Query 023191
Match_columns 286
No_of_seqs 238 out of 2662
Neff 9.2
Searched_HMMs 29240
Date Mon Mar 25 17:52:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023191.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/023191hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ou5_A Serine hydroxymethyltra 100.0 9.4E-47 3.2E-51 338.4 21.2 255 24-278 32-286 (490)
2 1rv3_A Serine hydroxymethyltra 100.0 9.5E-40 3.3E-44 304.3 22.7 256 19-274 17-272 (483)
3 2a7v_A Serine hydroxymethyltra 100.0 5.8E-39 2E-43 298.0 20.3 250 25-274 33-282 (490)
4 3h7f_A Serine hydroxymethyltra 100.0 1.5E-32 5.3E-37 253.3 21.9 250 21-279 20-269 (447)
5 3n0l_A Serine hydroxymethyltra 100.0 5.5E-32 1.9E-36 246.3 21.6 244 26-279 5-249 (417)
6 3gbx_A Serine hydroxymethyltra 100.0 1.2E-30 4E-35 237.6 20.4 247 22-278 4-255 (420)
7 3ecd_A Serine hydroxymethyltra 100.0 2.1E-30 7.3E-35 236.2 20.1 250 20-278 6-256 (425)
8 2vi8_A Serine hydroxymethyltra 100.0 3.6E-29 1.2E-33 226.8 21.5 245 26-279 3-247 (405)
9 2dkj_A Serine hydroxymethyltra 100.0 9E-29 3.1E-33 224.4 21.5 242 29-279 6-248 (407)
10 3zrp_A Serine-pyruvate aminotr 99.9 3.6E-24 1.2E-28 192.1 17.5 203 49-278 4-210 (384)
11 3nnk_A Ureidoglycine-glyoxylat 99.9 5.8E-24 2E-28 192.8 18.5 206 48-280 14-223 (411)
12 1vjo_A Alanine--glyoxylate ami 99.9 5.9E-24 2E-28 191.8 18.2 204 49-279 36-243 (393)
13 2huf_A Alanine glyoxylate amin 99.9 7.1E-24 2.4E-28 191.2 18.6 206 47-279 19-228 (393)
14 3isl_A Purine catabolism prote 99.9 1.6E-23 5.6E-28 190.1 19.4 205 48-279 12-220 (416)
15 2dr1_A PH1308 protein, 386AA l 99.9 1.7E-23 5.8E-28 188.0 19.0 200 52-278 25-229 (386)
16 3kgw_A Alanine-glyoxylate amin 99.9 2E-23 6.7E-28 187.9 18.2 206 48-280 24-233 (393)
17 1b5p_A Protein (aspartate amin 99.9 9.3E-24 3.2E-28 190.6 16.0 236 23-279 4-257 (385)
18 2ch1_A 3-hydroxykynurenine tra 99.9 2.8E-23 9.5E-28 187.5 18.7 205 48-279 19-227 (396)
19 3f0h_A Aminotransferase; RER07 99.9 1.3E-23 4.3E-28 188.5 16.2 207 47-280 19-229 (376)
20 3lvm_A Cysteine desulfurase; s 99.9 1.5E-23 5.1E-28 191.0 16.6 216 45-279 20-246 (423)
21 4hvk_A Probable cysteine desul 99.9 5E-24 1.7E-28 190.7 11.7 198 56-274 10-215 (382)
22 2z9v_A Aspartate aminotransfer 99.9 3.6E-23 1.2E-27 186.5 17.2 203 49-279 10-218 (392)
23 1gd9_A Aspartate aminotransfer 99.9 2.3E-23 7.7E-28 187.9 14.8 235 26-279 6-256 (389)
24 1o4s_A Aspartate aminotransfer 99.9 1.8E-23 6.2E-28 188.9 13.8 214 47-279 42-269 (389)
25 1kmj_A Selenocysteine lyase; p 99.9 1.9E-23 6.6E-28 188.7 13.1 214 48-279 24-247 (406)
26 1j32_A Aspartate aminotransfer 99.9 6.5E-23 2.2E-27 184.8 16.2 215 46-279 30-260 (388)
27 2e7j_A SEP-tRNA:Cys-tRNA synth 99.9 1.4E-23 4.8E-28 187.7 11.6 209 47-277 8-229 (371)
28 1iug_A Putative aspartate amin 99.9 2.6E-23 8.7E-28 184.6 13.1 196 49-276 3-204 (352)
29 1eg5_A Aminotransferase; PLP-d 99.9 5.4E-23 1.8E-27 184.5 15.2 205 50-274 4-219 (384)
30 2yrr_A Aminotransferase, class 99.9 7.7E-23 2.6E-27 181.2 15.9 203 49-279 2-208 (353)
31 3h14_A Aminotransferase, class 99.9 1.7E-22 5.7E-27 182.4 18.2 211 46-279 31-253 (391)
32 1m32_A 2-aminoethylphosphonate 99.9 1.3E-22 4.4E-27 180.6 16.8 205 48-279 5-215 (366)
33 3ele_A Amino transferase; RER0 99.9 1.5E-22 5E-27 183.1 17.3 214 46-276 35-268 (398)
34 2o0r_A RV0858C (N-succinyldiam 99.9 5.9E-23 2E-27 186.8 14.6 237 24-279 4-256 (411)
35 4eb5_A Probable cysteine desul 99.9 2.7E-23 9.2E-28 186.4 12.1 198 56-274 10-215 (382)
36 1yiz_A Kynurenine aminotransfe 99.9 7.8E-23 2.7E-27 186.9 15.3 252 1-279 1-278 (429)
37 2z61_A Probable aspartate amin 99.9 1.3E-22 4.4E-27 181.8 16.1 205 47-279 30-245 (370)
38 2bkw_A Alanine-glyoxylate amin 99.9 2.2E-22 7.6E-27 180.6 17.7 203 47-276 5-220 (385)
39 1elu_A L-cysteine/L-cystine C- 99.9 3.4E-23 1.2E-27 186.3 12.2 216 47-279 16-242 (390)
40 2x5d_A Probable aminotransfera 99.9 1.4E-22 4.8E-27 184.3 16.1 237 23-279 10-268 (412)
41 3f9t_A TDC, L-tyrosine decarbo 99.9 3.3E-22 1.1E-26 179.8 18.2 201 51-273 35-262 (397)
42 3cai_A Possible aminotransfera 99.9 3.1E-23 1.1E-27 187.9 11.5 214 48-279 27-248 (406)
43 1u08_A Hypothetical aminotrans 99.9 2.2E-22 7.5E-27 181.3 16.9 235 24-279 9-259 (386)
44 1t3i_A Probable cysteine desul 99.9 1E-22 3.5E-27 184.9 14.7 212 48-279 29-252 (420)
45 3vax_A Putative uncharacterize 99.9 2E-23 6.7E-28 188.7 9.5 205 47-272 20-235 (400)
46 1xi9_A Putative transaminase; 99.9 1E-22 3.5E-27 184.8 13.2 214 46-279 38-274 (406)
47 3a9z_A Selenocysteine lyase; P 99.9 5.3E-23 1.8E-27 188.1 11.1 214 47-274 18-262 (432)
48 3hvy_A Cystathionine beta-lyas 99.9 1.4E-22 4.8E-27 185.2 13.5 228 29-280 15-269 (427)
49 2dou_A Probable N-succinyldiam 99.9 2.1E-22 7E-27 180.9 14.0 227 33-279 8-253 (376)
50 3jtx_A Aminotransferase; NP_28 99.9 2.9E-22 1E-26 180.9 14.8 232 26-279 5-268 (396)
51 3ffh_A Histidinol-phosphate am 99.9 6.8E-22 2.3E-26 176.6 16.9 227 23-280 6-249 (363)
52 1v2d_A Glutamine aminotransfer 99.9 2.4E-22 8.1E-27 180.8 13.8 228 24-279 4-245 (381)
53 3dzz_A Putative pyridoxal 5'-p 99.9 2.3E-22 8E-27 181.0 13.1 214 47-279 28-258 (391)
54 3nra_A Aspartate aminotransfer 99.9 6.5E-22 2.2E-26 179.1 16.1 216 48-279 41-276 (407)
55 3b46_A Aminotransferase BNA3; 99.9 1.9E-22 6.4E-27 185.7 12.4 233 30-279 33-298 (447)
56 3fvs_A Kynurenine--oxoglutarat 99.9 1.6E-22 5.3E-27 184.3 10.9 241 23-279 6-270 (422)
57 2dgk_A GAD-beta, GADB, glutama 99.9 2.6E-21 8.8E-26 178.4 18.5 197 57-273 53-278 (452)
58 3vp6_A Glutamate decarboxylase 99.9 1.5E-21 5E-26 182.8 17.0 177 84-273 127-332 (511)
59 2gb3_A Aspartate aminotransfer 99.9 7.6E-22 2.6E-26 179.4 14.5 213 46-279 43-268 (409)
60 1svv_A Threonine aldolase; str 99.9 1.4E-21 4.7E-26 173.7 15.8 206 47-278 14-236 (359)
61 3get_A Histidinol-phosphate am 99.9 2.4E-22 8.3E-27 179.6 11.0 205 46-279 30-250 (365)
62 3ly1_A Putative histidinol-pho 99.9 1.5E-21 5E-26 173.7 15.7 205 47-280 17-237 (354)
63 3i16_A Aluminum resistance pro 99.9 8.2E-22 2.8E-26 180.1 14.1 173 96-280 77-269 (427)
64 3g0t_A Putative aminotransfera 99.9 1.9E-21 6.6E-26 177.8 16.0 213 46-276 44-280 (437)
65 2o1b_A Aminotransferase, class 99.9 2E-22 6.8E-27 183.1 9.3 238 24-279 23-276 (404)
66 2zc0_A Alanine glyoxylate tran 99.9 3.6E-21 1.2E-25 174.5 17.3 238 22-279 6-269 (407)
67 3cq5_A Histidinol-phosphate am 99.9 4.5E-21 1.5E-25 171.9 17.6 215 48-280 32-255 (369)
68 3aow_A Putative uncharacterize 99.9 1.8E-21 6.3E-26 179.3 15.2 244 16-279 47-311 (448)
69 3ffr_A Phosphoserine aminotran 99.9 6.5E-22 2.2E-26 176.0 11.7 205 47-279 4-213 (362)
70 3e9k_A Kynureninase; kynurenin 99.9 1.3E-22 4.4E-27 187.6 7.2 173 93-279 112-299 (465)
71 3e2y_A Kynurenine-oxoglutarate 99.9 2.3E-22 7.8E-27 182.4 8.6 237 26-279 4-263 (410)
72 3hbx_A GAD 1, glutamate decarb 99.9 6.7E-21 2.3E-25 178.0 18.7 199 56-273 66-293 (502)
73 4dq6_A Putative pyridoxal phos 99.9 1.2E-21 4.2E-26 176.2 12.9 210 46-279 32-262 (391)
74 3kki_A CAI-1 autoinducer synth 99.9 9.6E-21 3.3E-25 172.0 18.7 226 28-280 24-277 (409)
75 3tqx_A 2-amino-3-ketobutyrate 99.9 1.1E-21 3.9E-26 176.9 12.5 207 48-280 45-267 (399)
76 3p1t_A Putative histidinol-pho 99.9 7.3E-21 2.5E-25 167.9 16.0 201 46-281 16-223 (337)
77 3euc_A Histidinol-phosphate am 99.9 4.6E-21 1.6E-25 171.4 14.9 207 47-280 31-250 (367)
78 3ezs_A Aminotransferase ASPB; 99.9 5.7E-21 2E-25 171.2 15.4 226 31-279 5-254 (376)
79 3jzl_A Putative cystathionine 99.9 3.5E-21 1.2E-25 175.2 13.4 202 60-280 32-252 (409)
80 3kax_A Aminotransferase, class 99.9 2.4E-21 8.2E-26 173.9 12.0 211 47-279 25-254 (383)
81 3a2b_A Serine palmitoyltransfe 99.9 3.3E-21 1.1E-25 174.3 12.5 206 47-279 44-263 (398)
82 2w8t_A SPT, serine palmitoyltr 99.9 1.1E-20 3.9E-25 172.8 16.2 207 48-281 66-286 (427)
83 2jis_A Cysteine sulfinic acid 99.9 8.5E-21 2.9E-25 177.8 15.5 174 85-273 141-343 (515)
84 1b9h_A AHBA synthase, protein 99.9 8.1E-21 2.8E-25 171.2 14.8 187 59-274 16-205 (388)
85 3dr4_A Putative perosamine syn 99.8 2.6E-21 8.9E-26 174.7 11.5 196 46-273 22-221 (391)
86 1c7n_A Cystalysin; transferase 99.8 4E-21 1.4E-25 173.7 12.7 212 47-279 32-262 (399)
87 3ju7_A Putative PLP-dependent 99.8 6.5E-21 2.2E-25 171.9 13.7 195 49-273 5-206 (377)
88 3dyd_A Tyrosine aminotransfera 99.8 5.9E-21 2E-25 174.6 13.4 204 47-272 55-279 (427)
89 2r2n_A Kynurenine/alpha-aminoa 99.8 5.3E-21 1.8E-25 174.8 12.9 245 19-279 3-285 (425)
90 3l8a_A METC, putative aminotra 99.8 3.5E-21 1.2E-25 175.8 11.6 215 46-279 61-292 (421)
91 3mc6_A Sphingosine-1-phosphate 99.8 3.3E-21 1.1E-25 179.6 11.5 202 58-275 76-298 (497)
92 1d2f_A MALY protein; aminotran 99.8 9.7E-21 3.3E-25 170.8 14.2 213 47-279 29-257 (390)
93 1o69_A Aminotransferase; struc 99.8 2E-20 6.8E-25 169.3 16.2 194 55-278 7-205 (394)
94 3fdb_A Beta C-S lyase, putativ 99.8 1.8E-20 6E-25 168.0 15.7 210 46-280 23-248 (377)
95 4e1o_A HDC, histidine decarbox 99.8 1.4E-20 4.8E-25 174.9 15.4 197 59-273 92-325 (481)
96 1fc4_A 2-amino-3-ketobutyrate 99.8 6.8E-21 2.3E-25 172.3 12.8 207 47-279 46-268 (401)
97 3ht4_A Aluminum resistance pro 99.8 8.8E-21 3E-25 173.8 13.6 178 93-279 66-257 (431)
98 1bs0_A Protein (8-amino-7-oxon 99.8 1.9E-20 6.3E-25 168.5 15.5 206 47-279 40-256 (384)
99 3mad_A Sphingosine-1-phosphate 99.8 1.5E-20 5.2E-25 175.9 15.3 176 86-275 133-330 (514)
100 3rq1_A Aminotransferase class 99.8 5.9E-20 2E-24 167.2 18.6 230 28-279 15-288 (418)
101 2zyj_A Alpha-aminodipate amino 99.8 2.7E-21 9.2E-26 174.9 9.5 233 19-279 6-260 (397)
102 3if2_A Aminotransferase; YP_26 99.8 6.5E-21 2.2E-25 174.9 11.6 227 46-279 31-298 (444)
103 2c81_A Glutamine-2-deoxy-scyll 99.8 1.5E-20 5E-25 171.4 13.7 199 56-277 12-212 (418)
104 1mdo_A ARNB aminotransferase; 99.8 1.4E-20 4.8E-25 169.7 13.4 196 47-278 9-209 (393)
105 2okj_A Glutamate decarboxylase 99.8 2.8E-20 9.5E-25 173.8 15.7 176 85-273 125-329 (504)
106 1js3_A DDC;, DOPA decarboxylas 99.8 2.2E-20 7.7E-25 173.6 15.0 196 59-273 87-319 (486)
107 3qgu_A LL-diaminopimelate amin 99.8 3.5E-20 1.2E-24 170.3 16.1 208 47-276 70-302 (449)
108 4f4e_A Aromatic-amino-acid ami 99.8 9.9E-21 3.4E-25 172.7 12.4 231 23-270 24-283 (420)
109 1vp4_A Aminotransferase, putat 99.8 3.9E-21 1.3E-25 175.7 9.2 211 46-279 43-282 (425)
110 3k40_A Aromatic-L-amino-acid d 99.8 2E-20 6.7E-25 173.7 13.7 178 84-273 105-318 (475)
111 1jg8_A L-ALLO-threonine aldola 99.8 1E-20 3.5E-25 167.7 11.1 205 47-277 4-222 (347)
112 3tcm_A Alanine aminotransferas 99.8 5.6E-20 1.9E-24 171.6 16.3 221 45-279 94-344 (500)
113 1wyu_B Glycine dehydrogenase s 99.8 5.8E-20 2E-24 170.4 16.2 206 49-279 69-293 (474)
114 1iay_A ACC synthase 2, 1-amino 99.8 4.3E-20 1.5E-24 168.7 15.1 220 47-279 37-292 (428)
115 2fnu_A Aminotransferase; prote 99.8 2.4E-20 8.1E-25 166.9 13.1 189 54-276 7-202 (375)
116 1bw0_A TAT, protein (tyrosine 99.8 7E-20 2.4E-24 166.5 16.3 207 47-273 34-270 (416)
117 2qma_A Diaminobutyrate-pyruvat 99.8 4.6E-20 1.6E-24 172.0 15.3 198 57-274 111-342 (497)
118 2aeu_A Hypothetical protein MJ 99.8 6.5E-20 2.2E-24 165.1 15.7 193 47-279 29-229 (374)
119 1v72_A Aldolase; PLP-dependent 99.8 4.3E-20 1.5E-24 164.0 14.2 204 47-277 8-231 (356)
120 3frk_A QDTB; aminotransferase, 99.8 3.7E-21 1.3E-25 172.6 7.0 191 49-273 6-202 (373)
121 1qz9_A Kynureninase; kynurenin 99.8 2.2E-20 7.6E-25 169.6 11.9 206 48-279 29-250 (416)
122 3op7_A Aminotransferase class 99.8 3.4E-20 1.2E-24 166.2 12.2 177 85-281 60-247 (375)
123 3ihj_A Alanine aminotransferas 99.8 1.2E-19 4.2E-24 169.2 16.3 207 59-279 103-343 (498)
124 2po3_A 4-dehydrase; external a 99.8 6.4E-20 2.2E-24 167.5 14.0 195 50-278 20-221 (424)
125 3nyt_A Aminotransferase WBPE; 99.8 6.6E-21 2.3E-25 170.8 7.2 195 49-277 5-206 (367)
126 2c0r_A PSAT, phosphoserine ami 99.8 2.2E-20 7.4E-25 166.8 10.4 206 47-279 4-218 (362)
127 3uwc_A Nucleotide-sugar aminot 99.8 2.4E-20 8.2E-25 167.1 10.6 192 47-273 7-203 (374)
128 3t18_A Aminotransferase class 99.8 1.1E-19 3.7E-24 165.2 14.7 213 47-280 38-288 (413)
129 2oga_A Transaminase; PLP-depen 99.8 3.7E-20 1.3E-24 167.8 11.1 199 47-277 31-234 (399)
130 3b8x_A WBDK, pyridoxamine 5-ph 99.8 3.2E-19 1.1E-23 161.0 16.5 195 49-275 4-208 (390)
131 3ez1_A Aminotransferase MOCR f 99.8 7.9E-20 2.7E-24 166.6 12.6 230 25-280 5-276 (423)
132 3ei9_A LL-diaminopimelate amin 99.8 1.3E-19 4.3E-24 165.8 13.9 230 23-274 26-288 (432)
133 3piu_A 1-aminocyclopropane-1-c 99.8 1.6E-19 5.4E-24 165.4 14.3 220 47-279 39-297 (435)
134 1qgn_A Protein (cystathionine 99.8 4E-19 1.4E-23 163.3 16.9 161 95-278 117-284 (445)
135 2z67_A O-phosphoseryl-tRNA(SEC 99.8 1.6E-20 5.5E-25 173.3 7.4 172 90-276 131-318 (456)
136 1lc5_A COBD, L-threonine-O-3-p 99.8 3.8E-19 1.3E-23 158.9 15.5 203 47-279 25-240 (364)
137 3k7y_A Aspartate aminotransfer 99.8 5.3E-19 1.8E-23 160.7 16.6 226 25-270 6-263 (405)
138 3hdo_A Histidinol-phosphate am 99.8 1E-19 3.5E-24 162.4 11.5 200 47-280 27-238 (360)
139 3g7q_A Valine-pyruvate aminotr 99.8 4.3E-20 1.5E-24 167.7 8.5 223 46-280 31-273 (417)
140 1ibj_A CBL, cystathionine beta 99.8 2.4E-19 8.1E-24 165.8 13.3 205 47-279 90-303 (464)
141 2fq6_A Cystathionine beta-lyas 99.8 1.1E-19 3.6E-24 165.9 10.8 161 96-279 86-254 (415)
142 3ke3_A Putative serine-pyruvat 99.8 9E-20 3.1E-24 164.3 10.2 176 88-279 31-221 (379)
143 3fsl_A Aromatic-amino-acid ami 99.8 2.4E-19 8.3E-24 161.7 12.4 227 27-270 5-261 (397)
144 1pff_A Methionine gamma-lyase; 99.8 1.1E-19 3.7E-24 160.4 9.8 162 97-280 3-171 (331)
145 2rfv_A Methionine gamma-lyase; 99.8 3.6E-19 1.2E-23 161.3 13.3 162 93-276 65-231 (398)
146 3ppl_A Aspartate aminotransfer 99.8 1.6E-19 5.3E-24 165.0 10.9 227 29-280 17-283 (427)
147 7aat_A Aspartate aminotransfer 99.8 4E-19 1.4E-23 160.8 13.3 218 33-270 14-264 (401)
148 1fg7_A Histidinol phosphate am 99.8 2.8E-19 9.6E-24 159.6 12.1 196 47-279 30-237 (356)
149 1e5e_A MGL, methionine gamma-l 99.8 3E-19 1E-23 162.4 12.4 161 96-279 66-234 (404)
150 3d6k_A Putative aminotransfera 99.8 2.3E-19 8E-24 163.7 11.6 232 24-279 11-280 (422)
151 1w23_A Phosphoserine aminotran 99.8 3.3E-20 1.1E-24 165.2 5.6 202 48-279 4-217 (360)
152 3ndn_A O-succinylhomoserine su 99.8 6.6E-19 2.2E-23 160.6 13.7 160 94-275 83-247 (414)
153 1gc0_A Methionine gamma-lyase; 99.8 6.3E-19 2.1E-23 159.8 13.1 160 94-275 67-231 (398)
154 2x5f_A Aspartate_tyrosine_phen 99.8 2.3E-19 8E-24 163.9 10.3 214 46-279 47-297 (430)
155 1cs1_A CGS, protein (cystathio 99.8 1E-18 3.5E-23 157.6 14.4 161 96-278 56-222 (386)
156 3ftb_A Histidinol-phosphate am 99.8 1.7E-18 5.7E-23 154.2 15.0 202 46-281 26-241 (361)
157 3qm2_A Phosphoserine aminotran 99.8 1.9E-20 6.5E-25 169.0 2.4 206 47-275 27-239 (386)
158 3pj0_A LMO0305 protein; struct 99.8 1.2E-19 4.1E-24 161.6 7.5 204 47-279 14-229 (359)
159 3cog_A Cystathionine gamma-lya 99.8 1E-18 3.6E-23 158.8 13.1 158 97-278 72-237 (403)
160 2bwn_A 5-aminolevulinate synth 99.8 1.8E-18 6.1E-23 156.5 14.2 205 49-279 49-268 (401)
161 3b1d_A Betac-S lyase; HET: PLP 99.6 1.3E-20 4.4E-25 170.2 0.0 213 47-280 32-263 (392)
162 3ri6_A O-acetylhomoserine sulf 99.8 7.1E-19 2.4E-23 161.1 11.5 155 96-273 86-246 (430)
163 3f6t_A Aspartate aminotransfer 99.8 3.1E-19 1.1E-23 167.8 9.3 207 47-273 104-330 (533)
164 3asa_A LL-diaminopimelate amin 99.8 1.8E-18 6E-23 156.7 13.7 204 47-274 34-254 (400)
165 3acz_A Methionine gamma-lyase; 99.8 1.1E-18 3.9E-23 157.7 12.4 162 96-279 63-230 (389)
166 2cb1_A O-acetyl homoserine sul 99.8 1.5E-18 5.1E-23 158.0 13.1 154 95-272 59-218 (412)
167 3qhx_A Cystathionine gamma-syn 99.8 2.2E-18 7.7E-23 156.0 13.9 163 94-279 68-237 (392)
168 2ez2_A Beta-tyrosinase, tyrosi 99.8 5.3E-18 1.8E-22 156.1 16.6 188 58-277 56-277 (456)
169 2x3l_A ORN/Lys/Arg decarboxyla 99.8 3.7E-19 1.3E-23 163.8 8.5 161 96-276 61-230 (446)
170 2vyc_A Biodegradative arginine 99.8 2.9E-18 9.8E-23 166.9 15.1 163 96-273 209-402 (755)
171 1c4k_A Protein (ornithine deca 99.8 1.2E-18 4.2E-23 168.4 11.9 166 96-274 177-372 (730)
172 3e77_A Phosphoserine aminotran 99.8 1.9E-19 6.3E-24 161.8 5.3 200 53-276 19-225 (377)
173 1yaa_A Aspartate aminotransfer 99.8 1.5E-18 5.1E-23 157.6 11.2 226 25-269 6-267 (412)
174 4eu1_A Mitochondrial aspartate 99.8 4E-18 1.4E-22 154.7 13.7 234 17-273 10-278 (409)
175 1n8p_A Cystathionine gamma-lya 99.8 2.8E-18 9.5E-23 155.4 12.3 161 95-279 58-228 (393)
176 2ctz_A O-acetyl-L-homoserine s 99.8 3.8E-18 1.3E-22 155.9 12.9 154 96-271 62-221 (421)
177 1ajs_A Aspartate aminotransfer 99.8 9E-18 3.1E-22 152.4 15.3 233 23-273 5-278 (412)
178 3bb8_A CDP-4-keto-6-deoxy-D-gl 99.8 5.6E-18 1.9E-22 155.3 13.9 189 54-274 37-236 (437)
179 3lws_A Aromatic amino acid bet 99.8 1.9E-18 6.5E-23 153.8 10.5 206 48-279 12-227 (357)
180 2zy4_A L-aspartate beta-decarb 99.8 1.1E-18 3.8E-23 164.4 9.3 228 26-278 73-338 (546)
181 3m5u_A Phosphoserine aminotran 99.8 1.4E-18 4.9E-23 155.3 9.3 202 47-278 5-214 (361)
182 2q7w_A Aspartate aminotransfer 99.8 6.6E-18 2.2E-22 152.3 13.3 206 46-270 26-260 (396)
183 3meb_A Aspartate aminotransfer 99.8 2.2E-17 7.5E-22 152.0 17.0 226 21-270 23-293 (448)
184 2ay1_A Aroat, aromatic amino a 99.7 7.2E-18 2.5E-22 152.0 12.6 222 27-270 5-257 (394)
185 3fkd_A L-threonine-O-3-phospha 99.7 1.2E-17 4E-22 148.4 12.2 198 46-281 15-222 (350)
186 1wyu_A Glycine dehydrogenase ( 99.7 6.6E-18 2.2E-22 154.9 10.4 171 87-278 103-282 (438)
187 1uu1_A Histidinol-phosphate am 99.7 7.8E-18 2.7E-22 148.8 10.1 195 47-279 20-225 (335)
188 3bc8_A O-phosphoseryl-tRNA(SEC 99.7 1.2E-18 3.9E-23 158.9 4.6 174 88-272 94-281 (450)
189 1ax4_A Tryptophanase; tryptoph 99.7 7.4E-18 2.5E-22 155.5 8.9 193 60-277 55-287 (467)
190 3n75_A LDC, lysine decarboxyla 99.7 1.8E-17 6.2E-22 159.3 11.0 160 97-273 200-383 (715)
191 4h51_A Aspartate aminotransfer 99.7 2.9E-17 9.9E-22 149.7 11.5 242 17-276 15-285 (420)
192 3nmy_A Xometc, cystathionine g 99.7 3.6E-17 1.2E-21 148.4 11.2 161 96-278 71-238 (400)
193 2eh6_A Acoat, acetylornithine 99.7 4.3E-17 1.5E-21 145.9 11.3 209 47-280 29-264 (375)
194 1vef_A Acetylornithine/acetyl- 99.7 1.9E-17 6.5E-22 149.4 8.9 209 48-280 47-277 (395)
195 2oqx_A Tryptophanase; lyase, p 99.7 2.5E-17 8.5E-22 151.9 9.3 193 60-277 53-286 (467)
196 2fyf_A PSAT, phosphoserine ami 99.7 5.4E-17 1.8E-21 146.8 9.9 196 47-278 40-243 (398)
197 1s0a_A Adenosylmethionine-8-am 99.7 6E-16 2.1E-20 141.2 15.5 221 47-281 44-299 (429)
198 3hl2_A O-phosphoseryl-tRNA(SEC 99.7 1.8E-17 6.1E-22 149.8 3.3 166 96-273 121-300 (501)
199 3ruy_A Ornithine aminotransfer 99.7 3.9E-16 1.3E-20 140.6 12.1 197 58-280 53-275 (392)
200 2eo5_A 419AA long hypothetical 99.7 8.7E-16 3E-20 139.9 14.5 211 47-275 43-300 (419)
201 1sff_A 4-aminobutyrate aminotr 99.6 3.2E-15 1.1E-19 136.0 13.8 208 58-280 58-291 (426)
202 4adb_A Succinylornithine trans 99.6 1.3E-15 4.4E-20 137.7 10.2 197 58-281 56-276 (406)
203 3nx3_A Acoat, acetylornithine 99.6 7.1E-15 2.4E-19 132.5 14.7 208 48-281 38-273 (395)
204 3bwn_A AT1G70560, L-tryptophan 99.6 4.8E-16 1.7E-20 140.5 6.6 202 47-279 23-241 (391)
205 2oat_A Ornithine aminotransfer 99.6 3.6E-15 1.2E-19 136.8 11.7 197 58-280 93-316 (439)
206 2ord_A Acoat, acetylornithine 99.6 4.7E-15 1.6E-19 133.8 11.0 187 58-279 57-273 (397)
207 1z7d_A Ornithine aminotransfer 99.6 1.3E-14 4.5E-19 132.8 14.1 197 58-280 82-305 (433)
208 3dxv_A Alpha-amino-epsilon-cap 99.6 1.1E-14 3.9E-19 133.1 13.7 218 47-281 44-294 (439)
209 3i4j_A Aminotransferase, class 99.6 1.1E-14 3.7E-19 133.0 12.3 208 58-280 46-285 (430)
210 2pb2_A Acetylornithine/succiny 99.6 7E-15 2.4E-19 134.0 9.5 196 58-280 74-293 (420)
211 3a8u_X Omega-amino acid--pyruv 99.6 2.6E-14 8.7E-19 131.2 13.1 207 58-281 67-313 (449)
212 3n5m_A Adenosylmethionine-8-am 99.6 1.9E-13 6.6E-18 125.5 18.8 206 58-280 66-308 (452)
213 4a6r_A Omega transaminase; tra 99.5 1.8E-14 6E-19 132.9 11.3 207 58-279 67-311 (459)
214 3gju_A Putative aminotransfera 99.5 6.7E-14 2.3E-18 129.0 15.2 208 58-279 68-313 (460)
215 3l44_A Glutamate-1-semialdehyd 99.5 1E-13 3.5E-18 126.6 15.9 195 58-280 72-293 (434)
216 1zod_A DGD, 2,2-dialkylglycine 99.5 7.3E-14 2.5E-18 127.5 13.6 206 58-281 60-296 (433)
217 3fq8_A Glutamate-1-semialdehyd 99.5 1.1E-13 3.7E-18 126.2 14.3 205 47-280 53-290 (427)
218 2hox_A ALLIIN lyase 1; cystein 99.5 2E-15 6.8E-20 138.1 1.9 199 47-279 57-275 (427)
219 3dod_A Adenosylmethionine-8-am 99.5 1.7E-13 5.9E-18 125.8 14.4 205 58-280 61-304 (448)
220 2cy8_A D-phgat, D-phenylglycin 99.5 2E-13 6.7E-18 125.5 14.5 207 47-280 58-292 (453)
221 4e77_A Glutamate-1-semialdehyd 99.5 6E-13 2.1E-17 121.3 17.3 207 47-280 54-291 (429)
222 3i5t_A Aminotransferase; pyrid 99.5 3.4E-13 1.2E-17 124.9 15.7 208 58-280 71-315 (476)
223 3tfu_A Adenosylmethionine-8-am 99.5 4.7E-14 1.6E-18 130.1 9.4 206 58-279 92-326 (457)
224 2epj_A Glutamate-1-semialdehyd 99.5 3.6E-13 1.2E-17 123.1 14.7 207 47-280 57-294 (434)
225 3k28_A Glutamate-1-semialdehyd 99.5 5.7E-13 1.9E-17 121.6 15.8 206 47-280 54-291 (429)
226 3hmu_A Aminotransferase, class 99.5 1.9E-13 6.4E-18 126.6 12.3 205 58-279 72-315 (472)
227 2e7u_A Glutamate-1-semialdehyd 99.5 1.9E-13 6.4E-18 124.5 11.7 208 47-280 53-289 (424)
228 4ffc_A 4-aminobutyrate aminotr 99.4 5.7E-13 1.9E-17 122.6 12.8 210 58-281 81-318 (453)
229 3oks_A 4-aminobutyrate transam 99.4 2.7E-12 9.1E-17 118.0 16.2 210 58-281 78-320 (451)
230 2cjg_A L-lysine-epsilon aminot 99.4 6.1E-13 2.1E-17 122.3 11.1 199 58-277 71-316 (449)
231 1ohv_A 4-aminobutyrate aminotr 99.2 7.9E-11 2.7E-15 108.9 11.4 202 58-274 80-342 (472)
232 2yky_A Beta-transaminase; tran 98.8 1.7E-12 5.7E-17 119.7 0.0 204 47-280 101-323 (465)
233 4ao9_A Beta-phenylalanine amin 99.0 3.3E-09 1.1E-13 97.2 13.6 192 59-279 105-309 (454)
234 4atq_A 4-aminobutyrate transam 98.7 1.4E-06 4.8E-11 79.9 18.1 209 58-280 81-318 (456)
235 4e3q_A Pyruvate transaminase; 98.0 7.8E-05 2.7E-09 68.6 12.5 205 58-278 84-327 (473)
236 4a0g_A Adenosylmethionine-8-am 97.9 5.5E-05 1.9E-09 74.3 11.1 94 185-281 577-689 (831)
237 1iv0_A Hypothetical protein; r 56.6 29 0.00099 24.0 5.8 52 180-231 36-94 (98)
238 2yxb_A Coenzyme B12-dependent 54.4 16 0.00056 27.6 4.6 50 182-231 56-108 (161)
239 4gqr_A Pancreatic alpha-amylas 53.8 6.7 0.00023 35.2 2.6 27 205-231 72-98 (496)
240 1nu0_A Hypothetical protein YQ 52.2 26 0.00088 25.9 5.2 53 180-232 38-98 (138)
241 1y80_A Predicted cobalamin bin 51.5 28 0.00095 27.4 5.7 51 181-231 125-179 (210)
242 3noy_A 4-hydroxy-3-methylbut-2 51.4 11 0.00038 32.7 3.4 51 180-231 91-141 (366)
243 3bzy_B ESCU; auto cleavage pro 50.7 8.4 0.00029 25.9 2.1 20 212-231 29-48 (83)
244 3keo_A Redox-sensing transcrip 49.6 46 0.0016 26.5 6.7 45 184-233 137-182 (212)
245 4e84_A D-beta-D-heptose 7-phos 48.0 74 0.0025 27.2 8.3 37 195-231 186-222 (352)
246 2lbw_A H/ACA ribonucleoprotein 47.5 41 0.0014 24.1 5.6 52 184-236 25-77 (121)
247 1vhx_A Putative holliday junct 45.9 30 0.001 25.9 4.8 54 180-233 40-101 (150)
248 1ht6_A AMY1, alpha-amylase iso 45.0 12 0.0004 33.1 2.7 28 204-231 63-90 (405)
249 2ab1_A Hypothetical protein; H 44.5 62 0.0021 23.3 6.1 50 181-231 48-97 (122)
250 1lwj_A 4-alpha-glucanotransfer 43.9 13 0.00043 33.2 2.8 26 206-231 66-91 (441)
251 3bh4_A Alpha-amylase; calcium, 43.7 13 0.00044 33.6 2.8 28 204-231 73-100 (483)
252 1ud2_A Amylase, alpha-amylase; 43.2 13 0.00045 33.5 2.8 27 205-231 76-102 (480)
253 3j21_Z 50S ribosomal protein L 43.1 39 0.0013 23.1 4.7 43 184-228 20-62 (99)
254 3t7y_A YOP proteins translocat 43.1 12 0.00041 26.0 1.9 20 212-231 44-63 (97)
255 2vt1_B Surface presentation of 43.1 13 0.00044 25.6 2.1 20 212-231 29-48 (93)
256 1wpc_A Glucan 1,4-alpha-maltoh 43.0 13 0.00046 33.5 2.8 27 205-231 78-104 (485)
257 1g94_A Alpha-amylase; beta-alp 42.8 12 0.00043 33.4 2.6 27 205-231 60-86 (448)
258 1hvx_A Alpha-amylase; hydrolas 42.7 14 0.00046 33.8 2.8 28 204-231 76-103 (515)
259 3c01_E Surface presentation of 41.7 13 0.00044 25.9 1.9 20 212-231 29-48 (98)
260 3qvo_A NMRA family protein; st 41.4 1.3E+02 0.0043 23.6 8.4 91 115-224 25-117 (236)
261 1mxg_A Alpha amylase; hyperthe 41.2 15 0.00051 32.8 2.8 28 204-231 81-108 (435)
262 1gcy_A Glucan 1,4-alpha-maltot 41.1 16 0.00053 33.6 3.0 28 204-231 87-114 (527)
263 1xrs_B D-lysine 5,6-aminomutas 41.0 78 0.0027 26.1 6.9 51 181-231 166-223 (262)
264 4aie_A Glucan 1,6-alpha-glucos 40.5 15 0.00051 33.5 2.8 25 207-231 77-101 (549)
265 2guy_A Alpha-amylase A; (beta- 40.4 15 0.00053 33.0 2.8 28 204-231 92-119 (478)
266 3cpq_A 50S ribosomal protein L 39.8 46 0.0016 23.3 4.8 42 184-227 26-67 (110)
267 2rdx_A Mandelate racemase/muco 39.7 45 0.0016 28.9 5.7 51 180-230 245-295 (379)
268 2fym_A Enolase; RNA degradosom 39.4 50 0.0017 29.4 6.0 50 180-229 319-368 (431)
269 3v7e_A Ribosome-associated pro 39.2 30 0.001 22.9 3.4 44 184-229 16-59 (82)
270 1sjd_A N-acylamino acid racema 39.2 48 0.0016 28.6 5.8 49 181-229 242-290 (368)
271 2xzm_U Ribosomal protein L7AE 38.7 64 0.0022 23.3 5.4 52 184-236 29-81 (126)
272 1w41_A 50S ribosomal protein L 38.6 47 0.0016 22.8 4.6 43 184-228 21-63 (101)
273 3mio_A DHBP synthase, 3,4-dihy 38.6 61 0.0021 25.7 5.6 34 195-228 158-194 (206)
274 3e2i_A Thymidine kinase; Zn-bi 38.1 40 0.0014 27.1 4.6 34 195-229 101-134 (219)
275 1zco_A 2-dehydro-3-deoxyphosph 37.8 58 0.002 26.8 5.7 55 182-236 141-205 (262)
276 3q58_A N-acetylmannosamine-6-p 37.5 1.1E+02 0.0038 24.5 7.3 48 183-231 90-137 (229)
277 1wza_A Alpha-amylase A; hydrol 37.4 16 0.00055 33.0 2.4 26 206-231 78-103 (488)
278 3i4k_A Muconate lactonizing en 37.4 67 0.0023 27.9 6.4 50 181-230 254-303 (383)
279 1r0m_A N-acylamino acid racema 37.4 54 0.0018 28.4 5.8 48 181-228 248-295 (375)
280 1ccw_A Protein (glutamate muta 37.2 28 0.00095 25.5 3.3 50 182-231 41-93 (137)
281 1kcz_A Beta-methylaspartase; b 37.2 68 0.0023 28.2 6.5 57 171-229 302-358 (413)
282 3u5e_c L32, RP73, YL38, 60S ri 37.1 63 0.0021 22.4 5.0 43 184-228 27-69 (105)
283 2aaa_A Alpha-amylase; glycosid 37.0 18 0.0006 32.7 2.6 28 204-231 92-119 (484)
284 3igs_A N-acetylmannosamine-6-p 36.9 1.1E+02 0.0039 24.4 7.3 48 183-231 90-137 (232)
285 4a18_G RPL30; ribosome, eukary 36.4 67 0.0023 22.2 5.1 43 184-228 27-69 (104)
286 3kts_A Glycerol uptake operon 36.3 47 0.0016 26.1 4.6 42 183-228 18-59 (192)
287 1uhe_A Aspartate 1-decarboxyla 36.2 43 0.0015 23.1 3.8 14 192-205 73-86 (97)
288 2z1k_A (NEO)pullulanase; hydro 36.0 17 0.00057 32.7 2.3 26 206-231 93-118 (475)
289 3q45_A Mandelate racemase/muco 35.8 59 0.002 28.1 5.8 50 181-230 244-293 (368)
290 2ale_A SNU13, NHP2/L7AE family 35.7 48 0.0016 24.3 4.4 51 184-235 37-88 (134)
291 1vc3_B L-aspartate-alpha-decar 35.6 39 0.0013 23.3 3.5 14 192-205 75-88 (96)
292 2ovl_A Putative racemase; stru 35.5 44 0.0015 28.9 4.9 50 181-230 251-300 (371)
293 3on1_A BH2414 protein; structu 35.2 52 0.0018 22.6 4.3 43 184-228 23-65 (101)
294 3v7q_A Probable ribosomal prot 35.2 56 0.0019 22.5 4.5 43 184-228 24-66 (101)
295 1kko_A 3-methylaspartate ammon 35.2 62 0.0021 28.5 5.9 50 180-229 309-358 (413)
296 1tks_A 3,4-dihydroxy-2-butanon 35.2 55 0.0019 26.0 4.8 34 195-228 159-194 (204)
297 3ghf_A Septum site-determining 35.1 82 0.0028 22.5 5.5 46 182-227 25-78 (120)
298 3edf_A FSPCMD, cyclomaltodextr 34.6 21 0.00072 33.3 2.8 25 207-231 196-220 (601)
299 3si9_A DHDPS, dihydrodipicolin 34.4 71 0.0024 27.1 5.9 58 171-229 30-97 (315)
300 1jae_A Alpha-amylase; glycosid 34.2 15 0.00051 33.1 1.7 26 206-231 71-96 (471)
301 3dhu_A Alpha-amylase; structur 34.1 19 0.00064 32.1 2.3 25 207-231 81-105 (449)
302 3qtp_A Enolase 1; glycolysis, 33.9 74 0.0025 28.5 6.0 48 182-229 332-379 (441)
303 2dh2_A 4F2 cell-surface antige 33.9 20 0.00069 31.8 2.4 26 206-231 78-103 (424)
304 2xw6_A MGS, methylglyoxal synt 33.6 55 0.0019 24.0 4.4 46 186-231 65-113 (134)
305 3cpr_A Dihydrodipicolinate syn 33.5 1.2E+02 0.004 25.5 7.1 60 171-231 24-93 (304)
306 1xky_A Dihydrodipicolinate syn 33.1 1E+02 0.0036 25.7 6.7 56 174-230 23-88 (301)
307 1wuf_A Hypothetical protein LI 32.9 75 0.0026 27.7 6.0 49 181-229 261-309 (393)
308 1zja_A Trehalulose synthase; s 32.9 23 0.0008 32.6 2.8 25 207-231 77-101 (557)
309 1cyg_A Cyclodextrin glucanotra 32.7 23 0.00079 33.6 2.8 28 204-231 106-133 (680)
310 1g57_A DHBP synthase, 3,4-dihy 32.7 88 0.003 25.0 5.8 34 195-228 167-201 (217)
311 3b1s_B Flagellar biosynthetic 38.9 9.3 0.00032 26.0 0.0 20 212-231 29-48 (87)
312 2wc7_A Alpha amylase, catalyti 32.6 17 0.00058 32.9 1.7 26 206-231 99-124 (488)
313 1qho_A Alpha-amylase; glycosid 32.5 24 0.0008 33.6 2.8 28 204-231 102-129 (686)
314 1vmd_A MGS, methylglyoxal synt 32.5 90 0.0031 24.1 5.6 46 186-231 89-137 (178)
315 3l21_A DHDPS, dihydrodipicolin 32.3 1.3E+02 0.0043 25.3 7.1 59 171-230 23-91 (304)
316 3plx_B Aspartate 1-decarboxyla 32.2 92 0.0031 21.6 5.0 13 193-205 75-87 (102)
317 1chr_A Chloromuconate cycloiso 32.2 79 0.0027 27.3 6.0 50 181-230 248-297 (370)
318 3dz1_A Dihydrodipicolinate syn 32.0 1.2E+02 0.0041 25.5 6.9 62 166-228 11-81 (313)
319 1d3c_A Cyclodextrin glycosyltr 32.0 24 0.00083 33.5 2.8 28 204-231 110-137 (686)
320 1ua7_A Alpha-amylase; beta-alp 32.0 19 0.00064 31.9 1.9 27 205-231 70-96 (422)
321 3iz5_f 60S ribosomal protein L 31.9 70 0.0024 22.5 4.6 43 184-228 31-73 (112)
322 1w6t_A Enolase; bacterial infe 31.9 44 0.0015 29.9 4.3 49 181-229 332-380 (444)
323 1vs1_A 3-deoxy-7-phosphoheptul 31.6 89 0.003 26.0 5.9 58 179-236 152-220 (276)
324 2wkj_A N-acetylneuraminate lya 31.6 1.5E+02 0.0052 24.7 7.5 56 174-230 22-87 (303)
325 3ff4_A Uncharacterized protein 31.5 68 0.0023 23.0 4.5 36 186-227 74-109 (122)
326 3flu_A DHDPS, dihydrodipicolin 31.3 1.2E+02 0.0041 25.3 6.8 56 173-229 17-82 (297)
327 3bc9_A AMYB, alpha amylase, ca 31.2 25 0.00084 32.9 2.6 26 206-231 205-230 (599)
328 3bmv_A Cyclomaltodextrin gluca 31.1 26 0.00087 33.3 2.8 28 204-231 111-138 (683)
329 1m53_A Isomaltulose synthase; 31.1 22 0.00076 32.9 2.3 25 207-231 90-114 (570)
330 3aj7_A Oligo-1,6-glucosidase; 30.9 26 0.0009 32.6 2.8 25 207-231 85-109 (589)
331 3na8_A Putative dihydrodipicol 30.9 80 0.0027 26.7 5.6 58 171-229 32-99 (315)
332 1uok_A Oligo-1,6-glucosidase; 30.9 23 0.00077 32.7 2.3 25 207-231 76-100 (558)
333 3ezx_A MMCP 1, monomethylamine 30.6 60 0.002 25.8 4.5 51 181-231 129-185 (215)
334 1j0h_A Neopullulanase; beta-al 30.6 27 0.00092 32.5 2.8 24 208-231 221-244 (588)
335 2ze0_A Alpha-glucosidase; TIM 30.3 23 0.00079 32.6 2.3 25 207-231 76-100 (555)
336 2ps2_A Putative mandelate race 30.3 42 0.0014 29.0 3.9 50 181-230 248-297 (371)
337 4aef_A Neopullulanase (alpha-a 29.9 24 0.00081 33.2 2.3 49 183-231 237-307 (645)
338 2pa6_A Enolase; glycolysis, ly 29.8 47 0.0016 29.5 4.2 46 183-228 320-365 (427)
339 1n8f_A DAHP synthetase; (beta/ 29.5 52 0.0018 28.5 4.1 27 210-236 244-272 (350)
340 2qdd_A Mandelate racemase/muco 29.4 48 0.0016 28.7 4.1 50 181-230 246-295 (378)
341 1b93_A Protein (methylglyoxal 29.4 72 0.0025 24.0 4.5 46 186-231 73-121 (152)
342 2jli_A YSCU, YOP proteins tran 29.3 26 0.00089 25.4 1.9 20 212-231 73-92 (123)
343 2al1_A Enolase 1, 2-phospho-D- 29.3 50 0.0017 29.5 4.2 46 183-228 326-371 (436)
344 1xbi_A 50S ribosomal protein L 29.1 76 0.0026 22.6 4.4 51 184-235 34-85 (120)
345 1wzl_A Alpha-amylase II; pullu 29.0 28 0.00096 32.3 2.6 24 208-231 218-241 (585)
346 2pgw_A Muconate cycloisomerase 29.0 41 0.0014 29.3 3.5 50 181-230 250-299 (384)
347 2okt_A OSB synthetase, O-succi 28.9 74 0.0025 27.1 5.2 50 181-230 223-272 (342)
348 2zic_A Dextran glucosidase; TI 28.8 24 0.00083 32.4 2.1 24 208-231 77-100 (543)
349 1rlg_A 50S ribosomal protein L 28.8 95 0.0032 22.0 4.9 43 184-227 32-74 (119)
350 1f6k_A N-acetylneuraminate lya 28.2 1.6E+02 0.0054 24.5 7.0 56 174-230 14-80 (293)
351 2ioj_A Hypothetical protein AF 28.2 54 0.0019 23.8 3.6 37 187-228 66-103 (139)
352 2p8b_A Mandelate racemase/muco 28.1 54 0.0019 28.2 4.2 50 181-230 246-295 (369)
353 3jva_A Dipeptide epimerase; en 28.1 55 0.0019 28.1 4.2 51 181-231 243-293 (354)
354 3bzs_A ESCU; auto cleavage pro 28.1 28 0.00095 25.8 1.9 20 212-231 83-102 (137)
355 2akz_A Gamma enolase, neural; 28.0 54 0.0019 29.3 4.2 46 183-228 323-368 (439)
356 1snn_A DHBP synthase, 3,4-dihy 27.8 84 0.0029 25.3 4.8 34 195-228 178-212 (227)
357 1nu5_A Chloromuconate cycloiso 27.8 51 0.0018 28.4 4.0 50 181-230 248-297 (370)
358 1g5a_A Amylosucrase; glycosylt 27.7 32 0.0011 32.3 2.8 26 206-231 159-184 (628)
359 1rvk_A Isomerase/lactonizing e 27.6 45 0.0015 29.0 3.6 50 180-229 259-309 (382)
360 2ojp_A DHDPS, dihydrodipicolin 27.6 1.4E+02 0.005 24.7 6.7 57 174-231 12-78 (292)
361 3nvt_A 3-deoxy-D-arabino-heptu 27.5 76 0.0026 27.8 5.0 54 182-235 260-323 (385)
362 3pzt_A Endoglucanase; alpha/be 27.3 37 0.0013 28.8 2.9 51 181-231 68-126 (327)
363 1pqh_A Aspartate 1-decarboxyla 27.1 1E+02 0.0036 22.7 4.8 14 192-205 116-129 (143)
364 3dip_A Enolase; structural gen 27.1 1E+02 0.0035 27.1 5.8 49 181-229 274-322 (410)
365 4aee_A Alpha amylase, catalyti 27.0 28 0.00097 33.1 2.3 49 183-231 263-333 (696)
366 3hp4_A GDSL-esterase; psychrot 27.0 78 0.0027 23.4 4.6 47 183-230 91-143 (185)
367 3tak_A DHDPS, dihydrodipicolin 26.9 1.5E+02 0.0051 24.6 6.6 55 174-229 12-76 (291)
368 2qgy_A Enolase from the enviro 26.7 60 0.0021 28.3 4.2 52 180-231 253-304 (391)
369 1ea9_C Cyclomaltodextrinase; h 26.6 31 0.0011 32.0 2.4 49 183-231 170-240 (583)
370 2jlj_A YSCU, YOP proteins tran 26.5 31 0.0011 25.8 1.9 20 212-231 82-101 (144)
371 2r8w_A AGR_C_1641P; APC7498, d 26.5 1.6E+02 0.0053 25.1 6.7 55 174-229 45-109 (332)
372 3czg_A Sucrose hydrolase; (alp 26.3 30 0.001 32.6 2.3 24 208-231 154-177 (644)
373 1vr6_A Phospho-2-dehydro-3-deo 25.9 87 0.003 27.1 4.9 55 182-236 224-288 (350)
374 3qze_A DHDPS, dihydrodipicolin 25.8 1.4E+02 0.0048 25.2 6.3 56 173-229 33-98 (314)
375 2aif_A Ribosomal protein L7A; 25.7 78 0.0027 23.1 4.1 43 184-227 46-88 (135)
376 3qn3_A Enolase; structural gen 25.7 67 0.0023 28.5 4.3 46 184-229 317-362 (417)
377 2hzg_A Mandelate racemase/muco 25.4 62 0.0021 28.3 4.1 49 181-229 256-304 (401)
378 2fc3_A 50S ribosomal protein L 25.4 97 0.0033 22.1 4.5 43 184-227 33-75 (124)
379 7a3h_A Endoglucanase; hydrolas 25.4 43 0.0015 28.0 2.9 22 211-232 81-102 (303)
380 3s5o_A 4-hydroxy-2-oxoglutarat 25.3 1.3E+02 0.0045 25.2 6.0 55 174-229 25-89 (307)
381 3vup_A Beta-1,4-mannanase; TIM 25.3 45 0.0015 27.4 3.1 21 211-231 91-111 (351)
382 3gd6_A Muconate cycloisomerase 25.3 54 0.0018 28.7 3.7 50 181-230 247-296 (391)
383 1mdl_A Mandelate racemase; iso 25.3 37 0.0013 29.2 2.6 50 181-230 249-298 (359)
384 2d59_A Hypothetical protein PH 25.2 1.6E+02 0.0054 21.4 5.8 41 185-231 92-132 (144)
385 2poz_A Putative dehydratase; o 24.9 49 0.0017 28.9 3.3 49 181-229 259-307 (392)
386 2i2x_B MTAC, methyltransferase 24.8 92 0.0031 25.4 4.8 50 182-231 161-212 (258)
387 2zc8_A N-acylamino acid racema 24.6 56 0.0019 28.1 3.6 48 181-228 241-288 (369)
388 3zss_A Putative glucanohydrola 24.6 40 0.0014 32.2 2.8 24 209-232 320-343 (695)
389 1vq8_F 50S ribosomal protein L 24.6 1E+02 0.0035 21.8 4.5 51 184-235 34-85 (120)
390 3b0z_B Flagellar biosynthetic 30.2 16 0.00055 26.2 0.0 20 212-231 29-48 (114)
391 2whl_A Beta-mannanase, baman5; 24.2 46 0.0016 27.5 2.9 23 210-232 64-86 (294)
392 2qde_A Mandelate racemase/muco 24.2 54 0.0019 28.6 3.5 50 181-230 249-298 (397)
393 2duw_A Putative COA-binding pr 24.1 1.4E+02 0.0047 21.8 5.3 46 185-238 85-130 (145)
394 4dpp_A DHDPS 2, dihydrodipicol 23.9 2.2E+02 0.0075 24.6 7.2 55 174-229 70-134 (360)
395 1tkk_A Similar to chloromucona 23.9 57 0.0019 28.1 3.5 49 181-229 247-295 (366)
396 3eez_A Putative mandelate race 23.8 68 0.0023 27.9 4.0 50 181-230 246-295 (378)
397 1wue_A Mandelate racemase/muco 23.8 74 0.0025 27.7 4.2 49 181-229 261-309 (386)
398 1ivn_A Thioesterase I; hydrola 23.5 1.1E+02 0.0038 22.8 4.8 63 167-230 64-139 (190)
399 1tvn_A Cellulase, endoglucanas 23.5 52 0.0018 27.1 3.1 21 212-232 81-101 (293)
400 3jug_A Beta-mannanase; TIM-bar 23.4 48 0.0017 28.5 2.9 25 209-233 86-110 (345)
401 3o85_A Ribosomal protein L7AE; 23.2 1.1E+02 0.0039 21.7 4.5 50 184-235 36-87 (122)
402 1g01_A Endoglucanase; alpha/be 23.0 52 0.0018 28.3 3.1 22 211-232 91-112 (364)
403 4dxk_A Mandelate racemase / mu 23.0 85 0.0029 27.5 4.5 49 181-229 270-318 (400)
404 1bqc_A Protein (beta-mannanase 23.0 53 0.0018 27.2 3.1 21 211-231 66-86 (302)
405 3fcp_A L-Ala-D/L-Glu epimerase 23.0 87 0.003 27.2 4.5 50 181-230 253-302 (381)
406 3rjt_A Lipolytic protein G-D-S 22.9 1.6E+02 0.0053 22.1 5.7 47 183-230 118-174 (216)
407 3w01_A Heptaprenylglyceryl pho 22.8 1.3E+02 0.0046 24.3 5.2 52 175-228 18-69 (235)
408 3mwc_A Mandelate racemase/muco 22.4 78 0.0027 27.8 4.1 50 181-230 264-313 (400)
409 2ptz_A Enolase; lyase, glycoly 22.4 80 0.0027 28.1 4.2 48 182-229 326-373 (432)
410 1k4i_A 3,4-dihydroxy-2-butanon 22.4 1.1E+02 0.0037 24.8 4.5 22 207-228 191-212 (233)
411 2oz8_A MLL7089 protein; struct 22.3 1.1E+02 0.0037 26.6 5.0 43 183-229 254-296 (389)
412 3e48_A Putative nucleoside-dip 22.3 2.6E+02 0.0089 22.3 7.3 40 183-224 55-98 (289)
413 2gdq_A YITF; mandelate racemas 22.2 63 0.0022 28.1 3.5 49 181-229 245-293 (382)
414 3i6e_A Muconate cycloisomerase 22.2 81 0.0028 27.4 4.2 50 181-230 252-301 (385)
415 3tpc_A Short chain alcohol deh 22.1 2E+02 0.0068 22.8 6.4 28 116-143 10-38 (257)
416 2o56_A Putative mandelate race 22.1 49 0.0017 29.0 2.8 49 181-229 275-323 (407)
417 4hty_A Cellulase; (alpha/beta) 22.0 56 0.0019 28.0 3.1 21 211-231 122-142 (359)
418 3ozy_A Putative mandelate race 22.0 74 0.0025 27.7 3.9 49 181-229 256-304 (389)
419 3i6i_A Putative leucoanthocyan 21.9 3E+02 0.01 22.8 7.8 100 116-227 13-115 (346)
420 2gl5_A Putative dehydratase pr 21.8 54 0.0018 28.8 3.0 49 181-229 278-326 (410)
421 3uj2_A Enolase 1; enzyme funct 21.8 68 0.0023 28.8 3.6 47 183-229 344-390 (449)
422 3aie_A Glucosyltransferase-SI; 21.7 48 0.0016 32.4 2.7 24 208-231 691-714 (844)
423 4dwd_A Mandelate racemase/muco 21.6 63 0.0021 28.3 3.3 51 180-231 250-300 (393)
424 1egz_A Endoglucanase Z, EGZ, C 21.6 59 0.002 26.7 3.1 21 211-231 78-98 (291)
425 2j9r_A Thymidine kinase; TK1, 21.6 1.1E+02 0.0037 24.4 4.4 33 195-228 101-133 (214)
426 3otr_A Enolase; structural gen 21.5 91 0.0031 28.0 4.3 48 182-229 335-382 (452)
427 3dgb_A Muconate cycloisomerase 21.4 83 0.0028 27.3 4.1 50 181-230 254-303 (382)
428 2v9d_A YAGE; dihydrodipicolini 21.3 1.5E+02 0.0052 25.3 5.6 56 174-230 42-107 (343)
429 2csu_A 457AA long hypothetical 21.2 1.3E+02 0.0046 26.8 5.5 51 184-237 78-133 (457)
430 2bhu_A Maltooligosyltrehalose 21.1 44 0.0015 31.2 2.3 24 208-231 191-214 (602)
431 3fv9_G Mandelate racemase/muco 21.1 81 0.0028 27.5 3.9 50 181-230 252-301 (386)
432 1y81_A Conserved hypothetical 20.9 1.6E+02 0.0055 21.2 5.0 43 187-237 86-128 (138)
433 3ucq_A Amylosucrase; thermosta 20.9 44 0.0015 31.5 2.3 27 205-231 156-182 (655)
434 2pcq_A Putative dihydrodipicol 20.8 48 0.0017 27.6 2.3 53 174-229 9-68 (283)
435 3tqp_A Enolase; energy metabol 20.7 73 0.0025 28.4 3.6 47 183-229 318-364 (428)
436 2cks_A Endoglucanase E-5; carb 20.6 60 0.0021 27.0 2.9 21 211-231 81-101 (306)
437 3rr1_A GALD, putative D-galact 20.4 82 0.0028 27.7 3.9 50 181-230 238-287 (405)
438 1m7x_A 1,4-alpha-glucan branch 20.4 47 0.0016 31.1 2.3 24 208-231 203-226 (617)
439 3ro6_B Putative chloromuconate 20.4 75 0.0026 27.3 3.5 50 181-230 244-294 (356)
440 3qld_A Mandelate racemase/muco 20.3 94 0.0032 27.1 4.2 50 181-230 249-298 (388)
441 3a5f_A Dihydrodipicolinate syn 20.3 2.2E+02 0.0075 23.5 6.3 56 174-231 13-78 (291)
442 3m07_A Putative alpha amylase; 20.1 56 0.0019 30.6 2.8 23 209-231 202-224 (618)
443 3m1a_A Putative dehydrogenase; 20.0 1.9E+02 0.0065 23.2 5.9 29 115-143 7-36 (281)
No 1
>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}
Probab=100.00 E-value=9.4e-47 Score=338.42 Aligned_cols=255 Identities=66% Similarity=1.107 Sum_probs=208.2
Q ss_pred cccccccChHHHHHHHHHHHHHHcCceecCCCCCCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHH
Q 023191 24 NAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALE 103 (286)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~i~L~~~e~~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 103 (286)
++.++..+|+++..+.+|..|+...|+|+++||++|+.|++++...+.++|.+|||+.+||++++.++++|..++++.++
T Consensus 32 ~~~l~~~Dpei~~~i~~E~~RQ~~~ieLIASEN~~S~aV~~a~gS~ltnKYaEGyPg~RyYgGce~vD~iE~la~~rak~ 111 (490)
T 3ou5_A 32 QESLSDSDPEMWELLQREKDRQCRGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALE 111 (490)
T ss_dssp CCCHHHHCHHHHHHHHHHHHHHHHSEECCTTCCCCCHHHHHHHTSGGGTCCCCC----------CHHHHHHHHHHHHHHH
T ss_pred ccchhhhCHHHHHHHHHHHHHHHcCceEecCCCcCCHHHHHHhcCcccccccCCCCCccccCCChHHHHHHHHHHHHHHH
Confidence 67889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HCCCCCCCcceeEEeCCChHHHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCC
Q 023191 104 AFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYID 183 (286)
Q Consensus 104 ~~g~~~~~~~~~v~~~sG~~a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d 183 (286)
+||+++..|+++|++.||+.||++++.++++|||+|+..+..+++|++.++......+.+.|..+..++++++++++.+|
T Consensus 112 lF~a~~A~w~VNVQP~SGs~AN~avy~All~PGD~ilg~~l~~GGHltHg~~~~~~~v~~sg~~~~~~~Y~vd~~t~~ID 191 (490)
T 3ou5_A 112 AFDLDPAQWGVNVQPYSGSPANLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNPKTGLID 191 (490)
T ss_dssp HTTCCTTTEEEECCCSSHHHHHHHHHHHHCC-CCCEECBC----------------------------CBCEETTTTEEC
T ss_pred HhCCCccccCCCCCcCCHHHHHHHHHHHHcCCCCEEEecccCCCCcccccccCCCcccccccccccccccccCCCCCccc
Confidence 99999999999999999999999999999999999999999999999988755444566778888889999998889999
Q ss_pred HHHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCCcceEEEeCCCCCCCCC
Q 023191 184 YDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGP 263 (286)
Q Consensus 184 ~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp 263 (286)
+|+++++..+++||+|+++.|.+++..|++++.+||++.|+++++|.||.+|++..+.+++|++++|++++|+||+|.||
T Consensus 192 yd~~~~~A~~~kPklIi~G~SaY~r~id~~~~reIAd~vGA~Lm~DmAHiaGLVA~g~~psP~~~ADvVTtTTHKTLrGP 271 (490)
T 3ou5_A 192 YNQLALTARLFRPRLIIAGTSAYARLIDYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFKHADIVTTTTHKTLRGA 271 (490)
T ss_dssp HHHHHHHHHHHCCSEEEECCSSCCSCCCHHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGGGTCSEEEEESSSTTCSC
T ss_pred HHHHHHHHhhcCCCeEEECCccCccccCHHHHHHHHhhcccEEEechhhhhhhhcccccCCccccceEEeccccccccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceEEEEecchhhhh
Q 023191 264 RGAMIFFRKGVKEIN 278 (286)
Q Consensus 264 ~gG~l~~~~~~~~~~ 278 (286)
+||+|++|++....+
T Consensus 272 rGG~Il~~~~~~~~~ 286 (490)
T 3ou5_A 272 RSGLIFYRKGVKAVD 286 (490)
T ss_dssp SCEEEEEECSEEEEC
T ss_pred CceEEEecccccccc
Confidence 999999999765443
No 2
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=100.00 E-value=9.5e-40 Score=304.29 Aligned_cols=256 Identities=64% Similarity=1.057 Sum_probs=228.6
Q ss_pred chhhccccccccChHHHHHHHHHHHHHHcCceecCCCCCCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHH
Q 023191 19 WPKQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQ 98 (286)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~L~~~e~~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 98 (286)
..+++++++..++++++..+..+..++.+.|+|+++++++|+.|++++.+.+.+.|.+||++.++|++....+++++.++
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~L~a~e~~~~~~V~eA~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~ 96 (483)
T 1rv3_A 17 HEQMLAQPLKDSDAEVYDIIKKESNRQRVGLELIASENFASRAVLEALGSCLNNKYSLGYPGQRYYGGTEHIDELETLCQ 96 (483)
T ss_dssp HHHHTTSCHHHHCHHHHHHHHHHHHHHHSSEECCTTCCCCCHHHHHHHTSGGGTCCCCEETTEESSSCCHHHHHHHHHHH
T ss_pred HHHHHhhhhhhcCHHHHHHHHHHHHHhhcCeEEEcCCCCCCHHHHHHHHHHHhccCcccCCCccccCcchhHHHHHHHHH
Confidence 46667788889999999999998888888999999999999999999999999888888999889999899999999999
Q ss_pred HHHHHHCCCCCCCcceeEEeCCChHHHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCC
Q 023191 99 KRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNES 178 (286)
Q Consensus 99 ~~~~~~~g~~~~~~~~~v~~~sG~~a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~ 178 (286)
+++++++|+++++|.++|++++|+.++++++.++++|||+|+++++.|+++..+++..++.++.+.|..++.++++++++
T Consensus 97 ~~~a~~~g~~~~~~~~~V~~~sGs~an~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~G~~~~~v~~~~~~~ 176 (483)
T 1rv3_A 97 KRALQAYGLDPQCWGVNVQPYSGSPANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMAYKVNPD 176 (483)
T ss_dssp HHHHHHTTCCTTTEEEECCCSSHHHHHHHHHHHHTCTTCEEEEECGGGTCCGGGCCBCSSCBCSHHHHHSEEEEECBCTT
T ss_pred HHHHHHhCCCcccCceEEEECCcHHHHHHHHHHhcCCCCEEEEecCccCcCcchhhhhcccCcccccceEEEEECccccC
Confidence 99999999987655567999999988887799999999999999999999999988877777778887677788776766
Q ss_pred CCCCCHHHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCCcceEEEeCCCC
Q 023191 179 TGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHK 258 (286)
Q Consensus 179 ~~~~d~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K 258 (286)
++.+|+++|++++++.+||+|+++++|++...|+++|.++|+++|+++|+|++|+.|.+..+..+.++.++|++++|+||
T Consensus 177 ~~~iD~d~le~~i~~~~tklIi~~~sn~~~~~dl~~i~~ia~~~g~~livD~ah~~g~~~~~~~~~p~~~~div~~s~~K 256 (483)
T 1rv3_A 177 TGYIDYDRLEENARLFHPKLIIAGTSCYSRNLDYGRLRKIADENGAYLMADMAHISGLVVAGVVPSPFEHCHVVTTTTHK 256 (483)
T ss_dssp TCSBCHHHHHHHHHHHCCSEEEECCSSCCSCCCHHHHHHHHHHTTCEEEEECTTTHHHHHHTSSCCGGGTCSEEEEESSG
T ss_pred CCcCCHHHHHHHHhhcCCcEEEEeCCcCCCcCCHHHHHHHHHHcCCEEEEEccchhcccccCCCCCCCCCCcEEEecCcc
Confidence 78999999999998449999999777766888999999999999999999999999998878777766679999999999
Q ss_pred CCCCCCceEEEEecch
Q 023191 259 SLRGPRGAMIFFRKGV 274 (286)
Q Consensus 259 ~l~gp~gG~l~~~~~~ 274 (286)
+|+||+||++++++++
T Consensus 257 ~l~GprgG~i~~~~~~ 272 (483)
T 1rv3_A 257 TLRGCRAGMIFYRRGV 272 (483)
T ss_dssp GGCCCSCEEEEEECSB
T ss_pred cCCCCCceEEEEcchh
Confidence 9999999999999864
No 3
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=100.00 E-value=5.8e-39 Score=297.97 Aligned_cols=250 Identities=67% Similarity=1.117 Sum_probs=187.3
Q ss_pred ccccccChHHHHHHHHHHHHHHcCceecCCCCCCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHH
Q 023191 25 APLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEA 104 (286)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~i~L~~~e~~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 104 (286)
..++.++|+++..+.++..++.+.|+|+++++++|+.|++++.+.+.+.|.+||++.++|++.+..+++|+.++++++++
T Consensus 33 ~~l~~~d~~~~~~~~~e~~rq~~~i~lias~n~~~~~V~eA~~~~l~~~y~~G~~g~r~~~G~~~~~~lE~~a~~~~a~l 112 (490)
T 2a7v_A 33 ESLSDSDPEMWELLQREKDRQCRGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEA 112 (490)
T ss_dssp CCHHHHCHHHHHHHHHHHHHHHHSEECCTTCCCCCHHHHHHHTSGGGTCCCCC------------CTHHHHHHHHHHHHH
T ss_pred chhhhcCHHHHHHHHHHHHHHHcCceEECCCCCCCHHHHHHHHHHHcCCCccCCCcccccCccHHHHHHHHHHHHHHHHH
Confidence 57888999999999999999999999999999999999999999999989899999999999888889999999999999
Q ss_pred CCCCCCCcceeEEeCCChHHHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCH
Q 023191 105 FRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDY 184 (286)
Q Consensus 105 ~g~~~~~~~~~v~~~sG~~a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~ 184 (286)
||++.++|+++|++++|+.++.+++.++++|||+|+++++.|++++..++......+.+.|..++.++++++++++.+|+
T Consensus 113 ~g~~~~~~~~~v~~~sGt~An~~al~al~~pGD~Vl~~~~~h~g~l~h~~~~~~~~i~~~g~~~~~~~~~vd~~~~~iD~ 192 (490)
T 2a7v_A 113 FDLDPAQWGVNVQPYSGSPANLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNPKTGLIDY 192 (490)
T ss_dssp TTCCTTTEEEECCCSSHHHHHHHHHHHHCCSCEECCC-------------------------------CCBCTTTCSBCH
T ss_pred cCCCcccCceEEeCCchHHHHHHHHHHHcCCCCEecccCccccccccchhhhcchhHHHcCCeEEEEecccccccCCcCH
Confidence 99988665456677788779998999999999999999999998876554322223345666566677777766789999
Q ss_pred HHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCCcceEEEeCCCCCCCCCC
Q 023191 185 DQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPR 264 (286)
Q Consensus 185 e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~ 264 (286)
+++++++.+++||+|+++.+++|...|+++|.++|++||+++++|+||+.|.+..+..+.++.++|++++|+||+|+||+
T Consensus 193 d~le~~l~~~~~klIi~~~s~~~~~~dl~~i~~ia~~~g~~livD~Ah~~glv~~g~~~~~~~~aDiv~~S~hK~l~Gp~ 272 (490)
T 2a7v_A 193 NQLALTARLFRPRLIIAGTSAYARLIDYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFKHADIVTTTTHKTLRGAR 272 (490)
T ss_dssp HHHHHHHHHHCCSEEEECCSSCCSCCCHHHHHHHHHHTTCEEEEECGGGHHHHHTTSSCCGGGTCSEEEEESSGGGCSCS
T ss_pred HHHHHHHhhcCCcEEEEcCCCCCCcccHHHHHHHHHHcCCEEEEccccccccccCCcCCCCCCCCCEEEECCcccCcccc
Confidence 99999997668999988877889888999999999999999999999999988777666666679999999999999999
Q ss_pred ceEEEEecch
Q 023191 265 GAMIFFRKGV 274 (286)
Q Consensus 265 gG~l~~~~~~ 274 (286)
||++++++++
T Consensus 273 GG~i~~~~~~ 282 (490)
T 2a7v_A 273 SGLIFYRKGV 282 (490)
T ss_dssp CEEEEEECSE
T ss_pred chheeeccch
Confidence 9999999864
No 4
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.5e-32 Score=253.27 Aligned_cols=250 Identities=44% Similarity=0.719 Sum_probs=204.7
Q ss_pred hhccccccccChHHHHHHHHHHHHHHcCceecCCCCCCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHH
Q 023191 21 KQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKR 100 (286)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~L~~~e~~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 100 (286)
..+...+..++++++..+.++.+++.+.|+|.++++++++.+++++.+.+.+.|..+|++.++|.+....+.+++..+++
T Consensus 20 ~~~~~~l~~~~~~i~~~~~~~~~~~~~~i~l~~~~~~~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~~e~~a~~~ 99 (447)
T 3h7f_A 20 GSMSAPLAEVDPDIAELLAKELGRQRDTLEMIASENFVPRAVLQAQGSVLTNKYAEGLPGRRYYGGCEHVDVVENLARDR 99 (447)
T ss_dssp CGGGCCHHHHCHHHHHHHHHHHHHHHHSEECCTTCCCCCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHH
T ss_pred hhhHHHHHhCCHHHHHHHHHHHHHHhCceeEecCCCCCCHHHHHHHHHHhcCCccccCCcccccCccHHHHHHHHHHHHH
Confidence 56677888999999999998887878899999999999999999999999877877888888888888777777777799
Q ss_pred HHHHCCCCCCCcceeEEeCCChHHHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCC
Q 023191 101 ALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTG 180 (286)
Q Consensus 101 ~~~~~g~~~~~~~~~v~~~sG~~a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~ 180 (286)
+++++|++. +.+++++|+.++.+++.++++|||+|+++++.|.+++..+. .+.+.|..++.++++++++++
T Consensus 100 la~~~g~~~----~~v~~~sGs~a~~~a~~~~~~~Gd~Vl~~~~~~~~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~ 170 (447)
T 3h7f_A 100 AKALFGAEF----ANVQPHSGAQANAAVLHALMSPGERLLGLDLANGGHLTHGM-----RLNFSGKLYENGFYGVDPATH 170 (447)
T ss_dssp HHHHHTCSE----EECCCSSHHHHHHHHHHHHCCTTCEEEEECGGGTCCGGGTC-----TTSHHHHSSEEEEECCCTTTC
T ss_pred HHHHcCCCc----eEEEeCCHHHHHHHHHHHhcCCCCEEEecCcccccccchhh-----hhhhcCCeeEEEEcCcCcccC
Confidence 999999876 34557777668888999999999999999988877543332 122334445556666665678
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCCcceEEEeCCCCCC
Q 023191 181 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSL 260 (286)
Q Consensus 181 ~~d~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l 260 (286)
.+|++++++++.+.++++|+++.++++...++++|.++|++||+++|+|++|+.|....+.....+.++|++++|+||+|
T Consensus 171 ~~d~~~l~~~i~~~~~~~i~~~~~~~~~~~~l~~i~~l~~~~g~lli~Dea~~~g~~~~g~~~~~~~~~di~~~s~sK~l 250 (447)
T 3h7f_A 171 LIDMDAVRATALEFRPKVIIAGWSAYPRVLDFAAFRSIADEVGAKLLVDMAHFAGLVAAGLHPSPVPHADVVSTTVHKTL 250 (447)
T ss_dssp SCCHHHHHHHHHHHCCSEEEEECSSCCSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCSTTTCSEEEEESSGGG
T ss_pred CcCHHHHHHHHHhcCCeEEEEcCCCCCCccCHHHHHHHHHHcCCEEEEECCchhhhhcCCCCCCCCCCCcEEEecCCcCC
Confidence 89999999999765899999976666766699999999999999999999998887665555555557899999999999
Q ss_pred CCCCceEEEEecchhhhhc
Q 023191 261 RGPRGAMIFFRKGVKEINK 279 (286)
Q Consensus 261 ~gp~gG~l~~~~~~~~~~~ 279 (286)
+||+||++++++++.+..+
T Consensus 251 ~G~~gG~i~~~~~~~~~l~ 269 (447)
T 3h7f_A 251 GGGRSGLIVGKQQYAKAIN 269 (447)
T ss_dssp CCCSCEEEEECGGGHHHHH
T ss_pred CCCCeEEEEECHHHHHHHh
Confidence 9999999999988766544
No 5
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=100.00 E-value=5.5e-32 Score=246.26 Aligned_cols=244 Identities=48% Similarity=0.812 Sum_probs=194.3
Q ss_pred cccccChHHHHHHHHHHHHHHcCceecCCCCCCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHC
Q 023191 26 PLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAF 105 (286)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~i~L~~~e~~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 105 (286)
.++.++++++..+.++..++.+.++|.++++++++.+++++.+.+.+.+..+|++.++|.+....+++++.+++++++++
T Consensus 5 ~~~~~~~~i~~~~~~e~~~~~~~i~l~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~ 84 (417)
T 3n0l_A 5 SLEMFDKEIFDLTNKELERQCEGLEMIASENFTLPEVMEVMGSILTNKYAEGYPGKRYYGGCEFVDEIETLAIERCKKLF 84 (417)
T ss_dssp HHHHHCHHHHHHHHHHHHHHHHSEECCTTCCCCCHHHHHHHTBGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHH
T ss_pred chhhcCHHHHHHHHHHHHHHhcCeeeecccCCCCHHHHHHHhhhhhccccccCCCccccccchHHHHHHHHHHHHHHHHh
Confidence 45678999999998877777789999999999999999999999877677778887788888888899999999999999
Q ss_pred CCCCCCcceeEEeCCChHHHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHH
Q 023191 106 RLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYD 185 (286)
Q Consensus 106 g~~~~~~~~~v~~~sG~~a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e 185 (286)
|+++ .+|++++|+.++.+++.++++|||+|+++++.|.++..++.. ....|..+..++++.+ +++.+|++
T Consensus 85 g~~~----~~i~~~sGt~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~-----~~~~g~~~~~~~~~~~-~~~~~d~~ 154 (417)
T 3n0l_A 85 NCKF----ANVQPNSGSQANQGVYAALINPGDKILGMDLSHGGHLTHGAK-----VSSSGKMYESCFYGVE-LDGRIDYE 154 (417)
T ss_dssp TCSE----EECCCSSHHHHHHHHHHHHSCTTCEEEEECC---------------------CCSEEEEECCC-TTSSCCHH
T ss_pred CCCC----cceEeccHHHHHHHHHHHhcCCCCEEEecccccccccchhhh-----hhhhcceeeeEeccCC-CCCCcCHH
Confidence 9976 359999996688889999999999999999888776554432 2233444555666666 67889999
Q ss_pred HHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCCcceEEEeCCCCCCCCCCc
Q 023191 186 QLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG 265 (286)
Q Consensus 186 ~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~g 265 (286)
+|++++++.+|++|+++.+|+|...++++|.++|++||+++|+|++|+.|....+..+..+.++|++++|+||+|+||+|
T Consensus 155 ~l~~~i~~~~~~~v~~~~~~~G~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~~~di~~~s~sK~l~g~~~ 234 (417)
T 3n0l_A 155 KVREIAKKEKPKLIVCGASAYARVIDFAKFREIADEIGAYLFADIAHIAGLVVAGEHPSPFPYAHVVSSTTHKTLRGPRG 234 (417)
T ss_dssp HHHHHHHHHCCSEEEECCSSCCSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCCTTTCSEEEEESSTTTCSCSC
T ss_pred HHHHHHHhcCCeEEEECCcccCccCCHHHHHHHHHHcCCEEEEECccchhhhhcccCCCccccceEEEeeCccccCCCCe
Confidence 99999984489999988777899999999999999999999999999988876665555555689999999999999999
Q ss_pred eEEEEe-cchhhhhc
Q 023191 266 AMIFFR-KGVKEINK 279 (286)
Q Consensus 266 G~l~~~-~~~~~~~~ 279 (286)
|+++++ +++.+..+
T Consensus 235 G~~~~~~~~~~~~~~ 249 (417)
T 3n0l_A 235 GIIMTNDEELAKKIN 249 (417)
T ss_dssp EEEEESCHHHHHHHH
T ss_pred eEEEECCHHHHHHHh
Confidence 999998 46655443
No 6
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=99.97 E-value=1.2e-30 Score=237.55 Aligned_cols=247 Identities=47% Similarity=0.782 Sum_probs=183.6
Q ss_pred hcccc--ccccChHHHHHHHHHHHHHHcCceecCCCCCCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHH
Q 023191 22 QLNAP--LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQK 99 (286)
Q Consensus 22 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~L~~~e~~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 99 (286)
+|+.. ++..+++++..+.++..+..+.+.+.++++++++.+++++.+.+.+.+..++++.+++.+....+.+++.+++
T Consensus 4 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~n~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (420)
T 3gbx_A 4 MLKREMNIADYDAELWQAMEQEKVRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDVVEQLAID 83 (420)
T ss_dssp BCTTTCCHHHHCHHHHHHHHHHHHHHHHSEECCTTCCCCCHHHHHHHTSGGGGCCC--------------CHHHHHHHHH
T ss_pred HHhhhcchhhcCHHHHHHHHHHHHhhhcceeeeccCCCCCHHHHHHHHHHHhcccccCCCCccccCchHHHHHHHHHHHH
Confidence 45555 6788999999998887777788999999999999999999999866666677777777776666788888889
Q ss_pred HHHHHCCCCCCCcceeEEeCCChHHHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCC
Q 023191 100 RALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNEST 179 (286)
Q Consensus 100 ~~~~~~g~~~~~~~~~v~~~sG~~a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~ 179 (286)
++++++|+++ ..|++++|+.++.+++.++++|||+|++.++.|+++..++.. ....|..++.++++.+ ++
T Consensus 84 ~la~~~~~~~----~~v~~~sGs~a~~~a~~~~~~~gd~v~~~~~~~~~~~~~~~~-----~~~~g~~~~~~~~~~~-~~ 153 (420)
T 3gbx_A 84 RAKELFGADY----ANVQPHSGSQANFAVYTALLQPGDTVLGMNLAQGGHLTHGSP-----VNFSGKLYNIVPYGID-ES 153 (420)
T ss_dssp HHHHHHTCSE----EECCCSSHHHHHHHHHHHHCCTTCEEEEEEEC-----------------CHHHHSEEEEEEEC-TT
T ss_pred HHHHHhCCCC----ceeEecCcHHHHHHHHHHhcCCCCEEEecchhhcceeccchh-----hhhcccceeEEeccCC-cc
Confidence 9999999976 357788886688878899999999999999888876543332 1233444555665566 66
Q ss_pred CCCCHHHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCCcceEEEeCCCCC
Q 023191 180 GYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKS 259 (286)
Q Consensus 180 ~~~d~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~ 259 (286)
+.+|+++|+++++++++++|+++.+|+|...++++|.++|++||+++|+|++|+.|....+.....+..+|++++|+||+
T Consensus 154 ~~~d~~~l~~~i~~~~~~~v~~~~~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~di~~~s~sK~ 233 (420)
T 3gbx_A 154 GKIDYDEMAKLAKEHKPKMIIGGFSAYSGVVDWAKMREIADSIGAYLFVDMAHVAGLIAAGVYPNPVPHAHVVTTTTHKT 233 (420)
T ss_dssp CSCCHHHHHHHHHHHCCSEEEECCTTCCSCCCHHHHHHHHHHTTCEEEEECTTTHHHHHTTSSCCSTTTSSEEEEESSGG
T ss_pred CCcCHHHHHHHHHhcCCeEEEEecCccCCccCHHHHHHHHHHcCCEEEEECCcchhceecccCCcccccCCEEEeecccC
Confidence 88999999999987679999998777788889999999999999999999999888776555444445689999999999
Q ss_pred CCCCCceEEEEec---chhhhh
Q 023191 260 LRGPRGAMIFFRK---GVKEIN 278 (286)
Q Consensus 260 l~gp~gG~l~~~~---~~~~~~ 278 (286)
|+||+||++++++ ++.+..
T Consensus 234 ~~g~~gg~~~~~~~~~~~~~~~ 255 (420)
T 3gbx_A 234 LAGPRGGLILAKGGDEELYKKL 255 (420)
T ss_dssp GCSCSCEEEEESSCCHHHHHHH
T ss_pred CCCCCceEEEEcCCcHHHHHHh
Confidence 9999999999998 554433
No 7
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=99.97 E-value=2.1e-30 Score=236.16 Aligned_cols=250 Identities=42% Similarity=0.663 Sum_probs=181.0
Q ss_pred hhhccccccccChHHHHHHHHHHHHHHcCceecCCCCCCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHH
Q 023191 20 PKQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQK 99 (286)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~L~~~e~~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 99 (286)
+.++++.+..++++++..+.++..+..+.++|.++++++++.+++++.+.+.+.|..++++.++|.+....+.+++..++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 85 (425)
T 3ecd_A 6 NPFFSQSLAERDASVRGAILKELERQQSQVELIASENIVSRAVLDAQGSVLTNKYAEGYPGKRYYGGCEFADEVEALAIE 85 (425)
T ss_dssp SHHHHCCHHHHCHHHHHHHHHHHHHHHHSEECCTTCCCCCHHHHHHHTSGGGSSCTTC------------CCHHHHHHHH
T ss_pred chHHHHHHHhhCHHHHHHHHHHHHHHhcceeeecccCCCCHHHHHHHhhhhhcccccCCCcchhcCCChHHHHHHHHHHH
Confidence 34678889999999999998877777788999999999999999999999876676677776666665555566777778
Q ss_pred HHHHHCCCCCCCcceeEEeCCChHHHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCC
Q 023191 100 RALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNEST 179 (286)
Q Consensus 100 ~~~~~~g~~~~~~~~~v~~~sG~~a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~ 179 (286)
++++++|.+. ..|++++|+.++..++.+++++||+|+++++.|.++...+. .....|..++.++++.++++
T Consensus 86 ~~~~~~~~~~----~~v~~~~Gs~a~~~al~~~~~~gd~Vi~~~~~~~~~~~~~~-----~~~~~g~~~~~~~~~~~~~~ 156 (425)
T 3ecd_A 86 RVKRLFNAGH----ANVQPHSGAQANGAVMLALAKPGDTVLGMSLDAGGHLTHGA-----KPALSGKWFNALQYGVSRDT 156 (425)
T ss_dssp HHHHHHTCSE----EECCCSSHHHHHHHHHHHHCCTTCEEEEECC-----------------------CEEEEECCCTTT
T ss_pred HHHHHhCCCC----ceeecCchHHHHHHHHHHccCCCCEEEEcccccccceecch-----hhhhcccceeeeecCCCccc
Confidence 8999999876 23545666558887899999999999999988877432221 11234444555666666566
Q ss_pred CCCCHHHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCCcceEEEeCCCCC
Q 023191 180 GYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKS 259 (286)
Q Consensus 180 ~~~d~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~ 259 (286)
+.+|+++|++++++.++++|+++++++|...++++|.++|++||+++|+|++|+.|....+.....+..+|++++|+||+
T Consensus 157 ~~~d~~~l~~~i~~~~~~~v~~~~~~~~~~~~l~~i~~l~~~~~~~li~De~~~~g~~~~~~~~~~~~~~di~~~s~sK~ 236 (425)
T 3ecd_A 157 MLIDYDQVEALAQQHKPSLIIAGFSAYPRKLDFARFRAIADSVGAKLMVDMAHIAGVIAAGRHANPVEHAHVVTSTTHKT 236 (425)
T ss_dssp SSCCHHHHHHHHHHHCCSEEEEECSCCCSCCCHHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGGGTCSEEEEESSGG
T ss_pred CccCHHHHHHHHhhcCCcEEEEccccCCCcCCHHHHHHHHHHcCCEEEEECcChHhhhhcccccCchhcCcEEEecCCcc
Confidence 89999999999975589999998667798899999999999999999999999988776554444344589999999999
Q ss_pred CCCCCceEEEEec-chhhhh
Q 023191 260 LRGPRGAMIFFRK-GVKEIN 278 (286)
Q Consensus 260 l~gp~gG~l~~~~-~~~~~~ 278 (286)
|+||+||++++++ .+.+..
T Consensus 237 l~g~~~g~~~~~~~~~~~~~ 256 (425)
T 3ecd_A 237 LRGPRGGFVLTNDEEIAKKI 256 (425)
T ss_dssp GCCCSCEEEEESCHHHHHHH
T ss_pred cCCCCcEEEEeCCHHHHHHH
Confidence 9999999999985 454433
No 8
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=99.97 E-value=3.6e-29 Score=226.83 Aligned_cols=245 Identities=47% Similarity=0.798 Sum_probs=187.9
Q ss_pred cccccChHHHHHHHHHHHHHHcCceecCCCCCCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHC
Q 023191 26 PLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAF 105 (286)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~i~L~~~e~~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 105 (286)
++.++++.++..+..+..++.+.+.+..++++.++.+++++.+.+.+.+..+|++.+++.+.....++++.+++++++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~r~~la~~~ 82 (405)
T 2vi8_A 3 YLPQQDPQVFAAIEQERKRQHAKIELIASENFVSRAVMEAQGSVLTNKYAEGYPGRRYYGGCEYVDIVEELARERAKQLF 82 (405)
T ss_dssp SHHHHCHHHHHHHHHHHHHHHHSEECCTTCCCCCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHH
T ss_pred chhhhCHHHHHHHHHHHHHhhcceeeccCcccCCHHHHHHHHHHhhcccccCCCCccccccchHHHHHHHHHHHHHHHHh
Confidence 45678889999988877666666777778888899999999998865454456655555555667788888999999999
Q ss_pred CCCCCCcceeEEeCCChHHHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHH
Q 023191 106 RLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYD 185 (286)
Q Consensus 106 g~~~~~~~~~v~~~sG~~a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e 185 (286)
|++. ..|++++|+.++.+++.+++++||+|+++++.|+++..... .+...|...+.++++++++++.+|++
T Consensus 83 g~~~----~~i~~~sGt~a~~~a~~~~~~~gd~Vl~~~~~~~~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~~d~~ 153 (405)
T 2vi8_A 83 GAEH----ANVQPHSGAQANMAVYFTVLEHGDTVLGMNLSHGGHLTHGS-----PVNFSGVQYNFVAYGVDPETHVIDYD 153 (405)
T ss_dssp TCSE----EECCCSSHHHHHHHHHHHHCCTTCEEEEECGGGTCCTTTTC-----TTSHHHHHSEEEEECBCTTTCSBCHH
T ss_pred CCCc----eEEEecCcHHHHHHHHHHhcCCCCEEEEecccccchhcccc-----hhhhccceeEEEecccccccCCcCHH
Confidence 9875 24667888558888999999999999999987776643221 11233332344554554456789999
Q ss_pred HHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCCcceEEEeCCCCCCCCCCc
Q 023191 186 QLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG 265 (286)
Q Consensus 186 ~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~g 265 (286)
++++.+++.+|++|+++++|+|...++++|.++|++||+++|+|++|+.|....+.....+..+|++++|+||+|+||.|
T Consensus 154 ~l~~~i~~~~~~~v~~~~~~~~~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~~~di~~~s~sK~~~g~~g 233 (405)
T 2vi8_A 154 DVREKARLHRPKLIVAAAAAYPRIIDFAKFREIADEVGAYLMVDMAHIAGLVAAGLHPNPVPYAHFVTTTTHKTLRGPRG 233 (405)
T ss_dssp HHHHHHHHHCCSEEEECCSSCCSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCSTTTCSEEEEESSSTTCCCSC
T ss_pred HHHHHHHhcCCeEEEEeCCCCCccCCHHHHHHHHHHcCCEEEEEccccccccccCcCCCccccCCEEEEeccccCCCCCC
Confidence 99999986589999887788887778999999999999999999999977665554443333589999999999998888
Q ss_pred eEEEEecchhhhhc
Q 023191 266 AMIFFRKGVKEINK 279 (286)
Q Consensus 266 G~l~~~~~~~~~~~ 279 (286)
|++++++++.+..+
T Consensus 234 G~~~~~~~~~~~l~ 247 (405)
T 2vi8_A 234 GMILCQEQFAKQID 247 (405)
T ss_dssp EEEEECHHHHHHHH
T ss_pred eEEEEcHHHHHHHH
Confidence 99999977765544
No 9
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=99.96 E-value=9e-29 Score=224.35 Aligned_cols=242 Identities=48% Similarity=0.775 Sum_probs=186.4
Q ss_pred ccChHHHHHHHHHHHHHHcCceecCCCCCCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCC
Q 023191 29 VVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLD 108 (286)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~i~L~~~e~~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~ 108 (286)
..++.+++.+.++..+..+.++|..++++.++.+++++.+.+.+.+..+|++..++.+......+++.+++++++++|++
T Consensus 6 ~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~g~~~~~~~e~~ar~~la~~~g~~ 85 (407)
T 2dkj_A 6 KRDEALFELIALEEKRQREGLELIASENFVSKQVREAVGSVLTNKYAEGYPGARYYGGCEVIDRVESLAIERAKALFGAA 85 (407)
T ss_dssp CCCHHHHHHHHHHHHHHHTSEECCTTCCCCCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTCS
T ss_pred ccCHHHHHHHHHHHHHhhcceeeccCCCCCCHHHHHHHHhhhhcCcccCCCcccccCCchHHHHHHHHHHHHHHHHhCCC
Confidence 45688899998887777789999999999999999999998865343355554434344444466766778999999987
Q ss_pred CCCcceeEEeCCChHHHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHH
Q 023191 109 PEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLE 188 (286)
Q Consensus 109 ~~~~~~~v~~~sG~~a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~ 188 (286)
+ .+|++++|+.++.+++.+++++||+|+++++.|+++..+.. .+...|..++.++++++++++.+|+++++
T Consensus 86 ~----~~i~~~sGt~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~~d~~~l~ 156 (407)
T 2dkj_A 86 W----ANVQPHSGSQANMAVYMALMEPGDTLMGMDLAAGGHLTHGS-----RVNFSGKLYKVVSYGVRPDTELIDLEEVR 156 (407)
T ss_dssp E----EECCCSSHHHHHHHHHHHHCCTTCEEEEECGGGTCCGGGTC-----TTSHHHHHSEEEEECCCTTTSSCCHHHHH
T ss_pred c----ceEEecchHHHHHHHHHHhcCCCCEEEEecccccCccchHH-----HHHhcCceEEEEecCCCcccCccCHHHHH
Confidence 5 34778888888887889999999999999987776642222 23344544455665555446889999999
Q ss_pred HHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCCcceEEEeCCCCCCCCCCceEE
Q 023191 189 KSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMI 268 (286)
Q Consensus 189 ~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~gG~l 268 (286)
+.+++.++++|+++.+++|...++++|.++|++||+++|+|++|+.|....+.....+..+|++++|+||+++|+++|++
T Consensus 157 ~~l~~~~~~~v~~~~p~~~~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~~~di~~~s~sK~l~g~~~G~~ 236 (407)
T 2dkj_A 157 RLALEHRPKVIVAGASAYPRFWDFKAFREIADEVGAYLVVDMAHFAGLVAAGLHPNPLPYAHVVTSTTHKTLRGPRGGLI 236 (407)
T ss_dssp HHHHHHCCSEEEECCSSCCSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTCSCCCTTTCSEEEEESSGGGCCCSCEEE
T ss_pred HHHhhcCCeEEEEeccccCCCCCHHHHHHHHHHcCCEEEEEccccccccccCccCCccccccEEEEeccccCCCCCceEE
Confidence 99985589999997666688889999999999999999999999987765554333333589999999999999999999
Q ss_pred EEe-cchhhhhc
Q 023191 269 FFR-KGVKEINK 279 (286)
Q Consensus 269 ~~~-~~~~~~~~ 279 (286)
+++ +++.+..+
T Consensus 237 ~~~~~~~~~~l~ 248 (407)
T 2dkj_A 237 LSNDPELGKRID 248 (407)
T ss_dssp EESCHHHHHHHH
T ss_pred EECCHHHHHHHH
Confidence 999 57665443
No 10
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=99.92 E-value=3.6e-24 Score=192.10 Aligned_cols=203 Identities=14% Similarity=0.073 Sum_probs=155.1
Q ss_pred ceecCCCCCCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-HHHH
Q 023191 49 LELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQ 127 (286)
Q Consensus 49 i~L~~~e~~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~ 127 (286)
+.+.++..++++.+++++.+.+...+ .....++.+.+++++++++|++.+. .+|++++|++ ++.
T Consensus 4 ~~~~~gp~~~~~~v~~a~~~~~~~~~------------~~~~~~~~~~~~~~la~~~~~~~~~--~~v~~~~g~t~al~- 68 (384)
T 3zrp_A 4 LLLHVGPTTIKEDVLVAGLENNVGFT------------SKEFVEALAYSLKGLRYVMGASKNY--QPLIIPGGGTSAME- 68 (384)
T ss_dssp --CCSSCSCCCHHHHHHTTCCSCCTT------------SHHHHHHHHHHHHHHHHHHTCCTTS--EEEEEESCHHHHHH-
T ss_pred eeccCCCCCCCHHHHHHhhccccccc------------cHHHHHHHHHHHHHHHHHhCCCCCC--cEEEEcCCcHHHHH-
Confidence 45677777899999999988764311 1233566667889999999997632 2599999999 888
Q ss_pred HHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-
Q 023191 128 VYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA- 205 (286)
Q Consensus 128 ~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~-~~n- 205 (286)
++.+++++||+|+++++.|.+. + +...+...|.+++.++ .+ .++.+|++++++.++++++++|+++ ++|
T Consensus 69 ~~~~~~~~gd~vi~~~~~~~~~--~----~~~~~~~~g~~~~~v~--~~-~~~~~d~~~l~~~i~~~~~~~v~~~~~~np 139 (384)
T 3zrp_A 69 SVTSLLKPNDKILVVSNGVFGD--R----WEQIFKRYPVNVKVLR--PS-PGDYVKPGEVEEEVRKSEYKLVALTHVETS 139 (384)
T ss_dssp HGGGGCCTTCEEEEECSSHHHH--H----HHHHHTTSSCEEEEEC--CS-TTCCCCHHHHHHHHHHSCEEEEEEESEETT
T ss_pred HHHhhcCCCCEEEEecCCcchH--H----HHHHHHHcCCcEEEec--CC-CCCCCCHHHHHHHHHhCCCcEEEEeCCCCC
Confidence 8899999999999998655442 1 1112234565565555 44 4578999999999987679999997 555
Q ss_pred CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCCcceEEEeCCCCCCCCCCc-eEEEEecchhhhh
Q 023191 206 YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEIN 278 (286)
Q Consensus 206 ~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~g-G~l~~~~~~~~~~ 278 (286)
+|...|+++|.++|++||+++|+|++|+.+....+..... +|++++|+||+|+|+.| |++++++++.+..
T Consensus 140 tG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~---~d~~~~s~~K~~~~~~g~g~~~~~~~~~~~~ 210 (384)
T 3zrp_A 140 TGVREPVKDVINKIRKYVELIVVDGVSSVGAEEVKAEEWN---VDVYLTASQKALGSAAGLGLLLLSPKALSIL 210 (384)
T ss_dssp TTEECCHHHHHHHHGGGEEEEEEECTTTTTTSCCCTTTTT---CSEEEEETTSTTCCCSSEEEEEECHHHHHHH
T ss_pred CceECcHHHHHHHHHhcCCEEEEECcccccCccccccccC---CCEEEecCcccccCCCceEEEEECHHHHHHh
Confidence 7788899999999999999999999998877654444333 89999999999988888 9999998875544
No 11
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=99.92 E-value=5.8e-24 Score=192.76 Aligned_cols=206 Identities=17% Similarity=0.200 Sum_probs=157.5
Q ss_pred CceecCCCCCCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-HHH
Q 023191 48 GLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNF 126 (286)
Q Consensus 48 ~i~L~~~e~~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~ 126 (286)
.+.+.++...+++.+++++.+.+...+ ......+.+.+++++++++|.+.+. .|++++|++ ++.
T Consensus 14 ~~~~~pgp~~~~~~v~~a~~~~~~~~~------------~~~~~~~~~~~~~~la~~~~~~~~~---~v~~~~sgt~al~ 78 (411)
T 3nnk_A 14 RLLMGPGPINADPRVLRAMSSQLIGQY------------DPAMTHYMNEVMALYRGVFRTENRW---TMLVDGTSRAGIE 78 (411)
T ss_dssp CEEESSSCCCCCHHHHHHHTSCCCCTT------------CHHHHHHHHHHHHHHHHHHTCCCSE---EEEEESCHHHHHH
T ss_pred ceeecCCCCCCCHHHHHHhhccccccc------------cHHHHHHHHHHHHHHHHHhCCCCCc---EEEECCCcHHHHH
Confidence 356677777889999999987543211 1223456677889999999997642 377777766 888
Q ss_pred HHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC
Q 023191 127 QVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA 205 (286)
Q Consensus 127 ~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~-~~n 205 (286)
+++.+++++||+|+++++.|.+.. +...+...|.+++.++ .+ +++.+|+++|+++++++++++|+++ ++|
T Consensus 79 ~~~~~~~~~gd~Vl~~~~~~~~~~------~~~~~~~~g~~~~~v~--~~-~~~~~d~~~l~~~i~~~~~~~v~~~~~~n 149 (411)
T 3nnk_A 79 AILVSAIRPGDKVLVPVFGRFGHL------LCEIARRCRAEVHTIE--VP-WGEVFTPDQVEDAVKRIRPRLLLTVQGDT 149 (411)
T ss_dssp HHHHHHCCTTCEEEEEECSHHHHH------HHHHHHHTTCEEEEEE--CC-TTCCCCHHHHHHHHHHHCCSEEEEESEET
T ss_pred HHHHHhcCCCCEEEEecCCchHHH------HHHHHHHcCCeEEEEe--cC-CCCCCCHHHHHHHHhhCCCeEEEEeCCCC
Confidence 799999999999999996554421 2223445566666665 44 5678999999999986689999998 555
Q ss_pred -CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCCcceEEEeCCCCCCCCCCc-eEEEEecchhhhhcc
Q 023191 206 -YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEINKQ 280 (286)
Q Consensus 206 -~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~g-G~l~~~~~~~~~~~~ 280 (286)
+|...|+++|.++|++||+++|+|++|+.+....+..... +|++++|+||+|+||.| |++++++++.+..++
T Consensus 150 ptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~---~d~~~~s~~K~l~~~~g~g~~~~~~~~~~~~~~ 223 (411)
T 3nnk_A 150 STTMLQPLAELGEICRRYDALFYTDATASLGGNPLETDVWG---LDAVSAGMQKCLGGPSGTSPITLSARMEEAIRR 223 (411)
T ss_dssp TTTEECCCTTHHHHHHHHTCEEEEECTTTBTTBCCCTTTTT---CSEEECCSTTTTCCCSSEEEEEECHHHHHHHHT
T ss_pred CcceeccHHHHHHHHHHcCCEEEEECCcccCCcccchhccC---CcEEEecCccccCCCCceEEEEECHHHHHHHhh
Confidence 7788899999999999999999999998877655544433 89999999999888888 999999987766554
No 12
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=99.92 E-value=5.9e-24 Score=191.82 Aligned_cols=204 Identities=13% Similarity=0.066 Sum_probs=156.2
Q ss_pred ceecCCCCCCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-HHHH
Q 023191 49 LELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQ 127 (286)
Q Consensus 49 i~L~~~e~~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~ 127 (286)
+.+.++..++++.+++++.+.+.+.| + ....++++++++++++++|++++. +|++|+|++ ++..
T Consensus 36 ~l~~~~~~~~~~~v~~a~~~~~~~~~----------~--~~~~~~~~~~~~~la~~~g~~~~~---~v~~t~g~t~al~~ 100 (393)
T 1vjo_A 36 LLLGPGPSNAHPSVLQAMNVSPVGHL----------D--PAFLALMDEIQSLLRYVWQTENPL---TIAVSGTGTAAMEA 100 (393)
T ss_dssp EECSSSCCCCCHHHHHHHSSCCCCTT----------S--HHHHHHHHHHHHHHHHHHTCCCSC---EEEESSCHHHHHHH
T ss_pred eeccCCCCCCCHHHHHHHhccccccc----------C--HHHHHHHHHHHHHHHHHhCCCCCc---EEEEeCchHHHHHH
Confidence 44455556789999999988765422 1 224577888999999999997641 599999999 8888
Q ss_pred HHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-
Q 023191 128 VYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA- 205 (286)
Q Consensus 128 ~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~-~~n- 205 (286)
++.+++++||+|+++++.|.+. . +...+...|.+++.++ .+ +++.+|+++|++.+++.++++|+++ ++|
T Consensus 101 ~~~~~~~~gd~Vl~~~~~~~~~--~----~~~~~~~~g~~~~~v~--~~-~~~~~d~~~l~~~l~~~~~~~v~~~~~~np 171 (393)
T 1vjo_A 101 TIANAVEPGDVVLIGVAGYFGN--R----LVDMAGRYGADVRTIS--KP-WGEVFSLEELRTALETHRPAILALVHAETS 171 (393)
T ss_dssp HHHHHCCTTCEEEEEESSHHHH--H----HHHHHHHTTCEEEEEE--CC-TTCCCCHHHHHHHHHHHCCSEEEEESEETT
T ss_pred HHHhccCCCCEEEEEcCChhHH--H----HHHHHHHcCCceEEEe--cC-CCCCCCHHHHHHHHhhCCceEEEEeccCCC
Confidence 9999999999999999665541 0 2223445666665565 44 4578999999999976578999987 555
Q ss_pred CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCCcceEEEeCCCCCCCCCCc-eEEEEecchhhhhc
Q 023191 206 YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEINK 279 (286)
Q Consensus 206 ~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~g-G~l~~~~~~~~~~~ 279 (286)
+|...|+++|.++|+++|+++|+|++|+.|..+.++... ++|++++|+||+|++|.+ |++++++++.+..+
T Consensus 172 tG~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~---~~di~~~s~sK~l~~~~~~G~l~~~~~~~~~~~ 243 (393)
T 1vjo_A 172 TGARQPLEGVGELCREFGTLLLVDTVTSLGGVPIFLDAW---GVDLAYSCSQKGLGCSPGASPFTMSSRAIEKLQ 243 (393)
T ss_dssp TTEECCCTTHHHHHHHHTCEEEEECTTTTTTSCCCTTTT---TCSEEECCSSSTTCSCSSCEEEEECHHHHHHHH
T ss_pred cceeccHHHHHHHHHHcCCEEEEECCccccCcCCccccc---CccEEEEcCcccccCCCceEEEEECHHHHHHHh
Confidence 777889999999999999999999999977554333222 489999999999988888 99999988766553
No 13
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=99.92 E-value=7.1e-24 Score=191.20 Aligned_cols=206 Identities=13% Similarity=0.123 Sum_probs=156.7
Q ss_pred cCceecCCCCCCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-HH
Q 023191 47 KGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SN 125 (286)
Q Consensus 47 ~~i~L~~~e~~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~ 125 (286)
..+++.++..++++.+++++.+.+...+ ........+++++++++++|++++. +|++|+|++ ++
T Consensus 19 ~~~~~~~g~~~~~~~v~~a~~~~~~~~~------------~~~~~~~~~~l~~~la~~~g~~~~~---~i~~~~g~t~a~ 83 (393)
T 2huf_A 19 NKLLMGPGPSNAPQRVLDAMSRPILGHL------------HPETLKIMDDIKEGVRYLFQTNNIA---TFCLSASGHGGM 83 (393)
T ss_dssp CCEECSSSCCCCCHHHHHHTTSCCCCTT------------SHHHHHHHHHHHHHHHHHHTCCCSE---EEEESSCHHHHH
T ss_pred CeEEecCCCCCCCHHHHHHHHhhhccCC------------CHHHHHHHHHHHHHHHHHhCCCCCc---EEEEcCcHHHHH
Confidence 3467777777789999999988765421 1223455666779999999987642 599999998 88
Q ss_pred HHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CC
Q 023191 126 FQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-AS 204 (286)
Q Consensus 126 ~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~-~~ 204 (286)
.+++.+++++||+|+++++.|.++. . ...+...|..++.++ .+ +++.+|++++++.+++.++++|+++ ++
T Consensus 84 ~~~~~~~~~~gd~vl~~~~~~~~~~--~----~~~~~~~g~~~~~v~--~~-~~~~~d~~~l~~~i~~~~~~~v~~~~~~ 154 (393)
T 2huf_A 84 EATLCNLLEDGDVILIGHTGHWGDR--S----ADMATRYGADVRVVK--SK-VGQSLSLDEIRDALLIHKPSVLFLTQGD 154 (393)
T ss_dssp HHHHHHHCCTTCEEEEEESSHHHHH--H----HHHHHHTTCEEEEEE--CC-TTCCCCHHHHHHHHHHHCCSEEEEESEE
T ss_pred HHHHHHHhCCCCEEEEECCCcchHH--H----HHHHHHcCCeeEEEe--CC-CCCCCCHHHHHHHHhccCCcEEEEEccC
Confidence 8899999999999999997665531 1 011223465565565 44 4568999999999976579999997 55
Q ss_pred C-CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCCcceEEEeCCCCCCCCCCc-eEEEEecchhhhhc
Q 023191 205 A-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEINK 279 (286)
Q Consensus 205 n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~g-G~l~~~~~~~~~~~ 279 (286)
| +|...|+++|.++|++||+++|+|++|+.|....++... ++|++++|+||+|+||.| |++++++++.+..+
T Consensus 155 nptG~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~---~~d~~~~s~sK~l~g~~G~G~~~~~~~~~~~~~ 228 (393)
T 2huf_A 155 SSTGVLQGLEGVGALCHQHNCLLIVDTVASLGGAPMFMDRW---EIDAMYTGSQKVLGAPPGITPVSFSHRAVERYK 228 (393)
T ss_dssp TTTTEECCCTTHHHHHHHTTCEEEEECTTTBTTBCCCTTTT---TCSEEECCSSSTTCCCSSCEEEEECHHHHHHHH
T ss_pred CCccccCCHHHHHHHHHHcCCEEEEEcccccCCCCcchhhc---CccEEEECCCcccccCCCeEEEEECHHHHHHHh
Confidence 5 778889999999999999999999999887655443322 389999999999998888 99999987766554
No 14
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=99.91 E-value=1.6e-23 Score=190.09 Aligned_cols=205 Identities=15% Similarity=0.156 Sum_probs=155.2
Q ss_pred CceecCCCCCCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-HHH
Q 023191 48 GLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNF 126 (286)
Q Consensus 48 ~i~L~~~e~~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~ 126 (286)
.+.|.++...+++.+++++.+.....+ .....++.+++++++++++|++.+. .+++++|++ ++.
T Consensus 12 ~~~~~p~p~~~~~~v~~a~~~~~~~~~------------~~~~~~~~~~l~~~la~~~g~~~~~---~~~~~~s~t~al~ 76 (416)
T 3isl_A 12 RTIMTPGPVEVDPRVLRVMSTPVVGQF------------DPAFTGIMNETMEMLRELFQTKNRW---AYPIDGTSRAGIE 76 (416)
T ss_dssp CEECSSSSCCCCHHHHHHTTSCCCCTT------------SHHHHHHHHHHHHHHHHHTTCCCSE---EEEEESCHHHHHH
T ss_pred ceeecCCCcCcCHHHHHHhcccCCCCc------------cHHHHHHHHHHHHHHHHHhCCCCCc---EEEecCcHHHHHH
Confidence 456777777789999998876432211 1233566777889999999987642 243666665 887
Q ss_pred HHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC
Q 023191 127 QVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA 205 (286)
Q Consensus 127 ~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~-~~n 205 (286)
+++.++++|||+|+++++.|.++. +...+...|.+++.++ .+ .++.+|++++++++++.++++|+++ ++|
T Consensus 77 ~~~~~l~~~gd~Vl~~~~~~~~~~------~~~~~~~~g~~~~~v~--~~-~~~~~d~~~l~~~i~~~~~~~v~~~~~~n 147 (416)
T 3isl_A 77 AVLASVIEPEDDVLIPIYGRFGYL------LTEIAERYGANVHMLE--CE-WGTVFDPEDIIREIKKVKPKIVAMVHGET 147 (416)
T ss_dssp HHHHHHCCTTCEEEEEESSHHHHH------HHHHHHHTTCEEEEEE--CC-TTCCCCHHHHHHHHHHHCCSEEEEESEET
T ss_pred HHHHHhcCCCCEEEEecCCcccHH------HHHHHHhcCCeeEEEe--cC-CCCCCCHHHHHHHHhhCCCcEEEEEccCC
Confidence 788999999999999996655421 1223345566666665 44 4578999999999984489999997 566
Q ss_pred -CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCCcceEEEeCCCCCCCCCCc-eEEEEecchhhhhc
Q 023191 206 -YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEINK 279 (286)
Q Consensus 206 -~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~g-G~l~~~~~~~~~~~ 279 (286)
+|...|+++|.++|++||+++|+|++|+.|....+..... +|++++|+||+++||.| |++++++++.+..+
T Consensus 148 ptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~---~d~~~~s~~K~l~g~~g~g~~~~~~~~~~~~~ 220 (416)
T 3isl_A 148 STGRIHPLKAIGEACRTEDALFIVDAVATIGGCEVKVDEWK---IDAAIGGTQKCLSVPSGMAPITYNERVADVIA 220 (416)
T ss_dssp TTTEECCCHHHHHHHHHTTCEEEEECTTTTTTSCCCTTTTT---CSEEECCSSSTTCCCSSEEEEEECHHHHHHHH
T ss_pred CCceecCHHHHHHHHHHcCCEEEEECCccccCCCcchhhcC---CCEEEecCccccCCCCCeEEEEECHHHHHHhh
Confidence 7788899999999999999999999999887665544433 89999999999888888 99999988765554
No 15
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=99.91 E-value=1.7e-23 Score=187.98 Aligned_cols=200 Identities=11% Similarity=0.041 Sum_probs=152.6
Q ss_pred cCCCCCCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-HHHHHHH
Q 023191 52 IPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYT 130 (286)
Q Consensus 52 ~~~e~~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l~ 130 (286)
.++...+++.+++++.+.+.+.| + ....++++++++++++++|++ +. .++++++|++ ++..++.
T Consensus 25 ~~~~~~~~~~v~~a~~~~~~~~~----------~--~~~~~~~~~~~~~la~~~g~~-~~--~~v~~~~g~t~a~~~~~~ 89 (386)
T 2dr1_A 25 TAGPVACFPEVLEIMKVQMFSHR----------S--KEYRKVHMDTVERLREFLEVE-KG--EVLLVPSSGTGIMEASIR 89 (386)
T ss_dssp CSSSCCCCHHHHHHTTSCCCCTT----------S--HHHHHHHHHHHHHHHHHHTCS-SS--EEEEESSCHHHHHHHHHH
T ss_pred cCCCcCCcHHHHHHHhccccccc----------C--HHHHHHHHHHHHHHHHHhCCC-CC--cEEEEeCChHHHHHHHHH
Confidence 44555679999999988764322 1 123678888999999999997 11 3599999999 8888999
Q ss_pred HhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhh-cCCcEEEEc-CCC-CC
Q 023191 131 ALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATL-FRPKLIVAG-ASA-YA 207 (286)
Q Consensus 131 a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~-~~tk~v~i~-~~n-~g 207 (286)
+++++||+|+++++.|.+.. +...+...|.+++.++ .+ .++.+|+++|++.+.+ .++++|+++ ++| +|
T Consensus 90 ~l~~~gd~vl~~~~~~~~~~------~~~~~~~~g~~~~~v~--~~-~~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG 160 (386)
T 2dr1_A 90 NGVSKGGKVLVTIIGAFGKR------YKEVVESNGRKAVVLE--YE-PGKAVKPEDLDDALRKNPDVEAVTITYNETSTG 160 (386)
T ss_dssp HHSCTTCEEEEEESSHHHHH------HHHHHHHTTCEEEEEE--CC-TTCCCCHHHHHHHHHHCTTCCEEEEESEETTTT
T ss_pred HhhcCCCeEEEEcCCchhHH------HHHHHHHhCCceEEEe--cC-CCCCCCHHHHHHHHhcCCCCcEEEEEeecCCcc
Confidence 99999999999996665520 2223345566565555 44 4578999999999953 379999997 555 77
Q ss_pred CccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCCcceEEEeCCCCCCCCCCc-eEEEEecchhhhh
Q 023191 208 RLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEIN 278 (286)
Q Consensus 208 ~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~g-G~l~~~~~~~~~~ 278 (286)
...|+++|.++|++||+++|+|++|+.|....+.... ++|++++|+||+|++|.| |++++++++.+..
T Consensus 161 ~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~---~~di~~~s~sK~~~~~~g~G~~~~~~~~~~~~ 229 (386)
T 2dr1_A 161 VLNPLPELAKVAKEHDKLVFVDAVSAMGGADIKFDKW---GLDVVFSSSQKAFGVPPGLAIGAFSERFLEIA 229 (386)
T ss_dssp EECCHHHHHHHHHHTTCEEEEECTTTBTTBCCCTTTT---TCSEEEEETTSTTCCCSSCEEEEECHHHHHHH
T ss_pred hhCCHHHHHHHHHHcCCeEEEEccccccCcccccccc---CCcEEEEeccccccCCCceEEEEECHHHHHHH
Confidence 8889999999999999999999999987654333222 489999999999999877 9999998876544
No 16
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=99.91 E-value=2e-23 Score=187.88 Aligned_cols=206 Identities=14% Similarity=0.131 Sum_probs=155.0
Q ss_pred CceecCCCCCCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-HHH
Q 023191 48 GLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNF 126 (286)
Q Consensus 48 ~i~L~~~e~~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~ 126 (286)
.+.+.++...+++.+++++.+.+...+ .....++..++++++++++|.+.+. +|++++|++ ++.
T Consensus 24 ~~~~~p~p~~~~~~v~~a~~~~~~~~~------------~~~~~~~~~~l~~~la~~~~~~~~~---~v~~~~gg~~al~ 88 (393)
T 3kgw_A 24 RLLLGPGPSNLAPRVLAAGSLRMIGHM------------QKEMLQIMEEIKQGIQYVFQTRNPL---TLVVSGSGHCAME 88 (393)
T ss_dssp CEECSSSCCCCCHHHHHHTTCCCCCTT------------SHHHHHHHHHHHHHHHHHHTCCCSE---EEEESCCTTTHHH
T ss_pred ceeccCCCCCCCHHHHHHhcccccCcc------------cHHHHHHHHHHHHHHHHHhCCCCCc---EEEEeCCcHHHHH
Confidence 456777777889999999987543211 1223456667789999999986532 488888888 888
Q ss_pred HHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC
Q 023191 127 QVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA 205 (286)
Q Consensus 127 ~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~-~~n 205 (286)
.++.+++++||+|+++.+.|.+. .+...+...|..++.++ .+ .++.+|+++|++.++++++++|+++ ++|
T Consensus 89 ~~~~~~~~~gd~vl~~~~~~~~~------~~~~~~~~~g~~~~~~~--~~-~~~~~d~~~l~~~i~~~~~~~v~~~~~~n 159 (393)
T 3kgw_A 89 TALFNLLEPGDSFLTGTNGIWGM------RAAEIADRIGARVHQMI--KK-PGEHYTLQEVEEGLAQHKPVLLFLVHGES 159 (393)
T ss_dssp HHHHHHCCTTCEEEEEESSHHHH------HHHHHHHHTTCEEEEEE--CC-TTCCCCHHHHHHHHHHHCCSEEEEESEET
T ss_pred HHHHhcCCCCCEEEEEeCCchhH------HHHHHHHHcCCceEEEe--CC-CCCCCCHHHHHHHHhhCCCcEEEEeccCC
Confidence 89999999999999987443211 01112345566666565 44 4568999999999987689999998 555
Q ss_pred -CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCCcceEEEeCCCCCCCCCCc-eEEEEecchhhhhcc
Q 023191 206 -YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEINKQ 280 (286)
Q Consensus 206 -~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~g-G~l~~~~~~~~~~~~ 280 (286)
+|...|+++|.++|++||+++|+|++|+.|....+..... +|++++|+||+|+|+.| |++++++++.+..++
T Consensus 160 ptG~~~~l~~i~~l~~~~~~~li~De~~~~g~~~~~~~~~~---~d~~~~s~sK~~~~~~g~g~~~~~~~~~~~~~~ 233 (393)
T 3kgw_A 160 STGVVQPLDGFGELCHRYQCLLLVDSVASLGGVPIYMDQQG---IDIMYSSSQKVLNAPPGISLISFNDKAKYKVYS 233 (393)
T ss_dssp TTTEECCCTTHHHHHHHTTCEEEEECTTTTTTSCCCTTTTT---CCEEEEESSSTTCCCSSCEEEEECHHHHHHHHT
T ss_pred cchhhccHHHHHHHHHHcCCEEEEECCccccCcccchhhcC---CCEEEecCcccccCCCceeEEEECHHHHHHHhc
Confidence 6788899999999999999999999998776554443333 89999999999988888 999999887766543
No 17
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=99.91 E-value=9.3e-24 Score=190.56 Aligned_cols=236 Identities=14% Similarity=0.088 Sum_probs=164.3
Q ss_pred ccccccccChHHHHHHHHHHHHH----HcCceecCCCCC--CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHH
Q 023191 23 LNAPLEVVDPEIADIIEHEKARQ----WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESL 96 (286)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~----~~~i~L~~~e~~--~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~ 96 (286)
+++++..++++.+..+.....+. .+.++|..+++. +++.+.+++.+.+.... .+ |+...+..+++++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~-~~------y~~~~g~~~lr~~ 76 (385)
T 1b5p_A 4 LSRRVQAMKPSATVAVNAKALELRRQGVDLVALTAGEPDFDTPEHVKEAARRALAQGK-TK------YAPPAGIPELREA 76 (385)
T ss_dssp CCHHHHHCCCCHHHHHHHHHHHHHHTTCCCEECCCSSCSSCCCHHHHHHHHHHHHTTC-CS------CCCTTCCHHHHHH
T ss_pred hhhHHhhcCcchHHHHHHHHHHHHhcCCCEEEecCCCCCCCCCHHHHHHHHHHHhcCC-CC------CCCCCCCHHHHHH
Confidence 33444445554444444432221 357899888873 57889999888775422 12 3333566789999
Q ss_pred HHHHHHHHCCCCCCCcceeEEeCCChH-HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEeccc
Q 023191 97 CQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRL 175 (286)
Q Consensus 97 ~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~ 175 (286)
+.+++.+.+|++.+. .+|++|+|++ ++.+++.++++|||+|+++++.|.++ ...+...|.+++.++ .
T Consensus 77 ia~~~~~~~g~~~~~--~~i~~t~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~--------~~~~~~~g~~~~~v~--~ 144 (385)
T 1b5p_A 77 LAEKFRRENGLSVTP--EETIVTVGGSQALFNLFQAILDPGDEVIVLSPYWVSY--------PEMVRFAGGVVVEVE--T 144 (385)
T ss_dssp HHHHHHHTTCCCCCG--GGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHH--------HHHHHHTTCEEEEEE--C
T ss_pred HHHHHHHHhCCCCCh--HHEEEcCChHHHHHHHHHHhcCCCCEEEEcCCCchhH--------HHHHHHcCCEEEEee--c
Confidence 999999888864322 3599999999 88889999999999999999665544 334456676666665 4
Q ss_pred CC-CCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccC---HHHHHHHHHhcCCEEEEeccccccccccCCCCC--CCC
Q 023191 176 NE-STGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVIPS--PFE 247 (286)
Q Consensus 176 ~~-~~~~~d~e~l~~~i~~~~tk~v~i~-~~n-~g~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~--~~~ 247 (286)
+. +++.+|++++++++++ ++++|+++ |+| +|...+ +++|+++|++||+++|+|++|+..... +.... .+.
T Consensus 145 ~~~~~~~~d~~~l~~~l~~-~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~-~~~~~~~~~~ 222 (385)
T 1b5p_A 145 LPEEGFVPDPERVRRAITP-RTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYE-GEHFSPGRVA 222 (385)
T ss_dssp CGGGTTCCCHHHHHTTCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSS-SCCCCGGGTC
T ss_pred CcccCCCCCHHHHHHhcCC-CCEEEEEeCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEccchhcccC-CCCCCHHHcC
Confidence 32 3578999999999987 88999886 767 776655 889999999999999999997654332 11110 011
Q ss_pred -cceEEEeCCCCCCCC--CCceEEEEecchhhhhc
Q 023191 248 -YADVVTTTTHKSLRG--PRGAMIFFRKGVKEINK 279 (286)
Q Consensus 248 -~~D~v~~s~~K~l~g--p~gG~l~~~~~~~~~~~ 279 (286)
..++++.|++|+++. .+.|++++++++.+..+
T Consensus 223 ~~~~i~~~s~SK~~~~~G~RiG~~~~~~~~~~~l~ 257 (385)
T 1b5p_A 223 PEHTLTVNGAAKAFAMTGWRIGYACGPKEVIKAMA 257 (385)
T ss_dssp TTTEEEEEESTTTTTCGGGCCEEEECCHHHHHHHH
T ss_pred CCCEEEEEechhhcCCcccceEEEEeCHHHHHHHH
Confidence 357889999998853 34599999887765544
No 18
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=99.91 E-value=2.8e-23 Score=187.49 Aligned_cols=205 Identities=13% Similarity=0.124 Sum_probs=152.9
Q ss_pred CceecCCCCCCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-HHH
Q 023191 48 GLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNF 126 (286)
Q Consensus 48 ~i~L~~~e~~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~ 126 (286)
.++++++...+++.+++++.+.+...| ..........+++.+++++|.+++. +|++++|++ ++.
T Consensus 19 ~~~~~~~p~~~~~~v~~a~~~~~~~~~------------~~~~~~~~~~l~~~la~~~~~~~~~---~v~~~~g~t~al~ 83 (396)
T 2ch1_A 19 KIMMGPGPSNCSKRVLTAMTNTVLSNF------------HAELFRTMDEVKDGLRYIFQTENRA---TMCVSGSAHAGME 83 (396)
T ss_dssp CBCCSSSSCCCCHHHHHHTTSCCCCTT------------CHHHHHHHHHHHHHHHHHHTCCCSC---EEEESSCHHHHHH
T ss_pred ceeecCCCCCCCHHHHHHhccccccCC------------ChhHHHHHHHHHHHHHHHhCCCCCc---EEEECCcHHHHHH
Confidence 456666666689999999987654311 1122344556778899999987742 599999998 888
Q ss_pred HHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC
Q 023191 127 QVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA 205 (286)
Q Consensus 127 ~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~-~~n 205 (286)
+++.+++++||+|+++++.|.++. . ...+...|..++.++ .+ +++.+|++++++.+++.++++|+++ ++|
T Consensus 84 ~~~~~~~~~gd~vl~~~~~~~~~~--~----~~~~~~~g~~~~~v~--~~-~~~~~d~~~l~~~l~~~~~~~v~~~~~~n 154 (396)
T 2ch1_A 84 AMLSNLLEEGDRVLIAVNGIWAER--A----VEMSERYGADVRTIE--GP-PDRPFSLETLARAIELHQPKCLFLTHGDS 154 (396)
T ss_dssp HHHHHHCCTTCEEEEEESSHHHHH--H----HHHHHHTTCEEEEEE--CC-TTSCCCHHHHHHHHHHHCCSEEEEESEET
T ss_pred HHHHHhcCCCCeEEEEcCCcccHH--H----HHHHHHcCCceEEec--CC-CCCCCCHHHHHHHHHhCCCCEEEEECCCC
Confidence 899999999999999996665541 0 012345566666665 44 4678999999999976579999997 555
Q ss_pred -CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCCcceEEEeCCCCCCCCCCc-eEEEEecchhhhhc
Q 023191 206 -YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEINK 279 (286)
Q Consensus 206 -~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~g-G~l~~~~~~~~~~~ 279 (286)
+|...|+++|.++|+++|+++|+|++|+.|....++... ++|++++|+||++++|.| |++++++++.+..+
T Consensus 155 ptG~~~~~~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~---~~d~~~~s~~K~~~~~~g~g~~~~~~~~~~~~~ 227 (396)
T 2ch1_A 155 SSGLLQPLEGVGQICHQHDCLLIVDAVASLCGVPFYMDKW---EIDAVYTGAQKVLGAPPGITPISISPKALDVIR 227 (396)
T ss_dssp TTTEECCCTTHHHHHHHTTCEEEEECTTTBTTBCCCTTTT---TCCEEECCCC-CCCCCSSCEEEEECHHHHHHHH
T ss_pred CCceecCHHHHHHHHHHcCCEEEEEccccccCCccchhhc---CcCEEEEcCCccccCCCCeEEEEECHHHHHhhh
Confidence 778889999999999999999999999877554333222 379999999999998888 99999887665543
No 19
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=99.91 E-value=1.3e-23 Score=188.48 Aligned_cols=207 Identities=17% Similarity=0.099 Sum_probs=154.1
Q ss_pred cCceecCCCCCCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-HH
Q 023191 47 KGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SN 125 (286)
Q Consensus 47 ~~i~L~~~e~~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~ 125 (286)
...+|+++..++|+++++++.+.+...+ .....++.+++++++++++|++.+. ..+++++|++ ++
T Consensus 19 ~~~~~~pgp~~~~~~v~~a~~~~~~~~~------------~~~~~~~~~~~~~~la~~~g~~~~~--~~i~~~~ggt~al 84 (376)
T 3f0h_A 19 GMLNFTVGPVMSSEEVRAIGAEQVPYFR------------TTEFSSTMLENEKFMLEYAKAPEGS--KAVFMTCSSTGSM 84 (376)
T ss_dssp SCEECSSSSCCCCHHHHHHHTSCCCCCS------------SHHHHHHHHHHHHHHHHHHTCCTTC--EEEEESSCHHHHH
T ss_pred CceeecCCCCCCcHHHHHHhcCCCCCCC------------CHHHHHHHHHHHHHHHHHhCCCCCc--eEEEEcCChhHHH
Confidence 4678888888899999999987653311 1234466777889999999997542 1355588877 88
Q ss_pred HHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CC
Q 023191 126 FQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-AS 204 (286)
Q Consensus 126 ~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~-~~ 204 (286)
.+++.++++|||+|+++++.+.++.. ...+...|..+..++ .+ .++.+|++++++.+++ ++++|+++ ++
T Consensus 85 ~~~~~~~~~~gd~vi~~~~~~~~~~~------~~~~~~~g~~~~~v~--~~-~~~~~d~~~l~~~~~~-~~~~v~~~~~~ 154 (376)
T 3f0h_A 85 EAVVMNCFTKKDKVLVIDGGSFGHRF------VQLCEIHEIPYVALK--LE-HGKKLTKEKLYEYDNQ-NFTGLLVNVDE 154 (376)
T ss_dssp HHHHHHHCCTTCCEEEEESSHHHHHH------HHHHHHTTCCEEEEE--CC-TTCCCCHHHHHTTTTS-CCCEEEEESEE
T ss_pred HHHHHhccCCCCeEEEEeCChhhHHH------HHHHHHcCCceEEEe--CC-CCCCCCHHHHHHhhcc-CceEEEEeccc
Confidence 87999999999999999853333210 012234455565565 33 4578999999998876 89999997 55
Q ss_pred C-CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCCcceEEEeCCCCCCCCCCc-eEEEEecchhhhhcc
Q 023191 205 A-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEINKQ 280 (286)
Q Consensus 205 n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~g-G~l~~~~~~~~~~~~ 280 (286)
| +|...|+++|.++|++||+++|+|++|+.+....+.... ++|++++|+||+|+|+.| |++++++++.+..++
T Consensus 155 nptG~~~~l~~i~~l~~~~~~~li~D~~~~~~~~~~~~~~~---~~d~~~~s~~K~l~~~~G~g~~~~~~~~~~~~~~ 229 (376)
T 3f0h_A 155 TSTAVLYDTMMIGEFCKKNNMFFVCDCVSAFLADPFNMNEC---GADVMITGSQKVLACPPGISVIVLAPRGVERVEK 229 (376)
T ss_dssp TTTTEECCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHHH---TCSEEEEETTTTTCCCSSCEEEEECHHHHHHHHT
T ss_pred CCcceecCHHHHHHHHHHcCCEEEEEcCccccCcccccccc---CccEEEecCcccccCCCceEEEEECHHHHHHhhc
Confidence 5 778889999999999999999999999877654322222 389999999999987878 999999887765543
No 20
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=99.91 E-value=1.5e-23 Score=190.97 Aligned_cols=216 Identities=17% Similarity=0.201 Sum_probs=157.9
Q ss_pred HHcCceecCCCC-CCCHHHHHHhccccc--cCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCC
Q 023191 45 QWKGLELIPSEN-FTSVSVMQAVGSVMT--NKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSG 121 (286)
Q Consensus 45 ~~~~i~L~~~e~-~~~~~v~~a~~~~l~--~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG 121 (286)
..+.+.|+.+.+ ++++.+++++.+.+. +.+ +++....+.......+..+.+++++++++|++++ +|++++|
T Consensus 20 ~~~~iyld~~~~~~~~~~v~~a~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~----~v~~~~g 93 (423)
T 3lvm_A 20 MKLPIYLDYSATTPVDPRVAEKMMQFMTMDGTF--GNPASRSHRFGWQAEEAVDIARNQIADLVGADPR----EIVFTSG 93 (423)
T ss_dssp CCSSEECBTTTCCCCCHHHHHHHTTSSSTTSCC--SCTTCTTSHHHHHHHHHHHHHHHHHHHHHTCCGG----GEEEESS
T ss_pred cCCCEeecCCCcCCCCHHHHHHHHHHHhhcccc--cCCCccccchhHHHHHHHHHHHHHHHHHcCCCCC----eEEEeCC
Confidence 346677765444 679999999999887 544 2222201111223456667788999999999764 4999999
Q ss_pred hH-HHHHHHHHhcC----CCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCC
Q 023191 122 SP-SNFQVYTALLK----PHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRP 196 (286)
Q Consensus 122 ~~-a~~~~l~a~~~----~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~t 196 (286)
++ ++.+++.++.+ +||+|+++++.|+++...... ....|.+++.++ .+ +++.+|+++|++++++ ++
T Consensus 94 gt~a~~~a~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~~~-----~~~~g~~~~~v~--~~-~~~~~d~~~l~~~i~~-~~ 164 (423)
T 3lvm_A 94 ATESDNLAIKGAANFYQKKGKHIITSKTEHKAVLDTCRQ-----LEREGFEVTYLA--PQ-RNGIIDLKELEAAMRD-DT 164 (423)
T ss_dssp HHHHHHHHHHHHHHHHTTTCCEEEEETTSCHHHHHHHHH-----HHHTTCEEEEEC--CC-TTSCCCHHHHHHHCCT-TE
T ss_pred hHHHHHHHHHHHHHhhccCCCEEEECCccchHHHHHHHH-----HHHcCCEEEEec--cC-CCCccCHHHHHHhcCC-Cc
Confidence 88 88878887773 899999999777766432211 123365555554 44 4688999999999987 89
Q ss_pred cEEEEc-CCC-CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCCcceEEEeCCCCCCCCCCc-eEEEEecc
Q 023191 197 KLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKG 273 (286)
Q Consensus 197 k~v~i~-~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~g-G~l~~~~~ 273 (286)
++|+++ ++| +|...|+++|.++|++||+++|+|++|+.+....+.... ++|++++|+||++ ||.| |+++++++
T Consensus 165 ~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~---~~di~~~s~sK~~-g~~g~G~~~~~~~ 240 (423)
T 3lvm_A 165 ILVSIMHVNNEIGVVQDIAAIGEMCRARGIIYHVDATQSVGKLPIDLSQL---KVDLMSFSGHKIY-GPKGIGALYVRRK 240 (423)
T ss_dssp EEEECCSBCTTTCBBCCHHHHHHHHHHHTCEEEEECTTTTTTSCCCTTTS---CCSEEEEESTTTT-SCSSCEEEEECBT
T ss_pred EEEEEeCCCCCCccccCHHHHHHHHHHcCCEEEEEhhhhcCCCCcChhhc---CCCEEEechHHhc-CCCCeEEEEEecc
Confidence 999987 555 778899999999999999999999999887665444333 3899999999955 5666 99999977
Q ss_pred hhhhhc
Q 023191 274 VKEINK 279 (286)
Q Consensus 274 ~~~~~~ 279 (286)
..+..+
T Consensus 241 ~~~~~~ 246 (423)
T 3lvm_A 241 PRVRIE 246 (423)
T ss_dssp TBCCCC
T ss_pred ccCCCC
Confidence 654443
No 21
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=99.90 E-value=5e-24 Score=190.75 Aligned_cols=198 Identities=17% Similarity=0.203 Sum_probs=150.3
Q ss_pred CCCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-HHHHHHHHhc-
Q 023191 56 NFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALL- 133 (286)
Q Consensus 56 ~~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l~a~~- 133 (286)
.++++.+++++.+.+.+.+ +++.. .+.......++.+++++++++++|++++ +|++++|++ ++.+++.++.
T Consensus 10 ~~~~~~v~~a~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~la~~~~~~~~----~i~~~~g~~~a~~~~~~~~~~ 82 (382)
T 4hvk_A 10 KPVDERILEAMLPYMTESF--GNPSS-VHSYGFKAREAVQEAREKVAKLVNGGGG----TVVFTSGATEANNLAIIGYAM 82 (382)
T ss_dssp CCCCHHHHHHHHHHHHTSC--CCTTC-SSHHHHHHHHHHHHHHHHHHHHTTCTTE----EEEEESSHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhhc--CCCcc-cchHHHHHHHHHHHHHHHHHHHcCCCcC----eEEEECCchHHHHHHHHHhhh
Confidence 3678999999999886644 33332 1222234456777888999999999763 599999999 8887888887
Q ss_pred ---CCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCC
Q 023191 134 ---KPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YAR 208 (286)
Q Consensus 134 ---~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~-~~n-~g~ 208 (286)
+|||+|+++++.|+++...... ....|.+++.++ .+ +++.+|+++|++++++ ++++|+++ ++| +|.
T Consensus 83 ~~~~~gd~vi~~~~~~~~~~~~~~~-----~~~~g~~~~~v~--~~-~~~~~d~~~l~~~i~~-~~~~v~~~~~~nptG~ 153 (382)
T 4hvk_A 83 RNARKGKHILVSAVEHMSVINPAKF-----LQKQGFEVEYIP--VG-KYGEVDVSFIDQKLRD-DTILVSVQHANNEIGT 153 (382)
T ss_dssp HHGGGCCEEEEETTCCHHHHHHHHH-----HHHTTCEEEEEC--BC-TTSCBCHHHHHHHCCT-TEEEEECCSBCTTTCB
T ss_pred hhcCCCCEEEECCCCcHHHHHHHHH-----HHhcCCEEEEec--cC-CCCCcCHHHHHHHhcc-CceEEEEECCCCCcee
Confidence 9999999999888776543221 112355555554 44 5678999999999987 89999987 666 778
Q ss_pred ccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCCcceEEEeCCCCCCCCCCc-eEEEEecch
Q 023191 209 LYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGV 274 (286)
Q Consensus 209 ~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~g-G~l~~~~~~ 274 (286)
..|+++|.++|++||+ +|+|++|+.|....+.... ++|++++|+||++ ||.| |+++++++.
T Consensus 154 ~~~~~~i~~l~~~~~~-li~D~a~~~~~~~~~~~~~---~~d~~~~s~~K~~-g~~g~g~~~~~~~~ 215 (382)
T 4hvk_A 154 IQPVEEISEVLAGKAA-LHIDATASVGQIEVDVEKI---GADMLTISSNDIY-GPKGVGALWIRKEA 215 (382)
T ss_dssp BCCHHHHHHHHSSSSE-EEEECTTTBTTBCCCHHHH---TCSEEEEESGGGT-SCTTCEEEEEETTC
T ss_pred eCCHHHHHHHHHHcCE-EEEEhHHhcCCCCCCchhc---CCCEEEEeHHHhc-CCCceEEEEEcCcc
Confidence 8999999999999999 9999999887654333222 3899999999965 6777 999998764
No 22
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=99.90 E-value=3.6e-23 Score=186.46 Aligned_cols=203 Identities=14% Similarity=0.094 Sum_probs=150.1
Q ss_pred ceec-CCCCCCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-HHH
Q 023191 49 LELI-PSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNF 126 (286)
Q Consensus 49 i~L~-~~e~~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~ 126 (286)
+-|. ++..++++.+++++.+.+.+.+ + .......+.+++++++++|++++ +|++|+|++ ++.
T Consensus 10 ~yl~~~~~~~~~~~v~~a~~~~~~~~~----------~--~~~~~~~~~l~~~la~~~g~~~~----~v~~t~g~t~a~~ 73 (392)
T 2z9v_A 10 VITLTAGPVNAYPEVLRGLGRTVLYDY----------D--PAFQLLYEKVVDKAQKAMRLSNK----PVILHGEPVLGLE 73 (392)
T ss_dssp SEECSSSCCCCCHHHHHHTTSCCCCTT----------S--HHHHHHHHHHHHHHHHHTTCSSC----CEEESSCTHHHHH
T ss_pred ceeecCCCcCCCHHHHHHHhccccccc----------c--HHHHHHHHHHHHHHHHHhCCCCC----EEEEeCCchHHHH
Confidence 3343 3444679999999988765411 0 12234455677999999998754 499999988 888
Q ss_pred HHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhh-cCCcEEEEc-CC
Q 023191 127 QVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATL-FRPKLIVAG-AS 204 (286)
Q Consensus 127 ~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~-~~tk~v~i~-~~ 204 (286)
+++.+++++||+|+++++.|.++. .. ..+...|.+++.++ .+ +++.+|++++++.+++ .++++|+++ ++
T Consensus 74 ~~~~~~~~~gd~Vl~~~~~~~~~~--~~----~~~~~~g~~~~~v~--~~-~~~~~d~~~l~~~l~~~~~~~~v~~~~~~ 144 (392)
T 2z9v_A 74 AAAASLISPDDVVLNLASGVYGKG--FG----YWAKRYSPHLLEIE--VP-YNEAIDPQAVADMLKAHPEITVVSVCHHD 144 (392)
T ss_dssp HHHHHHCCTTCCEEEEESSHHHHH--HH----HHHHHHCSCEEEEE--CC-TTSCCCHHHHHHHHHHCTTCCEEEEESEE
T ss_pred HHHHHhcCCCCEEEEecCCcccHH--HH----HHHHHcCCceEEee--CC-CCCCCCHHHHHHHHhcCCCCcEEEEeccC
Confidence 889999999999999997766541 11 11223465565565 44 3467999999999953 278999887 55
Q ss_pred C-CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCCcceEEEeCCCCCCCCCCc-eEEEEecchhhhhc
Q 023191 205 A-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEINK 279 (286)
Q Consensus 205 n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~g-G~l~~~~~~~~~~~ 279 (286)
| +|...|+++|.++|++||+++|+|++|+.|....++... ++|++++|+||+++||.| |++++++++.+..+
T Consensus 145 nptG~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~---~~d~~~~s~sK~~~~~~g~G~l~~~~~~~~~l~ 218 (392)
T 2z9v_A 145 TPSGTINPIDAIGALVSAHGAYLIVDAVSSFGGMKTHPEDC---KADIYVTGPNKCLGAPPGLTMMGVSERAWAKMK 218 (392)
T ss_dssp GGGTEECCHHHHHHHHHHTTCEEEEECTTTBTTBSCCGGGG---TCSEEEECSSSTTCCCSCCEEEEECHHHHHHHH
T ss_pred CCCceeccHHHHHHHHHHcCCeEEEEcccccCCcccccccc---cceEEEecCcccccCCCceeEEEECHHHHHHhh
Confidence 5 678889999999999999999999999877654333222 389999999999999888 99999988765443
No 23
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=99.90 E-value=2.3e-23 Score=187.89 Aligned_cols=235 Identities=12% Similarity=0.054 Sum_probs=166.1
Q ss_pred cccccChHHHHHHHHHHHHHHcCceecCCCCC--CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHH
Q 023191 26 PLEVVDPEIADIIEHEKARQWKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALE 103 (286)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~i~L~~~e~~--~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 103 (286)
+...+++..+..+.+...+..+.++|..+++. +++.+.+++.+.+.... .+ |+...+..++++++.+++.+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~-~~------y~~~~g~~~l~~~la~~~~~ 78 (389)
T 1gd9_A 6 RLELVSASEIRKLFDIAAGMKDVISLGIGEPDFDTPQHIKEYAKEALDKGL-TH------YGPNIGLLELREAIAEKLKK 78 (389)
T ss_dssp HHHHSCCCHHHHHHHHHHTCSSCEECCCCSCSSCCCHHHHHHHHHHHHTTC-CS------CCCTTCCHHHHHHHHHHHHH
T ss_pred HhHhCChhHHHHHHHHHhhhcCeEecCCCCCCCCCCHHHHHHHHHHHhCCC-CC------CCCCCCcHHHHHHHHHHHHH
Confidence 34445555555555543332467899888774 58899999988775421 12 33334567899899999988
Q ss_pred HCCCCCCCccee-EEeCCChH-HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCC
Q 023191 104 AFRLDPEKWGVN-VQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGY 181 (286)
Q Consensus 104 ~~g~~~~~~~~~-v~~~sG~~-a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~ 181 (286)
.+|++.+. .+ |++|+|++ ++.+++.+++++||+|+++++.|.++.. .+...|.+++.++++.+ +++.
T Consensus 79 ~~g~~~~~--~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~--------~~~~~g~~~~~v~~~~~-~~~~ 147 (389)
T 1gd9_A 79 QNGIEADP--KTEIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAP--------AVILAGGKPVEVPTYEE-DEFR 147 (389)
T ss_dssp HHCCCCCT--TTSEEEESSTTHHHHHHHTTTCCTTCEEEEEESCCTTHHH--------HHHHHTCEEEEEECCGG-GTTC
T ss_pred HhCCCCCC--CCeEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHH--------HHHHCCCEEEEeccCCc-cCCC
Confidence 88853221 36 89999888 8887888999999999999977766532 34456666666654311 2568
Q ss_pred CCHHHHHHHhhhcCCcEEEEc-CCC-CCCcc---CHHHHHHHHHhcCCEEEEeccccccccccC----CCCCC-CCcceE
Q 023191 182 IDYDQLEKSATLFRPKLIVAG-ASA-YARLY---DYERIRKVCNKQKAIMLADMAHISGLVAAG----VIPSP-FEYADV 251 (286)
Q Consensus 182 ~d~e~l~~~i~~~~tk~v~i~-~~n-~g~~~---~l~~I~~ia~~~~~~vivD~a~~~g~~~~~----~~~~~-~~~~D~ 251 (286)
+|++++++.+++ ++++|+++ ++| +|... ++++|+++|++||+++|+|++|+.+..... +.... ..+.|+
T Consensus 148 ~d~~~l~~~l~~-~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i 226 (389)
T 1gd9_A 148 LNVDELKKYVTD-KTRALIINSPCNPTGAVLTKKDLEEIADFVVEHDLIVISDEVYEHFIYDDARHYSIASLDGMFERTI 226 (389)
T ss_dssp CCHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEE
T ss_pred CCHHHHHHhcCc-CceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCCCCHhhccCCCCCEE
Confidence 999999999987 88998887 666 67665 488999999999999999999886654321 11110 124789
Q ss_pred EEeCCCCCCCCC--CceEEEEecchhhhhc
Q 023191 252 VTTTTHKSLRGP--RGAMIFFRKGVKEINK 279 (286)
Q Consensus 252 v~~s~~K~l~gp--~gG~l~~~~~~~~~~~ 279 (286)
++.|+||+|+.| +.|++++++++.+..+
T Consensus 227 ~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~ 256 (389)
T 1gd9_A 227 TVNGFSKTFAMTGWRLGFVAAPSWIIERMV 256 (389)
T ss_dssp EEEESTTTTTCGGGCCEEEECCHHHHHHHH
T ss_pred EEecChhhcCCcccceEEEEECHHHHHHHH
Confidence 999999988533 3499999987765544
No 24
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.90 E-value=1.8e-23 Score=188.89 Aligned_cols=214 Identities=14% Similarity=0.093 Sum_probs=155.9
Q ss_pred cCceecCCCCC--CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-
Q 023191 47 KGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP- 123 (286)
Q Consensus 47 ~~i~L~~~e~~--~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~- 123 (286)
+.++|..+++. +++.+++++.+.+.... .+ |+...+..++++++.+++.+.+|++.+. .+|++++|++
T Consensus 42 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~-~~------y~~~~g~~~lr~~la~~~~~~~g~~~~~--~~v~~~~g~t~ 112 (389)
T 1o4s_A 42 DVINLTAGEPDFPTPEPVVEEAVRFLQKGE-VK------YTDPRGIYELREGIAKRIGERYKKDISP--DQVVVTNGAKQ 112 (389)
T ss_dssp CCEECCCSSCSSCCCHHHHHHHHHHHTTCC-CC------CCCTTCCHHHHHHHHHHHHHHHTCCCCG--GGEEEESHHHH
T ss_pred CEEEccCCCCCCCCCHHHHHHHHHHHhcCC-CC------CCCCCCCHHHHHHHHHHHHHHhCCCCCH--HHEEEecCHHH
Confidence 67899888773 57899999988775421 12 3333566789999999998888873221 3599999998
Q ss_pred HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-
Q 023191 124 SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG- 202 (286)
Q Consensus 124 a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~- 202 (286)
++..++.+++++||+|+++++.|.++.. .+...|.+++.++++.+ +++.+|+++|++++++ ++++|+++
T Consensus 113 al~~~~~~l~~~gd~Vl~~~~~~~~~~~--------~~~~~g~~~~~v~~~~~-~~~~~d~~~l~~~l~~-~~~~v~~~~ 182 (389)
T 1o4s_A 113 ALFNAFMALLDPGDEVIVFSPVWVSYIP--------QIILAGGTVNVVETFMS-KNFQPSLEEVEGLLVG-KTKAVLINS 182 (389)
T ss_dssp HHHHHHHHHCCTTCEEEEEESCCTTHHH--------HHHHTTCEEEEEECCGG-GTTCCCHHHHHHTCCT-TEEEEEEES
T ss_pred HHHHHHHHhCCCCCEEEEcCCCchhHHH--------HHHHcCCEEEEEecCCc-cCCCCCHHHHHHhccc-CceEEEEcC
Confidence 8888899999999999999976665532 34456666665654321 3578999999999987 88998887
Q ss_pred CCC-CCCccC---HHHHHHHHHhcCCEEEEeccccccccccCCCC-CCC---CcceEEEeCCCCCCCCC--CceEEEEec
Q 023191 203 ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVIP-SPF---EYADVVTTTTHKSLRGP--RGAMIFFRK 272 (286)
Q Consensus 203 ~~n-~g~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~-~~~---~~~D~v~~s~~K~l~gp--~gG~l~~~~ 272 (286)
++| +|...+ +++|+++|++||+++|+|++|+.+........ ..+ .+.|++++|+||+|+.| +.|++++++
T Consensus 183 p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~l~~~~ 262 (389)
T 1o4s_A 183 PNNPTGVVYRREFLEGLVRLAKKRNFYIISDEVYDSLVYTDEFTSILDVSEGFDRIVYINGFSKSHSMTGWRVGYLISSE 262 (389)
T ss_dssp SCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCSSCCCCHHHHCSSSTTEEEEEESTTTTTCGGGCCEEEECCH
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCHhhcCCCCCcEEEEeechhhcCCcccceEEEEeCH
Confidence 666 676666 89999999999999999999886544211000 001 24799999999998533 359999988
Q ss_pred chhhhhc
Q 023191 273 GVKEINK 279 (286)
Q Consensus 273 ~~~~~~~ 279 (286)
++.+..+
T Consensus 263 ~~~~~l~ 269 (389)
T 1o4s_A 263 KVATAVS 269 (389)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7765543
No 25
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=99.90 E-value=1.9e-23 Score=188.70 Aligned_cols=214 Identities=15% Similarity=0.142 Sum_probs=155.3
Q ss_pred CceecCCCC-CCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCC-CCCCcceeEEeCCChH-H
Q 023191 48 GLELIPSEN-FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRL-DPEKWGVNVQSLSGSP-S 124 (286)
Q Consensus 48 ~i~L~~~e~-~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~-~~~~~~~~v~~~sG~~-a 124 (286)
.+.|..+.+ ++|+.+++++.+.+.+.+ +.+....+............+++.+++++|. +++ +|++++|++ +
T Consensus 24 ~i~l~~~~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~----~v~~~~g~t~a 97 (406)
T 1kmj_A 24 LAYLDSAASAQKPSQVIDAEAEFYRHGY--AAVHRGIHTLSAQATEKMENVRKRASLFINARSAE----ELVFVRGTTEG 97 (406)
T ss_dssp CEECCTTTCCCCCHHHHHHHHHHHHHTC--CCCSSCSSHHHHHHHHHHHHHHHHHHHHTTCSCGG----GEEEESSHHHH
T ss_pred eEEecCCccCCCCHHHHHHHHHHHHhhc--CCCCCCcchHHHHHHHHHHHHHHHHHHHcCCCCCC----eEEEeCChhHH
Confidence 577876665 578999999998886532 1111100000011234445577899999998 443 599999998 8
Q ss_pred HHHHHHHh----cCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEE
Q 023191 125 NFQVYTAL----LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIV 200 (286)
Q Consensus 125 ~~~~l~a~----~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~ 200 (286)
+.+++.++ +++||+|+++++.|.+...+... .+...|.+++.++ .+ +++.+|++++++++++ ++++|+
T Consensus 98 ~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~----~~~~~g~~~~~~~--~~-~~~~~d~~~l~~~l~~-~~~~v~ 169 (406)
T 1kmj_A 98 INLVANSWGNSNVRAGDNIIISQMEHHANIVPWQM----LCARVGAELRVIP--LN-PDGTLQLETLPTLFDE-KTRLLA 169 (406)
T ss_dssp HHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHH----HHHHHTCEEEEEC--BC-TTSCBCGGGHHHHCCT-TEEEEE
T ss_pred HHHHHHHhhhhcCCCCCEEEEecccchHHHHHHHH----HHHhCCCEEEEEe--cC-CCCCcCHHHHHHHhcc-CCeEEE
Confidence 88899999 89999999999888776533211 1234465555555 44 4578999999999987 899999
Q ss_pred Ec-CCC-CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCCcceEEEeCCCCCCCCCCc-eEEEEecchhhh
Q 023191 201 AG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEI 277 (286)
Q Consensus 201 i~-~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~g-G~l~~~~~~~~~ 277 (286)
++ ++| +|...|+++|.++|++||+++|+|++|+.|....+.... ++|++++|+||++ ||.| |++++++++.+.
T Consensus 170 ~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~~~~~g~~~~~~~~~---~~d~~~~s~~K~~-g~~G~G~~~~~~~~~~~ 245 (406)
T 1kmj_A 170 ITHVSNVLGTENPLAEMITLAHQHGAKVLVDGAQAVMHHPVDVQAL---DCDFYVFSGHKLY-GPTGIGILYVKEALLQE 245 (406)
T ss_dssp EESBCTTTCCBCCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHHH---TCSEEEEEGGGTT-SCTTCEEEEECHHHHHH
T ss_pred EeCCCccccCcCCHHHHHHHHHHcCCEEEEEchhhcCCCCCccccc---CCCEEEEEchhcc-CCCCcEEEEEeHHHHhh
Confidence 87 555 778899999999999999999999999877543221111 4899999999988 7777 999999887665
Q ss_pred hc
Q 023191 278 NK 279 (286)
Q Consensus 278 ~~ 279 (286)
.+
T Consensus 246 ~~ 247 (406)
T 1kmj_A 246 MP 247 (406)
T ss_dssp CC
T ss_pred cC
Confidence 54
No 26
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=99.90 E-value=6.5e-23 Score=184.82 Aligned_cols=215 Identities=15% Similarity=0.075 Sum_probs=155.6
Q ss_pred HcCceecCCCCC--CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH
Q 023191 46 WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP 123 (286)
Q Consensus 46 ~~~i~L~~~e~~--~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~ 123 (286)
.+.++|..+++. +++.+.+++.+.+.+.. .+ |+...+..++++++.+++.+.+|++.+. .+|++|+|++
T Consensus 30 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~-~~------y~~~~g~~~l~~~la~~~~~~~g~~~~~--~~v~~~~g~~ 100 (388)
T 1j32_A 30 IDVCSFSAGEPDFNTPKHIVEAAKAALEQGK-TR------YGPAAGEPRLREAIAQKLQRDNGLCYGA--DNILVTNGGK 100 (388)
T ss_dssp CCCEECCCSSCSSCCCHHHHHHHHHHHHTTC-CS------CCCTTCCHHHHHHHHHHHHHHHCCCCCG--GGEEEESHHH
T ss_pred CCEEECCCCCCCCCCCHHHHHHHHHHHhcCC-CC------CCCCCCCHHHHHHHHHHHHHhcCCCCCh--hhEEEcCCHH
Confidence 357899888773 57899999988775421 12 3444567889999999999888864322 3599999988
Q ss_pred -HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc
Q 023191 124 -SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG 202 (286)
Q Consensus 124 -a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~ 202 (286)
++.+++.+++++||+|+++++.|.++.. .+...|.+++.++.+.+ +++.+|+++|++.+++ ++++|+++
T Consensus 101 ~a~~~~~~~~~~~gd~vl~~~~~~~~~~~--------~~~~~g~~~~~v~~~~~-~~~~~d~~~l~~~l~~-~~~~v~~~ 170 (388)
T 1j32_A 101 QSIFNLMLAMIEPGDEVIIPAPFWVSYPE--------MVKLAEGTPVILPTTVE-TQFKVSPEQIRQAITP-KTKLLVFN 170 (388)
T ss_dssp HHHHHHHHHHCCTTCEEEEESSCCTHHHH--------HHHHTTCEEEEECCCGG-GTTCCCHHHHHHHCCT-TEEEEEEE
T ss_pred HHHHHHHHHhcCCCCEEEEcCCCChhHHH--------HHHHcCCEEEEecCCcc-cCCCCCHHHHHHhcCc-CceEEEEe
Confidence 8888999999999999999977665432 34456665655553321 2578999999999987 89999887
Q ss_pred -CCC-CCCcc---CHHHHHHHHHhcCCEEEEeccccccccccCCCCC--CC----CcceEEEeCCCCCCC--CCCceEEE
Q 023191 203 -ASA-YARLY---DYERIRKVCNKQKAIMLADMAHISGLVAAGVIPS--PF----EYADVVTTTTHKSLR--GPRGAMIF 269 (286)
Q Consensus 203 -~~n-~g~~~---~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~--~~----~~~D~v~~s~~K~l~--gp~gG~l~ 269 (286)
++| +|... ++++|+++|++||+++|+|++|+........... .+ .+.|+++.|+||+++ |.+.|+++
T Consensus 171 ~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~G~r~G~~~ 250 (388)
T 1j32_A 171 TPSNPTGMVYTPDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGAASPEAYERSVVCSGFAKTYAMTGWRVGFLA 250 (388)
T ss_dssp SSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEEESTTTTTCTTTCCEEEE
T ss_pred CCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCCCHHHccccccCCEEEEeechhccCCcccceEEEE
Confidence 666 67654 4899999999999999999998764432111111 11 137899999999984 33459999
Q ss_pred Eecchhhhhc
Q 023191 270 FRKGVKEINK 279 (286)
Q Consensus 270 ~~~~~~~~~~ 279 (286)
+++++.+..+
T Consensus 251 ~~~~~~~~l~ 260 (388)
T 1j32_A 251 GPVPLVKAAT 260 (388)
T ss_dssp CCHHHHHHHH
T ss_pred eCHHHHHHHH
Confidence 9887765443
No 27
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=99.90 E-value=1.4e-23 Score=187.67 Aligned_cols=209 Identities=15% Similarity=0.102 Sum_probs=147.6
Q ss_pred cCceecCC--CCCCCHHHHHHhccccccCCCCCCC--CCcccCCcchHHHHHHHHHHH-HHHHCCCCCCCcceeEEeCCC
Q 023191 47 KGLELIPS--ENFTSVSVMQAVGSVMTNKYSEGYP--GARYYGGNEYIDMAESLCQKR-ALEAFRLDPEKWGVNVQSLSG 121 (286)
Q Consensus 47 ~~i~L~~~--e~~~~~~v~~a~~~~l~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~-~~~~~g~~~~~~~~~v~~~sG 121 (286)
+.+.|+.+ .+++++.+++++.+.+.......+. ....+.......+ ++++ +++++|.+ . |++++|
T Consensus 8 ~~i~ld~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----l~~~~la~~~~~~--~----v~~~~g 77 (371)
T 2e7j_A 8 DFINIDPLQTGGKLTEEARQALLEWGDGYSVCDFCTTGRLDEIKTPPIHD----FIHNQLPKFLGCD--V----ARVTNG 77 (371)
T ss_dssp CCEECCHHHHTCCCCHHHHHHHHHC--------------------CCHHH----HHHTHHHHHTTSS--E----EEEESS
T ss_pred CcEEecccccCCCCCHHHHHHHHHHHhhcccCCccccccchhhHHHHHHH----HHHHHHHHHcCCC--E----EEEeCC
Confidence 45666553 4467999999999887653211111 1111222334444 4478 88888876 2 999999
Q ss_pred hH-HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhh----cCC
Q 023191 122 SP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATL----FRP 196 (286)
Q Consensus 122 ~~-a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~----~~t 196 (286)
++ ++.+++.+++++||+|+++++.|.++.. .+...|.+++.++.+.+ +++.+|++++++.+++ .++
T Consensus 78 ~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~--------~~~~~g~~~~~v~~~~~-~~~~~d~~~l~~~l~~~~~~~~~ 148 (371)
T 2e7j_A 78 AREAKFAVMHSLAKKDAWVVMDENCHYSSYV--------AAERAGLNIALVPKTDY-PDYAITPENFAQTIEETKKRGEV 148 (371)
T ss_dssp HHHHHHHHHHHHCCTTCEEEEETTCCHHHHH--------HHHHTTCEEEEECCCCT-TTCCCCHHHHHHHHHHHTTTSCE
T ss_pred hHHHHHHHHHHHhCCCCEEEEccCcchHHHH--------HHHHcCCeEEEeecccC-CCCCcCHHHHHHHHHhhcccCCe
Confidence 87 8888999999999999999977766543 23456666655652244 4588999999999983 278
Q ss_pred cEEEEc-CCC-CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCCcceEEEeCCCCCCCCCCc-eEEEEecc
Q 023191 197 KLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKG 273 (286)
Q Consensus 197 k~v~i~-~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~g-G~l~~~~~ 273 (286)
++|+++ ++| +|...|+++|.++|++||+++|+|++|+.+..+...... ++|++++|+||+|++|.+ |+++++++
T Consensus 149 ~~v~~~~~~nptG~~~~~~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~---~~di~~~s~sK~~~~~~~~G~~~~~~~ 225 (371)
T 2e7j_A 149 VLALITYPDGNYGNLPDVKKIAKVCSEYDVPLLVNGAYAIGRMPVSLKEI---GADFIVGSGHKSMAASGPIGVMGMKEE 225 (371)
T ss_dssp EEEEEESSCTTTCCCCCHHHHHHHHHTTTCCEEEECTTTBTTBCCCHHHH---TCSEEEEEHHHHSSCCSSCEEEEECTT
T ss_pred EEEEEECCCCCCcccCCHHHHHHHHHHcCCeEEEECccccCCCCCChhhc---CCCEEEecCCcCCCCCCCcEEEEEech
Confidence 998887 555 778889999999999999999999999887653222111 379999999999988766 99999998
Q ss_pred hhhh
Q 023191 274 VKEI 277 (286)
Q Consensus 274 ~~~~ 277 (286)
+.+.
T Consensus 226 ~~~~ 229 (371)
T 2e7j_A 226 WAEI 229 (371)
T ss_dssp TTTT
T ss_pred hhhh
Confidence 7665
No 28
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.90 E-value=2.6e-23 Score=184.57 Aligned_cols=196 Identities=13% Similarity=0.081 Sum_probs=147.8
Q ss_pred ceecCCCCCCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-HHHH
Q 023191 49 LELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQ 127 (286)
Q Consensus 49 i~L~~~e~~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~ 127 (286)
++++++..++++.+++++.+.+...+ + .........+++++++++|++++ ++++++|++ ++.+
T Consensus 3 ~l~~~~p~~~~~~v~~a~~~~~~~~~---------~---~~~~~~~~~l~~~la~~~g~~~~----~i~~~~g~t~a~~~ 66 (352)
T 1iug_A 3 WLLTPGPVRLHPKALEALARPQLHHR---------T---EAAREVFLKARGLLREAFRTEGE----VLILTGSGTLAMEA 66 (352)
T ss_dssp EECSSSSCCCCHHHHHHHHSCCCCTT---------S---HHHHHHHHHHHHHHHHHHTCSSE----EEEEESCHHHHHHH
T ss_pred ccccCCCCCCCHHHHHHhccCCCCcc---------C---HHHHHHHHHHHHHHHHHhCCCCc----eEEEcCchHHHHHH
Confidence 56778888899999999988764311 0 12234445677889999998753 599999988 8888
Q ss_pred HHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-
Q 023191 128 VYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA- 205 (286)
Q Consensus 128 ~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~-~~n- 205 (286)
++.+++++||+|+++++.|.++. .. ..+...|.+++.++ .+ +++.+|++++++ + ++++|+++ ++|
T Consensus 67 ~~~~~~~~gd~vl~~~~~~~~~~--~~----~~~~~~g~~~~~v~--~~-~~~~~d~~~l~~---~-~~~~v~~~~~~np 133 (352)
T 1iug_A 67 LVKNLFAPGERVLVPVYGKFSER--FY----EIALEAGLVVERLD--YP-YGDTPRPEDVAK---E-GYAGLLLVHSETS 133 (352)
T ss_dssp HHHHHCCTTCEEEEEECSHHHHH--HH----HHHHHTTCEEEEEE--CC-TTCCCCTTTSCC---S-SCSEEEEESEETT
T ss_pred HHHhccCCCCeEEEEeCCchhHH--HH----HHHHHcCCceEEEe--CC-CCCCCCHHHHhc---c-CCcEEEEEEecCC
Confidence 99999999999999997666652 10 01223465565565 44 456789888877 4 89999987 555
Q ss_pred CCCccCHHHHHHHHHhc--CCEEEEeccccccccccCCCCCCCCcceEEEeCCCCCCCCCCc-eEEEEecchhh
Q 023191 206 YARLYDYERIRKVCNKQ--KAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKE 276 (286)
Q Consensus 206 ~g~~~~l~~I~~ia~~~--~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~g-G~l~~~~~~~~ 276 (286)
+|...|+++|.++|++| |+++|+|++|+.|....+.... ++|++++|+|||++||.| |++++++++.+
T Consensus 134 tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~---~~d~~~~s~~K~~~~~~g~G~~~~~~~~~~ 204 (352)
T 1iug_A 134 TGALADLPALARAFKEKNPEGLVGADMVTSLLVGEVALEAM---GVDAAASGSQKGLMCPPGLGFVALSPRALE 204 (352)
T ss_dssp TTEECCHHHHHHHHHHHCTTCEEEEECTTTBTTBCCCSGGG---TCSEEEEESSSTTCCCSCEEEEEECHHHHH
T ss_pred cceecCHHHHHHHHHhhCCCCEEEEECCccccCcceecccc---CeeEEEecCcccccCCCceeEEEECHHHHH
Confidence 67889999999999999 9999999999877654332222 389999999999999988 99999887553
No 29
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=99.90 E-value=5.4e-23 Score=184.45 Aligned_cols=205 Identities=17% Similarity=0.250 Sum_probs=148.3
Q ss_pred eecCCCC-CCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-HHHH
Q 023191 50 ELIPSEN-FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQ 127 (286)
Q Consensus 50 ~L~~~e~-~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~ 127 (286)
.|+.+.+ ++++.+++++.+.+.+.|.+ +...+ ............+++++++++|++++ +|++++|++ ++.+
T Consensus 4 yld~~~~~~~~~~v~~a~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~l~~~la~~~g~~~~----~v~~~~g~t~a~~~ 76 (384)
T 1eg5_A 4 YFDNNATTRVDDRVLEEMIVFYREKYGN--PNSAH-GMGIEANLHMEKAREKVAKVLGVSPS----EIFFTSCATESINW 76 (384)
T ss_dssp ECBTTTCCCCCHHHHHHHHHHHHTCCCC--TTCSS-HHHHHHHHHHHHHHHHHHHHHTSCGG----GEEEESCHHHHHHH
T ss_pred EEecCccCCCCHHHHHHHHHHHHhcCCC--Ccccc-HHHHHHHHHHHHHHHHHHHHcCCCCC----eEEEECCHHHHHHH
Confidence 4444444 67999999999988764422 21100 00011234445567888888998764 499999988 8887
Q ss_pred HHHHhc----CCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-
Q 023191 128 VYTALL----KPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG- 202 (286)
Q Consensus 128 ~l~a~~----~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~- 202 (286)
++.++. ++||+|+++++.|+++..... .+...|.+++.++ .+ +++.+|+++|++.+++ ++++|+++
T Consensus 77 ~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~-----~~~~~g~~~~~v~--~~-~~~~~d~~~l~~~i~~-~~~~v~~~~ 147 (384)
T 1eg5_A 77 ILKTVAETFEKRKRTIITTPIEHKAVLETMK-----YLSMKGFKVKYVP--VD-SRGVVKLEELEKLVDE-DTFLVSIMA 147 (384)
T ss_dssp HHHHHHHHTTTTCCEEEECTTSCHHHHHHHH-----HHHHTTCEEEECC--BC-TTSCBCHHHHHHHCCT-TEEEEEEES
T ss_pred HHHhhhhhccCCCCEEEECCCCchHHHHHHH-----HHHhcCCEEEEEc--cC-CCCccCHHHHHHHhCC-CCeEEEEEC
Confidence 888887 899999999977766533221 1123455555454 44 4578999999999987 89999987
Q ss_pred CCC-CCCccCHHHHHHHHHhcC--CEEEEeccccccccccCCCCCCCCcceEEEeCCCCCCCCCCc-eEEEEecch
Q 023191 203 ASA-YARLYDYERIRKVCNKQK--AIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGV 274 (286)
Q Consensus 203 ~~n-~g~~~~l~~I~~ia~~~~--~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~g-G~l~~~~~~ 274 (286)
++| +|...|+++|.++|++|| +++|+|++|+.|....++... ++|++++|+||++ ||.| |++++++++
T Consensus 148 ~~nptG~~~~~~~i~~l~~~~~~~~~li~Dea~~~~~~~~~~~~~---~~di~~~s~sK~~-g~~G~G~~~~~~~~ 219 (384)
T 1eg5_A 148 ANNEVGTIQPVEDVTRIVKKKNKETLVHVDAVQTIGKIPFSLEKL---EVDYASFSAHKFH-GPKGVGITYIRKGV 219 (384)
T ss_dssp BCTTTCBBCCHHHHHHHHHHHCTTCEEEEECTTTTTTSCCCCTTT---CCSEEEEEGGGGT-SCTTCEEEEECTTS
T ss_pred CCCCcccccCHHHHHHHHHhcCCceEEEEEhhhhcCCcccCchhc---CCCEEEecHHHhc-CCCceEEEEEcCCC
Confidence 555 678899999999999999 999999999876544333222 4899999999974 6777 999999876
No 30
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=99.89 E-value=7.7e-23 Score=181.24 Aligned_cols=203 Identities=14% Similarity=0.077 Sum_probs=150.7
Q ss_pred ceecCCCCCCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-HHHH
Q 023191 49 LELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQ 127 (286)
Q Consensus 49 i~L~~~e~~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~ 127 (286)
++|+++..++|+.+++++.+.+.+.+ + ....+..+++++++++++|++.+. .+|++|+|++ ++..
T Consensus 2 ~~~~~gp~~~~~~v~~a~~~~~~~~~---------~---~~~~~~~~~l~~~la~~~g~~~~~--~~v~~t~g~t~a~~~ 67 (353)
T 2yrr_A 2 LLLTPGPTPIPERVQKALLRPMRGHL---------D---PEVLRVNRAIQERLAALFDPGEGA--LVAALAGSGSLGMEA 67 (353)
T ss_dssp EECSSSSCCCCHHHHGGGGSCCCCTT---------C---HHHHHHHHHHHHHHHHHHCCCTTC--EEEEESSCHHHHHHH
T ss_pred ccCCCCCCCCCHHHHHHHhccccccc---------C---HHHHHHHHHHHHHHHHHhCCCCCC--ceEEEcCCcHHHHHH
Confidence 56788888899999999988765310 1 123355566789999999986222 3699999988 8887
Q ss_pred HHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-
Q 023191 128 VYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA- 205 (286)
Q Consensus 128 ~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~-~~n- 205 (286)
++.++++ |+|+++++.|.++ +. ...+...|.+++.++ .+ +++.+|++++++.+++.++++|+++ ++|
T Consensus 68 ~~~~~~~--d~vl~~~~~~~~~--~~----~~~~~~~g~~~~~v~--~~-~~~~~d~~~l~~~l~~~~~~~v~~~~~~np 136 (353)
T 2yrr_A 68 GLANLDR--GPVLVLVNGAFSQ--RV----AEMAALHGLDPEVLD--FP-PGEPVDPEAVARALKRRRYRMVALVHGETS 136 (353)
T ss_dssp HHHTCSC--CCEEEEECSHHHH--HH----HHHHHHTTCCEEEEE--CC-TTSCCCHHHHHHHHHHSCCSEEEEESEETT
T ss_pred HHHHhcC--CcEEEEcCCCchH--HH----HHHHHHcCCceEEEe--CC-CCCCCCHHHHHHHHHhCCCCEEEEEccCCC
Confidence 8888876 8999998766654 11 112234565566665 44 4578999999999976578999887 555
Q ss_pred CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCCcceEEEeCCCCCCCCCCc-eEEEEecchhhhhc
Q 023191 206 YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEINK 279 (286)
Q Consensus 206 ~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~g-G~l~~~~~~~~~~~ 279 (286)
+|...|+++|.++|++||+++|+|++|+.|....++... ++|++++|+|||++||.| |++++++++.+..+
T Consensus 137 tG~~~~~~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~---~~d~~~~s~~K~~~~~~g~G~~~~~~~~~~~l~ 208 (353)
T 2yrr_A 137 TGVLNPAEAIGALAKEAGALFFLDAVTTLGMLPFSMRAM---GVDYAFTGSQKCLSAPPGLAPIAASLEARKAFT 208 (353)
T ss_dssp TTEECCHHHHHHHHHHHTCEEEEECTTTTTTSCCCHHHH---TCSEEECCTTSTTCCCSSCEEEEECHHHHHHCC
T ss_pred cceecCHHHHHHHHHHcCCeEEEEcCccccccccccccc---CceEEEecCcccccCCCceEEEEECHHHHHHhc
Confidence 678889999999999999999999999766443221111 379999999999988888 99999988765443
No 31
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=99.89 E-value=1.7e-22 Score=182.41 Aligned_cols=211 Identities=11% Similarity=0.032 Sum_probs=150.2
Q ss_pred HcCceecCCCCC--CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH
Q 023191 46 WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP 123 (286)
Q Consensus 46 ~~~i~L~~~e~~--~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~ 123 (286)
.+.|+|..++++ +++.+++++.+.+.+.. .+ |+...+..++++++.+++.+.+|++.+. .+|++|+|++
T Consensus 31 ~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~-~~------y~~~~g~~~lr~~ia~~~~~~~g~~~~~--~~v~~t~g~~ 101 (391)
T 3h14_A 31 RRIIHMEVGQPGTGAPRGAVEALAKSLETDA-LG------YTVALGLPALRQRIARLYGEWYGVDLDP--GRVVITPGSS 101 (391)
T ss_dssp CCCEECCCSSCSSCSCHHHHHHHHHHHC-----------------CCHHHHHHHHHHHHHHHCCCCCG--GGEEEESSHH
T ss_pred CCeEEccCCCCCCCCCHHHHHHHHHHHhcCC-CC------CCCCCChHHHHHHHHHHHHHHhCCCCCH--HHEEEecChH
Confidence 477999988874 47889999988776521 12 3334556789999999999888864322 3699999999
Q ss_pred -HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc
Q 023191 124 -SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG 202 (286)
Q Consensus 124 -a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~ 202 (286)
++.+++.+++++||+|+++.+.|.++. ..+...|.+++.++++.+ .++.+|++++++. ++++|+++
T Consensus 102 ~al~~~~~~l~~~gd~vl~~~p~~~~~~--------~~~~~~g~~~~~v~~~~~-~~~~~d~~~l~~~----~~~~v~i~ 168 (391)
T 3h14_A 102 GGFLLAFTALFDSGDRVGIGAPGYPSYR--------QILRALGLVPVDLPTAPE-NRLQPVPADFAGL----DLAGLMVA 168 (391)
T ss_dssp HHHHHHHHHHCCTTCEEEEEESCCHHHH--------HHHHHTTCEEEEEECCGG-GTTSCCHHHHTTS----CCSEEEEE
T ss_pred HHHHHHHHHhcCCCCEEEEcCCCCccHH--------HHHHHcCCEEEEeecCcc-cCCCCCHHHHHhc----CCeEEEEC
Confidence 888899999999999999996555443 344566766666664322 3468899999876 68999887
Q ss_pred -CCC-CCCccC---HHHHHHHHHhcCCEEEEeccccccccccCCCCCC--CCcceEEEeCCCCCCC--CCCceEEEEecc
Q 023191 203 -ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVIPSP--FEYADVVTTTTHKSLR--GPRGAMIFFRKG 273 (286)
Q Consensus 203 -~~n-~g~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~--~~~~D~v~~s~~K~l~--gp~gG~l~~~~~ 273 (286)
++| +|...+ +++|+++|++||+++|+|++|+....... .... +...++++.|++|+++ |.+.|+++++++
T Consensus 169 ~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~-~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~ 247 (391)
T 3h14_A 169 SPANPTGTMLDHAAMGALIEAAQAQGASFISDEIYHGIEYEAK-AVTALELTDECYVINSFSKYFSMTGWRVGWMVVPED 247 (391)
T ss_dssp SSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSC-CCCGGGTCSSSEEEEESSSTTCCTTSCCEEEECCGG
T ss_pred CCCCCCCccCCHHHHHHHHHHHHHcCCEEEEECcchhcccCCC-CcChhhcCCCEEEEEechhccCCccceeEEEEeCHH
Confidence 666 676666 88999999999999999999864332211 1111 1235688999999884 444599999988
Q ss_pred hhhhhc
Q 023191 274 VKEINK 279 (286)
Q Consensus 274 ~~~~~~ 279 (286)
+.+..+
T Consensus 248 ~~~~~~ 253 (391)
T 3h14_A 248 QVRVVE 253 (391)
T ss_dssp GHHHHH
T ss_pred HHHHHH
Confidence 776654
No 32
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=99.89 E-value=1.3e-22 Score=180.64 Aligned_cols=205 Identities=13% Similarity=0.100 Sum_probs=146.6
Q ss_pred CceecCCCCCCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-HHH
Q 023191 48 GLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNF 126 (286)
Q Consensus 48 ~i~L~~~e~~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~ 126 (286)
.+++++|...+++++++++.+.+.+. ++. + ......+ +++++++++|.+.+. .++++++|++ ++.
T Consensus 5 ~~~~~~gp~~~~~~v~~a~~~~~~~~----~~~---~-~~~~~~~----l~~~la~~~g~~~~~--~~v~~~~g~t~a~~ 70 (366)
T 1m32_A 5 YLLLTPGPLTTSRTVKEAMLFDSCTW----DDD---Y-NIGVVEQ----IRQQLTALATASEGY--TSVLLQGSGSYAVE 70 (366)
T ss_dssp CEECSSSSCCCCHHHHHTTCCCCCTT----SHH---H-HTTTHHH----HHHHHHHHHCSSSSE--EEEEEESCHHHHHH
T ss_pred cccccCCCcCCCHHHHHHHhhhhcCC----CHH---H-HHHHHHH----HHHHHHHHhCCCCcC--cEEEEecChHHHHH
Confidence 57888886678999999998754210 000 0 0023334 557777888832111 2599999988 888
Q ss_pred HHHHHhcCCCCeEEecc-CCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhc-CCcEEEEc-C
Q 023191 127 QVYTALLKPHDRIMALD-LPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF-RPKLIVAG-A 203 (286)
Q Consensus 127 ~~l~a~~~~Gd~Vl~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~-~tk~v~i~-~ 203 (286)
+++.+++++||+|++++ +.|++. +...+...|.+++.++ .+ +++.+|++++++++++. ++++|+++ +
T Consensus 71 ~~~~~~~~~gd~vi~~~~~~~~~~-------~~~~~~~~g~~~~~v~--~~-~~~~~d~~~l~~~l~~~~~~~~v~~~~~ 140 (366)
T 1m32_A 71 AVLGSALGPQDKVLIVSNGAYGAR-------MVEMAGLMGIAHHAYD--CG-EVARPDVQAIDAILNADPTISHIAMVHS 140 (366)
T ss_dssp HHHHHSCCTTCCEEEEESSHHHHH-------HHHHHHHHTCCEEEEE--CC-TTSCCCHHHHHHHHHHCTTCCEEEEESE
T ss_pred HHHHHhcCCCCeEEEEeCCCccHH-------HHHHHHHhCCceEEEe--CC-CCCCCCHHHHHHHHhcCCCeEEEEEecc
Confidence 89999999999998776 333321 1112334565566565 34 45779999999999873 57888776 5
Q ss_pred CC-CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCCcceEEEeCCCCCCCCCCc-eEEEEecchhhhhc
Q 023191 204 SA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEINK 279 (286)
Q Consensus 204 ~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~g-G~l~~~~~~~~~~~ 279 (286)
+| +|...|+++|.++|++||+++|+|++|+.|....++... ++|++++|+||+++||.| |++++++++.+..+
T Consensus 141 ~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~---~~di~~~s~~K~~~~~~g~G~~~~~~~~~~~~~ 215 (366)
T 1m32_A 141 ETTTGMLNPIDEVGALAHRYGKTYIVDAMSSFGGIPMDIAAL---HIDYLISSANKCIQGVPGFAFVIAREQKLAACK 215 (366)
T ss_dssp ETTTTEECCHHHHHHHHHHHTCEEEEECTTTTTTSCCCTTTT---TCSEEEEESSSTTCCCSSEEEEEEEHHHHTTCT
T ss_pred cCCcceecCHHHHHHHHHHcCCEEEEECCccccCcCcccccc---CccEEEecCcccccCCCceEEEEECHHHHHhhc
Confidence 55 688889999999999999999999999877654443222 389999999999988888 99999988765544
No 33
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=99.89 E-value=1.5e-22 Score=183.10 Aligned_cols=214 Identities=13% Similarity=0.098 Sum_probs=154.9
Q ss_pred HcCceecCCCC--CCCHHHHHHhccccccCCCCCCCC-CcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCCh
Q 023191 46 WKGLELIPSEN--FTSVSVMQAVGSVMTNKYSEGYPG-ARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS 122 (286)
Q Consensus 46 ~~~i~L~~~e~--~~~~~v~~a~~~~l~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~ 122 (286)
.+.|+|..+.+ ++++.+++++.+.+.+.. +. ...|+...+..++++++.+++.+.+|.+.+. .+|++|+|+
T Consensus 35 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~----~~~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~--~~i~~~~g~ 108 (398)
T 3ele_A 35 ENVYDFSIGNPSIPAPQIVNDTIKELVTDYD----SVALHGYTSAQGDVETRAAIAEFLNNTHGTHFNA--DNLYMTMGA 108 (398)
T ss_dssp GGCEECCSCCCCSCCCHHHHHHHHHHHHHSC----HHHHHSCCCTTCCHHHHHHHHHHHHHHHCCCCCG--GGEEEESSH
T ss_pred CCeEEeecCCCCCCCCHHHHHHHHHHHhcCC----ccccCCcCCCCCcHHHHHHHHHHHHHHhCCCCCh--HHEEEccCH
Confidence 36789988866 368899999988775421 00 1123344566789999999999998863322 369999999
Q ss_pred H-HHHHHHHHhcCCC-CeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEE
Q 023191 123 P-SNFQVYTALLKPH-DRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIV 200 (286)
Q Consensus 123 ~-a~~~~l~a~~~~G-d~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~ 200 (286)
+ ++..++.+++++| |+|+++++.|.++. ..+...|.+++.+| .+.+++.+|++++++++++ ++++|+
T Consensus 109 ~~al~~~~~~l~~~g~d~vl~~~p~~~~~~--------~~~~~~g~~~~~v~--~~~~~~~~d~~~l~~~l~~-~~~~v~ 177 (398)
T 3ele_A 109 AASLSICFRALTSDAYDEFITIAPYFPEYK--------VFVNAAGARLVEVP--ADTEHFQIDFDALEERINA-HTRGVI 177 (398)
T ss_dssp HHHHHHHHHHHCCSTTCEEEEESSCCTHHH--------HHHHHTTCEEEEEC--CCTTTSSCCHHHHHHTCCT-TEEEEE
T ss_pred HHHHHHHHHHHcCCCCCEEEEeCCCchhhH--------HHHHHcCCEEEEEe--cCCcCCcCCHHHHHHHhCc-CCCEEE
Confidence 9 8888999999999 99999996655543 24455676665555 4545679999999999987 899999
Q ss_pred Ec-CCC-CCCccC---HHHHHHHHHh------cCCEEEEeccccccccccCCCCCC--CCcceEEEeCCCCCCC--CCCc
Q 023191 201 AG-ASA-YARLYD---YERIRKVCNK------QKAIMLADMAHISGLVAAGVIPSP--FEYADVVTTTTHKSLR--GPRG 265 (286)
Q Consensus 201 i~-~~n-~g~~~~---l~~I~~ia~~------~~~~vivD~a~~~g~~~~~~~~~~--~~~~D~v~~s~~K~l~--gp~g 265 (286)
++ ++| +|...+ +++|+++|++ ||+++|+|++|+.........+.. ....++++.|++|+|+ |.+.
T Consensus 178 ~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~ 257 (398)
T 3ele_A 178 INSPNNPSGTVYSEETIKKLSDLLEKKSKEIGRPIFIIADEPYREIVYDGIKVPFVTKYYDNTLVCYSYSKSLSLPGERI 257 (398)
T ss_dssp ECSSCTTTCCCCCHHHHHHHHHHHHHHHHHHTSCCEEEEECTTTTCBCTTCCCCCGGGTCSSEEEEEESTTTSSCTTTCC
T ss_pred EcCCCCCCCCCCCHHHHHHHHHHHHhhhhccCCCeEEEEeccccccccCCCCcCChHhhcCCeEEEEehhhcCCCcccee
Confidence 97 666 677666 6777899999 999999999987533321111111 1136688999999884 4445
Q ss_pred eEEEEecchhh
Q 023191 266 AMIFFRKGVKE 276 (286)
Q Consensus 266 G~l~~~~~~~~ 276 (286)
|++++++++.+
T Consensus 258 G~~~~~~~~~~ 268 (398)
T 3ele_A 258 GYVLVPDEVYD 268 (398)
T ss_dssp EEEECCTTSTT
T ss_pred EEEEEcchhhh
Confidence 99999987543
No 34
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=99.89 E-value=5.9e-23 Score=186.75 Aligned_cols=237 Identities=10% Similarity=0.051 Sum_probs=168.6
Q ss_pred cccccccChHHHHHHHHHHHHHHcCceecCCCCC--CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHH
Q 023191 24 NAPLEVVDPEIADIIEHEKARQWKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRA 101 (286)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~i~L~~~e~~--~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 101 (286)
++++..+++..+..+.+.. ...+.++|..+++. +++.+++++.+.+.+. ..+ |+...+..++++++.+++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~-~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~-~~~------y~~~~g~~~l~~~la~~~ 75 (411)
T 2o0r_A 4 VSRLRPYATTVFAEMSALA-TRIGAVNLGQGFPDEDGPPKMLQAAQDAIAGG-VNQ------YPPGPGSAPLRRAIAAQR 75 (411)
T ss_dssp CGGGGGGSSCHHHHHHHHH-HTTTCEESSCSSCSSCCCHHHHHHHHHHHHTT-CCS------CCCTTCCHHHHHHHHHHH
T ss_pred hhHhHhcCccHHHHHHHHh-hcCCeeeccCcCCCCCCCHHHHHHHHHHHhcC-CCC------CCCCCCCHHHHHHHHHHH
Confidence 4556667777777766543 34467899888763 5789999998887542 112 233345678999999999
Q ss_pred HHHCCCCCCCcce-eEEeCCChH-HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCC
Q 023191 102 LEAFRLDPEKWGV-NVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNEST 179 (286)
Q Consensus 102 ~~~~g~~~~~~~~-~v~~~sG~~-a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~ 179 (286)
.+.+|++.+. . +|++|+|++ ++.+++.+++++||+|+++++.|.++.. .+...|.+++.++++.+..+
T Consensus 76 ~~~~g~~~~~--~~~v~~t~g~~~al~~~~~~~~~~gd~Vl~~~~~y~~~~~--------~~~~~g~~~~~v~~~~~~~~ 145 (411)
T 2o0r_A 76 RRHFGVDYDP--ETEVLVTVGATEAIAAAVLGLVEPGSEVLLIEPFYDSYSP--------VVAMAGAHRVTVPLVPDGRG 145 (411)
T ss_dssp HHHHCCCCCT--TTSEEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHH--------HHHHTTCEEEEEECEEETTE
T ss_pred HHHcCCCCCC--CceEEEeCCHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHH--------HHHHcCCEEEEeeccccccC
Confidence 8888864221 2 499999988 8888899999999999999977766532 33456666665654321114
Q ss_pred CCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccC---HHHHHHHHHhcCCEEEEeccccccccccCCCCC--CC---Ccc
Q 023191 180 GYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVIPS--PF---EYA 249 (286)
Q Consensus 180 ~~~d~e~l~~~i~~~~tk~v~i~-~~n-~g~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~--~~---~~~ 249 (286)
+.+|+++|++.+++ ++++|+++ ++| +|...+ +++|+++|++||+++|+|++|+.+......... .+ .+.
T Consensus 146 ~~~d~~~l~~~l~~-~~~~v~l~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~ 224 (411)
T 2o0r_A 146 FALDADALRRAVTP-RTRALIINSPHNPTGAVLSATELAAIAEIAVAANLVVITDEVYEHLVFDHARHLPLAGFDGMAER 224 (411)
T ss_dssp EECCHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGG
T ss_pred CCCCHHHHHHhhcc-CceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcChhhccCCCCC
Confidence 67999999999987 89999987 666 676655 589999999999999999998765432111110 11 247
Q ss_pred eEEEeCCCCCCC--CCCceEEEEecchhhhhc
Q 023191 250 DVVTTTTHKSLR--GPRGAMIFFRKGVKEINK 279 (286)
Q Consensus 250 D~v~~s~~K~l~--gp~gG~l~~~~~~~~~~~ 279 (286)
|+++.|+||+|+ |.+.|++++++++.+..+
T Consensus 225 ~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~ 256 (411)
T 2o0r_A 225 TITISSAAKMFNCTGWKIGWACGPAELIAGVR 256 (411)
T ss_dssp EEEEEEHHHHTTCTTTCEEEEECCHHHHHHHH
T ss_pred EEEEeechhhcCCccceEEEEeeCHHHHHHHH
Confidence 999999999885 334699999887766544
No 35
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=99.89 E-value=2.7e-23 Score=186.45 Aligned_cols=198 Identities=17% Similarity=0.200 Sum_probs=146.0
Q ss_pred CCCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-HHHHHHHHhc-
Q 023191 56 NFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALL- 133 (286)
Q Consensus 56 ~~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l~a~~- 133 (286)
.++++.+++++.+.+.+.+ +++.. .|..........+++++++++++|++++ +|++|+|++ ++.+++.++.
T Consensus 10 ~~~~~~v~~a~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~l~~~la~~~g~~~~----~v~~~~g~t~a~~~~~~~l~~ 82 (382)
T 4eb5_A 10 KPVDERILEAMLPYMTESF--GNPSS-VHSYGFKAREAVQEAREKVAKLVNGGGG----TVVFTSGATEANNLAIIGYAM 82 (382)
T ss_dssp CCCCHHHHHHHHHHHHTSC--CCTTC-SSHHHHHHHHHHHHHHHHHHHHHTCTTE----EEEEESSHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhcc--CCCCC-CcHHHHHHHHHHHHHHHHHHHHhCCCCC----eEEEcCchHHHHHHHHHHHHh
Confidence 3679999999998886533 22221 1221223345666788999999998763 599999988 8887888887
Q ss_pred ---CCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCC
Q 023191 134 ---KPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YAR 208 (286)
Q Consensus 134 ---~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~-~~n-~g~ 208 (286)
++||+|+++++.|+++...... ....|..++.++ .+ +++.+|+++|++.+++ ++++|+++ ++| +|.
T Consensus 83 ~~~~~gd~Vl~~~~~~~~~~~~~~~-----~~~~g~~~~~v~--~~-~~~~~d~~~l~~~i~~-~~~~v~~~~~~nptG~ 153 (382)
T 4eb5_A 83 RNARKGKHILVSAVEHMSVINPAKF-----LQKQGFEVEYIP--VG-KYGEVDVSFIDQKLRD-DTILVSVQHANNEIGT 153 (382)
T ss_dssp HHGGGCCEEEEETTCCHHHHHHHHH-----HTTTTCEEEEEC--BC-TTSCBCHHHHHHHCCT-TEEEEECCSBCTTTCB
T ss_pred hccCCCCEEEECCCcchHHHHHHHH-----HHhCCcEEEEec--cC-CCCccCHHHHHHHhcC-CCeEEEEeccCCCccc
Confidence 8999999999887766432211 112455555555 44 4678999999999987 89998887 555 778
Q ss_pred ccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCCcceEEEeCCCCCCCCCCc-eEEEEecch
Q 023191 209 LYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGV 274 (286)
Q Consensus 209 ~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~g-G~l~~~~~~ 274 (286)
..|+++|.++|++||++ |+|++|+.|....++... ++|++++|+||+ .||.| |+++++++.
T Consensus 154 ~~~l~~i~~l~~~~~~~-i~D~a~~~g~~~~~~~~~---~~di~~~s~sK~-~g~~g~G~~~~~~~~ 215 (382)
T 4eb5_A 154 IQPVEEISEVLAGKAAL-HIDATASVGQIEVDVEKI---GADMLTISSNDI-YGPKGVGALWIRKEA 215 (382)
T ss_dssp BCCHHHHHHHHTTSSEE-EEECTTTBTTBCCCHHHH---TCSEEEEETGGG-TCCSSCEEEEEETTC
T ss_pred cCCHHHHHHHHHHCCCE-EEEcchhcCCcccCcccc---CCCEEEeehHHh-cCCCceEEEEEcccc
Confidence 89999999999999999 999999876543222111 389999999997 57777 999998763
No 36
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=99.89 E-value=7.8e-23 Score=186.89 Aligned_cols=252 Identities=13% Similarity=0.092 Sum_probs=169.0
Q ss_pred CCCCCcchhhhhcccCCCchhhccccccccChHHHHHHHHHHHHHHcCceecCCCCC--CCHHHHHHhccccccCCCCCC
Q 023191 1 MSSLPNEAVYEKEKNGVTWPKQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGY 78 (286)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~L~~~e~~--~~~~v~~a~~~~l~~~~~~~~ 78 (286)
|+++.|..- ++. -.+++++...++.++..+.+.. ...+.|+|..+++. +++.+++++.+.+....
T Consensus 1 ~~~~~~~~~-~~~-------~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~---- 67 (429)
T 1yiz_A 1 MSSTSNETM-HNK-------FDLPKRYQGSTKSVWVEYIQLA-AQYKPLNLGQGFPDYHAPKYALNALAAAANSPD---- 67 (429)
T ss_dssp ------------C-------CCSSSSCCCCTTCHHHHHHHHH-HHHCCEECCSSSCSSCCCHHHHHHHHHHHTCSC----
T ss_pred CCCCccchh-ccc-------cchhHHhhhCCchHHHHHHHHh-ccCCEEEecCCCCCCCCCHHHHHHHHHHHhccc----
Confidence 666666544 221 1134566667777777666543 34578999888763 68999999988775410
Q ss_pred CCCcccCCcchHHHHHHHHHHHHHHHCCC--CCCCcceeEEeCCChH-HHHHHHHHhcCCCCeEEeccCCCCcccCcccc
Q 023191 79 PGARYYGGNEYIDMAESLCQKRALEAFRL--DPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQ 155 (286)
Q Consensus 79 ~~~~~~~~~~~~~~l~~~~~~~~~~~~g~--~~~~~~~~v~~~sG~~-a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~ 155 (286)
.....|+...+..++++++.+++.+.+|. +++. +|++++|++ ++.+++.+++++||+|+++.+.|.++.
T Consensus 68 ~~~~~y~~~~g~~~l~~~la~~l~~~~g~~~~~~~---~v~~~~g~~~a~~~~~~~~~~~gd~Vl~~~p~y~~~~----- 139 (429)
T 1yiz_A 68 PLANQYTRGFGHPRLVQALSKLYSQLVDRTINPMT---EVLVTVGAYEALYATIQGHVDEGDEVIIIEPFFDCYE----- 139 (429)
T ss_dssp GGGGSCCCSSCCHHHHHHHHHHHHHHHTSCCCTTT---SEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHH-----
T ss_pred cCccCCCCCCCcHHHHHHHHHHHHHHhCCCCCCcC---CEEEecChHHHHHHHHHHhcCCCCEEEEcCCCchhHH-----
Confidence 01112344455678999999999888885 4430 499999988 888899999999999999996665543
Q ss_pred ccccccccceeeeEEEecccCCC---------CCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccC---HHHHHHHHHh
Q 023191 156 TDTKKISAVSIFFETMPYRLNES---------TGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYD---YERIRKVCNK 221 (286)
Q Consensus 156 ~~~~~~~~~g~~~~~v~~~~~~~---------~~~~d~e~l~~~i~~~~tk~v~i~-~~n-~g~~~~---l~~I~~ia~~ 221 (286)
..+...|..++.+++ +.+ ++.+|+++|++.+++ ++++|+++ ++| +|...+ +++|+++|++
T Consensus 140 ---~~~~~~g~~~~~~~~--~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~ 213 (429)
T 1yiz_A 140 ---PMVKAAGGIPRFIPL--KPNKTGGTISSADWVLDNNELEALFNE-KTKMIIINTPHNPLGKVMDRAELEVVANLCKK 213 (429)
T ss_dssp ---HHHHHTTCEEEEEEC--BCCCSSSSEEGGGCBCCHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHH
T ss_pred ---HHHHHcCCEEEEEeC--CcccccccccccCcccCHHHHHHHhcc-CceEEEECCCCCCCCccCCHHHHHHHHHHHHH
Confidence 234456666655654 322 467999999999976 89999887 666 676664 8999999999
Q ss_pred cCCEEEEeccccccccccC----CCCCC-CCcceEEEeCCCCCCCCC--CceEEEEecchhhhhc
Q 023191 222 QKAIMLADMAHISGLVAAG----VIPSP-FEYADVVTTTTHKSLRGP--RGAMIFFRKGVKEINK 279 (286)
Q Consensus 222 ~~~~vivD~a~~~g~~~~~----~~~~~-~~~~D~v~~s~~K~l~gp--~gG~l~~~~~~~~~~~ 279 (286)
||+++|+|++|+....... +.... ..+.|+++.|+||+|+.| +.|++++++++.+..+
T Consensus 214 ~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~ 278 (429)
T 1yiz_A 214 WNVLCVSDEVYEHMVFEPFEHIRICTLPGMWERTITIGSAGKTFSLTGWKIGWAYGPEALLKNLQ 278 (429)
T ss_dssp HTCEEEEECTTTTCBCTTSCCCCGGGSTTTGGGEEEEEEHHHHHTCGGGCCEEEESCHHHHHHHH
T ss_pred cCcEEEEeccccccccCCCCCcChhhccCCcCceEEEecchhccCCCCcceEEEEeCHHHHHHHH
Confidence 9999999999875332111 11111 124789999999988533 3599999988766554
No 37
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=99.89 E-value=1.3e-22 Score=181.82 Aligned_cols=205 Identities=13% Similarity=0.038 Sum_probs=151.7
Q ss_pred cCceecCCCCC--CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-
Q 023191 47 KGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP- 123 (286)
Q Consensus 47 ~~i~L~~~e~~--~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~- 123 (286)
+.++|..+++. +++.+++++.+.+.... .+ |+...+..++++++.+++.+.+|++.+. .+|++|+|++
T Consensus 30 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~-~~------y~~~~~~~~l~~~la~~~~~~~g~~~~~--~~v~~~~g~~~ 100 (370)
T 2z61_A 30 KVIHLEIGEPDFNTPKPIVDEGIKSLKEGK-TH------YTDSRGILELREKISELYKDKYKADIIP--DNIIITGGSSL 100 (370)
T ss_dssp CCEECCCCSCSSCCCHHHHHHHHHHHHTTC-CS------CCCTTCCHHHHHHHHHHHHHHSSCCCCG--GGEEEESSHHH
T ss_pred CEEEccCCCCCCCCCHHHHHHHHHHHHcCc-cC------CCCCCCCHHHHHHHHHHHHHHhCCCCCh--hhEEECCChHH
Confidence 57899888773 57899999988775421 12 3333556789999999998888854332 3599999999
Q ss_pred HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-
Q 023191 124 SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG- 202 (286)
Q Consensus 124 a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~- 202 (286)
++.+++.+++++||+|+++++.|.++.. .+...|..++.++ +|++++++.+++ ++++|+++
T Consensus 101 a~~~~~~~~~~~gd~vl~~~p~~~~~~~--------~~~~~g~~~~~v~---------~d~~~l~~~l~~-~~~~v~~~~ 162 (370)
T 2z61_A 101 GLFFALSSIIDDGDEVLIQNPCYPCYKN--------FIRFLGAKPVFCD---------FTVESLEEALSD-KTKAIIINS 162 (370)
T ss_dssp HHHHHHHHHCCTTCEEEEESSCCTHHHH--------HHHHTTCEEEEEC---------SSHHHHHHHCCS-SEEEEEEES
T ss_pred HHHHHHHHhcCCCCEEEEeCCCchhHHH--------HHHHcCCEEEEeC---------CCHHHHHHhccc-CceEEEEcC
Confidence 8888999999999999999977665532 3445565444443 689999999987 88998887
Q ss_pred CCC-CCCccCHHHHHHHHHhcCCEEEEeccccccccccC---CCCC-CCCcceEEEeCCCCCCCCC--CceEEEEecchh
Q 023191 203 ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAG---VIPS-PFEYADVVTTTTHKSLRGP--RGAMIFFRKGVK 275 (286)
Q Consensus 203 ~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~---~~~~-~~~~~D~v~~s~~K~l~gp--~gG~l~~~~~~~ 275 (286)
++| +|...+.+ |.++|++||+++|+|++|+.+..... .... ...+.|+++.|+||+++.| +.|++++++++.
T Consensus 163 p~nptG~~~~~~-l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~ 241 (370)
T 2z61_A 163 PSNPLGEVIDRE-IYEFAYENIPYIISDEIYNGLVYEGKCYSAIEFDENLEKTILINGFSKLYAMTGWRIGYVISNDEII 241 (370)
T ss_dssp SCTTTCCCCCHH-HHHHHHHHCSEEEEECTTTTCBSSSCCCCGGGTCTTCSSEEEEEESTTTTTCGGGCCEEEECCHHHH
T ss_pred CCCCcCcccCHH-HHHHHHHcCCEEEEEcchhhcccCCCCcCHHHccCCCCcEEEEecChhccCCccceEEEEEECHHHH
Confidence 666 77888999 99999999999999999886544211 1111 0124789999999998533 359999998876
Q ss_pred hhhc
Q 023191 276 EINK 279 (286)
Q Consensus 276 ~~~~ 279 (286)
+..+
T Consensus 242 ~~~~ 245 (370)
T 2z61_A 242 EAIL 245 (370)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6544
No 38
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.89 E-value=2.2e-22 Score=180.61 Aligned_cols=203 Identities=10% Similarity=0.045 Sum_probs=144.7
Q ss_pred cCceecCCCCCCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCC----CCCCcceeEEeCCCh
Q 023191 47 KGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRL----DPEKWGVNVQSLSGS 122 (286)
Q Consensus 47 ~~i~L~~~e~~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~----~~~~~~~~v~~~sG~ 122 (286)
+.+.+.++...+++.+++++.+.+...+ + .........++++++++++. ++ .+|++++|+
T Consensus 5 ~~~~~~p~p~~~~~~v~~a~~~~~~~~~---~---------~~~~~~~~~~~~~l~~~~~~~~~~~~----~~v~~~~g~ 68 (385)
T 2bkw_A 5 VDTLLIPGPIILSGAVQKALDVPSLGHT---S---------PEFVSIFQRVLKNTRAVFKSAAASKS----QPFVLAGSG 68 (385)
T ss_dssp CCEECSSSSCCCCHHHHHTTSCCCCCTT---S---------HHHHHHHHHHHHHHHHHTTCCGGGTC----EEEEEESCT
T ss_pred cceeecCCCcCchHHHHHHHhccccccC---C---------HHHHHHHHHHHHHHHHHhCCCCCCCC----ceEEEcCch
Confidence 4577888887889999999987654311 1 11112233345566666654 33 358888888
Q ss_pred H-HHHHHHHHhc---CCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcE
Q 023191 123 P-SNFQVYTALL---KPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKL 198 (286)
Q Consensus 123 ~-a~~~~l~a~~---~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~ 198 (286)
+ ++.+++.++. ++||+|++++..+.... ....+...|.+++.+++. + +++.+|+++|++++++.++++
T Consensus 69 t~al~~~~~~~~~~~~~gd~vlv~~~~~~~~~------~~~~~~~~g~~~~~v~~~-~-~~~~~d~~~l~~~l~~~~~~~ 140 (385)
T 2bkw_A 69 TLGWDIFASNFILSKAPNKNVLVVSTGTFSDR------FADCLRSYGAQVDVVRPL-K-IGESVPLELITEKLSQNSYGA 140 (385)
T ss_dssp THHHHHHHHHHSCTTCSCCEEEEECSSHHHHH------HHHHHHHTTCEEEEECCS-S-TTSCCCHHHHHHHHHHSCCSE
T ss_pred HHHHHHHHHHHhccCCCCCeEEEEcCCcchHH------HHHHHHHcCCceEEEecC-C-CCCCCCHHHHHHHHhcCCCCE
Confidence 8 8887888887 99999988853211110 011234456656555531 4 567899999999997657999
Q ss_pred EEEc-CCC-CCCccCHHHHHHHHHhc--CCEEEEeccccccccccCCCCCCCCcceEEEeCCCCCCCCCCc-eEEEEecc
Q 023191 199 IVAG-ASA-YARLYDYERIRKVCNKQ--KAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKG 273 (286)
Q Consensus 199 v~i~-~~n-~g~~~~l~~I~~ia~~~--~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~g-G~l~~~~~ 273 (286)
|+++ ++| +|...|+++|.++|++| |+++|+|++|+.|....++... ++|++++|+||+++||.| |+++++++
T Consensus 141 v~~~~~~nptG~~~~l~~i~~~~~~~~~~~~li~D~a~~~~~~~~~~~~~---~~d~~~~s~~K~~~~~~G~G~~~~~~~ 217 (385)
T 2bkw_A 141 VTVTHVDTSTAVLSDLKAISQAIKQTSPETFFVVDAVCSIGCEEFEFDEW---GVDFALTASQKAIGAPAGLSISLCSSR 217 (385)
T ss_dssp EEEESEETTTTEECCHHHHHHHHHHHCTTSEEEEECTTTTTTSCCCTTTT---TCSEEEEESSSTTCCCSCEEEEEECHH
T ss_pred EEEEccCCCcCeEcCHHHHHHHHHhhCCCCEEEEECccccCCcccccccc---CceEEEecCccccccCCcceEEEEcHH
Confidence 9987 555 67888999999999999 9999999999877654433322 389999999999999888 99999887
Q ss_pred hhh
Q 023191 274 VKE 276 (286)
Q Consensus 274 ~~~ 276 (286)
+.+
T Consensus 218 ~~~ 220 (385)
T 2bkw_A 218 FMD 220 (385)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
No 39
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=99.89 E-value=3.4e-23 Score=186.30 Aligned_cols=216 Identities=15% Similarity=0.125 Sum_probs=155.9
Q ss_pred cCceecCCCC-CCCHHHHHHhccccccCCCCCCCCC-cccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-
Q 023191 47 KGLELIPSEN-FTSVSVMQAVGSVMTNKYSEGYPGA-RYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP- 123 (286)
Q Consensus 47 ~~i~L~~~e~-~~~~~v~~a~~~~l~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~- 123 (286)
+.+.|+.+.. ++|+.+++++.+.+..... ..+.. ..|. ........+++.+++++|++++ +|++++|++
T Consensus 16 ~~i~l~~~~~~~~~~~v~~a~~~~~~~~~~-~~~~~~~~y~---~~~~~~~~l~~~la~~~g~~~~----~v~~~~g~t~ 87 (390)
T 1elu_A 16 NKTYFNFGGQGILPTVALEAITAMYGYLQE-NGPFSIAANQ---HIQQLIAQLRQALAETFNVDPN----TITITDNVTT 87 (390)
T ss_dssp TSEECCTTTCCCCCHHHHHHHHHHHHHHHH-HCSSSHHHHH---HHHHHHHHHHHHHHHHTTSCGG----GEEEESSHHH
T ss_pred CeEEecCCccCCCCHHHHHHHHHHHHHHhc-cCCcchhhHH---HHHHHHHHHHHHHHHHcCCCHH----HEEEeCChHH
Confidence 3567765554 4678899999887754210 00000 0111 1113445577888999998764 499999988
Q ss_pred HHHHHHHHh-cCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc
Q 023191 124 SNFQVYTAL-LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG 202 (286)
Q Consensus 124 a~~~~l~a~-~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~ 202 (286)
++.+++.++ +++||+|+++++.|.++..+... .+...|.+++.++++.. +++.+|++++++.+++ ++++|+++
T Consensus 88 a~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~----~~~~~g~~~~~v~~~~~-~~~~~d~~~l~~~i~~-~~~~v~~~ 161 (390)
T 1elu_A 88 GCDIVLWGLDWHQGDEILLTDCEHPGIIAIVQA----IAARFGITYRFFPVAAT-LNQGDAAAVLANHLGP-KTRLVILS 161 (390)
T ss_dssp HHHHHHHHSCCCTTCEEEEETTCCHHHHHHHHH----HHHHHCCEEEEECCGGG-SSSSCHHHHHHTTCCT-TEEEEEEE
T ss_pred HHHHHHhCCCCCCCCEEEEecCcccHHHHHHHH----HHHHhCcEEEEEcCCCC-CCccchHHHHHHhcCC-CceEEEEe
Confidence 888889999 89999999999777765432110 12234655655654321 3578999999999987 89999987
Q ss_pred -CCC-CCCccCHHHHHHHHH----hcCCEEEEeccccccccccCCCCCCCCcceEEEeCCCCCCCCCCc-eEEEEecchh
Q 023191 203 -ASA-YARLYDYERIRKVCN----KQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVK 275 (286)
Q Consensus 203 -~~n-~g~~~~l~~I~~ia~----~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~g-G~l~~~~~~~ 275 (286)
++| +|...|+++|.++|+ +||+++|+|++|+.|....++... +.|++++|+|||+.||.| |++++++++.
T Consensus 162 ~~~nptG~~~~~~~i~~l~~~~~~~~~~~li~Dea~~~g~~~~~~~~~---~~d~~~~s~~K~~~~~~g~G~~~~~~~~~ 238 (390)
T 1elu_A 162 HLLWNTGQVLPLAEIMAVCRRHQGNYPVRVLVDGAQSAGSLPLDFSRL---EVDYYAFTGHKWFAGPAGVGGLYIHGDCL 238 (390)
T ss_dssp SBCTTTCCBCCHHHHHHHHHHCCSSSCCEEEEECTTTBTTBCCCTTTS---CCSEEEEESSSTTCCCTTCEEEEECTTTG
T ss_pred ccccCCceecCHHHHHHHHhhhhhhcCcEEEEEcccccCCcCCChhhc---CCCEEEccccccccCCCceEEEEECHHhH
Confidence 556 778899999999999 999999999999987665443322 389999999998888888 9999999877
Q ss_pred hhhc
Q 023191 276 EINK 279 (286)
Q Consensus 276 ~~~~ 279 (286)
+..+
T Consensus 239 ~~~~ 242 (390)
T 1elu_A 239 GEIN 242 (390)
T ss_dssp GGCC
T ss_pred hhcC
Confidence 6554
No 40
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=99.89 E-value=1.4e-22 Score=184.34 Aligned_cols=237 Identities=15% Similarity=0.152 Sum_probs=155.6
Q ss_pred ccccccccChHHHHHHHHHHHH----HHcCceecCCCCC--CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHH
Q 023191 23 LNAPLEVVDPEIADIIEHEKAR----QWKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESL 96 (286)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~----~~~~i~L~~~e~~--~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~ 96 (286)
+++++..+.++.+..+.+...+ ..+.++|..+++. +++.+++++.+.+..... ..|+...+..+++++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~idl~~g~~~~~~~~~v~~a~~~~~~~~~~------~~y~~~~g~~~l~~~ 83 (412)
T 2x5d_A 10 RFARIDRLPPYVFNITAELKMAARRRGEDIIDLSMGNPDGPTPPHIVEKLCTVAQREDT------HGYSTSRGIPRLRRA 83 (412)
T ss_dssp -----------CHHHHHHHHHHHHHTTCCCEECSSCCCCSCCCHHHHHHHHHTC---------------CTTCCHHHHHH
T ss_pred hhHHHhhcCchHHHHHHHHHHHHhhcCCCEEecCCCCCCCCCCHHHHHHHHHHHhCCCC------CCCCCCCCcHHHHHH
Confidence 3444555555555554443321 1256899888774 589999999887754211 123334566789988
Q ss_pred HHHHHHHHCCC--CCCCcceeEEeCCChH-HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEec
Q 023191 97 CQKRALEAFRL--DPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPY 173 (286)
Q Consensus 97 ~~~~~~~~~g~--~~~~~~~~v~~~sG~~-a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~ 173 (286)
+.+++.+.+|+ ++++ +|++|+|++ ++.+++.+++++||+|+++++.|.++.. .+...|.+++.++
T Consensus 84 ia~~~~~~~g~~~~~~~---~v~~t~g~~~a~~~~~~~~~~~gd~Vl~~~p~~~~~~~--------~~~~~g~~~~~~~- 151 (412)
T 2x5d_A 84 ISHWYRDRYDVQIDPES---EAIVTIGSKEGLAHLMLATLDHGDTILVPNPSYPIHIY--------GAVIAGAQVRSVP- 151 (412)
T ss_dssp HHHHHHHHHCCCCCTTT---SEEEESCHHHHHHHHHHHHCCTTCEEEEEESCCHHHHH--------HHHHHTCEEEEEE-
T ss_pred HHHHHHHHhCCCCCCCc---CEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHH--------HHHHcCCEEEEee-
Confidence 88888888786 3312 499999999 8888999999999999999966655432 3445666565555
Q ss_pred ccCCC-CCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccC---HHHHHHHHHhcCCEEEEeccccccccccCCCC--CC
Q 023191 174 RLNES-TGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVIP--SP 245 (286)
Q Consensus 174 ~~~~~-~~~~d~e~l~~~i~~~~tk~v~i~-~~n-~g~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~--~~ 245 (286)
.+.+ ++.+|++++++.+++ ++++|+++ ++| +|...+ +++|+++|++||+++|+|++|+.+........ ..
T Consensus 152 -~~~~~~~~~d~~~l~~~i~~-~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~ 229 (412)
T 2x5d_A 152 -LVPGIDFFNELERAIRESIP-KPRMMILGFPSNPTAQCVELDFFERVVALAKQYDVMVVHDLAYADIVYDGWKAPSIMQ 229 (412)
T ss_dssp -CSTTSCHHHHHHHHHHTEES-CCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGG
T ss_pred -cCCccCCCCCHHHHHHhccc-CceEEEECCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCChhh
Confidence 4433 445899999999886 89999996 766 676655 68899999999999999999886543211100 11
Q ss_pred C---CcceEEEeCCCCCCC--CCCceEEEEecchhhhhc
Q 023191 246 F---EYADVVTTTTHKSLR--GPRGAMIFFRKGVKEINK 279 (286)
Q Consensus 246 ~---~~~D~v~~s~~K~l~--gp~gG~l~~~~~~~~~~~ 279 (286)
+ .+.|+++.|+||+|+ |.+.|++++++++.+..+
T Consensus 230 ~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~ 268 (412)
T 2x5d_A 230 VPGAKDIAVEFFTLSKSYNMAGWRIGFMVGNPELVSALA 268 (412)
T ss_dssp STTGGGTEEEEEECC-CCSCTTSCCEEEEECHHHHHHHH
T ss_pred ccCccCcEEEEecCccccCCcccceEEEEcCHHHHHHHH
Confidence 1 147899999999985 445599999887766554
No 41
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=99.89 E-value=3.3e-22 Score=179.81 Aligned_cols=201 Identities=13% Similarity=0.083 Sum_probs=150.4
Q ss_pred ecCCCCCCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-HHHHHH
Q 023191 51 LIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVY 129 (286)
Q Consensus 51 L~~~e~~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l 129 (286)
|.....++++.+.+++.+.+...+ +++ ....+..++++++++++++++|++++ +|++++|++ ++.+++
T Consensus 35 ~~~~~~~~~~~v~~a~~~~~~~~~--~~~-----~~~~~~~~~~~~l~~~la~~~~~~~~----~i~~~~ggt~a~~~~~ 103 (397)
T 3f9t_A 35 FGSMCSNVLPITRKIVDIFLETNL--GDP-----GLFKGTKLLEEKAVALLGSLLNNKDA----YGHIVSGGTEANLMAL 103 (397)
T ss_dssp CSCSCCCCCTHHHHHHHHHTTCCT--TSG-----GGBHHHHHHHHHHHHHHHHHTTCTTC----EEEEESCHHHHHHHHH
T ss_pred EEEecCCCcHHHHHHHHHHHhhcC--CCc-----ccChhHHHHHHHHHHHHHHHhCCCCC----CEEEecCcHHHHHHHH
Confidence 444445678899999988876533 111 11235678888899999999999764 589999998 888788
Q ss_pred HHhcCC-------------CCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCC
Q 023191 130 TALLKP-------------HDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRP 196 (286)
Q Consensus 130 ~a~~~~-------------Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~t 196 (286)
.++..+ ||+|+++++.|.++.. .+...|.+++.++ .+ +++.+|++++++.+++.++
T Consensus 104 ~~~~~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~--------~~~~~g~~~~~v~--~~-~~~~~d~~~l~~~i~~~~~ 172 (397)
T 3f9t_A 104 RCIKNIWREKRRKGLSKNEHPKIIVPITAHFSFEK--------GREMMDLEYIYAP--IK-EDYTIDEKFVKDAVEDYDV 172 (397)
T ss_dssp HHHHHHHHHHHHTTCCCCSSCEEEEETTCCTHHHH--------HHHHHTCEEEEEC--BC-TTSSBCHHHHHHHHHHSCC
T ss_pred HHHHHHHHhhhhhcccCCCCeEEEECCcchhHHHH--------HHHHcCceeEEEe--eC-CCCcCCHHHHHHHHhhcCC
Confidence 888765 9999999977666433 4445676666665 44 4688999999999986578
Q ss_pred cEEEEc-CCC-CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCC---------CCCCC-cceEEEeCCCCCCCCCC
Q 023191 197 KLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVI---------PSPFE-YADVVTTTTHKSLRGPR 264 (286)
Q Consensus 197 k~v~i~-~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~---------~~~~~-~~D~v~~s~~K~l~gp~ 264 (286)
++|+++ ++| +|...|+++|.++|++||+++|+|++|+.+..+.... +..+. ++|++++|+||++++|.
T Consensus 173 ~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~K~~~~~~ 252 (397)
T 3f9t_A 173 DGIIGIAGTTELGTIDNIEELSKIAKENNIYIHVDAAFGGLVIPFLDDKYKKKGVNYKFDFSLGVDSITIDPHKMGHCPI 252 (397)
T ss_dssp CEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEECTTGGGTGGGCCGGGCCTTCCCCCSGGGTCSEEECCTTTTTCCCS
T ss_pred eEEEEECCCCCCCCCCCHHHHHHHHHHhCCeEEEEccccchhhhhcccccccccccccccccccCCeEEEccccccCCCC
Confidence 888887 666 7788999999999999999999999988665432110 11111 48999999999997775
Q ss_pred c-eEEEEecc
Q 023191 265 G-AMIFFRKG 273 (286)
Q Consensus 265 g-G~l~~~~~ 273 (286)
+ |+++++++
T Consensus 253 ~~g~~~~~~~ 262 (397)
T 3f9t_A 253 PSGGILFKDI 262 (397)
T ss_dssp SCEEEEESSG
T ss_pred CceEEEEeCH
Confidence 5 88888765
No 42
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=99.89 E-value=3.1e-23 Score=187.86 Aligned_cols=214 Identities=14% Similarity=0.077 Sum_probs=154.1
Q ss_pred CceecCCCC-CCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-HH
Q 023191 48 GLELIPSEN-FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SN 125 (286)
Q Consensus 48 ~i~L~~~e~-~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~ 125 (286)
.+.|+.+.+ ++++.+++++.+.+.+.+ +++.. .|..........+++++++++++|++++ +|++++|++ ++
T Consensus 27 ~~~ld~~~~~~~~~~v~~a~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~l~~~la~~~g~~~~----~v~~~~g~t~al 99 (406)
T 3cai_A 27 WVHFDAPAGMLIPDSVATTVSTAFRRSG--ASTVG-AHPSARRSAAVLDAAREAVADLVNADPG----GVVLGADRAVLL 99 (406)
T ss_dssp CEECBGGGCCCCCHHHHHHHHHHHHHCC--SSSCS-SSHHHHHHHHHHHHHHHHHHHHHTCCGG----GEEEESCHHHHH
T ss_pred eEEEeCCCcCCCCHHHHHHHHHHHHhcC--CCCCC-ccHHHHHHHHHHHHHHHHHHHHhCCCCC----eEEEeCChHHHH
Confidence 466665554 578999999998876532 11211 1111112345556677999999998754 499999999 77
Q ss_pred HHHHHHh---cCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc
Q 023191 126 FQVYTAL---LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG 202 (286)
Q Consensus 126 ~~~l~a~---~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~ 202 (286)
.+++.++ +++||+|+++++.|.++..+...+ ....|.+++.++ .+++++.+|+++|++.+++ +|++|+++
T Consensus 100 ~~~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~----~~~~g~~v~~v~--~~~~~~~~d~~~l~~~l~~-~~~~v~~~ 172 (406)
T 3cai_A 100 SLLAEASSSRAGLGYEVIVSRLDDEANIAPWLRA----AHRYGAKVKWAE--VDIETGELPTWQWESLISK-STRLVAVN 172 (406)
T ss_dssp HHHHHHTGGGGBTTCEEEEETTSCGGGTHHHHHH----HHHHBCEEEEEC--CCTTTCCCCGGGHHHHCCT-TEEEEEEE
T ss_pred HHHHHHHhhccCCCCEEEEcCCccHHHHHHHHHH----HHhcCCeEEEEe--cCcccCCcCHHHHHHHhCC-CceEEEEe
Confidence 7677777 799999999998887765433211 011455555554 4434678999999999987 89999987
Q ss_pred -CCC-CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCCcceEEEeCCCCCCCCCCce-EEEEecchhhhhc
Q 023191 203 -ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGA-MIFFRKGVKEINK 279 (286)
Q Consensus 203 -~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~gG-~l~~~~~~~~~~~ 279 (286)
++| +|...|+++|.++|+++|+++|+|++|+.|....+.... ++|++++|+||++ ||++| ++++++++.+..+
T Consensus 173 ~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~---~~d~~~~s~~K~~-g~~~G~~~~~~~~~~~~l~ 248 (406)
T 3cai_A 173 SASGTLGGVTDLRAMTKLVHDVGALVVVDHSAAAPYRLLDIRET---DADVVTVNAHAWG-GPPIGAMVFRDPSVMNSFG 248 (406)
T ss_dssp SBCTTTCBBCCCHHHHHHHHHTTCEEEEECTTTTTTCCCCHHHH---CCSEEEEEGGGGT-SCSCEEEEESCHHHHHTSC
T ss_pred CCcCCccccCCHHHHHHHHHHcCCEEEEEcccccCCCCCCchhc---CCCEEEeehhhhc-CCCcCeEEEEehHHHhhcC
Confidence 555 788899999999999999999999999877554332212 3899999999976 56677 9999987765544
No 43
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=99.89 E-value=2.2e-22 Score=181.31 Aligned_cols=235 Identities=10% Similarity=0.125 Sum_probs=167.9
Q ss_pred cccccccChHHHHHHHHHHHHHHcCceecCCCCC--CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHH
Q 023191 24 NAPLEVVDPEIADIIEHEKARQWKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRA 101 (286)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~i~L~~~e~~--~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 101 (286)
++++..+.+..+..+.+.. ...+.++|..+++. +++.+.+++.+.+.... .+ |+...+..++++++.+++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~-~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~-~~------y~~~~g~~~l~~~la~~l 80 (386)
T 1u08_A 9 QSKLPQLGTTIFTQMSALA-QQHQAINLSQGFPDFDGPRYLQERLAHHVAQGA-NQ------YAPMTGVQALREAIAQKT 80 (386)
T ss_dssp CCSCCCCCCCHHHHHHHHH-HHTTCEECCCSSCSSCCCHHHHHHHHHHHHTTC-CS------CCCTTCCHHHHHHHHHHH
T ss_pred chhhhcCCccHHHHHHHHH-hcCCeEEecCCCCCCCCCHHHHHHHHHHHHhhc-cC------CCCCCCCHHHHHHHHHHH
Confidence 4556667777777666543 33567899888763 67999999988775411 12 233345678999999999
Q ss_pred HHHCCCCCCCcce-eEEeCCChH-HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCC
Q 023191 102 LEAFRLDPEKWGV-NVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNEST 179 (286)
Q Consensus 102 ~~~~g~~~~~~~~-~v~~~sG~~-a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~ 179 (286)
++.+|.+.+. . +|++|+|++ ++.+++.+++++||+|+++++.|.++.. .+...|.+++.++ .+.++
T Consensus 81 ~~~~g~~~~~--~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~--------~~~~~g~~~~~v~--~~~~~ 148 (386)
T 1u08_A 81 ERLYGYQPDA--DSDITVTAGATEALYAAITALVRNGDEVICFDPSYDSYAP--------AIALSGGIVKRMA--LQPPH 148 (386)
T ss_dssp HHHHSCCCCT--TTTEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTTHHH--------HHHHTTCEEEEEE--CCTTT
T ss_pred HHHhCCCCCC--CCCEEEcCChHHHHHHHHHHhCCCCCEEEEeCCCchhHHH--------HHHHcCCEEEEee--cCccc
Confidence 8888853221 2 499999998 8887899999999999999977665432 3445666565555 44335
Q ss_pred CCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccC---HHHHHHHHHhcCCEEEEeccccccccccCCCCC--CC---Ccc
Q 023191 180 GYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVIPS--PF---EYA 249 (286)
Q Consensus 180 ~~~d~e~l~~~i~~~~tk~v~i~-~~n-~g~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~--~~---~~~ 249 (286)
+.+|+++|++.+++ ++++|+++ ++| +|...+ +++|+++|++||+++|+|++|+........... .+ .+.
T Consensus 149 ~~~d~~~l~~~l~~-~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~ 227 (386)
T 1u08_A 149 FRVDWQEFAALLSE-RTRLVILNTPHNPSATVWQQADFAALWQAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLRER 227 (386)
T ss_dssp CCCCHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHTTSCCEEEEECTTTTCBCCSSCCCCGGGSHHHHTT
T ss_pred CcCCHHHHHHhhcc-cCEEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEEccccccccCCCCCcChhcccCccCc
Confidence 78999999999976 89999987 666 676654 789999999999999999998754332111110 11 137
Q ss_pred eEEEeCCCCCCCCC--CceEEEEecchhhhhc
Q 023191 250 DVVTTTTHKSLRGP--RGAMIFFRKGVKEINK 279 (286)
Q Consensus 250 D~v~~s~~K~l~gp--~gG~l~~~~~~~~~~~ 279 (286)
|+++.|+||+|+.| +.|++++++++.+..+
T Consensus 228 ~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~ 259 (386)
T 1u08_A 228 AVAVSSFGKTYHMTGWKVGYCVAPAPISAEIR 259 (386)
T ss_dssp EEEEEEHHHHTTCGGGCCEEEECCHHHHHHHH
T ss_pred EEEEecchhhcCCcccceEEEEcCHHHHHHHH
Confidence 89999999998633 3599999988766554
No 44
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=99.89 E-value=1e-22 Score=184.93 Aligned_cols=212 Identities=14% Similarity=0.123 Sum_probs=153.9
Q ss_pred CceecCCCC-CCCHHHHHHhccccccCCCCCCCC--CcccCCcchHHHHHHHHHHHHHHHCCC-CCCCcceeEEeCCChH
Q 023191 48 GLELIPSEN-FTSVSVMQAVGSVMTNKYSEGYPG--ARYYGGNEYIDMAESLCQKRALEAFRL-DPEKWGVNVQSLSGSP 123 (286)
Q Consensus 48 ~i~L~~~e~-~~~~~v~~a~~~~l~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~g~-~~~~~~~~v~~~sG~~ 123 (286)
.++|..+++ ++|+.+++++.+.+.+.. +.+. ...|+. ........+++.+++++|. +++ +|++++|++
T Consensus 29 ~i~l~~~~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~y~~--~~~~~~~~l~~~la~~~~~~~~~----~v~~~~g~t 100 (420)
T 1t3i_A 29 LVYLDNAATSQKPRAVLEKLMHYYENDN--ANVHRGAHQLSV--RATDAYEAVRNKVAKFINARSPR----EIVYTRNAT 100 (420)
T ss_dssp CEECBTTTCCCCCHHHHHHHHHHHHHTC--CCC--CCSHHHH--HHHHHHHHHHHHHHHHTTCSCGG----GEEEESSHH
T ss_pred eEEecCCccCCCCHHHHHHHHHHHHhcc--CCCCcccchHHH--HHHHHHHHHHHHHHHHcCCCCCC----eEEEcCChH
Confidence 678887766 568999999988876522 1111 111211 1123344567889999998 553 599999988
Q ss_pred -HHHHHHHHh----cCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcE
Q 023191 124 -SNFQVYTAL----LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKL 198 (286)
Q Consensus 124 -a~~~~l~a~----~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~ 198 (286)
++.+++.++ +++||+|+++++.|.+...+.. ..+...|.+++.++ .+ +++.+|++++++++++ ++++
T Consensus 101 ~a~~~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~----~~~~~~g~~~~~v~--~~-~~~~~d~~~l~~~l~~-~~~~ 172 (420)
T 1t3i_A 101 EAINLVAYSWGMNNLKAGDEIITTVMEHHSNLVPWQ----MVAAKTGAVLKFVQ--LD-EQESFDLEHFKTLLSE-KTKL 172 (420)
T ss_dssp HHHHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHH----HHHHHHCCEEEEEC--BC-TTSSBCHHHHHHHCCT-TEEE
T ss_pred HHHHHHHHHhhhcccCCCCEEEECcchhHHHHHHHH----HHHHhcCcEEEEec--cC-CCCCcCHHHHHHhhCC-CceE
Confidence 888899999 8999999999988877532211 11234565555555 44 5678999999999987 8999
Q ss_pred EEEc-CCC-CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCCcceEEEeCCCCCCCCCCc-eEEEEecchh
Q 023191 199 IVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVK 275 (286)
Q Consensus 199 v~i~-~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~g-G~l~~~~~~~ 275 (286)
|+++ ++| +|...|+++|.++|++||+++|+|++|+.|....+.... ++|++++|+||.+ ||.| |++++++++.
T Consensus 173 v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~---~~di~~~s~sK~~-~~~g~G~~~~~~~~~ 248 (420)
T 1t3i_A 173 VTVVHISNTLGCVNPAEEIAQLAHQAGAKVLVDACQSAPHYPLDVQLI---DCDWLVASGHKMC-APTGIGFLYGKEEIL 248 (420)
T ss_dssp EEEESBCTTTCBBCCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHHH---TCSEEEEEGGGTT-SCTTCEEEEECHHHH
T ss_pred EEEeCCcccccCcCCHHHHHHHHHHcCCEEEEEhhhccCCccCchhhc---CCCEEEEehhhhc-CCCceEEEEEchHHH
Confidence 9887 555 778899999999999999999999999877553222112 3899999999954 6666 9999998876
Q ss_pred hhhc
Q 023191 276 EINK 279 (286)
Q Consensus 276 ~~~~ 279 (286)
+..+
T Consensus 249 ~~~~ 252 (420)
T 1t3i_A 249 EAMP 252 (420)
T ss_dssp HHSC
T ss_pred hhcC
Confidence 6554
No 45
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=99.89 E-value=2e-23 Score=188.71 Aligned_cols=205 Identities=14% Similarity=0.139 Sum_probs=151.7
Q ss_pred cCceecCCCC-CCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-H
Q 023191 47 KGLELIPSEN-FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-S 124 (286)
Q Consensus 47 ~~i~L~~~e~-~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a 124 (286)
+.+.|+.+.+ ++++.+++++.+.+.+.+ +++.. .+.......++.+++++++++++|++++ +|++++|++ +
T Consensus 20 ~~iyld~~~~~~~~~~v~~a~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~l~~~la~~~~~~~~----~v~~~~g~t~a 92 (400)
T 3vax_A 20 HMTYLDAAATTRVDQRVADIVLHWMTAEF--GNAGS-RHEYGIRAKRGVERAREYLASTVSAEPD----ELIFTSGATES 92 (400)
T ss_dssp --CCCCCCCCSSSCHHHHHHHHHHHHHHH--SCSSC-HHHHHHHHHHHHHHHHHHHHHHTTCCGG----GEEEESCHHHH
T ss_pred CcEEecCCCCCCCCHHHHHHHHHHHHhcc--CCCcc-cchhHHHHHHHHHHHHHHHHHHcCCCCC----cEEEeCCHHHH
Confidence 3456654444 678999999998876533 22221 1111223456667788999999999864 499999998 8
Q ss_pred HHHHHHHhc----CCCC-eEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEE
Q 023191 125 NFQVYTALL----KPHD-RIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLI 199 (286)
Q Consensus 125 ~~~~l~a~~----~~Gd-~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v 199 (286)
+.+++.+++ ++|| +|++++++|+++......+ ...|.+++.++ .+ +++.+|+++|++++++ ++++|
T Consensus 93 l~~~~~~l~~~~~~~gd~~Vl~~~~~~~~~~~~~~~~-----~~~g~~~~~v~--~~-~~~~~d~~~l~~~i~~-~~~~v 163 (400)
T 3vax_A 93 NNIALLGLAPYGERTGRRHIITSAIEHKAVLEPLEHL-----AGRGFEVDFLT--PG-PSGRISVEGVMERLRP-DTLLV 163 (400)
T ss_dssp HHHHHHTTHHHHHHHTCCEEEEETTSCHHHHHHHHHH-----HTTTCEEEEEC--CC-TTCCCCHHHHHTTCCT-TEEEE
T ss_pred HHHHHHHHHHhhccCCCCEEEECccccHhHHHHHHHH-----HhcCCeEEEEc--cC-CCCCcCHHHHHHhcCC-CceEE
Confidence 887888887 8999 9999998887765433211 12455555554 44 4688999999999987 89999
Q ss_pred EEc-CCC-CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCCcceEEEeCCCCCCCCCCc-eEEE-Eec
Q 023191 200 VAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIF-FRK 272 (286)
Q Consensus 200 ~i~-~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~g-G~l~-~~~ 272 (286)
+++ ++| +|...|+++|.++|++||+++|+|++|+.|....+... + +|++++|+|| +.||.| |+++ +++
T Consensus 164 ~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~~~~~~--~--~d~~~~s~~K-~~g~~g~g~~~~~~~ 235 (400)
T 3vax_A 164 SLMHVNNETGVIQPVAELAQQLRATPTYLHVDAAQGYGKVPGDLTT--P--IDMISISGHK-IGAPKGVGALVTRRR 235 (400)
T ss_dssp ECCSBCTTTCBBCCHHHHHHHHTTSSCEEEEECTTTTTTSGGGGGS--C--CSEEEEETGG-GTSCSSCEEEEECBC
T ss_pred EEECCCCCceeeCcHHHHHHHHHhcCCEEEEEhhhhcCCCCcChhh--c--CcEEEEeHHH-hCCCCceEEEEEecc
Confidence 987 666 77889999999999999999999999987765543322 1 7899999999 556777 9998 877
No 46
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=99.88 E-value=1e-22 Score=184.85 Aligned_cols=214 Identities=17% Similarity=0.078 Sum_probs=153.9
Q ss_pred HcCceecCCCC-----CCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCC
Q 023191 46 WKGLELIPSEN-----FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLS 120 (286)
Q Consensus 46 ~~~i~L~~~e~-----~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~s 120 (286)
.+.++|..+++ ++++.+++++.+.+.+.. .+ |+...+..++++++.+++.+.+|++.+. .+|++|+
T Consensus 38 ~~~i~l~~~~~~~~~~~~~~~v~~a~~~~~~~~~-~~------y~~~~g~~~l~~~la~~l~~~~g~~~~~--~~v~~t~ 108 (406)
T 1xi9_A 38 IKVIRLNIGDPVKFDFQPPEHMKEAYCKAIKEGH-NY------YGDSEGLPELRKAIVEREKRKNGVDITP--DDVRVTA 108 (406)
T ss_dssp CCCEECCCCCGGGTTCCCCHHHHHHHHHHHHTTC-CS------CCCTTCCHHHHHHHHHHHHHHHCCCCCG--GGEEEES
T ss_pred CCEEEecCCCCCcCCCCCCHHHHHHHHHHHhcCC-CC------CCCCCCcHHHHHHHHHHHHHhcCCCCCH--HHEEEcC
Confidence 36789988877 457899999988775421 12 3333556789999999998887764322 3699999
Q ss_pred ChH-HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEE
Q 023191 121 GSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLI 199 (286)
Q Consensus 121 G~~-a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v 199 (286)
|++ ++.+++.+++++||+|+++++.|.++. ..+...|.+++.++++.+ +++.+|+++|++.+++ ++++|
T Consensus 109 g~~~al~~~~~~l~~~gd~Vl~~~~~~~~~~--------~~~~~~g~~~~~v~~~~~-~~~~~d~~~l~~~l~~-~~~~v 178 (406)
T 1xi9_A 109 AVTEALQLIFGALLDPGDEILVPGPSYPPYT--------GLVKFYGGKPVEYRTIEE-EDWQPDIDDIRKKITD-RTKAI 178 (406)
T ss_dssp HHHHHHHHHHHHHCCTTCEEEEEESCCHHHH--------HHHHHTTCEEEEEEEEGG-GTSEECHHHHHHHCCT-TEEEE
T ss_pred ChHHHHHHHHHHhCCCCCEEEEcCCCCccHH--------HHHHHcCCEEEEeecCCC-cCCcCCHHHHHHhhCc-CceEE
Confidence 988 888889999999999999996665543 234456666666654321 3567899999999987 89998
Q ss_pred EEc-CCC-CCCccC---HHHHHHHHHhcCCEEEEeccccccccccCCCCC--CC-Ccc-eEEEeCCCCCCC--CCCceEE
Q 023191 200 VAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVIPS--PF-EYA-DVVTTTTHKSLR--GPRGAMI 268 (286)
Q Consensus 200 ~i~-~~n-~g~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~--~~-~~~-D~v~~s~~K~l~--gp~gG~l 268 (286)
+++ ++| +|...+ +++|+++|++||+++|+|++|+.+... +.... .+ .+. |++++|+||+++ |.+.|++
T Consensus 179 ~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~-~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~ 257 (406)
T 1xi9_A 179 AVINPNNPTGALYDKKTLEEILNIAGEYEIPVISDEIYDLMTYE-GEHISPGSLTKDVPVIVMNGLSKVYFATGWRLGYM 257 (406)
T ss_dssp EEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBSS-SCCCCHHHHCSSSCEEEEEESTTTTCCGGGCCEEE
T ss_pred EEECCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEcCccccccC-CCCCCHHHcCCCceEEEEeccccccCCCccEEEEE
Confidence 887 666 666555 899999999999999999998765431 11100 01 135 889999999985 3345998
Q ss_pred E--Eec----chhhhhc
Q 023191 269 F--FRK----GVKEINK 279 (286)
Q Consensus 269 ~--~~~----~~~~~~~ 279 (286)
+ .++ ++.+..+
T Consensus 258 ~~~~~~~~~~~l~~~l~ 274 (406)
T 1xi9_A 258 YFVDPENKLSEVREAID 274 (406)
T ss_dssp EEECTTCTTHHHHHHHH
T ss_pred EEecCchhHHHHHHHHH
Confidence 8 777 6655443
No 47
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=99.88 E-value=5.3e-23 Score=188.05 Aligned_cols=214 Identities=15% Similarity=0.146 Sum_probs=141.2
Q ss_pred cCceecCCCC-CCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-H
Q 023191 47 KGLELIPSEN-FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-S 124 (286)
Q Consensus 47 ~~i~L~~~e~-~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a 124 (286)
+.+.|+.+.+ ++|+.+++++.+.+.+.+ +|+... |.......++.+.+++++++++|++++ +|++++|++ +
T Consensus 18 ~~~~Ld~~~~~~~~~~v~~a~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~l~~~la~~~g~~~~----~v~~~~g~t~a 90 (432)
T 3a9z_A 18 RKVYMDYNATTPLEPEVIQAVTEAMKEAW--GNPSSS-YVAGRKAKDIINTARASLAKMIGGKPQ----DIIFTSGGTES 90 (432)
T ss_dssp CCEECBTTTCCCCCHHHHHHHHHHHHHCC--SCTTCS-SHHHHHHHHHHHHHHHHHHHHHTCCGG----GEEEESCHHHH
T ss_pred CcEEeeCCccCCCCHHHHHHHHHHHHHhc--CCCccC-cHHHHHHHHHHHHHHHHHHHHcCCCcC----eEEEeCChHHH
Confidence 4577776665 579999999998876532 343321 222223445566788999999998764 599999988 8
Q ss_pred HHHHHHHhc--------CCCCeEEeccCCCCcccCcc-----ccc----cccccccceeeeEEEecccCCCCCCCCHHHH
Q 023191 125 NFQVYTALL--------KPHDRIMALDLPHGGHLSHG-----YQT----DTKKISAVSIFFETMPYRLNESTGYIDYDQL 187 (286)
Q Consensus 125 ~~~~l~a~~--------~~Gd~Vl~~~~~~~~~~~~~-----~~~----~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l 187 (286)
+.+++.+++ ++||+|+++.|.|.++.... +.. ....+...|.+++.++ .+.+++.+|+++|
T Consensus 91 ~~~~~~~~~~~~~~~~~~~gd~vl~~~p~y~~~~~i~~~~~~h~s~~~~~~~~~~~~g~~v~~v~--~~~~~~~~d~~~l 168 (432)
T 3a9z_A 91 NNLVIHSTVRCFHEQQTLQGRTVDQISPEEGTRPHFITCTVEHDSIRLPLEHLVEDQVAEVTFVP--VSKVNGQVEVEDI 168 (432)
T ss_dssp HHHHHHHHHHHHHHHHHHC------------CCCEEEEETTCCHHHHHHHHHHHHTTSCEEEEEC--CCTTTSSCCHHHH
T ss_pred HHHHHHHHHhhhhhccccCCccccccccccccCCeEEEecCcchhHHHHHHHHHHhcCcEEEEEe--cCcccCCcCHHHH
Confidence 877888775 59999999986665431000 000 0001122455565555 4433578999999
Q ss_pred HHHhhhcCCcEEEEc-CCC-CCCccCHHHHHHHHHhcC----------CEEEEeccccccccccCCCCCCCCcceEEEeC
Q 023191 188 EKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQK----------AIMLADMAHISGLVAAGVIPSPFEYADVVTTT 255 (286)
Q Consensus 188 ~~~i~~~~tk~v~i~-~~n-~g~~~~l~~I~~ia~~~~----------~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s 255 (286)
++++++ +|++|+++ ++| +|...|+++|.++|++++ +++|+|++|+.|....++... ++|++++|
T Consensus 169 ~~~i~~-~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~~~~~~~~~~livDea~~~~~~~~~~~~~---~~d~~~~s 244 (432)
T 3a9z_A 169 LAAVRP-TTCLVTIMLANNETGVIMPISEISRRIKALNQIRAASGLPRVLVHTDAAQALGKRRVDVEDL---GVDFLTIV 244 (432)
T ss_dssp HHTCCT-TEEEEECCSBCTTTCBBCCHHHHHHHHHHHHHHHHHHTCCCCEEEEECTTTTTTSCCCHHHH---CCSEEEEE
T ss_pred HHhccC-CceEEEEECcccCcccccCHHHHHHHHHhcCcccccccCCceEEEEEchhhhCCcccChhhc---CCCEEEEe
Confidence 999987 89999988 555 788999999999999999 999999999876543222111 48999999
Q ss_pred CCCCCCCCCceEEEEecch
Q 023191 256 THKSLRGPRGAMIFFRKGV 274 (286)
Q Consensus 256 ~~K~l~gp~gG~l~~~~~~ 274 (286)
+||++ ||+.|++++++++
T Consensus 245 ~~K~~-g~~~G~~~~~~~~ 262 (432)
T 3a9z_A 245 GHKFY-GPRIGALYVRGVG 262 (432)
T ss_dssp GGGTT-CCSCEEEEETTBT
T ss_pred hhHhc-CCcceEEEEcccc
Confidence 99976 6878999999865
No 48
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=99.88 E-value=1.4e-22 Score=185.18 Aligned_cols=228 Identities=15% Similarity=0.185 Sum_probs=153.8
Q ss_pred ccChHHH---HHHHHHHHHHHcCceecCCCCCCCHHHHHHhccccccC--C--CCCCCCCcccCCcchHHHHHHHHHHHH
Q 023191 29 VVDPEIA---DIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNK--Y--SEGYPGARYYGGNEYIDMAESLCQKRA 101 (286)
Q Consensus 29 ~~~~~~~---~~~~~~~~~~~~~i~L~~~e~~~~~~v~~a~~~~l~~~--~--~~~~~~~~~~~~~~~~~~l~~~~~~~~ 101 (286)
.+++++. +.+..+..++...+.+...+|. +.|++++.+..... + ..+|. |+. .+.++ +++.+
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~n~--~~Vl~a~~~~~~~~~~~~~~~gy~----Y~~-~g~~~----Le~~l 83 (427)
T 3hvy_A 15 NINERVLELYERALNDVEKEFKYYDEIREYNQ--LKVLKAFQEERISESHFTNSSGYG----YND-IGRDS----LDRVY 83 (427)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHTTCCGGGSCCCCTTC----TTC-HHHHH----HHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhH--HHHHHHHHHHHHHHHhcccCcCCC----CCc-hhHHH----HHHHH
Confidence 3456555 4444444455555666555554 78888887754321 1 11221 222 23444 44888
Q ss_pred HHHCCCCCCCcceeEE---eCCChHHHHHHHHHhcCCCCeEEecc-CCCCcccCccc--c-ccccccccceeeeEEEecc
Q 023191 102 LEAFRLDPEKWGVNVQ---SLSGSPSNFQVYTALLKPHDRIMALD-LPHGGHLSHGY--Q-TDTKKISAVSIFFETMPYR 174 (286)
Q Consensus 102 ~~~~g~~~~~~~~~v~---~~sG~~a~~~~l~a~~~~Gd~Vl~~~-~~~~~~~~~~~--~-~~~~~~~~~g~~~~~v~~~ 174 (286)
++++|.+. .++ +++|+.++.+++.++++|||+|++.+ +.|.++..... . .....+...|.+++.++
T Consensus 84 A~l~g~e~-----alv~p~~~sGt~A~~~al~all~pGD~Vl~~~~~~y~~~~~~~g~~~~~~~~~l~~~G~~~~~v~-- 156 (427)
T 3hvy_A 84 ANIFNTES-----AFVRPHFVNGTHAIGAALFGNLRPNDTMMSICGMPYDTLHDIIGMDDSKKVGSLREYGVKYKMVD-- 156 (427)
T ss_dssp HHHHTCSE-----EEEETTCCSHHHHHHHHHHHTCCTTCEEEECSSSCCGGGHHHHTCCTTCCSCCTGGGTCEEEECC--
T ss_pred HHHhCCCc-----eEEeCCCCcHHHHHHHHHHHhcCCCCEEEEeCCCCchhHHHHhccccchhhhHHHHcCCEEEEec--
Confidence 99999875 355 56676688889999999999999998 77766531110 0 00012233565555444
Q ss_pred cCCCCCCCCHHHHHHHhhh-cCCcEEEEcC----CC--CCCccCHHHHHHHHHh--cCCEEEEeccccccccccCCCCCC
Q 023191 175 LNESTGYIDYDQLEKSATL-FRPKLIVAGA----SA--YARLYDYERIRKVCNK--QKAIMLADMAHISGLVAAGVIPSP 245 (286)
Q Consensus 175 ~~~~~~~~d~e~l~~~i~~-~~tk~v~i~~----~n--~g~~~~l~~I~~ia~~--~~~~vivD~a~~~g~~~~~~~~~~ 245 (286)
. +++.+|++++++++++ .+||+|+++. ++ ++...++++|+++|++ +|+++++|++|+.+.... .+
T Consensus 157 ~--~~~~~d~e~l~~~i~~~~~tklV~i~~s~gyp~nptg~v~dl~~i~~ia~~~~~g~~livD~a~~~~~~~~----~p 230 (427)
T 3hvy_A 157 L--KDGKVDINTVKEELKKDDSIKLIHIQRSTGYGWRKSLRIAEIAEIIKSIREVNENVIVFVDNCYGEFVEEK----EP 230 (427)
T ss_dssp C--BTTBCCHHHHHHHHHHCTTEEEEEEESSCCSSSSCCCCHHHHHHHHHHHHHHCSSSEEEEECTTCTTTSSS----CG
T ss_pred C--CCCCcCHHHHHHHhhCCCCCEEEEEECCCCCCCCccccHHHHHHHHHHHHHhCCCCEEEEECCccccccCC----CC
Confidence 3 3578999999999983 3899999964 44 4477899999999999 899999999987665321 22
Q ss_pred CC-cceEEEeCCCCCCCC---CCceEEEEecchhhhhcc
Q 023191 246 FE-YADVVTTTTHKSLRG---PRGAMIFFRKGVKEINKQ 280 (286)
Q Consensus 246 ~~-~~D~v~~s~~K~l~g---p~gG~l~~~~~~~~~~~~ 280 (286)
+. ++|++++|+||+++| |.||++++++++.+..+.
T Consensus 231 ~~~gaDiv~~S~sK~lgg~g~~~GG~i~~~~~li~~l~~ 269 (427)
T 3hvy_A 231 TDVGADIIAGSLIKNIGGGIATTGGYIAGKEEYVTQATF 269 (427)
T ss_dssp GGGTCSEEEEETTSGGGTTTCCSCEEEEECHHHHHHHHH
T ss_pred cccCCeEEEECCcccccccccceEEEEEECHHHHHHHHH
Confidence 22 489999999999988 788999999887766553
No 49
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=99.88 E-value=2.1e-22 Score=180.88 Aligned_cols=227 Identities=11% Similarity=0.086 Sum_probs=160.1
Q ss_pred HHHHHHHHHHHHH----HcCceecCCCCC--CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCC
Q 023191 33 EIADIIEHEKARQ----WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFR 106 (286)
Q Consensus 33 ~~~~~~~~~~~~~----~~~i~L~~~e~~--~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g 106 (286)
+.+..+....... .+.++|..+++. +++.+++++.+.+.+... ..|+...+..++++++.+++.+.+|
T Consensus 8 ~~~~~~~~~~~~~~~~g~~~idl~~~~~~~~~~~~v~~a~~~~~~~~~~------~~y~~~~~~~~l~~~ia~~~~~~~g 81 (376)
T 2dou_A 8 SVFLVVDEAKRKARERGVGLIDLSIGSTDLPPPEAPLKALAEALNDPTT------YGYCLKSCTLPFLEEAARWYEGRYG 81 (376)
T ss_dssp HHHHHHHHHHHHHHHTTCCCEECSSCCCCCCCCHHHHHHHHHHTTCGGG------SSCCCHHHHHHHHHHHHHHHHHHHS
T ss_pred chHHHHHHHHHHhhccCCCEEeccCCCCCCCCCHHHHHHHHHHHhCCCc------CCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 5555554443322 357899888874 589999999887754111 1233335678899888888888889
Q ss_pred CCCCCcce-eEEeCCChH-HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCH
Q 023191 107 LDPEKWGV-NVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDY 184 (286)
Q Consensus 107 ~~~~~~~~-~v~~~sG~~-a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~ 184 (286)
++.+. . +|++|+|++ ++.+++.+++++||+|+++++.|.++. ..+...|.+++.+++ .+++.+|+
T Consensus 82 ~~~~~--~~~v~~~~g~~~a~~~~~~~l~~~gd~vl~~~p~y~~~~--------~~~~~~g~~~~~~~~---~~~~~~d~ 148 (376)
T 2dou_A 82 VGLDP--RREALALIGSQEGLAHLLLALTEPEDLLLLPEVAYPSYF--------GAARVASLRTFLIPL---REDGLADL 148 (376)
T ss_dssp CCCCT--TTSEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCHHHH--------HHHHHTTCEEEEECB---CTTSSBCG
T ss_pred CCCCC--CccEEEcCCcHHHHHHHHHHhcCCCCEEEECCCCcHhHH--------HHHHHcCCEEEEeeC---CCCCCCCH
Confidence 85211 1 599999998 887789999999999999996555543 244456666665653 25677999
Q ss_pred HHHHHHhhhcCCcEEEEc-CCC-CCCccC---HHHHHHHHHhcCCEEEEeccccccccccCCCC-CCC---CcceEEEeC
Q 023191 185 DQLEKSATLFRPKLIVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVIP-SPF---EYADVVTTT 255 (286)
Q Consensus 185 e~l~~~i~~~~tk~v~i~-~~n-~g~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~-~~~---~~~D~v~~s 255 (286)
+++++.+++ ++++|+++ ++| +|...+ +++|+++|++||+++|+|++|+.+........ ..+ .+.++++.|
T Consensus 149 ~~l~~~l~~-~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s 227 (376)
T 2dou_A 149 KAVPEGVWR-EAKVLLLNYPNNPTGAVADWGYFEEALGLARKHGLWLIHDNPYVDQVYEGEAPSPLALPGAKERVVELFS 227 (376)
T ss_dssp GGSCHHHHH-HEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSTTGGGTEEEEEE
T ss_pred HHHHHhhcc-CceEEEECCCCCCcCccCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCChhhcCCCCCcEEEEec
Confidence 999998876 89999997 666 676655 67889999999999999999876543211000 111 135788999
Q ss_pred CCCCCC--CCCceEEEEecchhhhhc
Q 023191 256 THKSLR--GPRGAMIFFRKGVKEINK 279 (286)
Q Consensus 256 ~~K~l~--gp~gG~l~~~~~~~~~~~ 279 (286)
++|+|+ |.+.|++++++++.+..+
T Consensus 228 ~sK~~~~~G~r~G~~~~~~~~~~~l~ 253 (376)
T 2dou_A 228 LSKSYNLAGFRLGFALGSEEALARLE 253 (376)
T ss_dssp HHHHHTCGGGCCEEEEECHHHHHHHH
T ss_pred chhhcCChhheeEEEecCHHHHHHHH
Confidence 999884 445599999888766554
No 50
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=99.88 E-value=2.9e-22 Score=180.90 Aligned_cols=232 Identities=11% Similarity=0.024 Sum_probs=163.1
Q ss_pred cccccChHHHHHHHHHHHH-----HHcCceecCCCCC--CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHH
Q 023191 26 PLEVVDPEIADIIEHEKAR-----QWKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQ 98 (286)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~-----~~~~i~L~~~e~~--~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 98 (286)
+++.+.++.+..+.+..++ ..+.|+|..+++. +++.+++++.+.+.... +| +...+..++++++.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~--~y------~~~~g~~~lr~~la 76 (396)
T 3jtx_A 5 LLKQLKPYPFARLHEAMQGISAPEGMEAVPLHIGEPKHPTPKVITDALTASLHELE--KY------PLTAGLPELRQACA 76 (396)
T ss_dssp HHHHCCSCHHHHHHHHTTTCCCCTTCCCEECSCCSCCSCCCHHHHHHHHHTGGGGG--SC------CCTTCCHHHHHHHH
T ss_pred hhccCCCChHHHHHHHHHhhhhccCCCeEEeCCcCCCCCCCHHHHHHHHHHhhhcc--CC------CCCCCcHHHHHHHH
Confidence 3445555555555443322 1357999888874 58999999988775311 23 33345678999999
Q ss_pred HHHHHHCCCC---CCCcceeEEeCCChH-HHHHHHHHhcCCC-----CeEEeccCCCCcccCccccccccccccceeeeE
Q 023191 99 KRALEAFRLD---PEKWGVNVQSLSGSP-SNFQVYTALLKPH-----DRIMALDLPHGGHLSHGYQTDTKKISAVSIFFE 169 (286)
Q Consensus 99 ~~~~~~~g~~---~~~~~~~v~~~sG~~-a~~~~l~a~~~~G-----d~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 169 (286)
+++.+.+|.+ ++. +|++|+|++ ++.+++.+++++| |+|+++.+.|.++ ...+...|.+++
T Consensus 77 ~~l~~~~g~~~~~~~~---~i~~t~g~~~al~~~~~~~~~~g~~~~~d~vl~~~p~~~~~--------~~~~~~~g~~~~ 145 (396)
T 3jtx_A 77 NWLKRRYDGLTVDADN---EILPVLGSREALFSFVQTVLNPVSDGIKPAIVSPNPFYQIY--------EGATLLGGGEIH 145 (396)
T ss_dssp HHHHHHTTTCCCCTTT---SEEEESSHHHHHHHHHHHHCCC---CCCCEEEEEESCCHHH--------HHHHHHTTCEEE
T ss_pred HHHHHhcCCCCCCCCC---eEEEcCCcHHHHHHHHHHHhCCCCccCCCEEEEcCCCcHhH--------HHHHHHcCCEEE
Confidence 9999999964 541 499999999 8887899999997 7999999555444 334456676666
Q ss_pred EEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccCH---HHHHHHHHhcCCEEEEeccccccccccCCCCC
Q 023191 170 TMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDY---ERIRKVCNKQKAIMLADMAHISGLVAAGVIPS 244 (286)
Q Consensus 170 ~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~-~~n-~g~~~~l---~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~ 244 (286)
.+++ +.+++.+|++++++++++ ++++|+++ ++| +|...+. ++|+++|++||+++|+|++|+...........
T Consensus 146 ~v~~--~~~g~~~d~~~l~~~~~~-~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~ 222 (396)
T 3jtx_A 146 FANC--PAPSFNPDWRSISEEVWK-RTKLVFVCSPNNPSGSVLDLDGWKEVFDLQDKYGFIIASDECYSEIYFDGNKPLG 222 (396)
T ss_dssp EEEC--CTTTCCCCGGGSCHHHHH-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEECTTTTCCSTTCCCCC
T ss_pred Eeec--CCCCCccCHHHHHHhhcc-CcEEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCch
Confidence 6664 445678999999999988 89999997 666 6766664 45999999999999999998753322111100
Q ss_pred C---------CCcceEEEeCCCCCCC--CCCceEEEEecchhhhhc
Q 023191 245 P---------FEYADVVTTTTHKSLR--GPRGAMIFFRKGVKEINK 279 (286)
Q Consensus 245 ~---------~~~~D~v~~s~~K~l~--gp~gG~l~~~~~~~~~~~ 279 (286)
. -.+.++++.|++|.++ |.+.|+++.++++.+..+
T Consensus 223 ~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~ 268 (396)
T 3jtx_A 223 CLQAAAQLGRSRQKLLMFTSLSKRSNVPGLRSGFVAGDAELLKNFL 268 (396)
T ss_dssp HHHHHHHTTCCCTTEEEEEESTTTSSCGGGCCEEEEECHHHHHHHH
T ss_pred HHhhhhhcccccCcEEEEeccccccCCcccceEEEEeCHHHHHHHH
Confidence 0 0236789999999764 344599999888776554
No 51
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=99.88 E-value=6.8e-22 Score=176.57 Aligned_cols=227 Identities=14% Similarity=0.068 Sum_probs=156.5
Q ss_pred ccccccccChHHHHHHHHHHHHH---HcCceecCCCCC--CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHH
Q 023191 23 LNAPLEVVDPEIADIIEHEKARQ---WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLC 97 (286)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~---~~~i~L~~~e~~--~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~ 97 (286)
+++.++.+.++.......+..+. .+.|+|..++++ +++.+++++.+.+.... +|+. .+..++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~--~y~~-------~~~~~l---- 72 (363)
T 3ffh_A 6 WKKSLAGLSSYKPGKREEEVMAELGLTKITKLSSNENPLGTSKKVAAIQANSSVETE--IYPD-------GWASSL---- 72 (363)
T ss_dssp CCGGGTTCCC----CHHHHHHHTTTCSCCEECSSCSCTTCCCHHHHHHHHTCBSCCC--BC-----------CHHH----
T ss_pred hhHHHHhCCCCCCCCCHHHHHHhcCCCceEEccCCCCCCCCCHHHHHHHHHHHHHhh--cCCC-------cchHHH----
Confidence 34455555565544333332222 357999999885 68999999988775421 2321 233444
Q ss_pred HHHHHHHCCCCCCCcceeEEeCCChH-HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccC
Q 023191 98 QKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLN 176 (286)
Q Consensus 98 ~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~ 176 (286)
++.+++++|++++ +|++|+|++ ++.+++.+++++||+|+++++.|.++ ...+...|.+++.++ .+
T Consensus 73 r~~la~~~~~~~~----~v~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~--------~~~~~~~g~~~~~v~--~~ 138 (363)
T 3ffh_A 73 RKEVADFYQLEEE----ELIFTAGVDELIELLTRVLLDTTTNTVMATPTFVQY--------RQNALIEGAEVREIP--LL 138 (363)
T ss_dssp HHHHHHHHTCCGG----GEEEESSHHHHHHHHHHHHCSTTCEEEEEESSCHHH--------HHHHHHHTCEEEEEE--CC
T ss_pred HHHHHHHhCCChh----hEEEeCCHHHHHHHHHHHHccCCCEEEEcCCChHHH--------HHHHHHcCCEEEEec--CC
Confidence 4777788888764 499999999 88878999999999999999555443 334456676666565 44
Q ss_pred CCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccCHHHHHHHHHhc--CCEEEEeccccccccccCCCCCCC-----C
Q 023191 177 ESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQ--KAIMLADMAHISGLVAAGVIPSPF-----E 247 (286)
Q Consensus 177 ~~~~~~d~e~l~~~i~~~~tk~v~i~-~~n-~g~~~~l~~I~~ia~~~--~~~vivD~a~~~g~~~~~~~~~~~-----~ 247 (286)
+++.+|++++++.+++ ++++|+++ ++| +|...|.++|.++++.+ |+++|+|++|+.... .. ....+ .
T Consensus 139 -~~~~~d~~~l~~~i~~-~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~-~~-~~~~~~~~~~~ 214 (363)
T 3ffh_A 139 -QDGEHDLEGMLNAIDE-KTTIVWICNPNNPTGNYIELADIQAFLDRVPSDVLVVLDEAYIEYVT-PQ-PEKHEKLVRTY 214 (363)
T ss_dssp -TTSCCCHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHTTSCTTSEEEEECTTGGGCS-SC-CCCCGGGGGTC
T ss_pred -CCCCcCHHHHHHhccc-CCCEEEEeCCCCCcCCCcCHHHHHHHHHhCCCCcEEEEeCchHhhcC-cc-ccCHHHHhhcC
Confidence 3688999999999987 89999997 666 77889999999999888 999999999874332 11 11111 1
Q ss_pred cceEEEeCCCCCCC--CCCceEEEEecchhhhhcc
Q 023191 248 YADVVTTTTHKSLR--GPRGAMIFFRKGVKEINKQ 280 (286)
Q Consensus 248 ~~D~v~~s~~K~l~--gp~gG~l~~~~~~~~~~~~ 280 (286)
..++++.|++|+++ |.+.|++++++++.+..++
T Consensus 215 ~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~l~~ 249 (363)
T 3ffh_A 215 KNLIITRTFSKIYGLASARVGYGIADKEIIRQLNI 249 (363)
T ss_dssp TTEEEEEESSSTTCCSSCCCEEEEECHHHHHHHHH
T ss_pred CCEEEEeechhhhcCchhceeeeecCHHHHHHHHH
Confidence 24578999999884 3344999998887766554
No 52
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=99.88 E-value=2.4e-22 Score=180.80 Aligned_cols=228 Identities=16% Similarity=0.150 Sum_probs=159.8
Q ss_pred cccccccChHHHHHHHHHHHHHHcCceecCCCCC--CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHH
Q 023191 24 NAPLEVVDPEIADIIEHEKARQWKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRA 101 (286)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~i~L~~~e~~--~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 101 (286)
++++..+.++.+..+.+.. ...+.++|..+++. +++.+.+++.+.+.. . ..| +...+..+++ +.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~-~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~-~-~~y------~~~~~~~~l~----~~l 70 (381)
T 1v2d_A 4 HPRTEAAKESIFPRMSGLA-QRLGAVNLGQGFPSNPPPPFLLEAVRRALGR-Q-DQY------APPAGLPALR----EAL 70 (381)
T ss_dssp CGGGGGC---CHHHHHHHH-HHHTCEECCCCSCSSCCCHHHHHHHHHHTTT-S-CSC------CCTTCCHHHH----HHH
T ss_pred hhhhhhcCccHHHHHHHHH-hcCCeEEecCCCCCCCCCHHHHHHHHHHHHH-h-cCC------CCCCCCHHHH----HHH
Confidence 4555666666676666643 33578999888774 578999999887754 1 122 2223445555 666
Q ss_pred HHHCCCCCCCcceeEEeCCChH-HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCC
Q 023191 102 LEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTG 180 (286)
Q Consensus 102 ~~~~g~~~~~~~~~v~~~sG~~-a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~ 180 (286)
+++++++++ +|++|+|++ ++.+++.+++++||+|+++++.|.++.. .+...|.+++.++++..++++
T Consensus 71 a~~~~~~~~----~v~~~~g~~~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~--------~~~~~g~~~~~v~~~~~~~~~ 138 (381)
T 1v2d_A 71 AEEFAVEPE----SVVVTSGATEALYVLLQSLVGPGDEVVVLEPFFDVYLP--------DAFLAGAKARLVRLDLTPEGF 138 (381)
T ss_dssp HHHHTSCGG----GEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTTHHH--------HHHHTTCEEEEEECEEETTEE
T ss_pred HHhcCCChh----hEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHH--------HHHHcCCEEEEEeCCCCCccC
Confidence 667888764 499999998 8888899999999999999977766532 334556666556532102347
Q ss_pred CCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccC---HHHHHHHHHhcCCEEEEeccccccccccCCCCCC----CCcceE
Q 023191 181 YIDYDQLEKSATLFRPKLIVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVIPSP----FEYADV 251 (286)
Q Consensus 181 ~~d~e~l~~~i~~~~tk~v~i~-~~n-~g~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~----~~~~D~ 251 (286)
.+|++++++.+++ ++++|+++ ++| +|...+ +++|+++|++||+++|+|++|+.... +..... ..+.|+
T Consensus 139 ~~d~~~l~~~l~~-~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~--g~~~~~~~~~~~~~~~ 215 (381)
T 1v2d_A 139 RLDLSALEKALTP-RTRALLLNTPMNPTGLVFGERELEAIARLARAHDLFLISDEVYDELYY--GERPRRLREFAPERTF 215 (381)
T ss_dssp ECCHHHHHTTCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBS--SSCCCCHHHHCTTTEE
T ss_pred CcCHHHHHHhcCc-CCEEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEEcCcccccc--CCCCCCHHHhcCCCEE
Confidence 8999999999976 88999987 666 676655 88999999999999999999875433 111111 124899
Q ss_pred EEeCCCCCCC--CCCceEEEEecchhhhhc
Q 023191 252 VTTTTHKSLR--GPRGAMIFFRKGVKEINK 279 (286)
Q Consensus 252 v~~s~~K~l~--gp~gG~l~~~~~~~~~~~ 279 (286)
++.|+||+|+ |.+.|++++++++.+..+
T Consensus 216 ~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~ 245 (381)
T 1v2d_A 216 TVGSAGKRLEATGYRVGWIVGPKEFMPRLA 245 (381)
T ss_dssp EEEEHHHHTTCGGGCCEEEECCTTTHHHHH
T ss_pred EEeechhhcCCcccceEEEEeCHHHHHHHH
Confidence 9999999885 334599999988776554
No 53
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=99.88 E-value=2.3e-22 Score=180.98 Aligned_cols=214 Identities=14% Similarity=0.118 Sum_probs=153.2
Q ss_pred cCceecCCCC--CCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-
Q 023191 47 KGLELIPSEN--FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP- 123 (286)
Q Consensus 47 ~~i~L~~~e~--~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~- 123 (286)
+.|+|..+++ ++++.+++++.+.+.+.. .+|+ .. ..++++++++++++.+|.+.+. .+|++|+|++
T Consensus 28 ~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~-~~y~------~~--~~~l~~~la~~l~~~~g~~~~~--~~i~~~~g~~~ 96 (391)
T 3dzz_A 28 KELPMWIAEMDFKIAPEIMASMEEKLKVAA-FGYE------SV--PAEYYKAVADWEEIEHRARPKE--DWCVFASGVVP 96 (391)
T ss_dssp TCEECCSSCCSSCCCHHHHHHHHHHHTTCC-CCCB------CC--CHHHHHHHHHHHHHHHSCCCCG--GGEEEESCHHH
T ss_pred CceeccccCCCCCCCHHHHHHHHHHHhcCc-CCCC------CC--CHHHHHHHHHHHHHHhCCCCCH--HHEEECCCHHH
Confidence 5789988876 468999999998876521 1222 11 4688889999999999843222 3599999988
Q ss_pred HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-
Q 023191 124 SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG- 202 (286)
Q Consensus 124 a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~- 202 (286)
++.+++.+++++||+|+++.+.|.++.. .+...|.+++.++++....++.+|++++++++++.++++|+++
T Consensus 97 a~~~~~~~l~~~gd~vl~~~~~~~~~~~--------~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~v~i~~ 168 (391)
T 3dzz_A 97 AISAMVRQFTSPGDQILVQEPVYNMFYS--------VIEGNGRRVISSDLIYENSKYSVNWADLEEKLATPSVRMMVFCN 168 (391)
T ss_dssp HHHHHHHHHSCTTCEEEECSSCCHHHHH--------HHHHTTCEEEECCCEEETTEEECCHHHHHHHHTSTTEEEEEEES
T ss_pred HHHHHHHHhCCCCCeEEECCCCcHHHHH--------HHHHcCCEEEEeeeeecCCceeecHHHHHHHHhccCceEEEEEC
Confidence 8888999999999999999966665432 4445666665555432223456999999999984489999887
Q ss_pred CCC-CCCc---cCHHHHHHHHHhcCCEEEEeccccccccccCCCCC--CCC--cce--EEEeCCCCCC--CCCCceEEEE
Q 023191 203 ASA-YARL---YDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPS--PFE--YAD--VVTTTTHKSL--RGPRGAMIFF 270 (286)
Q Consensus 203 ~~n-~g~~---~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~--~~~--~~D--~v~~s~~K~l--~gp~gG~l~~ 270 (286)
++| +|.. .++++|+++|++||+++|+|++|+........... .+. ..| +++.|+||++ .|.+.|++++
T Consensus 169 p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~d~~i~~~s~sK~~g~~G~r~G~~~~ 248 (391)
T 3dzz_A 169 PHNPIGYAWSEEEVKRIAELCAKHQVLLISDEIHGDLVLTDEDITPAFTVDWDAKNWVVSLISPSKTFNLAALHAACAII 248 (391)
T ss_dssp SBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCCGGGSCTTTGGGEEEEECSHHHHTCTTTCCEEEEC
T ss_pred CCCCCCcccCHHHHHHHHHHHHHCCCEEEEecccccccCCCCCceehhhcCccccCcEEEEEeChhhccccchhheEEEE
Confidence 656 6666 56889999999999999999998754432211111 111 145 8899999987 4455599999
Q ss_pred e-cchhhhhc
Q 023191 271 R-KGVKEINK 279 (286)
Q Consensus 271 ~-~~~~~~~~ 279 (286)
+ +++.+..+
T Consensus 249 ~~~~~~~~~~ 258 (391)
T 3dzz_A 249 PNPDLRARAE 258 (391)
T ss_dssp CSHHHHHHHH
T ss_pred CCHHHHHHHH
Confidence 7 66665554
No 54
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=99.88 E-value=6.5e-22 Score=179.12 Aligned_cols=216 Identities=11% Similarity=0.029 Sum_probs=155.8
Q ss_pred CceecCCCC---CCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-
Q 023191 48 GLELIPSEN---FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP- 123 (286)
Q Consensus 48 ~i~L~~~e~---~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~- 123 (286)
.|+|..++. ++++.+++++.+.+.+....+ |+...+..++++++++++++++|.+.+. ..+|++++|++
T Consensus 41 ~id~~~g~~~~~~~~~~v~~a~~~~~~~~~~~~------y~~~~g~~~l~~~l~~~l~~~~g~~~~~-~~~i~~~~g~~~ 113 (407)
T 3nra_A 41 PVDFSHGDVDAHEPTPGAFDLFSAGVQSGGVQA------YTEYRGDLGIRDLLAPRLAAFTGAPVDA-RDGLIITPGTQG 113 (407)
T ss_dssp CEETTSCCTTTSCCCTTHHHHHHHHHHHTHHHH------SCCTTCCHHHHHHHHHHHHHHHTSCCCT-TTSEEEESHHHH
T ss_pred eeeecCcCCCCCCCcHHHHHHHHHHHhcCCCCC------cCCCCCCHHHHHHHHHHHHHHhCCCCCC-CCcEEEeCCcHH
Confidence 588877543 468899999988876421101 2333456788999999999999984210 01499999998
Q ss_pred HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEeccc---CCCCCCCCHHHHHHHhhhcCCcEEE
Q 023191 124 SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRL---NESTGYIDYDQLEKSATLFRPKLIV 200 (286)
Q Consensus 124 a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~---~~~~~~~d~e~l~~~i~~~~tk~v~ 200 (286)
++..++.+++++||+|+++.+.|.++. ..+...|.+++.+++.. +.+++.+|++++++.+++ ++++|+
T Consensus 114 a~~~~~~~l~~~gd~vl~~~~~~~~~~--------~~~~~~g~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~v~ 184 (407)
T 3nra_A 114 ALFLAVAATVARGDKVAIVQPDYFANR--------KLVEFFEGEMVPVQLDYVSADETRAGLDLTGLEEAFKA-GARVFL 184 (407)
T ss_dssp HHHHHHHTTCCTTCEEEEEESCCTHHH--------HHHHHTTCEEEEEEBCCCSSCCSSCCBCHHHHHHHHHT-TCCEEE
T ss_pred HHHHHHHHhCCCCCEEEEcCCcccchH--------HHHHHcCCEEEEeecccccccCcCCCcCHHHHHHHHhh-CCcEEE
Confidence 888788999999999999996666543 24456676666665421 125678999999999988 899988
Q ss_pred Ec-CCC-CCCccC---HHHHHHHHHhcCCEEEEeccccccccccCCCCC------CCCcceEEEeCCCCCCC--CCCceE
Q 023191 201 AG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVIPS------PFEYADVVTTTTHKSLR--GPRGAM 267 (286)
Q Consensus 201 i~-~~n-~g~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~------~~~~~D~v~~s~~K~l~--gp~gG~ 267 (286)
++ ++| +|...+ +++|+++|++||+++|+|++|+.+......... .....++++.|++|+|+ |.+.|+
T Consensus 185 ~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~ 264 (407)
T 3nra_A 185 FSNPNNPAGVVYSAEEIGQIAALAARYGATVIADQLYSRLRYAGASYTHLRAEAAVDAENVVTIMGPSKTESLSGYRLGV 264 (407)
T ss_dssp EESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCTTCCCCCGGGCTTSCGGGEEEEECSSSTTCCGGGCCEE
T ss_pred EcCCCCCCCcccCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCChhhcCcccCCcEEEEeCcccccCCCeeeEEE
Confidence 87 766 677777 899999999999999999998765433211110 01136689999999985 344599
Q ss_pred EEEecchhhhhc
Q 023191 268 IFFRKGVKEINK 279 (286)
Q Consensus 268 l~~~~~~~~~~~ 279 (286)
+++++++.+..+
T Consensus 265 ~~~~~~~~~~l~ 276 (407)
T 3nra_A 265 AFGSRAIIARME 276 (407)
T ss_dssp EEECHHHHHHHH
T ss_pred EEcCHHHHHHHH
Confidence 999888776554
No 55
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=99.88 E-value=1.9e-22 Score=185.74 Aligned_cols=233 Identities=11% Similarity=0.129 Sum_probs=166.1
Q ss_pred cChHHHHHHHHHHH--------HHHcCceecCCCC--CCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHH
Q 023191 30 VDPEIADIIEHEKA--------RQWKGLELIPSEN--FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQK 99 (286)
Q Consensus 30 ~~~~~~~~~~~~~~--------~~~~~i~L~~~e~--~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 99 (286)
+++..+..+.+... ...+.|+|..+++ .+|+.+.+++.+.+.... ...|+...+..++++++.+
T Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~------~~~Y~~~~g~~~lr~~ia~ 106 (447)
T 3b46_A 33 TAKDVWSLTNEAAAKAANNSKNQGRELINLGQGFFSYSPPQFAIKEAQKALDIPM------VNQYSPTRGRPSLINSLIK 106 (447)
T ss_dssp CCCCHHHHHHHHHHHHCCC---TTSCCEECCCCSCSSCCCHHHHHHHHHHTTSGG------GGSCCCTTCCHHHHHHHHH
T ss_pred cCccHHHHHHHHHHhhccchhccCCCeEEccCCCCCCCCCHHHHHHHHHHHhCcC------CCCCCCCCCCHHHHHHHHH
Confidence 56667777766542 2246799988876 368999999988775411 1123444567789999999
Q ss_pred HHHHHCCCCCCCcceeEEeCCChH-HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCC-
Q 023191 100 RALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNE- 177 (286)
Q Consensus 100 ~~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~- 177 (286)
++.+.+|.+.+. .+|++|+|++ ++.+++.++++|||+|+++++.|.++. ..+...|..++.+++..+.
T Consensus 107 ~l~~~~g~~~~~--~~v~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~--------~~~~~~g~~~~~v~~~~~~~ 176 (447)
T 3b46_A 107 LYSPIYNTELKA--ENVTVTTGANEGILSCLMGLLNAGDEVIVFEPFFDQYI--------PNIELCGGKVVYVPINPPKE 176 (447)
T ss_dssp HHTTTTTSCCCG--GGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHH--------HHHHHTTCEEEEEEEECCGG
T ss_pred HHHHhcCCCCCh--hhEEEeCCHHHHHHHHHHHHcCCCCEEEEeCCCchhHH--------HHHHHcCCEEEEEeCCCccc
Confidence 998888864322 3599999988 888899999999999999996665543 2445667666666543210
Q ss_pred --------CCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCcc---CHHHHHHHHHhcCCEEEEeccccccccccCCCC-
Q 023191 178 --------STGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLY---DYERIRKVCNKQKAIMLADMAHISGLVAAGVIP- 243 (286)
Q Consensus 178 --------~~~~~d~e~l~~~i~~~~tk~v~i~-~~n-~g~~~---~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~- 243 (286)
.++.+|+++|++.+++ ++++|+++ ++| +|... ++++|+++|++||+++|+|++|...........
T Consensus 177 ~~~~~~~~~~~~~d~~~l~~~l~~-~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~~~~~ 255 (447)
T 3b46_A 177 LDQRNTRGEEWTIDFEQFEKAITS-KTKAVIINTPHNPIGKVFTREELTTLGNICVKHNVVIISDEVYEHLYFTDSFTRI 255 (447)
T ss_dssp GGTSCBCSTTSEECHHHHHTTCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCG
T ss_pred cccccccccCcccCHHHHHHhhcc-CCeEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCcEEEEeccchhcccCCCCcCH
Confidence 1468999999999986 89999987 666 66554 588999999999999999999875333211000
Q ss_pred CCC----CcceEEEeCCCCCCC--CCCceEEEE-ecchhhhhc
Q 023191 244 SPF----EYADVVTTTTHKSLR--GPRGAMIFF-RKGVKEINK 279 (286)
Q Consensus 244 ~~~----~~~D~v~~s~~K~l~--gp~gG~l~~-~~~~~~~~~ 279 (286)
..+ .+.|+++.|+||+|+ |.+.|++++ ++++.+..+
T Consensus 256 ~~~~~~~~~~~i~i~S~sK~~~~~G~riG~~~~~~~~l~~~l~ 298 (447)
T 3b46_A 256 ATLSPEIGQLTLTVGSAGKSFAATGWRIGWVLSLNAELLSYAA 298 (447)
T ss_dssp GGSCHHHHTTEEEEEEHHHHTTCTTSCCEEEECSCHHHHHHHH
T ss_pred HHcCCCCCCcEEEEecCchhcCCcchhhEEEEeCCHHHHHHHH
Confidence 011 147899999999885 455699999 777766554
No 56
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=99.87 E-value=1.6e-22 Score=184.29 Aligned_cols=241 Identities=11% Similarity=0.029 Sum_probs=170.5
Q ss_pred ccccccccChHHHHHHHHHHHHHHcCceecCCCCC--CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHH
Q 023191 23 LNAPLEVVDPEIADIIEHEKARQWKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKR 100 (286)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~L~~~e~~--~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 100 (286)
+++++..++++.+..+.+.. ...+.|+|..+++. +++.+++++.+.+.... ....|+...+..++++++.++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~-~~~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~-----~~~~y~~~~g~~~lr~~la~~ 79 (422)
T 3fvs_A 6 QARRLDGIDYNPWVEFVKLA-SEHDVVNLGQGFPDFPPPDFAVEAFQHAVSGDF-----MLNQYTKTFGYPPLTKILASF 79 (422)
T ss_dssp SCGGGTTCCCCHHHHHHHHH-HTSCCEECCCSSCSSCCCHHHHHHHHHHHHSCG-----GGGSCCCTTCCHHHHHHHHHH
T ss_pred HHHHhhccCccHHHHHHHHh-hcCCceEeCCCCCCCCCCHHHHHHHHHHHhCCC-----ccCCCCCCCCCHHHHHHHHHH
Confidence 35566667777777766543 34578999988873 68999999988876521 011233345567899999999
Q ss_pred HHHHCCCCCCCcceeEEeCCChH-HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEeccc----
Q 023191 101 ALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRL---- 175 (286)
Q Consensus 101 ~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~---- 175 (286)
+.+.+|.+.+. ..+|++|+|++ ++..++.+++++||+|+++.+.|.++. ..+...|.+++.+++..
T Consensus 80 ~~~~~g~~~~~-~~~i~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~--------~~~~~~g~~~~~~~~~~~~~~ 150 (422)
T 3fvs_A 80 FGELLGQEIDP-LRNVLVTVGGYGALFTAFQALVDEGDEVIIIEPFFDCYE--------PMTMMAGGRPVFVSLKPGPIQ 150 (422)
T ss_dssp HHHHHTCCCCH-HHHEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHH--------HHHHHTTCEEEEEECBCCCCC
T ss_pred HHHhhCCCCCC-CCcEEEECChHHHHHHHHHHHcCCCCEEEEcCCCchhhH--------HHHHHcCCEEEEEeccccccc
Confidence 99988875321 01599999999 888789999999999999996665543 23445666666666432
Q ss_pred C-----CCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCcc---CHHHHHHHHHhcCCEEEEeccccccccccCCC---
Q 023191 176 N-----ESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLY---DYERIRKVCNKQKAIMLADMAHISGLVAAGVI--- 242 (286)
Q Consensus 176 ~-----~~~~~~d~e~l~~~i~~~~tk~v~i~-~~n-~g~~~---~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~--- 242 (286)
+ .+++.+|++++++.+++ ++++|+++ ++| +|... ++++|+++|++||+++|+|++|+.........
T Consensus 151 ~G~~~~~~~~~~d~~~l~~~~~~-~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~ 229 (422)
T 3fvs_A 151 NGELGSSSNWQLDPMELAGKFTS-RTKALVLNTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISI 229 (422)
T ss_dssp SSSCCBGGGSBCCHHHHHTTCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCG
T ss_pred ccccccccCCCCCHHHHHhhcCC-CceEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCCh
Confidence 0 12467999999999987 89999987 666 67666 58999999999999999999987533221111
Q ss_pred -CCCC-CcceEEEeCCCCCCC--CCCceEEEEecchhhhhc
Q 023191 243 -PSPF-EYADVVTTTTHKSLR--GPRGAMIFFRKGVKEINK 279 (286)
Q Consensus 243 -~~~~-~~~D~v~~s~~K~l~--gp~gG~l~~~~~~~~~~~ 279 (286)
...- .+.++++.|++|+|+ |.+.|++++++++.+..+
T Consensus 230 ~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~~~~~~~~ 270 (422)
T 3fvs_A 230 ASLPGMWERTLTIGSAGKTFSATGWKVGWVLGPDHIMKHLR 270 (422)
T ss_dssp GGSTTTGGGEEEEEEHHHHHTCGGGCCEEEECCHHHHHHHH
T ss_pred hhcccccCcEEEEecchhccCCccceEEEEEeCHHHHHHHH
Confidence 1110 135688999999884 444599999888766554
No 57
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=99.87 E-value=2.6e-21 Score=178.36 Aligned_cols=197 Identities=11% Similarity=0.041 Sum_probs=146.1
Q ss_pred CCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCC--cceeEEeCCChH-HHHHHHHHhc
Q 023191 57 FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEK--WGVNVQSLSGSP-SNFQVYTALL 133 (286)
Q Consensus 57 ~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~--~~~~v~~~sG~~-a~~~~l~a~~ 133 (286)
++++.+.+++.+++..... + +...++..++++++++++++++|++.+. . ..+++|+|++ ++..++.++.
T Consensus 53 ~~~~~v~e~~~~a~~~~~~-~------~~~~~~~~~l~~~~~~~la~l~g~~~~~~~~-~~~~~t~ggtea~~~al~a~~ 124 (452)
T 2dgk_A 53 WDDENVHKLMDLSINKNWI-D------KEEYPQSAAIDLRCVNMVADLWHAPAPKNGQ-AVGTNTIGSSEACMLGGMAMK 124 (452)
T ss_dssp CCCHHHHHHHHHTTTCBTT-C------TTTCHHHHHHHHHHHHHHHHHTTCCCCTTSC-CEEEEESSHHHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHhccCCC-C------hhhChhHHHHHHHHHHHHHHHhCCCcccccC-CceEEeCCHHHHHHHHHHHHH
Confidence 4578889998887754221 1 2334677899999999999999997631 0 1388889998 8877777775
Q ss_pred C--------CC-----CeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEE
Q 023191 134 K--------PH-----DRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIV 200 (286)
Q Consensus 134 ~--------~G-----d~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~ 200 (286)
+ +| ++|++++ .|.++.. .+...|.+++.++ ++++++.+|+++|++++++ +|++|+
T Consensus 125 ~~~~~~~~~~G~~~~~~~vi~~~-~h~~~~~--------~~~~~G~~v~~v~--~~~~~~~~d~~~l~~~i~~-~t~~v~ 192 (452)
T 2dgk_A 125 WRWRKRMEAAGKPTDKPNLVCGP-VQICWHK--------FARYWDVELREIP--MRPGQLFMDPKRMIEACDE-NTIGVV 192 (452)
T ss_dssp HHHHHHHHHTTCCCSCCEEEESS-CCHHHHH--------HHHHTTCEEEECC--CBTTBCSCCHHHHHHHCCT-TEEEEE
T ss_pred HHHHHHHHhcCCCCCCcEEEECC-CcHHHHH--------HHHHcCceEEEEe--cCCCCCeECHHHHHHHHhh-CCEEEE
Confidence 4 55 5899887 6655433 3446676666665 4433689999999999987 899988
Q ss_pred Ec-CCC-CCCccCHHHHHHHHHhc------CCEEEEeccccccccc--cCCCCC--CCCcceEEEeCCCCCCCCCCc-eE
Q 023191 201 AG-ASA-YARLYDYERIRKVCNKQ------KAIMLADMAHISGLVA--AGVIPS--PFEYADVVTTTTHKSLRGPRG-AM 267 (286)
Q Consensus 201 i~-~~n-~g~~~~l~~I~~ia~~~------~~~vivD~a~~~g~~~--~~~~~~--~~~~~D~v~~s~~K~l~gp~g-G~ 267 (286)
++ ++| +|.+.|+++|+++|+++ ++++++|+||+.+..+ ...... .+.++|++++++|||+.+|.+ |+
T Consensus 193 ~~~~~n~tG~~~~l~~I~~ia~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~hK~~~~~~~~G~ 272 (452)
T 2dgk_A 193 PTFGVTYTGNYEFPQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIVWDFRLPRVKSISASGHKFGLAPLGCGW 272 (452)
T ss_dssp CBBSCTTTCBBCCHHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCSTTSTTEEEEEEETTTTTCCCSSCEE
T ss_pred EEcCCcCCcccCCHHHHHHHHHHHhhccCCCCcEEEEcccHHHHHHhhCccchhhcCCCCCcEEEECcccccCCCCCeEE
Confidence 87 666 78899999999999996 9999999998776542 111111 133699999999999878777 99
Q ss_pred EEEecc
Q 023191 268 IFFRKG 273 (286)
Q Consensus 268 l~~~~~ 273 (286)
++++++
T Consensus 273 ~~~~~~ 278 (452)
T 2dgk_A 273 VIWRDE 278 (452)
T ss_dssp EEESSG
T ss_pred EEEcCH
Confidence 999864
No 58
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=99.87 E-value=1.5e-21 Score=182.80 Aligned_cols=177 Identities=18% Similarity=0.150 Sum_probs=136.9
Q ss_pred cCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-HHHHHHHHhcC--------------CCCeEEeccCCCCc
Q 023191 84 YGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLK--------------PHDRIMALDLPHGG 148 (286)
Q Consensus 84 ~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l~a~~~--------------~Gd~Vl~~~~~~~~ 148 (286)
|.......++|+.+++|+++++|.+.+. ..+++++|++ +++.++.+..+ +++.|++++..|.+
T Consensus 127 ~~~~p~~~~le~~~~~~l~~~~g~~~~~--~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~G~~~~~~~~v~~s~~~H~s 204 (511)
T 3vp6_A 127 YEIAPVFVLMEQITLKKMREIVGWSSKD--GDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSHYS 204 (511)
T ss_dssp TTTCHHHHHHHHHHHHHHHHHHTCCSSS--CEEEEESSHHHHHHHHHHHHHHHHCTHHHHHCGGGSCCEEEEEETTSCTH
T ss_pred cccCchHHHHHHHHHHHHHHHhCCCCCC--CceEECCchHHHHHHHHHHHHHHhhhhhhhcCcccCCCeEEEECCCchHH
Confidence 3455778899999999999999997432 2588888888 77766666643 67889999977776
Q ss_pred ccCcccccccccccccee---eeEEEecccCCCCCCCCHHHHHHHhhhcC-----CcEEEEc-CCC-CCCccCHHHHHHH
Q 023191 149 HLSHGYQTDTKKISAVSI---FFETMPYRLNESTGYIDYDQLEKSATLFR-----PKLIVAG-ASA-YARLYDYERIRKV 218 (286)
Q Consensus 149 ~~~~~~~~~~~~~~~~g~---~~~~v~~~~~~~~~~~d~e~l~~~i~~~~-----tk~v~i~-~~n-~g~~~~l~~I~~i 218 (286)
+.. .+...|. .++.++ .+ +++.+|+++|++++++.+ |++|+++ ++| +|.+.|+++|+++
T Consensus 205 ~~~--------~~~~~g~g~~~~~~v~--~d-~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~~~~G~vd~l~~I~~i 273 (511)
T 3vp6_A 205 IKK--------AGAALGFGTDNVILIK--CN-ERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDPIQEIADI 273 (511)
T ss_dssp HHH--------HHHHTTSCGGGEEEEC--BC-TTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCSSSCCBCCHHHHHHH
T ss_pred HHH--------HHHHcCCCCCcEEEee--cC-CCCccCHHHHHHHHHHHHhcCCCcEEEEEecCCCCCcccccHHHHHHH
Confidence 643 3344554 455565 44 568999999999997621 7888887 666 7899999999999
Q ss_pred HHhcCCEEEEeccccccccccCCCCC---CCCcceEEEeCCCCCCCCCCc-eEEEEecc
Q 023191 219 CNKQKAIMLADMAHISGLVAAGVIPS---PFEYADVVTTTTHKSLRGPRG-AMIFFRKG 273 (286)
Q Consensus 219 a~~~~~~vivD~a~~~g~~~~~~~~~---~~~~~D~v~~s~~K~l~gp~g-G~l~~~~~ 273 (286)
|++||+++++|+||+.+......... ++.++|++++++||||++|.| |+++++++
T Consensus 274 a~~~~~~lhvD~a~~~~~~~~~~~~~~~~g~~~aDsv~~~~hK~l~~p~g~g~l~~~~~ 332 (511)
T 3vp6_A 274 CEKYNLWLHVDAAWGGGLLMSRKHRHKLNGIERANSVTWNPHKMMGVLLQCSAILVKEK 332 (511)
T ss_dssp HHHHTCEEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCSCCEEEEESST
T ss_pred HHHcCCEEEEEccchhhHhhChhhhhhccCCccCCEEEECcccccCCCcCeEEEEEeCH
Confidence 99999999999999988775432222 223589999999999999988 99999875
No 59
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.87 E-value=7.6e-22 Score=179.38 Aligned_cols=213 Identities=13% Similarity=0.062 Sum_probs=152.4
Q ss_pred HcCceecCCCCC--CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH
Q 023191 46 WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP 123 (286)
Q Consensus 46 ~~~i~L~~~e~~--~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~ 123 (286)
.+.++|..+++. +++.+++++ +.+.+.. .+ |+...+..++++++.+++.+.+|.+.+. .+|++|+|++
T Consensus 43 ~~~i~l~~~~~~~~~~~~v~~a~-~~l~~~~-~~------y~~~~g~~~l~~~la~~~~~~~g~~~~~--~~v~~~~g~t 112 (409)
T 2gb3_A 43 VRIHHLNIGQPDLKTPEVFFERI-YENKPEV-VY------YSHSAGIWELREAFASYYKRRQRVDVKP--ENVLVTNGGS 112 (409)
T ss_dssp CEEEECSSCCCCSCCCTHHHHHH-HHTCCSS-CC------CCCTTCCHHHHHHHHHHHHHTSCCCCCG--GGEEEESHHH
T ss_pred CCEEeccCCCCCCCCCHHHHHHH-HHHhcCC-CC------CCCCCCcHHHHHHHHHHHHHHhCCCCCH--HHEEEeCCHH
Confidence 357899888773 578899999 8775421 12 3334556789999999998888764322 3599999988
Q ss_pred -HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc
Q 023191 124 -SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG 202 (286)
Q Consensus 124 -a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~ 202 (286)
++.+++.+++++||+|+++++.|.++.. .+...|.+++.++++.+ +++.+ +++|++++++ ++++|+++
T Consensus 113 ~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~--------~~~~~g~~~~~v~~~~~-~~~~~-~~~l~~~l~~-~~~~v~~~ 181 (409)
T 2gb3_A 113 EAILFSFAVIANPGDEILVLEPFYANYNA--------FAKIAGVKLIPVTRRME-EGFAI-PQNLESFINE-RTKGIVLS 181 (409)
T ss_dssp HHHHHHHHHHCCTTCEEEEEESCCTHHHH--------HHHHHTCEEEEEECCGG-GTSCC-CTTGGGGCCT-TEEEEEEE
T ss_pred HHHHHHHHHhCCCCCEEEEcCCCchhHHH--------HHHHcCCEEEEeccCCC-CCCcc-HHHHHHhhCc-CCeEEEEC
Confidence 8888999999999999999977665532 34456666655653311 24455 8889988877 88998887
Q ss_pred -CCC-CCCcc---CHHHHHHHHHhcCCEEEEeccccccccccCCCCC--CCCcceEEEeCCCCCCCCC--CceEEEEec-
Q 023191 203 -ASA-YARLY---DYERIRKVCNKQKAIMLADMAHISGLVAAGVIPS--PFEYADVVTTTTHKSLRGP--RGAMIFFRK- 272 (286)
Q Consensus 203 -~~n-~g~~~---~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~--~~~~~D~v~~s~~K~l~gp--~gG~l~~~~- 272 (286)
++| +|... ++++|+++|++||+++|+|++|+.+......... .+.+.|++++|+||+|+.| +.|++++++
T Consensus 182 ~p~nptG~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~ 261 (409)
T 2gb3_A 182 NPCNPTGVVYGKDEMRYLVEIAERHGLFLIVDEVYSEIVFRGEFASALSIESDKVVVIDSVSKKFSACGARVGCLITRNE 261 (409)
T ss_dssp SSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCGGGSCCTTEEEEEESTTTTTCGGGCCEEEECSCH
T ss_pred CCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEECcccccccCCCCCCccccCCCCEEEEecchhccCCccceEEEEEECcH
Confidence 666 66554 4889999999999999999998865442211110 1124799999999998533 359999998
Q ss_pred chhhhhc
Q 023191 273 GVKEINK 279 (286)
Q Consensus 273 ~~~~~~~ 279 (286)
++.+..+
T Consensus 262 ~l~~~l~ 268 (409)
T 2gb3_A 262 ELISHAM 268 (409)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7765544
No 60
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=99.87 E-value=1.4e-21 Score=173.69 Aligned_cols=206 Identities=17% Similarity=0.205 Sum_probs=150.1
Q ss_pred cCceecCCCC-CCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-H
Q 023191 47 KGLELIPSEN-FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-S 124 (286)
Q Consensus 47 ~~i~L~~~e~-~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a 124 (286)
..+.|+.+.+ ++++.+++++.+.+.. |..+ .+..++++++++++++++|.+++ +|++++|++ +
T Consensus 14 ~~i~l~~~~~~~~~~~v~~a~~~~~~~-~~~~----------~g~~~~~~~~~~~l~~~~g~~~~----~v~~~~g~t~a 78 (359)
T 1svv_A 14 KPYSFVNDYSVGMHPKILDLMARDNMT-QHAG----------YGQDSHCAKAARLIGELLERPDA----DVHFISGGTQT 78 (359)
T ss_dssp -CEECSCSCSSCCCHHHHHHHHHHTTC-CCCS----------TTCSHHHHHHHHHHHHHHTCTTS----EEEEESCHHHH
T ss_pred eeEEecCCCcCCCCHHHHHHHHHHHhh-cccc----------ccccHHHHHHHHHHHHHhCCCCc----cEEEeCCchHH
Confidence 4678876555 5789999999987753 3111 22346777888999999998764 599999999 8
Q ss_pred HHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhc------CCcE
Q 023191 125 NFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF------RPKL 198 (286)
Q Consensus 125 ~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~------~tk~ 198 (286)
+..++.+++++||+|+++++.|.++.... .+...|.+++.++ .+ ++.+|+++|++.+++. ++++
T Consensus 79 ~~~~~~~~~~~gd~vl~~~~~~~~~~~~~------~~~~~g~~~~~v~--~~--~~~~d~~~l~~~l~~~~~~~~~~~~~ 148 (359)
T 1svv_A 79 NLIACSLALRPWEAVIATQLGHISTHETG------AIEATGHKVVTAP--CP--DGKLRVADIESALHENRSEHMVIPKL 148 (359)
T ss_dssp HHHHHHHHCCTTEEEEEETTSHHHHSSTT------HHHHTTCCEEEEC--CT--TSCCCHHHHHHHHHHSCSTTSCEEEE
T ss_pred HHHHHHHHhCCCCEEEEcccchHHHHHHH------HHhcCCCeeEEEe--CC--CCeecHHHHHHHHHHHHhccCCCceE
Confidence 88899999999999999997777665420 1334565565555 33 5789999999999873 2889
Q ss_pred EEEcCCC-CCCccC---HHHHHHHHHhcCCEEEEeccc---cccccccCCCCCCC-CcceEEEeCCCCCCCCCCc-eEEE
Q 023191 199 IVAGASA-YARLYD---YERIRKVCNKQKAIMLADMAH---ISGLVAAGVIPSPF-EYADVVTTTTHKSLRGPRG-AMIF 269 (286)
Q Consensus 199 v~i~~~n-~g~~~~---l~~I~~ia~~~~~~vivD~a~---~~g~~~~~~~~~~~-~~~D~v~~s~~K~l~gp~g-G~l~ 269 (286)
|+++++| +|...+ +++|.++|++||+++|+|++| ..|....+.....+ ..+|++++++||+ ++|.| |+++
T Consensus 149 v~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~-g~~~~~g~l~ 227 (359)
T 1svv_A 149 VYISNTTEVGTQYTKQELEDISASCKEHGLYLFLDGARLASALSSPVNDLTLADIARLTDMFYIGATKA-GGMFGEALII 227 (359)
T ss_dssp EEEESSCTTSCCCCHHHHHHHHHHHHHHTCEEEEECTTHHHHHTSTTCCCCHHHHHHHCSEEEEECTTT-TCSSCEEEEE
T ss_pred EEEEcCCCCceecCHHHHHHHHHHHHHhCCEEEEEccchhhhhcCCCcchhhhhhhhcCCEEEEecccC-CCCCceEEEE
Confidence 9887335 677777 889999999999999999998 43433221111000 1479999999996 67888 9999
Q ss_pred Eecchhhhh
Q 023191 270 FRKGVKEIN 278 (286)
Q Consensus 270 ~~~~~~~~~ 278 (286)
+++++.+..
T Consensus 228 ~~~~~~~~~ 236 (359)
T 1svv_A 228 LNDALKPNA 236 (359)
T ss_dssp CSGGGCTTH
T ss_pred EcccHHHHH
Confidence 988775544
No 61
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=99.87 E-value=2.4e-22 Score=179.59 Aligned_cols=205 Identities=11% Similarity=0.015 Sum_probs=149.2
Q ss_pred HcCceecCCCCC--CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH
Q 023191 46 WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP 123 (286)
Q Consensus 46 ~~~i~L~~~e~~--~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~ 123 (286)
.+.|+|..++++ +++.+++++.+.+.... +|+. ..+ .+++ +.+++++|++++ +|++|+|++
T Consensus 30 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~--~y~~------~~~-~~lr----~~la~~~~~~~~----~v~~~~g~~ 92 (365)
T 3get_A 30 KEVIKLASNENPFGTPPKAIECLRQNANKAH--LYPD------DSM-IELK----STLAQKYKVQNE----NIIIGAGSD 92 (365)
T ss_dssp SCCEECSSCCCTTCSCHHHHHHHHHHGGGTT--SCCC------TTC-HHHH----HHHHHHHTCCGG----GEEEESSHH
T ss_pred CceEEecCCCCCCCCCHHHHHHHHHHHHhhc--cCCC------CCh-HHHH----HHHHHHhCCCcc----eEEECCCHH
Confidence 367999988885 68999999998876422 3332 122 3444 777778888764 599999999
Q ss_pred -HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc
Q 023191 124 -SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG 202 (286)
Q Consensus 124 -a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~ 202 (286)
++.+++.+++++||+|+++.+.|.++. ..+...|.+++.+++ +.+++ +|++++++++++ ++++|+++
T Consensus 93 ~a~~~~~~~l~~~gd~vl~~~~~~~~~~--------~~~~~~g~~~~~v~~--~~~~~-~d~~~l~~~l~~-~~~~v~~~ 160 (365)
T 3get_A 93 QVIEFAIHSKLNSKNAFLQAGVTFAMYE--------IYAKQCGAKCYKTQS--ITHNL-DEFKKLYETHKD-EIKLIFLC 160 (365)
T ss_dssp HHHHHHHHHHCCTTCEEEECSSCCTHHH--------HHHHHHTCEEEECSS--SSCCH-HHHHHHHHHTTT-TEEEEEEE
T ss_pred HHHHHHHHHHhCCCCEEEEeCCChHHHH--------HHHHHcCCEEEEEec--CCCCC-CCHHHHHHHhCC-CCCEEEEc
Confidence 888789999999999999996655443 244566766655553 23567 999999999986 89999997
Q ss_pred -CCC-CCCccCHHHHHHHHH--hcCCEEEEecccccccc--ccCCCCCCC-----CcceEEEeCCCCCCC--CCCceEEE
Q 023191 203 -ASA-YARLYDYERIRKVCN--KQKAIMLADMAHISGLV--AAGVIPSPF-----EYADVVTTTTHKSLR--GPRGAMIF 269 (286)
Q Consensus 203 -~~n-~g~~~~l~~I~~ia~--~~~~~vivD~a~~~g~~--~~~~~~~~~-----~~~D~v~~s~~K~l~--gp~gG~l~ 269 (286)
++| +|...+.+++.++++ ++|+++|+|++|+.... ........+ ...++++.|+||+++ |.+.|+++
T Consensus 161 ~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~ 240 (365)
T 3get_A 161 LPNNPLGECLDASEATEFIKGVNEDCLVVIDAAYNEFASFKDSKKHLEPCELIKEFDNVLYLGTFSKLYGLGGLRIGYGI 240 (365)
T ss_dssp SSCTTTCCCCCHHHHHHHHHTSCTTSEEEEECTTHHHHHHHCGGGCCCHHHHHHHCTTEEEEEESSSTTSCTTTCCEEEE
T ss_pred CCCCCCCCCcCHHHHHHHHHhCCCCcEEEEeCccHHHhcccCCcccccHhHHhccCCCEEEEeecchHhcCcchheEEEE
Confidence 777 788889888888888 77999999999875442 211111111 125688999999974 44559999
Q ss_pred Eecchhhhhc
Q 023191 270 FRKGVKEINK 279 (286)
Q Consensus 270 ~~~~~~~~~~ 279 (286)
+++++.+..+
T Consensus 241 ~~~~~~~~~~ 250 (365)
T 3get_A 241 ANANIISAFY 250 (365)
T ss_dssp ECHHHHHHHH
T ss_pred cCHHHHHHHH
Confidence 9887776554
No 62
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=99.87 E-value=1.5e-21 Score=173.69 Aligned_cols=205 Identities=11% Similarity=0.053 Sum_probs=150.2
Q ss_pred cCceecCCCCC--CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-
Q 023191 47 KGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP- 123 (286)
Q Consensus 47 ~~i~L~~~e~~--~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~- 123 (286)
+.++|..++++ +++.+++++.+.+.+.. +|+ ..+.. .+++.+++++|++++ +|++++|++
T Consensus 17 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~--~y~-------~~~~~----~l~~~la~~~~~~~~----~i~~~~g~~~ 79 (354)
T 3ly1_A 17 NPIRINFNENPLGMSPKAQAAARDAVVKAN--RYA-------KNEIL----MLGNKLAAHHQVEAP----SILLTAGSSE 79 (354)
T ss_dssp SCEECSSCCCSSCCCHHHHHHHHHTGGGTT--SCC-------HHHHH----HHHHHHHHHTTSCGG----GEEEESHHHH
T ss_pred ceEEccCCCCCCCCCHHHHHHHHHHHhhCc--CCC-------CCchH----HHHHHHHHHhCCChH----HEEEeCChHH
Confidence 56899988884 68999999998876421 232 12333 455888888998764 499999998
Q ss_pred HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhh-cCCcEEEEc
Q 023191 124 SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATL-FRPKLIVAG 202 (286)
Q Consensus 124 a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~-~~tk~v~i~ 202 (286)
++.+++.+++++||+|+++.+.|.++. ..+...|.+++.++ .+ +++.+|++++++.+++ .++++|+++
T Consensus 80 a~~~~~~~l~~~gd~vl~~~~~~~~~~--------~~~~~~g~~~~~~~--~~-~~~~~d~~~l~~~l~~~~~~~~v~l~ 148 (354)
T 3ly1_A 80 GIRAAIEAYASLEAQLVIPELTYGDGE--------HFAKIAGMKVTKVK--ML-DNWAFDIEGLKAAVAAYSGPSIVYLV 148 (354)
T ss_dssp HHHHHHHHHCCTTCEEEEESSSCTHHH--------HHHHHTTCEEEEEC--CC-TTSCCCHHHHHHHHHTCSSCEEEEEE
T ss_pred HHHHHHHHHhCCCCeEEECCCCchHHH--------HHHHHcCCEEEEec--CC-CCCCCCHHHHHHHhccCCCCCEEEEe
Confidence 888789999999999999996665543 24445676665554 44 4689999999999983 389999997
Q ss_pred -CCC-CCCccCHHHHHHHHHh--cCCEEEEeccccccccccCCCCCCC-----C-cceEEEeCCCCCCC--CCCceEEEE
Q 023191 203 -ASA-YARLYDYERIRKVCNK--QKAIMLADMAHISGLVAAGVIPSPF-----E-YADVVTTTTHKSLR--GPRGAMIFF 270 (286)
Q Consensus 203 -~~n-~g~~~~l~~I~~ia~~--~~~~vivD~a~~~g~~~~~~~~~~~-----~-~~D~v~~s~~K~l~--gp~gG~l~~ 270 (286)
++| +|...+.+++.++++. ||+++|+|++|+..... +.....+ . +.++++.|+||+++ |.+.|++++
T Consensus 149 ~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~ 227 (354)
T 3ly1_A 149 NPNNPTGTITPADVIEPWIASKPANTMFIVDEAYAEFVND-PRFRSISPMITQGAENIILLKTFSKIHAMAGMRVGYAVA 227 (354)
T ss_dssp SSCTTTCCCCCHHHHHHHHHTCCTTEEEEEECTTGGGCCC-TTCCCSHHHHHTTCSSEEEEEESSSTTCCGGGCCEEEEC
T ss_pred CCCCCcCCCcCHHHHHHHHHhCCCCeEEEEeccHHHhccc-cccCCHHHHhhhcCCCEEEEeeChhhccChhhhheeeec
Confidence 666 7788888888888877 99999999998744332 1111111 0 25688999999984 334499999
Q ss_pred ecchhhhhcc
Q 023191 271 RKGVKEINKQ 280 (286)
Q Consensus 271 ~~~~~~~~~~ 280 (286)
++++.+..++
T Consensus 228 ~~~~~~~~~~ 237 (354)
T 3ly1_A 228 HPTVIALMGR 237 (354)
T ss_dssp CHHHHHHHGG
T ss_pred CHHHHHHHHH
Confidence 8887766654
No 63
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=99.87 E-value=8.2e-22 Score=180.09 Aligned_cols=173 Identities=14% Similarity=0.130 Sum_probs=126.9
Q ss_pred HHHHHHHHHCCCCCCCcceeEE---eCCChHHHHHHHHHhcCCCCeEEecc-CCCCcccCccc--ccc-ccccccceeee
Q 023191 96 LCQKRALEAFRLDPEKWGVNVQ---SLSGSPSNFQVYTALLKPHDRIMALD-LPHGGHLSHGY--QTD-TKKISAVSIFF 168 (286)
Q Consensus 96 ~~~~~~~~~~g~~~~~~~~~v~---~~sG~~a~~~~l~a~~~~Gd~Vl~~~-~~~~~~~~~~~--~~~-~~~~~~~g~~~ 168 (286)
.+++.+++++|.+. .++ +++|+.++.+++.++++|||+|++.+ +.|+++....- ... ...+...|.++
T Consensus 77 ~Le~~lA~l~g~e~-----alv~p~~~sGt~Ai~~al~all~pGD~Vl~~~~~~y~~~~~~~g~~~~~~~~~l~~~G~~~ 151 (427)
T 3i16_A 77 SLDAVYARVFNTES-----ALVRPHFVNGTHALGAALFGNLRPGNTMLSVCGEPYDTLHDVIGITENSNMGSLKEFGINY 151 (427)
T ss_dssp HHHHHHHHHHTCSE-----EEEETTCCSHHHHHHHHHHHHCCTTCEEEESSSSCCGGGHHHHTCSCCCSSCCTGGGTCEE
T ss_pred HHHHHHHHHhCCcc-----eEEeCCCccHHHHHHHHHHHHhCCCCEEEEeCCCccHHHHHHHhccccchHHHHHHcCCEE
Confidence 34478999999875 355 56676688889999999999999998 77776542110 000 01223346555
Q ss_pred EEEecccCCCCCCCCHHHHHHHhhh-cCCcEEEEcC----CC--CCCccCHHHHHHHHHh--cCCEEEEecccccccccc
Q 023191 169 ETMPYRLNESTGYIDYDQLEKSATL-FRPKLIVAGA----SA--YARLYDYERIRKVCNK--QKAIMLADMAHISGLVAA 239 (286)
Q Consensus 169 ~~v~~~~~~~~~~~d~e~l~~~i~~-~~tk~v~i~~----~n--~g~~~~l~~I~~ia~~--~~~~vivD~a~~~g~~~~ 239 (286)
+.++ .+ +++.+|++++++++++ .+||+|+++. ++ +|.+.++++|+++|++ +|+++++|++|+.+....
T Consensus 152 ~~v~--~~-~~g~~D~e~l~~~l~~~~~tklV~i~~s~~~p~nptg~i~dl~~i~~la~~~~~g~~livD~a~~~~~~~~ 228 (427)
T 3i16_A 152 KQVD--LK-EDGKPNLEEIEKVLKEDESITLVHIQRSTGYGWRRALLIEDIKSIVDCVKNIRKDIICFVDNCYGEFMDTK 228 (427)
T ss_dssp EECC--CC-TTSSCCHHHHHHHHHTCTTEEEEEEECSCCSSSSCCCCHHHHHHHHHHHHHHCTTSEEEEECTTTTTSSSS
T ss_pred EEec--Cc-cCCCcCHHHHHHHhhCCCCCEEEEEEcCCCCCCCCcccHHHHHHHHHHHHHhCCCCEEEEECCCccccccC
Confidence 4444 44 4578999999999982 2899999964 44 4578899999999999 999999999987665321
Q ss_pred CCCCCCCC-cceEEEeCCCCCCCC---CCceEEEEecchhhhhcc
Q 023191 240 GVIPSPFE-YADVVTTTTHKSLRG---PRGAMIFFRKGVKEINKQ 280 (286)
Q Consensus 240 ~~~~~~~~-~~D~v~~s~~K~l~g---p~gG~l~~~~~~~~~~~~ 280 (286)
.++. ++|++++|+||+++| +.||++++++++.+..+.
T Consensus 229 ----~p~~~gaDiv~~S~sK~lgg~g~~~gG~i~~~~~li~~l~~ 269 (427)
T 3i16_A 229 ----EPTDVGADLIAGSLIKNIGGGIAPTGGYLAGTKDCIEKTSY 269 (427)
T ss_dssp ----CGGGGTCSEEEEETTSGGGTTTCCSCEEEEECHHHHHHHHH
T ss_pred ----CccccCCeEEEecCcccCCCCCCceEEEEEECHHHHHHHHH
Confidence 1222 589999999999988 788999999888766653
No 64
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=99.87 E-value=1.9e-21 Score=177.82 Aligned_cols=213 Identities=11% Similarity=0.021 Sum_probs=154.9
Q ss_pred HcCceecCCCCC--CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH
Q 023191 46 WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP 123 (286)
Q Consensus 46 ~~~i~L~~~e~~--~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~ 123 (286)
.+.++|..++++ +++.+++++.+.+.+....+| +...+..++++++.+++.+.+|++.+. .+|++|+|++
T Consensus 44 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y------~~~~g~~~lr~~la~~~~~~~g~~~~~--~~i~~t~g~t 115 (437)
T 3g0t_A 44 TKFCRMEMGVPGLPAPQIGIETEIQKLREGVASIY------PNLDGLPELKQEASRFAKLFVNIDIPA--RACVPTVGSM 115 (437)
T ss_dssp CCCEECCCCSCCSCCCHHHHHHHHHHHHHTGGGSC------CCTTCCHHHHHHHHHHHHHHHCCCCCG--GGEEEESHHH
T ss_pred CCEEeccCcCCCCCCCHHHHHHHHHHHhCCcCcCC------CCCCChHHHHHHHHHHHHHhhCCCCCc--ccEEEeCCHH
Confidence 367999988874 589999999888764211123 333456789989999998888864332 3699999999
Q ss_pred -HHHHHHHHhc--CCCC--eEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcE
Q 023191 124 -SNFQVYTALL--KPHD--RIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKL 198 (286)
Q Consensus 124 -a~~~~l~a~~--~~Gd--~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~ 198 (286)
++.+++.+++ ++|| +|+++.+.|.++ ...+...|.+++.++++ ++++.+|+++|++++...++++
T Consensus 116 ~al~~~~~~l~~~~~gd~~~Vl~~~p~~~~~--------~~~~~~~g~~~~~v~~~--~~~~~~d~~~l~~~l~~~~~~~ 185 (437)
T 3g0t_A 116 QGCFVSFLVANRTHKNREYGTLFIDPGFNLN--------KLQCRILGQKFESFDLF--EYRGEKLREKLESYLQTGQFCS 185 (437)
T ss_dssp HHHHHHHHHHTTSCTTCSCCEEEEESCCHHH--------HHHHHHHTCCCEEEEGG--GGCTTHHHHHHHHHHTTTCCCE
T ss_pred HHHHHHHHHHhcCCCCCccEEEEeCCCcHhH--------HHHHHHcCCEEEEEeec--CCCCccCHHHHHHHHhcCCceE
Confidence 8887889998 9999 999999655544 33445667767667643 3567899999999994338999
Q ss_pred EEEc-CCC-CCCccC---HHHHHHHHHhcCCEEEEeccccccccccCCCC-------CCC---CcceEEEeCCCCCCC--
Q 023191 199 IVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVIP-------SPF---EYADVVTTTTHKSLR-- 261 (286)
Q Consensus 199 v~i~-~~n-~g~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~-------~~~---~~~D~v~~s~~K~l~-- 261 (286)
|+++ ++| +|...+ +++|+++|++||+++|+|++|+.......... ..+ .+.++++.|+||+++
T Consensus 186 v~l~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~ 265 (437)
T 3g0t_A 186 IIYSNPNNPTWQCMTDEELRIIGELATKHDVIVIEDLAYFGMDFRKDYSHPGEPLYQPSVANYTDNYILALSSSKAFSYA 265 (437)
T ss_dssp EEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCCTTSCCCSTTSSCCCCCGGGTCSCEEEEEESTTTTSCG
T ss_pred EEEeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchhhcccCCCcCcccccchhhccCCCCCcEEEEEcCccCCCCc
Confidence 9886 766 676665 77789999999999999999875433211100 111 236688999999874
Q ss_pred CCCceEEEEecchhh
Q 023191 262 GPRGAMIFFRKGVKE 276 (286)
Q Consensus 262 gp~gG~l~~~~~~~~ 276 (286)
|.+.|++++++++.+
T Consensus 266 G~r~G~~~~~~~~~~ 280 (437)
T 3g0t_A 266 GQRIGVLMISGKLYE 280 (437)
T ss_dssp GGCCEEEEECHHHHH
T ss_pred cceeEEEEECHHHhh
Confidence 334599999887766
No 65
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=99.87 E-value=2e-22 Score=183.09 Aligned_cols=238 Identities=13% Similarity=0.039 Sum_probs=160.0
Q ss_pred cccccccChHHHHHHHHHHHHH--HcCceecCCCCC--CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHH
Q 023191 24 NAPLEVVDPEIADIIEHEKARQ--WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQK 99 (286)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~--~~~i~L~~~e~~--~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 99 (286)
++++..+.++.+..+.+..... .+.++|..+++. +++.+++++.+.+......+ |+...+..++++++.+
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~g~~~idl~~g~~~~~~~~~v~~a~~~~~~~~~~~~------y~~~~g~~~lr~~ia~ 96 (404)
T 2o1b_A 23 SNKLANIPDSYFGKTMGRKIEHGPLPLINMAVGIPDGPTPQGIIDHFQKALTIPENQK------YGAFHGKEAFKQAIVD 96 (404)
T ss_dssp CHHHHTSCCCTTC-------CCCSSCCEECCCCSCSSCCCHHHHHHHHHHTTCHHHHS------CCCTTCCHHHHHHHHH
T ss_pred hhHhhhCCchHHHHHHHHHHhcCCCCEEecCCcCCCCCCCHHHHHHHHHHHhCCCCCC------CCCCCCCHHHHHHHHH
Confidence 3444445554444444332211 246899888774 57899999988774311111 2333456789988889
Q ss_pred HHHHHCCCCCCCcceeEEeCCChH-HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCC
Q 023191 100 RALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNES 178 (286)
Q Consensus 100 ~~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~ 178 (286)
++++.+|++.+. ..+|++|+|++ ++.+++.+++++||+|+++++.|.++.. .+...|.+++.++ .+.+
T Consensus 97 ~~~~~~g~~~~~-~~~v~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~--------~~~~~g~~~~~v~--~~~~ 165 (404)
T 2o1b_A 97 FYQRQYNVTLDK-EDEVCILYGTKNGLVAVPTCVINPGDYVLLPDPGYTDYLA--------GVLLADGKPVPLN--LEPP 165 (404)
T ss_dssp HHHHHHCCCCCT-TTSEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCSSHHH--------HHHHTTCEEEEEE--CCTT
T ss_pred HHHHHhCCCCCC-cccEEEcCCcHHHHHHHHHHhcCCCCEEEEcCCCchhHHH--------HHHHCCCEEEEec--cCcc
Confidence 988888975210 01599999998 8888999999999999999966655432 3445666565555 4434
Q ss_pred CCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccC---HHHHHHHHHhcCCEEEEeccccccccccCCC-CCCCC---cc
Q 023191 179 TGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVI-PSPFE---YA 249 (286)
Q Consensus 179 ~~~~d~e~l~~~i~~~~tk~v~i~-~~n-~g~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~-~~~~~---~~ 249 (286)
++.+|+++|++.+++ ++++|+++ ++| +|...+ +++|+++|++||+++|+|++|+......... ...+. +.
T Consensus 166 ~~~~d~~~l~~~l~~-~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~ 244 (404)
T 2o1b_A 166 HYLPDWSKVDSQIID-KTKLIYLTYPNNPTGSTATKEVFDEAIAKFKGTDTKIVHDFAYGAFGFDAKNPSILASENGKDV 244 (404)
T ss_dssp TCCCCGGGSCHHHHH-HEEEEEECSSCTTTCCCCCHHHHHHHHHHHTTSSCEEEEECTTTTCBSSSCCCCGGGSTTHHHH
T ss_pred cCcCCHHHHHHhhcc-CceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCChhhcCCCCCC
Confidence 567899999999876 89999997 666 676654 7889999999999999999987643321100 01111 35
Q ss_pred eEEEeCCCCCCC--CCCceEEEEecchhhhhc
Q 023191 250 DVVTTTTHKSLR--GPRGAMIFFRKGVKEINK 279 (286)
Q Consensus 250 D~v~~s~~K~l~--gp~gG~l~~~~~~~~~~~ 279 (286)
++++.|+||+|+ |.+.|++++++++.+..+
T Consensus 245 ~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~l~ 276 (404)
T 2o1b_A 245 AIEIYSLSKGYNMSGFRVGFAVGNKDMIQALK 276 (404)
T ss_dssp EEEEEESTTTTTCGGGCCEEEEECHHHHHHHH
T ss_pred EEEEEecchhccCchhheEeEecCHHHHHHHH
Confidence 789999999985 344599999888766554
No 66
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=99.87 E-value=3.6e-21 Score=174.46 Aligned_cols=238 Identities=14% Similarity=0.070 Sum_probs=161.2
Q ss_pred hccccccccChHHHHHHHHHHHH--HH--cCceecCCCCC----CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHH
Q 023191 22 QLNAPLEVVDPEIADIIEHEKAR--QW--KGLELIPSENF----TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMA 93 (286)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~--~~--~~i~L~~~e~~----~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l 93 (286)
++++++..+.+..+..+...... .. +.|+|..+.+. +++.+.+++.+.+.+.. .... |+...+..++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~idl~~g~~~~~~~~~~~v~~a~~~~~~~~~----~~~~-y~~~~~~~~l 80 (407)
T 2zc0_A 6 YLAGRANWIKGSALADVMKKASELQKKGVKLISLAAGDPDPELIPRAVLGEIAKEVLEKEP----KSVM-YTPANGIPEL 80 (407)
T ss_dssp GSCGGGGGCCCCHHHHHHHHHHHHHHSSCCCEECCSCCCCTTTSCHHHHHHHHHHHHHHCG----GGGS-CCCTTCCHHH
T ss_pred hhhhhhccCCchHHHHHHHhhhcccCCCCceEeCCCCCCCchhCCHHHHHHHHHHHHhhcc----cccc-CCCCCCCHHH
Confidence 34555555665555555444331 23 57899776542 56788898888775421 0111 3444567889
Q ss_pred HHHHHHHHHHHCCCCCCCcceeEEeCCChH-HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEe
Q 023191 94 ESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMP 172 (286)
Q Consensus 94 ~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~ 172 (286)
++++.+++.+.+|++.+. .+|++|+|++ ++.+++.+++++||+|+++.+.|.++. ..+...|.+++.++
T Consensus 81 ~~~la~~~~~~~g~~~~~--~~v~~t~g~t~a~~~~~~~~~~~gd~vl~~~p~~~~~~--------~~~~~~g~~~~~v~ 150 (407)
T 2zc0_A 81 REELAAFLKKYDHLEVSP--ENIVITIGGTGALDLLGRVLIDPGDVVITENPSYINTL--------LAFEQLGAKIEGVP 150 (407)
T ss_dssp HHHHHHHHHHHSCCCCCG--GGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHH--------HHHHTTTCEEEEEE
T ss_pred HHHHHHHHHHhcCCCCCc--ceEEEecCHHHHHHHHHHHhcCCCCEEEEeCCChHHHH--------HHHHHcCCEEEEcc
Confidence 999999998888853221 3599999988 888899999999999999996655542 23445666666565
Q ss_pred cccCCCCCCCCHHHHHHHhh----h-cCCcEEE-Ec-CCC-CCCccCHH---HHHHHHHhcCCEEEEeccccccccccCC
Q 023191 173 YRLNESTGYIDYDQLEKSAT----L-FRPKLIV-AG-ASA-YARLYDYE---RIRKVCNKQKAIMLADMAHISGLVAAGV 241 (286)
Q Consensus 173 ~~~~~~~~~~d~e~l~~~i~----~-~~tk~v~-i~-~~n-~g~~~~l~---~I~~ia~~~~~~vivD~a~~~g~~~~~~ 241 (286)
+ + ++ .+|++++++.++ + .++++|+ ++ ++| +|...|.+ +|+++|++||+++|+|++|+.+......
T Consensus 151 ~--~-~~-~~d~~~l~~~l~~~~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~ 226 (407)
T 2zc0_A 151 V--D-ND-GMRVDLLEEKIKELKAKGQKVKLIYTIPTGQNPMGVTMSMERRKALLEIASKYDLLIIEDTAYNFMRYEGGD 226 (407)
T ss_dssp E--E-TT-EECHHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBSSCSS
T ss_pred c--C-CC-CCCHHHHHHHHHhhhcccCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECCCcccccCCCC
Confidence 4 3 22 389999999987 4 2678875 45 556 67777765 9999999999999999998765432211
Q ss_pred CCC--CCC--cceEEEeCCCCCCCCC--CceEEEEecchhhhhc
Q 023191 242 IPS--PFE--YADVVTTTTHKSLRGP--RGAMIFFRKGVKEINK 279 (286)
Q Consensus 242 ~~~--~~~--~~D~v~~s~~K~l~gp--~gG~l~~~~~~~~~~~ 279 (286)
... .+. +.++++.|++|+|+ | +.|++++++++.+..+
T Consensus 227 ~~~~~~~~~~~~~i~~~s~sK~~~-~G~r~G~~~~~~~~~~~~~ 269 (407)
T 2zc0_A 227 IVPLKALDNEGRVIVAGTLSKVLG-TGFRIGWIIAEGEILKKVL 269 (407)
T ss_dssp CCCGGGGCSSCCEEEEEESTTTTC-TTSCCEEEECCHHHHHHHH
T ss_pred CCChhhcCCCCCEEEEcccccccC-CCcceEEEecCHHHHHHHH
Confidence 110 011 24578999999997 4 4699999887766554
No 67
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=99.87 E-value=4.5e-21 Score=171.90 Aligned_cols=215 Identities=12% Similarity=0.041 Sum_probs=154.1
Q ss_pred CceecCCCCC--CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-H
Q 023191 48 GLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-S 124 (286)
Q Consensus 48 ~i~L~~~e~~--~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a 124 (286)
.++|..++++ +++.+.+++.+.+.+... ....|+...+ .++++++.+++.+.+|...+. .+|++++|++ +
T Consensus 32 ~idl~~~~~~~~~~~~v~~a~~~~~~~~~~----~~~~y~~~~~-~~l~~~la~~l~~~~g~~~~~--~~v~~~~G~~~a 104 (369)
T 3cq5_A 32 DIRLNTNENPYPPSEALVADLVATVDKIAT----ELNRYPERDA-VELRDELAAYITKQTGVAVTR--DNLWAANGSNEI 104 (369)
T ss_dssp SEECSSCCCCSCCCHHHHHHHHHHHHHHGG----GTTSCCCTTC-HHHHHHHHHHHHHHHCCCCCG--GGEEEESHHHHH
T ss_pred ceeccCCCCCCCCCHHHHHHHHHHHHhccc----ccccCCCccH-HHHHHHHHHhhhhcccCCCCh--HhEEECCChHHH
Confidence 3889888874 589999999887754100 0011222233 588888888888876653221 3599999998 7
Q ss_pred HHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-C
Q 023191 125 NFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-A 203 (286)
Q Consensus 125 ~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~-~ 203 (286)
+.+++.+++++||+|+++++.|.++.. .+...|.+++.++ .+ +++.+|++++++.+++.++++|+++ +
T Consensus 105 l~~~~~~l~~~gd~Vl~~~~~y~~~~~--------~~~~~g~~~~~v~--~~-~~~~~d~~~l~~~i~~~~~~~v~~~~~ 173 (369)
T 3cq5_A 105 LQQLLQAFGGPGRTALGFQPSYSMHPI--------LAKGTHTEFIAVS--RG-ADFRIDMDVALEEIRAKQPDIVFVTTP 173 (369)
T ss_dssp HHHHHHHHCSTTCEEEEEESSCTHHHH--------HHHHTTCEEEEEE--CC-TTSSCCHHHHHHHHHHHCCSEEEEESS
T ss_pred HHHHHHHhcCCCCEEEEcCCChHHHHH--------HHHHcCCEEEEec--CC-cCCCCCHHHHHHHhhccCCCEEEEeCC
Confidence 777889999999999999977665532 3445566565555 44 4578999999999876579999997 6
Q ss_pred CC-CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCC-CCCc-ceEEEeCCCCCCCC--CCceEEEEecchhhhh
Q 023191 204 SA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPS-PFEY-ADVVTTTTHKSLRG--PRGAMIFFRKGVKEIN 278 (286)
Q Consensus 204 ~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~-~~~~-~D~v~~s~~K~l~g--p~gG~l~~~~~~~~~~ 278 (286)
+| +|...|.+++.++|+.+++++|+|++|+.+......... ...+ .++++.|+||+|+. .+.|++++++++.+..
T Consensus 174 ~nptG~~~~~~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~l 253 (369)
T 3cq5_A 174 NNPTGDVTSLDDVERIINVAPGIVIVDEAYAEFSPSPSATTLLEKYPTKLVVSRTMSKAFDFAGGRLGYFVANPAFIDAV 253 (369)
T ss_dssp CTTTCCCCCHHHHHHHHHHCSSEEEEECTTGGGCCSCCGGGGTTTCTTTEEEEEESSSTTSCGGGCCEEEEECTHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHhCCCEEEEECCchhhcCCcchHHHHhhCCCCEEEEEechHhcCCcccceEEEEeCHHHHHHH
Confidence 66 778899999999999999999999998865432111100 1013 56889999999853 3449999998877665
Q ss_pred cc
Q 023191 279 KQ 280 (286)
Q Consensus 279 ~~ 280 (286)
++
T Consensus 254 ~~ 255 (369)
T 3cq5_A 254 ML 255 (369)
T ss_dssp HT
T ss_pred HH
Confidence 54
No 68
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=99.87 E-value=1.8e-21 Score=179.27 Aligned_cols=244 Identities=11% Similarity=0.026 Sum_probs=167.8
Q ss_pred CCCchhhccccccccChHHHHHHHHHHHHHHcCceecCCCC----CCCHHHHHHhccccccCCCCCCCCCcccCCcchHH
Q 023191 16 GVTWPKQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSEN----FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYID 91 (286)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~L~~~e~----~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~ 91 (286)
...|..+++++.....+..++.+.... ...+.|+|..|.+ ++++.+.+++.+.+..... ....|+...+..
T Consensus 47 ~~~~~~~~s~~~~~~~~s~~~~~~~~~-~~~~~i~l~~g~p~~~~~p~~~v~~a~~~~l~~~~~----~~~~Y~~~~g~~ 121 (448)
T 3aow_A 47 LGDVERFFSKKALEMRASEVRELLKLV-ETSDIISLAGGLPNPKTFPKEIIRDILVEIMEKYAD----KALQYGTTKGFT 121 (448)
T ss_dssp TSCGGGGCCHHHHHCCCCHHHHHHHHH-HTSSSEECCCCCCCGGGSCHHHHHHHHHHHHHHSHH----HHHSCCCTTCCH
T ss_pred ccchHHHhhHHHhcCCCcHHHHHHHhc-cCCCcEeCCCCCCCchhCCHHHHHHHHHHHHHhhhH----HHhCCCCCCCcH
Confidence 355776777767667776666655532 3456789987765 2567888888877654100 001234445678
Q ss_pred HHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEE
Q 023191 92 MAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFET 170 (286)
Q Consensus 92 ~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 170 (286)
++++++.+++.+.+|++ +. .+|++|+|++ ++.+++.+++++||+|+++++.|.++. ..+...|.+++.
T Consensus 122 ~lr~~ia~~~~~~~g~~-~~--~~v~~t~G~~~al~~~~~~l~~~Gd~Vlv~~p~y~~~~--------~~~~~~g~~~~~ 190 (448)
T 3aow_A 122 PLRETLMKWLGKRYGIS-QD--NDIMITSGSQQALDLIGRVFLNPGDIVVVEAPTYLAAL--------QAFNFYEPQYIQ 190 (448)
T ss_dssp HHHHHHHHHHHHHHCCC-TT--SEEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCHHHH--------HHHHTTCCEEEE
T ss_pred HHHHHHHHHHHHhcCcC-Ch--hhEEEeCcHHHHHHHHHHHHcCCCCEEEEeCCChHHHH--------HHHHHcCCEEEE
Confidence 89988888887778983 22 3699999999 888799999999999999996555443 344556766655
Q ss_pred EecccCCCCCCCCHHHHHHHhh----h-cCCcEEEE-c-CCC-CCCccC---HHHHHHHHHhcCCEEEEecccccccccc
Q 023191 171 MPYRLNESTGYIDYDQLEKSAT----L-FRPKLIVA-G-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAA 239 (286)
Q Consensus 171 v~~~~~~~~~~~d~e~l~~~i~----~-~~tk~v~i-~-~~n-~g~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~~ 239 (286)
++ .+ ++ .+|+++|++.++ + .++|+|++ + ++| +|...+ +++|+++|++||+++|+|++|+......
T Consensus 191 v~--~~-~~-g~d~~~L~~~l~~~~~~~~~~k~v~~~~~~~NPtG~~~~~~~l~~i~~la~~~~~~lI~De~y~~~~~~g 266 (448)
T 3aow_A 191 IP--LD-DE-GMKVEILEEKLKELKSQGKKVKVVYTVPTFQNPAGVTMNEDRRKYLLELASEYDFIVVEDDPYGELRYSG 266 (448)
T ss_dssp EE--EE-TT-EECHHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECSCTTCBCSS
T ss_pred ec--cC-CC-CCCHHHHHHHHhhhhccCCCCeEEEECCCCCCCcCCCCCHHHHHHHHHHHHHcCCEEEEECCCccccCCC
Confidence 65 44 22 389999999987 3 27888854 5 566 676655 6789999999999999999987654322
Q ss_pred CCCCC--CC--CcceEEEeCCCCCCC-CCCceEEEEecchhhhhc
Q 023191 240 GVIPS--PF--EYADVVTTTTHKSLR-GPRGAMIFFRKGVKEINK 279 (286)
Q Consensus 240 ~~~~~--~~--~~~D~v~~s~~K~l~-gp~gG~l~~~~~~~~~~~ 279 (286)
..... .+ .+.++++.|++|+|+ |.+.|++++++++.+..+
T Consensus 267 ~~~~~~~~~~~~~~vi~~~S~SK~~~~GlriG~v~~~~~l~~~l~ 311 (448)
T 3aow_A 267 NPEKKIKALDNEGRVIYLGTFSKILAPGFRIGWMVGDPGIIRKME 311 (448)
T ss_dssp CCCCCTGGGCTTSCEEEEEESTTTTCGGGCCEEEEECHHHHHHHH
T ss_pred CCCcCHHhcCCCCCEEEEccchhhccccccEEEEEeCHHHHHHHH
Confidence 11111 11 135788999999986 223499999988766554
No 69
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=99.86 E-value=6.5e-22 Score=176.01 Aligned_cols=205 Identities=10% Similarity=0.003 Sum_probs=147.5
Q ss_pred cCceecCCCCCCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-HH
Q 023191 47 KGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SN 125 (286)
Q Consensus 47 ~~i~L~~~e~~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~ 125 (286)
+.++++++...+|+.+++++.+.+.+... ++. .......++.+.+++++++++|.+.. .+|++++|++ ++
T Consensus 4 ~~~~~~p~p~~~~~~v~~~~~~~~~~~~~-~~~-----~~~~~~~~~~~~~~~~la~~~g~~~~---~~v~~~~g~t~al 74 (362)
T 3ffr_A 4 NKIYFTPGPSELYPTVRQHMITALDEKIG-VIS-----HRSKKFEEVYKTASDNLKTLLELPSN---YEVLFLASATEIW 74 (362)
T ss_dssp CCEEECSSSCCCCTTHHHHHHHHHHTTTT-TSC-----TTSHHHHHHHHHHHHHHHHHTTCCTT---EEEEEESCHHHHH
T ss_pred cceeccCCCcCCCHHHHHHHHHHhcCCcc-CcC-----CCCHHHHHHHHHHHHHHHHHhCCCCC---cEEEEeCCchHHH
Confidence 35788888888899999888777655220 111 11234456777888999999998532 3699999988 88
Q ss_pred HHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CC
Q 023191 126 FQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-AS 204 (286)
Q Consensus 126 ~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~-~~ 204 (286)
.++++++++| .+++..+.+.++ .. ...+...|.+++.++ .+ +++.+|+++++ +++ +||+|+++ ++
T Consensus 75 ~~~~~~l~~~--~~i~~~~~~~~~--~~----~~~~~~~g~~~~~v~--~~-~~~~~d~~~l~--~~~-~~~~v~~~~~~ 140 (362)
T 3ffr_A 75 ERIIQNCVEK--KSFHCVNGSFSK--RF----YEFAGELGREAYKEE--AA-FGKGFYPADIT--VPA-DAEIICLTHNE 140 (362)
T ss_dssp HHHHHHHCSS--EEEEEECSHHHH--HH----HHHHHHTTCEEEEEE--CC-TTCCCCGGGCC--CCT-TCCEEEEESEE
T ss_pred HHHHHhccCC--cEEEEcCcHHHH--HH----HHHHHHhCCCeEEEe--cC-CCCCCCHHHHh--ccC-CccEEEEEcCC
Confidence 8899999988 444444322221 00 112334566666665 33 46789999998 655 89999997 65
Q ss_pred C-CCCccCHHHHHHHHHhc-CCEEEEeccccccccccCCCCCCCCcceEEEeCCCCCCCCCCc-eEEEEecchhhhhc
Q 023191 205 A-YARLYDYERIRKVCNKQ-KAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEINK 279 (286)
Q Consensus 205 n-~g~~~~l~~I~~ia~~~-~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~g-G~l~~~~~~~~~~~ 279 (286)
| +|...|+++|.++|++| |+++|+|++|+.+....+. ..+|++++|+||+|+||.| |++++++++.+..+
T Consensus 141 nptG~~~~l~~i~~la~~~p~~~li~D~a~~~~~~~~~~-----~~~d~~~~s~~K~~~~~~G~g~~~~~~~~~~~~~ 213 (362)
T 3ffr_A 141 TSSGVSMPVEDINTFRDKNKDALIFVDAVSSLPYPKFDW-----TKIDSVFFSVQKCFGLPAGLGVWILNDRVIEKSK 213 (362)
T ss_dssp TTTTEECCHHHHTTSGGGSTTSEEEEECTTTTTSSCCCT-----TSCSEEEEETTSTTCCCSCCEEEEEEHHHHHHHH
T ss_pred CCcceeCCHHHHHHHHHhCCCCEEEEecccccCCcccCh-----hHCcEEEEecccccCCCCceEEEEECHHHHHHhh
Confidence 5 77889999999999999 9999999999877654332 2289999999999998888 99999987655443
No 70
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=99.86 E-value=1.3e-22 Score=187.59 Aligned_cols=173 Identities=12% Similarity=0.075 Sum_probs=132.0
Q ss_pred HHHHHHHHHHHHCCCCCCCcceeEEeCCChH-HHHHHHHHhcCCCCe---EEeccCCCCcccCccccccccccccceeee
Q 023191 93 AESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLKPHDR---IMALDLPHGGHLSHGYQTDTKKISAVSIFF 168 (286)
Q Consensus 93 l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l~a~~~~Gd~---Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 168 (286)
+.+.+++++++++|++++ +|++|+|++ ++.+++.++++|||. |++..+.|++...+... .+...|..+
T Consensus 112 ~~~~l~~~la~~~g~~~~----~v~~t~g~t~al~~~~~~~~~~~~~~~~Vl~~~~~~~s~~~~~~~----~~~~~G~~~ 183 (465)
T 3e9k_A 112 GDESIVGLMKDIVGANEK----EIALMNALTVNLHLLMLSFFKPTPKRYKILLEAKAFPSDHYAIES----QLQLHGLNI 183 (465)
T ss_dssp TTHHHHGGGHHHHTCCGG----GEEECSCHHHHHHHHHHHHCCCCSSSCEEEEETTCCHHHHHHHHH----HHHHTTCCH
T ss_pred hHHHHHHHHHHHcCCCcC----CEEEECCHHHHHHHHHHHhccccCCCCEEEEcCCcCCchHHHHHH----HHHHcCCcc
Confidence 344567899999999864 599999999 777788999887766 99999888775433221 112233322
Q ss_pred -----EEEecccCCCCCCCCHHHHHHHhhh--cCCcEEEEc-CCC-CCCccCHHHHHHHHHhcCCEEEEecccccccccc
Q 023191 169 -----ETMPYRLNESTGYIDYDQLEKSATL--FRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAA 239 (286)
Q Consensus 169 -----~~v~~~~~~~~~~~d~e~l~~~i~~--~~tk~v~i~-~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~ 239 (286)
...+ .+ +++.+|+++|++++++ .++++|+++ ++| +|...|+++|.++|++||++||+|++|+.|..+.
T Consensus 184 ~~~~v~~~~--~~-~~~~~d~~~l~~~i~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~la~~~g~~vi~D~a~~~g~~~~ 260 (465)
T 3e9k_A 184 EESMRMIKP--RE-GEETLRIEDILEVIEKEGDSIAVILFSGVHFYTGQHFNIPAITKAGQAKGCYVGFDLAHAVGNVEL 260 (465)
T ss_dssp HHHEEEECC--CT-TCSSCCHHHHHHHHHHHGGGEEEEEEESBCTTTCBBCCHHHHHHHHHHTTCEEEEECTTTTTTSCC
T ss_pred eeeeEEEec--CC-CCCccCHHHHHHHHHhcCCCeEEEEEeCcccCcceeecHHHHHHHHHHcCCEEEEEhhhhcCCcCC
Confidence 2222 23 5678999999999973 278999887 666 7889999999999999999999999999988765
Q ss_pred CCCCCCCCcceEEEeCCCCCC-CCCCc-eEEEEecchhhhhc
Q 023191 240 GVIPSPFEYADVVTTTTHKSL-RGPRG-AMIFFRKGVKEINK 279 (286)
Q Consensus 240 ~~~~~~~~~~D~v~~s~~K~l-~gp~g-G~l~~~~~~~~~~~ 279 (286)
++.... +|++++|+||++ +||.| |++++++++.+..+
T Consensus 261 ~~~~~~---~D~~~~s~~K~l~~gp~~~g~l~~~~~~~~~~~ 299 (465)
T 3e9k_A 261 YLHDWG---VDFACWCSYKYLNAGAGGIAGAFIHEKHAHTIK 299 (465)
T ss_dssp CHHHHT---CCEEEECSSSTTCCCTTCCCEEEECGGGTTTSC
T ss_pred chhhcC---CCEEEECcccccccCCCceEEEEEcHHHHhhcC
Confidence 544444 899999999999 48888 99999988765443
No 71
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=99.86 E-value=2.3e-22 Score=182.42 Aligned_cols=237 Identities=11% Similarity=0.025 Sum_probs=163.5
Q ss_pred cccccChHHHHHHHHHHHHHHcCceecCCCCC--CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHH
Q 023191 26 PLEVVDPEIADIIEHEKARQWKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALE 103 (286)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~i~L~~~e~~--~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 103 (286)
++..++++.+..+.+.. ...+.|+|..+++. +++.+++++.+.+.+....+ |+...+..++++++.+++.+
T Consensus 4 ~~~~~~~~~~~~~~~~~-~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~------y~~~~g~~~l~~~la~~~~~ 76 (410)
T 3e2y_A 4 RIEGLDSNVWVEFTKLA-ADPSVVNLGQGFPDISPPSYVKEELSKAAFIDNMNQ------YTRGFGHPALVKALSCLYGK 76 (410)
T ss_dssp GGTTCCCCHHHHTTTTT-TSTTSEECSSCCCCSCCCHHHHHHHHHHHTCGGGGS------CCCTTCCHHHHHHHHHHHHH
T ss_pred hhccCCccHHHHHHHHh-cCCCeEEecCCCCCCCCCHHHHHHHHHHHhCccccC------CCCCCChHHHHHHHHHHHHH
Confidence 34445555555544321 22467999988873 68999999988775421112 33334567899899999988
Q ss_pred HCCCCCCCcceeEEeCCChH-HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccC------
Q 023191 104 AFRLDPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLN------ 176 (286)
Q Consensus 104 ~~g~~~~~~~~~v~~~sG~~-a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~------ 176 (286)
.+|.+.+. ..+|++++|++ ++..++.+++++||+|+++.+.|.++. ..+...|..++.+++...
T Consensus 77 ~~~~~~~~-~~~i~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~--------~~~~~~g~~~~~~~~~~~~~~g~~ 147 (410)
T 3e2y_A 77 IYQRQIDP-NEEILVAVGAYGSLFNSIQGLVDPGDEVIIMVPFYDCYE--------PMVRMAGAVPVFIPLRSKPTDGMK 147 (410)
T ss_dssp HHTSCCCT-TTSEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHH--------HHHHHTTCEEEEEECEECCCCSSC
T ss_pred HhCCCCCC-CCCEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhhH--------HHHHHcCCEEEEEecccccccccc
Confidence 88864311 01599999998 888899999999999999996665543 244456666666664421
Q ss_pred --CCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCc---cCHHHHHHHHHhcCCEEEEeccccccccccCCCCC--CCC
Q 023191 177 --ESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARL---YDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPS--PFE 247 (286)
Q Consensus 177 --~~~~~~d~e~l~~~i~~~~tk~v~i~-~~n-~g~~---~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~--~~~ 247 (286)
..++.+|++++++.+++ ++++|+++ ++| +|.. .++++|+++|++||+++|+|++|+........... .+.
T Consensus 148 ~~~~~~~~d~~~l~~~~~~-~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~ 226 (410)
T 3e2y_A 148 WTSSDWTFDPRELESKFSS-KTKAIILNTPHNPLGKVYTRQELQVIADLCVKHDTLCISDEVYEWLVYTGHTHVKIATLP 226 (410)
T ss_dssp CBGGGEECCHHHHHTTCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGST
T ss_pred ccccCCcCCHHHHHhhcCC-CceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEhhhhhcccCCCCCCCHHHcC
Confidence 13457899999999977 89999987 666 6655 46889999999999999999998643322111110 011
Q ss_pred ---cceEEEeCCCCCCC--CCCceEEEEecchhhhhc
Q 023191 248 ---YADVVTTTTHKSLR--GPRGAMIFFRKGVKEINK 279 (286)
Q Consensus 248 ---~~D~v~~s~~K~l~--gp~gG~l~~~~~~~~~~~ 279 (286)
..++++.|++|+|+ |.+.|++++++++.+..+
T Consensus 227 ~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~~~~~~~~ 263 (410)
T 3e2y_A 227 GMWERTITIGSAGKTFSVTGWKLGWSIGPAHLIKHLQ 263 (410)
T ss_dssp TCGGGEEEEEEHHHHSSCGGGCCEEEECCHHHHHHHH
T ss_pred CccCeEEEEecchhhcCCCCceEEEEEECHHHHHHHH
Confidence 24588999999885 444599999988766554
No 72
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=99.86 E-value=6.7e-21 Score=177.96 Aligned_cols=199 Identities=11% Similarity=0.029 Sum_probs=147.1
Q ss_pred CCCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCC--CCCcceeEEeCCChH-HHHHHHHHh
Q 023191 56 NFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLD--PEKWGVNVQSLSGSP-SNFQVYTAL 132 (286)
Q Consensus 56 ~~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~--~~~~~~~v~~~sG~~-a~~~~l~a~ 132 (286)
.++++.+.+++.+++...+. + +.......++++.+++++++++|++ +++. ..-.+++|++ +++.++.++
T Consensus 66 ~~~~~~v~~~l~~~~~~~~~--~-----~~~~p~~~~le~~~~~~la~l~g~~~~~~~~-~~g~~t~ggtea~~~a~~a~ 137 (502)
T 3hbx_A 66 TWMEPECDKLIMSSINKNYV--D-----MDEYPVTTELQNRCVNMIAHLFNAPLEEAET-AVGVGTVGSSEAIMLAGLAF 137 (502)
T ss_dssp CCCCHHHHHHHHHTTTCBTT--C-----TTTCHHHHHHHHHHHHHHHHHTTCCCCSSCC-CEEEEESSHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHhccCCC--C-----hhcChhHHHHHHHHHHHHHHHhCCCcccccC-CcceecCcHHHHHHHHHHHH
Confidence 34689999999888765331 1 1233557899999999999999997 4331 1123467777 887777777
Q ss_pred cCC--------CC-----eEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEE
Q 023191 133 LKP--------HD-----RIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLI 199 (286)
Q Consensus 133 ~~~--------Gd-----~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v 199 (286)
..+ |+ +|+++++.|.++. ..+...|..++.++ ++.+++.+|+++|++++++ +|++|
T Consensus 138 ~~~~~~~~~~~G~~~~~~~vi~~~~~h~s~~--------~~~~~~G~~~~~v~--~~~~~~~~d~~~l~~~i~~-~t~~v 206 (502)
T 3hbx_A 138 KRKWQNKRKAEGKPVDKPNIVTGANVQVCWE--------KFARYFEVELKEVK--LSEGYYVMDPQQAVDMVDE-NTICV 206 (502)
T ss_dssp HHHHHHHHHHTTCCCSCCEEEEETTCCHHHH--------HHHHHTTCEEEEEC--CBTTBCSCCHHHHHHHCCT-TEEEE
T ss_pred HHHHhHHHHhcCCCCCCcEEEEcCCchHHHH--------HHHHHcCceeEEEe--cCCCcCcCCHHHHHHHHhh-CCEEE
Confidence 655 77 8999986665543 34556777776666 4434589999999999988 89988
Q ss_pred EEc-CCC-CCCccCHHHHHHHHHhc------CCEEEEeccccccccc--cCCCCCC--CCcceEEEeCCCCCCCCCCc-e
Q 023191 200 VAG-ASA-YARLYDYERIRKVCNKQ------KAIMLADMAHISGLVA--AGVIPSP--FEYADVVTTTTHKSLRGPRG-A 266 (286)
Q Consensus 200 ~i~-~~n-~g~~~~l~~I~~ia~~~------~~~vivD~a~~~g~~~--~~~~~~~--~~~~D~v~~s~~K~l~gp~g-G 266 (286)
+++ ++| +|...|+++|.++|+++ |+++++|+||+.+..+ .+..+.. ..++|++++++|||+.+|.| |
T Consensus 207 ~~~~~~n~tG~~~~l~~I~~ia~~~~~~~~~~~~l~VD~A~~~~~~p~~~~~~~~~~~~~~~D~v~~s~hK~l~~p~g~G 286 (502)
T 3hbx_A 207 AAILGSTLNGEFEDVKLLNDLLVEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIG 286 (502)
T ss_dssp EEEBSCTTTCCBCCHHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCSTTSTTEEEEEEETTTTTCCCSSCE
T ss_pred EEecCCCCCCcccCHHHHHHHHHHhhhccCCCCeEEEECCccchhhhhhCcccccccCCCCceEEEECcccccCCCCCeE
Confidence 886 666 78999999999999999 9999999998755431 1111221 23699999999999989988 9
Q ss_pred EEEEecc
Q 023191 267 MIFFRKG 273 (286)
Q Consensus 267 ~l~~~~~ 273 (286)
+++++++
T Consensus 287 ~~~~~~~ 293 (502)
T 3hbx_A 287 WVIWRNK 293 (502)
T ss_dssp EEEESSG
T ss_pred EEEEeCH
Confidence 8888764
No 73
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=99.86 E-value=1.2e-21 Score=176.23 Aligned_cols=210 Identities=13% Similarity=0.169 Sum_probs=151.9
Q ss_pred HcCceecCCCC--CCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCC--CCCCCcceeEEeCCC
Q 023191 46 WKGLELIPSEN--FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFR--LDPEKWGVNVQSLSG 121 (286)
Q Consensus 46 ~~~i~L~~~e~--~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g--~~~~~~~~~v~~~sG 121 (286)
.+.++|..+++ ++++.+++++.+.+.+.. .+| + .+..++++++++++++++| ++++ +|++|+|
T Consensus 32 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~-~~y------~--~~~~~~~~~l~~~l~~~~g~~~~~~----~v~~~~g 98 (391)
T 4dq6_A 32 NDLLPMWVADMDFKAAPCIIDSLKNRLEQEI-YGY------T--TRPDSYNESIVNWLYRRHNWKIKSE----WLIYSPG 98 (391)
T ss_dssp SCSEECCSSSCSSCCCHHHHHHHHHHHTTCC-CCC------B--CCCHHHHHHHHHHHHHHHCCCCCGG----GEEEESC
T ss_pred CCceeccccCCCCCCCHHHHHHHHHHHhCCC-CCC------C--CCCHHHHHHHHHHHHHHhCCCCcHH----HeEEcCC
Confidence 46789988877 468999999998876521 122 1 1336888899999999999 4553 5999999
Q ss_pred hH-HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecc-cCCCCCCCCHHHHHHHhhhcCCcEE
Q 023191 122 SP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYR-LNESTGYIDYDQLEKSATLFRPKLI 199 (286)
Q Consensus 122 ~~-a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-~~~~~~~~d~e~l~~~i~~~~tk~v 199 (286)
++ ++.+++.+++++||+|+++.+.|.++.. .+...|.+++.++++ ....++.+|++++++++++ +++|
T Consensus 99 ~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~--------~~~~~g~~~~~~~~~~~~~~~~~~d~~~l~~~l~~--~~~v 168 (391)
T 4dq6_A 99 VIPAISLLINELTKANDKIMIQEPVYSPFNS--------VVKNNNRELIISPLQKLENGNYIMDYEDIENKIKD--VKLF 168 (391)
T ss_dssp HHHHHHHHHHHHSCTTCEEEECSSCCTHHHH--------HHHHTTCEEEECCCEECTTSCEECCHHHHHHHCTT--EEEE
T ss_pred hHHHHHHHHHHhCCCCCEEEEcCCCCHHHHH--------HHHHcCCeEEeeeeeecCCCceEeeHHHHHHHhhc--CCEE
Confidence 99 8887999999999999999966655432 444567666666543 2224567999999999976 8888
Q ss_pred EEc-CCC-CCCc---cCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCC-------cceEEEeCCCCCCC--CCCc
Q 023191 200 VAG-ASA-YARL---YDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFE-------YADVVTTTTHKSLR--GPRG 265 (286)
Q Consensus 200 ~i~-~~n-~g~~---~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~-------~~D~v~~s~~K~l~--gp~g 265 (286)
+++ ++| +|.. .++++|+++|++||+++|+|++|+....... ....+. ...+++.|+||+++ |.+.
T Consensus 169 ~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~-~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~ 247 (391)
T 4dq6_A 169 ILCNPHNPVGRVWTKDELKKLGDICLKHNVKIISDEIHSDIILKKH-KHIPMASISKEFEKNTITCMAPTKTFNIAGLQS 247 (391)
T ss_dssp EEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTC-CCCCGGGSCHHHHHTEEEEECSHHHHTCGGGCC
T ss_pred EEECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEeeccccccccCCC-CccCHHHcCccccCcEEEEEechhhccCcccce
Confidence 887 666 6665 5688999999999999999999875433211 111111 12388999999884 3445
Q ss_pred eEEEEec-chhhhhc
Q 023191 266 AMIFFRK-GVKEINK 279 (286)
Q Consensus 266 G~l~~~~-~~~~~~~ 279 (286)
|++++++ ++.+..+
T Consensus 248 G~~~~~~~~~~~~~~ 262 (391)
T 4dq6_A 248 SYVVLPDEKDYKLLD 262 (391)
T ss_dssp EEEECCSHHHHHHHH
T ss_pred EEEEeCCHHHHHHHH
Confidence 9999887 6665544
No 74
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=99.86 E-value=9.6e-21 Score=172.04 Aligned_cols=226 Identities=12% Similarity=0.097 Sum_probs=155.9
Q ss_pred cccChHHHHHHHHHHHHHH----c-------------CceecCCCC---CCCHHHHHHhccccccCCCCCCCCCc-ccCC
Q 023191 28 EVVDPEIADIIEHEKARQW----K-------------GLELIPSEN---FTSVSVMQAVGSVMTNKYSEGYPGAR-YYGG 86 (286)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~----~-------------~i~L~~~e~---~~~~~v~~a~~~~l~~~~~~~~~~~~-~~~~ 86 (286)
+.++++++..+........ + .+++..++. ..++.+++++.+.+.. |..++.... .++.
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ld~~s~~~l~~~~~p~v~~a~~~~l~~-~~~~~~~~~~~~g~ 102 (409)
T 3kki_A 24 PQLPDFIQNKIDHYIENYFDINKNGKHLVLGKQASPDDIILQSNDYLALANHPLIKARLAKSLLE-EQQSLFMSASFLQN 102 (409)
T ss_dssp CCCCHHHHHHHHHHHHHHTTTSTTSSCTTCCCCCCTTSEECCCSCTTCCTTCHHHHHHHHHHHHS-CCCCCCSBGGGGCS
T ss_pred ccchHHHHHHHHHHHHHHhhhccCCCeeeeCCCCCCceEEeeccCccCCcCCHHHHHHHHHHHHH-cCCCCCccccccCC
Confidence 5578888888876543321 1 133333321 2579999999988865 322322221 2222
Q ss_pred cchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChHHHHHHHHHhcCCCCeEEeccCCCCcccCcccccccccccccee
Q 023191 87 NEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSI 166 (286)
Q Consensus 87 ~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~ 166 (286)
.....+ +++++++++|.+. .+++++|+.++.+++.+++++||.|+++++.|+++.. .+...|.
T Consensus 103 ~~~~~~----l~~~la~~~g~~~-----~i~~~sGt~a~~~~l~~~~~~gd~Vl~~~~~~~~~~~--------~~~~~g~ 165 (409)
T 3kki_A 103 DYDKPM----IEKRLAKFTGFDE-----CLLSQSGWNANVGLLQTICQPNTNVYIDFFAHMSLWE--------GARYANA 165 (409)
T ss_dssp TTTSCH----HHHHHHHHHTCSE-----EEEESCHHHHHHHHHHHHCCTTCEEEEETTSCHHHHH--------HHHHTTC
T ss_pred cHHHHH----HHHHHHHHhCCCe-----EEEecchHHHHHHHHHHhcCCCCEEEECCCcCHHHHH--------HHHHcCC
Confidence 222333 4577888888764 4888888778888999999999999999977666543 3345564
Q ss_pred eeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCC--
Q 023191 167 FFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVI-- 242 (286)
Q Consensus 167 ~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~-~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~-- 242 (286)
.+..+ + ..|+++|++++++.++++|+++ ++| +|...++++|.++|++||+++|+|++|+.|.....-.
T Consensus 166 ~~~~~--~------~~d~~~le~~l~~~~~~~vi~~~~~nptG~~~~l~~l~~la~~~~~~li~De~~~~g~~g~~g~~~ 237 (409)
T 3kki_A 166 QAHPF--M------HNNCDHLRMLIQRHGPGIIVVDSIYSTLGTIAPLAELVNISKEFGCALLVDESHSLGTHGPNGAGL 237 (409)
T ss_dssp EEEEE--C------TTCHHHHHHHHHHHCSCEEEEESBCTTTCCBCCHHHHHHHHHHHTCEEEEECTTTTTTSSGGGCCH
T ss_pred eEEEe--c------CCCHHHHHHHHHhcCCeEEEECCCCCCCCCcCCHHHHHHHHHHcCCEEEEECCccccccCCCCCcc
Confidence 44333 2 2589999999987578999998 555 6788899999999999999999999998765421100
Q ss_pred --CCCC-CcceEEEeCCCCCCCCCCceEEEEecchhhhhcc
Q 023191 243 --PSPF-EYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQ 280 (286)
Q Consensus 243 --~~~~-~~~D~v~~s~~K~l~gp~gG~l~~~~~~~~~~~~ 280 (286)
...+ ..+|+++.|++|+|+++ ||++++++++.+..++
T Consensus 238 ~~~~~~~~~~di~~~s~sK~~~~~-gg~v~~~~~~~~~~~~ 277 (409)
T 3kki_A 238 LAELGLTREVHFMTASLAKTFAYR-AGAIWCNNEVNRCVPF 277 (409)
T ss_dssp HHHHTCGGGCSEEEEESSSTTCSS-CEEEEESSSGGGTHHH
T ss_pred hhhcCCCCCCCEEEeecchhhCCC-ceEEEECHHHHHHHHH
Confidence 0111 13789999999999766 8999999988776553
No 75
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=99.86 E-value=1.1e-21 Score=176.93 Aligned_cols=207 Identities=20% Similarity=0.218 Sum_probs=147.2
Q ss_pred CceecCCCC---CCCHHHHHHhccccccCCCCCCCCCcc-cCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH
Q 023191 48 GLELIPSEN---FTSVSVMQAVGSVMTNKYSEGYPGARY-YGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP 123 (286)
Q Consensus 48 ~i~L~~~e~---~~~~~v~~a~~~~l~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~ 123 (286)
.++|..+.+ ..++.+.+++.+.+.. +..+++..++ ++..+... ++++++++++|.+. .|++++|+.
T Consensus 45 ~id~~~~~~~g~~~~~~v~~a~~~~~~~-~~~~~~~~~~~~g~~~~~~----~l~~~la~~~~~~~-----~i~~~sGt~ 114 (399)
T 3tqx_A 45 VLNFCANNYLGLADHPALIKTAQTVVEQ-YGFGMASVRFICGTQTIHK----ELEKDISEFLGTDD-----TILYSSCFD 114 (399)
T ss_dssp EEECSSCCTTSCTTCHHHHHHHHHHHHH-HCSCCCSCCCCCCCBHHHH----HHHHHHHHHHTCSE-----EEEESCHHH
T ss_pred EEEeeccCcccccCCHHHHHHHHHHHHH-hCCCCCCcCccccCchHHH----HHHHHHHHHHCCCc-----EEEECchHH
Confidence 477777754 2479999999888765 3223322222 22333334 45577888888753 589999977
Q ss_pred HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhc-----CCcE
Q 023191 124 SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF-----RPKL 198 (286)
Q Consensus 124 a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~-----~tk~ 198 (286)
++..++.+++++||.|++..+.|+++.. .+...|..+..++ . .|++++++.+++. ++++
T Consensus 115 a~~~~l~~~~~~gd~v~~~~~~~~~~~~--------~~~~~g~~~~~~~--~------~d~~~l~~~l~~~~~~~~~~~~ 178 (399)
T 3tqx_A 115 ANGGLFETLLGPEDAIISDELNHASIID--------GIRLCKAQRYRYK--N------NAMGDLEAKLKEADEKGARFKL 178 (399)
T ss_dssp HHHTTHHHHCCTTCEEEEETTCCHHHHH--------HHHSCCSEEEEEC--T------TCTTHHHHHHHHHHTTTCSSEE
T ss_pred HHHHHHHHhcCCCCEEEECCcccHHHHH--------HHHHcCCceeEeC--C------CCHHHHHHHHHhhhccCCCceE
Confidence 7777889999999999999976666533 4455665554443 2 4677888888753 7889
Q ss_pred EEEc-CCC-CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCC----CC-CCcceEEEeCCCCCCCCCCceEEEEe
Q 023191 199 IVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIP----SP-FEYADVVTTTTHKSLRGPRGAMIFFR 271 (286)
Q Consensus 199 v~i~-~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~----~~-~~~~D~v~~s~~K~l~gp~gG~l~~~ 271 (286)
|+++ ++| +|...|+++|.++|++||+++|+|++|+.|........ .. ....|++++|+||+|+|++||+++++
T Consensus 179 v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~g~~gG~~~~~ 258 (399)
T 3tqx_A 179 IATDGVFSMDGIIADLKSICDLADKYNALVMVDDSHAVGFIGENGRGTPEYCGVADRVDILTGTLGKALGGASGGYTSGH 258 (399)
T ss_dssp EEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTTTTSSTTSCCHHHHHTCTTCCSEEEEESSSSSCSSCCEEEEEC
T ss_pred EEEeCCCCCCCCcCCHHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCCcEEEecchHhcccCceEEEEcC
Confidence 9987 445 67888999999999999999999999976654322110 11 12479999999999988999999999
Q ss_pred cchhhhhcc
Q 023191 272 KGVKEINKQ 280 (286)
Q Consensus 272 ~~~~~~~~~ 280 (286)
+++.+..++
T Consensus 259 ~~~~~~~~~ 267 (399)
T 3tqx_A 259 KEIIEWLRN 267 (399)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 887766553
No 76
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=99.86 E-value=7.3e-21 Score=167.93 Aligned_cols=201 Identities=14% Similarity=0.126 Sum_probs=144.2
Q ss_pred HcCceecCCCCC--CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH
Q 023191 46 WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP 123 (286)
Q Consensus 46 ~~~i~L~~~e~~--~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~ 123 (286)
.+.|+|..++++ +++.+++++.+.+.... +|+ ..+..+++ +.+++++|++++ +|++|+|++
T Consensus 16 ~~~i~l~~n~~~~~~~~~v~~a~~~~~~~~~--~y~-------~~~~~~lr----~~la~~~~~~~~----~i~~t~G~~ 78 (337)
T 3p1t_A 16 AQAVCLAFNENPEAVEPRVQAAIAAAAARIN--RYP-------FDAEPRVM----RKLAEHFSCPED----NLMLVRGID 78 (337)
T ss_dssp CCCEECSSCCCCSCCCHHHHHHHHHHGGGTT--SCC-------TTHHHHHH----HHHHHHHTSCGG----GEEEESHHH
T ss_pred CCceEeeCCCCCCCCCHHHHHHHHHhhhhhc--cCC-------CCchHHHH----HHHHHHhCcCHH----HEEEeCCHH
Confidence 467999999885 68999999988775411 232 23455555 667777888764 599999999
Q ss_pred -HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc
Q 023191 124 -SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG 202 (286)
Q Consensus 124 -a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~ 202 (286)
++.+++.++ +||+|+++++.|.++ ...+...|.+++.++ .+ +++.+|++++++. . ++++++++
T Consensus 79 ~~l~~~~~~~--~gd~vl~~~p~~~~~--------~~~~~~~g~~~~~v~--~~-~~~~~d~~~l~~~--~-~~~~v~i~ 142 (337)
T 3p1t_A 79 ECFDRISAEF--SSMRFVTAWPGFDGY--------RARIAVSGLRHFEIG--LT-DDLLLDPNDLAQV--S-RDDCVVLA 142 (337)
T ss_dssp HHHHHHHHHS--TTSEEEEESSSCSHH--------HHHHTTSCCEEEEEC--BC-TTSSBCHHHHTTC--C-TTEEEEEE
T ss_pred HHHHHHHHhc--CCCeEEEeCCCcHHH--------HHHHHHcCCEEEEec--CC-CCCCCCHHHHHhh--c-CCCEEEEe
Confidence 777666666 999999999655554 334456676665554 44 4678999999876 3 68898887
Q ss_pred -CCC-CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCCcceEEEeCCCCCCC--CCCceEEEEecchhhhh
Q 023191 203 -ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLR--GPRGAMIFFRKGVKEIN 278 (286)
Q Consensus 203 -~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~--gp~gG~l~~~~~~~~~~ 278 (286)
++| +|...|++++.++|+++++ +|+|++|.. ..............++++.|++|+|+ |.+.|++++++++.+..
T Consensus 143 ~p~nptG~~~~~~~l~~l~~~~~~-~ivDea~~~-~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~~~~~~l 220 (337)
T 3p1t_A 143 NPSNPTGQALSAGELDQLRQRAGK-LLIDETYVD-YSSFRARGLAYGENELVFRSFSKSYGLAGLRLGALFGPSELIAAM 220 (337)
T ss_dssp SSCTTTCCCCCHHHHHHHHHHCSE-EEEECTTGG-GSSCSSSCCCCBTTEEEEEESSSTTCCTTTCCEEEECCHHHHHHH
T ss_pred CCCCCCCCCCCHHHHHHHHHhCCc-EEEECCChh-hccccccccccCCCEEEEeeCchhccCcchheEEEEeCHHHHHHH
Confidence 767 7899999999999999997 566999763 22111111112246799999999884 55569999998877666
Q ss_pred ccC
Q 023191 279 KQG 281 (286)
Q Consensus 279 ~~~ 281 (286)
++.
T Consensus 221 ~~~ 223 (337)
T 3p1t_A 221 KRK 223 (337)
T ss_dssp HTT
T ss_pred Hhh
Confidence 543
No 77
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=99.86 E-value=4.6e-21 Score=171.38 Aligned_cols=207 Identities=14% Similarity=0.061 Sum_probs=146.7
Q ss_pred cCceecCCCCC--CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCC-CCCCcceeEEeCCChH
Q 023191 47 KGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRL-DPEKWGVNVQSLSGSP 123 (286)
Q Consensus 47 ~~i~L~~~e~~--~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~-~~~~~~~~v~~~sG~~ 123 (286)
+.|+|..++++ +++.+++++.+.+.+....+|+. .+..+++ +.+++++|+ +++ +|++|+|++
T Consensus 31 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~-------~~~~~l~----~~la~~~g~~~~~----~i~~~~g~t 95 (367)
T 3euc_A 31 GLVKLDAMENPYRLPPALRSELAARLGEVALNRYPV-------PSSEALR----AKLKEVMQVPAGM----EVLLGNGSD 95 (367)
T ss_dssp TCEECCSSCCCCCCCHHHHHHHHHHHHHHHTTCSCC-------CCHHHHH----HHHHHHHTCCTTC----EEEEEEHHH
T ss_pred CeeEccCCCCCCCCCHHHHHHHHHHhhhhhhhcCCC-------CcHHHHH----HHHHHHhCCCCcc----eEEEcCCHH
Confidence 56999988885 68999999988776311112322 2344555 777777888 443 699999999
Q ss_pred -HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc
Q 023191 124 -SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG 202 (286)
Q Consensus 124 -a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~ 202 (286)
++.+++.+++++||+|+++.+.|.++.. .+...|.+++.++ .+ +++.+|+++++++++++++++|+++
T Consensus 96 ~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~--------~~~~~g~~~~~v~--~~-~~~~~d~~~l~~~l~~~~~~~v~~~ 164 (367)
T 3euc_A 96 EIISMLALAAARPGAKVMAPVPGFVMYAM--------SAQFAGLEFVGVP--LR-ADFTLDRGAMLAAMAEHQPAIVYLA 164 (367)
T ss_dssp HHHHHHHHHTCCTTCEEEEEESCSCCSCH--------HHHTTTCEEEEEE--CC-TTSCCCHHHHHHHHHHHCCSEEEEE
T ss_pred HHHHHHHHHHcCCCCEEEEcCCCHHHHHH--------HHHHcCCeEEEec--CC-CCCCCCHHHHHHHhhccCCCEEEEc
Confidence 8887889999999999999966655432 3445676665555 44 4688999999999987689999997
Q ss_pred -CCC-CCCcc---CHHHHHHHHHhc--CCEEEEeccccccccccCCCCC-CCCcceEEEeCCCCCC-CCCCceEEEEecc
Q 023191 203 -ASA-YARLY---DYERIRKVCNKQ--KAIMLADMAHISGLVAAGVIPS-PFEYADVVTTTTHKSL-RGPRGAMIFFRKG 273 (286)
Q Consensus 203 -~~n-~g~~~---~l~~I~~ia~~~--~~~vivD~a~~~g~~~~~~~~~-~~~~~D~v~~s~~K~l-~gp~gG~l~~~~~ 273 (286)
++| +|... ++++|+++|++| |+++|+|++|+... ....... ...+.++++.|+||+. .|.+.|+++++++
T Consensus 165 ~~~nptG~~~~~~~l~~i~~~~~~~~~~~~li~De~~~~~~-~~~~~~~~~~~~~~i~~~s~sK~~~~G~r~G~~~~~~~ 243 (367)
T 3euc_A 165 YPNNPTGNLFDAADMEAIVRAAQGSVCRSLVVVDEAYQPFA-QESWMSRLTDFGNLLVMRTVSKLGLAGIRLGYVAGDPQ 243 (367)
T ss_dssp SSCTTTCCCCCHHHHHHHHHHTBTTSCBCEEEEECTTCCSS-SCCSGGGGGTCTTEEEEEECCCTTSCSCCEEEEEECHH
T ss_pred CCCCCCCCCCCHHHHHHHHHhhhhcCCCcEEEEeCcchhhc-ccchHHHHhhCCCEEEEecchhhcccccCceeeeeCHH
Confidence 666 67654 577888889999 99999999976421 1111100 0012568899999982 2233499999888
Q ss_pred hhhhhcc
Q 023191 274 VKEINKQ 280 (286)
Q Consensus 274 ~~~~~~~ 280 (286)
+.+..++
T Consensus 244 ~~~~~~~ 250 (367)
T 3euc_A 244 WLEQLDK 250 (367)
T ss_dssp HHHHHGG
T ss_pred HHHHHHH
Confidence 7766554
No 78
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=99.86 E-value=5.7e-21 Score=171.24 Aligned_cols=226 Identities=14% Similarity=0.026 Sum_probs=154.4
Q ss_pred ChHHHHHHHHHHHHH---HcCceecCCCCC--CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHC
Q 023191 31 DPEIADIIEHEKARQ---WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAF 105 (286)
Q Consensus 31 ~~~~~~~~~~~~~~~---~~~i~L~~~e~~--~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 105 (286)
+++.+..+.+..... .+.|+|..++++ +|+.+++++.+.+.... + |+...+..++++++.+++.+.+
T Consensus 5 ~~~~~~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~--~------y~~~~g~~~lr~~la~~l~~~~ 76 (376)
T 3ezs_A 5 EPYPFERLRALLKEITPKKRGLDLGIGEPQFETPKFIQDALKNHTHSLN--I------YPKSAFEESLRAAQRGFFKRRF 76 (376)
T ss_dssp CCCHHHHHHHHHTTCCCSSCCCBCSSCCCCSCCCHHHHHHHHTTGGGGG--S------CCCTTCCHHHHHHHHHHHHHHH
T ss_pred CcchHHHHHHHHHhhhccCCEEEeCCCCCCCCCCHHHHHHHHHhhhhcC--C------CCCCCCCHHHHHHHHHHHHHHh
Confidence 344455554433221 257899888874 58999999988773211 2 2333456789999999999988
Q ss_pred CCCCCCcceeEEeCCChH-HHHHHHHHhcCC--CCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCC
Q 023191 106 RLDPEKWGVNVQSLSGSP-SNFQVYTALLKP--HDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYI 182 (286)
Q Consensus 106 g~~~~~~~~~v~~~sG~~-a~~~~l~a~~~~--Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~ 182 (286)
|++.+. .+|++|+|++ ++.+++.+++++ ||+|+++.+.|.++. ..+...|.+++.+++ +.+ ..+
T Consensus 77 g~~~~~--~~i~~t~g~~~al~~~~~~~~~~~~gd~vl~~~p~~~~~~--------~~~~~~g~~~~~~~~--~~~-~~~ 143 (376)
T 3ezs_A 77 KIELKE--NELISTLGSREVLFNFPSFVLFDYQNPTIAYPNPFYQIYE--------GAAKFIKAKSLLMPL--TKE-NDF 143 (376)
T ss_dssp SCCCCG--GGEEEESSSHHHHHHHHHHHTTTCSSCEEEEEESCCTHHH--------HHHHHTTCEEEEEEC--CGG-GTS
T ss_pred CCCCCH--HHEEECcCcHHHHHHHHHHHcCCCCCCEEEEecCCcHhHH--------HHHHHcCCEEEEccc--CCC-CCc
Confidence 983221 3599999999 888799999999 999999996665543 244556766666654 322 223
Q ss_pred CHHHHHHHhhhcCCcEEEEc-CCC-CCCccC---HHHHHHHHHhcCCEEEEeccccccccccCCCCC-C--------CCc
Q 023191 183 DYDQLEKSATLFRPKLIVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVIPS-P--------FEY 248 (286)
Q Consensus 183 d~e~l~~~i~~~~tk~v~i~-~~n-~g~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~-~--------~~~ 248 (286)
++ ++++.+.+ ++++|+++ ++| +|...+ +++|+++|++||+++|+|++|+........... . ..+
T Consensus 144 ~~-~l~~~~~~-~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (376)
T 3ezs_A 144 TP-SLNEKELQ-EVDLVILNSPNNPTGRTLSLEELISWVKLALKHDFILINDECYSEIYENTPPPSLLEACMLAGNEAFK 221 (376)
T ss_dssp CC-CCCHHHHH-HCSEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBSSSCCCCHHHHHHHTTCTTCT
T ss_pred ch-hHHhhhcc-CCCEEEEcCCCCCcCCCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCHHHccccccccccC
Confidence 33 66677776 89999997 666 666665 667888899999999999998754332211100 0 113
Q ss_pred ceEEEeCCCCCCC--CCCceEEEEecchhhhhc
Q 023191 249 ADVVTTTTHKSLR--GPRGAMIFFRKGVKEINK 279 (286)
Q Consensus 249 ~D~v~~s~~K~l~--gp~gG~l~~~~~~~~~~~ 279 (286)
.++++.|++|+++ |.+.|+++.++++.+..+
T Consensus 222 ~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~ 254 (376)
T 3ezs_A 222 NVLVIHSLSKRSSAPGLRSGFIAGDSRLLEKYK 254 (376)
T ss_dssp TEEEEEESTTTTTCGGGCCEEEEECHHHHHHHH
T ss_pred cEEEEecchhccCCccceeEEEeeCHHHHHHHH
Confidence 6799999999984 334499999888776655
No 79
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=99.85 E-value=3.5e-21 Score=175.21 Aligned_cols=202 Identities=15% Similarity=0.157 Sum_probs=136.8
Q ss_pred HHHHHHhcccccc-CCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEE---eCCChHHHHHHHHHhcCC
Q 023191 60 VSVMQAVGSVMTN-KYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQ---SLSGSPSNFQVYTALLKP 135 (286)
Q Consensus 60 ~~v~~a~~~~l~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~---~~sG~~a~~~~l~a~~~~ 135 (286)
..|++++.+.... .+. +......|+. .+..+ +++.+++++|.+. .++ +++|+.++.+++.++++|
T Consensus 32 ~~vl~a~~~~~~~~~~~-~~~~~~~y~~-~~~~~----Le~~lA~l~g~e~-----alv~p~~~sGt~Ai~~al~all~~ 100 (409)
T 3jzl_A 32 AKVLDAFQENKVSDFHF-HPSTGYGYDD-EGRDT----LERVYATVFKTEA-----ALVRPQIISGTHAISTVLFGILRP 100 (409)
T ss_dssp HHHHHHHHHTTCCGGGG-CCCCTTCTTC-HHHHH----HHHHHHHHHTCSE-----EEEETTSCSHHHHHHHHHHHHCCT
T ss_pred HHHHHHHHHhhhhhhcc-CCCcCCCCCh-hHHHH----HHHHHHHHhCCCc-----EEEECCCccHHHHHHHHHHHhcCC
Confidence 6678888765421 111 1111111222 23334 4478889999865 244 456655888899999999
Q ss_pred CCeEEecc-CCCCcccCcccc--ccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEcC----CC--C
Q 023191 136 HDRIMALD-LPHGGHLSHGYQ--TDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGA----SA--Y 206 (286)
Q Consensus 136 Gd~Vl~~~-~~~~~~~~~~~~--~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~~----~n--~ 206 (286)
||+|++++ +.|.++....-. .....+...|..++.+ +.+ +++.+|++++++++++ +||+|+++. ++ +
T Consensus 101 GD~Vl~~~~~~y~~~~~~~~~~g~~~~~l~~~G~~~~~v--~~~-~~g~~d~e~l~~ai~~-~tklV~i~~s~g~p~npt 176 (409)
T 3jzl_A 101 DDELLYITGQPYDTLEEIVGIRKQGQGSLKDFHIGYSSV--PLL-ENGDVDFPRIAKKMTP-KTKMIGIQRSRGYADRPS 176 (409)
T ss_dssp TCEEEECSSSCCTTHHHHHTSSSSSSSCTGGGTCEEEEC--CCC-TTSCCCHHHHHHHCCT-TEEEEEEECSCTTSSSCC
T ss_pred CCEEEEeCCCCcHhHHHHHhcccchhhHHHHcCCEEEEe--CCC-CCCCcCHHHHHHhccC-CCeEEEEECCCCCCCCCc
Confidence 99999998 777665421100 0001223345555444 444 4688999999999987 899999864 44 5
Q ss_pred CCccCHHHHHHHHHh--cCCEEEEeccccccccccCCCCCCCC-cceEEEeCCCCCCCC---CCceEEEEecchhhhhcc
Q 023191 207 ARLYDYERIRKVCNK--QKAIMLADMAHISGLVAAGVIPSPFE-YADVVTTTTHKSLRG---PRGAMIFFRKGVKEINKQ 280 (286)
Q Consensus 207 g~~~~l~~I~~ia~~--~~~~vivD~a~~~g~~~~~~~~~~~~-~~D~v~~s~~K~l~g---p~gG~l~~~~~~~~~~~~ 280 (286)
|...++++|+++|++ ||+++++|++|+.+.... .+.. ++|++++|+||+++| +.||++++++++.+..++
T Consensus 177 g~v~~l~~I~~la~~~~~~~~livD~a~~~~~~~~----~p~~~g~Div~~S~sK~lgg~~~~~GG~v~~~~~li~~l~~ 252 (409)
T 3jzl_A 177 FTIEKIKEMIVFVKNINPEVIVFVDNCYGEFVEYQ----EPPEVGADIIAGSLIKNPGGGLAKTGGYIAGKEALVDLCGY 252 (409)
T ss_dssp CCHHHHHHHHHHHHHHCTTCEEEEECTTCTTTSSC----CSGGGTCSEEEEETTSGGGTTTCSSCEEEEECHHHHHHHHH
T ss_pred CccccHHHHHHHHHhhCCCCEEEEeCCcccccccC----CccccCCeEEEECccccCCccCCceEEEEEeCHHHHHHHHH
Confidence 688899999999999 999999999987654321 1222 589999999999977 457999999887766653
No 80
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=99.85 E-value=2.4e-21 Score=173.89 Aligned_cols=211 Identities=13% Similarity=0.173 Sum_probs=148.7
Q ss_pred cCceecCCCCC--CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCC--CCCCCcceeEEeCCCh
Q 023191 47 KGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFR--LDPEKWGVNVQSLSGS 122 (286)
Q Consensus 47 ~~i~L~~~e~~--~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g--~~~~~~~~~v~~~sG~ 122 (286)
+.++|..+++. +++.+++++.+.+.+.. .+|+. . ..++++++++++++.+| ++++ +|++|+|+
T Consensus 25 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~-~~y~~------~--~~~~~~~l~~~l~~~~g~~~~~~----~v~~~~g~ 91 (383)
T 3kax_A 25 ELIHAWIADMDFEVPQPIQTALKKRIEHPI-FGYTL------P--PENIGDIICNWTKKQYNWDIQKE----WIVFSAGI 91 (383)
T ss_dssp CCEECCCSSCSSCCCHHHHHHHHHHHHSCC-CCCCC------C--CTTHHHHHHHHHHHHHCCCCCGG----GEEEESCH
T ss_pred CeeecccccCCCCCCHHHHHHHHHHHhcCC-CCCCC------C--CHHHHHHHHHHHHHHhCCCCChh----hEEEcCCH
Confidence 56888888773 58999999998876521 12322 1 34678888899999999 4443 59999999
Q ss_pred H-HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEE
Q 023191 123 P-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA 201 (286)
Q Consensus 123 ~-a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i 201 (286)
+ ++.+++.+++++||+|+++.+.|.++. ..+...|.+++.++++.+..++.+|++++++.+++ ++++|++
T Consensus 92 ~~a~~~~~~~l~~~gd~vl~~~~~~~~~~--------~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~v~i 162 (383)
T 3kax_A 92 VPALSTSIQAFTKENESVLVQPPIYPPFF--------EMVTTNNRQLCVSPLQKQNDTYAIDFEHLEKQFQQ-GVKLMLL 162 (383)
T ss_dssp HHHHHHHHHHHCCTTCEEEECSSCCHHHH--------HHHHHTTCEEEECCCEEETTEEECCHHHHHHHHTT-TCCEEEE
T ss_pred HHHHHHHHHHhCCCCCEEEEcCCCcHHHH--------HHHHHcCCEEEeccceecCCcEEEcHHHHHHHhCc-CCeEEEE
Confidence 9 887799999999999999996665543 24455676665555432212356999999999965 8999988
Q ss_pred c-CCC-CCCccC---HHHHHHHHHhcCCEEEEeccccccccccCCCCC--CCC----cceEEEeCCCCCCC--CCCceEE
Q 023191 202 G-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVIPS--PFE----YADVVTTTTHKSLR--GPRGAMI 268 (286)
Q Consensus 202 ~-~~n-~g~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~--~~~----~~D~v~~s~~K~l~--gp~gG~l 268 (286)
+ ++| +|...+ +++|+++|++||+++|+|++|+........... .+. ..++++.|+||+++ |.+.|++
T Consensus 163 ~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~ 242 (383)
T 3kax_A 163 CSPHNPIGRVWKKEELTKLGSLCTKYNVIVVADEIHSDIIYADHTHTPFASLSEELAARTITCMAPSKTFNIAGLQASII 242 (383)
T ss_dssp ESSBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCEEE
T ss_pred eCCCCCCCcCcCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCceeHhhcCccccCcEEEEEEChhhccCcchhheEE
Confidence 7 666 666655 666777799999999999998754332211111 011 24488999999874 3344999
Q ss_pred EE-ecchhhhhc
Q 023191 269 FF-RKGVKEINK 279 (286)
Q Consensus 269 ~~-~~~~~~~~~ 279 (286)
++ ++++.+..+
T Consensus 243 ~~~~~~~~~~~~ 254 (383)
T 3kax_A 243 IIPNEKLRQAFT 254 (383)
T ss_dssp ECCCHHHHHHHH
T ss_pred EeCCHHHHHHHH
Confidence 88 456665544
No 81
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=99.85 E-value=3.3e-21 Score=174.33 Aligned_cols=206 Identities=15% Similarity=0.104 Sum_probs=149.1
Q ss_pred cCceecCCCC-C--CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH
Q 023191 47 KGLELIPSEN-F--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP 123 (286)
Q Consensus 47 ~~i~L~~~e~-~--~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~ 123 (286)
+.++|..+++ . +++.+++++.+.+.... .++.. |....+..++++++++++++++|.+ ++++++|++
T Consensus 44 ~~idl~~~~~~~~~~~~~v~~a~~~~~~~~~-~~~~~---~~~~~g~~~~~~~l~~~la~~~g~~------~v~~~~ggt 113 (398)
T 3a2b_A 44 RVLMFGSNSYLGLTTDTRIIKAAQDALEKYG-TGCAG---SRFLNGTLDIHVELEEKLSAYVGKE------AAILFSTGF 113 (398)
T ss_dssp EEEECSCSCTTCGGGCHHHHHHHHHHHHHHC-SCCCS---BTTTTCCCHHHHHHHHHHHHHHTCS------EEEEESSHH
T ss_pred eEEEeecccccCCCCCHHHHHHHHHHHHHcC-CCCCC---cCcccCCcHHHHHHHHHHHHHhCCC------cEEEECCHH
Confidence 4678888865 2 68999999988775421 12211 1222334467777889999999874 388888888
Q ss_pred -HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhc---CCcEE
Q 023191 124 -SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF---RPKLI 199 (286)
Q Consensus 124 -a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~---~tk~v 199 (286)
++..++.+++++||.|+++++.|+++.. .+...|.+++.++ . +|++++++.+++. ++++|
T Consensus 114 ~a~~~~~~~~~~~gd~V~~~~p~~~~~~~--------~~~~~g~~~~~v~--~------~d~~~l~~~l~~~~~~~~~~v 177 (398)
T 3a2b_A 114 QSNLGPLSCLMGRNDYILLDERDHASIID--------GSRLSFSKVIKYG--H------NNMEDLRAKLSRLPEDSAKLI 177 (398)
T ss_dssp HHHHHHHHHSSCTTCEEEEETTCCHHHHH--------HHHHSSSEEEEEC--T------TCHHHHHHHHHTSCSSSCEEE
T ss_pred HHHHHHHHHHhCCCCEEEECCccCHHHHH--------HHHHcCCceEEeC--C------CCHHHHHHHHHhhccCCceEE
Confidence 8888999999999999999966665543 3445665554443 2 5899999999764 68898
Q ss_pred EEc-CCC-CCCccCHHHHHHHHHhcCCEEEEecccccccccc-CCC--C-CCCC-cceEEEeCCCCCCCCCCceEEEEec
Q 023191 200 VAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAA-GVI--P-SPFE-YADVVTTTTHKSLRGPRGAMIFFRK 272 (286)
Q Consensus 200 ~i~-~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~-~~~--~-~~~~-~~D~v~~s~~K~l~gp~gG~l~~~~ 272 (286)
+++ ++| +|...++++|.++|++||+++|+|++|+.+.... +.. . ..+. .+|++++|+||+|+ |.||++++++
T Consensus 178 ~~~~~~nptG~~~~~~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~-~~GG~~~~~~ 256 (398)
T 3a2b_A 178 CTDGIFSMEGDIVNLPELTSIANEFDAAVMVDDAHSLGVIGHKGAGTASHFGLNDDVDLIMGTFSKSLA-SLGGFVAGDA 256 (398)
T ss_dssp EEESBCTTTCCBCCHHHHHHHHHHHTCEEEEECTTTTTTSSGGGCCHHHHHTCGGGCSEEEEESSSTTC-SSCEEEEECH
T ss_pred EEeCCCCCCCCccCHHHHHHHHHHcCcEEEEECCCcccccCCCCCchHhhcCCCcCCeEEEeccccccc-CCCcEEEeCH
Confidence 887 555 6788899999999999999999999998664421 110 0 0111 26999999999886 6669999998
Q ss_pred chhhhhc
Q 023191 273 GVKEINK 279 (286)
Q Consensus 273 ~~~~~~~ 279 (286)
++.+..+
T Consensus 257 ~~~~~l~ 263 (398)
T 3a2b_A 257 DVIDFLK 263 (398)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8766554
No 82
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=99.85 E-value=1.1e-20 Score=172.76 Aligned_cols=207 Identities=15% Similarity=0.128 Sum_probs=147.4
Q ss_pred CceecCCCC---CCCHHHHHHhccccccCCCCCCCCCcc-cCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH
Q 023191 48 GLELIPSEN---FTSVSVMQAVGSVMTNKYSEGYPGARY-YGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP 123 (286)
Q Consensus 48 ~i~L~~~e~---~~~~~v~~a~~~~l~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~ 123 (286)
.++|..+++ ..++.+++++.+.+.. +..++++.+. ++.. ....++++.+++++|.+. .+++++|+.
T Consensus 66 ~id~~~~~~lg~~~~~~v~~a~~~~~~~-~~~~~~~~~~~~G~~----~~~~~l~~~la~~~g~~~-----~i~~~sGs~ 135 (427)
T 2w8t_A 66 TILLGTYNYMGMTFDPDVIAAGKEALEK-FGSGTCGSRMLNGTF----HDHMEVEQALRDFYGTTG-----AIVFSTGYM 135 (427)
T ss_dssp EEECSCCCTTCGGGCHHHHHHHHHHHHH-HCSCCCSCTTTTCCC----HHHHHHHHHHHHHHTCSE-----EEEESCHHH
T ss_pred EEEEECcccccCCCCHHHHHHHHHHHHH-hCCCCcccccccCCc----HHHHHHHHHHHHHhCCCc-----eEEecCcHH
Confidence 357777764 3689999999888765 2223332221 2222 333445577888888752 588888888
Q ss_pred HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhc---CCcEEE
Q 023191 124 SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF---RPKLIV 200 (286)
Q Consensus 124 a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~---~tk~v~ 200 (286)
++..++.+++++||.|++..+.|.++.. .+...|.+++.++ ..|+++|++++++. ++++|+
T Consensus 136 a~~~al~~l~~~gd~vl~~~~~h~~~~~--------~~~~~g~~~~~~~--------~~d~~~le~~l~~~~~~~~~~v~ 199 (427)
T 2w8t_A 136 ANLGIISTLAGKGEYVILDADSHASIYD--------GCQQGNAEIVRFR--------HNSVEDLDKRLGRLPKEPAKLVV 199 (427)
T ss_dssp HHHHHHHHHSCTTCEEEEETTCCHHHHH--------HHHHSCSEEEEEC--------TTCHHHHHHHHHTSCSSSCEEEE
T ss_pred HHHHHHHHhcCCCCEEEECCcccHHHHH--------HHHHcCCeeEEeC--------CCCHHHHHHHHHhccCCCCeEEE
Confidence 8887889999999999999977766543 3445565544332 25899999999764 688998
Q ss_pred Ec-CCC-CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCC----CCC-CcceEEEeCCCCCCCCCCceEEEEecc
Q 023191 201 AG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIP----SPF-EYADVVTTTTHKSLRGPRGAMIFFRKG 273 (286)
Q Consensus 201 i~-~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~----~~~-~~~D~v~~s~~K~l~gp~gG~l~~~~~ 273 (286)
++ +.| +|...|+++|.++|++||+++|+|++|+.+........ ..+ .++|++++|+||+|+ +.||+++++++
T Consensus 200 ~~~~~n~tG~~~~l~~l~~l~~~~g~~li~Dea~~~~~~~~~g~~~~~~~~~~~~~di~~~s~sK~~g-~~gG~v~~~~~ 278 (427)
T 2w8t_A 200 LEGVYSMLGDIAPLKEMVAVAKKHGAMVLVDEAHSMGFFGPNGRGVYEAQGLEGQIDFVVGTFSKSVG-TVGGFVVSNHP 278 (427)
T ss_dssp EESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTTTTSSTTSCCHHHHTTCTTCCSEEEEESSSTTC-SCCEEEEECCT
T ss_pred EcCCCCCCCCccCHHHHHHHHHHcCCEEEEECCccccccCCCCCchHhhcCCCcCCcEEEecchhhhc-cCCCEEEeCHH
Confidence 87 434 67888999999999999999999999988765411000 111 147999999999985 77899999998
Q ss_pred hhhhhccC
Q 023191 274 VKEINKQG 281 (286)
Q Consensus 274 ~~~~~~~~ 281 (286)
+.+.++..
T Consensus 279 l~~~l~~~ 286 (427)
T 2w8t_A 279 KFEAVRLA 286 (427)
T ss_dssp TGGGGGGT
T ss_pred HHHHHHHh
Confidence 88776643
No 83
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=99.85 E-value=8.5e-21 Score=177.79 Aligned_cols=174 Identities=14% Similarity=0.113 Sum_probs=134.8
Q ss_pred CCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-HHHHHHHHhc-------C-CCC------eEEeccCCCCcc
Q 023191 85 GGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALL-------K-PHD------RIMALDLPHGGH 149 (286)
Q Consensus 85 ~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l~a~~-------~-~Gd------~Vl~~~~~~~~~ 149 (286)
...+...++++++++++++++|.+.+ ++++++|++ +++.++.++. + +|| .|++++..|.++
T Consensus 141 ~~s~~~~~le~~~~~~la~l~g~~~~----~~~~t~ggtea~~~al~~ar~~~~~~~~~~G~~~~~~~~vl~s~~~h~s~ 216 (515)
T 2jis_A 141 EIAPVFVLMEEEVLRKLRALVGWSSG----DGIFCPGGSISNMYAVNLARYQRYPDCKQRGLRTLPPLALFTSKECHYSI 216 (515)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHTCSSC----EEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTHH
T ss_pred hhchHHHHHHHHHHHHHHHHhCCCCC----CeEEcCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCCccHHH
Confidence 44466788999999999999999743 589999988 8776766652 2 576 788888777776
Q ss_pred cCcccccccccccccee---eeEEEecccCCCCCCCCHHHHHHHhhhc-----CCcEEEEc-CCC-CCCccCHHHHHHHH
Q 023191 150 LSHGYQTDTKKISAVSI---FFETMPYRLNESTGYIDYDQLEKSATLF-----RPKLIVAG-ASA-YARLYDYERIRKVC 219 (286)
Q Consensus 150 ~~~~~~~~~~~~~~~g~---~~~~v~~~~~~~~~~~d~e~l~~~i~~~-----~tk~v~i~-~~n-~g~~~~l~~I~~ia 219 (286)
.... ...|. .++.+| .+ +++.+|+++|++++++. +|++|+++ ++| +|.+.|+++|+++|
T Consensus 217 ~~~~--------~~~g~g~~~v~~v~--~~-~~~~~d~~~L~~~i~~~~~~g~~~~~Vv~~~~~n~tG~i~~l~~I~~la 285 (515)
T 2jis_A 217 QKGA--------AFLGLGTDSVRVVK--AD-ERGKMVPEDLERQIGMAEAEGAVPFLVSATSGTTVLGAFDPLEAIADVC 285 (515)
T ss_dssp HHHH--------HHTTSCGGGEEEEC--BC-TTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHH
T ss_pred HHHH--------HHcCCCCCcEEEEe--cC-CCCcCCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCCCccCHHHHHHHH
Confidence 5432 23333 455565 44 46899999999999763 48888887 656 78899999999999
Q ss_pred HhcCCEEEEeccccccccccCCCCC---CCCcceEEEeCCCCCCCCCCc-eEEEEecc
Q 023191 220 NKQKAIMLADMAHISGLVAAGVIPS---PFEYADVVTTTTHKSLRGPRG-AMIFFRKG 273 (286)
Q Consensus 220 ~~~~~~vivD~a~~~g~~~~~~~~~---~~~~~D~v~~s~~K~l~gp~g-G~l~~~~~ 273 (286)
++||+++|+|++|+.+....+.... .+.++|++++++|||+++|.| |+++++++
T Consensus 286 ~~~g~~l~vD~a~~~~~~~~~~~~~~~~g~~~aD~v~~s~hK~l~~p~g~G~l~~~~~ 343 (515)
T 2jis_A 286 QRHGLWLHVDAAWGGSVLLSQTHRHLLDGIQRADSVAWNPHKLLAAGLQCSALLLQDT 343 (515)
T ss_dssp HHHTCEEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCSCCEEEEESCC
T ss_pred HHcCCeEEEehhhhhHHHhChhhHhhcCCCccCCEEEECcccccCCCCCeeEEEEeCh
Confidence 9999999999999888776442221 223589999999999999998 99999987
No 84
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=99.85 E-value=8.1e-21 Score=171.16 Aligned_cols=187 Identities=12% Similarity=0.132 Sum_probs=138.0
Q ss_pred CHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChHHHHHHHHHh-cCCCC
Q 023191 59 SVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTAL-LKPHD 137 (286)
Q Consensus 59 ~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~a~~~~l~a~-~~~Gd 137 (286)
++++++++.+.+.... .+ |.......+++ +.+++++|.+. .|++++|+.++.+++.++ +++||
T Consensus 16 ~~~~~~a~~~~l~~~~-~~------~~~~~~~~~l~----~~la~~~~~~~-----~i~~~sGt~al~~~l~~l~~~~gd 79 (388)
T 1b9h_A 16 DDAERNGLVRALEQGQ-WW------RMGGDEVNSFE----REFAAHHGAAH-----ALAVTNGTHALELALQVMGVGPGT 79 (388)
T ss_dssp CHHHHHHHHHHHHTSC-CB------TTTCSHHHHHH----HHHHHHTTCSE-----EEEESCHHHHHHHHHHHTTCCTTC
T ss_pred CHHHHHHHHHHHHcCC-ee------ecCCHHHHHHH----HHHHHHhCCCe-----EEEeCCHHHHHHHHHHHcCCCCcC
Confidence 4899999988886521 01 22234455555 77778888762 599999955888799999 89999
Q ss_pred eEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCC-CCCccCHHHHH
Q 023191 138 RIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASA-YARLYDYERIR 216 (286)
Q Consensus 138 ~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~~~n-~g~~~~l~~I~ 216 (286)
+|+++.+.|.++.. .+...|.+++.++ ++++++.+|+++|++++++ ++++|+ ++| +|...++++|.
T Consensus 80 ~Vi~~~~~~~~~~~--------~~~~~g~~~~~v~--~~~~~~~~d~~~l~~~i~~-~~~~v~--~~n~tG~~~~l~~i~ 146 (388)
T 1b9h_A 80 EVIVPAFTFISSSQ--------AAQRLGAVTVPVD--VDAATYNLDPEAVAAAVTP-RTKVIM--PVHMAGLMADMDALA 146 (388)
T ss_dssp EEEEESSSCTHHHH--------HHHHTTCEEEEEC--BCTTTCCBCHHHHHHHCCT-TEEEEC--CBCGGGCCCCHHHHH
T ss_pred EEEECCCccHHHHH--------HHHHcCCEEEEEe--cCCCcCCCCHHHHHHhcCc-CceEEE--EeCCccCcCCHHHHH
Confidence 99999977777643 3345665555554 5544588999999999987 888877 555 78889999999
Q ss_pred HHHHhcCCEEEEeccccccccccCCCCCCCCcceEEEeCCCCCCCCCCceEEEEecc-h
Q 023191 217 KVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKG-V 274 (286)
Q Consensus 217 ~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~gG~l~~~~~-~ 274 (286)
++|++||+++|+|++|+.|....+.....+..+++..+|.||+++|++||+++++++ +
T Consensus 147 ~la~~~~~~li~D~a~~~g~~~~~~~~~~~~~i~~~S~s~~K~l~g~~~G~~~~~~~~~ 205 (388)
T 1b9h_A 147 KISADTGVPLLQDAAHAHGARWQGKRVGELDSIATFSFQNGKLMTAGEGGAVVFPDGET 205 (388)
T ss_dssp HHHHHHTCCBCEECTTCTTCEETTEEGGGSSSCEEEECCTTSSSCSSSCEEEEECTTCH
T ss_pred HHHHHcCCEEEEecchhcCCccCCeecccccceEEEEccCCCcccCCCeEEEEECCHHH
Confidence 999999999999999988765432211111125566667789998888999999876 5
No 85
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=99.85 E-value=2.6e-21 Score=174.68 Aligned_cols=196 Identities=16% Similarity=0.157 Sum_probs=139.5
Q ss_pred HcCceecCCCCCCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChHHH
Q 023191 46 WKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSN 125 (286)
Q Consensus 46 ~~~i~L~~~e~~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~a~ 125 (286)
.+.++|..+.+..++.+++++.+.+...+ |. ....+..+++ +.+++++|.+. .+++++|+.++
T Consensus 22 ~~~~~l~~~~p~~~~~~~~a~~~~~~~~~---~~-----~~~~~~~~l~----~~la~~~~~~~-----~i~~~~gt~al 84 (391)
T 3dr4_A 22 SDLPRISVAAPRLDGNERDYVLECMDTTW---IS-----SVGRFIVEFE----KAFADYCGVKH-----AIACNNGTTAL 84 (391)
T ss_dssp ------CCCCCCCCSSHHHHHHHHHHHTC---CS-----SCSHHHHHHH----HHHHHHHTCSE-----EEEESSHHHHH
T ss_pred CCCceeccCCCCCCHHHHHHHHHHHHcCC---cc-----CCChHHHHHH----HHHHHHhCCCc-----EEEeCCHHHHH
Confidence 35678888888888999999988776522 11 1234555555 67777778763 35555555588
Q ss_pred HHHHHHh-cCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEcCC
Q 023191 126 FQVYTAL-LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGAS 204 (286)
Q Consensus 126 ~~~l~a~-~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~~~ 204 (286)
.+++.++ +++||+|+++++.|.++.. .+...|.+++.++ .+++++.+|++++++++++ ++++|++ +
T Consensus 85 ~~~l~~~~~~~gd~vl~~~~~~~~~~~--------~~~~~g~~~~~~~--~~~~~~~~d~~~l~~~~~~-~~~~v~~--~ 151 (391)
T 3dr4_A 85 HLALVAMGIGPGDEVIVPSLTYIASAN--------SVTYCGATPVLVD--NDPRTFNLDAAKLEALITP-RTKAIMP--V 151 (391)
T ss_dssp HHHHHHHTCCTTCEEEEESSSCTHHHH--------HHHHTTCEEEEEC--BCTTTCSBCGGGSGGGCCT-TEEEECC--B
T ss_pred HHHHHHcCCCCcCEEEECCCchHHHHH--------HHHHCCCEEEEEe--cCccccCcCHHHHHHhcCC-CceEEEE--E
Confidence 8789999 9999999999977766643 3345565555554 5545689999999999987 8888875 3
Q ss_pred C-CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCCcceEEEeC--CCCCCCCCCceEEEEecc
Q 023191 205 A-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTT--THKSLRGPRGAMIFFRKG 273 (286)
Q Consensus 205 n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s--~~K~l~gp~gG~l~~~~~ 273 (286)
| +|...++++|.++|+++|+++|+|++|+.|....+.....+ .|++++| .||+++|++||+++++++
T Consensus 152 n~tG~~~~~~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~~~--~di~~~S~s~~K~l~~g~gg~~~~~~~ 221 (391)
T 3dr4_A 152 HLYGQICDMDPILEVARRHNLLVIEDAAEAVGATYRGKKSGSL--GDCATFSFFGNAIITTGEGGMITTNDD 221 (391)
T ss_dssp CGGGCCCCHHHHHHHHHHTTCEEEEECTTCTTCEETTEETTSS--SSEEEEECBTTSSSCCBSCEEEEESCH
T ss_pred CCCCChhhHHHHHHHHHHcCCEEEEECcccccceECCeeeccc--CCEEEEECCCCCcCCcCCeEEEEECCH
Confidence 4 67889999999999999999999999998876544322222 3555555 779998888899888764
No 86
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=99.85 E-value=4e-21 Score=173.71 Aligned_cols=212 Identities=13% Similarity=0.169 Sum_probs=150.1
Q ss_pred cCceecCCCC--CCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCC--CCCCcceeEEeCCCh
Q 023191 47 KGLELIPSEN--FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRL--DPEKWGVNVQSLSGS 122 (286)
Q Consensus 47 ~~i~L~~~e~--~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~--~~~~~~~~v~~~sG~ 122 (286)
+.++|..+++ ++++.+.+++.+.+.+.. .+| +.. ..++++++.+++++.+|. +++ +|++|+|+
T Consensus 32 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~-~~y------~~~--~~~l~~~la~~l~~~~g~~~~~~----~v~~t~g~ 98 (399)
T 1c7n_A 32 EVVPLSVADMEFKNPPELIEGLKKYLDETV-LGY------TGP--TEEYKKTVKKWMKDRHQWDIQTD----WIINTAGV 98 (399)
T ss_dssp TCCCCCSSSCSSCCCHHHHHHHHHHHHHCC-CSS------BCC--CHHHHHHHHHHHHHHHCCCCCGG----GEEEESSH
T ss_pred CceeeeecCCCCCCCHHHHHHHHHHHhcCC-CCC------CCC--cHHHHHHHHHHHHHHhCCCCChh----hEEEcCCH
Confidence 5788988877 358899999988775311 122 221 578888898999888884 443 59999999
Q ss_pred H-HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEE
Q 023191 123 P-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA 201 (286)
Q Consensus 123 ~-a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i 201 (286)
+ ++.+++.+++++||+|+++.+.|.++.. .+...|.+++.+++..+..++.+|+++|++.+++.++++|++
T Consensus 99 ~~a~~~~~~~l~~~gd~vl~~~p~~~~~~~--------~~~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~~~~~~v~~ 170 (399)
T 1c7n_A 99 VPAVFNAVREFTKPGDGVIIITPVYYPFFM--------AIKNQERKIIECELLEKDGYYTIDFQKLEKLSKDKNNKALLF 170 (399)
T ss_dssp HHHHHHHHHHHCCTTCEEEECSSCCTHHHH--------HHHTTTCEEEECCCEEETTEEECCHHHHHHHHTCTTEEEEEE
T ss_pred HHHHHHHHHHhcCCCCEEEEcCCCcHhHHH--------HHHHcCCEEEecccccCCCCEEEcHHHHHHHhccCCCcEEEE
Confidence 8 8888999999999999999966655432 344556555555432111135699999999998338899988
Q ss_pred c-CCC-CCCccC---HHHHHHHHHhcCCEEEEeccccccccccCCCC--CCCC----cceEEEeCCCCCCC--CCCceEE
Q 023191 202 G-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVIP--SPFE----YADVVTTTTHKSLR--GPRGAMI 268 (286)
Q Consensus 202 ~-~~n-~g~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~--~~~~----~~D~v~~s~~K~l~--gp~gG~l 268 (286)
+ ++| +|...+ +++|+++|++||+++|+|++|+.......... ..+. ..++++.|++|+|+ |.+.|++
T Consensus 171 ~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~ 250 (399)
T 1c7n_A 171 CSPHNPVGRVWKKDELQKIKDIVLKSDLMLWSDEIHFDLIMPGYEHTVFQSIDEQLADKTITFTAPSKTFNIAGMGMSNI 250 (399)
T ss_dssp ESSBTTTTBCCCHHHHHHHHHHHHHSSCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCEEE
T ss_pred cCCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCcccHHHcCccccCcEEEEEeChhhccccchheEEE
Confidence 7 666 677777 99999999999999999999876433211110 0111 24688999999884 3345999
Q ss_pred EEec-chhhhhc
Q 023191 269 FFRK-GVKEINK 279 (286)
Q Consensus 269 ~~~~-~~~~~~~ 279 (286)
++++ ++.+..+
T Consensus 251 ~~~~~~~~~~l~ 262 (399)
T 1c7n_A 251 IIKNPDIRERFT 262 (399)
T ss_dssp ECCCHHHHHHHH
T ss_pred EECCHHHHHHHH
Confidence 9975 4665544
No 87
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=99.85 E-value=6.5e-21 Score=171.86 Aligned_cols=195 Identities=10% Similarity=0.090 Sum_probs=135.4
Q ss_pred ceecCCCCCCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHH-HHHCCCCCCCcceeEEeCCChHHHHH
Q 023191 49 LELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRA-LEAFRLDPEKWGVNVQSLSGSPSNFQ 127 (286)
Q Consensus 49 i~L~~~e~~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~g~~~~~~~~~v~~~sG~~a~~~ 127 (286)
|.+...+-++++++++++.+.+.+.+ +. .......++| +.+ ++++|... . .|.+++|+.++.+
T Consensus 5 i~~~~p~~~~~~~i~~a~~~~~~~~~---~~-----~~~~~~~~l~----~~~~a~~~g~~~-~---~v~~~sgt~al~~ 68 (377)
T 3ju7_A 5 IPFLRASTVPVIEYLDELKEIDASHI---YT-----NYGPINQRFE----QTIMSGFFQNRG-A---VTTVANATLGLMA 68 (377)
T ss_dssp BCSCCCCCCCGGGGHHHHHHHHHHTC---CS-----SSCHHHHHHH----HHHHHHTSTTCS-E---EEEESCHHHHHHH
T ss_pred eeccCCCCCCcHHHHHHHHHHHHcCC---cc-----cCCHHHHHHH----HHHHHHHhCCCC-e---EEEeCCHHHHHHH
Confidence 55544444567888999988887633 10 1123445555 777 88888322 1 3555555557777
Q ss_pred HHHHh-cCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHh-hhcC--CcEEEEcC
Q 023191 128 VYTAL-LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSA-TLFR--PKLIVAGA 203 (286)
Q Consensus 128 ~l~a~-~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i-~~~~--tk~v~i~~ 203 (286)
++.++ ++|||+|+++++.|.++.. .+...|.+++.++ ++++++.+|++++++++ ++ + ||+|+.
T Consensus 69 al~~l~~~~Gd~Vi~~~~~~~~~~~--------~~~~~G~~~~~v~--~~~~~~~~d~~~l~~~i~~~-~~~tk~v~~-- 135 (377)
T 3ju7_A 69 AIQLKKRKKGKYALMPSFTFPATPL--------AAIWCGLEPYFID--ISIDDWYMDKTVLWDKIEEL-KEEVAIVVP-- 135 (377)
T ss_dssp HHHHHSCTTCCEEEEESSSCTHHHH--------HHHHTTCEEEEEC--BCTTTCSBCHHHHHHHHHHH-GGGEEEECC--
T ss_pred HHHHcCCCCcCEEEECCCCcHHHHH--------HHHHcCCEEEEEe--cCCccCCcCHHHHHHHHhcC-CCCceEEEE--
Confidence 88888 9999999999977776543 3345676565554 55567899999999988 55 6 888874
Q ss_pred CC-CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCC-CCCCcceEEEeCCCCCCCCCCceEEEEecc
Q 023191 204 SA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIP-SPFEYADVVTTTTHKSLRGPRGAMIFFRKG 273 (286)
Q Consensus 204 ~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~-~~~~~~D~v~~s~~K~l~gp~gG~l~~~~~ 273 (286)
.| +|...++++|.++|+ ||++||+|++|+.|....+... ..+...++..++.||+++++.||+++++++
T Consensus 136 ~~~~G~~~~~~~i~~la~-~~~~vi~D~a~a~g~~~~~~~~g~~~~d~~~~S~~~~K~l~~g~gG~~~~~~~ 206 (377)
T 3ju7_A 136 YATFGSWMNLEEYEELEK-KGVPVVVDAAPGFGLMNGGMHYGQDFSGMIIYSFHATKPFGIGEGGLIYSKNE 206 (377)
T ss_dssp BCGGGBCCCCHHHHHHHH-TTCCBEEECTTCTTCEETTEETTTTCSSEEEEECBTTSSSCCBSCEEEEESCH
T ss_pred ECCCCCccCHHHHHHHHh-cCCEEEEECCCccCCeECCEeccCCCCcEEEEECCCCCcCCCCCcEEEEECCH
Confidence 33 688889999999999 9999999999998876433222 111123344555789998877799988763
No 88
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=99.85 E-value=5.9e-21 Score=174.64 Aligned_cols=204 Identities=16% Similarity=0.095 Sum_probs=143.1
Q ss_pred cCceecCCCC------CCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCC--CCCCCcceeEEe
Q 023191 47 KGLELIPSEN------FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFR--LDPEKWGVNVQS 118 (286)
Q Consensus 47 ~~i~L~~~e~------~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g--~~~~~~~~~v~~ 118 (286)
+.|+|..|.+ ++++.+++++.+.+......+ |+...+..++++++.+++.+. + ++++ +|++
T Consensus 55 ~~i~l~~g~~~~~g~~~~~~~v~~a~~~~~~~~~~~~------y~~~~g~~~lr~~la~~~~~~-~~~~~~~----~v~~ 123 (427)
T 3dyd_A 55 TMISLSIGDPTVFGNLPTDPEVTQAMKDALDSGKYNG------YAPSIGFLSSREEIASYYHCP-EAPLEAK----DVIL 123 (427)
T ss_dssp CCEECCCSCTTTTSSSCCCHHHHHHHHHHHHHCCSSS------CCCTTCCHHHHHHHHHHHCBT-TBCCCGG----GEEE
T ss_pred CEEeCCCcCCCccCCCCCCHHHHHHHHHHHhcCcCCC------CCCCCCcHHHHHHHHHHHhhc-CCCCChH----HEEE
Confidence 4589987764 578999999998876522112 333455667775555554332 2 3443 5999
Q ss_pred CCChH-HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCc
Q 023191 119 LSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPK 197 (286)
Q Consensus 119 ~sG~~-a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk 197 (286)
|+|++ ++.+++.++++|||+|+++++.|.++ ...+...|.+++.+++..+ +++.+|++++++.+++ +++
T Consensus 124 t~g~t~al~~~~~~l~~~gd~vl~~~p~~~~~--------~~~~~~~g~~~~~~~~~~~-~~~~~d~~~l~~~l~~-~~~ 193 (427)
T 3dyd_A 124 TSGCSQAIDLCLAVLANPGQNILVPRPGFSLY--------KTLAESMGIEVKLYNLLPE-KSWEIDLKQLEYLIDE-KTA 193 (427)
T ss_dssp ESSHHHHHHHHHHHHCCTTCEEEEEESCCTHH--------HHHHHHTTCEEEEEEEEGG-GTTEECHHHHHSSCCT-TEE
T ss_pred ecCcHHHHHHHHHHhcCCCCEEEEcCCCchhH--------HHHHHHcCCEEEEEecccc-cCCCCCHHHHHHHhcc-CCC
Confidence 99999 88889999999999999999555443 3345566766666665322 4678999999999987 788
Q ss_pred EEEEc-CCC-CCCccC---HHHHHHHHHhcCCEEEEeccccccccccCCCCCCCC--c---ceEEEeCCCCCCCCC--Cc
Q 023191 198 LIVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFE--Y---ADVVTTTTHKSLRGP--RG 265 (286)
Q Consensus 198 ~v~i~-~~n-~g~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~--~---~D~v~~s~~K~l~gp--~g 265 (286)
+|+++ ++| +|...+ +++|+++|+++|+++|+|++|.......... ..+. . ..+++.|++|.|+.| +.
T Consensus 194 ~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~i~Deay~~~~~~g~~~-~~~~~~~~~~~vi~~~S~sK~~~~~G~ri 272 (427)
T 3dyd_A 194 CLIVNNPSNPCGSVFSKRHLQKILAVAARQCVPILADEIYGDMVFSDCKY-EPLATLSTDVPILSCGGLAKRWLVPGWRL 272 (427)
T ss_dssp EEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTTTCBCSSCCC-CCGGGGCSSCCEEEEEESTTTSSCGGGCC
T ss_pred EEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcCchhhccCCCcC-ccHHHhCCCCcEEEEeeccccCCCcCcce
Confidence 88887 766 777778 9999999999999999999976533221111 1111 1 236688999986443 45
Q ss_pred eEEEEec
Q 023191 266 AMIFFRK 272 (286)
Q Consensus 266 G~l~~~~ 272 (286)
|++++++
T Consensus 273 G~~~~~~ 279 (427)
T 3dyd_A 273 GWILIHD 279 (427)
T ss_dssp EEEEEEC
T ss_pred EEEEecC
Confidence 9999985
No 89
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=99.85 E-value=5.3e-21 Score=174.82 Aligned_cols=245 Identities=13% Similarity=0.085 Sum_probs=158.5
Q ss_pred chhhccccccccChHHHHHHHHHHHHH-HcCceecCCCCCC--CHHHHHHhccccccCCC-----CCCCCCcccCCcchH
Q 023191 19 WPKQLNAPLEVVDPEIADIIEHEKARQ-WKGLELIPSENFT--SVSVMQAVGSVMTNKYS-----EGYPGARYYGGNEYI 90 (286)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~L~~~e~~~--~~~v~~a~~~~l~~~~~-----~~~~~~~~~~~~~~~ 90 (286)
++++++++++.+.+..+..+.+..... .+.++|..|.+.. +|. ..+...+..... ........|+...+.
T Consensus 3 ~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~p~--~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~ 80 (425)
T 2r2n_A 3 YARFITAASAARNPSPIRTMTDILSRGPKSMISLAGGLPNPNMFPF--KTAVITVENGKTIQFGEEMMKRALQYSPSAGI 80 (425)
T ss_dssp GGGGSCHHHHTCCCCSGGGHHHHHHHSCTTCEECCCCCCCGGGCSE--EEEEEEETTSCCEEECHHHHHHHTSCCCTTCC
T ss_pred hhHHHHHHHhcCCCchHHHHHHHhhcCCCCeEEcCCcCCCchhCCH--HHHHHHHhhcccccccccchhhhcCCCCCCCC
Confidence 445666667667666666666654332 4678998887632 121 111111110000 000000113444666
Q ss_pred HHHHHHHHHHHHHHCCCCCC-------CcceeEEeCCChH-HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccc
Q 023191 91 DMAESLCQKRALEAFRLDPE-------KWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKIS 162 (286)
Q Consensus 91 ~~l~~~~~~~~~~~~g~~~~-------~~~~~v~~~sG~~-a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~ 162 (286)
.++++++.+++++.+|++.+ . .+|++|+|++ ++.+++.++++|||+|++++|.|.++ ...+.
T Consensus 81 ~~lr~~ia~~l~~~~g~~~~~~~~~~~~--~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~--------~~~~~ 150 (425)
T 2r2n_A 81 PELLSWLKQLQIKLHNPPTIHYPPSQGQ--MDLCVTSGSQQGLCKVFEMIINPGDNVLLDEPAYSGT--------LQSLH 150 (425)
T ss_dssp HHHHHHHHHHHHHHHCCTTTTSCGGGTC--EEEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCHHH--------HHHHG
T ss_pred HHHHHHHHHHHHHhcCCCCccccccCCc--CcEEEeCcHHHHHHHHHHHhCCCCCEEEEeCCCcHHH--------HHHHH
Confidence 78999999999998998641 1 2699999999 88879999999999999999555443 33455
Q ss_pred cceeeeEEEecccCCCCCCCCHHHHHHHhhh-----------cCCcEEEE-c-CCC-CCCccCHH---HHHHHHHhcCCE
Q 023191 163 AVSIFFETMPYRLNESTGYIDYDQLEKSATL-----------FRPKLIVA-G-ASA-YARLYDYE---RIRKVCNKQKAI 225 (286)
Q Consensus 163 ~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~-----------~~tk~v~i-~-~~n-~g~~~~l~---~I~~ia~~~~~~ 225 (286)
..|.+++.++ .+ + ..+|+++|++.++. .++++|++ + ++| +|...+.+ +|+++|++||++
T Consensus 151 ~~g~~~~~v~--~~-~-~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~ 226 (425)
T 2r2n_A 151 PLGCNIINVA--SD-E-SGIVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFL 226 (425)
T ss_dssp GGTCEEEEEC--EE-T-TEECHHHHHHHHTTSCSTTSSSTTSCCCSEEEECCSSCTTTCCCCCHHHHHHHHHHHHHTTCE
T ss_pred HcCCEEEEeC--cC-C-CCCCHHHHHHHHHhhhccccccccCCCceEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCE
Confidence 6776666565 44 2 24899999999872 26898877 3 566 67666644 999999999999
Q ss_pred EEEeccccccccccCCCCC--CC--CcceEEEeCCCCCCC-CCCceEEEEecchhhhhc
Q 023191 226 MLADMAHISGLVAAGVIPS--PF--EYADVVTTTTHKSLR-GPRGAMIFFRKGVKEINK 279 (286)
Q Consensus 226 vivD~a~~~g~~~~~~~~~--~~--~~~D~v~~s~~K~l~-gp~gG~l~~~~~~~~~~~ 279 (286)
+|+|++|+........... .+ .+.++++.|++|+|+ |.+.|++++++++.+..+
T Consensus 227 li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~SK~~~~GlRiG~~~~~~~l~~~l~ 285 (425)
T 2r2n_A 227 IIEDDPYYFLQFNKFRVPTFLSMDVDGRVIRADSFSKIISSGLRIGFLTGPKPLIERVI 285 (425)
T ss_dssp EEEECTTGGGBSSSSCCCCTGGGCTTSCEEEEEESTTTTCSTTCCEEEEEEHHHHHHHH
T ss_pred EEEECCcccccCCCCCCCCccccCCCCCEEEEccchhhccCccceEEEecCHHHHHHHH
Confidence 9999998743222111111 01 135688999999985 223499999988766554
No 90
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=99.85 E-value=3.5e-21 Score=175.75 Aligned_cols=215 Identities=13% Similarity=0.116 Sum_probs=153.5
Q ss_pred HcCceecCCCC--CCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH
Q 023191 46 WKGLELIPSEN--FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP 123 (286)
Q Consensus 46 ~~~i~L~~~e~--~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~ 123 (286)
.+.++|..+++ ++++.+++++.+.+.+.. .+|+. ...++++++++++++.+|.+.+. .+|++++|++
T Consensus 61 ~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~-~~y~~--------~~~~l~~~l~~~l~~~~g~~~~~--~~v~~~~g~~ 129 (421)
T 3l8a_A 61 PELLQMWVADMDFLPVPEIKEAIINYGREHI-FGYNY--------FNDDLYQAVIDWERKEHDYAVVK--EDILFIDGVV 129 (421)
T ss_dssp TTCEECCSSCCCSCCCHHHHHHHHHHHHHCC-SSCBC--------CCHHHHHHHHHHHHHHHCCCCCG--GGEEEESCHH
T ss_pred CCeeecccCCCCCCCCHHHHHHHHHHHhcCC-cCCCC--------CCHHHHHHHHHHHHHHhCCCCCH--HHEEEcCCHH
Confidence 36788887766 368999999988876421 12221 12688889999999999843222 3599999999
Q ss_pred -HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc
Q 023191 124 -SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG 202 (286)
Q Consensus 124 -a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~ 202 (286)
++.+++.+++++||+|+++.+.|.++.. .+...|.++..+|+.....++.+|+++|++++++.++++|+++
T Consensus 130 ea~~~a~~~~~~~gd~Vi~~~~~y~~~~~--------~~~~~g~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~vil~ 201 (421)
T 3l8a_A 130 PAISIALQAFSEKGDAVLINSPVYYPFAR--------TIRLNDHRLVENSLQIINGRFEIDFEQLEKDIIDNNVKIYLLC 201 (421)
T ss_dssp HHHHHHHHHHSCTEEEEEEEESCCHHHHH--------HHHHTTEEEEEEECEEETTEEECCHHHHHHHHHHTTEEEEEEE
T ss_pred HHHHHHHHHhcCCCCEEEECCCCcHHHHH--------HHHHCCCEEEeccccccCCCeeeCHHHHHHHhhccCCeEEEEC
Confidence 9888999999999999999966655432 4445676666666542224567899999999984489999987
Q ss_pred -CCC-CCCc---cCHHHHHHHHHhcCCEEEEeccccccccccCCC----CCC--CCcceEEEeCCCCCCC--CCCceEEE
Q 023191 203 -ASA-YARL---YDYERIRKVCNKQKAIMLADMAHISGLVAAGVI----PSP--FEYADVVTTTTHKSLR--GPRGAMIF 269 (286)
Q Consensus 203 -~~n-~g~~---~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~----~~~--~~~~D~v~~s~~K~l~--gp~gG~l~ 269 (286)
++| +|.. .++++|+++|++||+++|+|++|+......... ... ....++++.|++|+|+ |.+.|+++
T Consensus 202 ~p~nptG~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~~~G~~~ 281 (421)
T 3l8a_A 202 SPHNPGGRVWDNDDLIKIAELCKKHGVILVSDEIHQDLALFGNTHHSLNTLDASYKDFTIILSSATKTFNIAGTKNSFAI 281 (421)
T ss_dssp SSBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCTTGGGTEEEEECSHHHHTCGGGCCEEEE
T ss_pred CCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCccHHHcCchhcCcEEEEEeChhhccCchhheEeEE
Confidence 666 6655 568999999999999999999986433221111 111 0125588999999885 33449999
Q ss_pred Ee-cchhhhhc
Q 023191 270 FR-KGVKEINK 279 (286)
Q Consensus 270 ~~-~~~~~~~~ 279 (286)
++ +++.+..+
T Consensus 282 ~~~~~l~~~~~ 292 (421)
T 3l8a_A 282 IQNESLRRKFQ 292 (421)
T ss_dssp CCSHHHHHHHH
T ss_pred cCCHHHHHHHH
Confidence 98 56666554
No 91
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=99.85 E-value=3.3e-21 Score=179.60 Aligned_cols=202 Identities=17% Similarity=0.114 Sum_probs=148.2
Q ss_pred CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-HHHHHHHHhcC--
Q 023191 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLK-- 134 (286)
Q Consensus 58 ~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l~a~~~-- 134 (286)
.++.+.+++.+.+..... .+ ...+....+..++++++++++++++|++.+. .++++++|++ ++.+++.++.+
T Consensus 76 ~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~--~~~~~~~ggt~a~~~a~~a~~~~~ 150 (497)
T 3mc6_A 76 GGDDLIHLQTIAYEKYCV-AN--QLHPDVFPAVRKMESEVVSMVLRMFNAPSDT--GCGTTTSGGTESLLLACLSAKMYA 150 (497)
T ss_dssp CCHHHHHHHHHHHHHTSS-CB--TTCTTTCHHHHHHHHHHHHHHHHHTTCCTTT--CCEEEESSHHHHHHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHhh-cC--CCCcccChHHHHHHHHHHHHHHHHhCCCCCC--CeEEEcCcHHHHHHHHHHHHHHHH
Confidence 357777777766644111 11 1113445677899999999999999997211 2588889988 88878888765
Q ss_pred ---CC---CeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-C
Q 023191 135 ---PH---DRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-Y 206 (286)
Q Consensus 135 ---~G---d~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~-~~n-~ 206 (286)
+| |+|+++.+.|.++.. .+...|.+++.++ .+.+++.+|+++|++++++ +|++|+++ ++| +
T Consensus 151 ~~~~g~~~~~Vi~~~~~h~~~~~--------~~~~~G~~~~~v~--~~~~~~~~d~~~l~~~i~~-~~~~v~~~~p~npt 219 (497)
T 3mc6_A 151 LHHRGITEPEIIAPVTAHAGFDK--------AAYYFGMKLRHVE--LDPTTYQVDLGKVKKFINK-NTVLLVGSAPNFPH 219 (497)
T ss_dssp HHHSCCSSCEEEEETTSCHHHHH--------HHHHSCCEEEEEC--BCTTTCSBCTTTTGGGCCS-SEEEEEEETTCTTT
T ss_pred HhcCCCCCceEEEeCCccHHHHH--------HHHHcCCeEEEEe--cCcccCcCCHHHHHHHHhh-CCEEEEEECCCCCC
Confidence 56 899999966665433 4556677676665 4433689999999999987 89999998 555 7
Q ss_pred CCccCHHHHHHHHHhcCCEEEEeccccccccc----cC---C--CCCCCCcceEEEeCCCCCCCCCCc-eEEEEecchh
Q 023191 207 ARLYDYERIRKVCNKQKAIMLADMAHISGLVA----AG---V--IPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVK 275 (286)
Q Consensus 207 g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~----~~---~--~~~~~~~~D~v~~s~~K~l~gp~g-G~l~~~~~~~ 275 (286)
|...|+++|+++|++||+++|+|++|+.+... .+ . ......++|++++++||++++|.+ |+++++++..
T Consensus 220 G~~~~l~~i~~la~~~g~~livD~a~~~~~~~f~~~~~~~~~~~~~~~~~g~d~~~~s~~K~l~~~~~~g~~~~~~~~~ 298 (497)
T 3mc6_A 220 GIADDIEGLGKIAQKYKLPLHVDSCLGSFIVSFMEKAGYKNLPLLDFRVPGVTSISCDTHKYGFAPKGSSVIMYRNSDL 298 (497)
T ss_dssp CCCCSCTTTTTHHHHTTCCEEEETTTTHHHHGGGTTTTCCSCCCCSTTSTTCCEEEEETTTTTCCCSSCEEEECSSHHH
T ss_pred CcCCCHHHHHHHHHHhCCEEEEECcchhhhhhhhhhhcccCCccccccCCCCcEEEECchhhcCCCCCceeEEecCHHH
Confidence 78899999999999999999999998855443 01 1 111123699999999999888877 9999987643
No 92
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.85 E-value=9.7e-21 Score=170.76 Aligned_cols=213 Identities=10% Similarity=0.054 Sum_probs=148.2
Q ss_pred cCceecCCCC--CCCHHHHHHhccccccCCCCCCCCCcccCCcchHHH-HHHHHHHHHHHHCCCCCCCcceeEEeCCChH
Q 023191 47 KGLELIPSEN--FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDM-AESLCQKRALEAFRLDPEKWGVNVQSLSGSP 123 (286)
Q Consensus 47 ~~i~L~~~e~--~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~ 123 (286)
+.++|..+++ .+++.+.+++.+.+.... .+|+ .. ..+ +++++.+++.+.+|.+.+. .+|++|+|++
T Consensus 29 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~-~~y~------~~--~~~~lr~~la~~l~~~~g~~~~~--~~v~~t~g~~ 97 (390)
T 1d2f_A 29 DLLPFTISDMDFATAPCIIEALNQRLMHGV-FGYS------RW--KNDEFLAAIAHWFSTQHYTAIDS--QTVVYGPSVI 97 (390)
T ss_dssp -CEECCSSSCSSCCCHHHHHHHHHHHTTCC-CCCC------CS--CCHHHHHHHHHHHHHHSCCCCCG--GGEEEESCHH
T ss_pred CeeEeeecCCCCCCCHHHHHHHHHHHhCCC-CCCC------CC--ChHHHHHHHHHHHHHhcCCCCCH--HHEEEcCCHH
Confidence 5788887776 368999999988775411 1232 21 346 8888999999888843221 3599999999
Q ss_pred -HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc
Q 023191 124 -SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG 202 (286)
Q Consensus 124 -a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~ 202 (286)
++.+++.+++++||+|+++.+.|.++. ..+...|.+++.++++.+..++.+|+++|++++++.++++|+++
T Consensus 98 ~al~~~~~~l~~~gd~vl~~~p~y~~~~--------~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~l~ 169 (390)
T 1d2f_A 98 YMVSELIRQWSETGEGVVIHTPAYDAFY--------KAIEGNQRTVMPVALEKQADGWFCDMGKLEAVLAKPECKIMLLC 169 (390)
T ss_dssp HHHHHHHHHSSCTTCEEEEEESCCHHHH--------HHHHHTTCEEEEEECEECSSSEECCHHHHHHHHTSTTEEEEEEE
T ss_pred HHHHHHHHHhcCCCCEEEEcCCCcHHHH--------HHHHHCCCEEEEeecccCCCccccCHHHHHHHhccCCCeEEEEe
Confidence 888799999999999999996655543 24445666666665432211356899999999975578999887
Q ss_pred -CCC-CCCccC---HHHHHHHHHhcCCEEEEeccccccccccCCCCC--CCC-c-ceEEEeCCCCCCC--CCCceEEEEe
Q 023191 203 -ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVIPS--PFE-Y-ADVVTTTTHKSLR--GPRGAMIFFR 271 (286)
Q Consensus 203 -~~n-~g~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~--~~~-~-~D~v~~s~~K~l~--gp~gG~l~~~ 271 (286)
++| +|...+ +++|+++|++||+++|+|++|+........... .+. . .|. +.|++|+|+ |.+.|+++++
T Consensus 170 ~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~d~-~~s~sK~~~~~G~r~G~~~~~ 248 (390)
T 1d2f_A 170 SPQNPTGKVWTCDELEIMADLCERHGVRVISDEIHMDMVWGEQPHIPWSNVARGDWAL-LTSGSKSFNIPALTGAYGIIE 248 (390)
T ss_dssp SSCTTTCCCCCTTHHHHHHHHHHHTTCEEEEECTTTTCBCSSSCCCCGGGTCCSSEEE-EECSHHHHTCGGGCCEEEEEC
T ss_pred CCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcCHHHcchhhHhh-ccCccHhhcccChhheEEEEC
Confidence 666 666655 889999999999999999998764432111111 111 1 277 999999884 3345999986
Q ss_pred -cchhhhhc
Q 023191 272 -KGVKEINK 279 (286)
Q Consensus 272 -~~~~~~~~ 279 (286)
+++.+..+
T Consensus 249 ~~~~~~~~~ 257 (390)
T 1d2f_A 249 NSSSRDAYL 257 (390)
T ss_dssp SHHHHHHHH
T ss_pred CHHHHHHHH
Confidence 46655443
No 93
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=99.85 E-value=2e-20 Score=169.35 Aligned_cols=194 Identities=15% Similarity=0.201 Sum_probs=139.9
Q ss_pred CCCCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-HHHHHHHHh-
Q 023191 55 ENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTAL- 132 (286)
Q Consensus 55 e~~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l~a~- 132 (286)
.+..++++++++.+.+.+.|. .. ......+++ +.+++++|.+ +|++++|++ ++.+++.++
T Consensus 7 ~p~~~~~v~~a~~~~~~~~~~----~~----~g~~~~~l~----~~la~~~~~~------~v~~~~ggt~al~~~~~~l~ 68 (394)
T 1o69_A 7 PPHMGGNELKYIEEVFKSNYI----AP----LGEFVNRFE----QSVKDYSKSE------NALALNSATAALHLALRVAG 68 (394)
T ss_dssp -----CCHHHHHHHHHHHTTT----SC----TTHHHHHHH----HHHHHHHCCS------EEEEESCHHHHHHHHHHHTT
T ss_pred CCCCCHHHHHHHHHHHHcCCc----cC----CChHHHHHH----HHHHHHhCCC------cEEEeCCHHHHHHHHHHHcC
Confidence 444677888888888765331 10 012244444 7777777763 388888888 888899999
Q ss_pred cCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhc--CCcEEEEcCCCCCCcc
Q 023191 133 LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF--RPKLIVAGASAYARLY 210 (286)
Q Consensus 133 ~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~--~tk~v~i~~~n~g~~~ 210 (286)
+++||+|+++.+.|.++.. .+...|.+++.++ .+ +++.+|++++++.+++. ++++|++++ .+|...
T Consensus 69 ~~~gd~Vl~~~~~~~~~~~--------~~~~~g~~~~~v~--~~-~~~~~d~~~l~~~i~~~~~~~~~v~~~~-~~G~~~ 136 (394)
T 1o69_A 69 VKQDDIVLASSFTFIASVA--------PICYLKAKPVFID--CD-ETYNIDVDLLKLAIKECEKKPKALILTH-LYGNAA 136 (394)
T ss_dssp CCTTCEEEEESSSCGGGTH--------HHHHTTCEEEEEC--BC-TTSSBCHHHHHHHHHHCSSCCCEEEEEC-GGGCCC
T ss_pred CCCCCEEEECCCccHHHHH--------HHHHcCCEEEEEE--eC-CCCCcCHHHHHHHHhcccCCceEEEEEC-CCCChh
Confidence 9999999999977776644 3345666565555 44 56889999999999764 689998874 467889
Q ss_pred CHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCCcceEEEeCCCCCCCCCCceEEEEe-cchhhhh
Q 023191 211 DYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFR-KGVKEIN 278 (286)
Q Consensus 211 ~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~gG~l~~~-~~~~~~~ 278 (286)
++++|.++|+++|+++|+|++|+.|....+.....+..+|+.++|.||+++|+++|+++++ +++.+..
T Consensus 137 ~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~~~~~~s~s~~K~l~~~~~G~~~~~~~~l~~~l 205 (394)
T 1o69_A 137 KMDEIVEICKENDIVLIEDAAEALGSFYKNKALGTFGEFGVYSYNGNKIITTSGGGMLIGKNKEKIEKA 205 (394)
T ss_dssp CHHHHHHHHHHTTCEEEEECTTCTTCEETTEETTSSSSEEEEECCTTSSSCCSSCEEEEESCHHHHHHH
T ss_pred hHHHHHHHHHHcCCEEEEECcCcccceeCCcccccccCcEEEEEeCCccCCCCCceEEEECCHHHHHHH
Confidence 9999999999999999999999877665443211223488899999999987777999996 5655444
No 94
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=99.85 E-value=1.8e-20 Score=167.98 Aligned_cols=210 Identities=12% Similarity=0.078 Sum_probs=148.6
Q ss_pred HcCceecCCCCC--CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH
Q 023191 46 WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP 123 (286)
Q Consensus 46 ~~~i~L~~~e~~--~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~ 123 (286)
++.++|..++++ +++.+++++.+.+.+.. .+| +. .+ .++++++.+++.+.+|.+.+. .+|++|+|++
T Consensus 23 ~~~idl~~~~~~~~~~~~v~~a~~~~~~~~~-~~y------~~-~~-~~lr~~la~~~~~~~~~~~~~--~~i~~t~g~~ 91 (377)
T 3fdb_A 23 QGVLPLWVAESDFSTCPAVLQAITDAVQREA-FGY------QP-DG-SLLSQATAEFYADRYGYQARP--EWIFPIPDVV 91 (377)
T ss_dssp TTSEECCSSCCCSCCCHHHHHHHHHHHHTTC-CSS------CC-SS-CCHHHHHHHHHHHHHCCCCCG--GGEEEESCHH
T ss_pred CCeeeecccCCCCCCCHHHHHHHHHHHHcCC-CCC------CC-CC-HHHHHHHHHHHHHHhCCCCCH--HHEEEeCChH
Confidence 357899888874 68999999988876521 123 22 23 577888888888888854322 3699999999
Q ss_pred -HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc
Q 023191 124 -SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG 202 (286)
Q Consensus 124 -a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~ 202 (286)
++..++.+++++||+|+++.+.|.++.. .+...|.+++.++ .+ ++ +|++++++++++ ++++++++
T Consensus 92 ~a~~~~~~~~~~~gd~vl~~~~~~~~~~~--------~~~~~g~~~~~~~--~~-~~--~d~~~l~~~l~~-~~~~v~i~ 157 (377)
T 3fdb_A 92 RGLYIAIDHFTPAQSKVIVPTPAYPPFFH--------LLSATQREGIFID--AT-GG--INLHDVEKGFQA-GARSILLC 157 (377)
T ss_dssp HHHHHHHHHHSCTTCCEEEEESCCTHHHH--------HHHHHTCCEEEEE--CT-TS--CCHHHHHHHHHT-TCCEEEEE
T ss_pred HHHHHHHHHhcCCCCEEEEcCCCcHhHHH--------HHHHcCCEEEEcc--CC-CC--CCHHHHHHHhcc-CCCEEEEe
Confidence 8887999999999999999966665432 4445676666565 44 22 999999999988 79999887
Q ss_pred -CCC-CCCccC---HHHHHHHHHhcCCEEEEeccccccccccCCCCCCCC-----cceEEEeCCCCCCCC--CCceEEEE
Q 023191 203 -ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFE-----YADVVTTTTHKSLRG--PRGAMIFF 270 (286)
Q Consensus 203 -~~n-~g~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~-----~~D~v~~s~~K~l~g--p~gG~l~~ 270 (286)
++| +|...+ +++|+++|++||+++|+|++|+...........++. ..++++.|++|+++. .+.|++++
T Consensus 158 ~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~ 237 (377)
T 3fdb_A 158 NPYNPLGMVFAPEWLNELCDLAHRYDARVLVDEIHAPLVFDGQHTVAAGVSDTAASVCITITAPSKAWNIAGLKCAQIIF 237 (377)
T ss_dssp SSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSCHHHHHHEEEEECSTTTTTCGGGCCEEEEC
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEcccchhhcCCCCCcccHHHccCCCcEEEEEeChHhccCcchhheEEEe
Confidence 666 666554 677888899999999999998764332201111111 244889999999843 34487776
Q ss_pred -ecchhhhhcc
Q 023191 271 -RKGVKEINKQ 280 (286)
Q Consensus 271 -~~~~~~~~~~ 280 (286)
++++.+..++
T Consensus 238 ~~~~~~~~~~~ 248 (377)
T 3fdb_A 238 SNPSDAEHWQQ 248 (377)
T ss_dssp CSHHHHHHHHH
T ss_pred CCHHHHHHHHH
Confidence 5566665543
No 95
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=99.85 E-value=1.4e-20 Score=174.89 Aligned_cols=197 Identities=11% Similarity=0.027 Sum_probs=140.9
Q ss_pred CHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcc------eeEEeCCChH-HHHHHHHH
Q 023191 59 SVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWG------VNVQSLSGSP-SNFQVYTA 131 (286)
Q Consensus 59 ~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~------~~v~~~sG~~-a~~~~l~a 131 (286)
|..+.+.+...+.... ..|..+....++|+.+.+++++++|.+.+.+. ...++++|++ +++.++.+
T Consensus 92 ~~~~~~~~~~~~n~~~-------~~~~~~p~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~~~~g~~~~ggt~an~~al~~ 164 (481)
T 4e1o_A 92 PSLLGDMLADAINCLG-------FTWASSPACTELEMNVMDWLAKMLGLPEHFLHHHPSSQGGGVLQSTVSESTLIALLA 164 (481)
T ss_dssp HHHHHHHHHHHHCCCC-------SSTTTCHHHHHHHHHHHHHHHHHHTCCGGGCTTCTTCBCEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCccc-------CCcCCCcHHHHHHHHHHHHHHHHhCCChhhhccccCCCCceEEeCchHHHHHHHHHH
Confidence 4445555555554311 12445578899999999999999998653100 1356667766 77766655
Q ss_pred hc-------------------CCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhh
Q 023191 132 LL-------------------KPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSAT 192 (286)
Q Consensus 132 ~~-------------------~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~ 192 (286)
.. .+++.|++++..|.++.. .+.+.|.+++.+| .+ +++.+|+++|+++++
T Consensus 165 ar~~~~~~~~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~--------~~~~~g~~~~~v~--~~-~~~~~d~~~Le~~i~ 233 (481)
T 4e1o_A 165 ARKNKILEMKTSEPDADESSLNARLVAYASDQAHSSVEK--------AGLISLVKMKFLP--VD-DNFSLRGEALQKAIE 233 (481)
T ss_dssp HHHHHHHHHHHHCTTSCHHHHHTTEEEEEETTSCHHHHH--------HHHHHTCEEEEEC--CC-TTSCCCHHHHHHHHH
T ss_pred HHHHHHHHhhhcCcccccccccCCeEEEEcCcchHHHHH--------HHHhCCCceEEEE--cC-CCCcCCHHHHHHHHH
Confidence 42 267899999977777544 3345676666665 44 578999999999997
Q ss_pred hcC-----CcEEEEc-CCC-CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCC---CCCcceEEEeCCCCCCCC
Q 023191 193 LFR-----PKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPS---PFEYADVVTTTTHKSLRG 262 (286)
Q Consensus 193 ~~~-----tk~v~i~-~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~---~~~~~D~v~~s~~K~l~g 262 (286)
+.+ |++|+++ +++ +|.+.|+++|+++|++||+++++|+||+.+......... .++.+|++++++||||++
T Consensus 234 ~~~~~g~~~~~vv~~~~~t~~G~id~l~~I~~la~~~~~~lhvDaA~g~~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~ 313 (481)
T 4e1o_A 234 EDKQRGLVPVFVCATLGTTGVCAFDCLSELGPICAREGLWLHIDAAYAGTAFLCPEFRGFLKGIEYADSFTFNPSKWMMV 313 (481)
T ss_dssp HHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEECTTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSSC
T ss_pred HHHhCCCCcEEEEEecCCCCCcCcCCHHHHHHHHHHcCCeEEeehhhHHHHHhChhhHHHhcCcccCCEEEEChHHhcCC
Confidence 622 5666665 444 789999999999999999999999999877554322211 223479999999999999
Q ss_pred CCc-eEEEEecc
Q 023191 263 PRG-AMIFFRKG 273 (286)
Q Consensus 263 p~g-G~l~~~~~ 273 (286)
|.| |+++++++
T Consensus 314 p~g~g~l~~~~~ 325 (481)
T 4e1o_A 314 HFDCTGFWVKDK 325 (481)
T ss_dssp CSSCEEEEESBH
T ss_pred CCceEEEEEeCH
Confidence 999 99999875
No 96
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=99.84 E-value=6.8e-21 Score=172.29 Aligned_cols=207 Identities=18% Similarity=0.218 Sum_probs=144.6
Q ss_pred cCceecCCCCC---CCHHHHHHhccccccCCCCCCCCCccc-CCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCCh
Q 023191 47 KGLELIPSENF---TSVSVMQAVGSVMTNKYSEGYPGARYY-GGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS 122 (286)
Q Consensus 47 ~~i~L~~~e~~---~~~~v~~a~~~~l~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~ 122 (286)
..++|..+.+. +++.+++++.+.+.. +..++...++. +......+ +++.+++++|++ + .|++++|+
T Consensus 46 ~~id~~~~~~~g~~~~~~v~~a~~~~~~~-~~~~~~~~~~~~g~~~~~~~----l~~~la~~~g~~-~----~i~~~sGs 115 (401)
T 1fc4_A 46 HVINFCANNYLGLANHPDLIAAAKAGMDS-HGFGMASVRFICGTQDSHKE----LEQKLAAFLGME-D----AILYSSCF 115 (401)
T ss_dssp EEEECCCSCTTSCTTCHHHHHHHHHHHHH-HCSCCCSCHHHHCCBHHHHH----HHHHHHHHHTCS-E----EEEESCHH
T ss_pred cEEEeeccCcccccCCHHHHHHHHHHHHH-hCCCCCCCCcccCCcHHHHH----HHHHHHHHhCCC-c----EEEeCChH
Confidence 45777776443 489999999887754 32222221111 11233344 557777788886 2 58889997
Q ss_pred HHHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhc-----CCc
Q 023191 123 PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF-----RPK 197 (286)
Q Consensus 123 ~a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~-----~tk 197 (286)
.++..++.+++++||.|+++.+.|+++.. .+...|..++.++ ..|++++++.+++. +++
T Consensus 116 ~a~~~~~~~~~~~gd~v~~~~~~~~~~~~--------~~~~~g~~~~~~~--------~~d~~~l~~~l~~~~~~~~~~~ 179 (401)
T 1fc4_A 116 DANGGLFETLLGAEDAIISDALNHASIID--------GVRLCKAKRYRYA--------NNDMQELEARLKEAREAGARHV 179 (401)
T ss_dssp HHHHTTHHHHCCTTCEEEEETTCCHHHHH--------HHHTSCSEEEEEC--------TTCHHHHHHHHHHHHHTTCSSE
T ss_pred HHHHHHHHHHcCCCCEEEEcchhHHHHHH--------HHHHcCCceEEEC--------CCCHHHHHHHHHHhhccCCCce
Confidence 77777889999999999999977765432 3345565444332 24889999988753 689
Q ss_pred EEEEc-CCC-CCCccCHHHHHHHHHhcCCEEEEeccccccccc-cCCC-C--CCC-CcceEEEeCCCCCCCCCCceEEEE
Q 023191 198 LIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVA-AGVI-P--SPF-EYADVVTTTTHKSLRGPRGAMIFF 270 (286)
Q Consensus 198 ~v~i~-~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~-~~~~-~--~~~-~~~D~v~~s~~K~l~gp~gG~l~~ 270 (286)
+|+++ ++| +|...++++|.++|++||+++|+|++|+.|... .+.. . ..+ .+.|+++.|+||+|+|+.||++++
T Consensus 180 ~v~~~~~~nptG~~~~~~~i~~l~~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~~~di~~~s~sK~~~~~~gG~~~~ 259 (401)
T 1fc4_A 180 LIATDGVFSMDGVIANLKGVCDLADKYDALVMVDDSHAVGFVGENGRGSHEYCDVMGRVDIITGTLGKALGGASGGYTAA 259 (401)
T ss_dssp EEEEESEETTTTEECCHHHHHHHHHHTTEEEEEECTTTTTTSSTTSCCHHHHTTCTTCCSEEEEESSSTTCSSSCEEEEE
T ss_pred EEEEeCCcCCCCCCCCHHHHHHHHHHcCCEEEEECcccccccCCCCCccHHHcCCCcCCcEEEecchhhccCCCCEEEEc
Confidence 99987 555 778889999999999999999999998767652 1110 0 111 147999999999996666899999
Q ss_pred ecchhhhhc
Q 023191 271 RKGVKEINK 279 (286)
Q Consensus 271 ~~~~~~~~~ 279 (286)
++++.+..+
T Consensus 260 ~~~~~~~l~ 268 (401)
T 1fc4_A 260 RKEVVEWLR 268 (401)
T ss_dssp CHHHHHHHH
T ss_pred CHHHHHHHH
Confidence 888766554
No 97
>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}
Probab=99.84 E-value=8.8e-21 Score=173.77 Aligned_cols=178 Identities=14% Similarity=0.162 Sum_probs=130.2
Q ss_pred HHHHHHHHHHHHCCCCCCCcceeEEeCCChHHHHHHHHHhcCCCCeEEecc-CCCCcccCccccc--cccccccceeeeE
Q 023191 93 AESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALD-LPHGGHLSHGYQT--DTKKISAVSIFFE 169 (286)
Q Consensus 93 l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~a~~~~l~a~~~~Gd~Vl~~~-~~~~~~~~~~~~~--~~~~~~~~g~~~~ 169 (286)
.++++++++++++|.+... .++++++|+.++.+++.++++|||+|++++ +.|.++....... ++......|.+++
T Consensus 66 ~~~~l~~~la~~~g~~~~~--~~i~~~sGt~Ai~~al~al~~~Gd~Vl~~~~~~y~~~~~~~~l~g~~~~~~~~~G~~~~ 143 (431)
T 3ht4_A 66 GRDTLEKVYADVFGAEAGL--VRPQIISGTHAISTALFGILRPGDELLYITGKPYDTLEEIVGVRGKGVGSFKEYNIGYN 143 (431)
T ss_dssp HHHHHHHHHHHHTTCSEEC--CBTTSCSHHHHHHHHHHTTCCTTCEEEECSSSCCTTHHHHTTSSSCSSSCSGGGTCEEE
T ss_pred hHHHHHHHHHHHhCCCccc--ccceeeCHHHHHHHHHHHhCCCCCEEEEeCCCCchhHHHHHhhcccccchHHHcCCEEE
Confidence 3556779999999987632 234477776688889999999999999998 7777654321100 1112334565555
Q ss_pred EEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-----CCCccCHHHHHHHHHh--cCCEEEEeccccccccccCC
Q 023191 170 TMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-----YARLYDYERIRKVCNK--QKAIMLADMAHISGLVAAGV 241 (286)
Q Consensus 170 ~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~-~~n-----~g~~~~l~~I~~ia~~--~~~~vivD~a~~~g~~~~~~ 241 (286)
.++ .+ +++.+|++++++++++ +|++|+++ ++| ++...++++|+++|++ +|+++|+|++|+.+......
T Consensus 144 ~v~--~~-~~~~~d~e~l~~~l~~-~tk~V~i~~sp~np~~~~~~~~~l~~i~~la~~~~~~~~livDea~~~~~~~~~~ 219 (431)
T 3ht4_A 144 AVP--LT-EGGLVDFEAVAAAIHS-NTKMIGIQRSKGYATRPSFTISQIKEMIAFVKEIKPDVVVFVDNCYGEFIEEQEP 219 (431)
T ss_dssp ECC--BC-TTSSBCHHHHHHHCCT-TEEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCTTCEEEEECTTCTTSSSCCG
T ss_pred EeC--CC-CCCCcCHHHHHhhcCC-CCeEEEEECCCCCCCCCcCCHHHHHHHHHHHHhhCCCCEEEEeCCChhhccCCCc
Confidence 554 54 4588999999999987 89999996 333 3356789999999999 99999999998876543221
Q ss_pred CCCCCCcceEEEeCCCCCCCC---CCceEEEEecchhhhhc
Q 023191 242 IPSPFEYADVVTTTTHKSLRG---PRGAMIFFRKGVKEINK 279 (286)
Q Consensus 242 ~~~~~~~~D~v~~s~~K~l~g---p~gG~l~~~~~~~~~~~ 279 (286)
... ++|++++|++|+++| +.||++++++++.+..+
T Consensus 220 ~~~---g~Di~~~S~sK~lgg~~~~~GG~v~~~~~li~~l~ 257 (431)
T 3ht4_A 220 CHV---GADLMAGSLIKNPGGGIVKTGGYIVGKEQYVEACA 257 (431)
T ss_dssp GGT---TCSEEEEETTSGGGTTTCSSCEEEEECHHHHHHHH
T ss_pred ccc---CCeEEEcCccccCCCCCCCceEEEEecHHHHHHHH
Confidence 112 489999999999876 78899999988776554
No 98
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=99.84 E-value=1.9e-20 Score=168.47 Aligned_cols=206 Identities=17% Similarity=0.152 Sum_probs=144.3
Q ss_pred cCceecCCCC---CCCHHHHHHhccccccCCCCCCCCCcc-cCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCCh
Q 023191 47 KGLELIPSEN---FTSVSVMQAVGSVMTNKYSEGYPGARY-YGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS 122 (286)
Q Consensus 47 ~~i~L~~~e~---~~~~~v~~a~~~~l~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~ 122 (286)
..++|..+++ ++++.+++++.+.+.+ +..+++..++ ++......+ +++.+++++|++. .|++++|+
T Consensus 40 ~~id~~~~~~~~~~~~~~v~~a~~~~~~~-~~~~~~~~~~~~g~~~~~~~----l~~~la~~~g~~~-----~i~~~sGt 109 (384)
T 1bs0_A 40 QYLNFSSNDYLGLSHHPQIIRAWQQGAEQ-FGIGSGGSGHVSGYSVVHQA----LEEELAEWLGYSR-----ALLFISGF 109 (384)
T ss_dssp EEEECSCCCTTSGGGCHHHHHHHHHHHHH-HCSCCCSBTTTTCCCHHHHH----HHHHHHHHHTCSE-----EEEESCHH
T ss_pred eEEEeeccCccCCCCCHHHHHHHHHHHHH-hCCCCCCcCcccCChHHHHH----HHHHHHHHhCCCc-----EEEeCCcH
Confidence 4688888775 4689999999888754 1112221111 122334444 4477777778752 58889996
Q ss_pred HHHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhc--CCcEEE
Q 023191 123 PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF--RPKLIV 200 (286)
Q Consensus 123 ~a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~--~tk~v~ 200 (286)
.++..++.+++++||.|+++.+.|+++.. .+...|.+++.+| . .|++++++.+++. ++++|+
T Consensus 110 ~a~~~~~~~~~~~gd~v~~~~~~~~~~~~--------~~~~~g~~~~~~~--~------~d~~~l~~~l~~~~~~~~~v~ 173 (384)
T 1bs0_A 110 AANQAVIAAMMAKEDRIAADRLSHASLLE--------AASLSPSQLRRFA--H------NDVTHLARLLASPCPGQQMVV 173 (384)
T ss_dssp HHHHHHHHHHCCTTCEEEEETTCCHHHHH--------HHHTSSSEEEEEC--T------TCHHHHHHHHHSCCSSCEEEE
T ss_pred HHHHHHHHHhCCCCcEEEEcccccHHHHH--------HHHHcCCCEEEeC--C------CCHHHHHHHHHhcCCCCeEEE
Confidence 67777889999999999999976665543 3345565554443 2 4899999998763 267787
Q ss_pred Ec-CCC-CCCccCHHHHHHHHHhcCCEEEEecccccccccc-CCC-CCCC-CcceEEEeCCCCCCCCCCceEEEEecchh
Q 023191 201 AG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAA-GVI-PSPF-EYADVVTTTTHKSLRGPRGAMIFFRKGVK 275 (286)
Q Consensus 201 i~-~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~-~~~-~~~~-~~~D~v~~s~~K~l~gp~gG~l~~~~~~~ 275 (286)
++ ++| +|...++++|.++|++||+++|+|++|+.|.... +.. ...+ .+.|++++|+||+++ |.||++++++++.
T Consensus 174 ~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~-~~GG~~~~~~~~~ 252 (384)
T 1bs0_A 174 TEGVFSMDGDSAPLAEIQQVTQQHNGWLMVDDAHGTGVIGEQGRGSCWLQKVKPELLVVTFGKGFG-VSGAAVLCSSTVA 252 (384)
T ss_dssp EESBCTTTCCBCCHHHHHHHHHHTTCEEEEECTTTTTTSSGGGCCHHHHTTCCCSEEEEESSSTTS-SCCEEEEECHHHH
T ss_pred EeCCCCCCCCccCHHHHHHHHHHcCcEEEEECCcccceecCCCCchHHhcCCCCcEEEeeccchhh-ccCcEEEeCHHHH
Confidence 77 556 7788899999999999999999999998765421 110 0011 137899999999885 7789999998776
Q ss_pred hhhc
Q 023191 276 EINK 279 (286)
Q Consensus 276 ~~~~ 279 (286)
+..+
T Consensus 253 ~~l~ 256 (384)
T 1bs0_A 253 DYLL 256 (384)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5544
No 99
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=99.84 E-value=1.5e-20 Score=175.94 Aligned_cols=176 Identities=14% Similarity=0.052 Sum_probs=135.9
Q ss_pred CcchHHHHHHHHHHHHHHHCCCCC--CCcceeEEeCCChH-HHHHHHHHhcCCC--------CeEEeccCCCCcccCccc
Q 023191 86 GNEYIDMAESLCQKRALEAFRLDP--EKWGVNVQSLSGSP-SNFQVYTALLKPH--------DRIMALDLPHGGHLSHGY 154 (286)
Q Consensus 86 ~~~~~~~l~~~~~~~~~~~~g~~~--~~~~~~v~~~sG~~-a~~~~l~a~~~~G--------d~Vl~~~~~~~~~~~~~~ 154 (286)
......++++++++++++++|++. +. ...++++|++ ++..++.++.++| |+|+++.+.|.++..
T Consensus 133 ~~p~~~~le~~l~~~la~~~g~~~~~~~--v~~~~t~ggt~a~~~al~a~~~~g~~~~g~~~d~Vi~~~~~~~~~~~--- 207 (514)
T 3mad_A 133 LWPSTAKFEAEVVAMTAHMLGGDAAGGT--VCGTVTSGGTESLLLAMKTYRDWARATKGITAPEAVVPVSAHAAFDK--- 207 (514)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTGGGGTSC--CEEEEESSHHHHHHHHHHHHHHHHHHHHCCSSCEEEEETTSCTHHHH---
T ss_pred cChHHHHHHHHHHHHHHHHcCCCCccCC--cceEEcCcHHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCccchHHHH---
Confidence 345677899999999999999874 22 1228888888 8888889888776 999999966666432
Q ss_pred cccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccCHHHHHHHHHhcCCEEEEeccc
Q 023191 155 QTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAH 232 (286)
Q Consensus 155 ~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~-~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~ 232 (286)
.+...|.+++.++ .+ +++.+|+++|++++++ ++++|+++ ++| +|...|+++|.++|++||+++|+|++|
T Consensus 208 -----~~~~~G~~v~~v~--~~-~~~~~d~~~Le~~i~~-~~~~v~~~~~~nptG~~~~l~~i~~la~~~~i~livDea~ 278 (514)
T 3mad_A 208 -----AAQYFGIKLVRTP--LD-ADYRADVAAMREAITP-NTVVVAGSAPGYPHGVVDPIPEIAALAAEHGIGCHVDACL 278 (514)
T ss_dssp -----HHHHHTCEEEEEC--BC-TTSCBCHHHHHHHCCT-TEEEEEEETTCTTTCCCCCHHHHHHHHHHHTCEEEEECTT
T ss_pred -----HHHHcCCeeEEee--eC-CCCCCCHHHHHHHhcc-CCEEEEEeCCCCCCccccCHHHHHHHHHHhCCeEEEeccc
Confidence 4456676666665 44 4789999999999987 89999987 655 788999999999999999999999998
Q ss_pred cccccc----cCC----CCCCCCcceEEEeCCCCCCCCCCc-eEEEEecchh
Q 023191 233 ISGLVA----AGV----IPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVK 275 (286)
Q Consensus 233 ~~g~~~----~~~----~~~~~~~~D~v~~s~~K~l~gp~g-G~l~~~~~~~ 275 (286)
+.+... .+. ......++|++++++||++++|.+ |+++++++..
T Consensus 279 ~~~~~~~~~~~g~~~~~~~~~~~g~d~~~~s~~K~l~~~~~~g~~~~~~~~~ 330 (514)
T 3mad_A 279 GGFILPWAERLGYPVPPFDFRLEGVTSVSADTHKYGYGAKGTSVILYRRPDL 330 (514)
T ss_dssp TTTTHHHHHHTTCCCCCCSTTSTTCCEEEECTTTTTCCCSSCEEEEESSHHH
T ss_pred ccccchhHHhcCCCCCcccccCCCCcEEEECchhccCCCCCeEEEEEeCHHH
Confidence 755432 011 111123589999999999888877 9999988643
No 100
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=99.84 E-value=5.9e-20 Score=167.21 Aligned_cols=230 Identities=11% Similarity=0.082 Sum_probs=153.1
Q ss_pred cccChHHHHHHHHHHHHH-----HcCceecCCCC-------CCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHH
Q 023191 28 EVVDPEIADIIEHEKARQ-----WKGLELIPSEN-------FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAES 95 (286)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~-----~~~i~L~~~e~-------~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~ 95 (286)
...+..++.......+.. .+.|+|..|++ ++++.+.+++.+...... ..|+...+..++++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~g~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~-------~~y~~~~g~~~lr~ 87 (418)
T 3rq1_A 15 KKLKDVIFVTAGQAQADAKENGRENVVNGTLGAIHDEEGNLVFLKTVKEEYLSLSDSEH-------VGYAPIAGIPDFLC 87 (418)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHCGGGCEECCSSCCBCTTSCBCCCHHHHHHHHTCCHHHH-------HSCCCTTCCHHHHH
T ss_pred CCCCchHHHHHHHHHhhhhhhcCCCeEECCCCcccCCCCCccccHHHHHHHHHhccccc-------CCCCCCCChHHHHH
Confidence 345556666554433222 25789988852 468889888877553211 11334456778998
Q ss_pred HHHHHHHHHCCCCCCCcceeEEeCCChH-HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecc
Q 023191 96 LCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYR 174 (286)
Q Consensus 96 ~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~ 174 (286)
++.+++.+..+.+.. .+|++|+|++ ++.+++.++++|||+|+++++.|.++ ...+...|.+++.++
T Consensus 88 ~ia~~~~~~~~~~~~---~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~--------~~~~~~~g~~~~~v~-- 154 (418)
T 3rq1_A 88 AAEKECFGNFRPEGH---IRSIATAGGTGGIHHLIHNYTEPGDEVLTADWYWGAY--------RVICSDTGRTLVTYS-- 154 (418)
T ss_dssp HHHHHHHGGGCCSSE---EEEEEESHHHHHHHHHHHHHSCTTCEEEEESSCCTHH--------HHHHHHTTCEEEEEC--
T ss_pred HHHHHHhcccCcccc---ccEEECCchHHHHHHHHHHhcCCCCEEEECCCCchhH--------HHHHHHcCCEEEEEe--
Confidence 888888777665421 3699999999 88889999999999999999555443 335556776666665
Q ss_pred cCCCCCCCCHHHHHHHhhhc---CCc-EEEEc-C-CC-CCCccCHH---HHHHHHH------hcCCEEEEeccccccccc
Q 023191 175 LNESTGYIDYDQLEKSATLF---RPK-LIVAG-A-SA-YARLYDYE---RIRKVCN------KQKAIMLADMAHISGLVA 238 (286)
Q Consensus 175 ~~~~~~~~d~e~l~~~i~~~---~tk-~v~i~-~-~n-~g~~~~l~---~I~~ia~------~~~~~vivD~a~~~g~~~ 238 (286)
++.+++.+|++++++.+++. +++ +++++ | +| +|...+.+ +|+++|+ +||+++|+|++|.. ...
T Consensus 155 ~~~~~~~~d~~~l~~~l~~~~~~~~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~-~~~ 233 (418)
T 3rq1_A 155 LFDEHNNFNHEAFQNRVNELAAKQTNVVVIFNTPGNNPTGYSIEDKDWDSILNFLKDLVAIGRNNVIIGIDVAYLD-YSG 233 (418)
T ss_dssp SBCTTSSBCHHHHHHHHHHHHHHCSEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTSSCEEEEEEECTTGG-GSS
T ss_pred eeCCCCCcCHHHHHHHHHHhhccCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHhhhccCCCeEEEEeccccc-ccC
Confidence 43345789999999998752 666 67777 6 56 77776655 5556666 89999999999742 221
Q ss_pred cC-----CCC--CCCCcc---eEEEeCCCCCCC--CCCceEEEE---ecchhhhhc
Q 023191 239 AG-----VIP--SPFEYA---DVVTTTTHKSLR--GPRGAMIFF---RKGVKEINK 279 (286)
Q Consensus 239 ~~-----~~~--~~~~~~---D~v~~s~~K~l~--gp~gG~l~~---~~~~~~~~~ 279 (286)
.+ +.. ..+. - .+++.|++|+++ |.+.|++++ ++++.+..+
T Consensus 234 ~~~~~~~~~~~~~~~~-~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~~~~~ 288 (418)
T 3rq1_A 234 EKDEVRAFFNKFSHLP-KEILTCVCYSLSKGFTMYGQRVGAMIGISDDEEIADEFF 288 (418)
T ss_dssp CHHHHHGGGGGGTTCC-TTEEEEEEEESTTTTTCCSSCCEEEEEEESSHHHHHHHH
T ss_pred ChHHHHHHHHHHHhcC-CCceEEEEEeCCCCCcCcCCcceEEEEEeCCHHHHHHHH
Confidence 11 000 0000 1 277899999875 445599998 677766554
No 101
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=99.84 E-value=2.7e-21 Score=174.91 Aligned_cols=233 Identities=14% Similarity=0.064 Sum_probs=153.5
Q ss_pred chhhccccccccChHHHHHHHHHHHHHHcCceecCCCCC----CCHHHHHHhccccccCC--CCCCCCCcccCCcchHHH
Q 023191 19 WPKQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENF----TSVSVMQAVGSVMTNKY--SEGYPGARYYGGNEYIDM 92 (286)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~L~~~e~~----~~~~v~~a~~~~l~~~~--~~~~~~~~~~~~~~~~~~ 92 (286)
+..+++++...+.+..+..+.... ...+.++|..+.+. +++.+.+++.+.+.... ..+| +...+..+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~l~~g~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y------~~~~~~~~ 78 (397)
T 2zyj_A 6 WSEAFGKGAGRIQASTIRELLKLT-QRPGILSFAGGLPAPELFPKEEAAEAAARILREKGEVALQY------SPTEGYAP 78 (397)
T ss_dssp HHHHSCGGGGGCCCCHHHHHHHHH-TSTTCEEESSCCCCGGGCCHHHHHHHHHHHHHHHHHHHTSC------CCTTCCHH
T ss_pred HHHHhhhhhcccCchHHHHHHhhc-cCCCceecCCCCCCchhCCHHHHHHHHHHHHHhcchhhhCC------CCCCCCHH
Confidence 444556666666655555444432 23467899776542 56788898887765310 0122 22234556
Q ss_pred HHHHHHHHHHHHCCCCCCCcceeEEeCCChH-HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEE
Q 023191 93 AESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETM 171 (286)
Q Consensus 93 l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v 171 (286)
++ +.+++++|++++ +|++|+|++ ++.+++.+++++||+|+++.+.|.++. ..+...|.+++.+
T Consensus 79 l~----~~la~~~g~~~~----~v~~~~g~~~al~~~~~~~~~~gd~Vl~~~p~y~~~~--------~~~~~~g~~~~~~ 142 (397)
T 2zyj_A 79 LR----AFVAEWIGVRPE----EVLITTGSQQALDLVGKVFLDEGSPVLLEAPSYMGAI--------QAFRLQGPRFLTV 142 (397)
T ss_dssp HH----HHHHHHHTSCGG----GEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHH--------HHHHTTCCEEEEE
T ss_pred HH----HHHHHHhCCChh----hEEEeccHHHHHHHHHHHhCCCCCEEEEeCCCcHHHH--------HHHHHcCCEEEec
Confidence 66 455555577654 599999999 887788999999999999996655543 2444566666656
Q ss_pred ecccCCCCCCCCHHHHHHHhhhcCCcEEE-Ec-CCC-CCCccC---HHHHHHHHHhcCCEEEEeccccccccccCCCCCC
Q 023191 172 PYRLNESTGYIDYDQLEKSATLFRPKLIV-AG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVIPSP 245 (286)
Q Consensus 172 ~~~~~~~~~~~d~e~l~~~i~~~~tk~v~-i~-~~n-~g~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~ 245 (286)
++ + ++ .+|++++++.+++.++++|+ ++ ++| +|...+ +++|+++|++||+++|+|++|+........ ...
T Consensus 143 ~~--~-~~-~~d~~~l~~~l~~~~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~-~~~ 217 (397)
T 2zyj_A 143 PA--G-EE-GPDLDALEEVLKRERPRFLYLIPSFQNPTGGLTPLPARKRLLQMVMERGLVVVEDDAYRELYFGEAR-LPS 217 (397)
T ss_dssp EE--E-TT-EECHHHHHHHHHHCCCSCEEECCBSCTTTCCBCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCSSCC-CCC
T ss_pred Cc--C-CC-CCCHHHHHHHHhhcCCeEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEeCCcccccCCCCC-CCc
Confidence 54 3 22 38999999999865789885 45 656 676666 458999999999999999998765432111 111
Q ss_pred CC--c------ceEEEeCCCCCCCC-CCceEEEEecchhhhhc
Q 023191 246 FE--Y------ADVVTTTTHKSLRG-PRGAMIFFRKGVKEINK 279 (286)
Q Consensus 246 ~~--~------~D~v~~s~~K~l~g-p~gG~l~~~~~~~~~~~ 279 (286)
+. + ..+++.|+||+|++ .+.|++++++++.+..+
T Consensus 218 ~~~~~~~~~~~~~i~~~s~sK~~~~G~r~G~~~~~~~~~~~l~ 260 (397)
T 2zyj_A 218 LFELAREAGYPGVIYLGSFSKVLSPGLRVAFAVAHPEALQKLV 260 (397)
T ss_dssp HHHHHHHHTCCCEEEEEESTTTTCGGGCCEEEECCHHHHHHHH
T ss_pred hhhhCcccCCCeEEEEecccccccccceeEEEecCHHHHHHHH
Confidence 11 1 23889999999971 23399999987765544
No 102
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=99.84 E-value=6.5e-21 Score=174.87 Aligned_cols=227 Identities=10% Similarity=0.008 Sum_probs=149.9
Q ss_pred HcCc-eecCCCCCCCHHHHHHhccccccCCCC---CC--CC----CcccCCcchHHHHHHHHHHHHHHHCCCCCCCccee
Q 023191 46 WKGL-ELIPSENFTSVSVMQAVGSVMTNKYSE---GY--PG----ARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVN 115 (286)
Q Consensus 46 ~~~i-~L~~~e~~~~~~v~~a~~~~l~~~~~~---~~--~~----~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~ 115 (286)
.+.| +|..+.+..++.+.+++.+++...... +. +. ...|+...+..++++++.+++.+.+|+..+. .+
T Consensus 31 ~~~i~~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~--~~ 108 (444)
T 3if2_A 31 DQPVNMLGGGNPAKIDAVNELFLETYKALGNDNDTGKANSSAIISMANYSNPQGDSAFIDALVGFFNRHYDWNLTS--EN 108 (444)
T ss_dssp SSCCEECSCCCCCCCHHHHHHHHHHHHHHHSCSCTTCCCCHHHHHHHSCCCTTCCHHHHHHHHHHHHHHHCCCCCG--GG
T ss_pred chhhhccCCCCCCcccchHHHHHHHHHHHHhccccccccchhhhhhhccCCCCCCHHHHHHHHHHHHhhcCCCCCH--HH
Confidence 4678 999888877766655555544331110 00 10 1235555677899999999998888764322 36
Q ss_pred EEeCCChH-HHHHHHHHhcCCCC--------------eEEec-cCCCCcccCccccccccccccceeeeEEEecccCCC-
Q 023191 116 VQSLSGSP-SNFQVYTALLKPHD--------------RIMAL-DLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNES- 178 (286)
Q Consensus 116 v~~~sG~~-a~~~~l~a~~~~Gd--------------~Vl~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~- 178 (286)
|++|+|++ ++.+++.+++++|| +|+++ ++.|.++....... . .+.+....+++++.+.+
T Consensus 109 i~~t~G~t~al~~~~~~l~~~gd~~~~~~~~~~g~~~~vi~~~~p~~~~~~~~~~~~--~--~~~~~~~~~~~~~~~~~~ 184 (444)
T 3if2_A 109 IALTNGSQNAFFYLFNLFGGAFVNEHSQDKESKSVDKSILLPLTPEYIGYSDVHVEG--Q--HFAAVLPHIDEVTHDGEE 184 (444)
T ss_dssp EEEESSHHHHHHHHHHHSSEEEECC-------CEEEEEEEESSSSCCGGGTTCCSSS--C--CEEECCCEEEEEEETTEE
T ss_pred EEEecCcHHHHHHHHHHHhCCCccccccccccccccceEEEeCCCCccchhhccccc--c--hhhccCceEEeccccccc
Confidence 99999999 88889999999998 78876 77776664322100 0 11222234444455422
Q ss_pred ---CCCCCHHHHHHH---hhhcCCcEEEEc-CCC-CCCccC---HHHHHHHHHhcCCEEEEeccccccccccCCCCC--C
Q 023191 179 ---TGYIDYDQLEKS---ATLFRPKLIVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVIPS--P 245 (286)
Q Consensus 179 ---~~~~d~e~l~~~---i~~~~tk~v~i~-~~n-~g~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~--~ 245 (286)
++.+|+++|+++ +.+ ++++|+++ ++| +|...+ +++|+++|++||+++|+|++|+.+......... .
T Consensus 185 g~~~~~~d~~~l~~~l~~~~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~ 263 (444)
T 3if2_A 185 GFFKYRVDFEALENLPALKEG-RIGAICCSRPTNPTGNVLTDEEMAHLAEIAKRYDIPLIIDNAYGMPFPNIIYSDAHLN 263 (444)
T ss_dssp EEEEEECCHHHHHTCHHHHTT-CEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTTCCBCSCCCCC
T ss_pred CccccCCCHHHHHHHHHhcCC-CceEEEeCCCCCCCCCcCCHHHHHHHHHHHHHCCCEEEEECCCCCccccccccccccc
Confidence 247899999987 555 88999987 777 777777 888999999999999999998643221111110 1
Q ss_pred CCcceEEEeCCCCCCC-CCCceEEEEecchhhhhc
Q 023191 246 FEYADVVTTTTHKSLR-GPRGAMIFFRKGVKEINK 279 (286)
Q Consensus 246 ~~~~D~v~~s~~K~l~-gp~gG~l~~~~~~~~~~~ 279 (286)
..+.+++++|+||++. |.+.|+++.++++.+..+
T Consensus 264 ~~~~~i~~~S~sK~~~~G~r~G~~~~~~~l~~~~~ 298 (444)
T 3if2_A 264 WDNNTILCFSLSKIGLPGMRTGIIVADAKVIEAVS 298 (444)
T ss_dssp CCTTEEEEEESTTTTCGGGCCEEEECCHHHHHHHH
T ss_pred CCCCEEEEechhhccCCCCceEEEEECHHHHHHHH
Confidence 1247899999999632 223399998888776554
No 103
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=99.84 E-value=1.5e-20 Score=171.35 Aligned_cols=199 Identities=15% Similarity=0.111 Sum_probs=138.4
Q ss_pred CCCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChHHHHHHHHHh-cC
Q 023191 56 NFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTAL-LK 134 (286)
Q Consensus 56 ~~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~a~~~~l~a~-~~ 134 (286)
+++++++++++.+.+.+.....|+ ...+..++.+++++.+++++|++. .|++++|+.++.+++.++ ++
T Consensus 12 ~~~~~~~~~a~~~~~~~~~~~~~~------~~~g~~~l~~~l~~~la~~~g~~~-----~i~~~~gt~al~~~~~~~~~~ 80 (418)
T 2c81_A 12 PQHSDRTRRKIEEVFQSNRWAISG------YWTGEESMERKFAKAFADFNGVPY-----CVPTTSGSTALMLALEALGIG 80 (418)
T ss_dssp SCCCHHHHHHHHHHHHHTCCSTTS------BCCSSCCHHHHHHHHHHHHHTCSE-----EEEESCHHHHHHHHHHHTTCC
T ss_pred CCCCHHHHHHHHHHHhcCCccccC------cccCCHHHHHHHHHHHHHHhCCCc-----EEEeCCHHHHHHHHHHHcCCC
Confidence 346899999999888652111121 112223445556688888889862 477777766888789999 89
Q ss_pred CCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCCccCHHH
Q 023191 135 PHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYER 214 (286)
Q Consensus 135 ~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~ 214 (286)
+||+|+++.+.|.++.. .+...|.+++.++ .+++++.+|++++++.+++ ++++|+++. .+|...++++
T Consensus 81 ~gd~Vl~~~~~~~~~~~--------~~~~~g~~~~~~~--~~~~~~~~d~~~l~~~i~~-~~~~v~~~~-~~G~~~~~~~ 148 (418)
T 2c81_A 81 EGDEVIVPSLTWIATAT--------AVLNVNALPVFVD--VEADTYCIDPQLIKSAITD-KTKAIIPVH-LFGSMANMDE 148 (418)
T ss_dssp TTCEEEEESSSCTHHHH--------HHHHTTCEEEEEC--BCTTTCSBCHHHHGGGCCT-TEEEECCBC-CTTCCCCHHH
T ss_pred CcCEEEECCCccHhHHH--------HHHHcCCEEEEEe--cCCCCCCcCHHHHHHhhCC-CCeEEEEeC-CcCCcccHHH
Confidence 99999999977766643 3345666565554 5534689999999999987 889888753 2688899999
Q ss_pred HHHHHHhcCCEEEEeccccccccccCCCCCCCCcceEEEeCCCCCCCCCCceEEEEe-cchhhh
Q 023191 215 IRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFR-KGVKEI 277 (286)
Q Consensus 215 I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~gG~l~~~-~~~~~~ 277 (286)
|.++|++||+++|+|++|+.+....+.....+..+++.++|.||++++++||+++++ +++.+.
T Consensus 149 i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~s~s~~K~~~~g~~g~~~~~~~~l~~~ 212 (418)
T 2c81_A 149 INEIAQEHNLFVIEDCAQSHGSVWNNQRAGTIGDIGAFSCQQGKVLTAGEGGIIVTKNPRLFEL 212 (418)
T ss_dssp HHHHHHHTTCEEEEECTTCTTCEETTEETTSSSSEEEEECCTTSSSCSSSCEEEEESCHHHHHH
T ss_pred HHHHHHHCCCEEEEECcccccCccCCEecccccceEEEeccCCcccCCCCeEEEEECCHHHHHH
Confidence 999999999999999999987632221111111133444445999976566999986 455443
No 104
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=99.84 E-value=1.4e-20 Score=169.67 Aligned_cols=196 Identities=13% Similarity=0.095 Sum_probs=144.2
Q ss_pred cCceecCCCCCCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-HH
Q 023191 47 KGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SN 125 (286)
Q Consensus 47 ~~i~L~~~e~~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~ 125 (286)
+.|+|.. +..|+.+++++.+.+.+.+ + .......+++ +.+++++|.+ ++++++|++ ++
T Consensus 9 ~~i~~~~--p~~~~~~~~a~~~~~~~~~---~------~~~~~~~~l~----~~la~~~~~~------~~~~~~~gt~al 67 (393)
T 1mdo_A 9 DFLPFSR--PAMGAEELAAVKTVLDSGW---I------TTGPKNQELE----AAFCRLTGNQ------YAVAVSSATAGM 67 (393)
T ss_dssp CCBCSCC--CCCCHHHHHHHHHHHHHTC---C------SSSHHHHHHH----HHHHHHHCCS------EEEEESCHHHHH
T ss_pred cccccCC--CCCCHHHHHHHHHHHhcCC---c------CCChHHHHHH----HHHHHHhCCC------cEEEecChHHHH
Confidence 4577754 4467888999988876522 1 1224445555 6777777865 267777777 88
Q ss_pred HHHHHHh-cCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEcCC
Q 023191 126 FQVYTAL-LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGAS 204 (286)
Q Consensus 126 ~~~l~a~-~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~~~ 204 (286)
.+++.++ +++||+|+++++.|.++.. .+...|.+++.++ .+++++.+|++++++.+++ ++++|++++
T Consensus 68 ~~~~~~~~~~~gd~Vl~~~~~~~~~~~--------~~~~~g~~~~~v~--~~~~~~~~d~~~l~~~l~~-~~~~v~~~~- 135 (393)
T 1mdo_A 68 HIALMALGIGEGDEVITPSMTWVSTLN--------MIVLLGANPVMVD--VDRDTLMVTPEHIEAAITP-QTKAIIPVH- 135 (393)
T ss_dssp HHHHHHTTCCTTCEEEEESSSCHHHHH--------HHHHTTCEEEEEC--BCTTTCCBCHHHHHHHCCT-TEEEECCBC-
T ss_pred HHHHHHcCCCCCCEEEeCCCccHhHHH--------HHHHCCCEEEEEe--ccCCcCCCCHHHHHHhcCC-CceEEEEeC-
Confidence 8899999 9999999999977766543 3345666565554 5544578999999999987 889888763
Q ss_pred CCCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCCcceEEEeCCC--CCCCCCCceEEEEe-cchhhhh
Q 023191 205 AYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTH--KSLRGPRGAMIFFR-KGVKEIN 278 (286)
Q Consensus 205 n~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~--K~l~gp~gG~l~~~-~~~~~~~ 278 (286)
.+|...++++|.++|+++|+++|+|++|+.|....+. +.+. .|++++|+| |+++|+++|+++++ +++.+..
T Consensus 136 ~~G~~~~~~~i~~l~~~~~~~li~D~a~~~g~~~~~~-~~~~--~d~~~~S~~k~K~l~~~~~g~~~~~~~~~~~~l 209 (393)
T 1mdo_A 136 YAGAPADLDAIYALGERYGIPVIEDAAHATGTSYKGR-HIGA--RGTAIFSFHAIKNITCAEGGIVVTDNPQFADKL 209 (393)
T ss_dssp GGGCCCCHHHHHHHHHHHTCCBCEECTTCTTCEETTE-ETTS--SSEEEEECCTTSSSCSSSCEEEEESCHHHHHHH
T ss_pred CCCCcCCHHHHHHHHHHcCCeEEEECccccCCeECCe-ecCC--CCeEEEeCCCCCccccccceEEEeCCHHHHHHH
Confidence 3677889999999999999999999999877554221 1111 799999999 99988888999997 4665443
No 105
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=99.84 E-value=2.8e-20 Score=173.79 Aligned_cols=176 Identities=18% Similarity=0.139 Sum_probs=133.4
Q ss_pred CCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-HHHHHHHHhcC--------CC-----C-eEEeccCCCCcc
Q 023191 85 GGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLK--------PH-----D-RIMALDLPHGGH 149 (286)
Q Consensus 85 ~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l~a~~~--------~G-----d-~Vl~~~~~~~~~ 149 (286)
.......++|+.+++++++++|++.+. .++++++|++ ++..++.++.. +| + .|++++..|.++
T Consensus 125 ~~~~~~~~le~~~~~~la~~~g~~~~~--~~~~~t~ggtea~~~al~~~~~~~~~~~~~~G~~~~~~~~v~~s~~~h~s~ 202 (504)
T 2okj_A 125 EIAPVFVLMEQITLKKMREIVGWSSKD--GDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSHYSI 202 (504)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHTCCSSS--CEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTHH
T ss_pred hhChHHHHHHHHHHHHHHHHhCCCCCC--CCEEEeCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCcchHHH
Confidence 334667789999999999999997311 3699999988 88777777642 56 6 788888777766
Q ss_pred cCcccccccccccccee---eeEEEecccCCCCCCCCHHHHHHHhhhc-----CCcEEEEc-CCC-CCCccCHHHHHHHH
Q 023191 150 LSHGYQTDTKKISAVSI---FFETMPYRLNESTGYIDYDQLEKSATLF-----RPKLIVAG-ASA-YARLYDYERIRKVC 219 (286)
Q Consensus 150 ~~~~~~~~~~~~~~~g~---~~~~v~~~~~~~~~~~d~e~l~~~i~~~-----~tk~v~i~-~~n-~g~~~~l~~I~~ia 219 (286)
.... ...|. +++.+| .+ +++.+|+++|++++++. +|++|+++ ++| +|.+.|+++|+++|
T Consensus 203 ~~~~--------~~~g~g~~~v~~v~--~~-~~~~~d~~~L~~~i~~~~~~g~~~~~V~~~~~~~~tG~i~~l~~I~~la 271 (504)
T 2okj_A 203 KKAG--------AALGFGTDNVILIK--CN-ERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDPIQEIADIC 271 (504)
T ss_dssp HHHH--------HHTTSCGGGEEEEC--BC-TTSCBCHHHHHHHHHHHHHTTCEEEEEEECBSCSSSCCBCCHHHHHHHH
T ss_pred HHHH--------HHcCCCcccEEEEe--cC-CCCCCCHHHHHHHHHHHHHCCCCceEEEEeCCCCCCCCcCCHHHHHHHH
Confidence 4432 23332 455565 44 56899999999999763 48888887 656 78899999999999
Q ss_pred HhcCCEEEEeccccccccccCCCC---CCCCcceEEEeCCCCCCCCCCc-eEEEEecc
Q 023191 220 NKQKAIMLADMAHISGLVAAGVIP---SPFEYADVVTTTTHKSLRGPRG-AMIFFRKG 273 (286)
Q Consensus 220 ~~~~~~vivD~a~~~g~~~~~~~~---~~~~~~D~v~~s~~K~l~gp~g-G~l~~~~~ 273 (286)
++||+++|+|++|+.+........ ..+.++|++++++|||+++|.+ |+++++++
T Consensus 272 ~~~g~~lhvD~a~~~~~~~~~~~~~~~~g~~~~D~i~~~~hK~~~~p~~~g~l~~~~~ 329 (504)
T 2okj_A 272 EKYNLWLHVDAAWGGGLLMSRKHRHKLNGIERANSVTWNPHKMMGVLLQCSAILVKEK 329 (504)
T ss_dssp HHHTCEEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCSCCEEEEESST
T ss_pred HHcCCEEEEehhhhhHHHhCHhhHhhcCCcccCCEEEECchhhcCCCcceEEEEEECH
Confidence 999999999999988776422111 1123589999999999998987 99999874
No 106
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=99.84 E-value=2.2e-20 Score=173.60 Aligned_cols=196 Identities=10% Similarity=0.079 Sum_probs=140.1
Q ss_pred CHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCc-----ceeEEeCCChH-HHHHHHHHh
Q 023191 59 SVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKW-----GVNVQSLSGSP-SNFQVYTAL 132 (286)
Q Consensus 59 ~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~-----~~~v~~~sG~~-a~~~~l~a~ 132 (286)
+..+.+++..++.. +. ..|.......++|+.+++++++++|++.+.. ...+++|+|++ +++.++.+.
T Consensus 87 ~~~~~~~~~~~~n~-~~------~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~v~t~ggTeA~~~al~~~ 159 (486)
T 1js3_A 87 PAMLADMLCGAIGC-IG------FSWAASPACTELETVMMDWLGKMLQLPEAFLAGEAGEGGGVIQGSASEATLVALLAA 159 (486)
T ss_dssp HHHHHHHHHHHHCC-CC------SSGGGCHHHHHHHHHHHHHHHHHTTCCGGGCCTTTCSCEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCc-Cc------cccccChhHHHHHHHHHHHHHHHhCCCchhcccCCCCCCeEEcCCcHHHHHHHHHHH
Confidence 34566666666532 11 1134446678999999999999999974200 02477888888 777666655
Q ss_pred cCC---------CC--------e--EEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhh
Q 023191 133 LKP---------HD--------R--IMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATL 193 (286)
Q Consensus 133 ~~~---------Gd--------~--Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~ 193 (286)
.++ || + |+++++.|.++.. .+...|..++.++ ++ +++.+|+++|++++++
T Consensus 160 ~~~~~~~~~~~~gd~~~~~~~~~~~v~~s~~~h~s~~~--------~~~~~G~~v~~v~--~d-~~~~~d~~~L~~~i~~ 228 (486)
T 1js3_A 160 RTKVVRRLQAASPGLTQGAVLEKLVAYASDQAHSSVER--------AGLIGGVKLKAIP--SD-GKFAMRASALQEALER 228 (486)
T ss_dssp HHHHHHHHHHHSTTCCHHHHHHHEEEEEETTCCHHHHH--------HHHHHTCEEEEEC--CC-TTSCCCHHHHHHHHHH
T ss_pred HHHHhhhhhccCccchhcccCCCEEEEECCCCcHHHHH--------HHHhCCCceEEee--cC-CCCCCCHHHHHHHHHH
Confidence 321 43 4 6778866655432 4556777666665 44 5789999999999986
Q ss_pred cCCc------EEEEc-CCC-CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCC---CCCCcceEEEeCCCCCCCC
Q 023191 194 FRPK------LIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIP---SPFEYADVVTTTTHKSLRG 262 (286)
Q Consensus 194 ~~tk------~v~i~-~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~---~~~~~~D~v~~s~~K~l~g 262 (286)
+++ +|+++ ++| +|...|+++|+++|++||+++|+|+||+.+........ ..+.++|++++++|||+++
T Consensus 229 -~~~~g~~p~~vv~~~~~n~tG~~~~l~~I~~la~~~~~~lhvD~a~g~~~~~~~~~~~~~~g~~~adsi~~~~hK~~~~ 307 (486)
T 1js3_A 229 -DKAAGLIPFFVVATLGTTSCCSFDNLLEVGPICHEEDIWLHVDAAYAGSAFICPEFRHLLNGVEFADSFNFNPHKWLLV 307 (486)
T ss_dssp -HHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHTTCEEEEECTTGGGGGGSTTTGGGGTTGGGCSEEEECHHHHSSC
T ss_pred -HHhCCCCceEEEEeCCCCCCCCCCCHHHHHHHHHHcCCEEEEehhhHHHHHHCHHHHHHhcCccccCeeEEchhhhcCC
Confidence 553 66666 666 88999999999999999999999999987765432111 1223589999999999998
Q ss_pred CCc-eEEEEecc
Q 023191 263 PRG-AMIFFRKG 273 (286)
Q Consensus 263 p~g-G~l~~~~~ 273 (286)
|.+ |+++++++
T Consensus 308 p~~~G~l~~~~~ 319 (486)
T 1js3_A 308 NFDCSAMWVKRR 319 (486)
T ss_dssp CSSCEEEEESCH
T ss_pred CcceEEEEEeCH
Confidence 877 99999875
No 107
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=99.84 E-value=3.5e-20 Score=170.35 Aligned_cols=208 Identities=12% Similarity=0.051 Sum_probs=141.2
Q ss_pred cCceecCCCC--CCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-
Q 023191 47 KGLELIPSEN--FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP- 123 (286)
Q Consensus 47 ~~i~L~~~e~--~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~- 123 (286)
+.|+|..+++ ++++.+++++.+.+..... ......|+...+..++++++.+++. +|+..+. .+|++++|++
T Consensus 70 ~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~~--~~~~~~y~~~~g~~~lr~~ia~~~~--~g~~~~~--~~i~~t~G~~~ 143 (449)
T 3qgu_A 70 KIISLGIGDTTEPLPKYIADAMAKAAAGLAT--REGYSGYGAEQGQGALREAVASTFY--GHAGRAA--DEIFISDGSKC 143 (449)
T ss_dssp CCEECSSCCCCCCCCHHHHHHHHHHHHGGGG--SCCCCCSTTTTCCHHHHHHHHHHHH--TTTTCCG--GGEEEESCHHH
T ss_pred CEEEeeCCCCCCCCCHHHHHHHHHHHHhhcc--ccCCCCCCCCCCcHHHHHHHHHHHH--cCCCCCH--HHEEEccCHHH
Confidence 5799998887 4689999999887764210 0112234555667788888877776 5543222 3699999999
Q ss_pred HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceee----------eEEEecccCCCCCCCCHHHHHHHhhh
Q 023191 124 SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIF----------FETMPYRLNESTGYIDYDQLEKSATL 193 (286)
Q Consensus 124 a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~----------~~~v~~~~~~~~~~~d~e~l~~~i~~ 193 (286)
++..+ .+++++||+|+++++.|.++.. .+...|.. +..++++.+ +++..|++++ +
T Consensus 144 al~~~-~~l~~~gd~Vl~~~p~~~~~~~--------~~~~~g~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-----~ 208 (449)
T 3qgu_A 144 DIARI-QMMFGSKPTVAVQDPSYPVYVD--------TSVMMGMTGDHNGTGFDGIEYMVCNPD-NHFFPDLSKA-----K 208 (449)
T ss_dssp HHHHH-HHHHCSSSCEEEEESCCTHHHH--------HHHHHTCSCCBCSSSBTTEEEEECCGG-GTTCCCGGGC-----C
T ss_pred HHHHH-HHHhCCCCEEEEcCCCChhHHH--------HHHHcCCcccccccccceeEEEecccc-cCCcCChhHc-----C
Confidence 66645 8889999999999966665542 33445544 555554322 2456665432 3
Q ss_pred cCCcEEEEc-CCC-CCCccC---HHHHHHHHHhcCCEEEEeccccccccccCCCCC--CC---CcceEEEeCCCCCCC--
Q 023191 194 FRPKLIVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVIPS--PF---EYADVVTTTTHKSLR-- 261 (286)
Q Consensus 194 ~~tk~v~i~-~~n-~g~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~--~~---~~~D~v~~s~~K~l~-- 261 (286)
++++|+++ ++| +|...+ +++|+++|++||+++|+|++|............ .+ .+.++++.|++|+|+
T Consensus 209 -~~~~v~l~~p~NPtG~~~~~~~l~~l~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~ 287 (449)
T 3qgu_A 209 -RTDIIFFCSPNNPTGAAATRAQLTELVNFARKNGSILVYDAAYALYISNPDCPKTIYEIPGADEVAIETCSFSKYAGFT 287 (449)
T ss_dssp -CCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTEEEEEECSGGGTCT
T ss_pred -CCCEEEEeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchHhhhcCCCCCCCHhhccCCCCcEEEEecchhhcCCc
Confidence 79999997 666 666554 788899999999999999998764332111110 11 136789999999985
Q ss_pred CCCceEEEEecchhh
Q 023191 262 GPRGAMIFFRKGVKE 276 (286)
Q Consensus 262 gp~gG~l~~~~~~~~ 276 (286)
|.+.|++++++++.+
T Consensus 288 G~r~G~~~~~~~~~~ 302 (449)
T 3qgu_A 288 GVRLGWTVVPKALKY 302 (449)
T ss_dssp TCCCEEEECCTTCBC
T ss_pred cceeEEEecCHHHHh
Confidence 555699999988764
No 108
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=99.84 E-value=9.9e-21 Score=172.67 Aligned_cols=231 Identities=12% Similarity=0.071 Sum_probs=155.5
Q ss_pred ccccccccChHHHHHHHHHHHHH--HcCceecCC---CC--C--CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHH
Q 023191 23 LNAPLEVVDPEIADIIEHEKARQ--WKGLELIPS---EN--F--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMA 93 (286)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~--~~~i~L~~~---e~--~--~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l 93 (286)
+.+++...+++.+..+....... .+.|+|..| ++ . +++.+++++.+.+......+ |+...+..++
T Consensus 24 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~l~~G~y~d~~~~~~~~~~v~~a~~~~~~~~~~~~------Y~~~~g~~~l 97 (420)
T 4f4e_A 24 LFSAVELAPRDPILGLNEAFNADTRPTKVNLGVGVYTNEDGKIPLLRAVRDAEKARVEAGLPRG------YLPIDGIAAY 97 (420)
T ss_dssp TTTTCCCCCCCHHHHHHHHHHHCCCSSCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHTCCCCC------CCCTTCCHHH
T ss_pred HhhcCCcCCCChHHHHHHHHHhcCCCCcEEeeeeeeECCCCCccCcHHHHHHHHHHhccCCCCC------CCCCCCcHHH
Confidence 45667777777665555544332 367999888 33 2 34899999988876522112 3444667888
Q ss_pred HHHHHHHHHHHCCC--CCCCcceeEEeCCChH-HHHHH--HHHhcCCCCeEEeccCCCCcccCccccccccccccceeee
Q 023191 94 ESLCQKRALEAFRL--DPEKWGVNVQSLSGSP-SNFQV--YTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFF 168 (286)
Q Consensus 94 ~~~~~~~~~~~~g~--~~~~~~~~v~~~sG~~-a~~~~--l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 168 (286)
++++.+++....+. +++. .+|++|+|++ ++.++ +.++++|||+|++++|.|.+ +...+...|.++
T Consensus 98 r~~ia~~l~~~~~~~~~~~~--~~i~~t~G~t~al~~~~~~~~~~~~gd~Vlv~~p~~~~--------~~~~~~~~g~~~ 167 (420)
T 4f4e_A 98 DASVQKLLLGDDSPLIAAGR--VVTAQALGGTGALKIGADFLRTLNPKAKVAISDPSWEN--------HRALFDMAGFEV 167 (420)
T ss_dssp HHHHHHHHHCTTCHHHHTTC--EEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCHH--------HHHHHHHTTCCE
T ss_pred HHHHHHHhcCCCccccccCc--eEEEECCccHHHHHHHHHHHHHhCCCCEEEEeCCCcHh--------HHHHHHHcCCeE
Confidence 88888888665442 3331 1599999999 77766 45678999999999955544 333555677777
Q ss_pred EEEecccCCCCCCCCHHHHHHHhhh--cCCcEEEEc-CCC-CCCcc---CHHHHHHHHHhcCCEEEEeccccccccccCC
Q 023191 169 ETMPYRLNESTGYIDYDQLEKSATL--FRPKLIVAG-ASA-YARLY---DYERIRKVCNKQKAIMLADMAHISGLVAAGV 241 (286)
Q Consensus 169 ~~v~~~~~~~~~~~d~e~l~~~i~~--~~tk~v~i~-~~n-~g~~~---~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~ 241 (286)
+.+++. +.+++.+|++++++.+++ .++++++++ ++| +|... ++++|+++|++||+++|+|++|.......+.
T Consensus 168 ~~v~~~-~~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~ 246 (420)
T 4f4e_A 168 VAYPYY-DAKTNGVNFDGMLAALNGYEPGTIVVLHACCHNPTGVDLNDAQWAQVVEVVKARRLVPFLDIAYQGFGESIEA 246 (420)
T ss_dssp EEEECE-ETTTTEECHHHHHHHHTTCCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCTTG
T ss_pred EEeeee-ccccCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEccccccccCCcch
Confidence 667642 225688999999999973 267888887 666 67554 4778999999999999999997533221100
Q ss_pred CCC------CCCcceEEEeCCCCCCC--CCCceEEEE
Q 023191 242 IPS------PFEYADVVTTTTHKSLR--GPRGAMIFF 270 (286)
Q Consensus 242 ~~~------~~~~~D~v~~s~~K~l~--gp~gG~l~~ 270 (286)
... .....++++.|++|+|+ |.+.|++++
T Consensus 247 ~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~ 283 (420)
T 4f4e_A 247 DAAAVRLFAAANLNVFVSSSFSKSFSLYGERVGALSI 283 (420)
T ss_dssp GGHHHHHHHHTTCCEEEEEECTTTTTCGGGCEEEEEE
T ss_pred hhHHHHHHHhcCCCEEEEEeCCccCcCcCCCcEEEEE
Confidence 000 01125688999999885 444588865
No 109
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.84 E-value=3.9e-21 Score=175.65 Aligned_cols=211 Identities=15% Similarity=0.086 Sum_probs=147.9
Q ss_pred HcCceecCCCC----CCCHHHHHHhccccccCC--CCCCCCCcccCCcchHHHHHHHHHHHHHHHCC---CCCCCcceeE
Q 023191 46 WKGLELIPSEN----FTSVSVMQAVGSVMTNKY--SEGYPGARYYGGNEYIDMAESLCQKRALEAFR---LDPEKWGVNV 116 (286)
Q Consensus 46 ~~~i~L~~~e~----~~~~~v~~a~~~~l~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g---~~~~~~~~~v 116 (286)
.+.|+|..+.+ .+++.+.+++.+.+.... ..+ |+...+..++++++.+++.+.+| ++++ +|
T Consensus 43 ~~~idl~~g~~~~~~~~~~~v~~a~~~~~~~~~~~~~~------y~~~~g~~~lr~~la~~l~~~~g~~~~~~~----~v 112 (425)
T 1vp4_A 43 KDAISFGGGVPDPETFPRKELAEIAKEIIEKEYHYTLQ------YSTTEGDPVLKQQILKLLERMYGITGLDED----NL 112 (425)
T ss_dssp TTCEECCCCSCCGGGSCHHHHHHHHHHHHHHSHHHHTS------CCCTTCCHHHHHHHHHHHHHHHCCCSCCGG----GE
T ss_pred CCceeCCCCCCCcccCCHHHHHHHHHHHHhhcchhhcC------CCCCCCCHHHHHHHHHHHHhccCCCCCCcc----cE
Confidence 46789977654 256889999888775410 012 23334567899888888888778 4443 59
Q ss_pred EeCCChH-HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhh--
Q 023191 117 QSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATL-- 193 (286)
Q Consensus 117 ~~~sG~~-a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~-- 193 (286)
++|+|++ ++.+++.+++++||+|+++++.|.++ ...+...|.+++.+++ +. + .+|++++++.+++
T Consensus 113 ~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~--------~~~~~~~g~~~~~v~~--~~-~-~~d~~~l~~~l~~~~ 180 (425)
T 1vp4_A 113 IFTVGSQQALDLIGKLFLDDESYCVLDDPAYLGA--------INAFRQYLANFVVVPL--ED-D-GMDLNVLERKLSEFD 180 (425)
T ss_dssp EEEEHHHHHHHHHHHHHCCTTCEEEEEESCCHHH--------HHHHHTTTCEEEEEEE--ET-T-EECHHHHHHHHHHHH
T ss_pred EEeccHHHHHHHHHHHhCCCCCEEEEeCCCcHHH--------HHHHHHcCCEEEEecc--CC-C-CCCHHHHHHHHHhhh
Confidence 9999999 88778999999999999999655544 3344556766665654 42 2 3899999998875
Q ss_pred -----cCCcEEE-Ec-CCC-CCCccC---HHHHHHHHHhcCCEEEEeccccccccccCCCCCCC-----CcceEEEeCCC
Q 023191 194 -----FRPKLIV-AG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPF-----EYADVVTTTTH 257 (286)
Q Consensus 194 -----~~tk~v~-i~-~~n-~g~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~-----~~~D~v~~s~~ 257 (286)
.++++|+ ++ ++| +|...+ +++|+++|++||+++|+|++|+........ ...+ .+.++++.|++
T Consensus 181 ~~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~-~~~~~~~~~~~~~i~~~s~s 259 (425)
T 1vp4_A 181 KNGKIKQVKFIYVVSNFHNPAGVTTSLEKRKALVEIAEKYDLFIVEDDPYGALRYEGET-VDPIFKIGGPERVVLLNTFS 259 (425)
T ss_dssp HTTCGGGEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECSSTTCBCSSCC-CCCHHHHHCTTTEEEEEEST
T ss_pred hcccCCCceEEEECCCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCC-CcCHHHhCCCCCEEEEeccc
Confidence 3688885 55 656 676655 678999999999999999998764332111 1111 12578899999
Q ss_pred CCCC-CCCceEEEEecchhhhhc
Q 023191 258 KSLR-GPRGAMIFFRKGVKEINK 279 (286)
Q Consensus 258 K~l~-gp~gG~l~~~~~~~~~~~ 279 (286)
|+|+ |.+.|++++++++.+..+
T Consensus 260 K~~~~G~r~G~~~~~~~~~~~l~ 282 (425)
T 1vp4_A 260 KVLAPGLRIGMVAGSKEFIRKIV 282 (425)
T ss_dssp TTTCGGGCEEEEECCHHHHHHHH
T ss_pred cccccccceEEEeeCHHHHHHHH
Confidence 9987 223499999987765544
No 110
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=99.83 E-value=2e-20 Score=173.65 Aligned_cols=178 Identities=12% Similarity=-0.014 Sum_probs=131.6
Q ss_pred cCCcchHHHHHHHHHHHHHHHCCCCCCCc-----ceeEEeCCChH-HHHHHHHHhc-------------------CCCCe
Q 023191 84 YGGNEYIDMAESLCQKRALEAFRLDPEKW-----GVNVQSLSGSP-SNFQVYTALL-------------------KPHDR 138 (286)
Q Consensus 84 ~~~~~~~~~l~~~~~~~~~~~~g~~~~~~-----~~~v~~~sG~~-a~~~~l~a~~-------------------~~Gd~ 138 (286)
|...+...++|+++.+++++++|.+.+.. ....++|+|++ +++.++.+.. .|++.
T Consensus 105 ~~~~p~~~~lE~~v~~~l~~~~g~~~~~~~~~~~~~~gv~t~ggt~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~~ 184 (475)
T 3k40_A 105 WIASPACTELEVVMMDWLGKMLELPAEFLACSGGKGGGVIQGTASESTLVALLGAKAKKLKEVKELHPEWDEHTILGKLV 184 (475)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHTTCCGGGCGGGTSSCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHEE
T ss_pred ccCCcHHHHHHHHHHHHHHHHhCCCchhccccCCCCCeEEcCchHHHHHHHHHHHHHHHHHHhhccCcccccccccCCeE
Confidence 45567888999999999999999974200 01366777777 7776665541 14578
Q ss_pred EEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcC-----CcEEEEc-CCC-CCCccC
Q 023191 139 IMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFR-----PKLIVAG-ASA-YARLYD 211 (286)
Q Consensus 139 Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~-----tk~v~i~-~~n-~g~~~~ 211 (286)
|+++...|.++.. .+.+.|.+++.+| ++ +++ +|+++|++++++.+ |++|+++ ++| +|.+.|
T Consensus 185 vi~s~~~H~s~~~--------~~~~~g~~~~~v~--~d-~~~-~d~~~L~~~i~~~~~~~~~~~~v~~~~~~t~~G~~~~ 252 (475)
T 3k40_A 185 GYCSDQAHSSVER--------AGLLGGVKLRSVQ--SE-NHR-MRGAALEKAIEQDVAEGLIPFYAVVTLGTTNSCAFDY 252 (475)
T ss_dssp EEEETTSCHHHHH--------HHHHHTCEEEEEC--CB-TTB-CCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCC
T ss_pred EEECCCchHHHHH--------HHHHcCCceEEEE--CC-CCC-cCHHHHHHHHHHHHHCCCccEEEEEEecCCCCcCcCC
Confidence 9999988877654 3345676666665 45 467 99999999997621 5666665 554 789999
Q ss_pred HHHHHHHHHhcCCEEEEeccccccccccCCCCC---CCCcceEEEeCCCCCCCCCCc-eEEEEecc
Q 023191 212 YERIRKVCNKQKAIMLADMAHISGLVAAGVIPS---PFEYADVVTTTTHKSLRGPRG-AMIFFRKG 273 (286)
Q Consensus 212 l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~---~~~~~D~v~~s~~K~l~gp~g-G~l~~~~~ 273 (286)
+++|+++|++||+++|+|+||+.+......... .+..+|++++++|||+++|.| |+++++++
T Consensus 253 l~~I~~la~~~~~~lhvD~A~~~~~~~~~~~~~~~~gi~~~Ds~~~~~hK~l~~p~g~g~l~~~~~ 318 (475)
T 3k40_A 253 LDECGPVGNKHNLWIHVDAAYAGSAFICPEYRHLMKGIESADSFNFNPHKWMLVNFDCSAMWLKDP 318 (475)
T ss_dssp HHHHHHHHHHTTCEEEEECTTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSSCCSSCEEEEESSG
T ss_pred HHHHHHHHHHhCCeEEEeHHhHHHHHhCHhhHHHhcCcccCCEEEECchhccCCCCceEEEEEeCH
Confidence 999999999999999999999877554322211 223479999999999999999 99999875
No 111
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=99.83 E-value=1e-20 Score=167.74 Aligned_cols=205 Identities=19% Similarity=0.184 Sum_probs=136.0
Q ss_pred cCceecCCCC-CCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChHHH
Q 023191 47 KGLELIPSEN-FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSN 125 (286)
Q Consensus 47 ~~i~L~~~e~-~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~a~ 125 (286)
+.|+|..+++ ++++.+++++.+..... ..|+......+++ +.+++++|.+. .+++++|+.++
T Consensus 4 ~~i~~~~~~~~~p~~~~~~a~~~~~~~~--------~~y~~~~~~~~l~----~~la~~~g~~~-----~~~~~~gt~a~ 66 (347)
T 1jg8_A 4 MMIDLRSDTVTKPTEEMRKAMAQAEVGD--------DVYGEDPTINELE----RLAAETFGKEA-----ALFVPSGTMGN 66 (347)
T ss_dssp -CEECSCGGGCCCCHHHHHHHHTCCCCC--------GGGTCCHHHHHHH----HHHHHHHTCSE-----EEEESCHHHHH
T ss_pred eEEEeccccCCCCCHHHHHHHhcCCCCC--------cccCCChHHHHHH----HHHHHHhCCce-----EEEecCcHHHH
Confidence 3578877776 46788999887654211 1233344555555 77777788753 35566665577
Q ss_pred HHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhc-----CCcEEE
Q 023191 126 FQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF-----RPKLIV 200 (286)
Q Consensus 126 ~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~-----~tk~v~ 200 (286)
.+++.++++|||+|+++++.|.+.+... ..+...|.+++.+ .+ +++.+|++++++++++. +|++|+
T Consensus 67 ~~~~~~~~~~gd~Vl~~~~~~~~~~~~~-----~~~~~~g~~~~~v---~~-~~~~~d~~~l~~~i~~~~~~~~~~~~v~ 137 (347)
T 1jg8_A 67 QVSIMAHTQRGDEVILEADSHIFWYEVG-----AMAVLSGVMPHPV---PG-KNGAMDPDDVRKAIRPRNIHFPRTSLIA 137 (347)
T ss_dssp HHHHHHHCCTTCEEEEETTCHHHHSSTT-----HHHHHTCCEEEEE---CE-ETTEECHHHHHHHSCCSCTTSCCEEEEE
T ss_pred HHHHHHhcCCCCEEEEcCcchhhhcccc-----chhhccCeEEEEe---cC-CCCccCHHHHHHHhccccccccCceEEE
Confidence 7788899999999999996665432211 0123455544433 22 35678999999998752 688998
Q ss_pred Ec-CCC-C-CCccC---HHHHHHHHHhcCCEEEEeccccccccc-cCCCCCCC-CcceEEEeCCCCCCCCCCceEEEEec
Q 023191 201 AG-ASA-Y-ARLYD---YERIRKVCNKQKAIMLADMAHISGLVA-AGVIPSPF-EYADVVTTTTHKSLRGPRGAMIFFRK 272 (286)
Q Consensus 201 i~-~~n-~-g~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~-~~~~~~~~-~~~D~v~~s~~K~l~gp~gG~l~~~~ 272 (286)
++ ++| + |...+ +++|.++|++||+++|+|++|..+... .+.....+ .++|.+++|+||++++|.||+++.++
T Consensus 138 ~~~~~npt~G~~~~~~~l~~i~~~a~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~l~~~~G~~~~~~~ 217 (347)
T 1jg8_A 138 IENTHNRSGGRVVPLENIKEICTIAKEHGINVHIDGARIFNASIASGVPVKEYAGYADSVMFCLSKGLCAPVGSVVVGDR 217 (347)
T ss_dssp EESSBTTTTSBCCCHHHHHHHHHHHHHHTCEEEEEETTHHHHHHHHCCCHHHHHHTCSEEEEESSSTTCCSSCEEEEECH
T ss_pred EeccccccCCccCcHHHHHHHHHHHHHCCCEEEeehhhhhcchhhcCCChHHhcccccEEEEecccccCCCceEEEEcCH
Confidence 87 665 6 76655 578899999999999999998654221 12211111 14788888999999888777777776
Q ss_pred chhhh
Q 023191 273 GVKEI 277 (286)
Q Consensus 273 ~~~~~ 277 (286)
++.+.
T Consensus 218 ~~~~~ 222 (347)
T 1jg8_A 218 DFIER 222 (347)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66543
No 112
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=99.83 E-value=5.6e-20 Score=171.63 Aligned_cols=221 Identities=12% Similarity=0.040 Sum_probs=152.2
Q ss_pred HHcCceecCCCCCCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-
Q 023191 45 QWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP- 123 (286)
Q Consensus 45 ~~~~i~L~~~e~~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~- 123 (286)
..+.++|..+....|..+++++.+.+.... + .....|+...+..++++++.+++.+.+|.+.+. .+|++|+|++
T Consensus 94 ~p~~i~~~~~~~~~p~~~~~~a~~~l~~~~--~-~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~--~~i~~t~G~~~ 168 (500)
T 3tcm_A 94 HPDLLQREEIKTLFSADSISRAKQILAMIP--G-RATGAYSHSQGIHGLRDAIASGIASRDGFPANA--DDIFLTDGASP 168 (500)
T ss_dssp SGGGGGCTTHHHHSCHHHHHHHHHHHTTST--T-SCSSSCCCTTCCHHHHHHHHHHHHHHHSSCCCG--GGEEEESSSHH
T ss_pred CcccccCCCCcccCCHHHHHHHHHHHHcCC--C-CcCCCcCCCcChHHHHHHHHHHHHhhcCCCCCc--ccEEEcCCHHH
Confidence 345566655422357777777766665421 0 012335666778899999999998888854322 3699999999
Q ss_pred HHHHHHHHhc-CCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhc-----CCc
Q 023191 124 SNFQVYTALL-KPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF-----RPK 197 (286)
Q Consensus 124 a~~~~l~a~~-~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~-----~tk 197 (286)
++..++.+++ ++||.|+++++.|.++ ...+...|..++.++++.+ +++.+|+++|++.+++. ++|
T Consensus 169 al~~~~~~l~~~~gd~Vlv~~p~y~~~--------~~~~~~~g~~~~~~~~~~~-~~~~~d~~~l~~~l~~~~~~~~~~k 239 (500)
T 3tcm_A 169 GVHLMMQLLIRNEKDGILVPIPQYPLY--------SASIALHGGALVPYYLNES-TGWGLETSDVKKQLEDARSRGINVR 239 (500)
T ss_dssp HHHHHHHHHCCSTTEEEEEEESCCTHH--------HHHHHHTTCEEEEEECBTT-TTSBCCHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHcCCCCCEEEEeCCCcHhH--------HHHHHHcCCEEEEEecccc-cCCCCCHHHHHHHHHHHHhcCCCce
Confidence 8877888988 8999999999555544 3355567766666654422 35799999999999763 688
Q ss_pred EEEEc-CCC-CCCccC---HHHHHHHHHhcCCEEEEeccccccccccCCCCCC-------C----Ccc-eEEEeCCCCCC
Q 023191 198 LIVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVIPSP-------F----EYA-DVVTTTTHKSL 260 (286)
Q Consensus 198 ~v~i~-~~n-~g~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~-------~----~~~-D~v~~s~~K~l 260 (286)
+|+++ ++| +|...+ +++|+++|++||+++|+|++|.......+..... + ... .+++.|++|+|
T Consensus 240 ~ivl~~p~NPtG~~~s~~~l~~i~~la~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~ 319 (500)
T 3tcm_A 240 ALVVINPGNPTGQVLAEENQYDIVKFCKNEGLVLLADEVYQENIYVDNKKFHSFKKIVRSLGYGEEDLPLVSYQSVSKGY 319 (500)
T ss_dssp EEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTTCSSSCCCEEEEEESSSTT
T ss_pred EEEEECCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccccccCCCCCCCcHHHHHHHhccccCCeEEEEEecCCccC
Confidence 88886 766 676655 6677888999999999999987654432211111 0 112 26688999998
Q ss_pred C---CCCceEEEE---ecchhhhhc
Q 023191 261 R---GPRGAMIFF---RKGVKEINK 279 (286)
Q Consensus 261 ~---gp~gG~l~~---~~~~~~~~~ 279 (286)
. |.++|++.+ ++++.+.++
T Consensus 320 ~g~~G~R~G~~~~~~~~~~~~~~l~ 344 (500)
T 3tcm_A 320 YGECGKRGGYFEITGFSAPVREQIY 344 (500)
T ss_dssp TCCGGGCCEEEEEESCCTTHHHHHH
T ss_pred CCCCccceEEEEEeCCCHHHHHHHH
Confidence 3 667799988 677766554
No 113
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=99.83 E-value=5.8e-20 Score=170.43 Aligned_cols=206 Identities=11% Similarity=0.096 Sum_probs=145.0
Q ss_pred ceecCCCCCCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-HHHH
Q 023191 49 LELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQ 127 (286)
Q Consensus 49 i~L~~~e~~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~ 127 (286)
+.|........+.+.+++.+.+.. |+ .|+. ....++..++++++++++++++|++. .+++++|++ ++..
T Consensus 69 ~~lg~~~~~~~p~v~~~~~~~~~~-~~-~~~~---~~~~~g~~~l~~~l~~~la~~~g~~~-----~~~~~~ggt~a~~~ 138 (474)
T 1wyu_B 69 YPLGSCTMKYNPKLHEEAARLFAD-LH-PYQD---PRTAQGALRLMWELGEYLKALTGMDA-----ITLEPAAGAHGELT 138 (474)
T ss_dssp CCBTTTCCCCCCHHHHHHHHTTSS-CC-TTSC---GGGCHHHHHHHHHHHHHHHHHHTCSE-----EECCCSSHHHHHHH
T ss_pred cccccccccCCHHHHHHHHHHHHh-cC-CCCc---hhhChHHHHHHHHHHHHHHHHHCCCc-----eeecChHHHHHHHH
Confidence 455422223346666776654322 21 1111 01246778899999999999999875 366767776 6665
Q ss_pred HHHHh----cCCCC-----eEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcE
Q 023191 128 VYTAL----LKPHD-----RIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKL 198 (286)
Q Consensus 128 ~l~a~----~~~Gd-----~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~ 198 (286)
++.++ .++|| +|+++++.|+++.. .+...|.+++.++ .+ +++.+|+++|++++++ ++++
T Consensus 139 al~~~~~~~~~~Gd~~~r~~Vlv~~~~h~~~~~--------~~~~~G~~vv~v~--~~-~~~~~d~~~L~~~i~~-~t~~ 206 (474)
T 1wyu_B 139 GILIIRAYHEDRGEGRTRRVVLVPDSAHGSNPA--------TASMAGYQVREIP--SG-PEGEVDLEALKRELGP-HVAA 206 (474)
T ss_dssp HHHHHHHHHHHTTCTTTCCEEEEETTSCTHHHH--------HHHHTTCEEEEEC--BC-TTSSBCHHHHHHHCST-TEEE
T ss_pred HHHHHHHHHHhcCCccCCCEEEEeCCcChhhHH--------HHHHCCCEEEEec--CC-CCCCcCHHHHHHhhCC-CceE
Confidence 44443 46888 99999977776653 3446676666665 44 4688999999999987 8999
Q ss_pred EEEcCCC-CCCc-cCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCC-cceEEEeCCCCCCCCCC------ceEEE
Q 023191 199 IVAGASA-YARL-YDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFE-YADVVTTTTHKSLRGPR------GAMIF 269 (286)
Q Consensus 199 v~i~~~n-~g~~-~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~-~~D~v~~s~~K~l~gp~------gG~l~ 269 (286)
|+++.+| +|.. .++++|+++|++||+++|+|++|+.+... ... +.. ++|++++|+||+|++|. .|+++
T Consensus 207 v~~~~pn~~G~~~~~l~~i~~l~~~~g~~li~Dea~~~~~~g--~~~-~~~~g~di~~~s~~K~~~~p~g~gG~~~G~~~ 283 (474)
T 1wyu_B 207 LMLTNPNTLGLFERRILEISRLCKEAGVQLYYDGANLNAIMG--WAR-PGDMGFDVVHLNLHKTFTVPHGGGGPGSGPVG 283 (474)
T ss_dssp EEECSSCTTSCCCTTHHHHHHHHHHHTCEEEEEGGGGGGTTT--TCC-HHHHTCSEEECCTTTTTCCCCTTSCCCCCCEE
T ss_pred EEEECCCCCcccCCCHHHHHHHHHHcCCEEEEeCchhhhhcc--CCC-cccCCCcEEEEeCccccccCCCCCCCCeEEEE
Confidence 9998555 6766 69999999999999999999999766532 111 111 48999999999998763 49999
Q ss_pred Eecchhhhhc
Q 023191 270 FRKGVKEINK 279 (286)
Q Consensus 270 ~~~~~~~~~~ 279 (286)
+++++.+...
T Consensus 284 ~~~~l~~~l~ 293 (474)
T 1wyu_B 284 VKAHLAPYLP 293 (474)
T ss_dssp ECGGGGGGCC
T ss_pred EcHHHHHhCC
Confidence 9998766554
No 114
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=99.83 E-value=4.3e-20 Score=168.70 Aligned_cols=220 Identities=13% Similarity=0.096 Sum_probs=147.5
Q ss_pred cCceecCCCCCC-CHHHHHHhccccccCC-CCC---CCCCcccCCcchHHHHHHHHHHHHHHHCC----CCCCCcceeEE
Q 023191 47 KGLELIPSENFT-SVSVMQAVGSVMTNKY-SEG---YPGARYYGGNEYIDMAESLCQKRALEAFR----LDPEKWGVNVQ 117 (286)
Q Consensus 47 ~~i~L~~~e~~~-~~~v~~a~~~~l~~~~-~~~---~~~~~~~~~~~~~~~l~~~~~~~~~~~~g----~~~~~~~~~v~ 117 (286)
+.++|..++++. ++.+.+++.+...... .++ ......|+...+..++++++.+++.+.+| ++++ +|+
T Consensus 37 ~~i~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~~~~~~g~~~~~~~~----~i~ 112 (428)
T 1iay_A 37 GVIQMGLAENQLCLDLIEDWIKRNPKGSICSEGIKSFKAIANFQDYHGLPEFRKAIAKFMEKTRGGRVRFDPE----RVV 112 (428)
T ss_dssp SBEECSSCCCCSSHHHHHHHHHHCTTSSTTC----CHHHHHHCCCTTCCHHHHHHHHHHHHHHTTTCSCCCTT----SCE
T ss_pred ceeeeccccchhhHHHHHHHHHhccccccccccccccHhhcCCCCCCCcHHHHHHHHHHHHHhcCCCCCCChh----hEE
Confidence 457888888864 5567777764321000 000 00011234444567899999999988888 4443 599
Q ss_pred eCCChH-HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCC-CCCCCCHHHHHHHhhh--
Q 023191 118 SLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNE-STGYIDYDQLEKSATL-- 193 (286)
Q Consensus 118 ~~sG~~-a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~-~~~~~d~e~l~~~i~~-- 193 (286)
+++|++ ++.+++.+++++||+|+++++.|.++... .....|..++.++ .+. +++.+|++++++.+++
T Consensus 113 ~~~G~~~ai~~~~~~~~~~gd~Vl~~~p~y~~~~~~-------~~~~~g~~~~~v~--~~~~~~~~~d~~~l~~~l~~~~ 183 (428)
T 1iay_A 113 MAGGATGANETIIFCLADPGDAFLVPSPYYPAFNRD-------LRWRTGVQLIPIH--CESSNNFKITSKAVKEAYENAQ 183 (428)
T ss_dssp EEEHHHHHHHHHHHHHCCTTCEEEEESSCCTTHHHH-------TTTTTCCEEEEEC--CCTTTTTCCCHHHHHHHHHHHH
T ss_pred EccChHHHHHHHHHHhCCCCCeEEEccCCCcchHHH-------HHHhcCCEEEEee--cCCccCCcCCHHHHHHHHHHHH
Confidence 999998 88778999999999999999777665321 1124565555555 332 3568899999998864
Q ss_pred ---cCCcEEEEc-CCC-CCCccC---HHHHHHHHHhcCCEEEEeccccccccccCCCCC--CC-Cc-------ce--EEE
Q 023191 194 ---FRPKLIVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVIPS--PF-EY-------AD--VVT 253 (286)
Q Consensus 194 ---~~tk~v~i~-~~n-~g~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~--~~-~~-------~D--~v~ 253 (286)
.++++|+++ ++| +|...+ +++|+++|++||+++|+|++|+........... .+ .. .| +++
T Consensus 184 ~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~viv~ 263 (428)
T 1iay_A 184 KSNIKVKGLILTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFDTPQFVSIAEILDEQEMTYCNKDLVHIV 263 (428)
T ss_dssp HTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECTTGGGCCSSSCCCCHHHHHTSGGGTTSCTTSEEEE
T ss_pred hcCCceEEEEEcCCCCCCCCcCCHHHHHHHHHHHHHCCeEEEEeccccccccCCCCccCHHHhccccccccCCCCcEEEE
Confidence 268888887 766 777778 899999999999999999998764332111111 01 01 46 889
Q ss_pred eCCCCCCC--CCCceEEEE-ecchhhhhc
Q 023191 254 TTTHKSLR--GPRGAMIFF-RKGVKEINK 279 (286)
Q Consensus 254 ~s~~K~l~--gp~gG~l~~-~~~~~~~~~ 279 (286)
.|+||+|+ |.+.|++++ ++++.+..+
T Consensus 264 ~s~sK~~g~~Glr~G~~~~~~~~~~~~~~ 292 (428)
T 1iay_A 264 YSLSKDMGLPGFRVGIIYSFNDDVVNCAR 292 (428)
T ss_dssp EESTTTSSCGGGCEEEEEESCHHHHHHHH
T ss_pred ecchhhcCCCCceEEEEEeCCHHHHHHHH
Confidence 99999984 334599998 455665544
No 115
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=99.83 E-value=2.4e-20 Score=166.93 Aligned_cols=189 Identities=17% Similarity=0.157 Sum_probs=133.8
Q ss_pred CCCCCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-HHHHHHHHh
Q 023191 54 SENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTAL 132 (286)
Q Consensus 54 ~e~~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l~a~ 132 (286)
+.+++++.+++++.+.+.+.+ .++ .....+ +++.+++++|.+ ++++++|++ ++.+++.++
T Consensus 7 ~~~~~~~~v~~a~~~~~~~~~--~~~-------~~~~~~----l~~~la~~~~~~------~v~~~~ggt~al~~~~~~~ 67 (375)
T 2fnu_A 7 SEPCLDKEDKKAVLEVLNSKQ--LTQ-------GKRSLL----FEEALCEFLGVK------HALVFNSATSALLTLYRNF 67 (375)
T ss_dssp CCCCCCHHHHHHHHHHHTSSC--CSS-------SHHHHH----HHHHHHHHHTCS------EEEEESCHHHHHHHHHHHS
T ss_pred CCCCCCHHHHHHHHHHHHcCc--ccC-------ChHHHH----HHHHHHHHhCCC------eEEEeCCHHHHHHHHHHHh
Confidence 566789999999999886522 111 233344 557778888876 288888888 888899999
Q ss_pred ---cCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCCc
Q 023191 133 ---LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARL 209 (286)
Q Consensus 133 ---~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~~~n~g~~ 209 (286)
+++||+|+++++.|.++.. .+...|.+++.++ .+ +++.+|++++++.+++ ++++|+++.+ +|..
T Consensus 68 ~~~~~~gd~Vl~~~~~~~~~~~--------~~~~~g~~~~~~~--~~-~~~~~d~~~l~~~i~~-~~~~v~~~~~-tG~~ 134 (375)
T 2fnu_A 68 SEFSADRNEIITTPISFVATAN--------MLLESGYTPVFAG--IK-NDGNIDELALEKLINE-RTKAIVSVDY-AGKS 134 (375)
T ss_dssp SCCCTTSCEEEECSSSCTHHHH--------HHHHTTCEEEECC--BC-TTSSBCGGGSGGGCCT-TEEEEEEECG-GGCC
T ss_pred cccCCCCCEEEECCCccHhHHH--------HHHHCCCEEEEec--cC-CCCCCCHHHHHhhcCc-CceEEEEeCC-cCCc
Confidence 8999999999977776644 2334565555454 55 3347999999999887 8898877644 8888
Q ss_pred cCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCCcceEEEeCCCCCCCCCCc-eEEEE-e-cchhh
Q 023191 210 YDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFF-R-KGVKE 276 (286)
Q Consensus 210 ~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~g-G~l~~-~-~~~~~ 276 (286)
.|+++|.++|++||+++|+|++|+.|....+.....+..+++.++|+||++ || | |++++ + +++.+
T Consensus 135 ~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~i~~~s~s~~K~~-~~-g~g~~~~~~~~~~~~ 202 (375)
T 2fnu_A 135 VEVESVQKLCKKHSLSFLSDSSHALGSEYQNKKVGGFALASVFSFHAIKPI-TT-AEGGAVVTNDSELHE 202 (375)
T ss_dssp CCHHHHHHHHHHHTCEEEEECTTCTTCEETTEETTSSSSEEEEECCTTSSS-CC-SSCEEEEESCHHHHH
T ss_pred cCHHHHHHHHHHcCCEEEEECccccCCeECCeeccccCCeEEEeCCCCCCc-cc-cCceEEEeCCHHHHH
Confidence 999999999999999999999998876543211111111444456666988 55 5 77766 4 34543
No 116
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=99.83 E-value=7e-20 Score=166.52 Aligned_cols=207 Identities=16% Similarity=0.151 Sum_probs=145.8
Q ss_pred cCceecCCCC------CCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHH------CC--CCCCCc
Q 023191 47 KGLELIPSEN------FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEA------FR--LDPEKW 112 (286)
Q Consensus 47 ~~i~L~~~e~------~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~------~g--~~~~~~ 112 (286)
+.++|..+.+ ++++.+++++.+.+......+ |+...+..++++++.+++.+. .| ++++
T Consensus 34 ~~i~l~~g~p~~~~~~~~~~~v~~a~~~~~~~~~~~~------y~~~~~~~~lr~~la~~~~~~~~~~~~~~~~~~~~-- 105 (416)
T 1bw0_A 34 PIIKLSVGDPTLDKNLLTSAAQIKKLKEAIDSQECNG------YFPTVGSPEAREAVATWWRNSFVHKEELKSTIVKD-- 105 (416)
T ss_dssp CCEECCCCCTTTTSCSCCCHHHHHHHHHHHHTTCSSS------CCCTTCCHHHHHHHHHHHHHHHCCSTTTGGGCCGG--
T ss_pred CeEEecCcCCCcccCCCCCHHHHHHHHHHhhCCccCC------cCCCCCCHHHHHHHHHHHHhhhcccccCCCCCCcc--
Confidence 4688887752 468999999988875421112 333355678888888887732 33 3443
Q ss_pred ceeEEeCCChH-HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHh
Q 023191 113 GVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSA 191 (286)
Q Consensus 113 ~~~v~~~sG~~-a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i 191 (286)
+|++|+|++ ++.+++.+++++||+|+++++.|.++.. .+...|.+++.++++.+ +++.+|+++|++.+
T Consensus 106 --~v~~~~g~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~--------~~~~~g~~~~~v~~~~~-~~~~~d~~~l~~~l 174 (416)
T 1bw0_A 106 --NVVLCSGGSHGILMAITAICDAGDYALVPQPGFPHYET--------VCKAYGIGMHFYNCRPE-NDWEADLDEIRRLK 174 (416)
T ss_dssp --GEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHH--------HHHHTTCEEEEEEEEGG-GTTEECHHHHHHHC
T ss_pred --eEEEeCChHHHHHHHHHHhCCCCCEEEEcCCCcHhHHH--------HHHHcCcEEEEeecCcc-cCCCCCHHHHHHHh
Confidence 599999999 8887899999999999999966665432 34456666666654322 24679999999999
Q ss_pred hhcCCcEEEEc-CCC-CCCccC---HHHHHHHHHhcCCEEEEeccccccccccC----CCCC--CCC--cceEEEeCCCC
Q 023191 192 TLFRPKLIVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAG----VIPS--PFE--YADVVTTTTHK 258 (286)
Q Consensus 192 ~~~~tk~v~i~-~~n-~g~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~~~----~~~~--~~~--~~D~v~~s~~K 258 (286)
++ ++++++++ ++| +|...+ +++|+++|++||+++|+|++|+....... .... .+. ..++++.|++|
T Consensus 175 ~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~s~sK 253 (416)
T 1bw0_A 175 DD-KTKLLIVTNPSNPCGSNFSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPNATFTSVADFETTVPRVILGGTAK 253 (416)
T ss_dssp CT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCCSSCTTCCCCCTTSSCCSCCEEEEEESTT
T ss_pred cc-CCeEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCCCccCHHHccCCCcEEEEecchh
Confidence 87 78888886 766 677777 99999999999999999999876322211 1111 111 13477899999
Q ss_pred CCCCC--CceEEEEecc
Q 023191 259 SLRGP--RGAMIFFRKG 273 (286)
Q Consensus 259 ~l~gp--~gG~l~~~~~ 273 (286)
+|+.| +.|+++++++
T Consensus 254 ~~~~~Glr~G~~~~~~~ 270 (416)
T 1bw0_A 254 NLVVPGWRLGWLLYVDP 270 (416)
T ss_dssp TTSCGGGCCEEEEEECT
T ss_pred hCCCCCceEEEEEeeCc
Confidence 97544 4699998874
No 117
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=99.83 E-value=4.6e-20 Score=172.03 Aligned_cols=198 Identities=16% Similarity=0.081 Sum_probs=141.3
Q ss_pred CCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-HHHHHHHHh---
Q 023191 57 FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTAL--- 132 (286)
Q Consensus 57 ~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l~a~--- 132 (286)
+.++.+++++.....+.. ...|.......++|+.+++++++++|++... .+++|+|++ ++..++.+.
T Consensus 111 ~~~~~v~~~~~~~~~n~~------~~~~~~~~~~~~le~~~~~~la~~~g~~~~~---~~~~t~ggt~a~~~al~~ar~~ 181 (497)
T 2qma_A 111 PLMPAVAAEAMIAALNQS------MDSWDQASSATYVEQKVVNWLCDKYDLSEKA---DGIFTSGGTQSNQMGLMLARDW 181 (497)
T ss_dssp CBHHHHHHHHHHHHHCCC------TTCGGGCHHHHHHHHHHHHHHHHHTTCCTTC---EEEEESSHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHhhccc------ccchhhChHHHHHHHHHHHHHHHHhCCCCCC---CeEEcCCchHHHHHHHHHHHHH
Confidence 346777777655443311 1123444567899999999999999996533 588889888 777666662
Q ss_pred -c---------CC------CC-eEEeccCCCCcccCcccccccccccccee---eeEEEecccCCCCCCCCHHHHHHHhh
Q 023191 133 -L---------KP------HD-RIMALDLPHGGHLSHGYQTDTKKISAVSI---FFETMPYRLNESTGYIDYDQLEKSAT 192 (286)
Q Consensus 133 -~---------~~------Gd-~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~~~~~~~~d~e~l~~~i~ 192 (286)
+ .+ |+ .|+++...|.++.... ...|. .++.+| .+ +++.+|+++|+++++
T Consensus 182 ~~~~~~~~~~~~~G~~~~~g~~~v~~s~~~h~s~~~~~--------~~~g~g~~~v~~v~--~~-~~~~~d~~~L~~~i~ 250 (497)
T 2qma_A 182 IADKLSGHSIQKLGLPDYADKLRIVCSKKSHFTVQKSA--------SWMGLGEKAVMTVD--AN-ADGTMDITKLDEVIA 250 (497)
T ss_dssp HHHHHHCCCHHHHCSCGGGGGEEEEEETTSCTHHHHHH--------HHTTSCGGGEEEEC--BC-TTSSBCGGGHHHHHH
T ss_pred HHHhhcccchhhcccccccCCeEEEECCCchHHHHHHH--------HHcCCCcccEEEEe--cC-CCCcCCHHHHHHHHH
Confidence 3 13 46 7888887777664322 23332 455565 44 568999999999997
Q ss_pred hc---CCc--EEEEc-CCC-CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCC--CCCCCcceEEEeCCCCCCCCC
Q 023191 193 LF---RPK--LIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVI--PSPFEYADVVTTTTHKSLRGP 263 (286)
Q Consensus 193 ~~---~tk--~v~i~-~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~--~~~~~~~D~v~~s~~K~l~gp 263 (286)
+. .++ +|+++ ++| +|...|+++|+++|++||+++|+|+||+.+....+.. ...+..+|++++|+|||+++|
T Consensus 251 ~~~~~~~~~~~vv~~~~~~~tG~~~~l~~I~~l~~~~~~~l~vD~a~~~~~~~~~~~~~~~gi~~~D~i~~s~hK~l~~p 330 (497)
T 2qma_A 251 QAKAEGLIPFAIVGTAGTTDHGAIDDLDFIADMAVKHDMWMHVDGAYGGALILSSHKSRLKGVERAHSISVDFHKLFYQT 330 (497)
T ss_dssp HHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGGSTTGGGGTTGGGCSEEEEETTTTTCCC
T ss_pred HHHHCCCcceEEEEcCCCCCCCCCCCHHHHHHHHHHcCCEEEEehhhhHHHHhCcchHhhcCcccCCEEEEcchhccCCC
Confidence 62 244 66666 565 7899999999999999999999999998877654411 112235899999999999999
Q ss_pred Cc-eEEEEecch
Q 023191 264 RG-AMIFFRKGV 274 (286)
Q Consensus 264 ~g-G~l~~~~~~ 274 (286)
.+ |+++++++.
T Consensus 331 ~~~G~l~~~~~~ 342 (497)
T 2qma_A 331 ISCGALLVNDKS 342 (497)
T ss_dssp SSCEEEEESCGG
T ss_pred cceEEEEEeCHH
Confidence 88 999998753
No 118
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=99.83 E-value=6.5e-20 Score=165.08 Aligned_cols=193 Identities=16% Similarity=0.145 Sum_probs=137.3
Q ss_pred cCceecCCC--CCCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-
Q 023191 47 KGLELIPSE--NFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP- 123 (286)
Q Consensus 47 ~~i~L~~~e--~~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~- 123 (286)
..+++..++ .++++.+++++.. + + ....+++.+++.+++++|++.. .++++++|++
T Consensus 29 ~v~~~~~~~~~~~~~~~v~~a~~~-----~--~-----------~~~~~~~~~~~~~a~~~g~~~~---~~~~~~~ggt~ 87 (374)
T 2aeu_A 29 ALYDLSGLSGGFLIDEKDKALLNT-----Y--I-----------GSSYFAEKVNEYGLKHLGGDEN---DKCVGFNRTSS 87 (374)
T ss_dssp GCEECSSCCCCCCCCHHHHHHHTS-----T--T-----------HHHHHHHHHHHHHHHHHTCCTT---EEEEEESSHHH
T ss_pred ceeeecccCCCCCCCHHHHHHHHH-----h--c-----------CchHHHHHHHHHHHHHhCCCCc---ceEEEEcChHH
Confidence 467877654 4679999999961 2 1 1134556677888889998421 2477777777
Q ss_pred HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcE-EEEc
Q 023191 124 SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKL-IVAG 202 (286)
Q Consensus 124 a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~-v~i~ 202 (286)
++.+++.++ |||+|+++++.|++++.... .+...|.+++.+ .|++++++. ++ +|++ |+++
T Consensus 88 a~~~~~~~~--~gd~Vl~~~~~y~~~~~~~~-----~~~~~g~~~~~v----------~d~~~l~~~-~~-~~~~~v~~~ 148 (374)
T 2aeu_A 88 AILATILAL--KPKKVIHYLPELPGHPSIER-----SCKIVNAKYFES----------DKVGEILNK-ID-KDTLVIITG 148 (374)
T ss_dssp HHHHHHHHH--CCSEEEEECSSSSCCTHHHH-----HHHHTTCEEEEE----------SCHHHHHTT-CC-TTEEEEEEC
T ss_pred HHHHHHHhC--CCCEEEEecCCCCccHHHHH-----HHHHcCcEEEEe----------CCHHHHHhc-CC-CccEEEEEc
Confidence 887788877 99999999988877654211 223445444332 288999888 55 8999 8887
Q ss_pred -CCC-CC-CccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCC-cceEEEeCCCCCCCCCCceEEEEecchhhhh
Q 023191 203 -ASA-YA-RLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFE-YADVVTTTTHKSLRGPRGAMIFFRKGVKEIN 278 (286)
Q Consensus 203 -~~n-~g-~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~-~~D~v~~s~~K~l~gp~gG~l~~~~~~~~~~ 278 (286)
++| +| ...++++|.++|++||+++|+|++|+.+.........++. ++|++++|+||+++||++|++++++++.+..
T Consensus 149 ~p~nptG~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~di~~~S~sK~l~g~~~G~~~~~~~~~~~l 228 (374)
T 2aeu_A 149 STMDLKVIELENFKKVINTAKNKEAIVFVDDASGARVRLLFNQPPALKLGADLVVTSTDKLMEGPRGGLLAGKKELVDKI 228 (374)
T ss_dssp BCTTSCBCCHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHTTCCCHHHHTCSEEEEETTSSSSSCSCEEEEEEHHHHHHH
T ss_pred cCCCCCCCCcccHHHHHHHHHHcCCEEEEECCcccccccccccCCccccCCcEEEecCcccccCcceEEEEECHHHHHHH
Confidence 666 56 6789999999999999999999998765310011111111 4799999999999999889999998877655
Q ss_pred c
Q 023191 279 K 279 (286)
Q Consensus 279 ~ 279 (286)
+
T Consensus 229 ~ 229 (374)
T 2aeu_A 229 Y 229 (374)
T ss_dssp H
T ss_pred H
Confidence 4
No 119
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=99.83 E-value=4.3e-20 Score=163.96 Aligned_cols=204 Identities=17% Similarity=0.185 Sum_probs=140.7
Q ss_pred cCceecCCCC-CCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-H
Q 023191 47 KGLELIPSEN-FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-S 124 (286)
Q Consensus 47 ~~i~L~~~e~-~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a 124 (286)
..|+|..+.+ .+++.+++++.+.+.. +..+ |+.. .+.+++++++++++| .. .+|++++|++ +
T Consensus 8 ~~id~~~~~~~~~~~~v~~a~~~~~~~-~~~~------~~~~----~~~~~l~~~la~~~g-~~----~~v~~~~~gt~a 71 (356)
T 1v72_A 8 PALGFSSDNIAGASPEVAQALVKHSSG-QAGP------YGTD----ELTAQVKRKFCEIFE-RD----VEVFLVPTGTAA 71 (356)
T ss_dssp CCCBCSCGGGCCCCHHHHHHHHHTTSS-CCCS------TTCS----HHHHHHHHHHHHHHT-SC----CEEEEESCHHHH
T ss_pred ceEeeccCCccCCCHHHHHHHHhhccC-cccc------cccc----hHHHHHHHHHHHHhC-CC----CcEEEeCCccHH
Confidence 4567765533 4689999999876532 2111 2222 344556688888888 32 2578878877 8
Q ss_pred HHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccc--eeeeEEEecccCCCCCCCCHHHHHH-Hhhhc------C
Q 023191 125 NFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAV--SIFFETMPYRLNESTGYIDYDQLEK-SATLF------R 195 (286)
Q Consensus 125 ~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~v~~~~~~~~~~~d~e~l~~-~i~~~------~ 195 (286)
+.+++.++++|||+|+++++.|.++.... .+... |.+++.++ .+ ++.+|+++|++ ++++. +
T Consensus 72 ~~~al~~~~~~gd~vi~~~~~~~~~~~~~------~~~~~~~g~~~~~v~--~~--~~~~d~~~l~~~~i~~~~~~~~~~ 141 (356)
T 1v72_A 72 NALCLSAMTPPWGNIYCHPASHINNDECG------APEFFSNGAKLMTVD--GP--AAKLDIVRLRERTREKVGDVHTTQ 141 (356)
T ss_dssp HHHHHHTSCCTTEEEEECTTSHHHHSSTT------HHHHHTTSCEEEECC--CG--GGCCCHHHHHHHTTSSTTCTTSCE
T ss_pred HHHHHHHhcCCCCEEEEcCccchhhhhch------HHHHHhCCcEEEEec--CC--CCeEcHHHHHHHhhhcchhhccCC
Confidence 88788999999999999986665543320 12333 65555444 33 36899999999 88652 5
Q ss_pred CcEEEEc-CCCCCC---ccCHHHHHHHHHhcCCEEEEecccccccc-ccCCCCCCC---CcceEEEeCCCCCCCCCCc-e
Q 023191 196 PKLIVAG-ASAYAR---LYDYERIRKVCNKQKAIMLADMAHISGLV-AAGVIPSPF---EYADVVTTTTHKSLRGPRG-A 266 (286)
Q Consensus 196 tk~v~i~-~~n~g~---~~~l~~I~~ia~~~~~~vivD~a~~~g~~-~~~~~~~~~---~~~D~v~~s~~K~l~gp~g-G 266 (286)
+++|+++ ++|+|. ..++++|.++|++||+++|+|++|..+.. ..+.....+ .++|++++|+||+ ++|.| |
T Consensus 142 ~~~v~~~~~~~tG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~-g~~~G~g 220 (356)
T 1v72_A 142 PACVSITQATEVGSIYTLDEIEAIGDVCKSSSLGLHMDGSRFANALVSLGCSPAEMTWKAGVDALSFGATKN-GVLAAEA 220 (356)
T ss_dssp EEEEEEESSCTTSCCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCTTTTTGGGTCCEEEECCGGG-TCSSCEE
T ss_pred ceEEEEEcCCCCCccCCHHHHHHHHHHHHHcCCeEEEEchhhHhHhccCCCCHHHhhhhhcCCEEEEecccC-CCcCccE
Confidence 7899887 556786 55688999999999999999999875422 112222222 1488999999998 67888 7
Q ss_pred EEEEecchhhh
Q 023191 267 MIFFRKGVKEI 277 (286)
Q Consensus 267 ~l~~~~~~~~~ 277 (286)
++++++++.+.
T Consensus 221 ~~~~~~~~~~~ 231 (356)
T 1v72_A 221 IVLFNTSLATE 231 (356)
T ss_dssp EEESSGGGHHH
T ss_pred EEEECHHHHhh
Confidence 88888876654
No 120
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=99.83 E-value=3.7e-21 Score=172.56 Aligned_cols=191 Identities=13% Similarity=0.113 Sum_probs=136.9
Q ss_pred ceecCCCCCCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-HHHH
Q 023191 49 LELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQ 127 (286)
Q Consensus 49 i~L~~~e~~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~ 127 (286)
+++..+.+..++.+++++.+.+...+ |.......++| +.+++++|.+. +++++|++ ++..
T Consensus 6 ~~l~~~~~~~~~~~~~a~~~~~~~~~---------~~~~~~~~~l~----~~la~~~~~~~------~i~~~sgt~al~~ 66 (373)
T 3frk_A 6 ASFKPMHDEIEYEIKFKFEEIYKRNW---------FILGDEDKKFE----QEFADYCNVNY------CIGCGNGLDALHL 66 (373)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHTC---------CSSSHHHHHHH----HHHHHHHTSSE------EEEESCHHHHHHH
T ss_pred cCCCcccCCCCHHHHHHHHHHHHCCC---------ccCCchHHHHH----HHHHHHhCCCe------EEEeCCHHHHHHH
Confidence 34443444457788888888776522 12234455555 77777788752 45545555 8888
Q ss_pred HHHHh-cCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCC-
Q 023191 128 VYTAL-LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASA- 205 (286)
Q Consensus 128 ~l~a~-~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~~~n- 205 (286)
++.++ +++||+|+++.+.|.++.. .+...|.+++.++ .+++++.+|++++++++++ ++++|++ +|
T Consensus 67 ~l~~l~~~~gd~Vi~~~~~~~~~~~--------~~~~~g~~~~~~~--~~~~~~~~d~~~l~~~l~~-~~~~v~~--~n~ 133 (373)
T 3frk_A 67 ILKGYDIGFGDEVIVPSNTFIATAL--------AVSYTGAKPIFVE--PDIRTYNIDPSLIESAITE-KTKAIIA--VHL 133 (373)
T ss_dssp HHHHTTCCTTCEEEEETTSCTHHHH--------HHHHHSCEEEEEC--EETTTTEECGGGTGGGCCT-TEEEEEE--ECC
T ss_pred HHHHcCCCCcCEEEECCCCcHHHHH--------HHHHcCCEEEEEe--ccccccCcCHHHHHHhcCC-CCeEEEE--ECC
Confidence 99999 9999999999988777654 2345566565554 5545688999999999987 8888884 34
Q ss_pred CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCCcceEEEeC--CCCCCCC-CCceEEEEecc
Q 023191 206 YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTT--THKSLRG-PRGAMIFFRKG 273 (286)
Q Consensus 206 ~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s--~~K~l~g-p~gG~l~~~~~ 273 (286)
+|...++++|.++|+++|+++|+|++|+.|....+.... ...|++++| .||++++ +.||+++++++
T Consensus 134 ~G~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~--~~~d~~~~S~~~~K~l~~~g~gg~~~~~~~ 202 (373)
T 3frk_A 134 YGQPADMDEIKRIAKKYNLKLIEDAAQAHGSLYKGMKVG--SLGDAAGFSFYPAKNLGSLGDGGAVVTNDK 202 (373)
T ss_dssp TTCCCCHHHHHHHHHHHTCEEEEECTTCTTCEETTEETT--SSSSEEEEECCTTSSSCCSSSCEEEEESCH
T ss_pred CcCcccHHHHHHHHHHcCCEEEEECCcccCCEECCEecc--ccccEEEEeCcCCCccCccceeEEEEeCCH
Confidence 788899999999999999999999999987663221111 126888888 5599987 56799988764
No 121
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=99.83 E-value=2.2e-20 Score=169.59 Aligned_cols=206 Identities=15% Similarity=0.157 Sum_probs=139.6
Q ss_pred CceecCCCC-CCCHHHHHHhccccccCCCCCCCCCc-ccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-H
Q 023191 48 GLELIPSEN-FTSVSVMQAVGSVMTNKYSEGYPGAR-YYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-S 124 (286)
Q Consensus 48 ~i~L~~~e~-~~~~~v~~a~~~~l~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a 124 (286)
.+.|+.+.+ +.|+.+++++.+.+.+.+ +++... ++. .+.....+++++++++++|++++ +|++++|++ +
T Consensus 29 ~~yld~~~~~~~~~~v~~a~~~~l~~~~--~~~~~~~~~~--~~~~~~~~~l~~~la~~~g~~~~----~v~~~~g~t~a 100 (416)
T 1qz9_A 29 VIYLDGNSLGARPVAALARAQAVIAEEW--GNGLIRSWNS--AGWRDLSERLGNRLATLIGARDG----EVVVTDTTSIN 100 (416)
T ss_dssp CEECCTTTSCCCBTTHHHHHHHHHHTCC--CCCGGGHHHH--TSGGGHHHHHHHHHHTTTTCCTT----SEEECSCHHHH
T ss_pred eEeecCCCcCCCcHHHHHHHHHHHHHHH--hccCccccch--hhHHHHHHHHHHHHHHHcCCCcc----cEEEeCChhHH
Confidence 456665544 568889999988886533 221110 111 01123344567899999999764 488999988 6
Q ss_pred HHHHHHHhc------CCCCeEEec-cCCCCcccCccccccccccccc--eeeeEEEecccCCCCCCCCHHHHHHHhhhcC
Q 023191 125 NFQVYTALL------KPHDRIMAL-DLPHGGHLSHGYQTDTKKISAV--SIFFETMPYRLNESTGYIDYDQLEKSATLFR 195 (286)
Q Consensus 125 ~~~~l~a~~------~~Gd~Vl~~-~~~~~~~~~~~~~~~~~~~~~~--g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~ 195 (286)
+.+++.+++ ++||+|++. .+.|+++..+.... .... |.+++.+++ +++|++++++ +
T Consensus 101 l~~al~~~~~~~~~~~~gd~vii~~~~~~~~~~~~~~~~----~~~~~~g~~~~~v~~----------~~~l~~~i~~-~ 165 (416)
T 1qz9_A 101 LFKVLSAALRVQATRSPERRVIVTETSNFPTDLYIAEGL----ADMLQQGYTLRLVDS----------PEELPQAIDQ-D 165 (416)
T ss_dssp HHHHHHHHHHHHHHHSTTCCEEEEETTSCHHHHHHHHHH----HHHHCSSCEEEEESS----------GGGHHHHCST-T
T ss_pred HHHHHHhhcccccccCCCCcEEEEcCCCCCchHHHHHHH----HHHhcCCceEEEeCc----------HHHHHHHhCC-C
Confidence 655777766 899985554 45666543322110 1112 544444432 6788888887 8
Q ss_pred CcEEEEc-CCC-CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCCcceEEEeCCCCCC-CCCCc-eEEEEe
Q 023191 196 PKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSL-RGPRG-AMIFFR 271 (286)
Q Consensus 196 tk~v~i~-~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l-~gp~g-G~l~~~ 271 (286)
+++|+++ ++| +|...|+++|.++|++||+++|+|++|+.|....+.... ++|++++|+||++ +|+++ |+++++
T Consensus 166 ~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~---~~d~~~~s~~K~l~~g~~~~g~l~~~ 242 (416)
T 1qz9_A 166 TAVVMLTHVNYKTGYMHDMQALTALSHECGALAIWDLAHSAGAVPVDLHQA---GADYAIGCTYKYLNGGPGSQAFVWVS 242 (416)
T ss_dssp EEEEEEESBCTTTCBBCCHHHHHHHHHHHTCEEEEECTTTTTTSCCCHHHH---TCSEEEECSSSTTCCCTTCCCEEEEC
T ss_pred ceEEEEeccccCcccccCHHHHHHHHHHcCCEEEEEccccccCcCCChhhc---CCCEEEecCcccCCCCCCCeEEEEEC
Confidence 9999887 555 678899999999999999999999999876554322111 3899999999997 56787 999999
Q ss_pred cchhhhhc
Q 023191 272 KGVKEINK 279 (286)
Q Consensus 272 ~~~~~~~~ 279 (286)
+++.+..+
T Consensus 243 ~~~~~~l~ 250 (416)
T 1qz9_A 243 PQLCDLVP 250 (416)
T ss_dssp TTTTTTSC
T ss_pred HHHHhccC
Confidence 88765444
No 122
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=99.82 E-value=3.4e-20 Score=166.19 Aligned_cols=177 Identities=18% Similarity=0.178 Sum_probs=128.8
Q ss_pred CCcchHHHHHHHHHHHHHHHC-CCCCCCcceeEEeCCChH-HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccc
Q 023191 85 GGNEYIDMAESLCQKRALEAF-RLDPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKIS 162 (286)
Q Consensus 85 ~~~~~~~~l~~~~~~~~~~~~-g~~~~~~~~~v~~~sG~~-a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~ 162 (286)
+...+..+++ +.+++++ +++++ +|++++|++ ++.+++.++++|||+|+++.+.|.++.. .+.
T Consensus 60 ~~~~g~~~l~----~~la~~~~~~~~~----~v~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~--------~~~ 123 (375)
T 3op7_A 60 GWIEGSPAFK----KSVSQLYTGVKPE----QILQTNGATGANLLVLYSLIEPGDHVISLYPTYQQLYD--------IPK 123 (375)
T ss_dssp CCTTCCHHHH----HHHHTTSSSCCGG----GEEEESHHHHHHHHHHHHHCCTTCEEEEEESSCTHHHH--------HHH
T ss_pred CCCCChHHHH----HHHHHHhccCChh----hEEEcCChHHHHHHHHHHhcCCCCEEEEeCCCchhHHH--------HHH
Confidence 3334556666 5566665 45654 499999988 8888999999999999999966655432 344
Q ss_pred cceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccC---HHHHHHHHHhcCCEEEEecccccccc
Q 023191 163 AVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLV 237 (286)
Q Consensus 163 ~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~-~~n-~g~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~ 237 (286)
..|.+++.++++.+ +++.+|++++++++++ ++++|+++ ++| +|...+ +++|.++|++||+++|+|++|+....
T Consensus 124 ~~g~~~~~v~~~~~-~~~~~d~~~l~~~l~~-~~~~v~~~~~~nptG~~~~~~~l~~i~~la~~~~~~li~De~~~~~~~ 201 (375)
T 3op7_A 124 SLGAEVDLWQIEEE-NGWLPDLEKLRQLIRP-TTKMICINNANNPTGAVMDRTYLEELVEIASEVGAYILSDEVYRSFSE 201 (375)
T ss_dssp HTTCEEEEEEEEGG-GTTEECHHHHHHHCCT-TCCEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECCSCCCSS
T ss_pred HcCCEEEEEecccc-CCCCCCHHHHHHhhcc-CCeEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEcccccccc
Confidence 56666666664422 4567999999999987 89999997 656 677788 99999999999999999999875432
Q ss_pred ccCCCCCC--CCcceEEEeCCCCCCC--CCCceEEEEecchhhhhccC
Q 023191 238 AAGVIPSP--FEYADVVTTTTHKSLR--GPRGAMIFFRKGVKEINKQG 281 (286)
Q Consensus 238 ~~~~~~~~--~~~~D~v~~s~~K~l~--gp~gG~l~~~~~~~~~~~~~ 281 (286)
. .. ... ..+.++++.|++|+++ |.+.|++++++++.+..++.
T Consensus 202 ~-~~-~~~~~~~~~~i~~~s~sK~~~~~G~r~G~v~~~~~l~~~~~~~ 247 (375)
T 3op7_A 202 L-DV-PSIIEVYDKGIAVNSLSKTYSLPGIRIGWVAANHQVTDILRDY 247 (375)
T ss_dssp S-CC-CCHHHHCTTEEEEEESSSSSSCGGGCCEEEECCHHHHHHHTTT
T ss_pred c-CC-CchhhhcCCEEEEeEChhhcCCcccceEEEEeCHHHHHHHHHH
Confidence 2 11 110 0125588999999985 33459999988887766644
No 123
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=99.82 E-value=1.2e-19 Score=169.22 Aligned_cols=207 Identities=11% Similarity=0.062 Sum_probs=139.7
Q ss_pred CHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCC-CCCCCcceeEEeCCChH-HHHHHHHHhcCCC
Q 023191 59 SVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFR-LDPEKWGVNVQSLSGSP-SNFQVYTALLKPH 136 (286)
Q Consensus 59 ~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g-~~~~~~~~~v~~~sG~~-a~~~~l~a~~~~G 136 (286)
|..+.+++.+.+.... + .....|+...+..++++++.+++++.+| ++.+. .+|++|+|++ ++..++.+++++|
T Consensus 103 P~~~~~~~~~~l~~~~--~-~~~~~Y~~~~G~~~lr~~ia~~~~~~~gG~~~~~--~~i~~t~G~~~ai~~~~~~l~~~g 177 (498)
T 3ihj_A 103 PEDAKKRARRILQACG--G-NSLGSYSASQGVNCIREDVAAYITRRDGGVPADP--DNIYLTTGASDGISTILKILVSGG 177 (498)
T ss_dssp CHHHHHHHHHHHHHC-------------CCSCHHHHHHHHHHHHHHTTTCCCCG--GGEEEESSHHHHHHHHHHHHCCCC
T ss_pred CHHHHHHHHHHHHhcc--C-CCCCCCCCCCCHHHHHHHHHHHHHHhcCCCCCCc--ccEEEcCCHHHHHHHHHHHHcCCC
Confidence 5556666666665411 0 0112355667788999999999998885 53222 3699999999 8887889999987
Q ss_pred C----eEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhc----CCcEEEEc-CCC-C
Q 023191 137 D----RIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF----RPKLIVAG-ASA-Y 206 (286)
Q Consensus 137 d----~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~----~tk~v~i~-~~n-~ 206 (286)
| .|+++.|.|+.+ ...+...|..++.++++-+ ++|.+|+++|++++++. ++|+|+++ |+| +
T Consensus 178 d~~~d~Vlv~~p~y~~~--------~~~~~~~g~~~v~~~~~~~-~~~~~d~~~le~~l~~~~~~~~~k~i~l~np~NPT 248 (498)
T 3ihj_A 178 GKSRTGVMIPIPQYPLY--------SAVISELDAIQVNYYLDEE-NCWALNVNELRRAVQEAKDHCDPKVLCIINPGNPT 248 (498)
T ss_dssp GGGSEEEEEEESCCTHH--------HHHHHHTTCEEEEEECBGG-GTTBCCHHHHHHHHHHHTTTSEEEEEEEESSCTTT
T ss_pred CCCCCEEEEeCCCchhH--------HHHHHHcCCEEEEeecccc-ccCCCCHHHHHHHHHhhhccCCCeEEEEECCCCCC
Confidence 6 999999555444 3355567766655654322 36799999999999874 48888886 666 6
Q ss_pred CCccC---HHHHHHHHHhcCCEEEEeccccccccccCCCCCCCCc------------c-eEEEeCCCCCC---CCCCceE
Q 023191 207 ARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEY------------A-DVVTTTTHKSL---RGPRGAM 267 (286)
Q Consensus 207 g~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~------------~-D~v~~s~~K~l---~gp~gG~ 267 (286)
|.+.+ +++|+++|++|++++|+|++|.......+.....+.. . -+++.|++|+| +|.++|+
T Consensus 249 G~v~s~~~l~~i~~la~~~~~~li~De~y~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~S~SK~~~G~~G~R~G~ 328 (498)
T 3ihj_A 249 GQVQSRKCIEDVIHFAWEEKLFLLADEVYQDNVYSPDCRFHSFKKVLYEMGPEYSSNVELASFHSTSKGYMGECGYRGGY 328 (498)
T ss_dssp CCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTCHHHHTTCCEEEEEESSSSTTCCSSSCCEE
T ss_pred CCcCCHHHHHHHHHHHHHcCcEEEEEcCccccccCCCCCcCCHHHHHHHhcccccCceeEEEEeccccccccCcccceEE
Confidence 76654 6789999999999999999976554432211111110 1 26688999998 3777799
Q ss_pred EEE---ecchhhhhc
Q 023191 268 IFF---RKGVKEINK 279 (286)
Q Consensus 268 l~~---~~~~~~~~~ 279 (286)
+.+ +.++.+.++
T Consensus 329 ~~~~~~~~~l~~~l~ 343 (498)
T 3ihj_A 329 MEVINLHPEIKGQLV 343 (498)
T ss_dssp EEEESCCHHHHHHHH
T ss_pred EEEecCCHHHHHHHH
Confidence 984 556665554
No 124
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=99.82 E-value=6.4e-20 Score=167.51 Aligned_cols=195 Identities=13% Similarity=0.157 Sum_probs=141.5
Q ss_pred eecCCCCC--CCHHHHHHhccccccCCCCCCCCCcccCC-cchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-HH
Q 023191 50 ELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGG-NEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SN 125 (286)
Q Consensus 50 ~L~~~e~~--~~~~v~~a~~~~l~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~ 125 (286)
+|..+++. +|+.+++++.+.+...+ |+. ..+..+++ +.+++++|.+ +|++++|++ ++
T Consensus 20 ~l~~~~p~~~~p~~~~~a~~~~~~~~~---------y~~~~~~~~~l~----~~la~~~~~~------~v~~~~ggt~al 80 (424)
T 2po3_A 20 PLLVGRPNRIDRARLYERLDRALDSQW---------LSNGGPLVREFE----ERVAGLAGVR------HAVATCNATAGL 80 (424)
T ss_dssp CEETTCCCCCCHHHHHHHHHHHHHHTC---------CSSSCHHHHHHH----HHHHHHHTSS------EEEEESCHHHHH
T ss_pred cccccCCCCCChHHHHHHHHHHHhcCC---------cccCCHHHHHHH----HHHHHHhCCC------eEEEeCCHHHHH
Confidence 56667764 46689999988775421 232 34555666 6666677764 388889988 88
Q ss_pred HHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCC
Q 023191 126 FQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASA 205 (286)
Q Consensus 126 ~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~~~n 205 (286)
.+++.++. +||+|+++++.|.++.. .+...|.+++.++ ++++++.+|+++|++.+++ ++++|+++. .
T Consensus 81 ~~~l~~l~-~gd~Vlv~~~~~~~~~~--------~~~~~G~~~~~v~--~~~~~~~~d~~~l~~~i~~-~~~~v~~~~-~ 147 (424)
T 2po3_A 81 QLLAHAAG-LTGEVIMPSMTFAATPH--------ALRWIGLTPVFAD--IDPDTGNLDPDQVAAAVTP-RTSAVVGVH-L 147 (424)
T ss_dssp HHHHHHHT-CCSEEEEESSSCTHHHH--------HHHHTTCEEEEEC--BCTTTSSBCHHHHGGGCCT-TEEEEEEEC-G
T ss_pred HHHHHHcC-CCCEEEECCCccHHHHH--------HHHHcCCEEEEEe--cCCCcCCcCHHHHHHhhCc-CCcEEEEEC-C
Confidence 87777774 79999999977766543 3345676565554 5544688999999999987 899998853 3
Q ss_pred CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCCcceEEEeCCC--CCCCCCCceEEEEe-cchhhhh
Q 023191 206 YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTH--KSLRGPRGAMIFFR-KGVKEIN 278 (286)
Q Consensus 206 ~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~--K~l~gp~gG~l~~~-~~~~~~~ 278 (286)
+|...++++|.++|+++|+++|+|++|+.|....+.... ...|++++|+| |+++|+++|+++++ +++.+..
T Consensus 148 tG~~~~l~~i~~la~~~~~~li~Dea~~~g~~~~~~~~~--~~~di~~~S~sk~K~l~~~~~G~~v~~~~~l~~~l 221 (424)
T 2po3_A 148 WGRPCAADQLRKVADEHGLRLYFDAAHALGCAVDGRPAG--SLGDAEVFSFHATKAVNAFEGGAVVTDDADLAARI 221 (424)
T ss_dssp GGCCCCHHHHHHHHHHTTCEEEEECTTCTTCEETTEETT--SSSSEEEEECCTTSSSCCSSCEEEEESCHHHHHHH
T ss_pred CCCcCCHHHHHHHHHHcCCEEEEECccccCCeECCeecc--cccCEEEEeCCCCCCccCCCCeEEEeCCHHHHHHH
Confidence 677889999999999999999999999877653221111 12588888887 99988888999998 4655443
No 125
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=99.82 E-value=6.6e-21 Score=170.75 Aligned_cols=195 Identities=17% Similarity=0.172 Sum_probs=138.0
Q ss_pred ceecCCCCCCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-HHHH
Q 023191 49 LELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQ 127 (286)
Q Consensus 49 i~L~~~e~~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~ 127 (286)
+++..+.++.++++++++.+.+...+ |.......+++ +.+++++|.+. +++++|++ ++.+
T Consensus 5 ~~~~~~~~~~~~~v~~a~~~~~~~~~---------~~~~~~~~~l~----~~la~~~~~~~------~~~~~sGt~al~~ 65 (367)
T 3nyt_A 5 IDLKNQQARIKDKIDAGIQRVLRHGQ---------YILGPEVTELE----DRLADFVGAKY------CISCANGTDALQI 65 (367)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHHHHCC---------CSSCHHHHHHH----HHHHHHHTCSE------EEEESCHHHHHHH
T ss_pred ccccccccccCHHHHHHHHHHHhcCC---------ccCChHHHHHH----HHHHHHhCCCc------EEEeCCHHHHHHH
Confidence 44444444567888888888776522 12234455555 77777788763 45545555 8887
Q ss_pred HHHHh-cCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCC-
Q 023191 128 VYTAL-LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASA- 205 (286)
Q Consensus 128 ~l~a~-~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~~~n- 205 (286)
++.++ +++||+|+++.+.|.++.. .+...|.+++.+ +.+++++.+|++++++++++ ++++|+ +.|
T Consensus 66 al~~~~~~~gd~Vi~~~~~~~~~~~--------~~~~~G~~~~~~--~~~~~~~~~d~~~l~~~i~~-~~~~v~--~~~~ 132 (367)
T 3nyt_A 66 VQMALGVGPGDEVITPGFTYVATAE--------TVALLGAKPVYV--DIDPRTYNLDPQLLEAAITP-RTKAII--PVSL 132 (367)
T ss_dssp HHHHTTCCTTCEEEEESSSCTHHHH--------HHHHTTCEEEEE--CBCTTTCSBCGGGTGGGCCT-TEEEEC--CBCG
T ss_pred HHHHhCCCCcCEEEECCCccHHHHH--------HHHHcCCEEEEE--ecCCccCCcCHHHHHHhcCc-CCcEEE--eeCC
Confidence 88998 8999999999977766543 334556555555 45545689999999999977 888887 344
Q ss_pred CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCCcceEEEeCC--CCCCCC-CCceEEEEec-chhhh
Q 023191 206 YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTT--HKSLRG-PRGAMIFFRK-GVKEI 277 (286)
Q Consensus 206 ~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~--~K~l~g-p~gG~l~~~~-~~~~~ 277 (286)
+|...++++|.++|++||+++|+|++|+.|....+.....+ .|++++|+ ||++++ +.||++++++ ++.+.
T Consensus 133 ~G~~~~~~~i~~la~~~~~~li~D~a~~~g~~~~~~~~~~~--~di~~~Sf~~~K~l~~~g~gg~~~~~~~~l~~~ 206 (367)
T 3nyt_A 133 YGQCADFDAINAIASKYGIPVIEDAAQSFGASYKGKRSCNL--STVACTSFFPSAPLGCYGDGGAIFTNDDELATA 206 (367)
T ss_dssp GGCCCCHHHHHHHHHHTTCCBEEECTTTTTCEETTEETTSS--SSEEEEECCTTSSSCCSSCCEEEEESCHHHHHH
T ss_pred ccChhhHHHHHHHHHHcCCEEEEECccccCCeECCeeccCC--CCEEEEECCCCCcCCCcCceeEEEeCCHHHHHH
Confidence 68889999999999999999999999998766432211111 38998885 899977 4578888865 45443
No 126
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=99.82 E-value=2.2e-20 Score=166.82 Aligned_cols=206 Identities=9% Similarity=0.046 Sum_probs=141.1
Q ss_pred cCceecCCCCCCCHHHHHHhccccccCCCCCCC--CCcccCCcchHHHHHHHHHHHHHHHCCCCCCCccee-EEeCCChH
Q 023191 47 KGLELIPSENFTSVSVMQAVGSVMTNKYSEGYP--GARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVN-VQSLSGSP 123 (286)
Q Consensus 47 ~~i~L~~~e~~~~~~v~~a~~~~l~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~-v~~~sG~~ 123 (286)
..+++.++..++|+.+++++.+.+.+....+.. ...++ .....++.+++++++++++|++.+. + +++|+|++
T Consensus 4 ~~~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~la~~~g~~~~~---~~i~~t~g~t 78 (362)
T 2c0r_A 4 RAYNFNAGPAALPLEVLERAQAEFVDYQHTGMSIMEMSHR--GAVYEAVHNEAQARLLALLGNPTGY---KVLFIQGGAS 78 (362)
T ss_dssp CCEECCSSSCCCCHHHHHHHHHTSSSSTTSSSCGGGSCTT--SHHHHHHHHHHHHHHHHHTTCCSSE---EEEEESSHHH
T ss_pred ceeeccCCCCCCCHHHHHHHHHHHhhhhhcCccccccCCC--cHHHHHHHHHHHHHHHHHhCCCCCc---EEEEECCCch
Confidence 356788888889999999999888652211111 00111 2334567788999999999996531 3 57788888
Q ss_pred -HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCC-CCCCCCHHHHHHHhhhcCCcEEEE
Q 023191 124 -SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNE-STGYIDYDQLEKSATLFRPKLIVA 201 (286)
Q Consensus 124 -a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~-~~~~~d~e~l~~~i~~~~tk~v~i 201 (286)
++.+++.++++|||+|+++++.+.++. . ...+...| +++.++++.+. .+..+|.++++ +++ +||+|++
T Consensus 79 ~a~~~~~~~l~~~gd~vl~~~~~~~~~~--~----~~~~~~~g-~~~~v~~~~~~~~~~~~~~~~~~--i~~-~t~~v~~ 148 (362)
T 2c0r_A 79 TQFAMIPMNFLKEGQTANYVMTGSWASK--A----LKEAKLIG-DTHVAASSEASNYMTLPKLQEIQ--LQD-NAAYLHL 148 (362)
T ss_dssp HHHHHHHHHHCCTTCEEEEEECSHHHHH--H----HHHHHHHS-CEEEEEECGGGTTCSCCCGGGCC--CCT-TEEEEEE
T ss_pred HHHHHHHHhcCCCCCeEEEEecCcHhHH--H----HHHHHHhC-CeEEEecccccccccCCCHHHcc--cCC-CcCEEEE
Confidence 888899999999999998764322210 0 11234456 67777654211 22346776654 565 8999988
Q ss_pred c-CCC-CCCc-cCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCCcceEEEeCCCCCCCCCCc-eEEEEecchhhh
Q 023191 202 G-ASA-YARL-YDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEI 277 (286)
Q Consensus 202 ~-~~n-~g~~-~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~g-G~l~~~~~~~~~ 277 (286)
+ ++| +|.. .++++| +|+++++|++|+.|....+ +...|++++|+||++ ||.| |++++++++.+.
T Consensus 149 ~~~~n~tG~~~~~l~~i------~~~~vivD~a~~~~~~~~~-----~~~~d~~~~s~~K~~-g~~G~G~l~~~~~~~~~ 216 (362)
T 2c0r_A 149 TSNETIEGAQFKAFPDT------GSVPLIGDMSSDILSRPFD-----LNQFGLVYAGAQKNL-GPSGVTVVIVREDLVAE 216 (362)
T ss_dssp ESEETTTTEECSSCCCC------TTSCEEEECTTTTTSSCCC-----GGGCSEEEEETTTTT-CCSSCEEEEEEGGGSSS
T ss_pred eCCcCccceeccccccc------CCCEEEEEChhhccCCccc-----hhHCcEEEEeccccc-cCcCcEEEEEcHHHHhh
Confidence 7 555 6653 577776 8999999999988765432 222589999999999 5888 999999987655
Q ss_pred hc
Q 023191 278 NK 279 (286)
Q Consensus 278 ~~ 279 (286)
++
T Consensus 217 l~ 218 (362)
T 2c0r_A 217 SP 218 (362)
T ss_dssp CC
T ss_pred cc
Confidence 54
No 127
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=99.82 E-value=2.4e-20 Score=167.05 Aligned_cols=192 Identities=11% Similarity=0.070 Sum_probs=140.1
Q ss_pred cCceecCCCCCCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChHHHH
Q 023191 47 KGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNF 126 (286)
Q Consensus 47 ~~i~L~~~e~~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~a~~ 126 (286)
..++|..+.+..++ +++++.+.+.... |.......+++ +.++++++.+. .+++++|+.++.
T Consensus 7 ~~~~l~~~~~~~~~-~~~~~~~~~~~~~---------~~~~~~~~~l~----~~la~~~~~~~-----~~~~~~gt~a~~ 67 (374)
T 3uwc_A 7 PYSYLERQFADIEP-YLNDLREFIKTAD---------FTLGAELEKFE----KRFAALHNAPH-----AIGVGTGTDALA 67 (374)
T ss_dssp CSCCHHHHTSSCHH-HHHHHHHHHHHTC---------CSSCHHHHHHH----HHHHHHTTCSE-----EEEESCHHHHHH
T ss_pred eeeccccCCCCchH-HHHHHHHHHHcCC---------cccChhHHHHH----HHHHHHhCCCc-----EEEeCCHHHHHH
Confidence 35677777777777 8888888775421 22334455555 77888888763 355555544888
Q ss_pred HHHHHh-cCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCC
Q 023191 127 QVYTAL-LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASA 205 (286)
Q Consensus 127 ~~l~a~-~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~~~n 205 (286)
+++.++ +++||+|+++.+.|.++.. .+...|.+++.++ .+ +++.+|++++++.+++ ++++|+ ++|
T Consensus 68 ~~~~~~~~~~gd~v~~~~~~~~~~~~--------~~~~~g~~~~~~~--~~-~~~~~d~~~l~~~~~~-~~~~v~--~~n 133 (374)
T 3uwc_A 68 MSFKMLNIGAGDEVITCANTFIASVG--------AIVQAGATPVLVD--SE-NGYVIDPEKIEAAITD-KTKAIM--PVH 133 (374)
T ss_dssp HHHHHTTCCTTCEEEEESSSCHHHHH--------HHHHTTCEEEEEC--BC-TTSSBCGGGTGGGCCT-TEEEEC--CBC
T ss_pred HHHHHcCCCCCCEEEECCCccHHHHH--------HHHHcCCEEEEEe--cC-CCCCcCHHHHHHhCCC-CceEEE--EeC
Confidence 799999 9999999999977766543 3445666665555 44 5688999999999987 888887 455
Q ss_pred -CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCCcceEEEeCCC--CCCCC-CCceEEEEecc
Q 023191 206 -YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTH--KSLRG-PRGAMIFFRKG 273 (286)
Q Consensus 206 -~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~--K~l~g-p~gG~l~~~~~ 273 (286)
+|...++++|.++|++||+++|+|++|+.|......... ...|++++|+| |++++ +.||+++++++
T Consensus 134 ~~G~~~~~~~i~~~~~~~~~~li~D~~~~~g~~~~~~~~~--~~~d~~~~s~~~~K~l~~~g~~g~~~~~~~ 203 (374)
T 3uwc_A 134 YTGNIADMPALAKIAKKHNLHIVEDACQTILGRINDKFVG--SWGQFACFSLHPLKNLNVWSDAGVIITHSD 203 (374)
T ss_dssp GGGCCCCHHHHHHHHHHTTCEEEEECTTCTTCEETTEETT--SSSSEEEEECSSSSSSCCSSCCEEEEESCH
T ss_pred CcCCcCCHHHHHHHHHHcCCEEEEeCCCccCceeCCeecc--ccccEEEEeCCCCCcCCccceeEEEEeCCH
Confidence 778889999999999999999999999887653221111 12699999987 99987 45688888763
No 128
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=99.82 E-value=1.1e-19 Score=165.17 Aligned_cols=213 Identities=12% Similarity=0.062 Sum_probs=144.0
Q ss_pred cCceecCCCC-------CCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeC
Q 023191 47 KGLELIPSEN-------FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSL 119 (286)
Q Consensus 47 ~~i~L~~~e~-------~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~ 119 (286)
+.++|..++. ++++.+.+++.+...... .+ |+...+..++++++.+++.+..+.+.. .+|++|
T Consensus 38 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~-~~------Y~~~~g~~~lr~~la~~~~~~~~~~~~---~~i~~t 107 (413)
T 3t18_A 38 AVINAALGTLLDDKGKIIALPSVYDRLDEMDRSHI-AS------YAPIEGEKDYRKIVIDTLFGPYKPEGY---ISAIAT 107 (413)
T ss_dssp GCEECCSCCCBCTTSCBCCCHHHHHHHHHSCHHHH-HS------CCCTTCCHHHHHHHHHHHHGGGCCSSE---EEEEEE
T ss_pred ceEeccccCccCCCCCcCChHHHHHHHHhcCcccc-cC------cCCCCCCHHHHHHHHHHHhcccCcccc---CcEEEc
Confidence 6799988763 368888888866432110 11 233456678898888888776654321 369999
Q ss_pred CChH-HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhc---C
Q 023191 120 SGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF---R 195 (286)
Q Consensus 120 sG~~-a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~---~ 195 (286)
+|++ ++..++.++++|||+|++++|.|.+ +...+...|.+++.++ .+.+++.+|+++|++.+++. +
T Consensus 108 ~g~~~al~~~~~~~~~~gd~Vl~~~p~~~~--------~~~~~~~~g~~~~~~~--~~~~~~~~d~~~l~~~l~~~~~~~ 177 (413)
T 3t18_A 108 PGGTGAIRSAIFSYLDEGDPLICHDYYWAP--------YRKICEEFGRNFKTFE--FFTDDFAFNIDVYKEAIDEGIRDS 177 (413)
T ss_dssp SHHHHHHHHHHHHHCCSSCEEEEESSCCTH--------HHHHHHHHTCEEEEEC--CBCTTSSBCHHHHHHHHHHHHHHC
T ss_pred CccHHHHHHHHHHhcCCCCEEEECCCCccc--------HHHHHHHhCCeEEEee--ccCCCCCcCHHHHHHHHHHHhhcC
Confidence 9999 8888999999999999999955544 3335556776666665 43245789999999998753 6
Q ss_pred Cc-EEEEc-C-CC-CCCccCHH---HHHHHHH------hcCCEEEEeccccccccccCCCCCCC----Cc--c---eEEE
Q 023191 196 PK-LIVAG-A-SA-YARLYDYE---RIRKVCN------KQKAIMLADMAHISGLVAAGVIPSPF----EY--A---DVVT 253 (286)
Q Consensus 196 tk-~v~i~-~-~n-~g~~~~l~---~I~~ia~------~~~~~vivD~a~~~g~~~~~~~~~~~----~~--~---D~v~ 253 (286)
++ +++++ | +| +|...+.+ +|+++|+ +||+++|+|++|. +....+.....+ .. . .+++
T Consensus 178 ~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 256 (413)
T 3t18_A 178 DRIASLINSPGNNPTGYSLSDEEWDEVITFLKEKAEDKDKKITLIVDVAYL-EFAGDGDQQRKFFEKFSNLPRNLFVVVA 256 (413)
T ss_dssp SEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTTSTTCEEEEEEECTTG-GGSSSSSTTTGGGGGGTTCCTTEEEEEE
T ss_pred CCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHhhccCCcEEEEEecccc-cccCChhhHHHHHHHHhhcCCCeeEEEE
Confidence 77 67777 6 66 77777755 5556666 8999999999964 222222111110 01 1 2778
Q ss_pred eCCCCCCCCC--CceEEEE---ecchhhhhcc
Q 023191 254 TTTHKSLRGP--RGAMIFF---RKGVKEINKQ 280 (286)
Q Consensus 254 ~s~~K~l~gp--~gG~l~~---~~~~~~~~~~ 280 (286)
.|++|+|+.| +.|++++ ++++.+..++
T Consensus 257 ~S~sK~~~~~G~riG~~~~~~~~~~~~~~~~~ 288 (413)
T 3t18_A 257 FSMSKSHTAYGLRSGAAVGISSSKEIIEEFEA 288 (413)
T ss_dssp EEHHHHTTCGGGCCEEEEEEESCHHHHHHHHH
T ss_pred EecCccCCCcCcCcEEEEEecCCHHHHHHHHH
Confidence 8999988533 4499998 7777665553
No 129
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=99.82 E-value=3.7e-20 Score=167.79 Aligned_cols=199 Identities=17% Similarity=0.108 Sum_probs=142.8
Q ss_pred cCceecCCCCCCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChHHHH
Q 023191 47 KGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNF 126 (286)
Q Consensus 47 ~~i~L~~~e~~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~a~~ 126 (286)
..++|..+++..++.+++++.+.+... .| .......+++ +.+++++|.+. .+++++|+.++.
T Consensus 31 ~~id~~~~~~~~~~~v~~a~~~~~~~~---~y------~~~~~~~~l~----~~la~~~~~~~-----~v~~~~Gt~a~~ 92 (399)
T 2oga_A 31 PFLDLKAAYEELRAETDAAIARVLDSG---RY------LLGPELEGFE----AEFAAYCETDH-----AVGVNSGMDALQ 92 (399)
T ss_dssp CSCCHHHHHHHTHHHHHHHHHHHHHHT---CC------SSSHHHHHHH----HHHHHHTTSSE-----EEEESCHHHHHH
T ss_pred cccccCcCCCCCCHHHHHHHHHHHhcC---CC------CCchhHHHHH----HHHHHHHCCCe-----EEEecCHHHHHH
Confidence 567887777766789999998877541 11 2223444444 77788888762 466666655888
Q ss_pred HHHHHh-cCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCC
Q 023191 127 QVYTAL-LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASA 205 (286)
Q Consensus 127 ~~l~a~-~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~~~n 205 (286)
.++.++ +++||+|+++.+.|.++.. .+...|.+++.++ .+++++.+|++++++.+++ ++++|++++ .
T Consensus 93 ~~l~~~~~~~gd~vl~~~~~~~~~~~--------~~~~~g~~~~~~~--~~~~~~~~d~~~l~~~i~~-~~~~v~~~n-~ 160 (399)
T 2oga_A 93 LALRGLGIGPGDEVIVPSHTYIASWL--------AVSATGATPVPVE--PHEDHPTLDPLLVEKAITP-RTRALLPVH-L 160 (399)
T ss_dssp HHHHHTTCCTTCEEEEESSSCTHHHH--------HHHHTTCEEEEEC--BCSSSSSBCHHHHHHHCCT-TEEEECCBC-G
T ss_pred HHHHHhCCCCcCEEEECCCccHHHHH--------HHHHCCCEEEEEe--cCCCCCCcCHHHHHHhcCC-CCeEEEEeC-C
Confidence 789999 9999999999977666433 3345566565555 4434678999999999987 888887531 2
Q ss_pred CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCCcceEEEeCCC--CCCCCC-CceEEEEe-cchhhh
Q 023191 206 YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTH--KSLRGP-RGAMIFFR-KGVKEI 277 (286)
Q Consensus 206 ~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~--K~l~gp-~gG~l~~~-~~~~~~ 277 (286)
+|...++++|.++|+++|+++|+|++|+.|....+. ... ...|++++|+| |+|+++ ++|+++++ +++.+.
T Consensus 161 tG~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~-~~~-~~~di~~~S~~~sK~~~~~G~~g~~~~~~~~~~~~ 234 (399)
T 2oga_A 161 YGHPADMDALRELADRHGLHIVEDAAQAHGARYRGR-RIG-AGSSVAAFSFYPGKNLGCFGDGGAVVTGDPELAER 234 (399)
T ss_dssp GGCCCCHHHHHHHHHHHTCEECEECTTCTTCEETTE-ETT-CTTCEEEEECCTTSSSCCSSCCEEEEESCHHHHHH
T ss_pred cCCccCHHHHHHHHHHcCCEEEEECcccccCccCCe-ecc-cccCEEEEeCCCCccCCcCCceEEEEeCCHHHHHH
Confidence 788889999999999999999999999877543211 111 12699999995 999764 67888886 455443
No 130
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=99.81 E-value=3.2e-19 Score=161.00 Aligned_cols=195 Identities=18% Similarity=0.192 Sum_probs=138.6
Q ss_pred ceecCCCCCCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChHHHHHH
Q 023191 49 LELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQV 128 (286)
Q Consensus 49 i~L~~~e~~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~a~~~~ 128 (286)
+++..+.+.+++++++++.+.+.+.+ |.......+++ +.+++++|.+. .|++++|+.++..+
T Consensus 4 ~~~~~~~~~~~~~~~~a~~~~~~~~~---------~~~~~~~~~l~----~~la~~~~~~~-----~i~~~sGt~a~~~a 65 (390)
T 3b8x_A 4 INYPLASSTWDDLEYKAIQSVLDSKM---------FTMGEYVKQYE----TQFAKTFGSKY-----AVMVSSGSTANLLM 65 (390)
T ss_dssp -CBCSCCCCCCHHHHHHHHHHHHHTC---------CSSCHHHHHHH----HHHHHHHTCSE-----EEEESCHHHHHHHH
T ss_pred eeccCCCCCCCHHHHHHHHHHHHcCC---------CCCChHHHHHH----HHHHHHHCCCc-----EEEECCHHHHHHHH
Confidence 55555777789999999988886521 12234455555 67777778762 47777777788778
Q ss_pred HHHh-------cCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEE
Q 023191 129 YTAL-------LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA 201 (286)
Q Consensus 129 l~a~-------~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i 201 (286)
+.++ +++||+|+++.+.|.++..+ +...|.+++.++ ++++++.+|++++++++++ +|++|++
T Consensus 66 l~~~~~~~~~~~~~g~~Vi~~~~~~~~~~~~--------~~~~g~~~~~~~--~~~~~~~~d~~~l~~~i~~-~~~~v~~ 134 (390)
T 3b8x_A 66 IAALFFTKKPRLKKGDEIIVPAVSWSTTYYP--------LQQYGLRVKFVD--IDINTLNIDIESLKEAVTD-STKAILT 134 (390)
T ss_dssp HHHTTSSSSCSCCTTCEEEEESSSCHHHHHH--------HHHTTCEEEEEC--BCTTTCSBCHHHHHHHCCT-TEEEEEE
T ss_pred HHHHHhhhhcCCCCcCEEEECCCCcHHHHHH--------HHHcCCEEEEEe--cCccccCcCHHHHHHHhCc-CCeEEEE
Confidence 8888 88999999999877776542 334565555554 5544589999999999987 8999988
Q ss_pred cCCCCCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCCcceEEEeC--CCCCCCCCCceEEEEec-chh
Q 023191 202 GASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTT--THKSLRGPRGAMIFFRK-GVK 275 (286)
Q Consensus 202 ~~~n~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s--~~K~l~gp~gG~l~~~~-~~~ 275 (286)
+. .+|...++++|.++|++||+++|+|++|+.|... +....+. ..|+.++| .+|.++++.||++++++ ++.
T Consensus 135 ~~-~~g~~~~~~~i~~l~~~~~~~li~D~a~~~g~~~-~~~~~g~-~~~~~~~s~~~~k~~~~g~gG~~~~~~~~l~ 208 (390)
T 3b8x_A 135 VN-LLGNPNNFDEINKIIGGRDIILLEDNCESMGATF-NNKCAGT-FGLMGTFSSFYSNHIATMEGGCIVTDDEEIY 208 (390)
T ss_dssp EC-GGGCCCCHHHHHHHHTTSCCEEEEECTTCTTCEE-TTEETTS-SSSEEEEECCTTSSSCSSSCEEEEESCHHHH
T ss_pred EC-CccChhhHHHHHHHHHHcCCEEEEECcCcccCEE-CCccccc-ccceEEEEccCCCCCccCCceEEEeCCHHHH
Confidence 52 2456689999999999999999999999988765 2222221 13554433 24447677789999987 443
No 131
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=99.81 E-value=7.9e-20 Score=166.59 Aligned_cols=230 Identities=16% Similarity=0.057 Sum_probs=156.4
Q ss_pred ccccccChHHHHHHHHHHHHHHcCceecCCCCC-----CCHHHHHHhc--cccccCCCCCCCCCccc-CCcchHHHHHHH
Q 023191 25 APLEVVDPEIADIIEHEKARQWKGLELIPSENF-----TSVSVMQAVG--SVMTNKYSEGYPGARYY-GGNEYIDMAESL 96 (286)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~i~L~~~e~~-----~~~~v~~a~~--~~l~~~~~~~~~~~~~~-~~~~~~~~l~~~ 96 (286)
..+..+.++.++.+.+.. .....++|..+.+. +++.+++++. +.+.+.. ....| +...+..+++
T Consensus 5 ~~~~~~~~~~~~~~~~~~-~~~~~i~l~~g~p~~~~~~~~~~v~~a~~~~~~~~~~~-----~~~~Yp~~~~g~~~lr-- 76 (423)
T 3ez1_A 5 EASRPALDLARQAYEAFK-ARGLNLNMQRGQPADADFDLSNGLLTVLGAEDVRMDGL-----DLRNYPGGVAGLPSAR-- 76 (423)
T ss_dssp -CCHHHHHHHHHHHHHHH-HHTCCEESCCCCCCHHHHHTTGGGGGSCCGGGCEETTE-----ETTSSCSCTTCCHHHH--
T ss_pred HHHHHHHHHHHHHHHHhh-cCCceEecCCCCCChHhCCCcHHHHHHHhhhHHhhcch-----hhhCCCCCCCChHHHH--
Confidence 355667788888887753 44578999988775 4567888875 5544210 01123 4445556666
Q ss_pred HHHHHHHHCCCCCCCcceeEEeCCChH-HHH--HHHHHhcC--C---------CCeEEeccCCCCcccCccccccccccc
Q 023191 97 CQKRALEAFRLDPEKWGVNVQSLSGSP-SNF--QVYTALLK--P---------HDRIMALDLPHGGHLSHGYQTDTKKIS 162 (286)
Q Consensus 97 ~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~--~~l~a~~~--~---------Gd~Vl~~~~~~~~~~~~~~~~~~~~~~ 162 (286)
+.++++++++++ +|++|+|++ ++. +++.++++ | ||+|+++++.|.++ ...+.
T Consensus 77 --~~ia~~~~~~~~----~i~~t~G~~~al~~~~~~~~l~~~~~g~~~~~~~~gd~Vlv~~p~y~~~--------~~~~~ 142 (423)
T 3ez1_A 77 --ALFAGYLDVKAE----NVLVWNNSSLELQGLVLTFALLHGVRGSTGPWLSQTPKMIVTVPGYDRH--------FLLLQ 142 (423)
T ss_dssp --HHHHHHTTSCGG----GEEECSSCHHHHHHHHHHHHHHTCCTTCSSCGGGGCCEEEEEESCCHHH--------HHHHH
T ss_pred --HHHHHHhCCChh----hEEEeCCcHHHHHHHHHHHHHhccCCCccccccCCCCEEEEcCCCcHHH--------HHHHH
Confidence 667777788775 599999999 775 68888888 8 59999999555443 33455
Q ss_pred cceeeeEEEecccCCCCCCCCHHHHHHHhh-hcCCcEEEEc--CCC-CCCccCHH---HHHHHH-HhcCCEEEEeccccc
Q 023191 163 AVSIFFETMPYRLNESTGYIDYDQLEKSAT-LFRPKLIVAG--ASA-YARLYDYE---RIRKVC-NKQKAIMLADMAHIS 234 (286)
Q Consensus 163 ~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~-~~~tk~v~i~--~~n-~g~~~~l~---~I~~ia-~~~~~~vivD~a~~~ 234 (286)
..|.+++.+++ + ++ .+|+++|+++++ ..++++|++. ++| +|...+.+ +|+++| ++||+++|+|++|..
T Consensus 143 ~~g~~~~~v~~--~-~~-g~d~~~l~~~l~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~~li~De~y~~ 218 (423)
T 3ez1_A 143 TLGFELLTVDM--Q-SD-GPDVDAVERLAGTDPSVKGILFVPTYSNPGGETISLEKARRLAGLQAAAPDFTIFADDAYRV 218 (423)
T ss_dssp HHTCEEEEEEE--E-TT-EECHHHHHHHHHSCTTEEEEEECSSSCTTTCCCCCHHHHHHHHTCCCSSTTCEEEEECTTSS
T ss_pred HcCCEEEeccC--C-CC-CCCHHHHHHHHhhCCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHhccCCEEEEECCcch
Confidence 67766666654 4 22 499999999995 2378998764 466 67777765 888888 899999999999874
Q ss_pred ccccc-CCCCC----------CCCcceEEEeCCCCC-CCCCCceEEEEecchhhhhcc
Q 023191 235 GLVAA-GVIPS----------PFEYADVVTTTTHKS-LRGPRGAMIFFRKGVKEINKQ 280 (286)
Q Consensus 235 g~~~~-~~~~~----------~~~~~D~v~~s~~K~-l~gp~gG~l~~~~~~~~~~~~ 280 (286)
..+.. +.... ...+.++++.|++|+ ++|.+.|+++.++++.+..++
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~G~r~G~~~~~~~~~~~~~~ 276 (423)
T 3ez1_A 219 HHLVEEDRAEPVNFVVLARDAGYPDRAFVFASTSKITFAGAGLGFVASSEDNIRWLSK 276 (423)
T ss_dssp CBCCSSSCCCCCCHHHHHHHHTCTTSEEEEEESTTTSCSSSSCEEEEECHHHHHHHHH
T ss_pred hhcCCCCCCCCcchhhhhhccCCCCeEEEEeCchhhccCCcceEEEEeCHHHHHHHHH
Confidence 33322 11110 011366889999995 455566999999887766553
No 132
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=99.81 E-value=1.3e-19 Score=165.77 Aligned_cols=230 Identities=11% Similarity=0.049 Sum_probs=149.0
Q ss_pred ccccccccCh-HHHHHHHHHHHHH------HcCceecCCCC--CCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHH
Q 023191 23 LNAPLEVVDP-EIADIIEHEKARQ------WKGLELIPSEN--FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMA 93 (286)
Q Consensus 23 ~~~~~~~~~~-~~~~~~~~~~~~~------~~~i~L~~~e~--~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l 93 (286)
+++.+..+++ +.+..+.+..... .+.|+|..+++ ++++.+++++.+.+..... + .+...|+...+..++
T Consensus 26 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~-~-~~~~~y~~~~g~~~l 103 (432)
T 3ei9_A 26 RNSNMSKLQAGYLFPEIARRRSAHLLKYPDAQVISLGIGDTTEPIPEVITSAMAKKAHELST-I-EGYSGYGAEQGAKPL 103 (432)
T ss_dssp CCHHHHHCCSSCHHHHHHHHHHHHHHHCTTCCCEECSSCCCCSCCCHHHHHHHHHHHHHTTS-T-TTCCCCCCTTCCHHH
T ss_pred cChHHHhCCCCccHHHHHHHHHhhhhcCCCCCeEEccCCCCCCCCCHHHHHHHHHHHhcccc-c-CCccCCCCCCCCHHH
Confidence 3444555555 3555443322211 15689988877 4689999999888764211 0 111234545667889
Q ss_pred HHHHHHHHHHHCCCCCCCcceeEEeCCChH-HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccce-------
Q 023191 94 ESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVS------- 165 (286)
Q Consensus 94 ~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g------- 165 (286)
++++.+++.+.++++++ +|++|+|++ ++. ++.++++|||.|+++++.|.++.... ...|
T Consensus 104 ~~~ia~~~~~~~~~~~~----~i~~t~G~~~al~-~l~~l~~~gd~Vl~~~p~y~~~~~~~--------~~~g~~~~~~~ 170 (432)
T 3ei9_A 104 RAAIAKTFYGGLGIGDD----DVFVSDGAKCDIS-RLQVMFGSNVTIAVQDPSYPAYVDSS--------VIMGQTGQFNT 170 (432)
T ss_dssp HHHHHHHHHTTTTCCGG----GEEEESCHHHHHH-HHHHHHCTTCCEEEEESCCTHHHHHH--------HHHTCSCCEET
T ss_pred HHHHHHHHHccCCCCcc----eEEECCChHHHHH-HHHHHcCCCCEEEEeCCCCHHHHHHH--------HHcCCcccccc
Confidence 98888888766666654 599999999 555 56888999999999997777664322 2222
Q ss_pred -----eeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccC---HHHHHHHHHhcCCEEEEecccccc
Q 023191 166 -----IFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISG 235 (286)
Q Consensus 166 -----~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~-~~n-~g~~~~---l~~I~~ia~~~~~~vivD~a~~~g 235 (286)
..++.++++.+ .++..|+++ .+ ++++|+++ |+| +|...+ +++|+++|++||+++|+|++|+..
T Consensus 171 ~~~~~~~~~~~~~~~~-~~~~~~l~~-----~~-~~~~v~l~~p~NPtG~~~~~~~l~~l~~la~~~~~~li~Dea~~~~ 243 (432)
T 3ei9_A 171 DVQKYGNIEYMRCTPE-NGFFPDLST-----VG-RTDIIFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMY 243 (432)
T ss_dssp TTTEETTCEEEECCGG-GTTSCCGGG-----CC-CCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGG
T ss_pred cccccCceEEeccCcc-cCCcCChhh-----CC-CCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEccchHhh
Confidence 12444543321 234566443 23 78999997 766 666554 677788899999999999998754
Q ss_pred ccccCCCC-CCC---CcceEEEeCCCCCC--CCCCceEEEEecch
Q 023191 236 LVAAGVIP-SPF---EYADVVTTTTHKSL--RGPRGAMIFFRKGV 274 (286)
Q Consensus 236 ~~~~~~~~-~~~---~~~D~v~~s~~K~l--~gp~gG~l~~~~~~ 274 (286)
........ ..+ ...++++.|++|+| .|.+.|++++++++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~r~G~~~~~~~~ 288 (432)
T 3ei9_A 244 MSDDNPRSIFEIPGAEEVAMETASFSNYAGFTGVRLGWTVIPKKL 288 (432)
T ss_dssp CCSSCCSSGGGSTTGGGTEEEEEESHHHHCTTTTCCEEEECCTTC
T ss_pred ccCCCCCChhhcCCCCCeEEEEecchhccCCcccceEEEEEChHH
Confidence 33211110 001 13568999999987 34455999998877
No 133
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=99.81 E-value=1.6e-19 Score=165.36 Aligned_cols=220 Identities=12% Similarity=0.009 Sum_probs=147.0
Q ss_pred cCceecCCCCCC-CHHHHHHhccccccCCC--CCCCC---CcccCCcchHHHHHHHHHHHHHHHCC----CCCCCcceeE
Q 023191 47 KGLELIPSENFT-SVSVMQAVGSVMTNKYS--EGYPG---ARYYGGNEYIDMAESLCQKRALEAFR----LDPEKWGVNV 116 (286)
Q Consensus 47 ~~i~L~~~e~~~-~~~v~~a~~~~l~~~~~--~~~~~---~~~~~~~~~~~~l~~~~~~~~~~~~g----~~~~~~~~~v 116 (286)
..|+|...+++. .+.+.+++.+....... +|... ...|+...+..++++++.+++.+.++ ++++ +|
T Consensus 39 ~~i~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~~~~~~~~~~----~v 114 (435)
T 3piu_A 39 GIIQMGLAENQLCFDLLESWLAKNPEAAAFKKNGESIFAELALFQDYHGLPAFKKAMVDFMAEIRGNKVTFDPN----HL 114 (435)
T ss_dssp SBEECSSCCCCSSHHHHHHHHHHCTTGGGTEETTEECHHHHHHCCCTTCCHHHHHHHHHHHHHHTTTSSCCCGG----GE
T ss_pred CeEEeccccccccHHHHHHHHHhCccccccccccccccccccccCCCCCcHHHHHHHHHHHHHhhCCCCCCCHH----HE
Confidence 357888888865 55666666554321110 01000 02345556678899888888887665 4443 59
Q ss_pred EeCCChH-HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccc-cceeeeEEEecccCCCCCCCCHHHHHHHhhhc
Q 023191 117 QSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKIS-AVSIFFETMPYRLNESTGYIDYDQLEKSATLF 194 (286)
Q Consensus 117 ~~~sG~~-a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~ 194 (286)
++++|++ ++.+++.+++++||.|+++.+.|.++.. .+. ..|.+++.++++.+ .++.+|+++|++++++.
T Consensus 115 ~~~~gg~~a~~~~~~~l~~~gd~vl~~~p~~~~~~~--------~~~~~~g~~~~~~~~~~~-~~~~~d~~~l~~~l~~~ 185 (435)
T 3piu_A 115 VLTAGATSANETFIFCLADPGEAVLIPTPYYPGFDR--------DLKWRTGVEIVPIHCTSS-NGFQITETALEEAYQEA 185 (435)
T ss_dssp EEEEHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHH--------HTTTTTCCEEEEEECCGG-GTSCCCHHHHHHHHHHH
T ss_pred EEcCChHHHHHHHHHHhcCCCCeEEECCCccccHHH--------HHHHhcCCEEEEeeCCCc-cCCcCCHHHHHHHHHHH
Confidence 9999999 8888999999999999999977766542 223 45666655654322 34679999999998752
Q ss_pred -----CCcEEEEc-CCC-CCCccC---HHHHHHHHHhcCCEEEEeccccccccccCCCCCCC--------------Ccce
Q 023191 195 -----RPKLIVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPF--------------EYAD 250 (286)
Q Consensus 195 -----~tk~v~i~-~~n-~g~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~--------------~~~D 250 (286)
++++|+++ ++| +|...+ +++|+++|++||+++|+|++|+.+........... ....
T Consensus 186 ~~~~~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 265 (435)
T 3piu_A 186 EKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEVWQRV 265 (435)
T ss_dssp HHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSSCCCCHHHHHHC-------CGGGGE
T ss_pred HhcCCCeEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcCHHHhccccccccccCCCCCE
Confidence 78888887 666 676554 57888999999999999999876443322111100 0123
Q ss_pred EEEeCCCCCCC--CCCceEEEEec-chhhhhc
Q 023191 251 VVTTTTHKSLR--GPRGAMIFFRK-GVKEINK 279 (286)
Q Consensus 251 ~v~~s~~K~l~--gp~gG~l~~~~-~~~~~~~ 279 (286)
+++.|+||+|+ |.+.|++++++ .+.+..+
T Consensus 266 i~i~s~sK~~g~~G~r~G~~~~~~~~~~~~~~ 297 (435)
T 3piu_A 266 HVVYSLSKDLGLPGFRVGAIYSNDDMVVAAAT 297 (435)
T ss_dssp EEEEESSSSSCCGGGCEEEEEESCHHHHHHHH
T ss_pred EEEEeeecccCCCceeEEEEEeCCHHHHHHHH
Confidence 88999999984 34459999954 4555444
No 134
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=99.81 E-value=4e-19 Score=163.30 Aligned_cols=161 Identities=16% Similarity=0.113 Sum_probs=123.9
Q ss_pred HHHHHHHHHHCCCCCCCcceeEEeCCChHHHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecc
Q 023191 95 SLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYR 174 (286)
Q Consensus 95 ~~~~~~~~~~~g~~~~~~~~~v~~~sG~~a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~ 174 (286)
+.+++++++++|.+. .|++++|+.++.+++.+++++||+|+++++.|+++..... ..+...|.+++.++
T Consensus 117 ~~l~~~lA~l~g~~~-----~v~~~sG~~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~----~~~~~~G~~v~~v~-- 185 (445)
T 1qgn_A 117 VVLEEKISALEGAES-----TLLMASGMCASTVMLLALVPAGGHIVTTTDCYRKTRIFIE----TILPKMGITATVID-- 185 (445)
T ss_dssp HHHHHHHHHHHTCSE-----EEEESCHHHHHHHHHHHHSCSSCEEEEETTSCHHHHHHHH----HTGGGGTCEEEEEC--
T ss_pred HHHHHHHHHHhCCCc-----EEEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHH----HHHHHcCCEEEEeC--
Confidence 345578888888752 5999999887777889999999999999987776543111 01234465554443
Q ss_pred cCCCCCCCCHHHHHHHhhhcCC-cEEEEc-CCC-CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCC-cce
Q 023191 175 LNESTGYIDYDQLEKSATLFRP-KLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFE-YAD 250 (286)
Q Consensus 175 ~~~~~~~~d~e~l~~~i~~~~t-k~v~i~-~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~-~~D 250 (286)
.+ |++++++++++ +| ++|+++ ++| +|.+.|+++|+++|++||+++|+|++|+.+... .++. ++|
T Consensus 186 ~~------d~~~l~~ai~~-~tv~lV~le~p~NptG~v~dl~~I~~la~~~g~~livD~a~~~~~~~-----~~~~~g~D 253 (445)
T 1qgn_A 186 PA------DVGALELALNQ-KKVNLFFTESPTNPFLRCVDIELVSKLCHEKGALVCIDGTFATPLNQ-----KALALGAD 253 (445)
T ss_dssp SS------CHHHHHHHHHH-SCEEEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTCTTTC-----CTTTTTCS
T ss_pred CC------CHHHHHHHhcc-CCCCEEEEeCCCCCCCcccCHHHHHHHHHHcCCEEEEECCCcccccC-----CccccCCE
Confidence 22 89999999988 89 999997 666 678899999999999999999999999866432 1222 599
Q ss_pred EEEeCCCCCCCCCC---ceEEEEecchhhhh
Q 023191 251 VVTTTTHKSLRGPR---GAMIFFRKGVKEIN 278 (286)
Q Consensus 251 ~v~~s~~K~l~gp~---gG~l~~~~~~~~~~ 278 (286)
+++.|+||+++|+. +|++++++++.+.+
T Consensus 254 iv~~S~sK~~gg~gd~~~G~l~~~~~l~~~l 284 (445)
T 1qgn_A 254 LVLHSATKFLGGHNDVLAGCISGPLKLVSEI 284 (445)
T ss_dssp EEEECTTTTTTCSSSCCCEEEEECHHHHHHH
T ss_pred EEEECCcccccccccceEEEEEECHHHHHHH
Confidence 99999999998875 79999998766544
No 135
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9
Probab=99.81 E-value=1.6e-20 Score=173.33 Aligned_cols=172 Identities=13% Similarity=0.095 Sum_probs=124.7
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH--HHHHHHHHhcC--CCCeEEeccCCCCcccCccccccccccccce
Q 023191 90 IDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP--SNFQVYTALLK--PHDRIMALDLPHGGHLSHGYQTDTKKISAVS 165 (286)
Q Consensus 90 ~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~--a~~~~l~a~~~--~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g 165 (286)
..++++++++++++++|++. . +++|+|++ ++++++.++.. +|+.|++++++|.++.. .+...|
T Consensus 131 ~~~~~~~~~~~la~~~g~~~----~-~~~t~g~te~a~~~al~~~~~~~~~~~vi~~~~~h~s~~~--------~~~~~G 197 (456)
T 2z67_A 131 MYALTNKILESFFKQLGLNV----H-AIATPISTGMSISLCLSAARKKYGSNVVIYPYASHKSPIK--------AVSFVG 197 (456)
T ss_dssp HHHHHHHHHHHHHHHTTCCC----E-EEEESSCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHH--------HHHHTT
T ss_pred HHHHHHHHHHHHHHHcCCCC----C-EEEeCcHHHHHHHHHHHHHHHhcCCCEEEEECCCcHHHHH--------HHHHcC
Confidence 66788899999999999976 3 78888877 44445555433 77889999977776432 344567
Q ss_pred eeeEEEeccc-CCCCCCCCHHHHHHHh-hh---cCCcEEEEc-CCC-CCCccCHHHHHHHHHhcCCEEEEeccccc---c
Q 023191 166 IFFETMPYRL-NESTGYIDYDQLEKSA-TL---FRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHIS---G 235 (286)
Q Consensus 166 ~~~~~v~~~~-~~~~~~~d~e~l~~~i-~~---~~tk~v~i~-~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~---g 235 (286)
.+++.+++.. + +++.+|+++|++++ ++ .++++|+++ ++| +|.+.|+++|+++|+++|+++++|+||+. |
T Consensus 198 ~~~~~v~~~~~~-~~~~~d~~~l~~~i~~~~~~~~~~~vv~~~~nn~tG~i~~l~~I~~la~~~g~~v~vD~A~~~~~~g 276 (456)
T 2z67_A 198 MNMRLVETVLDG-DRVYVPVEDIENAIKKEIELGNRPCVLSTLTFFPPRNSDDIVEIAKICENYDIPHIINGAYAIQNNY 276 (456)
T ss_dssp CEEEEECCEEET-TEEECCHHHHHHHHHHHHHTTCCEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTTTTCHH
T ss_pred CCceEEEEeccC-CCCCcCHHHHHHHHHHHhhCCCeEEEEEeCCCCCCCCcCCHHHHHHHHHHcCCcEEEECcchHHHHH
Confidence 6666665321 3 56789999999999 42 367777666 545 78999999999999999999999988653 3
Q ss_pred ccccCCCCCCCCcceEEEeCCCCCCCCCCc-eEEEEec-chhh
Q 023191 236 LVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRK-GVKE 276 (286)
Q Consensus 236 ~~~~~~~~~~~~~~D~v~~s~~K~l~gp~g-G~l~~~~-~~~~ 276 (286)
..+.+...... ++|++++|+|||+++|.| |++++++ ++.+
T Consensus 277 ~~~~~~~~~~~-~~D~~~~s~hK~~~~p~g~G~l~~~~~~~~~ 318 (456)
T 2z67_A 277 YLEKLKKAFKY-RVDAVVSSSDKNLLTPIGGGLVYSTDAEFIK 318 (456)
T ss_dssp HHHHHHHHHTS-CCSEEEEEHHHHHCCCSSCEEEEESCHHHHH
T ss_pred hhHHHHHhhCC-CCCEEEEcCCCCcCCCCCeEEEEEcCHHHHh
Confidence 32222111111 499999999999888887 9999964 4544
No 136
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=99.81 E-value=3.8e-19 Score=158.94 Aligned_cols=203 Identities=16% Similarity=0.098 Sum_probs=137.9
Q ss_pred cCceecCCCCC--CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-
Q 023191 47 KGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP- 123 (286)
Q Consensus 47 ~~i~L~~~e~~--~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~- 123 (286)
+.++|..++++ +++.+++++.+.+... .+|+. .+..+++ +.+++++|++++ +|++|+|++
T Consensus 25 ~~idl~~~~~~~~~~~~v~~a~~~~~~~~--~~y~~-------~~~~~l~----~~la~~~~~~~~----~v~~~~g~~~ 87 (364)
T 1lc5_A 25 QLLDFSANINPLGMPVSVKRALIDNLDCI--ERYPD-------ADYFHLH----QALARHHQVPAS----WILAGNGETE 87 (364)
T ss_dssp GSEECSSCCCTTCCCHHHHHHHHHTGGGG--GSCCC-------TTCHHHH----HHHHHHHTSCGG----GEEEESSHHH
T ss_pred ceEEeccccCCCCCCHHHHHHHHHHHHHh--hcCCC-------CCHHHHH----HHHHHHHCcCHH----HEEECCCHHH
Confidence 57899888774 6899999998877531 12321 2334555 666667788764 599999999
Q ss_pred HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-
Q 023191 124 SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG- 202 (286)
Q Consensus 124 a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~- 202 (286)
++.+++.++ +||+|+++.+.|.++. ..+...|.+++.++++.+ +++.+ ++++.+.+.+ ++++|+++
T Consensus 88 al~~~~~~~--~gd~vl~~~p~y~~~~--------~~~~~~g~~~~~v~~~~~-~~~~~-l~~~~~~~~~-~~~~v~i~~ 154 (364)
T 1lc5_A 88 SIFTVASGL--KPRRAMIVTPGFAEYG--------RALAQSGCEIRRWSLREA-DGWQL-TDAILEALTP-DLDCLFLCT 154 (364)
T ss_dssp HHHHHHHHH--CCSEEEEEESCCTHHH--------HHHHHTTCEEEEEECCGG-GTTCC-CTTHHHHCCT-TCCEEEEES
T ss_pred HHHHHHHHc--CCCeEEEeCCCcHHHH--------HHHHHcCCeEEEEeCCcc-cccch-hHHHHHhccC-CCCEEEEeC
Confidence 777677777 7899999996665543 234456666655654321 23333 4656666655 78988886
Q ss_pred CCC-CCCccC---HHHHHHHHHhcCCEEEEecccccccccc-CCCCC-CCCcceEEEeCCCCCCC--CCCceEEE-Eecc
Q 023191 203 ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAA-GVIPS-PFEYADVVTTTTHKSLR--GPRGAMIF-FRKG 273 (286)
Q Consensus 203 ~~n-~g~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~~-~~~~~-~~~~~D~v~~s~~K~l~--gp~gG~l~-~~~~ 273 (286)
++| +|...+ +++|+++|++||+++|+|++|+.+.... ..... ...+.|+++.|+||+|+ |.+.|+++ .+++
T Consensus 155 p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~ 234 (364)
T 1lc5_A 155 PNNPTGLLPERPLLQAIADRCKSLNINLILDEAFIDFIPHETGFIPALKDNPHIWVLRSLTKFYAIPGLRLGYLVNSDDA 234 (364)
T ss_dssp SCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGSTTCCCSGGGCTTCTTEEEEEESTTTTTCTTTCCEEEECCCHH
T ss_pred CCCCCCCCCCHHHHHHHHHHhhhcCcEEEEECcChhhccCccchhhHhccCCCEEEEEECchhhcCCccceEEEEECCHH
Confidence 766 777777 8999999999999999999987543310 11100 11137899999999985 33459999 8887
Q ss_pred hhhhhc
Q 023191 274 VKEINK 279 (286)
Q Consensus 274 ~~~~~~ 279 (286)
+.+..+
T Consensus 235 ~~~~l~ 240 (364)
T 1lc5_A 235 AMARMR 240 (364)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 765554
No 137
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0
Probab=99.81 E-value=5.3e-19 Score=160.73 Aligned_cols=226 Identities=14% Similarity=0.117 Sum_probs=152.1
Q ss_pred ccccccChH-HHHHHHHHHHH-HHcCceecCCCC-------CCCHHHHHHhcccc-ccCCCCCCCCCcccCCcchHHHHH
Q 023191 25 APLEVVDPE-IADIIEHEKAR-QWKGLELIPSEN-------FTSVSVMQAVGSVM-TNKYSEGYPGARYYGGNEYIDMAE 94 (286)
Q Consensus 25 ~~~~~~~~~-~~~~~~~~~~~-~~~~i~L~~~e~-------~~~~~v~~a~~~~l-~~~~~~~~~~~~~~~~~~~~~~l~ 94 (286)
..+...+++ ++.......+. ..+.|+|..|+. ++++.+++++. .+ .... ...|+...+..+|+
T Consensus 6 ~~~~~~~~~~i~~~~~~~~~~~~~~~I~l~~G~~~d~~~~~~~~~~v~~a~~-~~~~~~~------~~~Y~~~~G~~~lr 78 (405)
T 3k7y_A 6 SSLENIEVDNILKTAREFKEDTCEEKINLSIGVCCNDDGDLHIFDSVLNADK-LVTENYK------EKPYLLGNGTEDFS 78 (405)
T ss_dssp GGCCCCCCCHHHHHHHHHTTSSCSSCEECSCSSCBCTTSSBCCCHHHHHHHH-HHHHHCC------CCCCCTTSSCHHHH
T ss_pred hcCCCCCCChHHHHHHHHhcCCCcCcEEeeeeeeECCCCCCcccHHHHHHHH-HhcCCCC------CCCCCCCCCcHHHH
Confidence 345556665 44444432221 136799998851 35788888876 33 2211 12245667889999
Q ss_pred HHHHHHHHHHCCCC--CCCcceeEEeCCChH-HHHHHHHHhcC--CCCeEEeccCCCCcccCccccccccccccceeeeE
Q 023191 95 SLCQKRALEAFRLD--PEKWGVNVQSLSGSP-SNFQVYTALLK--PHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFE 169 (286)
Q Consensus 95 ~~~~~~~~~~~g~~--~~~~~~~v~~~sG~~-a~~~~l~a~~~--~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 169 (286)
+++.+++.+..+.. ++. .+|++|+|++ ++.+++.++++ | |+|++++ |.|+.|...+...|.+++
T Consensus 79 ~aia~~~~~~~~~~~~~~~--i~i~~t~G~~~al~~~~~~l~~~~~-d~Vlv~~--------P~y~~~~~~~~~~g~~~~ 147 (405)
T 3k7y_A 79 TLTQNLIFGNNSKYIEDKK--ICTIQCIGGTGAIFVLLEFLKMLNV-ETLYVTN--------PPYINHVNMIESRGFNLK 147 (405)
T ss_dssp HHHHHHHHCSSCTTTTTTC--EEEEEEEHHHHHHHHHHHHHHTTTC-CEEEEES--------SCCHHHHHHHHTTTCEEE
T ss_pred HHHHHHHcCCCCccccccc--eEEEEcCchHHHHHHHHHHHHhcCC-CEEEEeC--------CCCHhHHHHHHHcCCeEE
Confidence 99999987665543 222 2468899999 88778888877 9 9999999 666666656778887776
Q ss_pred EEecccCCCCCCCCHHHHHHHhhhc-CCcEEEEc-C-CC-CCCccC---HHHHHHHHHhcCCEEEEeccccccccccCCC
Q 023191 170 TMPYRLNESTGYIDYDQLEKSATLF-RPKLIVAG-A-SA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVI 242 (286)
Q Consensus 170 ~v~~~~~~~~~~~d~e~l~~~i~~~-~tk~v~i~-~-~n-~g~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~ 242 (286)
.+|+. +.+++.+|++++++.+.+. ++++++++ + +| +|...+ +++|+++|++|+++||+|+++. +....+..
T Consensus 148 ~v~~~-~~~~~~~d~~~l~~~l~~~~~~~~i~l~~~~~NPTG~~~s~~~~~~l~~~~~~~~~~vi~De~Y~-~l~~~~~~ 225 (405)
T 3k7y_A 148 YINFF-DYNLIDINYDLFLNDLRNIPNGSSVILQISCYNPCSVNIEEKYFDEIIEIVLHKKHVIIFDIAYQ-GFGHTNLE 225 (405)
T ss_dssp EECCE-ETTTTEECHHHHHHHHHHSCSSCEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEEESCT-TTSSSSTT
T ss_pred EEecc-ccccCCcCHHHHHHHHHhCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCeEEEEecCcc-cccCCCcc
Confidence 67642 3346899999999999752 46788886 4 45 665544 7788999999999999999964 33221110
Q ss_pred C--C------CCCcceEEEeCCCCCCC--CCCceEEEE
Q 023191 243 P--S------PFEYADVVTTTTHKSLR--GPRGAMIFF 270 (286)
Q Consensus 243 ~--~------~~~~~D~v~~s~~K~l~--gp~gG~l~~ 270 (286)
. . .....-+++.|++|+|+ |.|-|++++
T Consensus 226 ~~~~~~~~~~~~~~~~i~~~S~SK~~~l~GlRiG~~~~ 263 (405)
T 3k7y_A 226 EDVLLIRKFEEKNIAFSVCQSFSKNMSLYGERAGALHI 263 (405)
T ss_dssp GGGHHHHHHHTTTCCEEEEEECTTTSCCTTTTEEEEEE
T ss_pred cchHHHHHHHhcCCcEEEEeeCCccCCCccccceEEEE
Confidence 0 0 00013377999999874 778899864
No 138
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=99.81 E-value=1e-19 Score=162.42 Aligned_cols=200 Identities=17% Similarity=0.101 Sum_probs=139.6
Q ss_pred cCceecCCCCC--CCHHHHHHhccccccCC--CCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCCh
Q 023191 47 KGLELIPSENF--TSVSVMQAVGSVMTNKY--SEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS 122 (286)
Q Consensus 47 ~~i~L~~~e~~--~~~~v~~a~~~~l~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~ 122 (286)
+.|+|..++++ +++.+++++.+.+.+.. ..+|+. ....+++ +.+++++|++++ +|++|+|+
T Consensus 27 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~~-------~~~~~lr----~~la~~~g~~~~----~i~~t~g~ 91 (360)
T 3hdo_A 27 SWIKLNTNENPYPPSPEVVKAILEELGPDGAALRIYPS-------ASSQKLR----EVAGELYGFDPS----WIIMANGS 91 (360)
T ss_dssp TSEECSSCCCSSCCCHHHHHHHHHHHTTTCGGGGSCCC-------SSCHHHH----HHHHHHHTCCGG----GEEEESSH
T ss_pred ceeeccCCCCCCCCCHHHHHHHHHHHhcccchhhcCCC-------CchHHHH----HHHHHHhCcCcc----eEEEcCCH
Confidence 57899988884 58999999988876520 112322 1224444 677777788764 49999999
Q ss_pred H-HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEE
Q 023191 123 P-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA 201 (286)
Q Consensus 123 ~-a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i 201 (286)
+ ++.+++.+++++||+|+++++.|.++. ..+...|.+++.++ .+ +++.+ +++++. .+++++++
T Consensus 92 ~~al~~~~~~l~~~gd~Vl~~~p~~~~~~--------~~~~~~g~~~~~v~--~~-~~~~~--~~l~~~---~~~~~v~i 155 (360)
T 3hdo_A 92 DEVLNNLIRAFAAEGEEIGYVHPSYSYYG--------TLAEVQGARVRTFG--LT-GDFRI--AGFPER---YEGKVFFL 155 (360)
T ss_dssp HHHHHHHHHHHCCTTCEEEEESSSCTHHH--------HHHHHHTCEEEEEC--BC-TTSSB--TTCCSS---BCSSEEEE
T ss_pred HHHHHHHHHHHhCCCCEEEEcCCChHHHH--------HHHHHCCCEEEEee--CC-CCCCH--HHHHhh---cCCCEEEE
Confidence 9 888899999999999999996665543 24456676665555 44 34444 444332 35788888
Q ss_pred c-CCC-CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCC---CcceEEEeCCCCCCC--CCCceEEEEecch
Q 023191 202 G-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPF---EYADVVTTTTHKSLR--GPRGAMIFFRKGV 274 (286)
Q Consensus 202 ~-~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~---~~~D~v~~s~~K~l~--gp~gG~l~~~~~~ 274 (286)
+ ++| +|...|+++|.++|+++|+++|+|++|+.. .. . ....+ .+.++++.|++|+++ |.+.|++++++++
T Consensus 156 ~~p~nptG~~~~~~~l~~l~~~~~~~li~De~~~~~-~~-~-~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~ 232 (360)
T 3hdo_A 156 TTPNAPLGPSFPLEYIDELARRCAGMLVLDETYAEF-AE-S-NALELVRRHENVVVTRTLSKSYSLAGMRIGLAIARPEV 232 (360)
T ss_dssp ESSCTTTCCCCCHHHHHHHHHHBSSEEEEECTTGGG-SS-C-CCTHHHHHCSSEEEEEESTTTTSCTTSCCEEEECCHHH
T ss_pred eCCCCCCCCCcCHHHHHHHHHHCCCEEEEECChHhh-CC-c-chhHHhccCCCEEEEecchHhhcCCccceeeEeeCHHH
Confidence 7 666 789999999999999999999999998742 11 1 11010 125588999999974 4455999998887
Q ss_pred hhhhcc
Q 023191 275 KEINKQ 280 (286)
Q Consensus 275 ~~~~~~ 280 (286)
.+..++
T Consensus 233 ~~~~~~ 238 (360)
T 3hdo_A 233 IAALDK 238 (360)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 766553
No 139
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=99.80 E-value=4.3e-20 Score=167.75 Aligned_cols=223 Identities=12% Similarity=0.060 Sum_probs=141.8
Q ss_pred HcCceecCCCCCCCH----HHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCC
Q 023191 46 WKGLELIPSENFTSV----SVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSG 121 (286)
Q Consensus 46 ~~~i~L~~~e~~~~~----~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG 121 (286)
.+.++|..+.+.+.+ .+.+++.+.+.+... ......|+...+..++++++.+++.+.+|+..+. .+|++|+|
T Consensus 31 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~--~~i~~t~G 106 (417)
T 3g7q_A 31 PGAIMLGGGNPAHIPAMQDYFQTLLTDMVESGKA--ADALCNYDGPQGKTALLNALAVLLRETLGWDIEP--QNIALTNG 106 (417)
T ss_dssp -CCEECSCCCCCCCHHHHHHHHHHHHHHHHHTHH--HHHHHSTTCTTSHHHHHHHHHHHHHHHHCCCCCG--GGEEEESC
T ss_pred CCceEecCcCCCCCChHHHHHHHHHHHHhhCCcc--cceeeccCCCCCcHHHHHHHHHHHHHHhCCCCCc--ccEEEeCC
Confidence 477999998886644 444555544432100 0000124555778899999999998887764332 36999999
Q ss_pred hH-HHHHHHHHhcCCCC-----eEEec-cCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhc
Q 023191 122 SP-SNFQVYTALLKPHD-----RIMAL-DLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF 194 (286)
Q Consensus 122 ~~-a~~~~l~a~~~~Gd-----~Vl~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~ 194 (286)
++ ++.+++.+++++|| +|+++ ++.|.++........ .+.+......+++.+..++.+|+++++ +.+
T Consensus 107 ~t~al~~~~~~l~~~gd~~~~~~vi~~~~p~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~d~~~l~--~~~- 179 (417)
T 3g7q_A 107 SQSAFFYLFNLFAGRRADGSTKKVLFPLAPEYIGYADSGLEDD----LFVSARPNIELLPEGQFKYHVDFEHLH--IGE- 179 (417)
T ss_dssp HHHHHHHHHHHHSBC----CCBEEEESSCCCHHHHHC-----C----CEEECCCEEEEEGGGEEEEECCGGGCC--CCT-
T ss_pred cHHHHHHHHHHHcCCCccCCcceEEEeCCCccccchhhccchh----hhccccCcccccCCcccccccCHHHhc--ccc-
Confidence 99 88889999999988 89997 866655533211000 112222333443322124578998887 555
Q ss_pred CCcEEEEc-CCC-CCCccC---HHHHHHHHHhcCCEEEEecccccccccc---CCCCCCCCcceEEEeCCCCCC-CCCCc
Q 023191 195 RPKLIVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAA---GVIPSPFEYADVVTTTTHKSL-RGPRG 265 (286)
Q Consensus 195 ~tk~v~i~-~~n-~g~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~~---~~~~~~~~~~D~v~~s~~K~l-~gp~g 265 (286)
++++|+++ ++| +|...+ +++|+++|++||+++|+|++|+...... +..+ ...+.++++.|++|+. .|.+.
T Consensus 180 ~~~~v~~~~p~NptG~~~~~~~~~~l~~~a~~~~~~li~De~~~~~~~~~~~~~~~~-~~~~~~i~~~s~sK~~~~G~r~ 258 (417)
T 3g7q_A 180 ETGMICVSRPTNPTGNVITDEELMKLDRLANQHNIPLVIDNAYGVPFPGIIFSEARP-LWNPNIILCMSLSKLGLPGSRC 258 (417)
T ss_dssp TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTTCCBCSCCCC-CCCTTEEEEEESGGGTCTTSCC
T ss_pred CceEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEeCCCcccccccccccccc-CCCCCEEEEEechhccCCCcce
Confidence 88999887 777 777777 8899999999999999999986422111 1111 1124778999999943 22234
Q ss_pred eEEEEecchhhhhcc
Q 023191 266 AMIFFRKGVKEINKQ 280 (286)
Q Consensus 266 G~l~~~~~~~~~~~~ 280 (286)
|+++.++++.+..++
T Consensus 259 G~~~~~~~~~~~~~~ 273 (417)
T 3g7q_A 259 GIIIANDKTITAIAN 273 (417)
T ss_dssp EEEECCHHHHHHHHH
T ss_pred EEEEeCHHHHHHHHH
Confidence 999998887766543
No 140
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3
Probab=99.80 E-value=2.4e-19 Score=165.78 Aligned_cols=205 Identities=16% Similarity=0.115 Sum_probs=137.4
Q ss_pred cCceecCC-CC--CCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH
Q 023191 47 KGLELIPS-EN--FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP 123 (286)
Q Consensus 47 ~~i~L~~~-e~--~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~ 123 (286)
+.++|..+ ++ ++++.+.++....... ..+ .+...|+. .+. ..++++++++++++|.+. .+++++|+.
T Consensus 90 ~~i~l~~g~~~~~~~~~~i~~a~~~~~~~-~~~--~~~~~Y~~-~g~-~~~~~l~~~la~~~g~~~-----~i~~~sGt~ 159 (464)
T 1ibj_A 90 LLVNLDNKFDPFDAMSTPLYQTATFKQPS-AIE--NGPYDYTR-SGN-PTRDALESLLAKLDKADR-----AFCFTSGMA 159 (464)
T ss_dssp HHTCCCCSSCTTCCSSCCCCCCSBCCCSS-SSC--CCSCSBTT-TCC-HHHHHHHHHHHHHHTCSE-----EEEESSHHH
T ss_pred eEEECCCCCCCCCCCCccHHhhhhhhhhc-ccc--cCCccccC-CCC-HHHHHHHHHHHHHhCCCe-----EEEECCHHH
Confidence 45777665 33 4566776666543111 000 01111221 122 256667799999998752 366666665
Q ss_pred HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-
Q 023191 124 SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG- 202 (286)
Q Consensus 124 a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~- 202 (286)
++.+++ .++++||+|+++++.|+++..... ..+...|.+++.++ .+ |++++++++++ +|++|+++
T Consensus 160 al~~~l-~~~~~Gd~Vi~~~~~y~~~~~~~~----~~~~~~G~~v~~v~--~~------d~~~l~~~i~~-~tk~v~l~~ 225 (464)
T 1ibj_A 160 ALSAVT-HLIKNGEEIVAGDDVYGGSDRLLS----QVVPRSGVVVKRVN--TT------KLDEVAAAIGP-QTKLVWLES 225 (464)
T ss_dssp HHHHHH-TTSCTTCEEEEESSCCHHHHHHHH----HTSGGGTCEEEEEC--TT------SHHHHHHHCCS-SEEEEEECS
T ss_pred HHHHHH-HHhCCCCEEEEECCCchhHHHHHH----HHHHHcCCEEEEeC--CC------CHHHHHHHhcc-CceEEEEeC
Confidence 776555 488999999999987776542210 11234565555443 22 89999999987 89999998
Q ss_pred CCC-CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCCcceEEEeCCCCCCCCCC---ceEEEEec-chhhh
Q 023191 203 ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPR---GAMIFFRK-GVKEI 277 (286)
Q Consensus 203 ~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~---gG~l~~~~-~~~~~ 277 (286)
++| +|.+.++++|+++|++||+++|+|++|+.|....... . ++|+++.|+||+|+||. +|++++++ ++.+.
T Consensus 226 p~NptG~v~~l~~i~~la~~~gi~livDea~~~g~~~~~~~-~---~~div~~S~sK~~~g~~Gl~~G~l~~~~~~l~~~ 301 (464)
T 1ibj_A 226 PTNPRQQISDIRKISEMAHAQGALVLVDNSIMSPVLSRPLE-L---GADIVMHSATKFIAGHSDVMAGVLAVKGEKLAKE 301 (464)
T ss_dssp SCTTTCCCCCHHHHHHHHHTTTCEEEEECTTTCTTTCCGGG-T---TCSEEEEETTTTTTCSSCCCCEEEEECSHHHHHH
T ss_pred CCCCCCEeecHHHHHHHHHHcCCEEEEECCCcccccCChhh-c---CCEEEEECCcccccCCCCCcEEEEEEChHHHHHH
Confidence 666 7788899999999999999999999998764321111 1 48999999999998774 49999986 56544
Q ss_pred hc
Q 023191 278 NK 279 (286)
Q Consensus 278 ~~ 279 (286)
.+
T Consensus 302 l~ 303 (464)
T 1ibj_A 302 VY 303 (464)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 141
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=99.80 E-value=1.1e-19 Score=165.87 Aligned_cols=161 Identities=13% Similarity=0.052 Sum_probs=120.6
Q ss_pred HHHHHHHHHCCCCCCCcceeEEeCCChHHHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEeccc
Q 023191 96 LCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRL 175 (286)
Q Consensus 96 ~~~~~~~~~~g~~~~~~~~~v~~~sG~~a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~ 175 (286)
.+++.+++++|.+. .+++++|+.++.+++.+++++||+|+++++.|.+...+... .....|.++..++ .
T Consensus 86 ~le~~lA~l~g~~~-----~i~~ssGt~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~----~l~~~G~~v~~v~--~ 154 (415)
T 2fq6_A 86 SLQQAMCELEGGAG-----CVLFPCGAAAVANSILAFIEQGDHVLMTNTAYEPSQDFCSK----ILSKLGVTTSWFD--P 154 (415)
T ss_dssp HHHHHHHHHHTCSE-----EEEESSHHHHHHHHHHTTCCTTCEEEEETTSCHHHHHHHHH----TGGGGTCEEEEEC--T
T ss_pred HHHHHHHHHhCCCe-----EEEeCCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHH----HHHHcCcEEEEEC--C
Confidence 34477888888753 47776665588778999999999999999888776543211 1123454444442 2
Q ss_pred CCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccCHHHHHHHHHh--cCCEEEEeccccccccccCCCCCCCC-cce
Q 023191 176 NESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNK--QKAIMLADMAHISGLVAAGVIPSPFE-YAD 250 (286)
Q Consensus 176 ~~~~~~~d~e~l~~~i~~~~tk~v~i~-~~n-~g~~~~l~~I~~ia~~--~~~~vivD~a~~~g~~~~~~~~~~~~-~~D 250 (286)
+ |++++++++++ +||+|+++ ++| +|.+.|+++|+++|++ +|+++|+|++|+.+... .++. ++|
T Consensus 155 ~------d~~~le~ai~~-~tklV~~e~~~NptG~v~dl~~I~~la~~~~~g~~livD~a~a~~~~~-----~p~~~g~D 222 (415)
T 2fq6_A 155 L------IGADIVKHLQP-NTKIVFLESPGSITMEVHDVPAIVAAVRSVVPDAIIMIDNTWAAGVLF-----KALDFGID 222 (415)
T ss_dssp T------CGGGGGGGCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHCTTCEEEEECTTTTTTSS-----CGGGGTCS
T ss_pred C------CHHHHHHhhcc-CCcEEEEECCCCCCCEeecHHHHHHHHHhhcCCCEEEEECCCcccccC-----CccccCCe
Confidence 2 78999999987 89999997 666 7789999999999999 99999999998865321 1222 599
Q ss_pred EEEeCCCCCCCCCC---ceEEEEecchhhhhc
Q 023191 251 VVTTTTHKSLRGPR---GAMIFFRKGVKEINK 279 (286)
Q Consensus 251 ~v~~s~~K~l~gp~---gG~l~~~~~~~~~~~ 279 (286)
++++|+||+++++. +|++++++++.+.++
T Consensus 223 iv~~S~sK~lg~~g~~~~G~l~~~~~~~~~l~ 254 (415)
T 2fq6_A 223 VSIQAATKYLVGHSDAMIGTAVCNARCWEQLR 254 (415)
T ss_dssp EEEEETTTTTTCSSSCCCEEEEECTTTHHHHH
T ss_pred EEEEeCccccCCCCCceEEEEEeCHHHHHHHH
Confidence 99999999998875 699999887655443
No 142
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=99.80 E-value=9e-20 Score=164.26 Aligned_cols=176 Identities=7% Similarity=0.006 Sum_probs=125.7
Q ss_pred chHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-HHHHHHHHhcCCCCeEEeccCCCCcccCcccccccccccccee
Q 023191 88 EYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSI 166 (286)
Q Consensus 88 ~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~ 166 (286)
....++.+++++.+++++|.+. .|++++|++ ++.+++ ..+.+||+|+++++.|.+.. ... .+...|.
T Consensus 31 ~~~~~~~~~~~~~l~~~~~~~~-----~v~~~~sgt~a~~~~~-~~~~~gd~vi~~~~~~~~~~--~~~----~~~~~g~ 98 (379)
T 3ke3_A 31 KAFQEVMNDLLSNLKTVYNAEA-----AVIIPGSGTYGMEAVA-RQLTIDEDCLIIRNGWFSYR--WTQ----ILEKGKF 98 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSE-----EEEEESCHHHHHHHHH-HHHCTTCEEEEEECSHHHHH--HHH----HHHHHCC
T ss_pred HHHHHHHHHHHHHHHHHhCCCC-----EEEEcCChhHHHHHHH-HhCCCCCeEEEEeCCchhHH--HHH----HHHHhCC
Confidence 3455777888999999999872 488877777 777555 45689999999986665431 110 1112232
Q ss_pred --eeEEEecccCC-----CC-CCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccC---HHHHHHHHHhcCCEEEEecccc
Q 023191 167 --FFETMPYRLNE-----ST-GYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHI 233 (286)
Q Consensus 167 --~~~~v~~~~~~-----~~-~~~d~e~l~~~i~~~~tk~v~i~-~~n-~g~~~~---l~~I~~ia~~~~~~vivD~a~~ 233 (286)
+++.++.+... .. ..+|++++++++++.+|++|++. ..| +|...| +++|.++|++||+++|+|++|+
T Consensus 99 ~~~~~~~~~~~~g~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~~~~G~~~~~~~l~~i~~~~~~~~~~li~D~~~~ 178 (379)
T 3ke3_A 99 AKSSTVLTAERTEDTEAPKPFAPVDIETAVAKIKEDKSAIVYAPHVETSSGIILSEEYIKALSEAVHSVGGLLVIDCIAS 178 (379)
T ss_dssp SSEEEEEECEESSCCSSCCCEECCCHHHHHHHHHHHTCSEEEEESEETTTTEECCHHHHHHHHHHHHHTTCEEEEECTTC
T ss_pred CCceEEEeccccccccccCCCCCCCHHHHHHHHhhcCCcEEEEEeecCCCceeCCHHHHHHHHHHHHHcCCEEEEEeccc
Confidence 34444432210 01 25899999999965489998886 344 677888 9999999999999999999987
Q ss_pred ccccccCCCCCCCCcceEEEeCCCCCCCCCCc-eEEEEecchhhhhc
Q 023191 234 SGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEINK 279 (286)
Q Consensus 234 ~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~g-G~l~~~~~~~~~~~ 279 (286)
|....+.... ++|++++|+||+|+||.| |++++++++.+..+
T Consensus 179 -g~~~~~~~~~---~~d~~~~s~~K~l~~~~g~g~~~~~~~~~~~l~ 221 (379)
T 3ke3_A 179 -GCVWLDMKEL---GIDVLISAPQKGWSSTPCAGLVMLSAAAIKKVE 221 (379)
T ss_dssp -TTCCCCHHHH---TCSEEEECTTTTTCSCCCEEEEEECHHHHHHHH
T ss_pred -CCcccccccc---CCCEEEecchhhcCCCCceEEEEECHHHHHhhh
Confidence 6443332222 489999999999999988 99999988766554
No 143
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=99.80 E-value=2.4e-19 Score=161.75 Aligned_cols=227 Identities=10% Similarity=0.025 Sum_probs=147.4
Q ss_pred ccccChHHHHHHHHHHHHH--HcCceecCCC---C--CC--CHHHHHHhcc-ccccCCCCCCCCCcccCCcchHHHHHHH
Q 023191 27 LEVVDPEIADIIEHEKARQ--WKGLELIPSE---N--FT--SVSVMQAVGS-VMTNKYSEGYPGARYYGGNEYIDMAESL 96 (286)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~--~~~i~L~~~e---~--~~--~~~v~~a~~~-~l~~~~~~~~~~~~~~~~~~~~~~l~~~ 96 (286)
+...+++....+....... .+.++|..|. + .+ ++.+++++.+ .+.+....+ |+...+..+++++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~y~d~~~~~~~~~~v~~a~~~~~~~~~~~~~------y~~~~g~~~lr~~ 78 (397)
T 3fsl_A 5 VDAYAGDPILTLMERFKEDPRSDKVNLSIGLYYNEDGIIPQLQAVAEAEARLNAQPHGASL------YLPMEGLNCYRHA 78 (397)
T ss_dssp CCCCCCCHHHHHHHHHHTCCCSCCEECSSCCCCCTTSCCCCCHHHHHHHHHHHHSCCCCCC------CCCTTCCHHHHHH
T ss_pred CCCCCCCchhhHHHHHhcCCCCCeEEEeeeEEECCCCCccCcHHHHHHHHhhccCcccccc------CCCCCchHHHHHH
Confidence 3444554444444433322 3568998883 2 23 4899999988 776422112 3344566788888
Q ss_pred HHHHHHHHCCC--CCCCcceeEEeCCChH-HHHHH--HHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEE
Q 023191 97 CQKRALEAFRL--DPEKWGVNVQSLSGSP-SNFQV--YTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETM 171 (286)
Q Consensus 97 ~~~~~~~~~g~--~~~~~~~~v~~~sG~~-a~~~~--l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v 171 (286)
+.+++....+. +++. .+|++|+|++ ++.++ +.+++++||+|+++.+.|.++ ...+...|.+++.+
T Consensus 79 la~~~~~~~~~~~~~~~--~~i~~t~g~~~a~~~~~~~~~~~~~gd~vl~~~p~~~~~--------~~~~~~~g~~~~~~ 148 (397)
T 3fsl_A 79 IAPLLFGADHPVLKQQR--VATIQTLGGSGALKVGADFLKRYFPESGVWVSDPTWENH--------VAIFAGAGFEVSTY 148 (397)
T ss_dssp HHHHHHCTTCHHHHTTC--EEEEEESHHHHHHHHHHHHHHHHCTTCCEEEESSCCHHH--------HHHHHHTTCCEEEE
T ss_pred HHHHHhcCCcccccccc--eEEEEcCCcHHHHHHHHHHHHhcCCCCeEEEeCCCchhH--------HHHHHHcCCceEEE
Confidence 87877655442 3431 1599999999 77766 356689999999999555444 33455667667666
Q ss_pred ecccCCCCCCCCHHHHHHHhhh--cCCcEEEEc-CCC-CCCcc---CHHHHHHHHHhcCCEEEEeccccccccccCCCCC
Q 023191 172 PYRLNESTGYIDYDQLEKSATL--FRPKLIVAG-ASA-YARLY---DYERIRKVCNKQKAIMLADMAHISGLVAAGVIPS 244 (286)
Q Consensus 172 ~~~~~~~~~~~d~e~l~~~i~~--~~tk~v~i~-~~n-~g~~~---~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~ 244 (286)
++..+ +++.+|++++++.+++ .++++++++ ++| +|... ++++|+++|++||+++|+|++|.......+....
T Consensus 149 ~~~~~-~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~ 227 (397)
T 3fsl_A 149 PWYDE-ATNGVRFNDLLATLKTLQAGSIVLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAGMEEDAY 227 (397)
T ss_dssp CCEET-TTTEECHHHHHHHHTTCCTTCEEEECSSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTSSSCTTGGGH
T ss_pred eeeec-cCCcCcHHHHHHHHHhCCCCCEEEEeCCCCCCCCcCCCHHHHHHHHHHHHhCCEEEEEecCchhhccCcccccH
Confidence 64212 4688999999999983 267788877 666 66654 4669999999999999999997643322100000
Q ss_pred ------CCCcceEEEeCCCCCCC--CCCceEEEE
Q 023191 245 ------PFEYADVVTTTTHKSLR--GPRGAMIFF 270 (286)
Q Consensus 245 ------~~~~~D~v~~s~~K~l~--gp~gG~l~~ 270 (286)
......+++.|++|+++ |.+.|++++
T Consensus 228 ~~~~~~~~~~~~i~~~S~SK~~~~~G~riG~~~~ 261 (397)
T 3fsl_A 228 AIRAIASAGLPALVSNSFSKIFSLYGERVGGLSV 261 (397)
T ss_dssp HHHHHHHTTCCEEEEEECTTTTTCGGGCCEEEEE
T ss_pred HHHHHHhcCCCEEEEecccccccCcCCCeeEEEE
Confidence 00124588999999885 444599876
No 144
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=99.80 E-value=1.1e-19 Score=160.36 Aligned_cols=162 Identities=13% Similarity=0.150 Sum_probs=123.2
Q ss_pred HHHHHHHHCCCCCCCcceeEEeCCChHHHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccC
Q 023191 97 CQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLN 176 (286)
Q Consensus 97 ~~~~~~~~~g~~~~~~~~~v~~~sG~~a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~ 176 (286)
+++.+++++|.+ + .+++++|+.++..++.+++++||+|+++++.|.++....... +...|.+++.++ .
T Consensus 3 l~~~la~~~g~~-~----~i~~~sG~~a~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~----~~~~g~~~~~~~--~- 70 (331)
T 1pff_A 3 LEGKIAKLEHAE-A----CAATASGMGAIAASVWTFLKAGDHLISDDCLYGCTHALFEHQ----LRKFGVEVDFID--M- 70 (331)
T ss_dssp HHHHHHHHHTCS-E----EEEESSHHHHHHHHHHHHCCTTCEEEEESCCCHHHHHHHHTH----HHHTTCEEEEEC--T-
T ss_pred HHHHHHHHhCCC-e----EEEeCChHHHHHHHHHHhcCCCCEEEEcCCCcchHHHHHHHH----HHhcCCEEEEeC--C-
Confidence 457888888886 2 588888966888788889999999999998887764332110 112454444443 2
Q ss_pred CCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccCHHHHHHHHHh-cCCEEEEeccccccccccCCCCCCCCcceEEE
Q 023191 177 ESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNK-QKAIMLADMAHISGLVAAGVIPSPFEYADVVT 253 (286)
Q Consensus 177 ~~~~~~d~e~l~~~i~~~~tk~v~i~-~~n-~g~~~~l~~I~~ia~~-~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~ 253 (286)
.|++++++.+++ ++++|+++ ++| +|...|+++|.++|++ +|+++|+|++|+.|...... .. ++|+++
T Consensus 71 -----~d~~~l~~~i~~-~~~~v~~~~~~nptG~~~~~~~i~~~~~~~~~~~li~D~a~~~~~~~~~~-~~---~~d~~~ 140 (331)
T 1pff_A 71 -----AVPGNIEKHLKP-NTRIVYFETPANPTLKVIDIEDAVKQARKQKDILVIVDNTFASPILTNPL-DL---GVDIVV 140 (331)
T ss_dssp -----TSTTHHHHTCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHTTSSSCEEEEECTTTHHHHCCGG-GG---TCSEEE
T ss_pred -----CCHHHHHHhhcC-CCeEEEEECCCCCcCcccCHHHHHHHHhhhcCCEEEEECCCcccccCChh-hc---CCcEEE
Confidence 478899998887 89999997 666 7788899999999999 99999999999987654222 12 489999
Q ss_pred eCCCCCCCCCC---ceEEEEec-chhhhhcc
Q 023191 254 TTTHKSLRGPR---GAMIFFRK-GVKEINKQ 280 (286)
Q Consensus 254 ~s~~K~l~gp~---gG~l~~~~-~~~~~~~~ 280 (286)
+|+||+|++|. +|++++++ ++.+..+.
T Consensus 141 ~s~~K~~~~~~~r~~G~~~~~~~~~~~~l~~ 171 (331)
T 1pff_A 141 HSATKYINGHTDVVAGLVCSRADIIAKVKSQ 171 (331)
T ss_dssp EETTTTTSSSSSCCCEEEEECHHHHHHHHHT
T ss_pred EECccccCCCCCceEEEEEeCcHHHHHHHHH
Confidence 99999998875 68999998 77665543
No 145
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=99.80 E-value=3.6e-19 Score=161.26 Aligned_cols=162 Identities=15% Similarity=0.175 Sum_probs=122.5
Q ss_pred HHHHHHHHHHHHCCCCCCCcceeEEeCCChHHHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEe
Q 023191 93 AESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMP 172 (286)
Q Consensus 93 l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~ 172 (286)
..+++++++++++|.+. .+++++|+.++..++.+++++||+|+++++.|+++...... .+...|.+++.++
T Consensus 65 ~~~~l~~~la~~~g~~~-----~i~~~sG~~a~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~----~~~~~g~~~~~v~ 135 (398)
T 2rfv_A 65 TTDALEKKLAVLERGEA-----GLATASGISAITTTLLTLCQQGDHIVSASAIYGCTHAFLSH----SMPKFGINVRFVD 135 (398)
T ss_dssp HHHHHHHHHHHHHTCSE-----EEEESSHHHHHHHHHHHHCCTTCEEEEESSSCHHHHHHHHT----HHHHTTCEEEEEC
T ss_pred HHHHHHHHHHHHhCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEcCCCcccHHHHHHH----HHHHcCCEEEEeC
Confidence 34455688888888762 48888877788778999999999999999887766432210 0134455454443
Q ss_pred cccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCCcce
Q 023191 173 YRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYAD 250 (286)
Q Consensus 173 ~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~-~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D 250 (286)
.+ |++++++.+++ ++++|+++ ++| +|...|+++|.++|++||+++|+|++|+.+...... .. ++|
T Consensus 136 --~~------d~~~l~~~i~~-~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~-~~---~~d 202 (398)
T 2rfv_A 136 --AA------KPEEIRAAMRP-ETKVVYIETPANPTLSLVDIETVAGIAHQQGALLVVDNTFMSPYCQQPL-QL---GAD 202 (398)
T ss_dssp --TT------SHHHHHHHCCT-TEEEEEEESSBTTTTBCCCHHHHHHHHHHTTCEEEEECTTTCTTTCCGG-GG---TCS
T ss_pred --CC------CHHHHHHhcCC-CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCcccccCCch-hh---CCc
Confidence 22 89999999987 89999997 666 678889999999999999999999999877543211 11 489
Q ss_pred EEEeCCCCCCCCCC---ceEEEEecchhh
Q 023191 251 VVTTTTHKSLRGPR---GAMIFFRKGVKE 276 (286)
Q Consensus 251 ~v~~s~~K~l~gp~---gG~l~~~~~~~~ 276 (286)
+++.|+||+|++|. +|++++++++.+
T Consensus 203 i~~~s~sK~~~~~g~~~~G~~~~~~~~~~ 231 (398)
T 2rfv_A 203 IVVHSVTKYINGHGDVIGGIIVGKQEFID 231 (398)
T ss_dssp EEEEETTTTTTCSSCCCCEEEEECHHHHH
T ss_pred EEEEeCcccccCCCCceEEEEEECHHHHH
Confidence 99999999998875 499999887654
No 146
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=99.80 E-value=1.6e-19 Score=165.00 Aligned_cols=227 Identities=11% Similarity=-0.006 Sum_probs=146.0
Q ss_pred ccChHHHHHHHHHHHHHHcCceecCCCCCC-----CHHHHHHh--ccccccCCCCCCCCCcccCCcchHHHHHHHHHHHH
Q 023191 29 VVDPEIADIIEHEKARQWKGLELIPSENFT-----SVSVMQAV--GSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRA 101 (286)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~i~L~~~e~~~-----~~~v~~a~--~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 101 (286)
...+..++.+.+. ......++|..|.+.. ++.+.+++ .+.+.+. ......|+...+..+++ +.+
T Consensus 17 ~~~~~~~~~~~~~-~~~~~~i~~~~G~p~~~~~p~~~~~~~~~~~~~~~~~~----~~~~~~Y~~~~g~~~lr----~~i 87 (427)
T 3ppl_A 17 LFHEDIKRKFDEL-KSKNLKLDLTRGKPSSEQLDFADELLALPGKGDFKAAD----GTDVRNYGGLDGIVDIR----QIW 87 (427)
T ss_dssp HHHHHHHHHHHHH-HHTCCCEECCCCSCCHHHHHTTGGGGGCSCTTCCBCTT----SCBTTSSCCSSCCHHHH----HHH
T ss_pred HhHHHHHHHHHHh-hcCCceEecCCCCCChHHCCCcHHHHHHhhhHHHhhcc----chhhcCCCCCCCcHHHH----HHH
Confidence 3334444444432 2334678998887632 22455555 4444331 11123355556677777 455
Q ss_pred HHHCCCCCCCcceeEEeCCChH-HH--HHHHHHhcC--C----------CCeEEeccCCCCcccCcccccccccccccee
Q 023191 102 LEAFRLDPEKWGVNVQSLSGSP-SN--FQVYTALLK--P----------HDRIMALDLPHGGHLSHGYQTDTKKISAVSI 166 (286)
Q Consensus 102 ~~~~g~~~~~~~~~v~~~sG~~-a~--~~~l~a~~~--~----------Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~ 166 (286)
+++++++++ +|++|+|++ ++ .+++.++++ | ||+|++++|.|.+ +...+...|.
T Consensus 88 a~~~~~~~~----~i~~t~G~~~al~~~~~~~~l~~~~~g~~~~~~~~~gd~V~v~~p~y~~--------~~~~~~~~g~ 155 (427)
T 3ppl_A 88 ADLLGVPVE----QVLAGDASSLNIMFDVISWSYIFGNNDSVQPWSKEETVKWICPVPGYDR--------HFSITERFGF 155 (427)
T ss_dssp HHHHTSCGG----GEEECSSCHHHHHHHHHHHHHHHCCTTCSSCGGGSSCCEEEEEESCCHH--------HHHHHHHTTC
T ss_pred HHHhCCCcc----eEEEeCCcHHHHHHHHHHHHHhccCCcccccccCCCCCEEEEcCCCcHH--------HHHHHHHcCC
Confidence 555588775 599999999 66 257888877 6 9999999955544 3435556776
Q ss_pred eeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc--CCC-CCCccCHH---HHHHHH-HhcCCEEEEecccccccccc
Q 023191 167 FFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG--ASA-YARLYDYE---RIRKVC-NKQKAIMLADMAHISGLVAA 239 (286)
Q Consensus 167 ~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~--~~n-~g~~~~l~---~I~~ia-~~~~~~vivD~a~~~g~~~~ 239 (286)
+++.+| ++ ++ .+|+++|+++++..++++|++. ++| +|...+.+ +|+++| ++||+++|+|++|+...+..
T Consensus 156 ~~~~v~--~~-~~-g~d~~~l~~~l~~~~~~~v~~~p~~~NPtG~~~~~~~~~~l~~~a~~~~~~~ii~De~y~~~~~~~ 231 (427)
T 3ppl_A 156 EMISVP--MN-ED-GPDMDAVEELVKNPQVKGMWVVPVFSNPTGFTVTEDVAKRLSAMETAAPDFRVVWDNAYAVHTLTD 231 (427)
T ss_dssp EEEEEE--EE-TT-EECHHHHHHHTTSTTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSS
T ss_pred EEEEeC--CC-CC-CCCHHHHHHHHhcCCCeEEEECCCCCCCCCccCCHHHHHHHHHHHhhcCCCEEEEECCCcccccCC
Confidence 666665 44 23 3999999999954478999875 455 67777766 888888 99999999999976433321
Q ss_pred CCC-CCC---------CCcceEEEeCCCCCC-CCCCceEEEEecchhhhhcc
Q 023191 240 GVI-PSP---------FEYADVVTTTTHKSL-RGPRGAMIFFRKGVKEINKQ 280 (286)
Q Consensus 240 ~~~-~~~---------~~~~D~v~~s~~K~l-~gp~gG~l~~~~~~~~~~~~ 280 (286)
... ... ..+.++++.|++|++ +|.+.|++++++++.+..++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~G~r~G~~~~~~~l~~~~~~ 283 (427)
T 3ppl_A 232 EFPEVIDIVGLGEAAGNPNRFWAFTSTSKITLAGAGVSFFLTSAENRKWYTG 283 (427)
T ss_dssp CCCCCCCHHHHHHHTTCTTSEEEEEESTTTSCTTSSCEEEECCHHHHHHHHH
T ss_pred CCCCccchhhhhhccCCCCcEEEEechhhccCcCccEEEEEcCHHHHHHHHH
Confidence 110 000 113678899999974 34455999999887765543
No 147
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=99.80 E-value=4e-19 Score=160.75 Aligned_cols=218 Identities=13% Similarity=0.041 Sum_probs=140.9
Q ss_pred HHHHHHHHHHHHH-HcCceecCCCC--C-----CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHH
Q 023191 33 EIADIIEHEKARQ-WKGLELIPSEN--F-----TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEA 104 (286)
Q Consensus 33 ~~~~~~~~~~~~~-~~~i~L~~~e~--~-----~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 104 (286)
.++.......... .+.|+|..+.. + ..+.+++++.+.+.+....+ |....+..++++++.+++.+.
T Consensus 14 ~i~~~~~~~~~~~~~~~i~l~~g~~~d~~~~~~~~~~v~~a~~~~~~~~~~~~------Y~~~~g~~~lr~~ia~~~~~~ 87 (401)
T 7aat_A 14 PILGVTEAFKRDTNSKKMNLGVGAYRDDNGKPYVLNCVRKAEAMIAAKKMDKE------YLPIAGLADFTRASAELALGE 87 (401)
T ss_dssp HHHHHHHHHHHCCCTTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHTTCCCC------CCCTTCCHHHHHHHHHHHHCT
T ss_pred hhHHHHHHHhhCCCCCceeeeeeeEECCCCCEechHHHHHHHHHhcccccccC------CCCCCCCHHHHHHHHHHhcCC
Confidence 3444444432222 24689887763 1 23467887776654312222 334456778998888888877
Q ss_pred CCC--CCCCcceeEEe--CCChH-HHHHHHHHh---cCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccC
Q 023191 105 FRL--DPEKWGVNVQS--LSGSP-SNFQVYTAL---LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLN 176 (286)
Q Consensus 105 ~g~--~~~~~~~~v~~--~sG~~-a~~~~l~a~---~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~ 176 (286)
+|. +++ +|++ |+|++ ++.+++.++ ++|||+|++++|.|.++. ..+...|.+++.+++..
T Consensus 88 ~~~~~~~~----~i~~v~t~G~~~al~~~~~~l~~~~~~gd~Vlv~~p~~~~~~--------~~~~~~g~~~~~~~~~~- 154 (401)
T 7aat_A 88 NSEAFKSG----RYVTVQGISGTGSLRVGANFLQRFFKFSRDVYLPKPSWGNHT--------PIFRDAGLQLQAYRYYD- 154 (401)
T ss_dssp TCHHHHTT----CEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEEESCCTTHH--------HHHHHTTCEEEEEECEE-
T ss_pred CccccccC----ceEEEecCcchHHHHHHHHHHHHhccCCCEEEEcCCCchhHH--------HHHHHcCCeeEeeeeec-
Confidence 675 344 4766 99998 776566555 499999999996665543 34456676666666432
Q ss_pred CCCCCCCHHHHHHHhhh--cCCcEEEEc-CCC-CCCcc---CHHHHHHHHHhcCCEEEEeccccccccccCC--CCC---
Q 023191 177 ESTGYIDYDQLEKSATL--FRPKLIVAG-ASA-YARLY---DYERIRKVCNKQKAIMLADMAHISGLVAAGV--IPS--- 244 (286)
Q Consensus 177 ~~~~~~d~e~l~~~i~~--~~tk~v~i~-~~n-~g~~~---~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~--~~~--- 244 (286)
.+++.+|++++++.+.+ .++++++++ ++| +|... ++++|+++|++||+++|+|++|...... +. ...
T Consensus 155 ~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~-~~~~~~~~~~ 233 (401)
T 7aat_A 155 PKTCSLDFTGAMEDISKIPEKSIILLHACAHNPTGVDPRQEQWKELASVVKKRNLLAYFDMAYQGFASG-DINRDAWALR 233 (401)
T ss_dssp TTTTEECHHHHHHHHTTSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTS-CHHHHTHHHH
T ss_pred cccCccCHHHHHHHHHhCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEccccccccCC-CccccHHHHH
Confidence 24688999988877753 267888887 666 66444 5788999999999999999997533221 10 000
Q ss_pred ---CCCcceEEEeCCCCCCC--CCCceEEEE
Q 023191 245 ---PFEYADVVTTTTHKSLR--GPRGAMIFF 270 (286)
Q Consensus 245 ---~~~~~D~v~~s~~K~l~--gp~gG~l~~ 270 (286)
......+++.|+||+|+ |.+-|++++
T Consensus 234 ~~~~~~~~~i~~~S~sK~~~~~G~RiG~l~~ 264 (401)
T 7aat_A 234 HFIEQGIDVVLSQSYAKNMGLYGERAGAFTV 264 (401)
T ss_dssp HHHHTTCCCEEEEECTTTSCCGGGCEEEEEE
T ss_pred HHHhcCCcEEEEecCCcccccccCceEEEEE
Confidence 00124588999999874 344588886
No 148
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=99.80 E-value=2.8e-19 Score=159.62 Aligned_cols=196 Identities=16% Similarity=0.114 Sum_probs=132.4
Q ss_pred cCceecCCCCC--CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-
Q 023191 47 KGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP- 123 (286)
Q Consensus 47 ~~i~L~~~e~~--~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~- 123 (286)
+.|+|..++++ +|+.+ + +.. ..+|+. .. ..+++ +.+++++|++++ +|++++|++
T Consensus 30 ~~i~l~~~~~~~~~~~~v--a----~~~--~~~Y~~------~~-~~~lr----~~la~~~~~~~~----~v~~~~G~~~ 86 (356)
T 1fg7_A 30 GDVWLNANEYPTAVEFQL--T----QQT--LNRYPE------CQ-PKAVI----ENYAQYAGVKPE----QVLVSRGADE 86 (356)
T ss_dssp CSEECSSCCCSSCCCCCC--C----CCC--TTSCCC------SS-CHHHH----HHHHHHHTSCGG----GEEEESHHHH
T ss_pred ceEEeeCCCCCCCCCHhH--h----hhh--hccCCC------cc-HHHHH----HHHHHHhCCChH----HEEEcCCHHH
Confidence 56899999985 34444 2 211 112322 12 34455 667777788764 599999998
Q ss_pred HHHHHHHHhcCCC-CeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc
Q 023191 124 SNFQVYTALLKPH-DRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG 202 (286)
Q Consensus 124 a~~~~l~a~~~~G-d~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~ 202 (286)
++.+++++++++| |+|+++++.|.++ ...+...|.+++.++ .+ +++.+|++++++.++ ++++|+++
T Consensus 87 ai~~~~~~~~~~g~d~Vl~~~p~~~~~--------~~~~~~~g~~~~~v~--~~-~~~~~d~~~l~~~i~--~~~~v~l~ 153 (356)
T 1fg7_A 87 GIELLIRAFCEPGKDAILYCPPTYGMY--------SVSAETIGVECRTVP--TL-DNWQLDLQGISDKLD--GVKVVYVC 153 (356)
T ss_dssp HHHHHHHHHCCTTTCEEEECSSSCTHH--------HHHHHHHTCEEEECC--CC-TTSCCCHHHHHTSCT--TEEEEEEE
T ss_pred HHHHHHHHHhCCCCCEEEEeCCChHHH--------HHHHHHcCCEEEEee--CC-CCCCCCHHHHHHHhc--CCCEEEEe
Confidence 8877899999999 9999999655554 334455666555554 44 457899999998886 78999997
Q ss_pred -CCC-CCCccCHHHH---HHHHHhcCCEEEEeccccccccccCCCCC-CCCcceEEEeCCCCCCC--CCCceEEEEecch
Q 023191 203 -ASA-YARLYDYERI---RKVCNKQKAIMLADMAHISGLVAAGVIPS-PFEYADVVTTTTHKSLR--GPRGAMIFFRKGV 274 (286)
Q Consensus 203 -~~n-~g~~~~l~~I---~~ia~~~~~~vivD~a~~~g~~~~~~~~~-~~~~~D~v~~s~~K~l~--gp~gG~l~~~~~~ 274 (286)
++| +|...+.++| +++|+ +|+++|+|++|............ ...+.++++.|++|+|+ |.+.|++++++++
T Consensus 154 ~p~nptG~~~~~~~l~~l~~~~~-~~~~li~De~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~ 232 (356)
T 1fg7_A 154 SPNNPTGQLINPQDFRTLLELTR-GKAIVVADEAYIEFCPQASLAGWLAEYPHLAILRTLSKAFALAGLRCGFTLANEEV 232 (356)
T ss_dssp SSCTTTCCCCCHHHHHHHHHHHT-TTCEEEEECTTGGGSGGGCSGGGTTTCTTEEEEEESSSTTCCGGGCCEEEEECHHH
T ss_pred CCCCCCCCCCCHHHHHHHHHhCC-CCCEEEEEccchhhcCCCcHHHHHhhCCCEEEEecchHhhcCchhhhEEEEeCHHH
Confidence 655 6777775555 55566 89999999998743311111110 00136788999999884 4445999998887
Q ss_pred hhhhc
Q 023191 275 KEINK 279 (286)
Q Consensus 275 ~~~~~ 279 (286)
.+..+
T Consensus 233 ~~~l~ 237 (356)
T 1fg7_A 233 INLLM 237 (356)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 76554
No 149
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=99.80 E-value=3e-19 Score=162.35 Aligned_cols=161 Identities=16% Similarity=0.179 Sum_probs=120.7
Q ss_pred HHHHHHHHHCCCCCCCcceeEEeCCChHHHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEeccc
Q 023191 96 LCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRL 175 (286)
Q Consensus 96 ~~~~~~~~~~g~~~~~~~~~v~~~sG~~a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~ 175 (286)
++++.+++++|.+. .+++++|+.++..++.+++++||+|+++++.|+++..++.. .+...|.+++.++ .
T Consensus 66 ~l~~~ia~~~g~~~-----~i~~~~g~~ai~~~~~~l~~~gd~Vl~~~~~y~~~~~~~~~----~~~~~g~~~~~v~--~ 134 (404)
T 1e5e_A 66 NLEGKIAFLEKTEA-----CVATSSGMGAIAATVLTILKAGDHLISDECLYGCTHALFEH----ALTKFGIQVDFIN--T 134 (404)
T ss_dssp HHHHHHHHHHTCSE-----EEEESSHHHHHHHHHHHHCCTTCEEEEESCCCHHHHHHHHT----HHHHTTCEEEEEC--T
T ss_pred HHHHHHHHHhCCCc-----EEEeCChHHHHHHHHHHHhCCCCEEEEeCCCchhHHHHHHH----HHHHcCCEEEEEC--C
Confidence 34477777778752 36666665588778899999999999999777765442210 1334565554443 3
Q ss_pred CCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccCHHHHHHHHHh-cCCEEEEeccccccccccCCCCCCCC-cceE
Q 023191 176 NESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNK-QKAIMLADMAHISGLVAAGVIPSPFE-YADV 251 (286)
Q Consensus 176 ~~~~~~~d~e~l~~~i~~~~tk~v~i~-~~n-~g~~~~l~~I~~ia~~-~~~~vivD~a~~~g~~~~~~~~~~~~-~~D~ 251 (286)
+ |++++++.+++ +||+|+++ ++| +|.+.|+++|+++|++ +|+++|+|++|+.+.... ++. ++|+
T Consensus 135 ~------d~~~l~~~i~~-~t~~v~l~~p~NptG~v~~l~~i~~la~~~~~~~li~De~~~~~~~~~-----~~~~~~di 202 (404)
T 1e5e_A 135 A------IPGEVKKHMKP-NTKIVYFETPANPTLKIIDMERVCKDAHSQEGVLVIADNTFCSPMITN-----PVDFGVDV 202 (404)
T ss_dssp T------STTHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHTSTTCEEEEECTTTCTTTCC-----GGGGTCSE
T ss_pred C------CHHHHHHhcCC-CCcEEEEECCCCCCCcccCHHHHHHHHHhhcCCEEEEECCCchhhhCC-----ccccCCEE
Confidence 2 78899999987 89999997 666 7788899999999999 999999999998765321 112 4899
Q ss_pred EEeCCCCCCCCCC---ceEEEEecchhh-hhc
Q 023191 252 VTTTTHKSLRGPR---GAMIFFRKGVKE-INK 279 (286)
Q Consensus 252 v~~s~~K~l~gp~---gG~l~~~~~~~~-~~~ 279 (286)
++.|+||+|++|. +|++++++++.+ ..+
T Consensus 203 ~~~S~sK~~~~~g~ri~G~~~~~~~~~~~~l~ 234 (404)
T 1e5e_A 203 VVHSATKYINGHTDVVAGLICGKADLLQQIRM 234 (404)
T ss_dssp EEEETTTTTTCSSCCCCEEEEECHHHHHHHHH
T ss_pred EEEcCccccCCCCCCeEEEEEECHHHHHHHHH
Confidence 9999999998875 499999987655 444
No 150
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=99.79 E-value=2.3e-19 Score=163.72 Aligned_cols=232 Identities=15% Similarity=0.019 Sum_probs=146.0
Q ss_pred cccccccChHHHHHHHHHHHHHHcCceecCCCCC-----CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHH
Q 023191 24 NAPLEVVDPEIADIIEHEKARQWKGLELIPSENF-----TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQ 98 (286)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~i~L~~~e~~-----~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 98 (286)
++.+......++....+.. .....++|..++++ +++.+++++.+.+.... + .....|+...+..+++
T Consensus 11 ~~~l~~~~~~~~~~~~~l~-~~~~~i~l~~g~~~~~~~~~~~~~~~a~~~~~~~~~--~-~~~~~Y~~~~G~~~lr---- 82 (422)
T 3d6k_A 11 AARLAQVREEVTAKYAELK-AKNLSLDLTRGKPSAEQLDLSNDLLSLPGGDFRTKD--G-VDCRNYGGLLGIADIR---- 82 (422)
T ss_dssp -------CHHHHHHHHHHH-HTTCCEECCCCSCCHHHHHTTGGGGGCSTTCCBCTT--C-CBTTSSCCSSCCHHHH----
T ss_pred HHHHHhhHHHHHHHHHHHh-ccCCeEeCCCCCCChhhCCCcHHHHHHHHHHHhhcc--c-hhhhCCCCCCCCHHHH----
Confidence 4556667778888766643 34567899998884 34466666655421100 0 0011245555666777
Q ss_pred HHHHHHCCCCCCCcceeEEeCCChH-HH--HHHHHHhcCC------------CCeEEeccCCCCcccCcccccccccccc
Q 023191 99 KRALEAFRLDPEKWGVNVQSLSGSP-SN--FQVYTALLKP------------HDRIMALDLPHGGHLSHGYQTDTKKISA 163 (286)
Q Consensus 99 ~~~~~~~g~~~~~~~~~v~~~sG~~-a~--~~~l~a~~~~------------Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~ 163 (286)
+.++++++++++ +|++|+|++ ++ .+++.++.++ ||+|++++|.|.+ +...+..
T Consensus 83 ~~ia~~~~~~~~----~i~~t~G~~~al~l~~~~~~l~~~~~~g~~~~~~~d~~~Vl~~~p~y~~--------~~~~~~~ 150 (422)
T 3d6k_A 83 ELWAEALGLPAD----LVVAQDGSSLNIMFDLISWSYTWGNNDSSRPWSAEEKVKWLCPVPGYDR--------HFTITEH 150 (422)
T ss_dssp HHHHHHHTCCGG----GEEECSSCHHHHHHHHHHHHHHHCCTTCSSCGGGSSCCEEEEEESCCHH--------HHHHHHH
T ss_pred HHHHHHhCCChh----HEEEecchHHHHHHHHHHHHhcCcccccccccccCCCCEEEEeCCccHH--------HHHHHHH
Confidence 445555578765 599999999 65 4466777665 3479999955444 4435556
Q ss_pred ceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEE-Ec-CCC-CCCccCHH---HHHHHHH-hcCCEEEEeccccc-c
Q 023191 164 VSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIV-AG-ASA-YARLYDYE---RIRKVCN-KQKAIMLADMAHIS-G 235 (286)
Q Consensus 164 ~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~-i~-~~n-~g~~~~l~---~I~~ia~-~~~~~vivD~a~~~-g 235 (286)
.|.+++.+++ +. + .+|++++++.+++.++|+|+ ++ ++| +|...+.+ +|+++|+ +||+++|+|++|+. +
T Consensus 151 ~g~~~~~v~~--~~-~-g~d~~~l~~~l~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~~~~~~~~~li~De~y~~~~ 226 (422)
T 3d6k_A 151 FGFEMINVPM--TD-E-GPDMGVVRELVKDPQVKGMWTVPVFGNPTGVTFSEQTCRELAEMSTAAPDFRIVWDNAYALHT 226 (422)
T ss_dssp HTCEEEEEEE--ET-T-EECHHHHHHHHTSTTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCB
T ss_pred cCCEEEecCC--CC-C-CCCHHHHHHHHhcCCCeEEEEcCCCCCCCCCCCCHHHHHHHHHHHhhccCCEEEEECCccccc
Confidence 7766666654 42 2 39999999999754788888 45 666 77777765 7778888 99999999999874 2
Q ss_pred ccccCCCCCCC---------CcceEEEeCCCCCC-CCCCceEEEEecchhhhhc
Q 023191 236 LVAAGVIPSPF---------EYADVVTTTTHKSL-RGPRGAMIFFRKGVKEINK 279 (286)
Q Consensus 236 ~~~~~~~~~~~---------~~~D~v~~s~~K~l-~gp~gG~l~~~~~~~~~~~ 279 (286)
....+....++ ...++++.|++|++ +|.+.|++++++++.+..+
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~GlriG~~~~~~~l~~~l~ 280 (422)
T 3d6k_A 227 LSDEFPIVHNVIEFAQAAGNPNRFWFMSSTSKITHAGSGVSFFASSKENIEWYA 280 (422)
T ss_dssp SSSCCCCCCCHHHHHHHTTCTTCEEEEEESTTTSCTTSSCEEEECCHHHHHHHH
T ss_pred cCCCCCCCcChhhHhhccCCCCcEEEEcChhhhcCcccceEEEEeCHHHHHHHH
Confidence 22211111111 13578899999963 3445699999988766554
No 151
>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*
Probab=99.79 E-value=3.3e-20 Score=165.16 Aligned_cols=202 Identities=10% Similarity=0.108 Sum_probs=139.6
Q ss_pred CceecCCCCCCCHHHHHHhccccccCCCCCCCCCcccCC---cchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCCh-H
Q 023191 48 GLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGG---NEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS-P 123 (286)
Q Consensus 48 ~i~L~~~e~~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~---~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~-~ 123 (286)
.++++++..++|+.+++++.+.+.+ + ..++...|.. ..+..++.+++++++++++|++.. .+|++++|+ +
T Consensus 4 ~~~~~~g~~~~p~~v~~a~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~---~~v~~~~g~gt 77 (360)
T 1w23_A 4 VFNFNAGPSALPKPALERAQKELLN-F--NDTQMSVMELSHRSQSYEEVHEQAQNLLRELLQIPND---YQILFLQGGAS 77 (360)
T ss_dssp CEECCSSSCCCCHHHHHHHHHTSSS-S--TTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHHTCCTT---EEEEEESSHHH
T ss_pred eEeecCCCcCCCHHHHHHHHHHhhh-h--ccccccccccCCCCHHHHHHHHHHHHHHHHHhCCCCC---ceEEEECCcch
Confidence 5778888888999999999988754 2 1111111111 344556777788999999999632 369999998 7
Q ss_pred -HHHHHHHHhcCC---CCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHH-HhhhcCCcE
Q 023191 124 -SNFQVYTALLKP---HDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEK-SATLFRPKL 198 (286)
Q Consensus 124 -a~~~~l~a~~~~---Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~-~i~~~~tk~ 198 (286)
++.+++.+++.+ ||.|+++.+.|.+ .. .+...| +++.+++ +++++.+|++++++ ++++ +||+
T Consensus 78 ~al~~~~~~l~~~~~~g~~vi~~~~~~~~--------~~-~~~~~g-~~~~v~~--~~~~~~~d~~~l~~~~i~~-~~k~ 144 (360)
T 1w23_A 78 LQFTMLPMNLLTKGTIGNYVLTGSWSEKA--------LK-EAKLLG-ETHIAAS--TKANSYQSIPDFSEFQLNE-NDAY 144 (360)
T ss_dssp HHHHHHHHHHCCTTCEEEEEECSHHHHHH--------HH-HHHTTS-EEEEEEE--CGGGTSCSCCCGGGCCCCT-TEEE
T ss_pred HHHHHHHHHhcCCCCcccEEEecchhHHH--------HH-HHHHhC-CeEEeec--ccccCcCCccchHhhccCC-CCCE
Confidence 888788888765 5667766533322 11 133456 6666664 32244578899988 7876 8999
Q ss_pred EEEc-CCC-CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCCcceEEEeCCCCCCCCCCc-eEEEEecchh
Q 023191 199 IVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVK 275 (286)
Q Consensus 199 v~i~-~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~g-G~l~~~~~~~ 275 (286)
|+++ ++| +|...+ +++++||+++|+|++|+.+....++ ...|++++|+||+|+ |.| |++++++++.
T Consensus 145 v~~~~~~nptG~~~~-----~i~~~~~~~li~D~a~~~~~~~~~~-----~~~di~~~s~sK~~~-~~G~G~~~~~~~~~ 213 (360)
T 1w23_A 145 LHITSNNTIYGTQYQ-----NFPEINHAPLIADMSSDILSRPLKV-----NQFGMIYAGAQKNLG-PSGVTVVIVKKDLL 213 (360)
T ss_dssp EEEESEETTTTEECS-----SCCCCCSSCEEEECTTTTTSSCCCG-----GGCSEEEEETTTTTS-CTTCEEEEEEHHHH
T ss_pred EEEeCCCCCcceecc-----cccccCCceEEEechhhcCCCCcCc-----ccCCEEEEEcccccC-CCCcEEEEEcHHHH
Confidence 9987 555 676655 3334899999999999887654322 224899999999885 768 9999998766
Q ss_pred hhhc
Q 023191 276 EINK 279 (286)
Q Consensus 276 ~~~~ 279 (286)
+..+
T Consensus 214 ~~~~ 217 (360)
T 1w23_A 214 NTKV 217 (360)
T ss_dssp CSCC
T ss_pred hhcc
Confidence 5443
No 152
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=99.79 E-value=6.6e-19 Score=160.62 Aligned_cols=160 Identities=19% Similarity=0.196 Sum_probs=118.9
Q ss_pred HHHHHHHHHHHCCCCCCCcceeEEeCCChHHHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEec
Q 023191 94 ESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPY 173 (286)
Q Consensus 94 ~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~ 173 (286)
.+++++++++++|.+. .+++++|+.++.+++.+++++||+|+++++.|.++...... .....|.+++.++
T Consensus 83 ~~~l~~~la~~~g~~~-----~~~~~sG~~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~----~~~~~g~~~~~v~- 152 (414)
T 3ndn_A 83 VSVFEERLRLIEGAPA-----AFATASGMAAVFTSLGALLGAGDRLVAARSLFGSCFVVCSE----ILPRWGVQTVFVD- 152 (414)
T ss_dssp HHHHHHHHHHHHTCSE-----EEEESSHHHHHHHHHHTTCCTTCEEEEESCCCHHHHHHHHT----HHHHTTCEEEEEC-
T ss_pred HHHHHHHHHHHHCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEcCCccchHHHHHHH----HHHHcCcEEEEeC-
Confidence 3445588888888643 35666665588878999999999999999777765432210 1122455454443
Q ss_pred ccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCCcceE
Q 023191 174 RLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADV 251 (286)
Q Consensus 174 ~~~~~~~~~d~e~l~~~i~~~~tk~v~i~-~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~ 251 (286)
.+ |++++++++++ +|++|+++ ++| +|...++++|+++|+++|+++|+|++|+.+.....+ .. ++|+
T Consensus 153 -~~------d~~~l~~ai~~-~t~~v~le~p~NptG~~~~l~~i~~la~~~g~~livDe~~~~~~~~~~~-~~---g~di 220 (414)
T 3ndn_A 153 -GD------DLSQWERALSV-PTQAVFFETPSNPMQSLVDIAAVTELAHAAGAKVVLDNVFATPLLQQGF-PL---GVDV 220 (414)
T ss_dssp -TT------CHHHHHHHTSS-CCSEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTHHHHCCCG-GG---TCSE
T ss_pred -CC------CHHHHHHhcCC-CCeEEEEECCCCCCCccccHHHHHHHHHHcCCEEEEECCCcccccCCch-hc---CCCe
Confidence 32 89999999987 89999997 666 778899999999999999999999999866543221 11 4899
Q ss_pred EEeCCCCCCCCCC---ceEEEEecchh
Q 023191 252 VTTTTHKSLRGPR---GAMIFFRKGVK 275 (286)
Q Consensus 252 v~~s~~K~l~gp~---gG~l~~~~~~~ 275 (286)
++.|++|+|+++. +|+++++++..
T Consensus 221 v~~S~sK~l~~~G~~~~G~vv~~~~~~ 247 (414)
T 3ndn_A 221 VVYSGTKHIDGQGRVLGGAILGDREYI 247 (414)
T ss_dssp EEEETTTTTTCSSCCCCEEEEECHHHH
T ss_pred EeccCCccccCCCCceEEEEEECHHHH
Confidence 9999999997744 69999987644
No 153
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=99.79 E-value=6.3e-19 Score=159.79 Aligned_cols=160 Identities=16% Similarity=0.177 Sum_probs=121.9
Q ss_pred HHHHHHHHHHHCCCCCCCcceeEEeCCChHHHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEec
Q 023191 94 ESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPY 173 (286)
Q Consensus 94 ~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~ 173 (286)
.+++++.+++++|.+. .+++++|+.++..++.+++++||+|+++++.|+++....... ....|.+++.++
T Consensus 67 ~~~l~~~la~~~g~~~-----~i~~~sG~~a~~~~l~~~~~~gd~vl~~~~~~~~~~~~~~~~----~~~~g~~~~~~~- 136 (398)
T 1gc0_A 67 LNLLEARMASLEGGEA-----GLALASGMGAITSTLWTLLRPGDEVLLGNTLYGCTFAFLHHG----IGEFGVKLRHVD- 136 (398)
T ss_dssp HHHHHHHHHHHHTCSE-----EEEESSHHHHHHHHHHHHCCTTCEEEEESSCCSHHHHHHHHT----GGGGTCEEEEEC-
T ss_pred HHHHHHHHHHHhCCCc-----EEEECCHHHHHHHHHHHHhcCCCEEEEeCCCchhHHHHHHHH----HHHcCCEEEEEC-
Confidence 3345578888888762 588888866888799999999999999998888765432111 123454444343
Q ss_pred ccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCCcceE
Q 023191 174 RLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADV 251 (286)
Q Consensus 174 ~~~~~~~~~d~e~l~~~i~~~~tk~v~i~-~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~ 251 (286)
. .|++++++.+++ +|++|+++ ++| +|...|+++|+++|++||+++|+|++|+.+.....+ .. ++|+
T Consensus 137 -~------~d~~~l~~~i~~-~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~~~~~~~~~~~~-~~---~~d~ 204 (398)
T 1gc0_A 137 -M------ADLQALEAAMTP-ATRVIYFESPANPNMHMADIAGVAKIARKHGATVVVDNTYCTPYLQRPL-EL---GADL 204 (398)
T ss_dssp -T------TCHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHGGGTCEEEEECTTTHHHHCCGG-GG---TCSE
T ss_pred -C------CCHHHHHHhcCC-CCeEEEEECCCCCCcccccHHHHHHHHHHcCCEEEEECCCcccccCCch-hh---CceE
Confidence 2 289999999987 89999997 666 678889999999999999999999999877653221 11 4899
Q ss_pred EEeCCCCCCCCCC---ceEEEEecchh
Q 023191 252 VTTTTHKSLRGPR---GAMIFFRKGVK 275 (286)
Q Consensus 252 v~~s~~K~l~gp~---gG~l~~~~~~~ 275 (286)
++.|+||+|+||. ||++++++++.
T Consensus 205 ~~~S~sK~~~~~~~~~~G~l~~~~~~~ 231 (398)
T 1gc0_A 205 VVHSATKYLSGHGDITAGIVVGSQALV 231 (398)
T ss_dssp EEEETTTTTTCSSSCCCEEEEECHHHH
T ss_pred EEECCccccCCCCCCeEEEEEEChHHH
Confidence 9999999998876 59999987644
No 154
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=99.79 E-value=2.3e-19 Score=163.91 Aligned_cols=214 Identities=14% Similarity=0.066 Sum_probs=147.5
Q ss_pred HcCceecCCCC-C--CCHHH--HHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHC-CCCCCCccee---E
Q 023191 46 WKGLELIPSEN-F--TSVSV--MQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAF-RLDPEKWGVN---V 116 (286)
Q Consensus 46 ~~~i~L~~~e~-~--~~~~v--~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-g~~~~~~~~~---v 116 (286)
.+.++|..+++ . .++.+ ++++.+.+......+ |+...+..++++++.+++.+.. ++++ .+ |
T Consensus 47 ~~~i~l~~g~~~~~~~~~~~~~~~a~~~~~~~~~~~~------y~~~~g~~~lr~~ia~~~~~~~~~~~~----~~~~~i 116 (430)
T 2x5f_A 47 STTYNATIGMATNKDGKMFASSLDAMFNDLTPDEIFP------YAPPQGIEELRDLWQQKMLRDNPELSI----DNMSRP 116 (430)
T ss_dssp TCSEECCCSSCEETTEECCCHHHHTTBSSCCGGGTSS------CCCTTCCHHHHHHHHHHHHHHCTTCCG----GGBCCC
T ss_pred CCcEEeeeeeccCCCCchhhHHHHHHHHhcCcccccc------cCCCCCCHHHHHHHHHHHhccCcccCC----CccceE
Confidence 46789988877 3 24555 777777654311112 3334556788888888776664 4444 36 8
Q ss_pred EeCCChH-HHHHHHHHhcCCCCeEEeccCCCCcccCcccccccccccc-ceeeeEEEecccCCCCCCCCHHHHHHHhhhc
Q 023191 117 QSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISA-VSIFFETMPYRLNESTGYIDYDQLEKSATLF 194 (286)
Q Consensus 117 ~~~sG~~-a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~ 194 (286)
++|+|++ ++.+++.++++|||+|+++++.|.++. ..+.. .|.+++.++ .+.+++.+|++++++.+++.
T Consensus 117 ~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~--------~~~~~~~g~~~~~~~--~~~~~~~~d~~~l~~~l~~~ 186 (430)
T 2x5f_A 117 IVTNALTHGLSLVGDLFVNQDDTILLPEHNWGNYK--------LVFNTRNGANLQTYP--IFDKDGHYTTDSLVEALQSY 186 (430)
T ss_dssp EEESHHHHHHHHHHHHHCCTTCEEEEESSCCTHHH--------HHHTTTTCCEEEEEC--CBCTTSCBCSHHHHHHHHHC
T ss_pred EEcCCchHHHHHHHHHHhCCCCEEEEcCCcCccHH--------HHHHHhcCCeEEEEe--ccCccCCcCHHHHHHHHHhc
Confidence 9999988 888899999999999999996665543 23445 666565554 44324789999999998753
Q ss_pred --CCcEEEEc-CCC-CCCccC---HHHHHHHHHh-----cCCEEEEeccccccccccCCCCC---CC---Ccc---eEEE
Q 023191 195 --RPKLIVAG-ASA-YARLYD---YERIRKVCNK-----QKAIMLADMAHISGLVAAGVIPS---PF---EYA---DVVT 253 (286)
Q Consensus 195 --~tk~v~i~-~~n-~g~~~~---l~~I~~ia~~-----~~~~vivD~a~~~g~~~~~~~~~---~~---~~~---D~v~ 253 (286)
++++++++ |+| +|...+ +++|+++|++ ||+++|+|++|+........... .+ ... ++++
T Consensus 187 ~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 266 (430)
T 2x5f_A 187 NKDKVIMILNYPNNPTGYTPTHKEVTTIVEAIKALANKGTKVIAVVDDAYYGLFYEDVYTQSLFTALTNLHSNAILPIRL 266 (430)
T ss_dssp CSSEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTTCEEEEEEECTTTTCBCSSSCCSCHHHHHHTTCCTTEEEEEE
T ss_pred CCCCEEEEEcCCCCCCCCcCCHHHHHHHHHHHHhhhhccCCEEEEEehhcccccCCcccchHHHHHHhhccCCcceEEEE
Confidence 67888887 766 677777 8899999999 99999999998754332111111 11 124 6789
Q ss_pred eCCCCCCCCC--CceEEEE---ecchhhhhc
Q 023191 254 TTTHKSLRGP--RGAMIFF---RKGVKEINK 279 (286)
Q Consensus 254 ~s~~K~l~gp--~gG~l~~---~~~~~~~~~ 279 (286)
.|+||+|+.| +.|++++ ++++.+..+
T Consensus 267 ~s~sK~~~~~G~riG~~~~~~~~~~~~~~l~ 297 (430)
T 2x5f_A 267 DGATKEFFAWGFRVGFMTFGTSDQTTKEVLE 297 (430)
T ss_dssp EEHHHHTTCGGGCCEEEEEBCCCHHHHHHHH
T ss_pred EecccCCCCCCCCeEEEEEecCCHHHHHHHH
Confidence 9999988533 3499999 777765554
No 155
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.79 E-value=1e-18 Score=157.56 Aligned_cols=161 Identities=20% Similarity=0.158 Sum_probs=120.7
Q ss_pred HHHHHHHHHCCCCCCCcceeEEeCCChHHHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEeccc
Q 023191 96 LCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRL 175 (286)
Q Consensus 96 ~~~~~~~~~~g~~~~~~~~~v~~~sG~~a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~ 175 (286)
.+++.++++++.+ + .|++++|+.++..++.+++++||+|+++.+.|.+...+... .+...|.+++.++ .
T Consensus 56 ~l~~~la~~~~~~-~----~i~~~sGt~a~~~~~~~~~~~g~~vl~~~~~~~~~~~~~~~----~~~~~g~~~~~~~--~ 124 (386)
T 1cs1_A 56 VVQRALAELEGGA-G----AVLTNTGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDS----LAKRGCYRVLFVD--Q 124 (386)
T ss_dssp HHHHHHHHHHTCS-E----EEEESSHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHH----HHTTTSCEEEEEC--T
T ss_pred HHHHHHHHHhCCC-c----EEEeCCHHHHHHHHHHHHhCCCCEEEEecCCcHhHHHHHHH----HHHhcCCEEEEeC--C
Confidence 3447777788876 2 58889995588878899999999999999888764432210 1123454444443 2
Q ss_pred CCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCCcceEEE
Q 023191 176 NESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVT 253 (286)
Q Consensus 176 ~~~~~~~d~e~l~~~i~~~~tk~v~i~-~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~ 253 (286)
.|++++++.+++ ++++|+++ ++| +|...++++|.++|++||+++|+|++|+.+...... .. ++|+++
T Consensus 125 ------~d~~~l~~~i~~-~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~-~~---~~di~~ 193 (386)
T 1cs1_A 125 ------GDEQALRAALAE-KPKLVLVESPSNPLLRVVDIAKICHLAREVGAVSVVDNTFLSPALQNPL-AL---GADLVL 193 (386)
T ss_dssp ------TCHHHHHHHHHT-CCSEEEEECSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTCTTTCCGG-GG---TCSEEE
T ss_pred ------CCHHHHHHhhcc-CCcEEEEeCCCCCCCcccCHHHHHHHHHHcCCEEEEECCCcccccCCcc-cc---CceEEE
Confidence 289999999987 89999998 556 678889999999999999999999999876543221 11 489999
Q ss_pred eCCCCCCCCCCc---eEEEEec-chhhhh
Q 023191 254 TTTHKSLRGPRG---AMIFFRK-GVKEIN 278 (286)
Q Consensus 254 ~s~~K~l~gp~g---G~l~~~~-~~~~~~ 278 (286)
+|+||+|++|.+ |++++++ ++.+..
T Consensus 194 ~s~sK~~~~~~~~~~G~~~~~~~~l~~~l 222 (386)
T 1cs1_A 194 HSCTKYLNGHSDVVAGVVIAKDPDVVTEL 222 (386)
T ss_dssp EETTTTTTCSSCCCCEEEEESSHHHHHHH
T ss_pred EcCcccccCCCCceeEEEEeCcHHHHHHH
Confidence 999999988764 9999987 665544
No 156
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=99.79 E-value=1.7e-18 Score=154.18 Aligned_cols=202 Identities=13% Similarity=0.073 Sum_probs=137.6
Q ss_pred HcCceecCCCCC--CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH
Q 023191 46 WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP 123 (286)
Q Consensus 46 ~~~i~L~~~e~~--~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~ 123 (286)
.+.|+|..++++ +++.+++++.+.+.... +|+. .+..+++ +.++++++++++ +|++|+|++
T Consensus 26 ~~~idl~~~~~~~~~~~~v~~a~~~~~~~~~--~y~~-------~~~~~l~----~~la~~~~~~~~----~i~~~~g~t 88 (361)
T 3ftb_A 26 RELLDYSSNINPLGIPKSFLNNIDEGIKNLG--VYPD-------VNYRRLN----KSIENYLKLKDI----GIVLGNGAS 88 (361)
T ss_dssp --CEETTCCCCTTCSCHHHHTTHHHHHHGGG--SCCC-------TTCHHHH----HHHHHHHTCCSC----EEEEESSHH
T ss_pred CCEEEecCCCCCCCCCHHHHHHHHHHHHHhc--CCCC-------ccHHHHH----HHHHHHhCCCcc----eEEEcCCHH
Confidence 467999988875 58999999988775421 2322 2334444 777777788764 599999999
Q ss_pred -HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc
Q 023191 124 -SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG 202 (286)
Q Consensus 124 -a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~ 202 (286)
++.+++.++ |+|+++.+.|.++. ..+...|.+++.++ .+ ++..+|++++++.+++ +++|+++
T Consensus 89 ~al~~~~~~~----d~vi~~~~~~~~~~--------~~~~~~g~~~~~~~--~~-~~~~~~~~~l~~~l~~--~~~v~i~ 151 (361)
T 3ftb_A 89 EIIELSISLF----EKILIIVPSYAEYE--------INAKKHGVSVVFSY--LD-ENMCIDYEDIISKIDD--VDSVIIG 151 (361)
T ss_dssp HHHHHHHTTC----SEEEEEESCCTHHH--------HHHHHTTCEEEEEE--CC-TTSCCCHHHHHHHTTT--CSEEEEE
T ss_pred HHHHHHHHHc----CcEEEecCChHHHH--------HHHHHcCCeEEEee--cC-cccCCCHHHHHHhccC--CCEEEEe
Confidence 777666666 99999996665543 24445676666565 44 3456788999999976 8999987
Q ss_pred -CCC-CCCccC---HHHHHHHHHhcCCEEEEeccccccccc--cCCCCC-CCCcceEEEeCCCCCCC--CCCceEEE-Ee
Q 023191 203 -ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVA--AGVIPS-PFEYADVVTTTTHKSLR--GPRGAMIF-FR 271 (286)
Q Consensus 203 -~~n-~g~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~--~~~~~~-~~~~~D~v~~s~~K~l~--gp~gG~l~-~~ 271 (286)
++| +|...+ +++|+++|++||+++|+|++|+..... ...... .....++++.|++|+++ |.+.|+++ .+
T Consensus 152 ~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~g~~~~~~ 231 (361)
T 3ftb_A 152 NPNNPNGGLINKEKFIHVLKLAEEKKKTIIIDEAFIEFTGDPSSSFVGEIKNYSCLFIIRAMTKFFAMPGIRFGYGITNN 231 (361)
T ss_dssp TTBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECSSGGGTCCTTSSSGGGTTTCSSEEEEEESSSTTSCGGGCCEEEEESC
T ss_pred CCCCCCCCCCCHHHHHHHHHHhhhcCCEEEEECcchhhcCCcccchhHhcccCCCEEEEeeChhhcCCCCcceeEEEeCC
Confidence 666 666654 667888888999999999998754432 010000 00124577999999885 33448888 66
Q ss_pred cchhhhhccC
Q 023191 272 KGVKEINKQG 281 (286)
Q Consensus 272 ~~~~~~~~~~ 281 (286)
+++.+..++.
T Consensus 232 ~~~~~~~~~~ 241 (361)
T 3ftb_A 232 KEIAAKIKAK 241 (361)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHHHhh
Confidence 6777666543
No 157
>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*
Probab=99.78 E-value=1.9e-20 Score=168.98 Aligned_cols=206 Identities=9% Similarity=0.017 Sum_probs=136.2
Q ss_pred cCceecCCCCCCCHHHHHHhccccccCCCCCCCCC-cccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEe-CCChH-
Q 023191 47 KGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGA-RYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQS-LSGSP- 123 (286)
Q Consensus 47 ~~i~L~~~e~~~~~~v~~a~~~~l~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~-~sG~~- 123 (286)
+...++++..++|++|+++|.+.+.+.+..+.+.. ..+. .....++-+.+|+.+++++|++.+ .+|++ |+|+|
T Consensus 27 ~~yl~~agpt~~p~~V~~a~~~~~~~~~~n~~s~~~~~h~-~~~~~~~~~~ar~~la~ll~~~~~---~evif~t~~~T~ 102 (386)
T 3qm2_A 27 QVFNFSSGPAMLPAEVLKLAQQELCDWHGLGTSVMEISHR-GKEFIQVAEEAEQDFRDLLNIPSN---YKVLFCHGGGRG 102 (386)
T ss_dssp CCEECCSSSCCCCHHHHHHHTCC------------------------CCHHHHHHHHHHHTCCTT---EEEEEEESCTTH
T ss_pred cCccccCCCCCCCHHHHHHHHHHHHhccccCccccccCCC-CHHHHHHHHHHHHHHHHHhCCCCC---ceEEEEcCCchH
Confidence 35667788889999999999998866332111100 0011 122234455678999999999542 25887 56777
Q ss_pred HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-
Q 023191 124 SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG- 202 (286)
Q Consensus 124 a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~- 202 (286)
++.+++..++++||+|++....+-++ ++.. .+...| .++.++.+...++..+|++++++++++ +|++|.++
T Consensus 103 a~n~ai~~l~~~gd~v~~~~~~~~~~--~~~~----~a~~~G-~v~~v~~~~~~~G~~~~~~~~~~~l~~-~t~lV~~~h 174 (386)
T 3qm2_A 103 QFAGVPLNLLGDKTTADYVDAGYWAA--SAIK----EAKKYC-APQIIDAKITVDGKRAVKPMREWQLSD-NAAYLHYCP 174 (386)
T ss_dssp HHHHHHHHHCTTCCEEEEEESSHHHH--HHHH----HHTTTS-EEEEEECEEEETTEEEECCGGGCCCCT-TCSCEEECS
T ss_pred HHHHHHHhccCCCCeEEEEeCCHHHH--HHHH----HHHHhC-CeEEEecCcccCCCCCCchHHHhhcCC-CCcEEEEEC
Confidence 77778899999999988766444443 2221 122345 566666431012223677788877877 89998886
Q ss_pred CCC-CCCc-cCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCCcceEEEeCCCCCCCCCCc-eEEEEecchh
Q 023191 203 ASA-YARL-YDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVK 275 (286)
Q Consensus 203 ~~n-~g~~-~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~g-G~l~~~~~~~ 275 (286)
.+| +|.. .|+++|. +|+++++|++|++|..+.++..+ |++++|+|||+ ||.| |++++++++.
T Consensus 175 ~et~tG~~i~pi~~i~-----~g~~~~vDa~qs~g~~pidv~~~-----~~~~~s~hK~l-GP~G~g~l~v~~~~~ 239 (386)
T 3qm2_A 175 NETIDGIAIDETPDFG-----PEVVVTADFSSTILSAPLDVSRY-----GVIYAGAQKNI-GPAGLTLVIVREDLL 239 (386)
T ss_dssp EETTTTEECCCCCCCC-----TTCCEEEECTTTTTSSCCCGGGC-----SEEEEETTTTT-CCTTEEEEEEEGGGC
T ss_pred CcCCcCEecCchhhhc-----CCCEEEEEcccccCCCCCCcccc-----CEEEEeccccc-CCCccEEEEECHHHH
Confidence 333 6875 8888875 79999999999999998877654 36789999999 7999 9999998864
No 158
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=99.78 E-value=1.2e-19 Score=161.58 Aligned_cols=204 Identities=13% Similarity=0.075 Sum_probs=133.5
Q ss_pred cCceecCCCCCC--CHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChHH
Q 023191 47 KGLELIPSENFT--SVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPS 124 (286)
Q Consensus 47 ~~i~L~~~e~~~--~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~a 124 (286)
..+.+..++++. ++.+++++.+.+... .|+......+++ +++++++|.+. .+++++|+.+
T Consensus 14 ~~~~~~~~~~~~g~~p~v~~ai~~~~~~~---------~~~~~~~~~~l~----~~la~~~~~~~-----~i~~~~g~~a 75 (359)
T 3pj0_A 14 PYKLGGNGPRNVGVLTEALQNIDDNLESD---------IYGNGAVIEDFE----TKIAKILGKQS-----AVFFPSGTMA 75 (359)
T ss_dssp SEESSSSSCCBHHHHHHHTTTSCTTCBCC---------BTTBSHHHHHHH----HHHHHHHTCSE-----EEEESCHHHH
T ss_pred chhhcCCCccccCCCHHHHHHHHhhcccC---------cccCCHHHHHHH----HHHHHHhCCCc-----EEEeCCHHHH
Confidence 446667788875 788888887744321 123334444555 77888888764 3777666668
Q ss_pred HHHHHHHhcCCCCe--EEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc
Q 023191 125 NFQVYTALLKPHDR--IMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG 202 (286)
Q Consensus 125 ~~~~l~a~~~~Gd~--Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~ 202 (286)
+..++.+++.+||+ |++..+.|........ .....|..++.+ +. +++.+|+++++++ .+ ++++|+++
T Consensus 76 ~~~a~~~~~~~g~~~vvi~~~~~~~~~~~~~~-----~~~~~g~~~~~v--~~--~~~~~d~~~l~~~-~~-~~~~v~~~ 144 (359)
T 3pj0_A 76 QQIALRIWADRKENRRVAYHPLSHLEIHEQDG-----LKELQQITPLLL--GT--ANQLLTIDDIKSL-RE-PVSSVLIE 144 (359)
T ss_dssp HHHHHHHHHHHHTCCEEEECTTCHHHHSSTTH-----HHHHHCCEEEEC--SC--TTSCCCHHHHHTC-SS-CCSEEEEE
T ss_pred HHHHHHHHHhcCCCcEEEEeccceeeehhcch-----HHHhcCceEEec--CC--cCCCcCHHHHHhc-cC-CceEEEEE
Confidence 87788999999987 4444432222111000 012345544444 33 3578999999988 54 89999998
Q ss_pred -CCC-C-CCccCHH---HHHHHHHhcCCEEEEeccccccccc-cCCCCCCC-CcceEEEeCCCCCCCCCCceEEEEecch
Q 023191 203 -ASA-Y-ARLYDYE---RIRKVCNKQKAIMLADMAHISGLVA-AGVIPSPF-EYADVVTTTTHKSLRGPRGAMIFFRKGV 274 (286)
Q Consensus 203 -~~n-~-g~~~~l~---~I~~ia~~~~~~vivD~a~~~g~~~-~~~~~~~~-~~~D~v~~s~~K~l~gp~gG~l~~~~~~ 274 (286)
++| + |...+.+ +|+++|++||++||+|++|..+... .+.....+ .++|+++.|+||+|++|.||+++.++++
T Consensus 145 ~p~n~~~G~~~~~~~l~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~~~~~gg~~~~~~~l 224 (359)
T 3pj0_A 145 LPQREIGGQLPAFEELEKISEYCHEQGISLHLDGARLWEITPFYQKSAEEICALFDSVYVSFYKGIGGIAGAILAGNDDF 224 (359)
T ss_dssp SSBGGGTSBCCCHHHHHHHHHHHHHHTCEEEEEETTCGGGHHHHTCCHHHHHTTCSEEEEESSSTTCCSSCEEEEECHHH
T ss_pred ecccCCCcccCCHHHHHHHHHHHHHcCCEEEEECcchhcchhhhCCCHHHhhccCCEEEEeccccCCCcceEEEECCHHH
Confidence 555 3 5666655 5599999999999999998655421 11111111 2479999999999999977888888887
Q ss_pred hhhhc
Q 023191 275 KEINK 279 (286)
Q Consensus 275 ~~~~~ 279 (286)
.+..+
T Consensus 225 ~~~~~ 229 (359)
T 3pj0_A 225 VQEAK 229 (359)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 76554
No 159
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=99.78 E-value=1e-18 Score=158.77 Aligned_cols=158 Identities=18% Similarity=0.185 Sum_probs=119.1
Q ss_pred HHHHHHHHCCCCCCCcceeEEeCCChHHHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccC
Q 023191 97 CQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLN 176 (286)
Q Consensus 97 ~~~~~~~~~g~~~~~~~~~v~~~sG~~a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~ 176 (286)
+++.+++++|.+. .|++++|+.++.+++. ++++||+|+++++.|+++..... ..+...|.+++.++ .+
T Consensus 72 l~~~la~~~g~~~-----~i~~~sG~~ai~~~~~-l~~~gd~Vl~~~~~y~~~~~~~~----~~~~~~G~~v~~v~--~~ 139 (403)
T 3cog_A 72 LEKAVAALDGAKY-----CLAFASGLAATVTITH-LLKAGDQIICMDDVYGGTNRYFR----QVASEFGLKISFVD--CS 139 (403)
T ss_dssp HHHHHHHHHTCSE-----EEEESCHHHHHHHHHT-TSCTTCEEEEESSCCHHHHHHHH----HTGGGGTCEEEEEC--TT
T ss_pred HHHHHHHHhCCCc-----EEEECCHHHHHHHHHH-HhCCCCEEEEeCCCcchHHHHHH----HHHHHcCCEEEEEC--CC
Confidence 4477777788762 5999999777776777 89999999999988876543221 11234565554443 32
Q ss_pred CCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccCHHHHHHHHHhcC-CEEEEeccccccccccCCCCCCCC-cceEE
Q 023191 177 ESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQK-AIMLADMAHISGLVAAGVIPSPFE-YADVV 252 (286)
Q Consensus 177 ~~~~~~d~e~l~~~i~~~~tk~v~i~-~~n-~g~~~~l~~I~~ia~~~~-~~vivD~a~~~g~~~~~~~~~~~~-~~D~v 252 (286)
|++++++.+++ +|++|+++ ++| +|...|+++|+++|+++| +++|+|++|+.+.... ++. ++|++
T Consensus 140 ------d~~~l~~~i~~-~t~~v~~~~p~nptG~~~~l~~i~~la~~~g~~~livD~~~~~~~~~~-----~~~~~~div 207 (403)
T 3cog_A 140 ------KIKLLEAAITP-ETKLVWIETPTNPTQKVIDIEGCAHIVHKHGDIILVVDNTFMSPYFQR-----PLALGADIS 207 (403)
T ss_dssp ------SHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHTSSSCCEEEEECTTTCTTTCC-----TTTTTCSEE
T ss_pred ------CHHHHHHhcCc-CCeEEEEECCCCCCCeeeCHHHHHHHHHHcCCCEEEEECCCcccccCC-----ccccCCeEE
Confidence 89999999987 89999997 666 778889999999999999 9999999988765321 122 58999
Q ss_pred EeCCCCCCCCCC---ceEEEEe-cchhhhh
Q 023191 253 TTTTHKSLRGPR---GAMIFFR-KGVKEIN 278 (286)
Q Consensus 253 ~~s~~K~l~gp~---gG~l~~~-~~~~~~~ 278 (286)
+.|+||+|+||. +|+++++ +++.+.+
T Consensus 208 ~~S~sK~~~g~~~~~~G~v~~~~~~l~~~l 237 (403)
T 3cog_A 208 MYSATKYMNGHSDVVMGLVSVNCESLHNRL 237 (403)
T ss_dssp EEETTTTTTCSSCCCCEEEEECCHHHHHHH
T ss_pred EEcChhhccCCCCCeEEEEEECcHHHHHHH
Confidence 999999999886 4999996 4555443
No 160
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=99.78 E-value=1.8e-18 Score=156.47 Aligned_cols=205 Identities=16% Similarity=0.091 Sum_probs=138.6
Q ss_pred ceecCCCC-C--CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChHHH
Q 023191 49 LELIPSEN-F--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSN 125 (286)
Q Consensus 49 i~L~~~e~-~--~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~a~ 125 (286)
+++..+++ . .+|.+++++.+.+.+...........|+......+++ +.+++++|.+ .+|++++|++++
T Consensus 49 i~~~~~~~~~~~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~----~~la~~~~~~-----~~i~~~sG~~a~ 119 (401)
T 2bwn_A 49 TVWCGNDYLGMGQHPVVLAAMHEALEAVGAGSGGTRNISGTTAYHRRLE----AEIAGLHQKE-----AALVFSSAYNAN 119 (401)
T ss_dssp EECSCSCTTSGGGCHHHHHHHHHHHHHHCSCCCSBTTTBCCBHHHHHHH----HHHHHHTTCS-----EEEEESCHHHHH
T ss_pred EEeeCCCcccCCCCHHHHHHHHHHHHHcCCCCCCcCcccCChHHHHHHH----HHHHHHhCCC-----cEEEECCcHHHH
Confidence 56655554 2 4678999998887652110000111233334455555 7777888863 269999999877
Q ss_pred HHHHHHh--cCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhh---cCCcEEE
Q 023191 126 FQVYTAL--LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATL---FRPKLIV 200 (286)
Q Consensus 126 ~~~l~a~--~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~---~~tk~v~ 200 (286)
..++.++ ..|||+|+++.+.|+++..+ +...|.+++.++ .+ |++++++.++. .++++|+
T Consensus 120 ~~~~~~l~~~~~gd~Vl~~~~~~~~~~~~--------~~~~g~~~~~v~--~~------d~~~le~~l~~~~~~~~~~v~ 183 (401)
T 2bwn_A 120 DATLSTLRVLFPGLIIYSDSLNHASMIEG--------IKRNAGPKRIFR--HN------DVAHLRELIAADDPAAPKLIA 183 (401)
T ss_dssp HHHHHHHHHHSTTCEEEEETTCCHHHHHH--------HHHSCCCEEEEC--TT------CHHHHHHHHHHSCTTSCEEEE
T ss_pred HHHHHHHhcCCCCCEEEECchhhHHHHHH--------HHHcCCeEEEEc--CC------CHHHHHHHHHhhccCCceEEE
Confidence 7566655 36999999999777766542 334565555554 32 78999998872 2789998
Q ss_pred Ec-CCC-CCCccCHHHHHHHHHhcCCEEEEecccccccccc-CC--C-CCCC-CcceEEEeCCCCCCCCCCceEEEEecc
Q 023191 201 AG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAA-GV--I-PSPF-EYADVVTTTTHKSLRGPRGAMIFFRKG 273 (286)
Q Consensus 201 i~-~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~-~~--~-~~~~-~~~D~v~~s~~K~l~gp~gG~l~~~~~ 273 (286)
++ ++| +|...|+++|.++|++||+++|+|++|+.|.... +. . ...+ ...|+++.|++|+|++ .||+++++++
T Consensus 184 ~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~g~~~~~~~~~~~~~~i~~~s~sK~~~~-~GG~~~~~~~ 262 (401)
T 2bwn_A 184 FESVYSMDGDFGPIKEICDIAEEFGALTYIDEVHAVGMYGPRGAGVAERDGLMHRIDIFNGTLAKAYGV-FGGYIAASAR 262 (401)
T ss_dssp EESBCTTTCCBCCHHHHHHHHHHHTCEEEEECTTTTTTSSTTSCCHHHHHTCGGGCSEEEEESSSTTCS-CCEEEEECHH
T ss_pred EecCcCCCCCcCCHHHHHHHHHHcCCEEEEeccccccccCCCCceeeeccCccccCcEEEeechhhccC-CCCEEecCHH
Confidence 87 556 7788999999999999999999999999765421 10 0 0111 1258999999999975 4589888877
Q ss_pred hhhhhc
Q 023191 274 VKEINK 279 (286)
Q Consensus 274 ~~~~~~ 279 (286)
+.+..+
T Consensus 263 ~~~~l~ 268 (401)
T 2bwn_A 263 MVDAVR 268 (401)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 665544
No 161
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=99.65 E-value=1.3e-20 Score=170.23 Aligned_cols=213 Identities=15% Similarity=0.109 Sum_probs=147.5
Q ss_pred cCceecCCCC--CCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCC--CCCCcceeEEeCCCh
Q 023191 47 KGLELIPSEN--FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRL--DPEKWGVNVQSLSGS 122 (286)
Q Consensus 47 ~~i~L~~~e~--~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~--~~~~~~~~v~~~sG~ 122 (286)
+.++|..+++ .+++.+++++.+.+.... .+| +.. ..++++++.+++++.+|. +++ +|++++|+
T Consensus 32 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~-~~y------~~~--~~~l~~~la~~l~~~~g~~~~~~----~v~~~~g~ 98 (392)
T 3b1d_A 32 QLLPAWIADMDFEVMPEVKQAIHDYAEQLV-YGY------TYA--SDELLQAVLDWEKSEHQYSFDKE----DIVFVEGV 98 (392)
Confidence 5678877776 467889999988775411 122 221 567888888888888884 443 59999998
Q ss_pred H-HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEE
Q 023191 123 P-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA 201 (286)
Q Consensus 123 ~-a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i 201 (286)
+ ++.+++.+++++||+|+++.+.|.++.. .+...|.+++.+++.....++.+|++++++.+++.++++|++
T Consensus 99 ~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~--------~~~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~~~~~~v~~ 170 (392)
T 3b1d_A 99 VPAISIAIQAFTKEGEAVLINSPVYPPFAR--------SVRLNNRKLVSNSLKEENGLFQIDFEQLENDIVENDVKLYLL 170 (392)
Confidence 8 8887889999999999999966655432 444556555555432111136789999999987447899888
Q ss_pred c-CCC-CCCcc---CHHHHHHHHHhcCCEEEEeccccccccccCCCC--CCC----CcceEEEeCCCCCCC--CCCceEE
Q 023191 202 G-ASA-YARLY---DYERIRKVCNKQKAIMLADMAHISGLVAAGVIP--SPF----EYADVVTTTTHKSLR--GPRGAMI 268 (286)
Q Consensus 202 ~-~~n-~g~~~---~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~--~~~----~~~D~v~~s~~K~l~--gp~gG~l 268 (286)
+ ++| +|... ++++|+++|++||+++|+|++|........... ..+ ...++++.|++|+|+ |.+.|++
T Consensus 171 ~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~ 250 (392)
T 3b1d_A 171 CNPHNPGGRVWEREVLEQIGHLCQKHHVILVSDEIHQDLTLFGHEHVSFNTVSPDFKDFALVLSSATKTFNIAGTKNSYA 250 (392)
Confidence 7 555 56544 488999999999999999999875433211110 001 124588999999984 4456999
Q ss_pred EEecc-hhhhhcc
Q 023191 269 FFRKG-VKEINKQ 280 (286)
Q Consensus 269 ~~~~~-~~~~~~~ 280 (286)
+++++ +.+..++
T Consensus 251 ~~~~~~~~~~~~~ 263 (392)
T 3b1d_A 251 IIENPTLCAQFKH 263 (392)
Confidence 98654 7665553
No 162
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=99.78 E-value=7.1e-19 Score=161.06 Aligned_cols=155 Identities=16% Similarity=0.106 Sum_probs=118.6
Q ss_pred HHHHHHHHHCCCCCCCcceeEEeCCChHHHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEeccc
Q 023191 96 LCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRL 175 (286)
Q Consensus 96 ~~~~~~~~~~g~~~~~~~~~v~~~sG~~a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~ 175 (286)
++++++++++|.+. .+++++|+.++.+++.++++|||+|+++++.|.++..... ..+...|.+++.++ .
T Consensus 86 ~le~~lA~l~g~~~-----~v~~~sG~~Ai~~al~al~~~Gd~Vi~~~~~y~~~~~~~~----~~~~~~G~~~~~v~--~ 154 (430)
T 3ri6_A 86 DLEQRLKNLTGALG-----VLALGSGMAAISTAILTLARAGDSVVTTDRLFGHTLSLFQ----KTLPSFGIEVRFVD--V 154 (430)
T ss_dssp HHHHHHHHHHTCSE-----EEEESCHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHH----THHHHTTCEEEEEC--T
T ss_pred HHHHHHHHHHCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHH----HHHHHcCCEEEEeC--C
Confidence 34478888888754 4888888778887899999999999999977776543221 12234455454443 3
Q ss_pred CCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCC-cceEE
Q 023191 176 NESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFE-YADVV 252 (286)
Q Consensus 176 ~~~~~~~d~e~l~~~i~~~~tk~v~i~-~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~-~~D~v 252 (286)
+ |++++++++++ +|++|+++ ++| +|...|+++|+++|+++|+++|+|++|+.+... .+.. ++|++
T Consensus 155 ~------d~~~l~~ai~~-~t~~v~~e~p~NptG~~~dl~~i~~la~~~g~~livD~a~~~~~~~-----~~~~~g~div 222 (430)
T 3ri6_A 155 M------DSLAVEHACDE-TTKLLFLETISNPQLQVADLEALSKVVHAKGIPLVVDTTMTPPYLL-----EAKRLGVDIE 222 (430)
T ss_dssp T------CHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHTTTCCEEEECTTSCTTTC-----CGGGGTCSEE
T ss_pred C------CHHHHHHhhCC-CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcccccC-----ChHHcCCEEE
Confidence 2 89999999987 89999997 667 778899999999999999999999998876541 1222 58999
Q ss_pred EeCCCCCCCCC---CceEEEEecc
Q 023191 253 TTTTHKSLRGP---RGAMIFFRKG 273 (286)
Q Consensus 253 ~~s~~K~l~gp---~gG~l~~~~~ 273 (286)
+.|++|+|+|+ .||+++.+.+
T Consensus 223 ~~S~sK~l~g~g~~~gG~vv~~~~ 246 (430)
T 3ri6_A 223 VLSSTKFISGGGTSVGGVLIDHGL 246 (430)
T ss_dssp EEECCCEEETTEEECCEEEEECSC
T ss_pred EECCcccccCCCCceEEEEEECCh
Confidence 99999999887 5688886543
No 163
>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}
Probab=99.78 E-value=3.1e-19 Score=167.84 Aligned_cols=207 Identities=13% Similarity=0.122 Sum_probs=142.1
Q ss_pred cCceecCCCC-CCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHH-CC-CCCCCcceeEEeCCChH
Q 023191 47 KGLELIPSEN-FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEA-FR-LDPEKWGVNVQSLSGSP 123 (286)
Q Consensus 47 ~~i~L~~~e~-~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~g-~~~~~~~~~v~~~sG~~ 123 (286)
+.++|..+++ ..++.+++++.+.+... +| +.+..+..++++++.+++.+. .+ +..+. ..+|++|+|++
T Consensus 104 ~~i~l~~g~~~~~~~~~v~a~~~~~~~~---~y-----~~~~~g~~~lr~~ia~~l~~~~~~~~~~~~-~~~i~~t~G~t 174 (533)
T 3f6t_A 104 DAVNYCHTELGLNRDKVVAEWVNGAVAN---NY-----PVPDRCLVNTEKIINYFLQELSYKDANLAE-QTDLFPTEGGT 174 (533)
T ss_dssp HHHHHHHHTTCCCHHHHHHHHHHHHHTC---SC-----CSSSSCCHHHHHHHHHHHHHHHTTTCCCGG-GEEEEEEEHHH
T ss_pred hheeccCCCCCcCCcHHHHHHHHHHHhC---CC-----CCCcccHHHHHHHHHHHHHHhcCCCCCCCC-cceEEEECCHH
Confidence 3466765555 24566777666655431 22 223456678999999998776 33 33210 03699999999
Q ss_pred -HHHHHHHH-----hcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccC-CCCCCCCHHHHHHHhhhcCC
Q 023191 124 -SNFQVYTA-----LLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLN-ESTGYIDYDQLEKSATLFRP 196 (286)
Q Consensus 124 -a~~~~l~a-----~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~-~~~~~~d~e~l~~~i~~~~t 196 (286)
++..++.+ ++++||+|+++++.|.++.. .+...|..++.++++.+ .+++.+|+++|++++++ ++
T Consensus 175 ~al~~~~~~l~~~~l~~~gd~Viv~~p~~~~~~~--------~~~~~g~~~~~v~~~~~~~~~~~~d~~~l~~~l~~-~~ 245 (533)
T 3f6t_A 175 AAIVYAFHSLAENHLLKKGDKIAINEPIFTPYLR--------IPELKDYELVEVDLHSYEKNDWEIEPNEIEKLKDP-SI 245 (533)
T ss_dssp HHHHHHHHHHHHTTSSCTTCEEEEESSCCHHHHT--------SGGGGGSEEEEECCCEETTTTSEECHHHHHHHSCT-TE
T ss_pred HHHHHHHHHhhhhhccCCcCEEEEcCCCcHHHHH--------HHHHcCCeEEEEEecCCcccCCCCCHHHHHHHhCC-CC
Confidence 77778887 78999999999966655433 44566766777765431 24688999999999987 89
Q ss_pred cEEEEc-CCC-CCCccCHH---HHHHHHH-hcCCEEEEeccccccccccCCCCC-C-CCcceEEEeCCCCCCC--CCCce
Q 023191 197 KLIVAG-ASA-YARLYDYE---RIRKVCN-KQKAIMLADMAHISGLVAAGVIPS-P-FEYADVVTTTTHKSLR--GPRGA 266 (286)
Q Consensus 197 k~v~i~-~~n-~g~~~~l~---~I~~ia~-~~~~~vivD~a~~~g~~~~~~~~~-~-~~~~D~v~~s~~K~l~--gp~gG 266 (286)
++|+++ |+| +|...+.+ +|+++|+ +||+++|+|++|+. ... +.... . ..+.++++.|++|.++ |.+.|
T Consensus 246 k~v~l~~p~NPtG~~~~~~~l~~l~~la~~~~~~~li~De~y~~-~~~-~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG 323 (533)
T 3f6t_A 246 KALIVVNPTNPTSKEFDTNALNAIKQAVEKNPKLMIISDEVYGA-FVP-NFKSIYSVVPYNTMLVYSYSKLFGCTGWRLG 323 (533)
T ss_dssp EEEEEESSCTTTCBCCCHHHHHHHHHHHHHCTTCEEEEECTTGG-GST-TCCCHHHHSGGGEEEEEESHHHHTCGGGCEE
T ss_pred eEEEEeCCCCCCccccCHHHHHHHHHHHHhCCCCEEEEcCCccc-ccc-CccCHhhcCCCCEEEEecCcccCCCcccceE
Confidence 999986 777 77766655 8888888 68999999999763 222 11110 0 0135699999999875 44459
Q ss_pred EEEEecc
Q 023191 267 MIFFRKG 273 (286)
Q Consensus 267 ~l~~~~~ 273 (286)
+++++++
T Consensus 324 ~l~~~~~ 330 (533)
T 3f6t_A 324 VIALNEK 330 (533)
T ss_dssp EEEEESS
T ss_pred EEEECcH
Confidence 9999887
No 164
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=99.78 E-value=1.8e-18 Score=156.69 Aligned_cols=204 Identities=12% Similarity=0.121 Sum_probs=128.8
Q ss_pred cCceecCCCC--CCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCC-CCCCCcceeEEeCCChH
Q 023191 47 KGLELIPSEN--FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFR-LDPEKWGVNVQSLSGSP 123 (286)
Q Consensus 47 ~~i~L~~~e~--~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g-~~~~~~~~~v~~~sG~~ 123 (286)
+.++|..+++ ++++.+++++.+.+..... ......|+...+..++++++.+++. +| ++++ +|++++|++
T Consensus 34 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~--~~~~~~y~~~~g~~~lr~~la~~l~--~g~~~~~----~v~~~~G~~ 105 (400)
T 3asa_A 34 TVINLSIGDTTQPLNASVAEAFASSIARLSS--PTTCRGYGPDFGLPALRQKLSEDFY--RGFVDAK----EIFISDGAK 105 (400)
T ss_dssp CCEECSSCCCCCCCCHHHHHHHHHHHHHHTS--SSCCCCCCCTTCCHHHHHHHHHTTS--TTSSCGG----GEEEESCHH
T ss_pred ceEeccCCCCCCCCCHHHHHHHHHHHhcccc--cccccCCCCCCCCHHHHHHHHHHHH--cCCCCHH----HEEEccChH
Confidence 5689988877 4688999999887653110 0011123333455667754444432 57 5553 599999999
Q ss_pred -HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceee-eEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEE
Q 023191 124 -SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIF-FETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA 201 (286)
Q Consensus 124 -a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i 201 (286)
++.+ +..++++||+|+++++.|.++. ..+...|.. ++.++++.+ +++..|+++ + + ++++|++
T Consensus 106 ~al~~-~~~~~~~gd~Vl~~~p~y~~~~--------~~~~~~g~~~~~~~~~~~~-~~~~~~l~~----~-~-~~~~v~l 169 (400)
T 3asa_A 106 VDLFR-LLSFFGPNQTVAIQDPSYPAYL--------DIARLTGAKEIIALPCLQE-NAFFPEFPE----D-T-HIDILCL 169 (400)
T ss_dssp HHHHH-HHHHHCSSCEEEEEESCCHHHH--------HHHHHTTCSEEEEEECCGG-GTTCCCCCT----T-C-CCSEEEE
T ss_pred HHHHH-HHHHcCCCCEEEECCCCcHHHH--------HHHHHcCCcceEecccchh-cCcccChhh----c-c-CccEEEE
Confidence 6664 4566789999999996665543 233445655 555554311 234445432 1 3 7999999
Q ss_pred c-CCC-CCCccC---HHHHHHHHHhcCCEEEEeccccccccccCCCC--CCCC---cceEEEeCCCCCCC--CCCceEEE
Q 023191 202 G-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVIP--SPFE---YADVVTTTTHKSLR--GPRGAMIF 269 (286)
Q Consensus 202 ~-~~n-~g~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~--~~~~---~~D~v~~s~~K~l~--gp~gG~l~ 269 (286)
+ ++| +|...+ +++|+++|+++|+++|+|++|+.......... ..+. ..++++.|++|+|+ |.+.|+++
T Consensus 170 ~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~GlriG~~~ 249 (400)
T 3asa_A 170 CSPNNPTGTVLNKDQLRAIVHYAIEHEILILFDAAYSTFISDPSLPKSIFEIPDARFCAIEINSFSKPLGFAGIRLGWTV 249 (400)
T ss_dssp ESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTEEEEEECCGGGTTTTCCCEEEE
T ss_pred eCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEchhhhhhcCCCCCCchhhCCCCCCceEEEecchhhcCCcchheeEEe
Confidence 7 666 676665 66789999999999999999873211111000 0111 13588999999884 44459999
Q ss_pred Eecch
Q 023191 270 FRKGV 274 (286)
Q Consensus 270 ~~~~~ 274 (286)
+++++
T Consensus 250 ~~~~~ 254 (400)
T 3asa_A 250 IPQEL 254 (400)
T ss_dssp CCTTC
T ss_pred eChhh
Confidence 98877
No 165
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=99.78 E-value=1.1e-18 Score=157.71 Aligned_cols=162 Identities=15% Similarity=0.107 Sum_probs=121.5
Q ss_pred HHHHHHHHHCCCCCCCcceeEEeCCChHHHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEeccc
Q 023191 96 LCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRL 175 (286)
Q Consensus 96 ~~~~~~~~~~g~~~~~~~~~v~~~sG~~a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~ 175 (286)
.+++++++++|.+. .+++++|+.++..++.+++++||+|+++++.|+++...... .+...|.+++.++ .
T Consensus 63 ~l~~~la~~~g~~~-----~i~~~sG~~ai~~~~~~~~~~gd~vl~~~~~y~~~~~~~~~----~~~~~g~~~~~v~--~ 131 (389)
T 3acz_A 63 QFEEMVCSIEGAAG-----SAAFGSGMGAISSSTLAFLQKGDHLIAGDTLYGCTVSLFTH----WLPRFGIEVDLID--T 131 (389)
T ss_dssp HHHHHHHHHHTCSE-----EEEESSHHHHHHHHHTTTCCTTCEEEEESSCCHHHHHHHHH----HHHHTTCEEEEEC--T
T ss_pred HHHHHHHHHhCCCe-----EEEeCCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHH----HHHHcCCEEEEEC--C
Confidence 34477888888762 47778777788878888899999999999888765432210 0223455454443 2
Q ss_pred CCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCCcceEEE
Q 023191 176 NESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVT 253 (286)
Q Consensus 176 ~~~~~~~d~e~l~~~i~~~~tk~v~i~-~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~ 253 (286)
.|++++++.+++ ++++|+++ ++| +|...|+++|.++|++||+++|+|++|+.+.....+ .. ++|+++
T Consensus 132 ------~d~~~l~~~i~~-~~~~v~~~~~~nptG~~~~l~~i~~~~~~~~~~livD~~~~~~~~~~~~-~~---~~di~~ 200 (389)
T 3acz_A 132 ------SDVEKVKAAWKP-NTKMVYLESPANPTCKVSDIKGIAVVCHERGARLVVDATFTSPCFLKPL-EL---GADIAL 200 (389)
T ss_dssp ------TCHHHHHHTCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTCTTTCCGG-GT---TCSEEE
T ss_pred ------CCHHHHHHhcCC-CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCccccccCcc-cc---CCeEEE
Confidence 389999999987 89999997 666 678889999999999999999999998766431111 11 489999
Q ss_pred eCCCCCCCCCC---ceEEEEec-chhhhhc
Q 023191 254 TTTHKSLRGPR---GAMIFFRK-GVKEINK 279 (286)
Q Consensus 254 ~s~~K~l~gp~---gG~l~~~~-~~~~~~~ 279 (286)
.|+||+++||. +|++++++ ++.+.++
T Consensus 201 ~S~sK~~~~~~~~~~G~v~~~~~~~~~~l~ 230 (389)
T 3acz_A 201 HSVSKYINGHGDVIGGVSSAKTAEDIATIK 230 (389)
T ss_dssp EETTTTTTCSSCCCCEEEEESSHHHHHHHH
T ss_pred ECChhhccCCCCceeEEEEECcHHHHHHHH
Confidence 99999998875 49999998 7665443
No 166
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=99.78 E-value=1.5e-18 Score=158.05 Aligned_cols=154 Identities=14% Similarity=0.141 Sum_probs=113.3
Q ss_pred HHHHHHHHHHCCCCCCCcceeEEeCCChH-HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEec
Q 023191 95 SLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPY 173 (286)
Q Consensus 95 ~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~ 173 (286)
+++++++++++|.+. +++++|++ ++..++.+++++||+|+++++.|.++..+... .+...|.+++.++
T Consensus 59 ~~l~~~la~~~g~~~------~~~~~~gt~a~~~al~~l~~~gd~vi~~~~~~~~~~~~~~~----~~~~~g~~~~~~~- 127 (412)
T 2cb1_A 59 KALEERLKALEGALE------AVVLASGQAATFAALLALLRPGDEVVAAKGLFGQTIGLFGQ----VLSLMGVTVRYVD- 127 (412)
T ss_dssp HHHHHHHHHHHTCSE------EEEESSHHHHHHHHHHTTCCTTCEEEEETTCCHHHHHHHHH----TTTTTTCEEEEEC-
T ss_pred HHHHHHHHHHhCCCc------EEEECCHHHHHHHHHHHHhCCCCEEEEeCCCchhHHHHHHH----HHHHcCCEEEEEC-
Confidence 345577888888752 66667767 88889999999999999999888765443211 1223454444342
Q ss_pred ccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCC-cce
Q 023191 174 RLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFE-YAD 250 (286)
Q Consensus 174 ~~~~~~~~~d~e~l~~~i~~~~tk~v~i~-~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~-~~D 250 (286)
+|++++++++++ +|++|+++ ++| +|...|+++|.++|++||+++|+|++|+.+.... .++. ++|
T Consensus 128 --------~~~~~l~~~i~~-~~~~v~~~~~~n~~G~~~~l~~i~~l~~~~~~~li~D~~~~~~~~~~----~~~~~~~d 194 (412)
T 2cb1_A 128 --------PEPEAVREALSA-KTRAVFVETVANPALLVPDLEALATLAEEAGVALVVDNTFGAAGALC----RPLAWGAH 194 (412)
T ss_dssp --------SSHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECGGGTTTTSC----CGGGGTCS
T ss_pred --------CCHHHHHHHhcc-CCeEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEECCCccccccC----CccccCCe
Confidence 248999999987 89999997 666 7788899999999999999999999998762211 1112 489
Q ss_pred EEEeCCCCCCCCCCc--eEEEEec
Q 023191 251 VVTTTTHKSLRGPRG--AMIFFRK 272 (286)
Q Consensus 251 ~v~~s~~K~l~gp~g--G~l~~~~ 272 (286)
++++|+||+++||.+ |++++.+
T Consensus 195 i~~~S~~K~~~~~~~~~G~~~~~~ 218 (412)
T 2cb1_A 195 VVVESLTKWASGHGSVLGGAVLSR 218 (412)
T ss_dssp EEEEETTTTTTCSSCCCCEEEEEC
T ss_pred EEEECCcccccCCCCcEEEEEEec
Confidence 999999999988754 5555544
No 167
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=99.77 E-value=2.2e-18 Score=155.96 Aligned_cols=163 Identities=18% Similarity=0.193 Sum_probs=119.8
Q ss_pred HHHHHHHHHHHCCCCCCCcceeEEeCCChHHHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEec
Q 023191 94 ESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPY 173 (286)
Q Consensus 94 ~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~ 173 (286)
.+.+++.+++++|.+. .+++++|+.++.+++.+++++||+|+++++.|+++...... .....|..+..++
T Consensus 68 ~~~l~~~la~~~g~~~-----~~~~~sGt~A~~~al~~~~~~gd~Vi~~~~~y~~~~~~~~~----~~~~~g~~~~~v~- 137 (392)
T 3qhx_A 68 RTALEAALAAVEDAAF-----GRAFSSGMAAADCALRAMLRPGDHVVIPDDAYGGTFRLIDK----VFTGWNVEYTPVA- 137 (392)
T ss_dssp HHHHHHHHHHHTTCSE-----EEEESSHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHH----TGGGGTCEEEEEC-
T ss_pred HHHHHHHHHHHhCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEeCCCcchHHHHHHH----HHHhcCcEEEEeC-
Confidence 3345588888998763 35556665588878898999999999999888765432211 1123454444443
Q ss_pred ccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCC-cce
Q 023191 174 RLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFE-YAD 250 (286)
Q Consensus 174 ~~~~~~~~~d~e~l~~~i~~~~tk~v~i~-~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~-~~D 250 (286)
.+ |++++++++++ +|++|+++ ++| +|.+.|+++|+++|++||+++|+|++|+.+... .++. ++|
T Consensus 138 -~~------d~~~l~~~i~~-~~~~v~~~~~~nptG~~~~l~~i~~la~~~g~~li~D~~~~~~~~~-----~~~~~~~d 204 (392)
T 3qhx_A 138 -LA------DLDAVRAAIRP-TTRLIWVETPTNPLLSIADIAGIAQLGADSSAKVLVDNTFASPALQ-----QPLSLGAD 204 (392)
T ss_dssp -TT------CHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTCTTTC-----CGGGGTCS
T ss_pred -CC------CHHHHHHhhCC-CCeEEEEECCCCCCcEEecHHHHHHHHHHcCCEEEEECCCcccccC-----ChHHhCCc
Confidence 32 89999999987 89999997 666 778899999999999999999999998755321 1222 489
Q ss_pred EEEeCCCCCCCCCC---ceEEEEec-chhhhhc
Q 023191 251 VVTTTTHKSLRGPR---GAMIFFRK-GVKEINK 279 (286)
Q Consensus 251 ~v~~s~~K~l~gp~---gG~l~~~~-~~~~~~~ 279 (286)
+++.|+||+++++. +|++++++ ++.+..+
T Consensus 205 i~~~S~sK~lg~~g~~~~G~v~~~~~~~~~~l~ 237 (392)
T 3qhx_A 205 VVLHSTTKYIGGHSDVVGGALVTNDEELDQSFA 237 (392)
T ss_dssp EEEEETTTTTTCSSCCCCEEEEESCHHHHHHHH
T ss_pred EEEEcCccccCCCCCceEEEEEECcHHHHHHHH
Confidence 99999999998764 79999985 5554443
No 168
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=99.77 E-value=5.3e-18 Score=156.06 Aligned_cols=188 Identities=13% Similarity=0.078 Sum_probs=124.8
Q ss_pred CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-HHHHHHHHhcCCC
Q 023191 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLKPH 136 (286)
Q Consensus 58 ~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l~a~~~~G 136 (286)
+++.+.+++... .. .|....+..+++ +.++++++.+. +++++|++ ++.+++.++++||
T Consensus 56 ~~~~~~~a~~~~-~~----------~y~~~~~~~~l~----~~la~~~~~~~------~~~~~~gt~a~~~al~~l~~~g 114 (456)
T 2ez2_A 56 MSDKQWAGMMMG-DE----------AYAGSENFYHLE----RTVQELFGFKH------IVPTHQGRGAENLLSQLAIKPG 114 (456)
T ss_dssp CCHHHHHHHTTC-CC----------CSSSCHHHHHHH----HHHHHHHCCSE------EEEESSHHHHHHHHHHHHCCTT
T ss_pred CCHHHHHHhhcc-hh----------hcccChhHHHHH----HHHHHHhCCCc------EEEeCCcHHHHHHHHHHhCCCC
Confidence 467888887621 11 133345566666 66667777642 66666666 8888889999999
Q ss_pred CeEEeccCCC-CcccCccccccccccccceeeeEEEecccC--CC-----CCCCCHHHHHHHhhhcCC----cEEEEc-C
Q 023191 137 DRIMALDLPH-GGHLSHGYQTDTKKISAVSIFFETMPYRLN--ES-----TGYIDYDQLEKSATLFRP----KLIVAG-A 203 (286)
Q Consensus 137 d~Vl~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~--~~-----~~~~d~e~l~~~i~~~~t----k~v~i~-~ 203 (286)
| +++.+.| +++. ..+...|.+++.++++.+ ++ ++.+|+++|++++++ ++ ++|+++ +
T Consensus 115 d--i~~~~~~~~~~~--------~~~~~~G~~~~~v~~~~~~~~~~~~~~~~~~d~~~l~~~i~~-~t~~~~~~v~l~~p 183 (456)
T 2ez2_A 115 Q--YVAGNMYFTTTR--------YHQEKNGAVFVDIVRDEAHDAGLNIAFKGDIDLKKLQKLIDE-KGAENIAYICLAVT 183 (456)
T ss_dssp C--EEEESSCCHHHH--------HHHHHTTCEEEECBCGGGGCTTCCCSCTTCBCHHHHHHHHHH-HCGGGEEEEEEESS
T ss_pred C--EeccccccchhH--------HHHHHcCCEEEEecccccccccccccccCCCCHHHHHHHHHh-ccccceeEEEEecc
Confidence 9 6677555 3322 234456665655553311 11 368899999999987 55 888887 6
Q ss_pred CC--CCCccC---HHHHHHHHHhcCCEEEEecccccc---------ccccCCCCC-----CCCcceEEEeCCCCCCCCCC
Q 023191 204 SA--YARLYD---YERIRKVCNKQKAIMLADMAHISG---------LVAAGVIPS-----PFEYADVVTTTTHKSLRGPR 264 (286)
Q Consensus 204 ~n--~g~~~~---l~~I~~ia~~~~~~vivD~a~~~g---------~~~~~~~~~-----~~~~~D~v~~s~~K~l~gp~ 264 (286)
+| +|...+ +++|+++|++||+++|+|++|+.| ....+.... .....|++++|+||+++.|+
T Consensus 184 ~n~ptG~~~~~~~l~~i~~la~~~~i~li~De~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~~S~kk~~~~~~ 263 (456)
T 2ez2_A 184 VNLAGGQPVSMANMRAVRELTEAHGIKVFYDATRCVENAYFIKEQEQGFENKSIAEIVHEMFSYADGCTMSGKKDCLVNI 263 (456)
T ss_dssp BTTTTSBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHSTTCTTSCHHHHHHHHHTTCSEEEEETTTTTCCSS
T ss_pred CCCCCCccCCHHHHHHHHHHHHHcCCeEEEEccccccccccccccccccCCcchhhhhhhhcccCCEEEEeCcccCCCCc
Confidence 65 455555 999999999999999999999876 222222100 00236888888999876566
Q ss_pred ceEEEEe-cchhhh
Q 023191 265 GAMIFFR-KGVKEI 277 (286)
Q Consensus 265 gG~l~~~-~~~~~~ 277 (286)
||+++++ +++.+.
T Consensus 264 gG~~~~~~~~~~~~ 277 (456)
T 2ez2_A 264 GGFLCMNDDEMFSS 277 (456)
T ss_dssp CEEEEESCHHHHHH
T ss_pred eeEEEECCHHHHHH
Confidence 7999984 555543
No 169
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}
Probab=99.77 E-value=3.7e-19 Score=163.82 Aligned_cols=161 Identities=16% Similarity=0.163 Sum_probs=116.6
Q ss_pred HHHHHHHHHCCCCCCCcceeEEeCCChH-HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecc
Q 023191 96 LCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYR 174 (286)
Q Consensus 96 ~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~ 174 (286)
++++++++ +|.+. ++++++|++ ++.+++++++++||+|+++++.|.++.. .+...|..++.++..
T Consensus 61 ~~~~~la~-~g~~~-----~v~~~~G~t~a~~~~~~a~~~~gd~Vlv~~~~h~s~~~--------~~~~~G~~~~~v~~~ 126 (446)
T 2x3l_A 61 KSMKQVEK-HSDYD-----GYFLVNGTTSGILSVIQSFSQKKGDILMARNVHKSVLH--------ALDISQQEGHFIETH 126 (446)
T ss_dssp HHHHHHCS-CTTEE-----EEEESSHHHHHHHHHHHTTTTSSSCEEECTTCCHHHHH--------HHHHHTCCEEECEEE
T ss_pred HHHHHHHh-cCCCc-----eEEEeCCHHHHHHHHHHHhcCCCCEEEEecCccHHHHH--------HHHHcCCeEEEEeCe
Confidence 35588888 88862 599999998 8888999999999999999977776654 333566666555542
Q ss_pred cCCCC----CCCCHHHHHHHhhhcCCcEEEEcCCC-CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCC-C-
Q 023191 175 LNEST----GYIDYDQLEKSATLFRPKLIVAGASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPF-E- 247 (286)
Q Consensus 175 ~~~~~----~~~d~e~l~~~i~~~~tk~v~i~~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~-~- 247 (286)
.+ ++ +.+|++++ +.+ ++++|+++++| +|...|+++|+++|++||+++|+|++|+......+. +... .
T Consensus 127 ~~-~~~~~~~~~d~~~l---~~~-~~~~v~~~~~n~~G~~~~l~~I~~l~~~~~~~livDea~~~~~~f~~~-~~~~~~~ 200 (446)
T 2x3l_A 127 QS-PLTNHYNKVNLSRL---NND-GHKLVVLTYPNYYGETFNVEEVIKSLHQLNIPVLIDEAHGAHFGLQGF-PDSTLNY 200 (446)
T ss_dssp EC-TTTSSEEEEEC-----------CCEEEEESSCTTSCCCCHHHHHHHHHHTTCCEEEECTTCTTTTSTTS-CCCGGGG
T ss_pred ec-cccCcCCCCCHHHH---cCC-CceEEEEECCCCCeEecCHHHHHHHHHhcCCeEEEcchhhhhhccCCC-CCChHHc
Confidence 24 22 46788877 444 79999997444 788999999999999999999999998762211111 1111 1
Q ss_pred cceEEEeCCCCCCCCCCc-eEEEEecchhh
Q 023191 248 YADVVTTTTHKSLRGPRG-AMIFFRKGVKE 276 (286)
Q Consensus 248 ~~D~v~~s~~K~l~gp~g-G~l~~~~~~~~ 276 (286)
++|++++|+||+++|+.| |++++++++.+
T Consensus 201 g~Di~~~S~~K~l~~~~g~g~l~~~~~~i~ 230 (446)
T 2x3l_A 201 QADYVVQSFHKTLPALTMGSVLYIHKNAPY 230 (446)
T ss_dssp TCSEEEECHHHHSSSCTTCEEEEEETTCTT
T ss_pred CCCEEEECCccccccccccEEEEEcCCcCC
Confidence 489999999999988877 99999988654
No 170
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=99.77 E-value=2.9e-18 Score=166.91 Aligned_cols=163 Identities=18% Similarity=0.089 Sum_probs=122.4
Q ss_pred HHHHHHHHHCCCCCCCcceeEEeCCChH-HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecc
Q 023191 96 LCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYR 174 (286)
Q Consensus 96 ~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~ 174 (286)
..++.+++++|.+. .+++++|++ ++.+++.++++|||+|+++.+.|.++... +...|..++.++..
T Consensus 209 ~~ee~la~l~G~d~-----~i~~~~Gtt~a~~~~i~al~~~GD~Vlv~~~~h~s~~~~--------~~~~G~~~v~v~~~ 275 (755)
T 2vyc_A 209 ESEKYAARVFGADR-----SWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQG--------LMLTGAKPVYMVPS 275 (755)
T ss_dssp HHHHHHHHHHTCSE-----EEEESSHHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHH--------HHHHCCEEEEECCC
T ss_pred HHHHHHHHHhCCCc-----eEEECCcHHHHHHHHHHHhcCCCCEEEECCCchHHHHHH--------HHHcCCEEEEEeCC
Confidence 35588889999864 488999988 88889999999999999999888776542 34567666666533
Q ss_pred cCCCCC----CC-----CHHHHHHHhhhc-CCc--------EEEEcCCC-CCCccCHHHHHHHHHhcCCEEEEecccccc
Q 023191 175 LNESTG----YI-----DYDQLEKSATLF-RPK--------LIVAGASA-YARLYDYERIRKVCNKQKAIMLADMAHISG 235 (286)
Q Consensus 175 ~~~~~~----~~-----d~e~l~~~i~~~-~tk--------~v~i~~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g 235 (286)
. +++ .+ |+++|+++++++ ++| +++++.+| +|.+.|+++|+++|++|++++++|+||+.+
T Consensus 276 ~--~~~g~~g~i~~~~~d~e~le~~i~~~~~~k~~~~~~~klvil~~pn~~G~v~dl~~I~~ia~~~~~~livDeA~~~~ 353 (755)
T 2vyc_A 276 R--NRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTYDGVCYNAKEAQDLLEKTSDRLHFDEAWYGY 353 (755)
T ss_dssp B--CTTSCBCCCCGGGGSHHHHHHHHHHCTTTGGGTTCCCSCEEEESSCTTSEEECHHHHHHHHTTTCSEEEEECTTCTT
T ss_pred C--CccccccccCcCCCCHHHHHHHHHhCccccccccCCCeEEEEECCCCCceecCHHHHHHHHHHcCCEEEEECcCchh
Confidence 2 222 35 999999999762 344 88887446 788899999999999999999999999754
Q ss_pred ccccCC--CCCCCCc--ceE------EEeCCCCCCCCCCc-eEEEEecc
Q 023191 236 LVAAGV--IPSPFEY--ADV------VTTTTHKSLRGPRG-AMIFFRKG 273 (286)
Q Consensus 236 ~~~~~~--~~~~~~~--~D~------v~~s~~K~l~gp~g-G~l~~~~~ 273 (286)
...... ...++.+ +|+ +++|+||+++||++ |+++++++
T Consensus 354 ~~~~~~~~~~~~~~g~~aD~~~~~~iv~~S~hK~L~g~~~g~~i~~~~~ 402 (755)
T 2vyc_A 354 ARFNPIYADHYAMRGEPGDHNGPTVFATHSTHKLLNALSQASYIHVREG 402 (755)
T ss_dssp GGGCGGGTTSSSSCSCCCCCSSBEEEEEEETTTSSSCCTTCEEEEEECC
T ss_pred cccCcccCCcchhcCCcCCccCCCeEEEECccccccCcCCeeeeeecCc
Confidence 332211 1112233 565 99999999999985 88988876
No 171
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=99.77 E-value=1.2e-18 Score=168.38 Aligned_cols=166 Identities=17% Similarity=0.092 Sum_probs=122.9
Q ss_pred HHHHHHHHHCCCCCCCcceeEEeCCChH-HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecc
Q 023191 96 LCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYR 174 (286)
Q Consensus 96 ~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~ 174 (286)
++++.+++++|.+. .+++++|++ ++.++++++++|||+|+++.+.|.++... .+.+.|..++.++..
T Consensus 177 e~e~~lA~~~gae~-----~i~v~nGtt~an~~ai~al~~pGD~VLv~~~~H~S~~~~-------~~~l~Ga~~v~v~~~ 244 (730)
T 1c4k_A 177 AAEKHAARVYNADK-----TYFVLGGSSNANNTVTSALVSNGDLVLFDRNNHKSVYNS-------ALAMAGGRPVYLQTN 244 (730)
T ss_dssp HHHHHHHHHTTCSE-----EEEESSHHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHH-------HTTTTCCEEEEECEE
T ss_pred HHHHHHHHHHCCCc-----EEEECCHHHHHHHHHHHHhcCCCCEEEEcCCchHHHHHH-------HHHHCCCEEEEEeCC
Confidence 45588999999875 488999997 88889999999999999999888776542 034567666655533
Q ss_pred cCCC--CCCCCHHHH-----HHHhhhcC------C----cEEEEcCCC-CCCccCHHHHHHHHHhcCCEEEEeccccccc
Q 023191 175 LNES--TGYIDYDQL-----EKSATLFR------P----KLIVAGASA-YARLYDYERIRKVCNKQKAIMLADMAHISGL 236 (286)
Q Consensus 175 ~~~~--~~~~d~e~l-----~~~i~~~~------t----k~v~i~~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~ 236 (286)
.+.- .+.+|+++| ++++++ + + |+|+++.+| +|.+.|+++|+++|++|++++++|+||+.+.
T Consensus 245 ~~~~~i~g~id~e~L~~~~le~~i~~-~~~~~~~t~~~vklviv~~pn~~G~v~dl~~I~~la~~~g~~livDeAh~~~~ 323 (730)
T 1c4k_A 245 RNPYGFIGGIYDSDFDEKKIRELAAK-VDPERAKWKRPFRLAVIQLGTYDGTIYNAHEVVKRIGHLCDYIEFDSAWVGYE 323 (730)
T ss_dssp ECTTCCEEEECGGGSCHHHHHHHTTT-SSHHHHTCSCCBSEEEEESBCTTSEEECHHHHHHHHGGGBSEEEEECTTCCGG
T ss_pred ccccCccCCCCHHHHhhhHHHHHhhc-CCcccccccCCCeEEEEECCCCCCeecCHHHHHHHHHHcCCeEEEEccccccc
Confidence 2200 123677777 888876 3 5 889887445 7888999999999999999999999997543
Q ss_pred cccC----CCCCCC--Ccce----EEEeCCCCCCCCCCc-eEEEEecch
Q 023191 237 VAAG----VIPSPF--EYAD----VVTTTTHKSLRGPRG-AMIFFRKGV 274 (286)
Q Consensus 237 ~~~~----~~~~~~--~~~D----~v~~s~~K~l~gp~g-G~l~~~~~~ 274 (286)
.... ...... .++| ++++|+||+++|+.+ |+++++++.
T Consensus 324 ~f~~~~~g~~~l~~~~~g~D~~~~iv~~S~hK~L~g~~~gg~I~v~~~~ 372 (730)
T 1c4k_A 324 QFIPMMRNSSPLLIDDLGPEDPGIIVVQSVHKQQAGFSQTSQIHKKDSH 372 (730)
T ss_dssp GSSGGGGGGCTTSCCCCCTTSCEEEEEECHHHHSSCCTTCEEEEEECGG
T ss_pred ccCcccCCcCcccccccCCCCCCEEEEECCCCCCCCCCCEEEEEecchh
Confidence 2211 111111 1467 999999999999876 888888764
No 172
>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}
Probab=99.77 E-value=1.9e-19 Score=161.81 Aligned_cols=200 Identities=10% Similarity=-0.002 Sum_probs=137.8
Q ss_pred CCCCCCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEe-CCChH-HHHHHHH
Q 023191 53 PSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQS-LSGSP-SNFQVYT 130 (286)
Q Consensus 53 ~~e~~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~-~sG~~-a~~~~l~ 130 (286)
+...+.|++|+++|.+.+.+.+..+.+............++-+.+|+.+++++|++.+. +|++ ++|+| ++.+++.
T Consensus 19 at~~~~p~~Vl~a~~~~~~~~~~n~~s~~~~~hr~~~~~~~~~~ar~~la~ll~~~~~~---evif~t~~~T~a~n~a~~ 95 (377)
T 3e77_A 19 YFQSMLPHSVLLEIQKELLDYKGVGISVLEMSHRSSDFAKIINNTENLVRELLAVPDNY---KVIFLQGGGCGQFSAVPL 95 (377)
T ss_dssp ECSCCCCHHHHHHHHHTSSSGGGSSSCTTTCCTTSHHHHHHHHHHHHHHHHHHTCCTTE---EEEEESSHHHHHHHHHHH
T ss_pred cccCCCCHHHHHHHHHHHHhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCC---eEEEEcCchHHHHHHHHH
Confidence 34557899999999998876432221110001112345567778899999999996432 5888 56777 7777888
Q ss_pred HhcCC--CCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-C
Q 023191 131 ALLKP--HDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-Y 206 (286)
Q Consensus 131 a~~~~--Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~-~~n-~ 206 (286)
.++.+ ||+|++....+-++ ++.. .++..|..+..++ .+ .++..++++++..+++ +|++|.++ ..| +
T Consensus 96 ~l~~~~~Gd~v~~~~~g~~~~--~~~~----~a~~~G~~~~~~~--~~-~~~~~~~~~~~~~i~~-~t~lV~~~h~et~t 165 (377)
T 3e77_A 96 NLIGLKAGRCADYVVTGAWSA--KAAE----EAKKFGTINIVHP--KL-GSYTKIPDPSTWNLNP-DASYVYYCANETVH 165 (377)
T ss_dssp HHGGGSTTCEEEECCCSHHHH--HHHH----HHTTTSEEEECSC--CC-SSSCSCCCGGGCCCCT-TCSCEEEESEETTT
T ss_pred hccCCCCCCeEEEEECCHHHH--HHHH----HHHHhCCceEEec--cC-CCcCCCCChHHhccCC-CccEEEEeCccCch
Confidence 88765 99998776544443 2211 2233454333333 33 3445666777766776 89998886 333 6
Q ss_pred CCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCCcceEEEeCCCCCCCCCCc-eEEEEecchhh
Q 023191 207 ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKE 276 (286)
Q Consensus 207 g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~g-G~l~~~~~~~~ 276 (286)
|.+.|+ +|+++|+++++|++|++|..+.++..+. ++++|+|||+ ||.| |++++++++.+
T Consensus 166 G~~~pi-----i~~~~~~~~~vD~~q~~g~~~id~~~~~-----~~~~s~~K~~-gp~G~g~l~~~~~~l~ 225 (377)
T 3e77_A 166 GVEFDF-----IPDVKGAVLVCDMSSNFLSKPVDVSKFG-----VIFAGAQKNV-GSAGVTVVIVRDDLLG 225 (377)
T ss_dssp TEECSS-----CCCCTTCCEEEECTTTTTSSCCCGGGCS-----EEEEEGGGTT-SCTTCEEEEEETTSCS
T ss_pred heEchh-----hhccCCCEEEEEcccccCCCCCchhhcC-----EEEEeccccc-CCCccEEEEEcHHHHh
Confidence 888888 4788999999999999999987776543 6889999999 7999 99999988643
No 173
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=99.76 E-value=1.5e-18 Score=157.63 Aligned_cols=226 Identities=14% Similarity=0.048 Sum_probs=142.7
Q ss_pred ccccccChHHHHHHHHHHHHH--HcCceecCCCC-------CCCHHHHHHhcc-ccccCCCCCCCCCcccCCcchHHHHH
Q 023191 25 APLEVVDPEIADIIEHEKARQ--WKGLELIPSEN-------FTSVSVMQAVGS-VMTNKYSEGYPGARYYGGNEYIDMAE 94 (286)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~--~~~i~L~~~e~-------~~~~~v~~a~~~-~l~~~~~~~~~~~~~~~~~~~~~~l~ 94 (286)
+++...+++.+..+....... .+.++|..+.. ++++.+++++.+ .+......+ |+...+..+++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~d~~~~~~~~~~v~~a~~~~~~~~~~~~~------y~~~~g~~~lr 79 (412)
T 1yaa_A 6 NNIELLPPDALFGIKQRYGQDQRATKVDLGIGAYRDDNGKPWVLPSVKAAEKLIHNDSSYNHE------YLGITGLPSLT 79 (412)
T ss_dssp TTCCCCCCCTTHHHHHHHHTCCCSSCEECSSCCCBCTTSCBCCCHHHHHHHHHHHTCTTCCCC------CCCTTCCHHHH
T ss_pred ccCcccCCCcHHHHHHHHhcCCCCCeEEEeeeeeeCCCCCCCCcHHHHHHHHhhhcCcccccC------CCCCCCcHHHH
Confidence 344455554444444433221 35688887763 467999999988 775311112 33445677888
Q ss_pred HHHHHHHHHHCCC--CCCCcceeEEe--CCChH-HHHHH--HHHhcCCCCeEEeccCCCCcccCccccccccccccceee
Q 023191 95 SLCQKRALEAFRL--DPEKWGVNVQS--LSGSP-SNFQV--YTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIF 167 (286)
Q Consensus 95 ~~~~~~~~~~~g~--~~~~~~~~v~~--~sG~~-a~~~~--l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~ 167 (286)
+++.+++.+.+|. +++ +|++ |+|++ ++.++ +...++|||+|+++++.|.++. ..+...|.+
T Consensus 80 ~~ia~~~~~~~~~~~~~~----~i~~~~t~g~~~a~~~~~~~~~~~~~gd~Vl~~~p~~~~~~--------~~~~~~g~~ 147 (412)
T 1yaa_A 80 SNAAKIIFGTQSDALQED----RVISVQSLSGTGALHISAKFFSKFFPDKLVYLSKPTWANHM--------AIFENQGLK 147 (412)
T ss_dssp HHHHHHHHCTTCHHHHTT----CEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCTTHH--------HHHHTTTCC
T ss_pred HHHHHHHhcCCCCCCCcc----eEEEEeccchHhHHHHHHHHHHHhCCCCEEEEeCCCCccHH--------HHHHHcCce
Confidence 8888888665553 443 4888 99888 76655 3455689999999996665543 244456666
Q ss_pred eEEEecccCCCCCCCCHHHHHHHhhhcC-CcEEEE-c-CCC-CCCccC---HHHHHHHHHhcCCEEEEecccccccccc-
Q 023191 168 FETMPYRLNESTGYIDYDQLEKSATLFR-PKLIVA-G-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAA- 239 (286)
Q Consensus 168 ~~~v~~~~~~~~~~~d~e~l~~~i~~~~-tk~v~i-~-~~n-~g~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~~- 239 (286)
++.+++. +++++.+|++++++.+++.+ ++++++ + ++| +|...+ +++|+++|++||+++|+|++|.......
T Consensus 148 ~~~v~~~-~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~ 226 (412)
T 1yaa_A 148 TATYPYW-ANETKSLDLNGFLNAIQKAPEGSIFVLHSCAHNPTGLDPTSEQWVQIVDAIASKNHIALFDTAYQGFATGDL 226 (412)
T ss_dssp EEEEECE-ETTTTEECHHHHHHHHHHSCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTSSSCH
T ss_pred EEEEeee-cCCCCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCcc
Confidence 6666541 32467899999999997632 244444 6 666 676654 6688999999999999999975321110
Q ss_pred --CCCCC-CC---Cc---ceEEEeCCCCCCCC--CCceEEE
Q 023191 240 --GVIPS-PF---EY---ADVVTTTTHKSLRG--PRGAMIF 269 (286)
Q Consensus 240 --~~~~~-~~---~~---~D~v~~s~~K~l~g--p~gG~l~ 269 (286)
..... .+ .. .++++.|++|+|+. .+.|+++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~GlriG~~~ 267 (412)
T 1yaa_A 227 DKDAYAVRLGVEKLSTVSPVFVCQSFAKNAGMYGERVGCFH 267 (412)
T ss_dssp HHHTHHHHHHHHHTTTTCCEEEEEECTTTSCCGGGCEEEEE
T ss_pred cchhHHHHHHHhcCCCCcceEEEeccCCCCCCcCCcceEEE
Confidence 00000 00 11 35779999998853 2239888
No 174
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}
Probab=99.76 E-value=4e-18 Score=154.70 Aligned_cols=234 Identities=12% Similarity=0.048 Sum_probs=134.3
Q ss_pred CCchhhccccccccChH-HHHHHHHHHHHH-HcCceecCCCC---CCCHHHHHHhccccccCCCCCCCCCcccCCcchHH
Q 023191 17 VTWPKQLNAPLEVVDPE-IADIIEHEKARQ-WKGLELIPSEN---FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYID 91 (286)
Q Consensus 17 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~i~L~~~e~---~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~ 91 (286)
+++.-.|..++...+++ ++..+....+.. .+.|+|..+++ ..++.+.+++.++... . ...|+...+..
T Consensus 10 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~l~~g~~~d~~~~~~v~~a~~~a~~~-~------~~~y~~~~g~~ 82 (409)
T 4eu1_A 10 GTLEAQTQGPGSMGKPDPILGLGQDFRMDPAKRKVNLSIGVYRDDADQPFVLECVKQATLG-T------NMDYAPVTGIA 82 (409)
T ss_dssp -----------------CHHHHHHHHHHCCCSSCEECCCSSCCCTTSCCCCCHHHHTCCCC-S------CCCCCCTTCCH
T ss_pred cchhhhHhhcCCCCCCChHHHHHHHHhhCCCcCceeeeeeEEECCCCCEeecHHHHhcCcc-c------cccCCCCCCcH
Confidence 45555556677777776 566555543322 36799988874 3456677777766322 1 11234445667
Q ss_pred HHHHHHHHHHHHHCCCC-----CCCcceeEE--eCCChH-HHHH---HHHHhcCCCCeEEeccCCCCcccCccccccccc
Q 023191 92 MAESLCQKRALEAFRLD-----PEKWGVNVQ--SLSGSP-SNFQ---VYTALLKPHDRIMALDLPHGGHLSHGYQTDTKK 160 (286)
Q Consensus 92 ~l~~~~~~~~~~~~g~~-----~~~~~~~v~--~~sG~~-a~~~---~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~ 160 (286)
++++++.+++. |.+ ++ +|. .++|++ ++.+ ++.+++++||+|++++|.|.++ ...
T Consensus 83 ~lr~~ia~~~~---~~~~~~~~~~----~i~~~~~~~g~ga~~~~~~~~~~~~~~gd~Vlv~~p~y~~~--------~~~ 147 (409)
T 4eu1_A 83 SFVEEAQKLCF---GPTCAALRDG----RIASCQTLGGTGALRIGGDLLNRFVANCNRIYGPDVGYPNH--------ESI 147 (409)
T ss_dssp HHHHHHHHHHH---CSSCHHHHTT----CEEEEEESHHHHHHHHHHHHGGGTSSSCCEEEEESSCCTHH--------HHH
T ss_pred HHHHHHHHHHc---CCCchhhccC----ceeeeecccchHHHHHHHHHHHHhcCCCCEEEEeCCCcHhH--------HHH
Confidence 88877777663 443 33 353 366666 5443 3456679999999999555444 335
Q ss_pred cccceeeeEEEecccCCCCCCCCHHHHHHHhhhc--CCcEEEEc-CCC-CCCccC---HHHHHHHHHhcCCEEEEecccc
Q 023191 161 ISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF--RPKLIVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHI 233 (286)
Q Consensus 161 ~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~--~tk~v~i~-~~n-~g~~~~---l~~I~~ia~~~~~~vivD~a~~ 233 (286)
+...|.+++.+++. +.+++.+|++++++.+++. ++++++++ |+| +|...+ +++|+++|++||+++|+|++|.
T Consensus 148 ~~~~g~~~~~~~~~-~~~~~~~d~~~l~~~l~~~~~~~~~i~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~ 226 (409)
T 4eu1_A 148 FAKAGMELTPYSYY-DPATKGLNLAGMLECLDKAPEGSVILVHACAHNPTGVDPTHDDWRQVCDVIKRRNHIPFVDMAYQ 226 (409)
T ss_dssp HHHTTCEEEEECCE-ETTTTEECHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCT
T ss_pred HHHcCCeEEEEEee-cCcCCcCcHHHHHHHHHhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEecccc
Confidence 55677666666543 2256789999999999741 45566666 666 776666 5569999999999999999966
Q ss_pred cccccc------CCCCC-CCCcceEEEeCCCCCCCCC--CceEE--EE-ecc
Q 023191 234 SGLVAA------GVIPS-PFEYADVVTTTTHKSLRGP--RGAMI--FF-RKG 273 (286)
Q Consensus 234 ~g~~~~------~~~~~-~~~~~D~v~~s~~K~l~gp--~gG~l--~~-~~~ 273 (286)
...... ..... ......+++.|++|+|+.| +.|++ ++ +++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~riG~~~~v~~~~~ 278 (409)
T 4eu1_A 227 GFATGQLDYDAFVPRHLVDMVPNLIVAQSFSKNFGLYGHRCGALHISTASAE 278 (409)
T ss_dssp TTTTSCHHHHTHHHHHHHTTSSCCEEEEECTTTSSCGGGCCEEEEEECSSHH
T ss_pred ccccCCcccchHHHHHHHhhCCcEEEEecCcccccCccCCceEEEEEeCCHH
Confidence 432211 00000 0011337799999988533 44886 44 444
No 175
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.76 E-value=2.8e-18 Score=155.43 Aligned_cols=161 Identities=14% Similarity=0.102 Sum_probs=119.1
Q ss_pred HHHHHHHHHHCCCCCCCcceeEEeCCChHHHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecc
Q 023191 95 SLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYR 174 (286)
Q Consensus 95 ~~~~~~~~~~~g~~~~~~~~~v~~~sG~~a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~ 174 (286)
+.+++.+++++|.+. .+++++|+.++.+++. ++++||+|+++.+.|++...... ..+...|.+++.++
T Consensus 58 ~~lr~~la~~~g~~~-----~i~~~sGt~a~~~al~-~~~~gd~Vi~~~~~y~~~~~~~~----~~~~~~G~~v~~v~-- 125 (393)
T 1n8p_A 58 ENLERAVAALENAQY-----GLAFSSGSATTATILQ-SLPQGSHAVSIGDVYGGTHRYFT----KVANAHGVETSFTN-- 125 (393)
T ss_dssp HHHHHHHHHHTTCSE-----EEEESCHHHHHHHHHH-TSCSSCEEEEESSCCHHHHHHHH----HTSTTTCSCCEEES--
T ss_pred HHHHHHHHHHhCCCc-----EEEECChHHHHHHHHH-HcCCCCEEEEeCCCchHHHHHHH----HHHHHcCcEEEEeC--
Confidence 345588888898762 5888888668877888 89999999999987775432210 11223455555554
Q ss_pred cCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccCHHHHHHHHHhc----CCEEEEeccccccccccCCCCCCCCc
Q 023191 175 LNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQ----KAIMLADMAHISGLVAAGVIPSPFEY 248 (286)
Q Consensus 175 ~~~~~~~~d~e~l~~~i~~~~tk~v~i~-~~n-~g~~~~l~~I~~ia~~~----~~~vivD~a~~~g~~~~~~~~~~~~~ 248 (286)
.+ | +++++++++ +|++|+++ ++| +|.+.|+++|.++|+++ |+++|+|++|+.+... +.... +
T Consensus 126 ~~------d-~~l~~~i~~-~t~lv~~~~~~nptG~~~~l~~i~~la~~~~~~~~~~livD~a~~~~~~~-~~~~~---~ 193 (393)
T 1n8p_A 126 DL------L-NDLPQLIKE-NTKLVWIETPTNPTLKVTDIQKVADLIKKHAAGQDVILVVDNTFLSPYIS-NPLNF---G 193 (393)
T ss_dssp SH------H-HHHHHHSCS-SEEEEEECSSCTTTCCCCCHHHHHHHHHHHTTTTTCEEEEECTTTHHHHC-CGGGG---T
T ss_pred CC------h-HHHHHhccc-CceEEEEECCCCCcceecCHHHHHHHHHHhCCCCCCEEEEeCCccccccC-CHHHc---C
Confidence 22 7 899999987 89999997 666 77888999999999999 9999999999877653 22112 4
Q ss_pred ceEEEeCCCCCCCCCC---ceEEEEe-cchhhhhc
Q 023191 249 ADVVTTTTHKSLRGPR---GAMIFFR-KGVKEINK 279 (286)
Q Consensus 249 ~D~v~~s~~K~l~gp~---gG~l~~~-~~~~~~~~ 279 (286)
+|++++|+||+++++. ||+++++ +++.+.++
T Consensus 194 ~di~~~S~sK~~g~~G~rigG~~~~~~~~~~~~l~ 228 (393)
T 1n8p_A 194 ADIVVHSATKYINGHSDVVLGVLATNNKPLYERLQ 228 (393)
T ss_dssp CSEEEEETTTTTTCSSCCCCEEEEESCHHHHHHHH
T ss_pred CeEEEEECcccccCCCCceeEEEEeCCHHHHHHHH
Confidence 9999999999887654 3999986 45555443
No 176
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.76 E-value=3.8e-18 Score=155.85 Aligned_cols=154 Identities=16% Similarity=0.178 Sum_probs=114.9
Q ss_pred HHHHHHHHHCCCCCCCcceeEEeCCChHHHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEeccc
Q 023191 96 LCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRL 175 (286)
Q Consensus 96 ~~~~~~~~~~g~~~~~~~~~v~~~sG~~a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~ 175 (286)
.+++.+++++|.+. .+++++|+.++..++.+++++||+|+++.+.|.++..++... ....|.+++.++ +.
T Consensus 62 ~l~~~la~~~g~~~-----~v~~~sGt~A~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~----~~~~g~~~~~~~-~~ 131 (421)
T 2ctz_A 62 VLEKRLAALEGGKA-----ALATASGHAAQFLALTTLAQAGDNIVSTPNLYGGTFNQFKVT----LKRLGIEVRFTS-RE 131 (421)
T ss_dssp HHHHHHHHHHTCSE-----EEEESSHHHHHHHHHHHHCCTTCEEEECSCCCHHHHHHHHTH----HHHTTCEEEECC-TT
T ss_pred HHHHHHHHHhCCCc-----eEEecCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHH----HHHcCCEEEEEC-CC
Confidence 35577888888763 488888866888788888999999999998888765443210 123454443330 22
Q ss_pred CCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccCHHHHHHHHHhcCCEEEEeccc-cccccccCCCCCCCC-cceE
Q 023191 176 NESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAH-ISGLVAAGVIPSPFE-YADV 251 (286)
Q Consensus 176 ~~~~~~~d~e~l~~~i~~~~tk~v~i~-~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~-~~g~~~~~~~~~~~~-~~D~ 251 (286)
+ |++++++++++ +|++|+++ ++| +|.+.|+++|.++|++||+++|+|++| +.|... . ++. ++|+
T Consensus 132 ~------d~~~l~~~i~~-~~~~v~~~~~~n~~G~~~~l~~i~~~a~~~g~~livD~~~~~~g~~~-~----~~~~~~Di 199 (421)
T 2ctz_A 132 E------RPEEFLALTDE-KTRAWWVESIGNPALNIPDLEALAQAAREKGVALIVDNTFGMGGYLL-R----PLAWGAAL 199 (421)
T ss_dssp C------CHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECGGGGGGTSC-C----GGGGTCSE
T ss_pred C------CHHHHHHhhcc-CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCcccccccC-C----ccccCCeE
Confidence 2 89999999987 89999997 666 778899999999999999999999999 777421 1 122 4899
Q ss_pred EEeCCCCCCCCCCc--eEEEEe
Q 023191 252 VTTTTHKSLRGPRG--AMIFFR 271 (286)
Q Consensus 252 v~~s~~K~l~gp~g--G~l~~~ 271 (286)
+++|+||+|+||.+ |++++.
T Consensus 200 ~~~s~~K~l~~~g~~~G~~~~~ 221 (421)
T 2ctz_A 200 VTHSLTKWVGGHGAVIAGAIVD 221 (421)
T ss_dssp EEEETTTTTTCSSCCCCEEEEE
T ss_pred EEECCcccccCCCCcEEEEEEe
Confidence 99999999988653 544443
No 177
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=99.76 E-value=9e-18 Score=152.35 Aligned_cols=233 Identities=9% Similarity=-0.048 Sum_probs=149.5
Q ss_pred ccccccccChHHHHHHHHHHHHH--HcCceecCCCC-------CCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHH
Q 023191 23 LNAPLEVVDPEIADIIEHEKARQ--WKGLELIPSEN-------FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMA 93 (286)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~--~~~i~L~~~e~-------~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l 93 (286)
+.+++...+++.+..+....... .+.++|..+.+ ++++.+.+++.+.+.+.. ....|+...+..++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~-----~~~~y~~~~g~~~l 79 (412)
T 1ajs_A 5 VFAEVPQAQPVLVFKLIADFREDPDPRKVNLGVGAYRTDDCQPWVLPVVRKVEQRIANNSS-----LNHEYLPILGLAEF 79 (412)
T ss_dssp TTTTCCCCCCCHHHHHHHHHHTCCCTTCEECCSCCCCCTTSCCCCCHHHHHHHHHHHTCTT-----CCCCCCCTTCCHHH
T ss_pred hhhhCcccCCchHHHHHHHHhhcCCCCceeeccceecCCCCCccccHHHHHHHHHhhhChh-----hccCCCCCCCCHHH
Confidence 34456666666666665544321 35789988763 356899999987762210 01123344566788
Q ss_pred HHHHHHHHHHHCCC--CCCCcceeEEe--CCChH-HHHHHH--HHhcCCC-----CeEEeccCCCCcccCcccccccccc
Q 023191 94 ESLCQKRALEAFRL--DPEKWGVNVQS--LSGSP-SNFQVY--TALLKPH-----DRIMALDLPHGGHLSHGYQTDTKKI 161 (286)
Q Consensus 94 ~~~~~~~~~~~~g~--~~~~~~~~v~~--~sG~~-a~~~~l--~a~~~~G-----d~Vl~~~~~~~~~~~~~~~~~~~~~ 161 (286)
++++.+++...+|. +++ +|++ |+|++ ++.+++ .+++++| |+|+++.+.|.++. ..+
T Consensus 80 r~~la~~~~~~~~~~~~~~----~v~~~~t~gg~~a~~~~~~~~~~~~~g~~~~~d~Vl~~~p~y~~~~--------~~~ 147 (412)
T 1ajs_A 80 RTCASRLALGDDSPALQEK----RVGGVQSLGGTGALRIGAEFLARWYNGTNNKDTPVYVSSPTWENHN--------GVF 147 (412)
T ss_dssp HHHHHHHHHCTTCHHHHTT----CEEEEEEEHHHHHHHHHHHHHHHHSSSSSCCCSCEEEEESCCTHHH--------HHH
T ss_pred HHHHHHHHhcCCCCccCCC----cEEEEECCCcHHHHHHHHHHHHHhCcCcCCCCCeEEEcCCCcHHHH--------HHH
Confidence 87777777554443 443 4888 99988 777664 3557899 99999996665543 244
Q ss_pred ccceee-eEEEecccCCCCCCCCHHHHHHHhhhc--CCcEEEEc-CCC-CCCccC---HHHHHHHHHhcCCEEEEecccc
Q 023191 162 SAVSIF-FETMPYRLNESTGYIDYDQLEKSATLF--RPKLIVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHI 233 (286)
Q Consensus 162 ~~~g~~-~~~v~~~~~~~~~~~d~e~l~~~i~~~--~tk~v~i~-~~n-~g~~~~---l~~I~~ia~~~~~~vivD~a~~ 233 (286)
...|.+ ++.+++..+ +++.+|++++++.+++. ++++++++ ++| +|...+ +++|+++|++||+++|+|++|.
T Consensus 148 ~~~g~~~~~~~~~~~~-~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~y~ 226 (412)
T 1ajs_A 148 TTAGFKDIRSYRYWDT-EKRGLDLQGFLSDLENAPEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQ 226 (412)
T ss_dssp HHTTCSCEEEEECEET-TTTEECHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCT
T ss_pred HHcCCceeEEEeeecC-CCCccCHHHHHHHHHhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcccc
Confidence 556766 666654322 46789999999998753 56677777 666 666544 6689999999999999999965
Q ss_pred cccccc---C---CCCC-CCCcceEEEeCCCCCCCCC--CceEEEE---ecc
Q 023191 234 SGLVAA---G---VIPS-PFEYADVVTTTTHKSLRGP--RGAMIFF---RKG 273 (286)
Q Consensus 234 ~g~~~~---~---~~~~-~~~~~D~v~~s~~K~l~gp--~gG~l~~---~~~ 273 (286)
...... . .... .....++++.|+||.++.+ +.|++++ +++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~~ 278 (412)
T 1ajs_A 227 GFASGNLEKDAWAIRYFVSEGFELFCAQSFSKNFGLYNERVGNLTVVAKEPD 278 (412)
T ss_dssp TTTTSCHHHHTHHHHHHHHTTCCEEEEEECTTTSCCGGGCEEEEEEECSSHH
T ss_pred cccCCcccccchHHHHHhccCCcEEEEEecccccCCCCcceEEEEEecCCHH
Confidence 221110 0 0000 0001348899999988542 2399998 655
No 178
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=99.76 E-value=5.6e-18 Score=155.29 Aligned_cols=189 Identities=17% Similarity=0.225 Sum_probs=135.0
Q ss_pred CCCCCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChHHHHHHHHHh-
Q 023191 54 SENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTAL- 132 (286)
Q Consensus 54 ~e~~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~a~~~~l~a~- 132 (286)
+.+.+++++++++.+.+...+ |.......+++ +.+++++|.+. .|++++|+.++.+++.++
T Consensus 37 ~~~~~~~~~~~a~~~~~~~~~---------~~~~~~~~~l~----~~la~~~g~~~-----~i~~~sGt~a~~~al~~l~ 98 (437)
T 3bb8_A 37 SGKVIGTKELQLMVEASLDGW---------LTTGRFNDAFE----KKLGEYLGVPY-----VLTTTSGSSANLLALTALT 98 (437)
T ss_dssp CCCCCCHHHHHHHHHHHHHCC---------CBSCHHHHHHH----HHHHHHHTCSE-----EEEESCHHHHHHHHHHHTT
T ss_pred CCCCCCHHHHHHHHHHHHcCC---------cCCChHHHHHH----HHHHHHHCCCc-----EEEeCCHHHHHHHHHHHhh
Confidence 455678899999988875421 11223444455 77777888762 466666666787788888
Q ss_pred --------cCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEcCC
Q 023191 133 --------LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGAS 204 (286)
Q Consensus 133 --------~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~~~ 204 (286)
+++||+|+++.+.|.++..+ +...|.+++.++ ++++++.+|++++++++++ +|++|+++.
T Consensus 99 ~~~~~~~~~~~gd~Vi~~~~~~~~~~~~--------~~~~g~~~~~v~--~~~~~~~~d~~~l~~~i~~-~~~~v~~~~- 166 (437)
T 3bb8_A 99 SPKLGVRALKPGDEVITVAAGFPTTVNP--------TIQNGLIPVFVD--VDIPTYNVNASLIEAAVSD-KTKAIMIAH- 166 (437)
T ss_dssp CGGGGGGSCCTTCEEEECSSSCHHHHHH--------HHHTTCEEEECC--EETTTTEECGGGHHHHCCT-TEEEEEEEC-
T ss_pred hcccccccCCCcCEEEECCCCcHHHHHH--------HHHcCCEEEEEe--ccCccCCcCHHHHHHhcCC-CCeEEEEeC-
Confidence 89999999999777776543 334565555554 4434688999999999987 899998862
Q ss_pred CCCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCCcceEEEeCC--CCCCCCCCceEEEEecch
Q 023191 205 AYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTT--HKSLRGPRGAMIFFRKGV 274 (286)
Q Consensus 205 n~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~--~K~l~gp~gG~l~~~~~~ 274 (286)
+.|...++++|.++|+++|+++|+|++|+.|... +..... ...|+++.|+ .|.++|++||+++++++.
T Consensus 167 ~~g~~~~~~~i~~l~~~~~~~li~D~a~~~g~~~-~~~~~~-~~~d~~~~s~~~~k~l~~g~gg~~~~~~~~ 236 (437)
T 3bb8_A 167 TLGNLFDLAEVRRVADKYNLWLIEDCCDALGSTY-DGKMAG-TFGDIGTVSFYPAKHITMGEGGAVFTQSAE 236 (437)
T ss_dssp GGGCCCCHHHHHHHHHHHTCEEEEECTTCTTCEE-TTEETT-SSSSEEEEECSTTSSSCCSSCEEEEESCHH
T ss_pred CCCChhcHHHHHHHHHHcCCEEEEECccccCceE-CCeecc-cccCEEEEECcCCcCCCCCCeEEEEeCCHH
Confidence 3445589999999999999999999999988665 221111 1268877664 344777888999998653
No 179
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=99.76 E-value=1.9e-18 Score=153.80 Aligned_cols=206 Identities=13% Similarity=0.092 Sum_probs=132.5
Q ss_pred CceecCCCCCCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChHHHHH
Q 023191 48 GLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQ 127 (286)
Q Consensus 48 ~i~L~~~e~~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~a~~~ 127 (286)
.-.|..+.++..+++++++.+.+.. ..+...|+......+++ +++++++|.+. .+++++|+.++..
T Consensus 12 ~~~l~~~~~p~~~~~~~~~~~~~~~-----~~~~~~y~~~~~~~~l~----~~la~~~~~~~-----~i~~~~G~~a~~~ 77 (357)
T 3lws_A 12 TTGQISGHGKRNVGVLKTAFAAVAD-----EMASDQYGTGAIIEPFE----QKFADVLGMDD-----AVFFPSGTMAQQV 77 (357)
T ss_dssp CSEESSBSSCCBHHHHHHHHTTSCT-----TCBCEETTEETTHHHHH----HHHHHHHTCSE-----EEEESCHHHHHHH
T ss_pred hcccccCCCCCCHHHHHHHHHHhhc-----ccCcccccCChHHHHHH----HHHHHHhCCCc-----EEEecCcHHHHHH
Confidence 3446667777777776666543211 11122345445566666 67777788753 4777777767777
Q ss_pred HHHHhcCCCC--eEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CC
Q 023191 128 VYTALLKPHD--RIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-AS 204 (286)
Q Consensus 128 ~l~a~~~~Gd--~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~-~~ 204 (286)
++.+++.+|| .|++..+.|........ .....|..+ ++++. +++.+|+++++++ . ++++|+++ ++
T Consensus 78 al~~~~~~gd~~~vi~~~~~~~~~~~~~~-----~~~~~g~~~--~~v~~--~~~~~d~~~l~~~--~-~~~~v~~~~p~ 145 (357)
T 3lws_A 78 ALRIWSDETDNRTVAYHPLCHLEIHEQDG-----LKELHPIET--ILVGA--ADRLMTLDEIKAL--P-DIACLLLELPQ 145 (357)
T ss_dssp HHHHHHHHHTCCEEEECTTCHHHHSSTTH-----HHHHSSCEE--EECSC--TTSCCCHHHHHTC--C-SCSEEEEESSB
T ss_pred HHHHHhhcCCCcEEEecccceeeeeccch-----hhhccCcEE--EEecC--CCCCcCHHHHhcC--c-CcceEEEEccc
Confidence 8899999998 56665543333221100 122345444 44332 4568999999987 3 58999998 55
Q ss_pred C-C-CCccC---HHHHHHHHHhcCCEEEEeccccccccc-cCCCCCCC-CcceEEEeCCCCCCCCCCceEEEEecchhhh
Q 023191 205 A-Y-ARLYD---YERIRKVCNKQKAIMLADMAHISGLVA-AGVIPSPF-EYADVVTTTTHKSLRGPRGAMIFFRKGVKEI 277 (286)
Q Consensus 205 n-~-g~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~-~~~~~~~~-~~~D~v~~s~~K~l~gp~gG~l~~~~~~~~~ 277 (286)
| + |...+ +++|+++|++||++||+|++|..+... .+.....+ ..+|+++.|+||+|+||.||+++.++++.+.
T Consensus 146 np~~G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~~~~~gg~~~~~~~~~~~ 225 (357)
T 3lws_A 146 REIGGVAPAFSELETISRYCRERGIRLHLDGARLFEMLPYYEKTAAEIAGLFDSIYISFYKGLGGIAGAILAGPAAFCQT 225 (357)
T ss_dssp GGGTSBCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCHHHHHTTSSEEEEESSSTTCCSSCEEEEECHHHHHH
T ss_pred ccCCceeCCHHHHHHHHHHHHHcCCEEEEECchhhhhhhhcCCChHHHHhcCCEEEEeccccCCCCceEEEEcCHHHHHH
Confidence 5 4 65554 889999999999999999998632211 11110001 2378899999999999999999998877655
Q ss_pred hc
Q 023191 278 NK 279 (286)
Q Consensus 278 ~~ 279 (286)
.+
T Consensus 226 ~~ 227 (357)
T 3lws_A 226 AR 227 (357)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 180
>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*
Probab=99.76 E-value=1.1e-18 Score=164.42 Aligned_cols=228 Identities=14% Similarity=0.099 Sum_probs=144.9
Q ss_pred cccccCh--HHHHHHHHHHHHHH---------cCceecCCCCC-CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHH
Q 023191 26 PLEVVDP--EIADIIEHEKARQW---------KGLELIPSENF-TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMA 93 (286)
Q Consensus 26 ~~~~~~~--~~~~~~~~~~~~~~---------~~i~L~~~e~~-~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l 93 (286)
.+..+++ +++..+.+...... +.++|..+++. +++.+++++.+.+.. .+|+ ...+..++
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~l~~g~~~~~~~~~~~al~~~~~~---~~Y~------~~~g~~~l 143 (546)
T 2zy4_A 73 GVGGLAKIDGIEGRFERYIAENRDQEGVRFLGKSLSYVRDQLGLDPAAFLHEMVDGILG---CNYP------VPPRMLNI 143 (546)
T ss_dssp CEEECCCSTTHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHT---CSCC------SSSSCCHH
T ss_pred hhccCCccccchhHHHHHHHhcCCCCcchhHHhhhecccCCCCCCChHHHHHHHHhhhc---CCCC------CCcCCHHH
Confidence 4445554 66776666544331 25677666663 456677777665532 1233 23334455
Q ss_pred HHH-HHHHHHHHCCC--CC-CCcceeEEeCCChH-HHHHHHHH-----hcCCCCeEEeccCCCCcccCcccccccccccc
Q 023191 94 ESL-CQKRALEAFRL--DP-EKWGVNVQSLSGSP-SNFQVYTA-----LLKPHDRIMALDLPHGGHLSHGYQTDTKKISA 163 (286)
Q Consensus 94 ~~~-~~~~~~~~~g~--~~-~~~~~~v~~~sG~~-a~~~~l~a-----~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~ 163 (286)
+++ ++.++.+.++. +. +. .+|++|+|++ ++..++.+ +++|||.|++++|.|+++ ...+.+
T Consensus 144 r~~ia~~~~~~~~~~~~~~~~~--~~I~~t~G~~eal~~~~~~l~~~~l~~~Gd~Vlv~~P~y~~~--------~~~~~~ 213 (546)
T 2zy4_A 144 SEKIVRQYIIREMGADAIPSES--VNLFAVEGGTAAMAYIFESLKLNGLLKAGDKVAIGMPVFTPY--------IEIPEL 213 (546)
T ss_dssp HHHHHHHHHHHHTTCTTSCGGG--EEEEEEEHHHHHHHHHHHHHHHTTSSCTTCEEEEEESCCHHH--------HHHHHS
T ss_pred HHHHHHHHHHHhccCCCCCCCc--ceEEEECCHHHHHHHHHHHhhhhhcCCCCCEEEEeCCCCccH--------HHHHHH
Confidence 555 44555665543 11 11 3699999999 77767776 579999999999555444 323223
Q ss_pred c--eeeeEEEecccCC-CCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccC---HHHHHHHH--HhcCCEEEEecccc
Q 023191 164 V--SIFFETMPYRLNE-STGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYD---YERIRKVC--NKQKAIMLADMAHI 233 (286)
Q Consensus 164 ~--g~~~~~v~~~~~~-~~~~~d~e~l~~~i~~~~tk~v~i~-~~n-~g~~~~---l~~I~~ia--~~~~~~vivD~a~~ 233 (286)
. |.+++.++ .++ +++.+|+++|++.+++ ++++|+++ |+| +|...+ +++|+++| +++|++||+|++|+
T Consensus 214 ~~~g~~~~~v~--~~~~~~~~~d~~~l~~~~~~-~~k~v~l~~p~NPtG~~~~~~~l~~l~~~a~~~~~~~~ii~De~y~ 290 (546)
T 2zy4_A 214 AQYALEEVAIN--ADPSLNWQYPDSELDKLKDP-AIKIFFCVNPSNPPSVKMDQRSLERVRNIVAEHRPDLMILTDDVYG 290 (546)
T ss_dssp TTSCCEEEEEE--CBGGGTTBCCHHHHGGGGST-TEEEEEEESSCSSSCBCCCHHHHHHHHHHHHHTCTTCEEEEECTTG
T ss_pred cCCCcEEEEEe--cCcccCCCCCHHHHHHhhCC-CCeEEEEECCCCCCCccCCHHHHHHHHHHHHhccCCcEEEEeCcch
Confidence 2 34444444 432 3578999999988765 89999987 666 676655 66788888 78999999999976
Q ss_pred ccccccCCCCCCC---CcceEEEeCCCCCCC--CCCceEEEEecc-hhhhh
Q 023191 234 SGLVAAGVIPSPF---EYADVVTTTTHKSLR--GPRGAMIFFRKG-VKEIN 278 (286)
Q Consensus 234 ~g~~~~~~~~~~~---~~~D~v~~s~~K~l~--gp~gG~l~~~~~-~~~~~ 278 (286)
.... + ....+ .+.++++.|++|+++ |.+.|+++++++ +.+..
T Consensus 291 ~~~~--~-~~s~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~~l~~~l 338 (546)
T 2zy4_A 291 TFAD--D-FQSLFAICPENTLLVYSFSKYFGATGWRLGVVAAHQQNVFDLA 338 (546)
T ss_dssp GGST--T-CCCHHHHCGGGEEEEEESTTTTTCGGGCEEEEEEESSCHHHHH
T ss_pred hhcc--c-CcCHHHhCCCCEEEEEeCccccCCCCcceEEEEECCHHHHHHH
Confidence 4321 1 11111 136688999999885 455699999886 65544
No 181
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.76 E-value=1.4e-18 Score=155.35 Aligned_cols=202 Identities=10% Similarity=0.037 Sum_probs=136.8
Q ss_pred cCceecCCCCCCCHHHHHHhccccccCCCCCCCCCccc--CCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEe-CCChH
Q 023191 47 KGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYY--GGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQS-LSGSP 123 (286)
Q Consensus 47 ~~i~L~~~e~~~~~~v~~a~~~~l~~~~~~~~~~~~~~--~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~-~sG~~ 123 (286)
+.++|+++..++|++|+++|.+.+.+.+. .+...+. .......++-+.+|+.+++++|++.+ .+|++ |+|++
T Consensus 5 ~~~~f~pgpt~~~~~V~~a~~~~~~~~~~--~~~s~~~~~hr~~~~~~~~~~~r~~la~ll~~~~~---~~v~f~t~~~T 79 (361)
T 3m5u_A 5 RKINFSAGPSTLPLEILEQAQKELCDYQG--RGYSIMEISHRTKVFEEVHFGAQEKAKKLYELNDD---YEVLFLQGGAS 79 (361)
T ss_dssp CCEECCSSSCCCCHHHHHHHHHTSSSGGG--SSSCGGGSCSSSHHHHHHHHHHHHHHHHHHTCCTT---EEEEEESSHHH
T ss_pred ceEeecCCCCCCcHHHHHHHHHHHHhccc--CCceeeccCCCCHHHHHHHHHHHHHHHHHhCCCCC---ceEEEEcCcHH
Confidence 46789999999999999999998875332 2211110 01233456667889999999999643 25887 88888
Q ss_pred -HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCC-CCCCHHHHHHHhhhcCCcEEEE
Q 023191 124 -SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNEST-GYIDYDQLEKSATLFRPKLIVA 201 (286)
Q Consensus 124 -a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~-~~~d~e~l~~~i~~~~tk~v~i 201 (286)
++.+++..++ +||++++....+-++ ++. ..++..|..++.++.+. ++ +.++++. + +++ +|++|.+
T Consensus 80 ~a~n~~~~~~~-~~~~~~~i~~~~~~~--~~~----~~a~~~G~~v~~~~~~~--~g~~~~~~~~-~--l~~-~t~lv~~ 146 (361)
T 3m5u_A 80 LQFAMIPMNLA-LNGVCEYANTGVWTK--KAI----KEAQILGVNVKTVASSE--ESNFDHIPRV-E--FSD-NADYAYI 146 (361)
T ss_dssp HHHHHHHHHHC-CSSCEEEEECSHHHH--HHH----HHHHHTTCCEEEEEECT--TTTSCSCCCC-C--CCT-TSSEEEE
T ss_pred HHHHHHHHhcC-CCCeEEEEeCCHHHH--HHH----HHHHHcCCceEEEeccc--CcCCCcCChh-h--cCC-CCCEEEE
Confidence 7777888888 899764333222222 111 11223455666676432 22 1245555 3 776 8999988
Q ss_pred c-CCC-CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCCcceEEEeCCCCCCCCCCc-eEEEEecchhhhh
Q 023191 202 G-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEIN 278 (286)
Q Consensus 202 ~-~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~g-G~l~~~~~~~~~~ 278 (286)
+ .+| +|...|. +++ +|+++++|++|++|..+.++. . .|++++|+|||+ ||.| |++++++++.+..
T Consensus 147 ~~~e~~tG~~~~~-----i~~-~~~~~~vD~~q~~g~~~id~~--~---~d~~~~s~~K~~-gp~G~g~l~~~~~~~~~~ 214 (361)
T 3m5u_A 147 CSNNTIYGTQYQN-----YPK-TKTPLIVDASSDFFSRKVDFS--N---IALFYGGVQKNA-GISGLSCIFIRKDMLERS 214 (361)
T ss_dssp ESEETTTTEECSS-----CCC-CSSCEEEECGGGTTSSCCCCT--T---EEEEEEETTTTS-SCTTCEEEEEEHHHHHHH
T ss_pred eCCCCCcceeCCc-----ccc-cCCEEEEEcccccCCCCCCcc--c---CCEEEEechhcc-CCCccEEEEEcHHHHhhh
Confidence 6 333 5766552 344 499999999999999887764 2 799999999999 7999 9999998876433
No 182
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=99.75 E-value=6.6e-18 Score=152.29 Aligned_cols=206 Identities=12% Similarity=0.060 Sum_probs=134.5
Q ss_pred HcCceecCCC---C----CCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCC--CCCCCcceeE
Q 023191 46 WKGLELIPSE---N----FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFR--LDPEKWGVNV 116 (286)
Q Consensus 46 ~~~i~L~~~e---~----~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g--~~~~~~~~~v 116 (286)
.+.++|..++ + ++++.+++++.+.+.+....+ |+...+..++++++.+++.+..+ ++++ +|
T Consensus 26 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~------y~~~~g~~~lr~~la~~~~~~~~~~~~~~----~v 95 (396)
T 2q7w_A 26 PGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENETTKN------YLGIDGIPEFGRCTQELLFGKGSALINDK----RA 95 (396)
T ss_dssp --CEESSCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCC------CCCTTCCHHHHHHHHHHHHCTTCHHHHTT----CE
T ss_pred CCceecccccccCCCCCccCcHHHHHHHHhhcCcccccC------CCCCCCCHHHHHHHHHHHhcCCCCccccc----cE
Confidence 3578998886 2 356999999987664311112 33445667888777777754333 2343 48
Q ss_pred Ee--CCChH-HHHHHHHHh--cCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHh
Q 023191 117 QS--LSGSP-SNFQVYTAL--LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSA 191 (286)
Q Consensus 117 ~~--~sG~~-a~~~~l~a~--~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i 191 (286)
++ |+|++ ++.+++.++ +.+||+|+++++.|.++. ..+...|.+++.+++... +++.+|++++++.+
T Consensus 96 ~~~~~~g~~~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~--------~~~~~~g~~~~~~~~~~~-~~~~~d~~~l~~~l 166 (396)
T 2q7w_A 96 RTAQTPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHK--------SVFNSAGLEVREYAYYDA-ENHTLDFDALINSL 166 (396)
T ss_dssp EEEEESHHHHHHHHHHHHHHHHSCCCEEEEEESCCTHHH--------HHHHHTTCEEEEEECEET-TTTEECHHHHHHHH
T ss_pred EEEecccchhhHHHHHHHHHHhCCCCEEEEcCCCchhHH--------HHHHHcCCceEEEecccC-CCCCcCHHHHHHHH
Confidence 77 88888 777666655 579999999996665543 344556766666654321 45789999999999
Q ss_pred hhc--CCcEEEEc-CCC-CCCccC---HHHHHHHHHhcCCEEEEecccccccccc-----CCCCCC-CCcceEEEeCCCC
Q 023191 192 TLF--RPKLIVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAA-----GVIPSP-FEYADVVTTTTHK 258 (286)
Q Consensus 192 ~~~--~tk~v~i~-~~n-~g~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~~-----~~~~~~-~~~~D~v~~s~~K 258 (286)
++. ++++++++ ++| +|...+ +++|+++|++||+++|+|++|....... ...... ....++++.|++|
T Consensus 167 ~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK 246 (396)
T 2q7w_A 167 NEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMHKELIVASSYSX 246 (396)
T ss_dssp TTCCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCHHHHTHHHHHHHHHCSCEEEEEECTT
T ss_pred HhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCccchhHHHHHHHhcCCcEEEEEeccc
Confidence 753 35677777 666 666554 6689999999999999999976432210 000000 0014578999999
Q ss_pred CCC--CCCceEEEE
Q 023191 259 SLR--GPRGAMIFF 270 (286)
Q Consensus 259 ~l~--gp~gG~l~~ 270 (286)
+++ |.+.|++++
T Consensus 247 ~~~~~G~riG~~~~ 260 (396)
T 2q7w_A 247 NFGLYNERVGACTL 260 (396)
T ss_dssp TTTCGGGCCEEEEE
T ss_pred cccccccccceEEE
Confidence 885 333499987
No 183
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=99.75 E-value=2.2e-17 Score=151.96 Aligned_cols=226 Identities=14% Similarity=0.122 Sum_probs=139.7
Q ss_pred hhccccccccCh-HHHHHHHHHHHHHH-cCceecCCCC-------CCCHHHHHHhccccc--cCCCCCCCCCcccCCcch
Q 023191 21 KQLNAPLEVVDP-EIADIIEHEKARQW-KGLELIPSEN-------FTSVSVMQAVGSVMT--NKYSEGYPGARYYGGNEY 89 (286)
Q Consensus 21 ~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~i~L~~~e~-------~~~~~v~~a~~~~l~--~~~~~~~~~~~~~~~~~~ 89 (286)
++++ .+...++ .++.......+... ..|+|..+.. ++.+.+++++.+... .... ..|....+
T Consensus 23 ~~~~-~~~~~~~~~i~~~~~~~~~~~~~~~i~l~~g~~~d~~~~~~v~~av~~a~~~~~~~~~~~~------~~Y~~~~G 95 (448)
T 3meb_A 23 SVFS-GFPASPPDAILNLTVLYNADTNPKKVNLGVGAYRDESGKPWILPAVKEAEAIISSDLSKYN------KEYPPVAG 95 (448)
T ss_dssp CTTT-TCCCCCCCTTHHHHHHHHHCCCTTCEEESSCCCCCTTSCCCCCHHHHHHHHHHHHCTTTTC------CSCCCTTC
T ss_pred hHHh-cCCCCCCChHHHHHHHHHhCCCCCeEEeecccccCCCCCEechHHHHHHHHHHhhcccCCC------CCCCCCcc
Confidence 4443 4444444 45555544332222 3588877654 235667777544431 1111 12344456
Q ss_pred HHHHHHHHHHHHHHHCCCC-----CCCcceeEEe--CCChH-HHHH--HHHHhcCCCCeEEeccCCCCcccCcccccccc
Q 023191 90 IDMAESLCQKRALEAFRLD-----PEKWGVNVQS--LSGSP-SNFQ--VYTALLKPHDRIMALDLPHGGHLSHGYQTDTK 159 (286)
Q Consensus 90 ~~~l~~~~~~~~~~~~g~~-----~~~~~~~v~~--~sG~~-a~~~--~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~ 159 (286)
..++++++.+++ +|.+ ++ +|++ |+|++ ++.+ .+.++++|||+|+++++.|..+. .
T Consensus 96 ~~~lr~~ia~~l---~g~~~~~~~~~----~i~~~~t~ggt~al~l~~~~~~~~~~gd~Vlv~~p~~~~~~--------~ 160 (448)
T 3meb_A 96 FPLFLEAAQFLM---FGKDSKAAQEG----RIASCQSLSGTGSLHIGFEFLHLWMPKAEFYMPSTTWPNHY--------G 160 (448)
T ss_dssp CHHHHHHHHHHH---HCTTCHHHHTT----CEEEEEESHHHHHHHHHHHHHHHHCTTCCEEEESSCCTHHH--------H
T ss_pred hHHHHHHHHHHh---cCCCccccCcC----cEEEEECCcHHHHHHHHHHHHHHhCCCCEEEECCCCCHhHH--------H
Confidence 677886666665 3665 33 4888 99998 7654 45677899999999996665543 2
Q ss_pred ccc----cceeeeEEEecccCCC-CCCCCHHHHHHHhhh--cCCcEEEEc-CCC-CCCccC---HHHHHHHHHhcCCEEE
Q 023191 160 KIS----AVSIFFETMPYRLNES-TGYIDYDQLEKSATL--FRPKLIVAG-ASA-YARLYD---YERIRKVCNKQKAIML 227 (286)
Q Consensus 160 ~~~----~~g~~~~~v~~~~~~~-~~~~d~e~l~~~i~~--~~tk~v~i~-~~n-~g~~~~---l~~I~~ia~~~~~~vi 227 (286)
.+. ..|.+++.+++. +.+ ++.+|++++++.+++ .++++++++ ++| +|...+ +++|+++|++||+++|
T Consensus 161 ~~~~~~~~~G~~v~~~~~~-~~~~~~~~d~e~l~~~l~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~l~~~~~~~li 239 (448)
T 3meb_A 161 IYDKVFNKLKVPYKEYTYL-RKDGELEIDFSNTKKDIQSAPEKSIFLFHACAHNPSGIDFTEAQWKELLPIMKEKKHIAF 239 (448)
T ss_dssp HHHHHHCTTTSCCEEECCB-CTTSCSSBCHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEE
T ss_pred HHHhhHHhCCCeEEEEecc-ccccCCCcCHHHHHHHHHhCCCCcEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHCCCEEE
Confidence 444 567666666542 434 589999999999985 256777776 666 666555 6669999999999999
Q ss_pred EeccccccccccCC--CCCCC------CcceEEEeCCCCCCC--CCCceEE--EE
Q 023191 228 ADMAHISGLVAAGV--IPSPF------EYADVVTTTTHKSLR--GPRGAMI--FF 270 (286)
Q Consensus 228 vD~a~~~g~~~~~~--~~~~~------~~~D~v~~s~~K~l~--gp~gG~l--~~ 270 (286)
+|++|..... .+. ....+ ....+++.|+||.|+ |.+-|++ ++
T Consensus 240 ~Deay~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~v~ 293 (448)
T 3meb_A 240 FDSAYQGFAT-GSFEADAFAVRMFVDAGVEVLVAQSFSKNFGLYGERIGCLHVVH 293 (448)
T ss_dssp EEESCTTTSS-SCHHHHTHHHHHHHHTTCCEEEEEECTTTSCCGGGCCEEEEEEC
T ss_pred EecccccccC-CCcccCchhHHHHhhcCCcEEEEecccccCCCccccceeeeeee
Confidence 9999653221 110 00000 113477999999875 3344887 55
No 184
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=99.75 E-value=7.2e-18 Score=152.02 Aligned_cols=222 Identities=14% Similarity=0.104 Sum_probs=140.7
Q ss_pred ccccChHHHHHHHHHHHHH--HcCceecCCCC-------CCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHH
Q 023191 27 LEVVDPEIADIIEHEKARQ--WKGLELIPSEN-------FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLC 97 (286)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~--~~~i~L~~~e~-------~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~ 97 (286)
+...++..+..+....... .+.++|..++. ++++.+.+++.+.+......+ |+...+..++++++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~------y~~~~g~~~lr~~l 78 (394)
T 2ay1_A 5 LKPQAPDKILALMGEFRADPRQGKIDLGVGVYKDATGHTPIMRAVHAAEQRMLETETTKT------YAGLSGEPEFQKAM 78 (394)
T ss_dssp CCCCCCCSHHHHHHHHHHCCCTTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCC------CCCSSCCHHHHHHH
T ss_pred CccCCCccHHHHHHHHHhCCCccccccccceeeCCCCCccCcHHHHHHHHHhcCCcccCC------CCCCCCcHHHHHHH
Confidence 3444444444343333222 35688988762 347999999987664311112 33335567788777
Q ss_pred HHHHHHHCCCCCCCcceeEEe--CCChH-HHHHHHHHhc--CCCCeEEeccCCCCcccCccccccccccccceeeeEEEe
Q 023191 98 QKRALEAFRLDPEKWGVNVQS--LSGSP-SNFQVYTALL--KPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMP 172 (286)
Q Consensus 98 ~~~~~~~~g~~~~~~~~~v~~--~sG~~-a~~~~l~a~~--~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~ 172 (286)
.+++... +.+++ +|++ |+|++ ++.+++.++. .+||+|+++.+.|.++ ...+...|.+++.++
T Consensus 79 a~~~~~~-~~~~~----~v~~~~~~g~~~a~~~~~~~~~~~~~gd~vl~~~p~~~~~--------~~~~~~~g~~~~~~~ 145 (394)
T 2ay1_A 79 GELILGD-GLKSE----TTATLATVGGTGALRQALELARMANPDLRVFVSDPTWPNH--------VSIMNFMGLPVQTYR 145 (394)
T ss_dssp HHHHHGG-GCCGG----GEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCHHH--------HHHHHHHTCCEEEEE
T ss_pred HHHHhCC-CCCcc----cEEEEecCCchhHHHHHHHHHHhcCCCCEEEEcCCCChhH--------HHHHHHcCCceEEEe
Confidence 7766322 22443 4887 88888 7776776664 4999999999655554 334445666666666
Q ss_pred cccCCCCCCCCHHHHHHHhhhc--CCcEEEEc-CCC-CCCccC---HHHHHHHHHhcCCEEEEeccccccccc-------
Q 023191 173 YRLNESTGYIDYDQLEKSATLF--RPKLIVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVA------- 238 (286)
Q Consensus 173 ~~~~~~~~~~d~e~l~~~i~~~--~tk~v~i~-~~n-~g~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~------- 238 (286)
+... +++.+|++++++.+++. ++++++++ ++| +|...+ +++|+++|++||+++|+|++|+.....
T Consensus 146 ~~~~-~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~ 224 (394)
T 2ay1_A 146 YFDA-ETRGVDFEGMKADLAAAKKGDMVLLHGCCHNPTGANLTLDQWAEIASILEKTGALPLIDLAYQGFGDGLEEDAAG 224 (394)
T ss_dssp CEET-TTTEECHHHHHHHHHTCCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEECCTTSSSCHHHHHHH
T ss_pred cccc-cCCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecCccccccCcccchHH
Confidence 4322 45789999999999763 35666666 666 666554 668899999999999999998743221
Q ss_pred cC-CCCCCCCcceEEEeCCCCCCC--CCCceEEEE
Q 023191 239 AG-VIPSPFEYADVVTTTTHKSLR--GPRGAMIFF 270 (286)
Q Consensus 239 ~~-~~~~~~~~~D~v~~s~~K~l~--gp~gG~l~~ 270 (286)
.. +.... ...+++.|++|+++ |.+.|++++
T Consensus 225 ~~~~~~~~--~~~i~~~s~sK~~~~~G~riG~~~~ 257 (394)
T 2ay1_A 225 TRLIASRI--PEVLIAASCSKNFGIYRERTGCLLA 257 (394)
T ss_dssp HHHHHHHC--SSEEEEEECTTTTTCGGGCEEEEEE
T ss_pred HHHHhhcC--CCEEEEEeccCCCcCcCCccceEEE
Confidence 00 10001 13477899999885 333499988
No 185
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=99.74 E-value=1.2e-17 Score=148.39 Aligned_cols=198 Identities=11% Similarity=0.046 Sum_probs=135.3
Q ss_pred HcCceecCCCCC--CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH
Q 023191 46 WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP 123 (286)
Q Consensus 46 ~~~i~L~~~e~~--~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~ 123 (286)
.+.++|..++++ +++.+++++.+.+.... +|+. ..+ .+ +++++++++|++++ +|++|+|++
T Consensus 15 ~~~id~~~~~~~~~~~~~v~~a~~~~~~~~~--~y~~------~~~-~~----lr~~la~~~~~~~~----~i~~t~g~~ 77 (350)
T 3fkd_A 15 SEIVNFSTTVWTDGDKDHLEKHLVENLNCIR--HYPE------PDA-GT----LRQMLAKRNSVDNN----AILVTNGPT 77 (350)
T ss_dssp -CCEECSCCSCCCSCCHHHHHHHHHTGGGGG--SCCC------TTC-HH----HHHHHHHHTTCCGG----GEEEESHHH
T ss_pred ccEEEccCCCCCCCCCHHHHHHHHHhHhHHh--cCCC------CcH-HH----HHHHHHHHhCcCHH----HEEEcCCHH
Confidence 467999988874 58999999988774321 2332 222 34 45888888898775 499999999
Q ss_pred -HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc
Q 023191 124 -SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG 202 (286)
Q Consensus 124 -a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~ 202 (286)
++.+++.++. ||+|+++.+.|.++ ...+...|.+++.+++. + +...+++ + ++++|+++
T Consensus 78 ~al~~~~~~l~--gd~Vi~~~p~~~~~--------~~~~~~~g~~~~~v~~~-~-~~~~~~~--------~-~~~~v~i~ 136 (350)
T 3fkd_A 78 AAFYQIAQAFR--GSRSLIAIPSFAEY--------EDACRMYEHEVCFYPSN-E-DIGEADF--------S-NMDFCWLC 136 (350)
T ss_dssp HHHHHHHHHTT--TCEEEEEESCCHHH--------HHHHHHTTCEEEEEETT-S-CGGGSCC--------T-TCSEEEEE
T ss_pred HHHHHHHHHHC--CCEEEEeCCCcHHH--------HHHHHHcCCeEEEEecC-C-ccccCcc--------C-CCCEEEEe
Confidence 8777778777 99999999555444 33455667666666531 3 2223333 3 79999987
Q ss_pred -CCC-CCCccCHHHHHHHHHhcC-CEEEEeccccccccccCCCCCCCC--cceEEEeCCCCCCC--CCCceEEEEecchh
Q 023191 203 -ASA-YARLYDYERIRKVCNKQK-AIMLADMAHISGLVAAGVIPSPFE--YADVVTTTTHKSLR--GPRGAMIFFRKGVK 275 (286)
Q Consensus 203 -~~n-~g~~~~l~~I~~ia~~~~-~~vivD~a~~~g~~~~~~~~~~~~--~~D~v~~s~~K~l~--gp~gG~l~~~~~~~ 275 (286)
++| +|...+.++|.++++.++ .++|+|++|+............+. ..++++.|++|+++ |.+.|++++++++.
T Consensus 137 ~p~nptG~~~~~~~l~~l~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~ 216 (350)
T 3fkd_A 137 NPNNPDGRLLQRTEILRLLNDHPDTTFVLDQSYVSFTTEEVIRPADIKGRKNLVMVYSFSHAYGIPGLRIGYIVANKDFM 216 (350)
T ss_dssp SSCTTTCCCCCHHHHHHHHHHCTTSEEEEECTTTTSCSSCCCCGGGGTTCSSEEEEEESHHHHSCGGGCCEEEECCHHHH
T ss_pred CCCCCcCCCCCHHHHHHHHHhCCCCEEEEECchhhhccCcchhhHHhhcCCCEEEEecCchhccCcchheEeEEeCHHHH
Confidence 666 788999999999998876 799999998643221111111111 35688999999885 44559999988877
Q ss_pred hhhccC
Q 023191 276 EINKQG 281 (286)
Q Consensus 276 ~~~~~~ 281 (286)
+..++.
T Consensus 217 ~~~~~~ 222 (350)
T 3fkd_A 217 KRVAAF 222 (350)
T ss_dssp HHHHTT
T ss_pred HHHHHh
Confidence 766644
No 186
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=99.73 E-value=6.6e-18 Score=154.93 Aligned_cols=171 Identities=15% Similarity=0.066 Sum_probs=123.7
Q ss_pred cchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-HHHHHHHHh-cCCCCeEEeccCCCCcccCccccccccccccc
Q 023191 87 NEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTAL-LKPHDRIMALDLPHGGHLSHGYQTDTKKISAV 164 (286)
Q Consensus 87 ~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l~a~-~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~ 164 (286)
.++..++.+++++++++++|++++ ++.+++|++ ++.+++.++ +++||+|+++++.|+++..++.. .+...
T Consensus 103 ~~g~~~~~~~~~~~la~~~g~~~~----~i~~~~g~taa~ea~~~a~~~~~gd~Viv~~~~h~s~~~~~~~----~a~~~ 174 (438)
T 1wyu_A 103 SQGVLQATFEYQTMIAELAGLEIA----NASMYDGATALAEGVLLALRETGRMGVLVSQGVHPEYRAVLRA----YLEAV 174 (438)
T ss_dssp CHHHHHHHHHHHHHHHHHHTSSEE----CSCBSSHHHHHHHHHHHHHHHHTCCEEEEETTSCHHHHHHHHH----HHHHT
T ss_pred hhhHHHHHHHHHHHHHHHhCCCcc----ceEEeCcHHHHHHHHHHHHhcCCCCEEEEcCccCHhHHHHHHH----HHHHC
Confidence 356677888899999999999763 588889888 444444443 68999999999888776543321 11235
Q ss_pred eeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCC-CCCccCHHHHHHHHHhcCCEEEEecc-ccccccccCCC
Q 023191 165 SIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASA-YARLYDYERIRKVCNKQKAIMLADMA-HISGLVAAGVI 242 (286)
Q Consensus 165 g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~~~n-~g~~~~l~~I~~ia~~~~~~vivD~a-~~~g~~~~~~~ 242 (286)
|.+++.++. +++.+|+++ +++ +|++|+++.+| +|.+.|+++|+++|+++|+++++|.. ++.|..... .
T Consensus 175 G~~v~~v~~----~~~~~d~~~----i~~-~t~~v~i~~pn~tG~~~~l~~i~~la~~~g~~vivd~d~~a~g~~~~~-~ 244 (438)
T 1wyu_A 175 GAKLLTLPL----EGGRTPLPE----VGE-EVGAVVVQNPNFLGALEDLGPFAEAAHGAGALFVAVADPLSLGVLKPP-G 244 (438)
T ss_dssp TCEEEEECC----BTTBCCCCC----CCT-TEEEEEEESSCTTSBCCCHHHHHHHHHHTTCEEEEECCTTGGGTBCCH-H
T ss_pred CCEEEEEcC----cCCccCHHH----hCC-CeEEEEEECCCCCeEEecHHHHHHHHHHcCCEEEEEechhhccCcCCC-c
Confidence 666666653 246777766 566 89999997336 88888999999999999999998855 555543211 0
Q ss_pred CCCCCcceEEEeCCCC-----CCCCCCceEEEEecchhhhh
Q 023191 243 PSPFEYADVVTTTTHK-----SLRGPRGAMIFFRKGVKEIN 278 (286)
Q Consensus 243 ~~~~~~~D~v~~s~~K-----~l~gp~gG~l~~~~~~~~~~ 278 (286)
.. ++|++++|+|| |++||+.|++++++++.+..
T Consensus 245 ~~---g~D~~~~s~kk~~~~~~~~Gp~~G~l~~~~~~~~~l 282 (438)
T 1wyu_A 245 AY---GADIAVGDGQSLGLPMGFGGPHFGFLATKKAFVRQL 282 (438)
T ss_dssp HH---TCSEEEEECTTTTCCCGGGCSCCEEEEECGGGGGGC
T ss_pred cC---CCCEEEECCcccCCCccCCCCCeeEEEEcHHHHHhC
Confidence 11 48999999887 78899559999998876544
No 187
>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*
Probab=99.73 E-value=7.8e-18 Score=148.78 Aligned_cols=195 Identities=12% Similarity=0.029 Sum_probs=133.4
Q ss_pred cCceecCCCCC--CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCC---CCCCCcceeEEeCCC
Q 023191 47 KGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFR---LDPEKWGVNVQSLSG 121 (286)
Q Consensus 47 ~~i~L~~~e~~--~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g---~~~~~~~~~v~~~sG 121 (286)
+.++|..++++ +++.+++++.+.+......+|+ . .+..+++ +.++++++ ++++ +|++++|
T Consensus 20 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~------~-~~~~~lr----~~la~~~~~~~~~~~----~v~~~~G 84 (335)
T 1uu1_A 20 DKTYLALNENPFPFPEDLVDEVFRRLNSDALRIYY------D-SPDEELI----EKILSYLDTDFLSKN----NVSVGNG 84 (335)
T ss_dssp CSEEESSCCCSSCCCHHHHHHHHHTCCGGGGGSCC------C-SSCHHHH----HHHHHHHTCSSCCGG----GEEEESS
T ss_pred cceECCCCCCCCCCCHHHHHHHHHHhhhhhhhcCC------C-CchHHHH----HHHHHHcCCCCCCHH----HEEEcCC
Confidence 46899888883 5899999998877321111232 1 1345566 55556666 6654 5999999
Q ss_pred hH-HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEE
Q 023191 122 SP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIV 200 (286)
Q Consensus 122 ~~-a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~ 200 (286)
++ ++..++.++ ||+|+++ +.|.++.. .+...|.+++.++ .+ +++.+|++++ + ++++|+
T Consensus 85 ~~~al~~~~~~~---gd~Vl~~-p~y~~~~~--------~~~~~g~~~~~v~--~~-~~~~~d~~~l-----~-~~~~v~ 143 (335)
T 1uu1_A 85 ADEIIYVMMLMF---DRSVFFP-PTYSCYRI--------FAKAVGAKFLEVP--LT-KDLRIPEVNV-----G-EGDVVF 143 (335)
T ss_dssp HHHHHHHHHHHS---SEEEECS-SSCHHHHH--------HHHHHTCEEEECC--CC-TTSCCCCCCC-----C-TTEEEE
T ss_pred hHHHHHHHHHHh---CCcEEEC-CCcHHHHH--------HHHHcCCeEEEec--cC-CCCCCCHHHc-----C-CCCEEE
Confidence 98 777677777 9999998 88876543 2334565554444 44 4567887776 3 799999
Q ss_pred Ec-CCC-CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCC-CCCCcceEEEeCCCCCCC--CCCceEEEEecchh
Q 023191 201 AG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIP-SPFEYADVVTTTTHKSLR--GPRGAMIFFRKGVK 275 (286)
Q Consensus 201 i~-~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~-~~~~~~D~v~~s~~K~l~--gp~gG~l~~~~~~~ 275 (286)
++ |+| +|...+.+++.++++..| ++|+|++|+..... .... ....+.++++.|++|+++ |.+.|++++++++.
T Consensus 144 l~~p~nptG~~~~~~~l~~l~~~~~-~li~De~~~~~~~~-~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~ 221 (335)
T 1uu1_A 144 IPNPNNPTGHVFEREEIERILKTGA-FVALDEAYYEFHGE-SYVDFLKKYENLAVIRTFSKAFSLAAQRVGYVVASEKFI 221 (335)
T ss_dssp EESSCTTTCCCCCHHHHHHHHHTTC-EEEEECTTHHHHCC-CCGGGGGTCSSEEEEEESTTTTTCGGGCCEEEEECHHHH
T ss_pred EeCCCCCCCCCCCHHHHHHHHHhCC-EEEEECcchhhcch-hHHHHhhhCCCEEEEecchhhcCCcccCeEEEEeCHHHH
Confidence 76 766 778899999999999989 99999998742211 1000 011136789999999885 33459999988876
Q ss_pred hhhc
Q 023191 276 EINK 279 (286)
Q Consensus 276 ~~~~ 279 (286)
+..+
T Consensus 222 ~~l~ 225 (335)
T 1uu1_A 222 DAYN 225 (335)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6554
No 188
>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*
Probab=99.73 E-value=1.2e-18 Score=158.86 Aligned_cols=174 Identities=10% Similarity=0.036 Sum_probs=124.5
Q ss_pred chHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-HHHHHHHHhcC----CCCeEEeccCCCCcccCccccccccccc
Q 023191 88 EYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLK----PHDRIMALDLPHGGHLSHGYQTDTKKIS 162 (286)
Q Consensus 88 ~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l~a~~~----~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~ 162 (286)
.....+++.+..++.+++|++... ..++++|+| +..+++.+.++ +++.|+++...|.+... .+.
T Consensus 94 ~~~~~~e~~~~~~~~~~lGlp~~~---~~~lV~GaT~~~~a~~L~aar~~~~~~~~viv~r~aHkSv~k--------Al~ 162 (450)
T 3bc8_A 94 SLLNKITNSLVLNVIKLAGVHSVA---SCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFK--------SMV 162 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHTCTTCC---EEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHH--------HHH
T ss_pred cHHHHHHHHHHHHHHHhCCCCCCc---eEEEECCHHHHHHHHHHHHcchhhcCCCEEEEECCcHHHHHH--------HHH
Confidence 345678888889999999997643 456667776 43334444444 38999999988777765 455
Q ss_pred cceeeeEEEecccCCCCCCCCHHHHHHHhhhcC--CcEEEE-cCCCCC--CccCHHHHHHHHHhcCCEEEEecccccccc
Q 023191 163 AVSIFFETMPYRLNESTGYIDYDQLEKSATLFR--PKLIVA-GASAYA--RLYDYERIRKVCNKQKAIMLADMAHISGLV 237 (286)
Q Consensus 163 ~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~--tk~v~i-~~~n~g--~~~~l~~I~~ia~~~~~~vivD~a~~~g~~ 237 (286)
+.|...+.++...+.+.+.+|++.|+++|.++. .+++++ ++++++ ...|+++|+++|++||++++||+||++...
T Consensus 163 l~Gl~p~~v~~~~~~~~~~id~~~le~aI~~~~~~~~~~Vv~t~t~~g~g~~ddl~~Ia~ia~~~gi~l~VD~A~G~~~~ 242 (450)
T 3bc8_A 163 TAGFEPVVIENVLEGDELRTDLKAVEAKIQELGPEHILCLHSTTACFAPRVPDRLEELAVICANYDIPHVVNNAYGLQSS 242 (450)
T ss_dssp HTTCEEEEECCEEETTEEECCHHHHHHHHHHHCGGGEEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTTTTCH
T ss_pred HcCCeeEEEEeeecCccCCcCHHHHHHHHHhcCCCCEEEEEEECCcCCCceecCHHHHHHHHHHCCCeEEEECCCchhhh
Confidence 778776666533333467899999999997743 234444 577776 689999999999999999999999875433
Q ss_pred ccC-CCCCCC--CcceEEEeCCCCCCCCCCc-eEEEEec
Q 023191 238 AAG-VIPSPF--EYADVVTTTTHKSLRGPRG-AMIFFRK 272 (286)
Q Consensus 238 ~~~-~~~~~~--~~~D~v~~s~~K~l~gp~g-G~l~~~~ 272 (286)
... +....+ +++|+++.|+|||++.|.+ +++++++
T Consensus 243 ~~~~l~~~a~~~~~AD~~v~S~HK~l~a~~~~~~l~~rd 281 (450)
T 3bc8_A 243 KCMHLIQQGARVGRIDAFVQSLDKNFMVPVGGAIIAGFN 281 (450)
T ss_dssp HHHHHHHHHHHHSCCCEEEEEHHHHHSCCSSCEEEEESC
T ss_pred hhHhHHHHHhcccCCCEEEECCccCCCchhccEEEEecC
Confidence 211 111112 3599999999999999988 7777765
No 189
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=99.72 E-value=7.4e-18 Score=155.46 Aligned_cols=193 Identities=12% Similarity=0.148 Sum_probs=122.3
Q ss_pred HHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-HHHHHHHHhcC----
Q 023191 60 VSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLK---- 134 (286)
Q Consensus 60 ~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l~a~~~---- 134 (286)
+.+++++.+.+.... ..|+...+..+++ ++++++++.+ +|++|+|++ ++.+++.++++
T Consensus 55 ~~v~~a~~~~~~~~~-------~~y~~~~~~~~l~----~~la~~~~~~------~v~~t~ggt~A~~~al~~~~~~~~~ 117 (467)
T 1ax4_A 55 NAMSDHQWAAMITGD-------EAYAGSRNYYDLK----DKAKELFNYD------YIIPAHQGRGAENILFPVLLKYKQK 117 (467)
T ss_dssp CCEEHHHHHHHHTCC-------CCSSSCHHHHHHH----HHHHHHHCCC------EEEEESSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhcc-------cccccCccHHHHH----HHHHHHcCCC------cEEEcCCcHHHHHHHHHHHHHhhcc
Confidence 555666655543311 1134445556666 6666677753 388888887 88888888888
Q ss_pred CCCe---EEeccCCCCcccCccccccccccccceeeeEEEeccc--CC-----CCCCCCHHHHHHHhhhc---CCcEEEE
Q 023191 135 PHDR---IMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRL--NE-----STGYIDYDQLEKSATLF---RPKLIVA 201 (286)
Q Consensus 135 ~Gd~---Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~-----~~~~~d~e~l~~~i~~~---~tk~v~i 201 (286)
+||+ |+++.+.|..+.. .+...|..+..++... +. .++.+|+++|++++++. ++++|++
T Consensus 118 ~Gd~~~~viv~~~~~~~~~~--------~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~~vi~ 189 (467)
T 1ax4_A 118 EGKAKNPVFISNFHFDTTAA--------HVELNGCKAINIVTEKAFDSETYDDWKGDFDIKKLKENIAQHGADNIVAIVS 189 (467)
T ss_dssp TTCCSSCEEEESSCCHHHHH--------HHHHTTCEEEECBCGGGGCTTSCCTTTTCBCHHHHHHHHHHHCGGGEEEEEE
T ss_pred CCCccceEEEeccccchhhH--------HHhccCCceecccccccccccccCCcccccCHHHHHHHHHhcCCCCeeEEEE
Confidence 9999 8887422222211 2223444443333211 11 13578999999999752 6899998
Q ss_pred c-CCC-C-CCc---cCHHHHHHHHHhcCCEEEEeccccc-ccc--------ccCCCCCCC-----CcceEEEeCCCCCCC
Q 023191 202 G-ASA-Y-ARL---YDYERIRKVCNKQKAIMLADMAHIS-GLV--------AAGVIPSPF-----EYADVVTTTTHKSLR 261 (286)
Q Consensus 202 ~-~~n-~-g~~---~~l~~I~~ia~~~~~~vivD~a~~~-g~~--------~~~~~~~~~-----~~~D~v~~s~~K~l~ 261 (286)
+ ++| + |.. .++++|+++|++||+++|+|++|.. +.. ..+.....+ ..+|++++|+||+++
T Consensus 190 ~~~~np~gG~~~~~~~l~~i~~la~~~gi~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~g 269 (467)
T 1ax4_A 190 TVTCNSAGGQPVSMSNLKEVYEIAKQHGIFVVMDSARFCENAYFIKARDPKYKNATIKEVIFDMYKYADALTMSAKKDPL 269 (467)
T ss_dssp ESSBTTTTSBCCCHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHHHHHCGGGTTCCHHHHHHHHGGGCSEEEEETTSTTC
T ss_pred eccccCCCccCCChhHHHHHHHHHHHcCCEEEEEchhhhhcchhccccccccCCCchhhhhhhhccccceEEEeccccCC
Confidence 7 555 5 444 3578999999999999999999876 322 111110001 237889999999997
Q ss_pred CCCceEEEEe-c-chhhh
Q 023191 262 GPRGAMIFFR-K-GVKEI 277 (286)
Q Consensus 262 gp~gG~l~~~-~-~~~~~ 277 (286)
.|.||+++++ + ++.+.
T Consensus 270 ~~~Gg~~~~~d~~~l~~~ 287 (467)
T 1ax4_A 270 LNIGGLVAIRDNEEIFTL 287 (467)
T ss_dssp CSSCEEEEESSCHHHHHH
T ss_pred CCcceEEEeCCHHHHHHH
Confidence 7768888888 5 55443
No 190
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Probab=99.72 E-value=1.8e-17 Score=159.29 Aligned_cols=160 Identities=16% Similarity=0.068 Sum_probs=119.3
Q ss_pred HHHHHHHHCCCCCCCcceeEEeCCChH-HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEeccc
Q 023191 97 CQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRL 175 (286)
Q Consensus 97 ~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~ 175 (286)
+++.++++||.+. .+++++|++ ++.++++++++|||+|+++++.|.++.. ++.+.|+.++.++...
T Consensus 200 aE~~lA~~fGa~~-----a~~v~nGts~An~~ai~al~~pGD~VLv~r~~H~S~~~--------~l~lsGa~pv~v~~~~ 266 (715)
T 3n75_A 200 AEQYIARVFNADR-----SYMVTNGTSTANKIVGMYSAPAGSTILIDRNCHKSLTH--------LMMMSDVTPIYFRPTR 266 (715)
T ss_dssp HHHHHHHHHTCSE-----EEEESSHHHHHHHHHHHHHCCTTCEEEEESSCCHHHHH--------HHHHSCCEEEEECCCB
T ss_pred HHHHHHHHhCCCC-----ceEECcHHHHHHHHHHHHhCCCCCEEEECCCccHHHHH--------HHHHcCCEEEEEeccc
Confidence 4488999999875 488899987 9888999999999999999988877754 4456777666555332
Q ss_pred CCCCCC----C-----CHHHHHHHhhhc-CCc---EEEEcCCC-CCCccCHHHHHHHHHhcCCEEEEeccccccccccCC
Q 023191 176 NESTGY----I-----DYDQLEKSATLF-RPK---LIVAGASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGV 241 (286)
Q Consensus 176 ~~~~~~----~-----d~e~l~~~i~~~-~tk---~v~i~~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~ 241 (286)
+.+. + |+++|+++++++ ++| +++++.+| +|.+.|+++|+++|++++ +++|+||+.+......
T Consensus 267 --~~~gi~~~i~~~~~d~e~Le~~l~~~~~~k~p~~vivt~pn~~G~v~dl~~I~ela~~~~--livDEAH~~~~~f~~~ 342 (715)
T 3n75_A 267 --NAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNSTYDGLLYNTDFIKKTLDVKS--IHFDSAWVPYTNFSPI 342 (715)
T ss_dssp --CTTCCBCCCCGGGGSHHHHHHHHHHSTTCCSCSEEEEESSCTTSEEECHHHHHHHCCCSE--EEEECTTCTTGGGSGG
T ss_pred --cccccccCcccccCCHHHHHHHHhhCcCccCceEEEEECCCCCCccCCHHHHHHHhCcCc--EEEccccccccccCCc
Confidence 2333 3 899999999862 344 77776336 788999999999998763 7999999877532221
Q ss_pred C--CCCCC---cceEE---EeCCCCCCCCCC-ceEEEEecc
Q 023191 242 I--PSPFE---YADVV---TTTTHKSLRGPR-GAMIFFRKG 273 (286)
Q Consensus 242 ~--~~~~~---~~D~v---~~s~~K~l~gp~-gG~l~~~~~ 273 (286)
. ...+. .+|++ ++|+||+++|+. ||++.++++
T Consensus 343 ~~~~~al~~g~~aD~vii~~~S~hKtL~gltqgs~i~v~~~ 383 (715)
T 3n75_A 343 YEGKCGMSGGRVEGKVIYETQSTHKLLAAFSQASMIHVKGD 383 (715)
T ss_dssp GTTSSTTSSSCCTTCEEEEEECHHHHSSCCTTCEEEEEESC
T ss_pred cccccccccCcCCCEEEEEEecccccccCCCCeeEEEeCch
Confidence 1 12222 25755 999999999984 599999876
No 191
>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}
Probab=99.71 E-value=2.9e-17 Score=149.74 Aligned_cols=242 Identities=10% Similarity=0.014 Sum_probs=148.5
Q ss_pred CCchhhccccccccChHHHHHHHHHHHHHHcCceecCC-------CCCCCHHHHHHhccccccCCCCCCCCCcccCCcch
Q 023191 17 VTWPKQLNAPLEVVDPEIADIIEHEKARQWKGLELIPS-------ENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEY 89 (286)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~L~~~-------e~~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~ 89 (286)
-+.+++|++.-...+..++.......+.....|||..| .++..+.|++|....+....+.. |.+..|
T Consensus 15 m~~~~~~~~v~~~p~d~i~~l~~~~~~d~~~kinLgvG~y~d~~g~~~vl~~Vk~A~~~~~~~~~~~~------Y~p~~G 88 (420)
T 4h51_A 15 MTTAERWQKIQAQAPDVIFDLAKRAAAAKGPKANLVIGAYRDEQGRPYPLRVVRKAEQLLLDMNLDYE------YLPISG 88 (420)
T ss_dssp CCHHHHHHTCCCCCCCHHHHHHHHHHHCCSSCEECCSCCCBCTTSCBCCCHHHHHHHHHHHHTTCCCC------CCCTTC
T ss_pred hhhhHHHhCCCCCCCChHHHHHHHHhcCCCCCEEeecCcccCCCCCCCCCHHHHHHHHHHhcCCCCCC------CCCcCC
Confidence 34566675544444445555544433222346999877 22456889888877665533222 566688
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-HHHH----HHHHhcCCCCeEEeccCCCCcccCccccccccccccc
Q 023191 90 IDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQ----VYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAV 164 (286)
Q Consensus 90 ~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~----~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~ 164 (286)
..++++++.+++.... .+.+. ...+.|.|++ +... +.+++++|||+|++++ |.|+.|...+...
T Consensus 89 ~p~lr~aia~~~~g~~-~~~~~--~~~~qt~ggtga~~~a~~~l~~~~~~pgd~V~ip~--------P~w~~y~~i~~~a 157 (420)
T 4h51_A 89 YQPFIDEAVKIIYGNT-VELEN--LVAVQTLSGTGAVSLGAKLLTRVFDAETTPIYLSD--------PTWPNHYGVVKAA 157 (420)
T ss_dssp CHHHHHHHHHHHHC----CGGG--EEEEEEEHHHHHHHHHHHHHTTTSCTTTSCEEEEE--------SCCTHHHHHHHHT
T ss_pred hHHHHHHHHHHhcCCC-ccccc--cceeeecCchHHHHHHHHHHHHhcCCCCCEEEEec--------CCchhHHHHHHHc
Confidence 8999988887663221 12211 2233355555 4332 3344568999999999 6666665566677
Q ss_pred eeeeEEEecccCCCCCCCCHHHHHHHhhh--cCCcEEEEc-CCC-CCCc---cCHHHHHHHHHhcCCEEEEecccccccc
Q 023191 165 SIFFETMPYRLNESTGYIDYDQLEKSATL--FRPKLIVAG-ASA-YARL---YDYERIRKVCNKQKAIMLADMAHISGLV 237 (286)
Q Consensus 165 g~~~~~v~~~~~~~~~~~d~e~l~~~i~~--~~tk~v~i~-~~n-~g~~---~~l~~I~~ia~~~~~~vivD~a~~~g~~ 237 (286)
|.+.+..+...+++++.+|.+.+.+.+.. .++++++++ ++| +|.. ..+++|+++|+++++++++|+++ .+..
T Consensus 158 G~~~V~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~vll~~~p~NPtG~~~~~~~~~~i~~~~~~~~~~~~~D~~Y-~~~~ 236 (420)
T 4h51_A 158 GWKNICTYAYYDPKTVSLNFEGMKKDILAAPDGSVFILHQCAHNPTGVDPSQEQWNEIASLMLAKHHQVFFDSAY-QGYA 236 (420)
T ss_dssp TCCCEEEEECEEGGGTEECHHHHHHHHHHSCSSCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESC-TTTT
T ss_pred CCeEEEeeccccccccCCCHHHHHHHHhccCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceEeeehhh-hhhc
Confidence 76533222223435678899999887753 245666666 667 7743 45889999999999999999995 4443
Q ss_pred ccCCCCCCC------C--cceEEEeCCCCCC--CCCCceEEEEecchhh
Q 023191 238 AAGVIPSPF------E--YADVVTTTTHKSL--RGPRGAMIFFRKGVKE 276 (286)
Q Consensus 238 ~~~~~~~~~------~--~~D~v~~s~~K~l--~gp~gG~l~~~~~~~~ 276 (286)
..+.....+ + ..-+++.|++|+| .|+|-|++.+..+..+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~RvG~~~~~~~~~~ 285 (420)
T 4h51_A 237 SGSLDTDAYAARLFARRGIEVLLAQSFSKNMGLYSERAGTLSLLLKDKT 285 (420)
T ss_dssp TSCHHHHTHHHHHHHHTTCCCEEEEECTTTSCCGGGCEEEEEEECSCHH
T ss_pred cCCcccchHHHHhHHhhCceEEEEeccccccccccCceEEEEecccCHH
Confidence 322111000 0 0237789999976 5677799988765443
No 192
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=99.71 E-value=3.6e-17 Score=148.45 Aligned_cols=161 Identities=16% Similarity=0.161 Sum_probs=114.5
Q ss_pred HHHHHHHHHCCCCCCCcceeEEeCCChHHHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEeccc
Q 023191 96 LCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRL 175 (286)
Q Consensus 96 ~~~~~~~~~~g~~~~~~~~~v~~~sG~~a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~ 175 (286)
++++.+++++|.+. .+++++|+.++.+ +.+++++||+|+++++.|++........ +....|.+++.++ .
T Consensus 71 ~l~~~la~l~g~~~-----~~~~~sG~~Ai~~-~~~l~~~gd~Vi~~~~~y~~~~~~~~~~---~~~~~g~~~~~v~--~ 139 (400)
T 3nmy_A 71 AYERCVAALEGGTR-----AFAFASGMAATST-VMELLDAGSHVVAMDDLYGGTFRLFERV---RRRTAGLDFSFVD--L 139 (400)
T ss_dssp HHHHHHHHHHTCSE-----EEEESSHHHHHHH-HHTTSCTTCEEEEESSCCHHHHHHHHHT---HHHHHCCEEEEEC--T
T ss_pred HHHHHHHHHhCCCC-----EEEecCHHHHHHH-HHHHcCCCCEEEEeCCCchHHHHHHHHh---hHhhcCeEEEEEC--C
Confidence 34477888888753 4778888657774 6788999999999997776543322100 0122354444443 2
Q ss_pred CCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCCcceEEE
Q 023191 176 NESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVT 253 (286)
Q Consensus 176 ~~~~~~~d~e~l~~~i~~~~tk~v~i~-~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~ 253 (286)
+ |++++++++++ +|++|+++ ++| +|...|+++|+++|++||+++|+|++|+.+.....+ .. ++|+++
T Consensus 140 ~------d~~~l~~~i~~-~~~~v~~e~~~np~G~~~~l~~i~~la~~~g~~livDe~~~~~~~~~~~-~~---g~div~ 208 (400)
T 3nmy_A 140 T------DPAAFKAAIRA-DTKMVWIETPTNPMLKLVDIAAIAVIARKHGLLTVVDNTFASPMLQRPL-SL---GADLVV 208 (400)
T ss_dssp T------SHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTHHHHCCGG-GG---TCSEEE
T ss_pred C------CHHHHHHHhcc-CCCEEEEECCCCCCCeeecHHHHHHHHHHcCCEEEEECCCcccccCChh-hc---CCcEEE
Confidence 2 89999999987 89999997 666 678889999999999999999999998765432111 11 499999
Q ss_pred eCCCCCCCCC---Cce-EEEEec-chhhhh
Q 023191 254 TTTHKSLRGP---RGA-MIFFRK-GVKEIN 278 (286)
Q Consensus 254 ~s~~K~l~gp---~gG-~l~~~~-~~~~~~ 278 (286)
.|++|+|+|| .|| ++++++ ++.+..
T Consensus 209 ~S~sK~l~g~g~~~gG~~vv~~~~~~~~~l 238 (400)
T 3nmy_A 209 HSATKYLNGHSDMVGGIAVVGDNAELAEQM 238 (400)
T ss_dssp EETTTTTTCSSSCCCEEEEECSCHHHHHHH
T ss_pred ecCccccCCCCCcceeEEEEeCCHHHHHHH
Confidence 9999999987 457 555544 454443
No 193
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=99.71 E-value=4.3e-17 Score=145.89 Aligned_cols=209 Identities=12% Similarity=0.120 Sum_probs=130.6
Q ss_pred cCceecCCCC-----CCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCC
Q 023191 47 KGLELIPSEN-----FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSG 121 (286)
Q Consensus 47 ~~i~L~~~e~-----~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG 121 (286)
..+++..+.+ .+++.+++++.+.+.... .... .|. .....+ +++.+++++|++ + +|++++|
T Consensus 29 ~~ld~~~~~~~~~~g~~~~~v~~a~~~~~~~~~---~~~~-~y~-~~~~~~----l~~~la~~~g~~-~----~v~~~~g 94 (375)
T 2eh6_A 29 EYLDFVSGIGVNSLGHAYPKLTEALKEQVEKLL---HVSN-LYE-NPWQEE----LAHKLVKHFWTE-G----KVFFANS 94 (375)
T ss_dssp EEEESSHHHHTCTTCBSCHHHHHHHHHHHHHCS---CCCT-TBC-CHHHHH----HHHHHHHTSSSC-E----EEEEESS
T ss_pred EEEEcCCcccccccCCCCHHHHHHHHHHHHhcc---ccCc-ccC-CHHHHH----HHHHHHhhcCCC-C----eEEEeCc
Confidence 3466654432 168999999988875421 1111 132 233333 458888888883 3 5999999
Q ss_pred hH-HHHHHHHH---hc---CCC-CeEEeccCCCCcccCccccccccccccceee-----eEEEecccCCCCCCCCHHHHH
Q 023191 122 SP-SNFQVYTA---LL---KPH-DRIMALDLPHGGHLSHGYQTDTKKISAVSIF-----FETMPYRLNESTGYIDYDQLE 188 (286)
Q Consensus 122 ~~-a~~~~l~a---~~---~~G-d~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~-----~~~v~~~~~~~~~~~d~e~l~ 188 (286)
++ ++.+++.+ +. +|| |+|+++++.|.++...............+.. +..++ ..|+++|+
T Consensus 95 ~t~a~~~~~~~~~~~~~~~~~g~~~vl~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~d~~~l~ 166 (375)
T 2eh6_A 95 GTESVEAAIKLARKYWRDKGKNKWKFISFENSFHGRTYGSLSATGQPKFHKGFEPLVPGFSYAK--------LNDIDSVY 166 (375)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCCCEEEEEBTCCCCSSHHHHHHCBCGGGTTTTCSCCSSEEEEC--------TTCHHHHH
T ss_pred hHHHHHHHHHHHHHHhccCCCCCCEEEEECCCcCCCchhhhhhcCCccccCCCCCCCCCceeCC--------CchHHHHH
Confidence 88 77766654 45 889 9999999777665322111100000000100 11111 15899999
Q ss_pred HHhhhcCCcEEEEcCCC--CCCccC----HHHHHHHHHhcCCEEEEecccc-ccccccCCCCCCCC-cceEEEeCCCCCC
Q 023191 189 KSATLFRPKLIVAGASA--YARLYD----YERIRKVCNKQKAIMLADMAHI-SGLVAAGVIPSPFE-YADVVTTTTHKSL 260 (286)
Q Consensus 189 ~~i~~~~tk~v~i~~~n--~g~~~~----l~~I~~ia~~~~~~vivD~a~~-~g~~~~~~~~~~~~-~~D~v~~s~~K~l 260 (286)
+++++ ++++|+++++| +|...+ +++|.++|++||+++|+|++|+ ++..........+. ..|++++| |+|
T Consensus 167 ~~l~~-~~~~v~~~~~~~~tG~~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~d~~s~S--K~~ 243 (375)
T 2eh6_A 167 KLLDE-ETAGIIIEVIQGEGGVNEASEDFLSKLQEICKEKDVLLIIDEVQTGIGRTGEFYAYQHFNLKPDVIALA--KGL 243 (375)
T ss_dssp TTCCT-TEEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEEC--GGG
T ss_pred HHhcC-CeEEEEEeCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCcchhhhhcCCCCCEEEEc--ccc
Confidence 99887 89999998444 466767 9999999999999999999987 33222111000111 27888666 988
Q ss_pred CCCCc-eEEEEecchhhhhcc
Q 023191 261 RGPRG-AMIFFRKGVKEINKQ 280 (286)
Q Consensus 261 ~gp~g-G~l~~~~~~~~~~~~ 280 (286)
+++.+ |++++++++.+..++
T Consensus 244 ~~g~~~G~~~~~~~~~~~~~~ 264 (375)
T 2eh6_A 244 GGGVPIGAILAREEVAQSFTP 264 (375)
T ss_dssp GTTSCCEEEEEEHHHHTTCCT
T ss_pred cCCCCeEEEEEcHHHHhhhcC
Confidence 77655 999999887665554
No 194
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=99.70 E-value=1.9e-17 Score=149.40 Aligned_cols=209 Identities=12% Similarity=0.074 Sum_probs=132.6
Q ss_pred CceecCCC-----CCCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCCh
Q 023191 48 GLELIPSE-----NFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS 122 (286)
Q Consensus 48 ~i~L~~~e-----~~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~ 122 (286)
.+++..++ .++++.+++++.+.+.... ... ..| . ....++++++++++++++.+ +|++++|+
T Consensus 47 ~ld~~~~~~~~~~g~~~~~v~~a~~~~~~~~~---~~~-~~~-~----~~~~~~l~~~la~~~~~~~~----~v~~~~gg 113 (395)
T 1vef_A 47 YIDCVGGYGVANLGHGNPEVVEAVKRQAETLM---AMP-QTL-P----TPMRGEFYRTLTAILPPELN----RVFPVNSG 113 (395)
T ss_dssp EEESSHHHHTCTTCBTCHHHHHHHHHHHHHCC---CCC-TTS-C----CHHHHHHHHHHHHTSCTTEE----EEEEESSH
T ss_pred EEEccCccccccCCCCCHHHHHHHHHHHHhCC---CCc-ccc-C----CHHHHHHHHHHHHhcCCCcC----EEEEcCcH
Confidence 46665443 2478999999998886521 111 112 1 23445566888899987553 58998888
Q ss_pred H-HHHHHHHHhc--CCCCeEEeccCCCCcccCccccccccccccceeeeE---EEecccCC-CCCCCCHHHHHHHhhhcC
Q 023191 123 P-SNFQVYTALL--KPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFE---TMPYRLNE-STGYIDYDQLEKSATLFR 195 (286)
Q Consensus 123 ~-a~~~~l~a~~--~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~v~~~~~~-~~~~~d~e~l~~~i~~~~ 195 (286)
+ ++.+++.++. .+||+|+++++.|.+...... ...|.... ..|+..+- .-...|++++++++++ +
T Consensus 114 ~~a~~~al~~~~~~~~~~~vi~~~~~y~~~~~~~~-------~~~g~~~~~~~~~p~~~~~~~~~~~d~~~l~~~i~~-~ 185 (395)
T 1vef_A 114 TEANEAALKFARAHTGRKKFVAAMRGFSGRTMGSL-------SVTWEPKYREPFLPLVEPVEFIPYNDVEALKRAVDE-E 185 (395)
T ss_dssp HHHHHHHHHHHHHHHSCCEEEEETTCCCCSSHHHH-------HTCCCHHHHGGGCSCSSCEEEECTTCHHHHHHHCCT-T
T ss_pred HHHHHHHHHHHHHHhCCCeEEEEcCCcCCCchhhh-------hhcCCcccccccCCCCCCeeEeCCCcHHHHHHHhcc-C
Confidence 8 8877777663 689999999876654432111 11221100 01100000 0002589999999987 8
Q ss_pred CcEEEEcCCC--CCCccC----HHHHHHHHHhcCCEEEEeccccccccccCCC-C-CCCC-cceEEEeCCCCCCCCCCc-
Q 023191 196 PKLIVAGASA--YARLYD----YERIRKVCNKQKAIMLADMAHISGLVAAGVI-P-SPFE-YADVVTTTTHKSLRGPRG- 265 (286)
Q Consensus 196 tk~v~i~~~n--~g~~~~----l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~-~-~~~~-~~D~v~~s~~K~l~gp~g- 265 (286)
+++|++++.+ +|...+ +++|.++|++||+++|+|++|+ |....+.. . .... ..|++ |+||+|+++.+
T Consensus 186 ~~~v~~~~~~~~tG~~~~~~~~l~~i~~l~~~~~~~li~Dea~~-~~~~~g~~~~~~~~~~~~d~~--s~sK~~~~g~~~ 262 (395)
T 1vef_A 186 TAAVILEPVQGEGGVRPATPEFLRAAREITQEKGALLILDEIQT-GMGRTGKRFAFEHFGIVPDIL--TLAKALGGGVPL 262 (395)
T ss_dssp EEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTT-TTTTTSSSSTHHHHTCCCSEE--EECGGGGTTSSC
T ss_pred EEEEEEeCccCCCCccCCCHHHHHHHHHHHHHcCCEEEEEeccc-CCccCCchhHhhhcCCCCCEE--EEcccccCCCce
Confidence 9999887433 677777 9999999999999999999987 43211111 0 0011 36776 56999977655
Q ss_pred eEEEEecchhhhhcc
Q 023191 266 AMIFFRKGVKEINKQ 280 (286)
Q Consensus 266 G~l~~~~~~~~~~~~ 280 (286)
|++++++++.+..++
T Consensus 263 G~~~~~~~~~~~l~~ 277 (395)
T 1vef_A 263 GVAVMREEVARSMPK 277 (395)
T ss_dssp EEEEEEHHHHHTSCT
T ss_pred EEEEehHHHHhhhcc
Confidence 999999887666554
No 195
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=99.70 E-value=2.5e-17 Score=151.91 Aligned_cols=193 Identities=13% Similarity=0.127 Sum_probs=119.6
Q ss_pred HHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-HHHHHHHHhcCC---
Q 023191 60 VSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLKP--- 135 (286)
Q Consensus 60 ~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l~a~~~~--- 135 (286)
+.+++++.+.+.... ..|+...+..+++ ++++++++.+ .+++++|++ ++.+++.++.++
T Consensus 53 ~~v~~a~~~~l~~~~-------~~y~~~~~~~~l~----~~la~~~~~~------~v~~t~~gt~A~~~al~~~~~~~~~ 115 (467)
T 2oqx_A 53 GAVTQSMQAAMMRGD-------EAYSGSRSYYALA----ESVKNIFGYQ------YTIPTHQGRGAEQIYIPVLIKKREQ 115 (467)
T ss_dssp SCCCHHHHHHTTSCC-------CCSSSCHHHHHHH----HHHHHHHCCS------EEEEEC--CCSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccCc-------ceeccCchhHHHH----HHHHHHhCcC------cEEEcCCcHHHHHHHHHHHhccccc
Confidence 677777776664311 1244445556666 6667777764 377777777 888788888888
Q ss_pred --C----CeEEeccCCCCcccCccccccccccccceeeeEEE----ecccC---CCCCCCCHHHHHHHhhh---cCCcEE
Q 023191 136 --H----DRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETM----PYRLN---ESTGYIDYDQLEKSATL---FRPKLI 199 (286)
Q Consensus 136 --G----d~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v----~~~~~---~~~~~~d~e~l~~~i~~---~~tk~v 199 (286)
| |+|++. ..|........ ...+...... +++.+ +.++.+|+++|++++++ .+|++|
T Consensus 116 ~~G~~~~d~Ii~~-~~h~~t~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~i~~~~~~~~~~v 187 (467)
T 2oqx_A 116 EKGLDRSKMVAFS-NYFFDTTQGHS-------QINGCTVRNVYIKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYI 187 (467)
T ss_dssp HHCCCTTTCEEEE-SSCCHHHHHHH-------HHTTCEEEECBCTTTTCTTSCCTTTTCBCHHHHHHHHHHHCGGGCCCE
T ss_pred cCCCCccceEEec-ccccccchhhh-------hccCcceeeccccccccCCCCCCccCCcCHHHHHHHHHhcCCCceeEE
Confidence 8 997765 33322100000 0111111111 11111 12457899999999984 279999
Q ss_pred EEc-CCC-C-CCc---cCHHHHHHHHHhcCCEEEEeccccc-ccc--------ccCCCCCCC-----CcceEEEeCCCCC
Q 023191 200 VAG-ASA-Y-ARL---YDYERIRKVCNKQKAIMLADMAHIS-GLV--------AAGVIPSPF-----EYADVVTTTTHKS 259 (286)
Q Consensus 200 ~i~-~~n-~-g~~---~~l~~I~~ia~~~~~~vivD~a~~~-g~~--------~~~~~~~~~-----~~~D~v~~s~~K~ 259 (286)
+++ ++| + |.. .++++|+++|++||+++|+|++|.. +.. ..+.....+ ..+|++++|+||+
T Consensus 188 i~~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~D~a~~~e~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~~s~sK~ 267 (467)
T 2oqx_A 188 VATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSARFAENAYFIKQREAEYKDWTIEQITRETYKYADMLAMSAKKD 267 (467)
T ss_dssp EEESSBCGGGCBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHCGGGTTSCHHHHHHHHGGGCSEEEEESSST
T ss_pred EEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhhhhhhhcccccccccCccHHHHhhhhhccCCeEEEecccc
Confidence 997 555 3 443 3588999999999999999999876 432 112111011 2378889999999
Q ss_pred CCCCCceEEEEecc-hhhh
Q 023191 260 LRGPRGAMIFFRKG-VKEI 277 (286)
Q Consensus 260 l~gp~gG~l~~~~~-~~~~ 277 (286)
++.|.||+++++++ +.+.
T Consensus 268 ~g~~~Gg~~~~~~~~~~~~ 286 (467)
T 2oqx_A 268 AMVPMGGLLCMKDDSFFDV 286 (467)
T ss_dssp TCCSSCEEEEECSGGGHHH
T ss_pred cCCCCceEEEecChhHHHH
Confidence 98887899988877 4443
No 196
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=99.69 E-value=5.4e-17 Score=146.80 Aligned_cols=196 Identities=9% Similarity=-0.004 Sum_probs=129.1
Q ss_pred cCceecCCCCCCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEe-CCChH-H
Q 023191 47 KGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQS-LSGSP-S 124 (286)
Q Consensus 47 ~~i~L~~~e~~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~-~sG~~-a 124 (286)
..+++.++..++|+.+++++.+...... +. .++ .....++.+++++++++++|++.++ +|++ |+|++ +
T Consensus 40 ~~~~~~~~~~~~~~~v~~a~~~~~~~~~--~~--~~~---~~~~~~~~~~~~~~la~~~g~~~~~---~i~~~t~g~t~a 109 (398)
T 2fyf_A 40 RDGRFGSGPSKVRLEQLQTLTTTAAALF--GT--SHR---QAPVKNLVGRVRSGLAELFSLPDGY---EVILGNGGATAF 109 (398)
T ss_dssp SSCBCCSSSCCCCHHHHHGGGTTTTTTT--TS--CTT---SHHHHHHHHHHHHHHHHHTTCCTTC---EEEEEETCHHHH
T ss_pred CCccccCCCCCCCHHHHHHHhhcCCCcc--Cc--CcC---CHHHHHHHHHHHHHHHHHhCCCCCc---eEEEeCCchhHH
Confidence 4678888888899999999977311100 00 011 1233456677889999999997422 5888 99999 8
Q ss_pred HHHHHHHhcCCC-CeEEeccCCCCcccCccccccccccccc--eeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEE
Q 023191 125 NFQVYTALLKPH-DRIMALDLPHGGHLSHGYQTDTKKISAV--SIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA 201 (286)
Q Consensus 125 ~~~~l~a~~~~G-d~Vl~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i 201 (286)
+.+++.++++|| +.| ....|... ... .+... |..++.++++ ++...+. .+++ +||+|++
T Consensus 110 l~~~~~~l~~~gv~~v--~~~~~~~~------~~~-~~~~~~~g~~~~~v~~~---~g~~~~~-----~i~~-~~~~v~~ 171 (398)
T 2fyf_A 110 WDAAAFGLIDKRSLHL--TYGEFSAK------FAS-AVSKNPFVGEPIIITSD---PGSAPEP-----QTDP-SVDVIAW 171 (398)
T ss_dssp HHHHHHHTCSSCEEEE--ECSHHHHH------HHH-HHHHCTTSCCCEEEECC---TTCCCCC-----CCCT-TCSEEEE
T ss_pred HHHHHHHhcCCCeEEE--eCCHHHHH------HHH-HHHHhCCCCceEEEecC---CCCCCCc-----cccC-CCCEEEE
Confidence 888999999998 443 22222110 000 11122 4455556543 2333332 1455 8999988
Q ss_pred c-CCC-CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCCcceEEEeCCCCCCCCCCc-eEEEEecchhhhh
Q 023191 202 G-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEIN 278 (286)
Q Consensus 202 ~-~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~g-G~l~~~~~~~~~~ 278 (286)
+ ++| +|...|+++|.++ +|+++|+|++|+.+....++ ..+|++++|+||+++++.| |++++++++.+..
T Consensus 172 ~~~~nptG~~~~~~~i~~~---~~~~vivD~a~~~~~~~~~~-----~~~di~~~s~sK~~~~~gg~g~l~~~~~~~~~l 243 (398)
T 2fyf_A 172 AHNETSTGVAVAVRRPEGS---DDALVVIDATSGAGGLPVDI-----AETDAYYFAPQKNFASDGGLWLAIMSPAALSRI 243 (398)
T ss_dssp ESEETTTTEECCCCCCTTC---C-CEEEEECTTTTTTSCCCG-----GGCSEEEECTTSTTCSCSSEEEEEECHHHHHHH
T ss_pred eCcCCCcceecchHHhhhh---cCCeEEEEeccccCCcccCc-----ccCcEEEEecCcccCCCCceEEEEECHHHHHHh
Confidence 7 555 7788888888776 89999999999877654322 2489999999999987756 9999998776543
No 197
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*
Probab=99.68 E-value=6e-16 Score=141.24 Aligned_cols=221 Identities=12% Similarity=0.021 Sum_probs=134.5
Q ss_pred cCceecCCCC-----CCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCC
Q 023191 47 KGLELIPSEN-----FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSG 121 (286)
Q Consensus 47 ~~i~L~~~e~-----~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG 121 (286)
..+++..+.. ..++++++++.+.+.... .++.. .|. .....++++.++++++++.+ +|++++|
T Consensus 44 ~ylD~~~~~~~~~lg~~~p~v~~a~~~~~~~~~--~~~~~-~~~-----~~~~~~l~~~la~~~~~~~~----~v~~~~g 111 (429)
T 1s0a_A 44 RLVDGMSSWWAAIHGYNHPQLNAAMKSQIDAMS--HVMFG-GIT-----HAPAIELCRKLVAMTPQPLE----CVFLADS 111 (429)
T ss_dssp EEEESSTTTTTCTTCBSCHHHHHHHHHHHHHCS--CCCCS-SEE-----CHHHHHHHHHHHHHSCTTCC----EEEEESS
T ss_pred EEEEcCccHhhccCCCCCHHHHHHHHHHHHhcc--ccccc-ccC-----CHHHHHHHHHHHHhCCCCCC----EEEEeCC
Confidence 3466665552 258999999998886522 11110 111 12334466788899987664 5999999
Q ss_pred hH-HHHHHHHHhc---C----CCCeEEeccCCCCcccCccccc------cccccccceeeeEEEecccC--CCCC-CCCH
Q 023191 122 SP-SNFQVYTALL---K----PHDRIMALDLPHGGHLSHGYQT------DTKKISAVSIFFETMPYRLN--ESTG-YIDY 184 (286)
Q Consensus 122 ~~-a~~~~l~a~~---~----~Gd~Vl~~~~~~~~~~~~~~~~------~~~~~~~~g~~~~~v~~~~~--~~~~-~~d~ 184 (286)
++ ++.++++++. + |||+|+++++.|.++....... ++.........+..++++.. .+.+ .+|+
T Consensus 112 gtea~~~ai~~~~~~~~~~g~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 191 (429)
T 1s0a_A 112 GSVAVEVAMKMALQYWQAKGEARQRFLTFRNGYHGDTFGAMSVCDPDNSMHSLWKGYLPENLFAPAPQSRMDGEWDERDM 191 (429)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCCCEEEEETTCCCCSSHHHHTTSCTTTTTGGGGTTTSCCCEEECCCCSBC-CCCCGGGG
T ss_pred HHHHHHHHHHHHHHHhcccCCCCCeEEEECCCCCCCchhhhhhcCCchhhcccccCCCCCceEeCCCcccccccchHHHH
Confidence 88 8876776543 2 6999999997776542211100 01010000012334543321 0123 5899
Q ss_pred HHHHHHhhh--cCCcEEEEcCC--C-CCCccC----HHHHHHHHHhcCCEEEEecccc-ccccccCCCCCCCC-cceEEE
Q 023191 185 DQLEKSATL--FRPKLIVAGAS--A-YARLYD----YERIRKVCNKQKAIMLADMAHI-SGLVAAGVIPSPFE-YADVVT 253 (286)
Q Consensus 185 e~l~~~i~~--~~tk~v~i~~~--n-~g~~~~----l~~I~~ia~~~~~~vivD~a~~-~g~~~~~~~~~~~~-~~D~v~ 253 (286)
++|++++++ .++++|+++|. | +|...+ +++|.++|++||+++|+|++|. +|..........+. ..|+++
T Consensus 192 ~~l~~~l~~~~~~~~~vi~~p~~~n~tG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~g~~g~~~~~~~~~~~~d~~t 271 (429)
T 1s0a_A 192 VGFARLMAAHRHEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKICDREGILLIADEIATGFGRTGKLFACEHAEIAPDILC 271 (429)
T ss_dssp HHHHHHHHHHTTTEEEEEECSSEECTTTCEEBCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEE
T ss_pred HHHHHHHHhCCCCEEEEEEeecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCcccchHHHhhhcCCCCCEEE
Confidence 999999874 26677777765 4 565565 9999999999999999999986 33221100000011 367775
Q ss_pred eCCCCCCCCC-Cc-eEEEEecchhhhhccC
Q 023191 254 TTTHKSLRGP-RG-AMIFFRKGVKEINKQG 281 (286)
Q Consensus 254 ~s~~K~l~gp-~g-G~l~~~~~~~~~~~~~ 281 (286)
++|+|+|+ .+ |++++++++.+..+++
T Consensus 272 --~sK~l~~G~~~iG~~~~~~~~~~~l~~~ 299 (429)
T 1s0a_A 272 --LGKALTGGTMTLSATLTTREVAETISNG 299 (429)
T ss_dssp --ECGGGGTSSSCCEEEEECHHHHHHHHTS
T ss_pred --ecccccCCCccceEEEeCHHHHHHhhcC
Confidence 45999875 44 9999998877666553
No 198
>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}
Probab=99.66 E-value=1.8e-17 Score=149.77 Aligned_cols=166 Identities=13% Similarity=0.062 Sum_probs=119.7
Q ss_pred HHHHHHHHHCCCCCCCcceeEEeCCChH-HHHHHHHHhcCC----CCeEEeccCCCCcccCccccccccccccceeeeEE
Q 023191 96 LCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLKP----HDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFET 170 (286)
Q Consensus 96 ~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l~a~~~~----Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 170 (286)
.+.+|++.. |++... ..++++|+| ++++++.+.+++ ||+|+++...|.+.+. ++.+.|..++.
T Consensus 121 l~ld~L~~~-G~~~~~---~~flVnGsTgg~lamilaa~r~~rpg~d~VIvpRn~HKSv~k--------AliL~Gl~Pv~ 188 (501)
T 3hl2_A 121 LVLDIIKLA-GVHTVA---NCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFK--------SMITAGFEPVV 188 (501)
T ss_dssp HHHHHHHHT-TCTTCC---EEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHH--------HHHHTTCEEEE
T ss_pred HHHHHHHHc-CCCCCC---cEEEECcHHHHHHHHHHHHcCcccCCCCEEEEecchHHHHHH--------HHHHcCCeEEE
Confidence 356777665 997532 577788998 666666666664 4999999988888776 45578887777
Q ss_pred EecccCCCCCCCCHHHHHHHhhhcCC--cEEEE-cCCCCC--CccCHHHHHHHHHhcCCEEEEeccccccccccC-CCCC
Q 023191 171 MPYRLNESTGYIDYDQLEKSATLFRP--KLIVA-GASAYA--RLYDYERIRKVCNKQKAIMLADMAHISGLVAAG-VIPS 244 (286)
Q Consensus 171 v~~~~~~~~~~~d~e~l~~~i~~~~t--k~v~i-~~~n~g--~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~-~~~~ 244 (286)
++...+.+...+|+++++++|+++.+ .++++ ++++++ ...++++|+++|++||++++||+||++...... +...
T Consensus 189 V~p~~d~~~~~id~e~le~aI~e~ga~~i~~V~~Ttt~y~p~~~ddI~eIaeIch~~gIpllVDeAhGah~~~~~~lp~s 268 (501)
T 3hl2_A 189 IENVLEGDELRTDLKAVEAKVQELGPDCILCIHSTTSCFAPRVPDRLEELAVICANYDIPHIVNNAYGVQSSKCMHLIQQ 268 (501)
T ss_dssp ECEEEETTEEEECHHHHHHHHHHHCGGGEEEEEEECSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTCTTCHHHHHHHHH
T ss_pred EeeeecccccCCCHHHHHHHHHhcCCCcEEEEEecCCCCCCcccccHHHHHHHHHHcCCeEEEeCcchhhhhhhhhhHHH
Confidence 76544544578999999999987532 23333 355554 568999999999999999999999876543221 1111
Q ss_pred CCC-c-ceEEEeCCCCCCCCCCce-EEEEecc
Q 023191 245 PFE-Y-ADVVTTTTHKSLRGPRGA-MIFFRKG 273 (286)
Q Consensus 245 ~~~-~-~D~v~~s~~K~l~gp~gG-~l~~~~~ 273 (286)
.+. | +|+++.|+||++..|-|| +++++++
T Consensus 269 A~~~GrAD~vVqS~HK~llvpIGG~ii~~~d~ 300 (501)
T 3hl2_A 269 GARVGRIDAFVQSLDKNFMVPVGGAIIAGFND 300 (501)
T ss_dssp HHHHSCCCEEEEEHHHHHCCCSSCEEEEESCH
T ss_pred HHhcCCCcEEEecccccceeecCceEEEeCCH
Confidence 112 4 999999999999999884 5556653
No 199
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.66 E-value=3.9e-16 Score=140.58 Aligned_cols=197 Identities=9% Similarity=0.011 Sum_probs=123.5
Q ss_pred CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-HHHHHHHHhcCC-
Q 023191 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLKP- 135 (286)
Q Consensus 58 ~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l~a~~~~- 135 (286)
.+|.+.+++.+.+.... +... . ...+... ++++++++++|.+ .+++++|++ ++.+++.++..+
T Consensus 53 ~~p~v~~a~~~~~~~~~---~~~~-~-~~~~~~~----~l~~~la~~~g~~------~v~~~~~gt~a~~~al~~~~~~~ 117 (392)
T 3ruy_A 53 RHPKIINALIDQANRVT---LTSR-A-FHSDQLG----PWYEKVAKLTNKE------MVLPMNTGAEAVETAIKTARRWA 117 (392)
T ss_dssp TCHHHHHHHHHHHTTCS---CCCT-T-SEETTHH----HHHHHHHHHHTCS------EEEEESSHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcc---cccc-c-cCCHHHH----HHHHHHHHhcCCC------EEEEeCcHHHHHHHHHHHHHHhh
Confidence 47999999988775521 1111 1 1122333 4557788888832 488888887 887777766543
Q ss_pred ---------CCeEEeccCCCCcccCccccc-----cccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEE
Q 023191 136 ---------HDRIMALDLPHGGHLSHGYQT-----DTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA 201 (286)
Q Consensus 136 ---------Gd~Vl~~~~~~~~~~~~~~~~-----~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i 201 (286)
||+|+++.+.|.+........ +..........+..+ +. .|+++|++++++ ++++|++
T Consensus 118 ~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~------~d~~~l~~~l~~-~~~~v~~ 188 (392)
T 3ruy_A 118 YDVKKVEANRAEIIVCEDNFHGRTMGAVSMSSNEEYKRGFGPMLPGIIVI--PY------GDLEALKAAITP-NTAAFIL 188 (392)
T ss_dssp HHTSCCCTTCCEEEEETTCCCCSSHHHHHTCSCTTTTTTCCSCCSSEEEE--CT------TCHHHHHHHCCT-TEEEEEE
T ss_pred hhccCCCCCCcEEEEEcCCcCCCCHhhhhccCChhhccccCCCCCCCeee--Cc------ccHHHHHHHhcc-CeEEEEE
Confidence 789999998886553211111 000000000001111 11 289999999986 8999999
Q ss_pred c-CCC-CCCccC----HHHHHHHHHhcCCEEEEecccc-ccccccCCCCCCCC-cceEEEeCCCCCCCC--CCceEEEEe
Q 023191 202 G-ASA-YARLYD----YERIRKVCNKQKAIMLADMAHI-SGLVAAGVIPSPFE-YADVVTTTTHKSLRG--PRGAMIFFR 271 (286)
Q Consensus 202 ~-~~n-~g~~~~----l~~I~~ia~~~~~~vivD~a~~-~g~~~~~~~~~~~~-~~D~v~~s~~K~l~g--p~gG~l~~~ 271 (286)
+ ++| +|...| +++|.++|++||+++|+|++|+ ++............ ..|++++| |+++| .++|+++++
T Consensus 189 ~~~~nptG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~d~~~~S--K~l~gG~~~~G~~~~~ 266 (392)
T 3ruy_A 189 EPIQGEAGINIPPAGFLKEALEVCKKENVLFVADEIQTGLGRTGKVFACDWDNVTPDMYILG--KALGGGVFPISCAAAN 266 (392)
T ss_dssp CSSBSTTTSBCCCTTHHHHHHHHHHTTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEEC--GGGGTTTSCCEEEEEC
T ss_pred eCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCccccchhhhccCCCCCEEEEc--hhhhCChhhhEEEEEC
Confidence 7 555 677777 9999999999999999999985 22111101000001 26787664 99977 577999999
Q ss_pred cchhhhhcc
Q 023191 272 KGVKEINKQ 280 (286)
Q Consensus 272 ~~~~~~~~~ 280 (286)
+++.+..+.
T Consensus 267 ~~~~~~~~~ 275 (392)
T 3ruy_A 267 RDILGVFEP 275 (392)
T ss_dssp HHHHTTCCT
T ss_pred HHHHhhhcc
Confidence 887766554
No 200
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}
Probab=99.66 E-value=8.7e-16 Score=139.94 Aligned_cols=211 Identities=13% Similarity=0.070 Sum_probs=130.2
Q ss_pred cCceecCCC--CC---C-CHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCC-CCCcceeEEeC
Q 023191 47 KGLELIPSE--NF---T-SVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLD-PEKWGVNVQSL 119 (286)
Q Consensus 47 ~~i~L~~~e--~~---~-~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~-~~~~~~~v~~~ 119 (286)
..+++..+. ++ . ++++++++.+.+.... .+... .|. .....++++.+++++|++ ++ +|+++
T Consensus 43 ~~lD~~~~~~~~~lG~~~~p~v~~a~~~~~~~~~--~~~~~-~~~-----~~~~~~l~~~la~~~~~~~~~----~v~~~ 110 (419)
T 2eo5_A 43 KYLDFTSGIGVNNLGWPSHPEVIKIGIEQMQKLA--HAAAN-DFY-----NIPQLELAKKLVTYSPGNFQK----KVFFS 110 (419)
T ss_dssp EEEESSGGGGTTTTCBSCCHHHHHHHHHHHTTSC--CCSCS-CSC-----CHHHHHHHHHHHHHSSCSSCE----EEEEE
T ss_pred EEEEccCChhhhccCCCCCHHHHHHHHHHHhhCc--ccccc-ccC-----CHHHHHHHHHHHHhCCCCcCC----EEEEe
Confidence 356776555 22 2 7999999998886521 11111 111 233445668899999987 43 59999
Q ss_pred CChH-HHHHHHHHhcC-CCCeEEeccCCCCcccCcccc------ccccccccceeeeEEEecccCCCCCC----------
Q 023191 120 SGSP-SNFQVYTALLK-PHDRIMALDLPHGGHLSHGYQ------TDTKKISAVSIFFETMPYRLNESTGY---------- 181 (286)
Q Consensus 120 sG~~-a~~~~l~a~~~-~Gd~Vl~~~~~~~~~~~~~~~------~~~~~~~~~g~~~~~v~~~~~~~~~~---------- 181 (286)
+|++ ++..+++++.. +||+|+++++.|++....... .++.+.......++.+|++ +++.
T Consensus 111 ~gg~ea~~~ai~~~~~~~~~~vi~~~p~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~---~~~~~~~g~~~~~~ 187 (419)
T 2eo5_A 111 NSGTEAIEASIKVVKNTGRKYIIAFLGGFHGRTFGSISLTASKAVQRSIVGPFMPGVIHVPYP---NPYRNPWHINGYEN 187 (419)
T ss_dssp SSHHHHHHHHHHHHHTTSCCEEEEETTCCCCSSHHHHHHCCSCGGGGCSSCCCCTTEEEECCC---CSSSCTTCCCTTTC
T ss_pred CchHHHHHHHHHHHHHhhCCcEEEECCCcCCCCHhhHhhcCCccccccccCCCCCCCEEECCC---cccccccccccccc
Confidence 9988 88877776543 499999999777654321110 1111111111124445532 2222
Q ss_pred ------CCHHHHH-HHhhh----cCCcEEEEcCCC--CCCccC----HHHHHHHHHhcCCEEEEecccc-ccccccCCCC
Q 023191 182 ------IDYDQLE-KSATL----FRPKLIVAGASA--YARLYD----YERIRKVCNKQKAIMLADMAHI-SGLVAAGVIP 243 (286)
Q Consensus 182 ------~d~e~l~-~~i~~----~~tk~v~i~~~n--~g~~~~----l~~I~~ia~~~~~~vivD~a~~-~g~~~~~~~~ 243 (286)
+|+++|+ +.+++ .++++|+++|.| +|...+ +++|.++|++||+++|+|++|. +|.... ...
T Consensus 188 ~~~~~~~~~~~l~~~~i~~~~~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~DE~~~~~g~~g~-~~~ 266 (419)
T 2eo5_A 188 PSELVNRVIEFIEDYIFVNLVPPEEVAGIFFEPIQGEGGYVIPPKNFFAELQKLAKKYGILLVDDEVQMGLGRTGK-LFA 266 (419)
T ss_dssp HHHHHHHHHHHHHHTHHHHTCCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSS-SSG
T ss_pred chhhHHHHHHHHHHHHHhhccCCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCcc-hhh
Confidence 4689999 88874 266777777654 465555 9999999999999999999986 332211 000
Q ss_pred CC-CC-cceEEEeCCCCCCCCC-Cc-eEEEEecchh
Q 023191 244 SP-FE-YADVVTTTTHKSLRGP-RG-AMIFFRKGVK 275 (286)
Q Consensus 244 ~~-~~-~~D~v~~s~~K~l~gp-~g-G~l~~~~~~~ 275 (286)
.. +. ..|++ +++|+|+++ -. |++++++++.
T Consensus 267 ~~~~~~~~d~~--t~sK~~~~G~~riG~~~~~~~~~ 300 (419)
T 2eo5_A 267 IENFNTVPDVI--TLAKALGGGIMPIGATIFRKDLD 300 (419)
T ss_dssp GGGGTCCCSEE--EECGGGGTTTSCCEEEEEEGGGC
T ss_pred HHhcCCCCCEE--EecccccCCccceEEEEEchHhh
Confidence 00 01 25666 566998764 33 9999998866
No 201
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=99.62 E-value=3.2e-15 Score=135.99 Aligned_cols=208 Identities=13% Similarity=0.006 Sum_probs=126.5
Q ss_pred CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-HHHHHHH---Hhc
Q 023191 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYT---ALL 133 (286)
Q Consensus 58 ~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l~---a~~ 133 (286)
+++.+++++.+.+.... +... .|.......+++ +.++++++.+.. .+|++++|++ ++.+++. ++.
T Consensus 58 ~~~~v~~a~~~~~~~~~---~~~~-~~~~~~~~~~l~----~~la~~~~~~~~---~~v~~~~g~~~a~~~~~~~a~~~~ 126 (426)
T 1sff_A 58 LHPKVVAAVEAQLKKLS---HTCF-QVLAYEPYLELC----EIMNQKVPGDFA---KKTLLVTTGSEAVENAVKIARAAT 126 (426)
T ss_dssp TCHHHHHHHHHHTTTCS---CCCT-TTEECHHHHHHH----HHHHHHSSCSSC---EEEEEESSHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhCC---Cccc-cccCCHHHHHHH----HHHHHhCCcccc---cEEEEeCchHHHHHHHHHHHHHhh
Confidence 68999999998875421 1111 123334444444 677777732221 2699999999 8877776 677
Q ss_pred CCCCeEEeccCCCCcccCccccc------cccccccceeeeEEEecccC--CCCCCCCHHHHHHHhhh----cCCcEEEE
Q 023191 134 KPHDRIMALDLPHGGHLSHGYQT------DTKKISAVSIFFETMPYRLN--ESTGYIDYDQLEKSATL----FRPKLIVA 201 (286)
Q Consensus 134 ~~Gd~Vl~~~~~~~~~~~~~~~~------~~~~~~~~g~~~~~v~~~~~--~~~~~~d~e~l~~~i~~----~~tk~v~i 201 (286)
++| +|+++++.|.+........ ++.........++.++++.+ ..++.+|+++|++++++ .++++|++
T Consensus 127 ~~~-~vi~~~p~y~~~~~~~~~~~g~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~v~~ 205 (426)
T 1sff_A 127 KRS-GTIAFSGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGISEDDAIASIHRIFKNDAAPEDIAAIVI 205 (426)
T ss_dssp TCC-EEEEETTCCCCSSHHHHHHSSCCTTTTTTSCCCCSSEEEECCCBGGGTBCHHHHHHHHHHHHHHTCCGGGEEEEEE
T ss_pred CCC-eEEEECCCcCCCchHhhhhcCCccccccccCCCCCCcEEeCCCccccccchHHHHHHHHHHHHhccCCCceEEEEE
Confidence 887 8889887776543211100 00000000001344554321 01235799999999873 37788888
Q ss_pred c--CCCCCCccC----HHHHHHHHHhcCCEEEEeccccccccccCC-CC-CCCC-cceEEEeCCCCCCCC-CCceEEEEe
Q 023191 202 G--ASAYARLYD----YERIRKVCNKQKAIMLADMAHISGLVAAGV-IP-SPFE-YADVVTTTTHKSLRG-PRGAMIFFR 271 (286)
Q Consensus 202 ~--~~n~g~~~~----l~~I~~ia~~~~~~vivD~a~~~g~~~~~~-~~-~~~~-~~D~v~~s~~K~l~g-p~gG~l~~~ 271 (286)
+ ++|+|...+ +++|.++|++||+++|+|++|+ |....+. .. .... ..|++ |++|+|++ .+.|+++++
T Consensus 206 ~p~~~ntG~~~~~~~~l~~l~~l~~~~~~~li~De~~~-~~~~~g~~~~~~~~~~~~di~--s~sK~~~~GlriG~~~~~ 282 (426)
T 1sff_A 206 EPVQGEGGFYASSPAFMQRLRALCDEHGIMLIADEVQS-GAGRTGTLFAMEQMGVAPDLT--TFAKSIAGGFPLAGVTGR 282 (426)
T ss_dssp CSBCTTTTSCBCCHHHHHHHHHHHHHHTCEEEEECTTT-TTTTTSSSSGGGGTTSCCSEE--EECGGGGTSSCCEEEEEE
T ss_pred ecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEechhh-ccCcccchhhhhhcCCCCCEE--EEcccccCCCceEEEEEc
Confidence 5 456775666 9999999999999999999987 4322111 10 0011 26665 66799864 223999999
Q ss_pred cchhhhhcc
Q 023191 272 KGVKEINKQ 280 (286)
Q Consensus 272 ~~~~~~~~~ 280 (286)
+++.+..+.
T Consensus 283 ~~~~~~l~~ 291 (426)
T 1sff_A 283 AEVMDAVAP 291 (426)
T ss_dssp HHHHTTSCT
T ss_pred HHHHhhhcc
Confidence 887766654
No 202
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=99.62 E-value=1.3e-15 Score=137.69 Aligned_cols=197 Identities=15% Similarity=0.171 Sum_probs=124.4
Q ss_pred CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-HHHHHHHHhcC--
Q 023191 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLK-- 134 (286)
Q Consensus 58 ~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l~a~~~-- 134 (286)
.++.+.+++.+.+..... +. ..+ .. ....++++++++++|.+ +|++++|++ ++.+++.++..
T Consensus 56 ~~p~v~~a~~~~~~~~~~--~~--~~~-~~----~~~~~l~~~la~~~~~~------~v~~~~gg~~a~~~al~~~~~~~ 120 (406)
T 4adb_A 56 AHPELREALNEQASKFWH--TG--NGY-TN----EPVLRLAKKLIDATFAD------RVFFCNSGAEANEAALKLARKFA 120 (406)
T ss_dssp TCHHHHHHHHHHHTTCSC--CC--TTS-CC----HHHHHHHHHHHHHSSCS------EEEEESSHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhccc--cc--CCc-CC----HHHHHHHHHHHhhCCCC------eEEEeCcHHHHHHHHHHHHHHHH
Confidence 489999999888765221 11 111 11 23445668888888765 388888888 88878887764
Q ss_pred -----CC-CeEEeccCCCCcccCccccccccc-----cccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEcC
Q 023191 135 -----PH-DRIMALDLPHGGHLSHGYQTDTKK-----ISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGA 203 (286)
Q Consensus 135 -----~G-d~Vl~~~~~~~~~~~~~~~~~~~~-----~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~~ 203 (286)
+| |+|+++++.|.++........... ..-.+..+..++ ..|+++|++++++ ++++|+++|
T Consensus 121 ~~~~~~g~~~vi~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~d~~~l~~~l~~-~~~~v~~~p 191 (406)
T 4adb_A 121 HDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPAYSQDFAPLPADIRHAA--------YNDINSASALIDD-STCAVIVEP 191 (406)
T ss_dssp HHHTCTTCCEEEEETTCCCCSSHHHHHHSSCGGGTGGGCSCCSSEEEEC--------TTCHHHHHTTCST-TEEEEEECS
T ss_pred HhcCCCCCcEEEEECCCcCCCcHHHhhccCCccccccCCCCCCCceEeC--------CCcHHHHHHHhcC-CeEEEEEeC
Confidence 66 999999987776532111110000 000001121121 1489999999986 899999986
Q ss_pred CC-CCCc-----cCHHHHHHHHHhcCCEEEEeccccccccccCCCC--CCCC-cceEEEeCCCCCCCCC-CceEEEEecc
Q 023191 204 SA-YARL-----YDYERIRKVCNKQKAIMLADMAHISGLVAAGVIP--SPFE-YADVVTTTTHKSLRGP-RGAMIFFRKG 273 (286)
Q Consensus 204 ~n-~g~~-----~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~--~~~~-~~D~v~~s~~K~l~gp-~gG~l~~~~~ 273 (286)
+| +|.. .++++|.++|++||+++|+|++|+ |....+... ..+. ..|+++ ++|+|++. +.|+++++++
T Consensus 192 ~np~g~~~~~~~~~l~~l~~l~~~~~~~li~De~~~-~~~~~g~~~~~~~~~~~~d~~t--~sK~~~~G~r~G~~~~~~~ 268 (406)
T 4adb_A 192 IQGEGGVVPASNAFLQGLRELCNRHNALLIFDEVQT-GVGRTGELYAYMHYGVTPDLLT--TAKALGGGFPVGALLATEE 268 (406)
T ss_dssp EETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTT-TTTTTSSSSHHHHHTCCCSEEE--ECGGGGTTSCCEEEEECHH
T ss_pred CcCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CCCccchhHHHHhcCCCCCEEE--echhhcCCCCeEEEEEcHH
Confidence 55 4433 368999999999999999999986 332111100 0001 257774 49998633 4599999988
Q ss_pred hhhhhccC
Q 023191 274 VKEINKQG 281 (286)
Q Consensus 274 ~~~~~~~~ 281 (286)
+.+..++.
T Consensus 269 ~~~~~~~~ 276 (406)
T 4adb_A 269 CARVMTVG 276 (406)
T ss_dssp HHHTCCTT
T ss_pred HHhhhccC
Confidence 87666543
No 203
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=99.61 E-value=7.1e-15 Score=132.53 Aligned_cols=208 Identities=13% Similarity=0.096 Sum_probs=126.9
Q ss_pred CceecCC--CCC---CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCCh
Q 023191 48 GLELIPS--ENF---TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS 122 (286)
Q Consensus 48 ~i~L~~~--e~~---~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~ 122 (286)
.+++..+ .++ .+|++++++.+.+.... .++ . .+ .....+++++++++++|.+ .|++++|+
T Consensus 38 ~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~-~~~--~-~~-----~~~~~~~l~~~la~~~~~~------~v~~~~gg 102 (395)
T 3nx3_A 38 YLDFSSGIGVCALGYNHAKFNAKIKAQVDKLL-HTS--N-LY-----YNENIAAAAKNLAKASALE------RVFFTNSG 102 (395)
T ss_dssp EEESSHHHHTCTTCBSCHHHHHHHHHHHTTCS-CCC--T-TS-----BCHHHHHHHHHHHHHHTCS------EEEEESSH
T ss_pred EEECCCcHHhccCCCCCHHHHHHHHHHHHhcc-ccc--c-cc-----CCHHHHHHHHHHHHhcCCC------eEEEeCCH
Confidence 4666544 222 47999999998876521 111 1 11 1244455668888888732 48888888
Q ss_pred H-HHHHHHHHhc-------CCCCeEEeccCCCCcccCcccc-----ccccccccceeeeEEEecccCCCCCCCCHHHHHH
Q 023191 123 P-SNFQVYTALL-------KPHDRIMALDLPHGGHLSHGYQ-----TDTKKISAVSIFFETMPYRLNESTGYIDYDQLEK 189 (286)
Q Consensus 123 ~-a~~~~l~a~~-------~~Gd~Vl~~~~~~~~~~~~~~~-----~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~ 189 (286)
+ ++..++.++. .+||+|+++++.|.+....... .+.......+..+..++ . .|+++|++
T Consensus 103 ~ea~~~al~~~~~~~~~~g~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~------~d~~~l~~ 174 (395)
T 3nx3_A 103 TESIEGAMKTARKYAFNKGVKGGQFIAFKHSFHGRTLGALSLTANEKYQKPFKPLISGVKFAK--Y------NDISSVEK 174 (395)
T ss_dssp HHHHHHHHHHHHHHHHHTTCTTCEEEEETTCCCCSSHHHHTTCCCHHHHGGGCSCCSCEEEEC--T------TCHHHHHT
T ss_pred HHHHHHHHHHHHHHhhccCCCCCEEEEEcCCcCCCCHHHHhhcCCcccccccCCCCCCcEEeC--C------CCHHHHHH
Confidence 8 8887777664 5689999999887665311110 01101111111122222 1 27999999
Q ss_pred HhhhcCCcEEEEcCC-C-CCCccC----HHHHHHHHHhcCCEEEEecccc-ccccccCCCCCCCC-cceEEEeCCCCCCC
Q 023191 190 SATLFRPKLIVAGAS-A-YARLYD----YERIRKVCNKQKAIMLADMAHI-SGLVAAGVIPSPFE-YADVVTTTTHKSLR 261 (286)
Q Consensus 190 ~i~~~~tk~v~i~~~-n-~g~~~~----l~~I~~ia~~~~~~vivD~a~~-~g~~~~~~~~~~~~-~~D~v~~s~~K~l~ 261 (286)
++++ ++++|++.+. | .|...+ +++|.++|++||+++|+|++|+ +|..........+. ..|++++ +|+|+
T Consensus 175 ~l~~-~~~~v~~~~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~~~~~~~~~~~~d~~t~--sK~~~ 251 (395)
T 3nx3_A 175 LVNE-KTCAIILESVQGEGGINPANKDFYKALRKLCDEKDILLIADEIQCGMGRSGKFFAYEHAQILPDIMTS--AKALG 251 (395)
T ss_dssp TCCT-TEEEEEEESEECTTSCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEE--CGGGT
T ss_pred hccC-CeEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCCcCCcchhHHhcCCCCCEEEe--ccccc
Confidence 9976 7888888633 3 455555 9999999999999999999976 32221100000001 2566654 59886
Q ss_pred CC-CceEEEEecch-hhhhccC
Q 023191 262 GP-RGAMIFFRKGV-KEINKQG 281 (286)
Q Consensus 262 gp-~gG~l~~~~~~-~~~~~~~ 281 (286)
++ +.|++++++++ .+..++.
T Consensus 252 ~G~~~G~~~~~~~~~~~~~~~~ 273 (395)
T 3nx3_A 252 CGLSVGAFVINQKVASNSLEAG 273 (395)
T ss_dssp TTSCCEEEEECHHHHHHHSCTT
T ss_pred CCCceEEEEEchhhhhhhcCCc
Confidence 54 44999999988 7666543
No 204
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*
Probab=99.61 E-value=4.8e-16 Score=140.50 Aligned_cols=202 Identities=11% Similarity=-0.032 Sum_probs=124.7
Q ss_pred cCceecCCCCC--CCHHHHHHhccccccCCCCCCCCCcccCCcchH-----HHHHHHHHHHHHHHCCCCCCCcceeEEeC
Q 023191 47 KGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYI-----DMAESLCQKRALEAFRLDPEKWGVNVQSL 119 (286)
Q Consensus 47 ~~i~L~~~e~~--~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~-----~~l~~~~~~~~~~~~g~~~~~~~~~v~~~ 119 (286)
+.|+|..+++. +++.+.+++.+.+... .......|+...+. .++++++.+++. ..|++.+. ..+|++|
T Consensus 23 ~~i~l~~g~p~~~~~~~~~~~~~~~~~~~---~~~~~~~Y~~~~G~~~~~~~~lr~aia~~~~-~~g~~~~~-~~~i~~t 97 (391)
T 3bwn_A 23 FVVNLDHGDPTAYEEYWRKMGDRCTVTIR---GCDLMSYFSDMTNLCWFLEPELEDAIKDLHG-VVGNAATE-DRYIVVG 97 (391)
T ss_dssp SCEECSSCCCGGGHHHHHHTGGGSCEEEC---TTTTCSSCSCTTSSSTTSCHHHHHHHHHHHH-HHCSBCCS-SSEEEEE
T ss_pred CeeEcCCCCCCCCCCHHHHHhHHHHhhcC---ccchhhcCCCCCCcccccCHHHHHHHHHHHH-hcCCCCCC-CCeEEEe
Confidence 56899888874 3445666654333211 01112234555665 889988888876 44653211 0269999
Q ss_pred CChH-HHHHHHHHhcCCCC----eEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhc
Q 023191 120 SGSP-SNFQVYTALLKPHD----RIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF 194 (286)
Q Consensus 120 sG~~-a~~~~l~a~~~~Gd----~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~ 194 (286)
+|++ ++.+++.++++||| +|++++|.|.++ ...+...|.+++.+++ +.++.. .+
T Consensus 98 ~G~~~al~~~~~~l~~~Gd~~~~~Vlv~~P~y~~~--------~~~~~~~g~~~~~~~~--d~~~l~----------~~- 156 (391)
T 3bwn_A 98 TGSTQLCQAAVHALSSLARSQPVSVVAAAPFYSTY--------VEETTYVRSGMYKWEG--DAWGFD----------KK- 156 (391)
T ss_dssp EHHHHHHHHHHHHHHHTSSSSSEEEEECSSCCTHH--------HHHHHTTCBTTEEEEE--ESTTCC----------CC-
T ss_pred CChHHHHHHHHHHhcCCCCCCcceEEEcCCCchhH--------HHHHHHcCCeEEEecC--CHHHcC----------CC-
Confidence 9999 88879999999999 999999555544 3344566666655553 322222 13
Q ss_pred CCcEEEEc-CCC-CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCCcceEEEeCCCCCCC--CCCceEEEE
Q 023191 195 RPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLR--GPRGAMIFF 270 (286)
Q Consensus 195 ~tk~v~i~-~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~--gp~gG~l~~ 270 (286)
++|+|+++ |+| +|...+ +|++.++.++++||+|++|+.+... .+. . ....++++.|+||+|+ |.+.|++++
T Consensus 157 ~~k~v~l~~p~NPtG~~~~--~l~~~~~~~~~~ii~De~y~~~~~~-~l~-~-~~~~~i~~~S~SK~~g~~GlRiG~~~~ 231 (391)
T 3bwn_A 157 GPYIELVTSPNNPDGTIRE--TVVNRPDDDEAKVIHDFAYYWPHYT-PIT-R-RQDHDIMLFTFSKITGHAGSRIGWALV 231 (391)
T ss_dssp SCEEEEEESSCTTTCCCCC--CCC-----CCCEEEEECTTCSTTTS-CCC-C-CBCCSEEEEEHHHHHSCGGGCEEEEEE
T ss_pred CCEEEEECCCCCCCchhHH--HHHHHhhcCCCEEEEeCCCCCCCCC-ccc-c-CCCCeEEEEechhhcCCCccceEEEEe
Confidence 78999887 776 776654 4444222233999999998742110 111 0 1136799999999874 445599998
Q ss_pred -ecchhhhhc
Q 023191 271 -RKGVKEINK 279 (286)
Q Consensus 271 -~~~~~~~~~ 279 (286)
++++.+.++
T Consensus 232 ~~~~l~~~l~ 241 (391)
T 3bwn_A 232 KDKEVAKKMV 241 (391)
T ss_dssp CCHHHHHHHH
T ss_pred cCHHHHHHHH
Confidence 667665544
No 205
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=99.60 E-value=3.6e-15 Score=136.79 Aligned_cols=197 Identities=13% Similarity=0.150 Sum_probs=120.8
Q ss_pred CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-HHHHHHHHhc---
Q 023191 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALL--- 133 (286)
Q Consensus 58 ~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l~a~~--- 133 (286)
.+|.+++++.+.+.... +... .| ..+...+ +++++++++|.+ .|++++|++ ++.+++.++.
T Consensus 93 ~~p~v~~Ai~~~~~~~~---~~~~-~~-~~~~~~~----l~~~la~~~g~~------~v~~~~sGseA~~~al~~~~~~~ 157 (439)
T 2oat_A 93 CHPKIVNALKSQVDKLT---LTSR-AF-YNNVLGE----YEEYITKLFNYH------KVLPMNTGVEAGETACKLARKWG 157 (439)
T ss_dssp TCHHHHHHHHHHHTTCS---CCCT-TS-EESSHHH----HHHHHHHHHTCS------EEEEESSHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcC---cccC-cc-CCHHHHH----HHHHHHHhcCCC------EEEEeCCHHHHHHHHHHHHHHHh
Confidence 67999999998876521 1111 12 1223344 446677777743 488888777 8887777654
Q ss_pred ------CCC-CeEEeccCCCCcccCccccccc-----cccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEE
Q 023191 134 ------KPH-DRIMALDLPHGGHLSHGYQTDT-----KKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA 201 (286)
Q Consensus 134 ------~~G-d~Vl~~~~~~~~~~~~~~~~~~-----~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i 201 (286)
.+| |+|+++++.|.+.......... .+..-....+..+| . .|++++++.++..++++|++
T Consensus 158 ~~~~g~~~g~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~~--~------~d~~~le~~l~~~~~~~vi~ 229 (439)
T 2oat_A 158 YTVKGIQKYKAKIVFAAGNFWGRTLSAISSSTDPTSYDGFGPFMPGFDIIP--Y------NDLPALERALQDPNVAAFMV 229 (439)
T ss_dssp HHTTCCCTTCCEEEEETTCCCCSSHHHHTTCCCHHHHTTSCSCCTTEEEEC--S------SCHHHHHHHTTSTTEEEEEE
T ss_pred hhccCCCCCCCeEEEEcCCCCCCCHhHhhcCCChhcccCCCCCCCCeEEeC--C------CCHHHHHHHhCCCCEEEEEE
Confidence 467 8999999777654321110000 00000001122232 2 28999999995337888888
Q ss_pred cCCC--CCCcc----CHHHHHHHHHhcCCEEEEeccccccccccCC-CC-CCCC-cceEEEeCCCCCCCCC--CceEEEE
Q 023191 202 GASA--YARLY----DYERIRKVCNKQKAIMLADMAHISGLVAAGV-IP-SPFE-YADVVTTTTHKSLRGP--RGAMIFF 270 (286)
Q Consensus 202 ~~~n--~g~~~----~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~-~~-~~~~-~~D~v~~s~~K~l~gp--~gG~l~~ 270 (286)
+|.+ +|... ++++|.++|++||+++|+|++|. |....+. .. ..+. ..|++ +++|+|++. ++|++++
T Consensus 230 ep~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~-g~g~~g~~~~~~~~~~~~Di~--t~sK~l~~G~~~~G~v~~ 306 (439)
T 2oat_A 230 EPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQT-GLARTGRWLAVDYENVRPDIV--LLGKALSGGLYPVSAVLC 306 (439)
T ss_dssp CSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTT-TTTTTSSSSGGGGGTCCCSEE--EECGGGGTTSSCCEEEEE
T ss_pred ECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-CCccCCcchhHHHhCCCCcEE--EecccccCCCCCeEEEEE
Confidence 7543 46444 69999999999999999999984 4321111 00 0011 26876 667999764 5799999
Q ss_pred ecchhhhhcc
Q 023191 271 RKGVKEINKQ 280 (286)
Q Consensus 271 ~~~~~~~~~~ 280 (286)
++++.+..+.
T Consensus 307 ~~~~~~~l~~ 316 (439)
T 2oat_A 307 DDDIMLTIKP 316 (439)
T ss_dssp CHHHHTTSCT
T ss_pred CHHHHhccCC
Confidence 9887766654
No 206
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=99.59 E-value=4.7e-15 Score=133.84 Aligned_cols=187 Identities=14% Similarity=0.128 Sum_probs=121.0
Q ss_pred CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-HHHHHHHHhcC--
Q 023191 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLK-- 134 (286)
Q Consensus 58 ~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l~a~~~-- 134 (286)
.++.+++++.+.+.... .... .| ..++.+++++.+++++|.+ +|++++|++ ++.+++.++..
T Consensus 57 ~~~~v~~a~~~~~~~~~---~~~~-~~-----~~~~~~~l~~~la~~~g~~------~v~~~~gg~~a~~~al~~~~~~~ 121 (397)
T 2ord_A 57 SHPRLVEAIKDQAEKLI---HCSN-LF-----WNRPQMELAELLSKNTFGG------KVFFANTGTEANEAAIKIARKYG 121 (397)
T ss_dssp TCHHHHHHHHHHHHHCS---CCCT-TS-----EEHHHHHHHHHHHHTTTSC------EEEEESSHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcc---cCcc-cc-----CCHHHHHHHHHHHHhcCCC------eEEEeCCHHHHHHHHHHHHHHHh
Confidence 58999999998876521 1111 11 1234455668888888842 488888888 88777777753
Q ss_pred ----C-CCeEEeccCCCCcccCccccccccccccceee------------eEEEecccCCCCCCCCHHHHHHHhhhcCCc
Q 023191 135 ----P-HDRIMALDLPHGGHLSHGYQTDTKKISAVSIF------------FETMPYRLNESTGYIDYDQLEKSATLFRPK 197 (286)
Q Consensus 135 ----~-Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~------------~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk 197 (286)
+ +++|+++++.|.+..... +...|.. +..++ . .|+++|++.+++ +++
T Consensus 122 ~~~~~~~~~vi~~~~~yh~~~~~~-------~~~~g~~~~~~~~~p~~~~~~~~~--~------~d~~~l~~~l~~-~~~ 185 (397)
T 2ord_A 122 KKKSEKKYRILSAHNSFHGRTLGS-------LTATGQPKYQKPFEPLVPGFEYFE--F------NNVEDLRRKMSE-DVC 185 (397)
T ss_dssp HHHCTTCCEEEEEBTCCCCSSHHH-------HHHSBCHHHHGGGCSCCTTEEEEC--T------TCHHHHHHHCCT-TEE
T ss_pred hcCCCCCceEEEEcCCcCCCchhh-------hhccCChhhccccCCCCCCeeEec--C------CCHHHHHHHhhc-CeE
Confidence 5 578998887665432211 1122211 22222 2 289999999987 899
Q ss_pred EEEEc-CCC-CCC----ccCHHHHHHHHHhcCCEEEEeccccccccccCCCC--CCCC-cceEEEeCCCCCCCCC-CceE
Q 023191 198 LIVAG-ASA-YAR----LYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIP--SPFE-YADVVTTTTHKSLRGP-RGAM 267 (286)
Q Consensus 198 ~v~i~-~~n-~g~----~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~--~~~~-~~D~v~~s~~K~l~gp-~gG~ 267 (286)
+|+++ ++| +|. ..++++|.++|++||+++|+|++|+ |....+... ..+. ..|++ +++|+|+++ +.|+
T Consensus 186 ~v~~~~~~nptG~~~~~~~~l~~l~~l~~~~~~~li~De~~~-~~~~~g~~~~~~~~~~~~d~~--s~sK~~~~G~r~G~ 262 (397)
T 2ord_A 186 AVFLEPIQGESGIVPATKEFLEEARKLCDEYDALLVFDEVQC-GMGRTGKLFAYQKYGVVPDVL--TTAKGLGGGVPIGA 262 (397)
T ss_dssp EEEECSEECTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTT-TTTTTSSSSHHHHHTCCCSEE--EECGGGGTTSCCEE
T ss_pred EEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEeccc-CCccCccchhhhhhCCCCCee--eeccccCCCcCeEE
Confidence 99998 444 565 3578999999999999999999986 433222110 0001 26776 447999754 3499
Q ss_pred EEEecchhhhhc
Q 023191 268 IFFRKGVKEINK 279 (286)
Q Consensus 268 l~~~~~~~~~~~ 279 (286)
+++++++. ..+
T Consensus 263 ~~~~~~~~-~l~ 273 (397)
T 2ord_A 263 VIVNERAN-VLE 273 (397)
T ss_dssp EEECSTTC-CCC
T ss_pred EEEchHhc-ccC
Confidence 99998875 444
No 207
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=99.59 E-value=1.3e-14 Score=132.82 Aligned_cols=197 Identities=15% Similarity=0.186 Sum_probs=116.9
Q ss_pred CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-HHHHHHHHhc---
Q 023191 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALL--- 133 (286)
Q Consensus 58 ~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l~a~~--- 133 (286)
.+|.+++++.+.+.... +... .+ . .+...++++.+++++|.+ +|++++|++ ++.+++.++.
T Consensus 82 ~~p~v~~ai~~~~~~~~---~~~~-~~-~----~~~~~~l~~~la~~~g~~------~v~~~~sGseA~~~al~~a~~~~ 146 (433)
T 1z7d_A 82 CHPNILNAMINQAKNLT---ICSR-AF-F----SVPLGICERYLTNLLGYD------KVLMMNTGAEANETAYKLCRKWG 146 (433)
T ss_dssp TCHHHHHHHHHHHTTCS---CCCT-TS-E----EHHHHHHHHHHHHHHTCS------EEEEESSHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhCC---CccC-Cc-C----CHHHHHHHHHHHhhcCCC------eEEEeCCHHHHHHHHHHHHHHHh
Confidence 68999999998876521 1111 11 1 233344557777777743 488888877 8887777643
Q ss_pred ------CCC-CeEEeccCCCCcccCccccccccccccce-----eeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEE
Q 023191 134 ------KPH-DRIMALDLPHGGHLSHGYQTDTKKISAVS-----IFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA 201 (286)
Q Consensus 134 ------~~G-d~Vl~~~~~~~~~~~~~~~~~~~~~~~~g-----~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i 201 (286)
.+| |+|+++++.|.+................+ ..+..+| . .|+++|++++...++++|++
T Consensus 147 ~~~~g~~~gr~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~~--~------~d~~~le~~l~~~~~~~vi~ 218 (433)
T 1z7d_A 147 YEVKKIPENMAKIVVCKNNFSGRTLGCISASTTKKCTSNFGPFAPQFSKVP--Y------DDLEALEEELKDPNVCAFIV 218 (433)
T ss_dssp HHTSCCCTTCCEEEEETTC--------------------------CEEEEC--T------TCHHHHHHHHTSTTEEEEEE
T ss_pred hhccCCCCCCCeEEEEeCCcCCcchhhhcccCCccccccCCCCCCCeEEeC--C------CCHHHHHHHhCCCCEEEEEE
Confidence 578 99999997776543211110000000000 1122222 1 38999999994237888888
Q ss_pred cCCC--CCCcc----CHHHHHHHHHhcCCEEEEeccccccccccCC-CC-CCCC-cceEEEeCCCCCCCCC--CceEEEE
Q 023191 202 GASA--YARLY----DYERIRKVCNKQKAIMLADMAHISGLVAAGV-IP-SPFE-YADVVTTTTHKSLRGP--RGAMIFF 270 (286)
Q Consensus 202 ~~~n--~g~~~----~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~-~~-~~~~-~~D~v~~s~~K~l~gp--~gG~l~~ 270 (286)
+|.+ +|... ++++|.++|++||+++|+|++|. |....+. .. ..+. ..|++ +++|+|++. ++|++++
T Consensus 219 ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~-g~g~~g~~~~~~~~~~~~di~--t~sK~l~~G~~~~G~v~~ 295 (433)
T 1z7d_A 219 EPIQGEAGVIVPSDNYLQGVYDICKKYNVLFVADEVQT-GLGRTGKLLCVHHYNVKPDVI--LLGKALSGGHYPISAVLA 295 (433)
T ss_dssp CSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTT-TTTTTSSSSGGGGGTCCCSEE--EECGGGGTTSSCCEEEEE
T ss_pred ECCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCcc-CCCcCCcchhhHhcCCCCCEE--EECccccCCCCCeEEEEE
Confidence 7443 46443 69999999999999999999985 4321111 00 0011 36776 567999764 5799999
Q ss_pred ecchhhhhcc
Q 023191 271 RKGVKEINKQ 280 (286)
Q Consensus 271 ~~~~~~~~~~ 280 (286)
++++.+..+.
T Consensus 296 ~~~~~~~l~~ 305 (433)
T 1z7d_A 296 NDDIMLVIKP 305 (433)
T ss_dssp CHHHHTTCCT
T ss_pred CHHHHhhhcc
Confidence 9887766654
No 208
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=99.59 E-value=1.1e-14 Score=133.12 Aligned_cols=218 Identities=12% Similarity=0.087 Sum_probs=130.3
Q ss_pred cCceecCCCC-----CCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCC
Q 023191 47 KGLELIPSEN-----FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSG 121 (286)
Q Consensus 47 ~~i~L~~~e~-----~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG 121 (286)
..+++..+.+ ..+|.+++++.+.+.... .+. ...+..++..+++++++++++...++ +|++++|
T Consensus 44 ~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~--~~~------~~~~~~~~~~~l~~~la~~~~~~~~~---~v~~~~g 112 (439)
T 3dxv_A 44 ELIDLSGAWGAASLGYGHPAIVAAVSAAAANPA--GAT------ILSASNAPAVTLAERLLASFPGEGTH---KIWFGHS 112 (439)
T ss_dssp EEEESSTTTTTCTTCBSCHHHHHHHHHHHHSCS--CSC------SSSSEEHHHHHHHHHHHHTTTCTTTE---EEEEESS
T ss_pred EEEECCCchhhccCCCCCHHHHHHHHHHHHhcc--Ccc------ccccCCHHHHHHHHHHHHhCCCCCCC---EEEEeCC
Confidence 3467765554 158999999988876521 121 11223355666778999988654421 4888888
Q ss_pred hH-HHHHHHHHh--cCCCCeEEeccCCCCcccCccccc-------cccccccceeeeEEEecccCCCCCCC-----CHHH
Q 023191 122 SP-SNFQVYTAL--LKPHDRIMALDLPHGGHLSHGYQT-------DTKKISAVSIFFETMPYRLNESTGYI-----DYDQ 186 (286)
Q Consensus 122 ~~-a~~~~l~a~--~~~Gd~Vl~~~~~~~~~~~~~~~~-------~~~~~~~~g~~~~~v~~~~~~~~~~~-----d~e~ 186 (286)
++ ++..++.++ ..+++.|+++++.|.+........ ++.........+..++ .+ ..+.. |+++
T Consensus 113 gsea~~~al~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~d~~~ 189 (439)
T 3dxv_A 113 GSDANEAAYRAIVKATGRSGVIAFAGAYHGCTVGSMAFSGHSVQADAAKADGLILLPYPDP--YR-PYRNDPTGDAILTL 189 (439)
T ss_dssp HHHHHHHHHHHHHHHHSCCEEEEETTCCCCSSHHHHCC-------------CEEEECCCCS--SS-CBTTBTTSHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCEEEEECCCCCCCcHHHHhhcCCCchhhccccCCCCCCcEEcC--CC-cccccccHHHHHHH
Confidence 88 888777765 446778888886665443211100 0000000000011122 11 11112 7999
Q ss_pred HHHHhh---hcCCcEEEEcCCC--CCCccC----HHHHHHHHHhcCCEEEEeccccccccccCC-CC-CCCC-cceEEEe
Q 023191 187 LEKSAT---LFRPKLIVAGASA--YARLYD----YERIRKVCNKQKAIMLADMAHISGLVAAGV-IP-SPFE-YADVVTT 254 (286)
Q Consensus 187 l~~~i~---~~~tk~v~i~~~n--~g~~~~----l~~I~~ia~~~~~~vivD~a~~~g~~~~~~-~~-~~~~-~~D~v~~ 254 (286)
|++++. ..++++|++++.+ .|...+ +++|.++|++||+++|+|++|+ |....+. .. ..+. ..|++
T Consensus 190 le~~l~~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DE~~~-g~g~~g~~~~~~~~~~~~di~-- 266 (439)
T 3dxv_A 190 LTEKLAAVPAGSIGAAFIEPIQSDGGLIVPPDGFLRKFADICRAHGILVVCDEVKV-GLARSGRLHCFEHEGFVPDIL-- 266 (439)
T ss_dssp HHHHHHTSCTTCEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTT-CTTTTSSSSGGGGTTCCCSEE--
T ss_pred HHHHHHhcCCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcCchhhHHHhcCCCCCEE--
Confidence 999994 3367788887443 456666 9999999999999999999986 3211111 10 0011 25666
Q ss_pred CCCCCCCC-CCceEEEEecchhhhhccC
Q 023191 255 TTHKSLRG-PRGAMIFFRKGVKEINKQG 281 (286)
Q Consensus 255 s~~K~l~g-p~gG~l~~~~~~~~~~~~~ 281 (286)
|++|+|++ .+.|++++++++.+..++.
T Consensus 267 s~sK~~~~G~riG~~~~~~~~~~~~~~~ 294 (439)
T 3dxv_A 267 VLGKGLGGGLPLSAVIAPAEILDCASAF 294 (439)
T ss_dssp EECGGGGTTSCCEEEEEEHHHHTSCSSS
T ss_pred EEcchhcCCcceEEEEECHHHHhhhcCC
Confidence 66798864 3459999999887766643
No 209
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=99.58 E-value=1.1e-14 Score=132.95 Aligned_cols=208 Identities=14% Similarity=0.062 Sum_probs=119.8
Q ss_pred CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-HHHHHHHHhc---
Q 023191 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALL--- 133 (286)
Q Consensus 58 ~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l~a~~--- 133 (286)
.+|.+++++.+.+.... .+.. ..+..+...+++++++++++.+.+ +|++++|++ ++..+++++.
T Consensus 46 ~~p~v~~a~~~~~~~~~--~~~~------~~~~~~~~~~l~~~la~~~~~~~~----~v~~~~gg~ea~~~al~~~~~~~ 113 (430)
T 3i4j_A 46 GRAEVGERMAAQAARLP--FVHG------SQFSSDVLEEYAGRLARFVGLPTF----RFWAVSGGSEATESAVKLARQYH 113 (430)
T ss_dssp CCHHHHHHHHHHHHHCC--CCCT------TTCEEHHHHHHHHHHHHHTTCTTC----EEEEESSHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcc--cccc------cccCCHHHHHHHHHHHHhCCCCCC----EEEEeCcHHHHHHHHHHHHHHHH
Confidence 38999999988775421 1111 112234556677889999987664 599999988 8887887775
Q ss_pred -----CCCCeEEeccCCCCcccCccccccccc-----ccccee--eeEEEecccCCCCCCCCHHHHHHHhhh---cCCcE
Q 023191 134 -----KPHDRIMALDLPHGGHLSHGYQTDTKK-----ISAVSI--FFETMPYRLNESTGYIDYDQLEKSATL---FRPKL 198 (286)
Q Consensus 134 -----~~Gd~Vl~~~~~~~~~~~~~~~~~~~~-----~~~~g~--~~~~v~~~~~~~~~~~d~e~l~~~i~~---~~tk~ 198 (286)
.++|.|++.++.|.++........... ..-... .+..++.+.....+..|+++|++++++ .++++
T Consensus 114 ~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~~ 193 (430)
T 3i4j_A 114 VERGEPGRFKVITRVPSYHGASLGSLAASGMGARRELYTPLMRPEAWPKLPKPDPARNGAEDAEGLRALLEREGPETVAA 193 (430)
T ss_dssp HHTTCTTCCEEEEETTC-------------------------CGGGSCEECCCCTTSCHHHHHTHHHHHHHHHCGGGEEE
T ss_pred HhcCCCCCcEEEEEeCCcCCCCcccccccCccccccccCCcCCCCCceEcCCCcccchhhHHHHHHHHHHHhcCCCCEEE
Confidence 558899999977766532111100000 000000 111122110000022467889998873 35667
Q ss_pred EEEcCCCC---CCccC----HHHHHHHHHhcCCEEEEecccc-ccccccCC--CCC-CCCcceEEEeCCCCCCCC--CCc
Q 023191 199 IVAGASAY---ARLYD----YERIRKVCNKQKAIMLADMAHI-SGLVAAGV--IPS-PFEYADVVTTTTHKSLRG--PRG 265 (286)
Q Consensus 199 v~i~~~n~---g~~~~----l~~I~~ia~~~~~~vivD~a~~-~g~~~~~~--~~~-~~~~~D~v~~s~~K~l~g--p~g 265 (286)
|+++|+|. |...+ +++|.++|++||+++|+|++|. ++...... ... . ...|+++ ++|+|++ .+.
T Consensus 194 vi~~p~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~~~~g~~~~~~~~~~-~~~di~t--~sK~l~~G~~r~ 270 (430)
T 3i4j_A 194 FMAEPVVGASDAALAPAPGYYERVRDICDEAGIIFIADEVMSGMGRCGSPLALSRWSG-VTPDIAV--LGKGLAAGYAPL 270 (430)
T ss_dssp EEECSSCCGGGTTCCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTT-CCCSEEE--ECGGGTTTSSCC
T ss_pred EEEcCcccCcCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccchhhhhhhcC-CCCcEEE--EcccccCCcccc
Confidence 77765442 33344 8999999999999999999976 32211000 001 1 0256665 4599865 344
Q ss_pred eEEEEecchhhhhcc
Q 023191 266 AMIFFRKGVKEINKQ 280 (286)
Q Consensus 266 G~l~~~~~~~~~~~~ 280 (286)
|++++++++.+..++
T Consensus 271 G~~~~~~~i~~~~~~ 285 (430)
T 3i4j_A 271 AGLLAAPQVYETVMG 285 (430)
T ss_dssp EEEEECHHHHHHHHH
T ss_pred EEEEECHHHHHHHhc
Confidence 999999888776654
No 210
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=99.56 E-value=7e-15 Score=134.05 Aligned_cols=196 Identities=12% Similarity=0.161 Sum_probs=122.3
Q ss_pred CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-HHHHHHHHhcC--
Q 023191 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLK-- 134 (286)
Q Consensus 58 ~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l~a~~~-- 134 (286)
.++.+++++.+.+.... +... .| ..++.+++++++++++|.+ +|++++|++ ++.+++.++..
T Consensus 74 ~~p~v~~ai~~~~~~~~---~~~~-~~-----~~~~~~~l~~~la~~~g~~------~v~~~~ggteA~~~al~~~~~~~ 138 (420)
T 2pb2_A 74 CHPALVEALKSQGETLW---HTSN-VF-----TNEPALRLGRKLIDATFAE------RVLFMNSGTEANETAFKLARHYA 138 (420)
T ss_dssp TCHHHHHHHHHHHTTCC---CCCT-TS-----CCHHHHHHHHHHHHHSSCS------EEEEESSHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcc---cccC-cc-----CCHHHHHHHHHHHhhCCCC------eEEEeCCHHHHHHHHHHHHHHHh
Confidence 58999999998876521 1111 11 1244555678888888743 488888888 88878887764
Q ss_pred -----CC-CeEEeccCCCCcccCccccccccc-----cccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEcC
Q 023191 135 -----PH-DRIMALDLPHGGHLSHGYQTDTKK-----ISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGA 203 (286)
Q Consensus 135 -----~G-d~Vl~~~~~~~~~~~~~~~~~~~~-----~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~~ 203 (286)
+| ++|+++++.|.+............ ..-....+..++ . .|+++|++++++ ++++|++++
T Consensus 139 ~~~~~~g~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~--~------~d~~~le~~i~~-~~~~vi~~p 209 (420)
T 2pb2_A 139 CVRHSPFKTKIIAFHNAFHGRSLFTVSVGGQPKYSDGFGPKPADIIHVP--F------NDLHAVKAVMDD-HTCAVVVEP 209 (420)
T ss_dssp HHHTCTTCCEEEEETTCCCCSSHHHHHHSSCHHHHTTSSSCCSCEEEEC--T------TCHHHHHHHCCT-TEEEEEECS
T ss_pred hhccCCCCCEEEEEeCCcCCcCHHHHHhcCCccccccCCCCCCCeEEec--C------CCHHHHHHHhcc-CceEEEEeC
Confidence 77 589999977765432111000000 000000022222 1 389999999987 899999974
Q ss_pred CC-CC-C----ccCHHHHHHHHHhcCCEEEEeccccccccccCCCC--CCCC-cceEEEeCCCCCCCCC-CceEEEEecc
Q 023191 204 SA-YA-R----LYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIP--SPFE-YADVVTTTTHKSLRGP-RGAMIFFRKG 273 (286)
Q Consensus 204 ~n-~g-~----~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~--~~~~-~~D~v~~s~~K~l~gp-~gG~l~~~~~ 273 (286)
.+ .+ . ..++++|.++|++||+++|+|++|. |....+... ..+. ..|+++ ++|+|+++ +.|+++++++
T Consensus 210 ~~~~gG~~~~~~~~l~~l~~l~~~~gi~lI~Dev~~-g~~~~g~~~~~~~~~~~~diit--~sK~l~~G~~iG~~~~~~~ 286 (420)
T 2pb2_A 210 IQGEGGVQAATPEFLKGLRDLCDEHQALLVFDEVQC-GMGRTGDLFAYMHYGVTPDILT--SAKALGGGFPVSAMLTTQE 286 (420)
T ss_dssp EETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTT-TTTTTSSSSHHHHHTCCCSEEE--ECGGGGTTSCCEEEEECHH
T ss_pred CcCCCCeecCCHHHHHHHHHHHHHcCCEEEEEcCCc-CcccCCcHHHHHhcCCCCCeEE--ecccccCCCceEEEEEhHH
Confidence 44 33 2 3568999999999999999999984 432212100 0011 268774 57999754 3499999888
Q ss_pred hhhhhcc
Q 023191 274 VKEINKQ 280 (286)
Q Consensus 274 ~~~~~~~ 280 (286)
+.+..++
T Consensus 287 l~~~l~~ 293 (420)
T 2pb2_A 287 IASAFHV 293 (420)
T ss_dssp HHTTCC-
T ss_pred HHHhhcC
Confidence 7666554
No 211
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=99.56 E-value=2.6e-14 Score=131.24 Aligned_cols=207 Identities=13% Similarity=0.096 Sum_probs=127.8
Q ss_pred CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-HHHHHHHHhcC--
Q 023191 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLK-- 134 (286)
Q Consensus 58 ~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l~a~~~-- 134 (286)
.++++++++.+.+.+.. + ..+.. +..++..++++.++++++.+.+ +|++++|++ ++.++++++..
T Consensus 67 ~~~~v~~a~~~~~~~~~---~--~~~~~---~~~~~~~~l~~~la~~~~~~~~----~v~~~~ggsea~~~al~~~~~~~ 134 (449)
T 3a8u_X 67 TRKEIQEAVAKQLSTLD---Y--SPGFQ---YGHPLSFQLAEKITDLTPGNLN----HVFFTDSGSECALTAVKMVRAYW 134 (449)
T ss_dssp SCHHHHHHHHHHTTTCS---C--CCSSS---CCCHHHHHHHHHHHTTSSTTEE----EEEEESSHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhCC---C--ccccc---cCCHHHHHHHHHHHHhCCCCCC----EEEEcCcHHHHHHHHHHHHHHHH
Confidence 48999999998876521 1 11101 1123444566888888876653 599999888 88878777653
Q ss_pred ------CCCeEEeccCCCCcccCcccccc-----ccc--cccceeeeEEEecccCC-CCC-CCC--------HHHHHHHh
Q 023191 135 ------PHDRIMALDLPHGGHLSHGYQTD-----TKK--ISAVSIFFETMPYRLNE-STG-YID--------YDQLEKSA 191 (286)
Q Consensus 135 ------~Gd~Vl~~~~~~~~~~~~~~~~~-----~~~--~~~~g~~~~~v~~~~~~-~~~-~~d--------~e~l~~~i 191 (286)
+||+|+++++.|.+......... +.. ....+ +..++++... ..+ .+| +++|++++
T Consensus 135 ~~~g~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~d~~~~~~~~~~~le~~l 212 (449)
T 3a8u_X 135 RLKGQATKTKMIGRARGYHGVNIAGTSLGGVNGNRKLFGQPMQD--VDHLPHTLLASNAYSRGMPKEGGIALADELLKLI 212 (449)
T ss_dssp HHTTCTTCCEEEEETTCCCCSSHHHHHHCCCHHHHTTTCCCSCS--EEEECCCCCGGGTTCSSSCSSSHHHHHHHHHHHH
T ss_pred HhcCCCCCCEEEEECCCcCCCChhhhhccCChhhccccCCCCCC--CeEecCCccccCccccCChHHHHHHHHHHHHHHH
Confidence 78999999977766532111000 000 00112 2334432210 111 246 99999998
Q ss_pred hh---cCCcEEEEcCCC--CCCccC----HHHHHHHHHhcCCEEEEecccc-ccccccCCCC-CCCC-cceEEEeCCCCC
Q 023191 192 TL---FRPKLIVAGASA--YARLYD----YERIRKVCNKQKAIMLADMAHI-SGLVAAGVIP-SPFE-YADVVTTTTHKS 259 (286)
Q Consensus 192 ~~---~~tk~v~i~~~n--~g~~~~----l~~I~~ia~~~~~~vivD~a~~-~g~~~~~~~~-~~~~-~~D~v~~s~~K~ 259 (286)
++ .++++|+++|.+ +|...+ +++|.++|++||+++|+|++|. +|.... ... ..+. ..|++ +++|+
T Consensus 213 ~~~~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~-~~~~~~~~~~~di~--s~sK~ 289 (449)
T 3a8u_X 213 ELHDASNIAAVFVEPLAGSAGVLVPPEGYLKRNREICNQHNILLVFDEVITGFGRTGS-MFGADSFGVTPDLM--CIAKQ 289 (449)
T ss_dssp HHHCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSS-SSHHHHHTCCCSEE--EECGG
T ss_pred HhcCCCCEEEEEEcCccCCCCCccCCHHHHHHHHHHHHHhCCEEEEeccccCccccCc-chhhhhcCCCCCEE--EEccc
Confidence 74 266777776543 566677 9999999999999999999984 543211 000 0001 25776 55699
Q ss_pred CCC--CCceEEEEecchhhhhccC
Q 023191 260 LRG--PRGAMIFFRKGVKEINKQG 281 (286)
Q Consensus 260 l~g--p~gG~l~~~~~~~~~~~~~ 281 (286)
|++ .+.|++++++++.+..+++
T Consensus 290 l~~G~~~~G~~~~~~~~~~~l~~~ 313 (449)
T 3a8u_X 290 VTNGAIPMGAVIASTEIYQTFMNQ 313 (449)
T ss_dssp GGTTSSCCEEEEEEHHHHHHHHTC
T ss_pred ccCCCCceEEEEECHHHHHHhhcc
Confidence 976 3568888998877766543
No 212
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=99.56 E-value=1.9e-13 Score=125.54 Aligned_cols=206 Identities=10% Similarity=0.028 Sum_probs=124.8
Q ss_pred CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-HHHHHHHHhc---
Q 023191 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALL--- 133 (286)
Q Consensus 58 ~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l~a~~--- 133 (286)
.+|++++++.+.+.... +.. ..+..+...+++++++++++.+. +|++++|++ ++..+++.+.
T Consensus 66 ~~p~v~~A~~~~~~~~~---~~~------~~~~~~~~~~la~~l~~~~~~~~-----~v~~~~ggseA~~~al~~~~~~~ 131 (452)
T 3n5m_A 66 GRKELAEAAYKQLQTLS---YFP------MSQSHEPAIKLAEKLNEWLGGEY-----VIFFSNSGSEANETAFKIARQYY 131 (452)
T ss_dssp CCHHHHHHHHHHHTTCC---CCC------TTSEEHHHHHHHHHHHHHHTSCE-----EEEEESSHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcC---Ccc------cccCCHHHHHHHHHHHHhCCCCc-----eEEEeCchHHHHHHHHHHHHHHH
Confidence 47999999998886521 100 01223455567788888887654 388888888 8888888776
Q ss_pred --C---CCCeEEeccCCCCcccCcccc-----ccccccccceeeeEEEecccCCCCCC-CC---------HHHHHHHhh-
Q 023191 134 --K---PHDRIMALDLPHGGHLSHGYQ-----TDTKKISAVSIFFETMPYRLNESTGY-ID---------YDQLEKSAT- 192 (286)
Q Consensus 134 --~---~Gd~Vl~~~~~~~~~~~~~~~-----~~~~~~~~~g~~~~~v~~~~~~~~~~-~d---------~e~l~~~i~- 192 (286)
. ++|+|+++++.|.+...-... .+.....-.......++.+.. -... -| +++|+++++
T Consensus 132 ~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~le~~l~~ 210 (452)
T 3n5m_A 132 AQKGEPHRYKFMSRYRGYHGNTMATMAATGQAQRRYQYEPFASGFLHVTPPDC-YRMPGIERENIYDVECVKEVDRVMTW 210 (452)
T ss_dssp HTTTCTTCCEEEEETTCCCCSSHHHHHSCCCGGGTTTTCCCCSCEEEECCCCT-TTSTTTTTSCGGGCHHHHHHHHHHHH
T ss_pred HhcCCCCCCEEEEECCCcCCCCHHHHhcCCchhhccccCCCCCCCeEeCCCcc-ccCccCCchhhHHHHHHHHHHHHHHh
Confidence 5 889999999887765311100 000000000001222322110 0000 12 899999987
Q ss_pred --hcCCcEEEEcC--CCCCCccC----HHHHHHHHHhcCCEEEEecccc-ccccccCCCCCCCC-cceEEEeCCCCCCCC
Q 023191 193 --LFRPKLIVAGA--SAYARLYD----YERIRKVCNKQKAIMLADMAHI-SGLVAAGVIPSPFE-YADVVTTTTHKSLRG 262 (286)
Q Consensus 193 --~~~tk~v~i~~--~n~g~~~~----l~~I~~ia~~~~~~vivD~a~~-~g~~~~~~~~~~~~-~~D~v~~s~~K~l~g 262 (286)
..++++|++++ +|+|...+ +++|.++|++||+++|+|++|. +|..........+. ..|+++ ++|++++
T Consensus 211 ~~~~~~~~vi~ep~~~n~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~~~~~~~~~~~~di~t--~sK~l~~ 288 (452)
T 3n5m_A 211 ELSETIAAFIMEPIITGGGILMAPQDYMKAVHETCQKHGALLISDEVICGFGRTGKAFGFMNYDVKPDIIT--MAKGITS 288 (452)
T ss_dssp HCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTCCCSEEE--ECGGGGT
T ss_pred cCCCCEEEEEEccccCCCCeeeCCHHHHHHHHHHHHHcCCEEEEecchhCCCcccccchhhhcCCCCCEEe--ecccccC
Confidence 23678888874 46555555 9999999999999999999976 32221100000011 256765 4598855
Q ss_pred C--CceEEEEecchhhhhcc
Q 023191 263 P--RGAMIFFRKGVKEINKQ 280 (286)
Q Consensus 263 p--~gG~l~~~~~~~~~~~~ 280 (286)
. +.|++++++++.+..++
T Consensus 289 G~~~ig~~~~~~~i~~~~~~ 308 (452)
T 3n5m_A 289 AYLPLSATAVKREIYEAFKG 308 (452)
T ss_dssp TSSCCEEEEEEHHHHGGGCS
T ss_pred CCcceEEEEECHHHHHHHhh
Confidence 3 33999999998877753
No 213
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=99.55 E-value=1.8e-14 Score=132.90 Aligned_cols=207 Identities=13% Similarity=-0.001 Sum_probs=125.9
Q ss_pred CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-HHHHHHHHhcC--
Q 023191 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLK-- 134 (286)
Q Consensus 58 ~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l~a~~~-- 134 (286)
.+|++++++.+.+.+.. ..+.. ..+..+...+++++++++++.+.+ .|++++|++ ++..++.++..
T Consensus 67 ~~p~v~~A~~~~~~~~~-~~~~~------~~~~~~~~~~la~~l~~~~~~~~~----~v~~~~ggseA~~~al~~~~~~~ 135 (459)
T 4a6r_A 67 GRKDFAEAARRQMEELP-FYNTF------FKTTHPAVVELSSLLAEVTPAGFD----RVFYTNSGSESVDTMIRMVRRYW 135 (459)
T ss_dssp CCHHHHHHHHHHHHHCS-CCCTT------SSSCCHHHHHHHHHHHHHSCTTCC----EEEEESSHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcc-ccccc------cccCCHHHHHHHHHHHHhCCCCCC----EEEEeCchHHHHHHHHHHHHHHH
Confidence 47999999988876521 11111 112234555677899999887664 599999888 88888888764
Q ss_pred ------CCCeEEeccCCCCcccCcc-----ccccccccccceeeeEEEeccc--CCCCCCCC--------HHHHHHHhhh
Q 023191 135 ------PHDRIMALDLPHGGHLSHG-----YQTDTKKISAVSIFFETMPYRL--NESTGYID--------YDQLEKSATL 193 (286)
Q Consensus 135 ------~Gd~Vl~~~~~~~~~~~~~-----~~~~~~~~~~~g~~~~~v~~~~--~~~~~~~d--------~e~l~~~i~~ 193 (286)
++++|+++++.|.++..-. ...++.........+..++++. ..+++ .| +++|++++.+
T Consensus 136 ~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~d~~~~~~~~~~~le~~i~~ 214 (459)
T 4a6r_A 136 DVQGKPEKKTLIGRWNGYHGSTIGGASLGGMKYMHEQGDLPIPGMAHIEQPWWYKHGKD-MTPDEFGVVAARWLEEKILE 214 (459)
T ss_dssp HHTTCTTCCEEEEETTCCCCSSHHHHHHSCCTTTC---CCSCSSEEEECCCCHHHHCTT-CCHHHHHHHHHHHHHHHHHH
T ss_pred HhcCCCCCCEEEEECCCcCCccHHHHhhcCChhhccccCCCCCCCEEeCCCccccCCcc-cCHHHHHHHHHHHHHHHHHH
Confidence 6799999998877653110 0011100001111123343222 10112 45 7889988863
Q ss_pred ---cCCcEEEEcCCC--CCCccC----HHHHHHHHHhcCCEEEEecccc-ccccccCCCCC-CCC-cceEEEeCCCCCCC
Q 023191 194 ---FRPKLIVAGASA--YARLYD----YERIRKVCNKQKAIMLADMAHI-SGLVAAGVIPS-PFE-YADVVTTTTHKSLR 261 (286)
Q Consensus 194 ---~~tk~v~i~~~n--~g~~~~----l~~I~~ia~~~~~~vivD~a~~-~g~~~~~~~~~-~~~-~~D~v~~s~~K~l~ 261 (286)
.++++|+++|.+ .|...+ +++|.++|++||+++|+|++|. +|... ..... .+. ..|++++ +|+++
T Consensus 215 ~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~G-~~~~~~~~~~~pdi~t~--sK~l~ 291 (459)
T 4a6r_A 215 IGADKVAAFVGEPIQGAGGVIVPPATYWPEIERICRKYDVLLVADEVICGFGRTG-EWFGHQHFGFQPDLFTA--AKGLS 291 (459)
T ss_dssp HCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTS-SSSHHHHHTCCCSEEEE--CGGGG
T ss_pred cCCCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccc-ccchHhhcCCCCCeeeh--hhhhc
Confidence 256777776544 334444 9999999999999999999976 22111 11100 001 2577765 59987
Q ss_pred C--CCceEEEEecchhhhhc
Q 023191 262 G--PRGAMIFFRKGVKEINK 279 (286)
Q Consensus 262 g--p~gG~l~~~~~~~~~~~ 279 (286)
| .+.|++++++++.+...
T Consensus 292 gg~~~lg~v~~~~~i~~~~~ 311 (459)
T 4a6r_A 292 SGYLPIGAVFVGKRVAEGLI 311 (459)
T ss_dssp TTSSCCEEEEECHHHHHHHH
T ss_pred CCCCCccceeeCHHHHHHhh
Confidence 6 45599999998877654
No 214
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=99.55 E-value=6.7e-14 Score=129.03 Aligned_cols=208 Identities=12% Similarity=-0.008 Sum_probs=126.4
Q ss_pred CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-HHHHHHHHhc---
Q 023191 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALL--- 133 (286)
Q Consensus 58 ~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l~a~~--- 133 (286)
.+|.+++++.+.+.+.. ..+.. ..+..+++.+++++++++++.+.+ +|++++|++ ++.++++++.
T Consensus 68 ~~p~v~~A~~~~~~~~~-~~~~~------~~~~~~~~~~la~~l~~~~~~~~~----~v~~~~gGseA~~~al~~~~~~~ 136 (460)
T 3gju_A 68 GRQKIADAIATQAKNLA-YYHAY------VGHGTEASITLAKMIIDRAPKGMS----RVYFGLSGSDANETNIKLIWYYN 136 (460)
T ss_dssp CCHHHHHHHHHHHHHHS-CCCCC------TTCCCHHHHHHHHHHHHHSCTTEE----EEEEESSHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcc-ccccc------cccCCHHHHHHHHHHHhhCCCCcC----EEEEeCchHHHHHHHHHHHHHHH
Confidence 47999999988775421 11111 112224555677888888876653 599999888 8888888776
Q ss_pred -----CCCCeEEeccCCCCcccCcc-----ccccccccccceeeeEEEeccc--CCCCCCCC--------HHHHHHHhhh
Q 023191 134 -----KPHDRIMALDLPHGGHLSHG-----YQTDTKKISAVSIFFETMPYRL--NESTGYID--------YDQLEKSATL 193 (286)
Q Consensus 134 -----~~Gd~Vl~~~~~~~~~~~~~-----~~~~~~~~~~~g~~~~~v~~~~--~~~~~~~d--------~e~l~~~i~~ 193 (286)
.+++.|+++++.|.+..... ...++.........+..++++. ..++...+ +++|++++.+
T Consensus 137 ~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~le~~i~~ 216 (460)
T 3gju_A 137 NVLGRPEKKKIISRWRGYHGSGVMTGSLTGLDLFHNAFDLPRAPVLHTEAPYYFRRTDRSMSEEQFSQHCADKLEEMILA 216 (460)
T ss_dssp HHTTCTTCCEEEEETTCCCCSSHHHHHHCCCGGGTTTTTCSCTTEEEECCCCGGGCSCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HhcCCCCCCEEEEECCCcCCCCHHHhhccCCcccccccCCCCCCCEEeCCCccccCCccccChhHHHHHHHHHHHHHHHh
Confidence 35799999998886654111 1111111111111233344322 11112233 6889988863
Q ss_pred ---cCCcEEEEcCCC--CCCccC----HHHHHHHHHhcCCEEEEecccc-ccccccCCCCCC-CC-cceEEEeCCCCCCC
Q 023191 194 ---FRPKLIVAGASA--YARLYD----YERIRKVCNKQKAIMLADMAHI-SGLVAAGVIPSP-FE-YADVVTTTTHKSLR 261 (286)
Q Consensus 194 ---~~tk~v~i~~~n--~g~~~~----l~~I~~ia~~~~~~vivD~a~~-~g~~~~~~~~~~-~~-~~D~v~~s~~K~l~ 261 (286)
.++++|+++|.| .|...+ +++|.++|++||+++|+|++|. +|-.. ...... +. ..|++++ +|+++
T Consensus 217 ~~~~~~aaii~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g-~~~~~~~~~~~pdi~t~--sK~l~ 293 (460)
T 3gju_A 217 EGPETIAAFIGEPILGTGGIVPPPAGYWEKIQAVLKKYDVLLVADEVVTGFGRLG-TMFGSDHYGIKPDLITI--AKGLT 293 (460)
T ss_dssp HCGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTS-SSCHHHHHTCCCSEEEE--CGGGT
T ss_pred cCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccc-ccchHhhcCCCCCeeee--ehhhc
Confidence 367788887544 334343 9999999999999999999976 32211 110000 00 2567654 59997
Q ss_pred C--CCceEEEEecchhhhhc
Q 023191 262 G--PRGAMIFFRKGVKEINK 279 (286)
Q Consensus 262 g--p~gG~l~~~~~~~~~~~ 279 (286)
| .+.|++++++++.+..+
T Consensus 294 gG~~~lg~v~~~~~i~~~~~ 313 (460)
T 3gju_A 294 SAYAPLSGVIVADRVWQVLV 313 (460)
T ss_dssp TTSSCCEEEEEEHHHHHHHH
T ss_pred CCCCCeEEEEECHHHHHHHh
Confidence 7 45699999998877764
No 215
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.55 E-value=1e-13 Score=126.62 Aligned_cols=195 Identities=13% Similarity=0.064 Sum_probs=118.0
Q ss_pred CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-HHHHHHHHhcC--
Q 023191 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLK-- 134 (286)
Q Consensus 58 ~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l~a~~~-- 134 (286)
.+|.+++++.+.+......+++ . ....+++++++++++ +.+ .|++++|++ ++.+++..+..
T Consensus 72 ~~p~v~~a~~~~~~~~~~~~~~-------~----~~~~~l~~~la~~~~-~~~----~v~~~~sGsea~~~ai~~a~~~~ 135 (434)
T 3l44_A 72 AHPHITKAITTAAENGVLYGTP-------T----ALEVKFAKMLKEAMP-ALD----KVRFVNSGTEAVMTTIRVARAYT 135 (434)
T ss_dssp TCHHHHHHHHHHHHHCSCCSSC-------C----HHHHHHHHHHHHHCT-TCS----EEEEESSHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhCcCCCCC-------C----HHHHHHHHHHHHhCC-CCC----EEEEeCchHHHHHHHHHHHHHhh
Confidence 4899999998877652211121 1 233345577888886 443 588888888 88877776644
Q ss_pred CCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCC------------CCCHHHHHHHhhh--cCCcEEE
Q 023191 135 PHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTG------------YIDYDQLEKSATL--FRPKLIV 200 (286)
Q Consensus 135 ~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~------------~~d~e~l~~~i~~--~~tk~v~ 200 (286)
++++|+++++.|.++...... ..|........+.. ... .-|+++|++++++ .++++|+
T Consensus 136 ~~~~vi~~~~~yhg~~~~~~~-------~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi 207 (434)
T 3l44_A 136 GRTKIMKFAGCYHGHSDLVLV-------AAGSGPSTLGTPDS-AGVPQSIAQEVITVPFNNVETLKEALDKWGHEVAAIL 207 (434)
T ss_dssp CCCEEEEETTCCCCSSGGGGB-------C-------CCCBSS-TTCCHHHHTTEEEECTTCHHHHHHHHHHHGGGEEEEE
T ss_pred CCCEEEEEcCccCCCcHHHHh-------hcCCcccccCCCCc-CCCCCcCCCceEecCcccHHHHHHHHHhCCCCEEEEE
Confidence 789999999777655321110 11100000000000 000 0189999999874 2567777
Q ss_pred EcCCC--CCCccC----HHHHHHHHHhcCCEEEEeccccccccccCCCC-C-CCC-cceEEEeCCCCCCCCC-CceEEEE
Q 023191 201 AGASA--YARLYD----YERIRKVCNKQKAIMLADMAHISGLVAAGVIP-S-PFE-YADVVTTTTHKSLRGP-RGAMIFF 270 (286)
Q Consensus 201 i~~~n--~g~~~~----l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~-~-~~~-~~D~v~~s~~K~l~gp-~gG~l~~ 270 (286)
++|.| .|...+ +++|.++|++||+++|+|++|. |. ..+... . .+. ..|+++ ++|.|+++ +.|++++
T Consensus 208 ~ep~~~~~G~~~~~~~~l~~l~~l~~~~~illI~DEv~~-g~-~~g~~~~~~~~~~~~di~t--~sK~~~~G~~iG~~~~ 283 (434)
T 3l44_A 208 VEPIVGNFGIVEPKPGFLEKVNELVHEAGALVIYDEVIT-AF-RFMYGGAQDLLGVTPDLTA--LGKVIGGGLPIGAYGG 283 (434)
T ss_dssp ECSSBCTTSCBCCCTTHHHHHHHHHHTTTCEEEEECTTT-TT-TSSSSCHHHHHTCCCSEEE--EEGGGGTTSSCEEEEE
T ss_pred EcCCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-ce-eccccHHHHHcCCCCCeee--hhhhhcCCcCeeeEEE
Confidence 77555 345555 9999999999999999999975 32 111100 0 000 256654 45988654 3499999
Q ss_pred ecchhhhhcc
Q 023191 271 RKGVKEINKQ 280 (286)
Q Consensus 271 ~~~~~~~~~~ 280 (286)
++++.+..++
T Consensus 284 ~~~i~~~~~~ 293 (434)
T 3l44_A 284 KKEIMEQVAP 293 (434)
T ss_dssp CHHHHTTBTT
T ss_pred cHHHHHhhcc
Confidence 9988776654
No 216
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=99.53 E-value=7.3e-14 Score=127.46 Aligned_cols=206 Identities=12% Similarity=0.020 Sum_probs=125.0
Q ss_pred CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-HHHHHHHHhc--C
Q 023191 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALL--K 134 (286)
Q Consensus 58 ~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l~a~~--~ 134 (286)
.+|++++++.+.+.... +... .|. .+...++++.++++++.+.+ +|++++|++ ++..+++++. .
T Consensus 60 ~~p~v~~a~~~~~~~~~---~~~~-~~~-----~~~~~~l~~~la~~~~~~~~----~v~~~~gg~ea~~~a~~~~~~~~ 126 (433)
T 1zod_A 60 CHPEIVSVIGEYAGKLD---HLFS-EML-----SRPVVDLATRLANITPPGLD----RALLLSTGAESNEAAIRMAKLVT 126 (433)
T ss_dssp TCHHHHHHHHHHHHHCC---CCCT-TCC-----CHHHHHHHHHHHHHSCTTCC----EEEEESCHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhCc---cccc-ccC-----CHHHHHHHHHHHHhCCCCcC----EEEEeCchHHHHHHHHHHHHHhh
Confidence 48999999988876521 1111 111 13444566888889987654 599998888 8887776543 3
Q ss_pred CCCeEEeccCCCCcccCcccc----ccccc--cccceeeeEEEecccCC-CCC--------CCCHHHHHHHhhh---cCC
Q 023191 135 PHDRIMALDLPHGGHLSHGYQ----TDTKK--ISAVSIFFETMPYRLNE-STG--------YIDYDQLEKSATL---FRP 196 (286)
Q Consensus 135 ~Gd~Vl~~~~~~~~~~~~~~~----~~~~~--~~~~g~~~~~v~~~~~~-~~~--------~~d~e~l~~~i~~---~~t 196 (286)
.+|+|+++++.|.+....... .+... ....+ ++.++++... ..+ .+|+++|++.+++ .++
T Consensus 127 ~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~ 204 (433)
T 1zod_A 127 GKYEIVGFAQSWHGMTGAAASATYSAGRKGVGPAAVG--SFAIPAPFTYRPRFERNGAYDYLAELDYAFDLIDRQSSGNL 204 (433)
T ss_dssp TCCEEEEETTCCCCSSHHHHHTCCSSCCSSSCCCCTT--EEEECCCCTTSCCCEETTEECHHHHHHHHHHHHHHHCCSCE
T ss_pred CCCeEEEECCCcCCCChhHHhhcCCccccccCCCCCC--ceEecCCcccccccCCchhhhHHHHHHHHHHHHHhcCCCCe
Confidence 468999999777654311000 00000 11123 3334432110 011 2469999999874 366
Q ss_pred cEEEEcCCC--CCCccC----HHHHHHHHHhcCCEEEEecccc-ccccccCCCCCC-CC-cceEEEeCCCCCCCCC-Cce
Q 023191 197 KLIVAGASA--YARLYD----YERIRKVCNKQKAIMLADMAHI-SGLVAAGVIPSP-FE-YADVVTTTTHKSLRGP-RGA 266 (286)
Q Consensus 197 k~v~i~~~n--~g~~~~----l~~I~~ia~~~~~~vivD~a~~-~g~~~~~~~~~~-~~-~~D~v~~s~~K~l~gp-~gG 266 (286)
++|+++|.| +|...+ +++|.++|++||+++|+|++|+ +|... ...... +. ..|++ +++|+|+++ +.|
T Consensus 205 ~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~g~~g-~~~~~~~~~~~~di~--s~sK~~~~G~~ig 281 (433)
T 1zod_A 205 AAFIAEPILSSGGIIELPDGYMAALKRKCEARGMLLILDEAQTGVGRTG-TMFACQRDGVTPDIL--TLSKTLGAGLPLA 281 (433)
T ss_dssp EEEEECSEETTTTCEECCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTS-SSSTHHHHTCCCSEE--EECHHHHTTSSCE
T ss_pred EEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCc-hHhHHhhcCCCCCEE--EecccccCCCCee
Confidence 777776543 565555 9999999999999999999987 33221 111000 01 25665 556998653 339
Q ss_pred EEEEecchhhhhccC
Q 023191 267 MIFFRKGVKEINKQG 281 (286)
Q Consensus 267 ~l~~~~~~~~~~~~~ 281 (286)
++++++++.+..+++
T Consensus 282 ~~~~~~~~~~~~~~~ 296 (433)
T 1zod_A 282 AIVTSAAIEERAHEL 296 (433)
T ss_dssp EEEECHHHHHHHHHT
T ss_pred EEEEhHHHHHhhccC
Confidence 999998887666543
No 217
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=99.53 E-value=1.1e-13 Score=126.18 Aligned_cols=205 Identities=12% Similarity=0.096 Sum_probs=125.2
Q ss_pred cCceecCCCC-----CCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCC
Q 023191 47 KGLELIPSEN-----FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSG 121 (286)
Q Consensus 47 ~~i~L~~~e~-----~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG 121 (286)
+.+++..+.. ..+|.+++++.+.+.... .+ +. ..+.+.+++++++++++ +.+ +|++++|
T Consensus 53 ~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~--~~------~~---~~~~~~~la~~l~~~~~-~~~----~v~~~~g 116 (427)
T 3fq8_A 53 RYIDYVGTWGPAICGHAHPEVIEALKVAMEKGT--SF------GA---PCALENVLAEMVNDAVP-SIE----MVRFVNS 116 (427)
T ss_dssp EEEESSGGGTTCTTCBTCHHHHHHHHHHHTTCS--CC------SS---CCHHHHHHHHHHHHHST-TCS----EEEEESS
T ss_pred EEEECCCchhhhccCCCCHHHHHHHHHHHHhCC--Cc------CC---CCHHHHHHHHHHHHhCC-CCC----EEEEeCC
Confidence 3466655432 258999999998876521 11 11 12455567788888887 443 5889888
Q ss_pred hH-HHHHHHHHh--cCCCCeEEeccCCCCcccCcccccccccccc------ce------eeeEEEecccCCCCCCCCHHH
Q 023191 122 SP-SNFQVYTAL--LKPHDRIMALDLPHGGHLSHGYQTDTKKISA------VS------IFFETMPYRLNESTGYIDYDQ 186 (286)
Q Consensus 122 ~~-a~~~~l~a~--~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~------~g------~~~~~v~~~~~~~~~~~d~e~ 186 (286)
++ ++.+++... ...+++|+++++.|.+............... .+ ..+..++ . -|+++
T Consensus 117 gsea~~~al~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~------~d~~~ 188 (427)
T 3fq8_A 117 GTEACMAVLRIMRAYTGRDKIIKFEGCYHGHADMFLVKAGSGVATLGLPSSPGVPKKTTANTLTTP--Y------NDLEA 188 (427)
T ss_dssp HHHHHHHHHHHHHHHHCCCEEEEEETCCCCSCGGGCSSCCTHHHHHTCCSCSSSCHHHHTTEEEEE--T------TCHHH
T ss_pred HHHHHHHHHHHHHHhhCCCEEEEECCCcCCCCHHHHHhcCCcccccCCCCCCCCCCcccCceeecC--C------CCHHH
Confidence 88 887666332 2345789988877765432111000000000 00 0011111 1 18999
Q ss_pred HHHHhhhc--CCcEEEEcCCC--CCCccC----HHHHHHHHHhcCCEEEEeccccccccccCCC----CCCCCcceEEEe
Q 023191 187 LEKSATLF--RPKLIVAGASA--YARLYD----YERIRKVCNKQKAIMLADMAHISGLVAAGVI----PSPFEYADVVTT 254 (286)
Q Consensus 187 l~~~i~~~--~tk~v~i~~~n--~g~~~~----l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~----~~~~~~~D~v~~ 254 (286)
|+++++++ ++++|++++.| .|...+ +++|.++|++||+++|+|++|. |. ..+.. ... ...|++++
T Consensus 189 le~~l~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~-g~-~~g~~~~~~~~~-~~~di~t~ 265 (427)
T 3fq8_A 189 VKALFAENPGEIAGVILEPIVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVIT-GF-RIAYGGVQEKFG-VTPDLTTL 265 (427)
T ss_dssp HHHHHHHSTTTEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHTTCEEEEECTTT-BT-TTBTTHHHHHTT-CCCSEEEE
T ss_pred HHHHHHhCCCCEEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-cc-ccCcchhhHhcC-CCCChhhh
Confidence 99999763 56778777444 456666 9999999999999999999986 43 11110 011 02576655
Q ss_pred CCCCCCCC-CCceEEEEecchhhhhcc
Q 023191 255 TTHKSLRG-PRGAMIFFRKGVKEINKQ 280 (286)
Q Consensus 255 s~~K~l~g-p~gG~l~~~~~~~~~~~~ 280 (286)
| |+|++ .+.|++++++++.+..++
T Consensus 266 s--K~~~~G~~~G~~~~~~~~~~~~~~ 290 (427)
T 3fq8_A 266 G--KIIGGGLPVGAYGGKREIMQLVAP 290 (427)
T ss_dssp C--GGGGTTSSCEEEEECHHHHTTBTT
T ss_pred h--hhhhCCcceEEEEEcHHHHHhhcc
Confidence 4 99864 356999999888777664
No 218
>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*
Probab=99.52 E-value=2e-15 Score=138.11 Aligned_cols=199 Identities=10% Similarity=-0.101 Sum_probs=129.6
Q ss_pred cCceecCCCCC--CCHHHHHHhccccccCCCCCCCCCcccCCcc-h---HHHHHHHHHHHHHHHCCCCCCCcceeEEeCC
Q 023191 47 KGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNE-Y---IDMAESLCQKRALEAFRLDPEKWGVNVQSLS 120 (286)
Q Consensus 47 ~~i~L~~~e~~--~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~-~---~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~s 120 (286)
..++|..+++. +++.+++++.+.+....... ..|+... + ..+|++++++++.+..+...+. .+|++|+
T Consensus 57 ~~i~l~~g~~~~~~~~~v~~a~~~~l~~~~~~~----~~Y~~~~~G~~~~~~lr~aia~~~~~~~~~~~~~--~~iv~t~ 130 (427)
T 2hox_A 57 CSADVASGDGLFLEEYWKQHKEASAVLVSPWHR----MSYFFNPVSNFISFELEKTIKELHEVVGNAAAKD--RYIVFGV 130 (427)
T ss_dssp CCEECCSCCCGGGHHHHTTSHHHHCEEECTTTT----CSSSCSSCCTTCCHHHHHHHHHHHHHHTCBCCTT--CEEEEES
T ss_pred ceEEecCcCCCCCCCHHHHHhHHhhhhcCCccc----ccCCCCCCCccchHHHHHHHHHHHHHhCCcCCCC--CEEEEeC
Confidence 45888888884 34566777776663211111 0123333 4 6789999998888766542221 3699999
Q ss_pred ChH-HHHHHHHHh--------cCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHh
Q 023191 121 GSP-SNFQVYTAL--------LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSA 191 (286)
Q Consensus 121 G~~-a~~~~l~a~--------~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i 191 (286)
|++ ++.+++.++ ++|||+|++++|.|.+ +...+...|.+++. +.+|+++|++.+
T Consensus 131 G~~~al~~~~~~l~~~~~~~~~~~Gd~Vlv~~P~y~~--------~~~~~~~~g~~~~~---------~~~d~~~l~~~~ 193 (427)
T 2hox_A 131 GVTQLIHGLVISLSPNMTATPDAPESKVVAHAPFYPV--------FREQTKYFDKKGYV---------WAGNAANYVNVS 193 (427)
T ss_dssp HHHHHHHHHHHHHSCCTTTCTTSCCEEEEECSSCCHH--------HHHHHHHSCBTTEE---------EEEEGGGGTTCS
T ss_pred CHHHHHHHHHHHHhhccccccCCCCCEEEEeCCCccc--------HHHHHHHcCCeeee---------ecCCHHHHHHhh
Confidence 999 888899999 9999999999955543 33344455544321 345677888877
Q ss_pred hhcCCcEEEEc-CCC-CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCCcceEEEeCCCCCCC--CCCceE
Q 023191 192 TLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLR--GPRGAM 267 (286)
Q Consensus 192 ~~~~tk~v~i~-~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~--gp~gG~ 267 (286)
++ ++|+|+++ |+| +|...+ + +++ ++..+.|++++..... ..... ...+++++|++|+++ |.+.|+
T Consensus 194 ~~-~~k~v~l~~p~NPtG~~~~-~----~l~--~~~~i~d~~~~~~~~s--~~~~~-~~~~i~~~S~SK~~g~~G~RiG~ 262 (427)
T 2hox_A 194 NP-EQYIEMVTSPNNPEGLLRH-A----VIK--GCKSIYDMVYYWPHYT--PIKYK-ADEDILLFTMSKFTGHSGSRFGW 262 (427)
T ss_dssp CG-GGEEEEEESSCTTTCCCCC-C----SST--TCEEEEECTTCSTTTS--CCCSC-BCCSEEEEEHHHHTSCGGGCCEE
T ss_pred cC-CceEEEEcCCCCCcccccH-H----HHc--CCCEEEeecccCCCCC--ccccC-CCceEEEEeChhcCCCCCceEEE
Confidence 76 78999887 777 777777 3 233 5678999886421111 11111 237899999999874 344599
Q ss_pred EEEe-cchhhhhc
Q 023191 268 IFFR-KGVKEINK 279 (286)
Q Consensus 268 l~~~-~~~~~~~~ 279 (286)
++++ +++.+.++
T Consensus 263 ~~~~~~~l~~~l~ 275 (427)
T 2hox_A 263 ALIKDESVYNNLL 275 (427)
T ss_dssp EEECCHHHHHHHH
T ss_pred EEECCHHHHHHHH
Confidence 9995 66665554
No 219
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=99.51 E-value=1.7e-13 Score=125.81 Aligned_cols=205 Identities=8% Similarity=0.006 Sum_probs=117.9
Q ss_pred CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-HHHHHHHHhcC--
Q 023191 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLK-- 134 (286)
Q Consensus 58 ~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l~a~~~-- 134 (286)
.+|.+++++.+.+.... .+.. ..+..+.+.+++++++++++.+.+ .|++++|++ ++.+++.++..
T Consensus 61 ~~p~v~~A~~~~~~~~~--~~~~------~~~~~~~~~~la~~l~~~~~~~~~----~v~~~~sGseA~~~al~~~~~~~ 128 (448)
T 3dod_A 61 RKKELDDAIKKQLGKIA--HSTL------LGMTNVPATQLAETLIDISPKKLT----RVFYSDSGAEAMEIALKMAFQYW 128 (448)
T ss_dssp SCHHHHHHHHHHHTTCS--CCCC------SSSEEHHHHHHHHHHHHHSCTTEE----EEEEESSHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcc--Cccc------cccCCHHHHHHHHHHHHhCCCCCC----EEEEeCchHHHHHHHHHHHHHHH
Confidence 47999999998876521 1111 112224455677889998876553 588888888 88888877754
Q ss_pred --CC----CeEEeccCCCCcccCccccc-----cccccccceeeeEEEecccCCCCCCC-----------CHHHHHHHhh
Q 023191 135 --PH----DRIMALDLPHGGHLSHGYQT-----DTKKISAVSIFFETMPYRLNESTGYI-----------DYDQLEKSAT 192 (286)
Q Consensus 135 --~G----d~Vl~~~~~~~~~~~~~~~~-----~~~~~~~~g~~~~~v~~~~~~~~~~~-----------d~e~l~~~i~ 192 (286)
+| |+|+++++.|.+........ +..........+..++.+ ..+.. |+++|+++++
T Consensus 129 ~~~G~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~d~~~le~~l~ 205 (448)
T 3dod_A 129 KNIGKPEKQKFIAMKNGYHGDTIGAVSVGSIELFHHVYGPLMFESYKAPIP---YVYRSESGDPDECRDQCLRELAQLLE 205 (448)
T ss_dssp HHTTCTTCCEEEEEC-----------------------------CEEECCC---CCTTSSSCCHHHHHHHHHHHHHHHHH
T ss_pred HhhCCCCCCEEEEECCCCCCccHHHHHhcCCccccccccCCCCCceEeCCC---ccccCCccchhhhhHHHHHHHHHHHH
Confidence 44 99999997776543211110 000000000012223221 22222 4899999887
Q ss_pred --hcCCcEEEEcCC--C-CCCccC----HHHHHHHHHhcCCEEEEecccc-ccccccCCCCC-CCC-cceEEEeCCCCCC
Q 023191 193 --LFRPKLIVAGAS--A-YARLYD----YERIRKVCNKQKAIMLADMAHI-SGLVAAGVIPS-PFE-YADVVTTTTHKSL 260 (286)
Q Consensus 193 --~~~tk~v~i~~~--n-~g~~~~----l~~I~~ia~~~~~~vivD~a~~-~g~~~~~~~~~-~~~-~~D~v~~s~~K~l 260 (286)
..++++|+++|. | .|...+ +++|.++|++||+++|+|++|. +|... ..... .+. ..|++++ +|++
T Consensus 206 ~~~~~~a~vi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g-~~~a~~~~~~~~di~t~--sK~l 282 (448)
T 3dod_A 206 EHHEEIAALSIESMVQGASGMIVMPEGYLAGVRELCTTYDVLMIVDEVATGFGRTG-KMFACEHENVQPDLMAA--GKGI 282 (448)
T ss_dssp HHGGGEEEEEEESSEESTTTCEECCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTS-SSSGGGGGTCCCSEEEE--CGGG
T ss_pred hCCCCEEEEEEeCcccCCCCeecCCHHHHHHHHHHHHHhCCEEEEeccccCCCccc-chhhhhhcCCCCCEEEe--cccc
Confidence 225677777643 3 444444 9999999999999999999986 22111 11000 001 2566654 5998
Q ss_pred CCC--CceEEEEecchhhhhcc
Q 023191 261 RGP--RGAMIFFRKGVKEINKQ 280 (286)
Q Consensus 261 ~gp--~gG~l~~~~~~~~~~~~ 280 (286)
++. +.|++++++++.+..++
T Consensus 283 ~~G~~~ig~v~~~~~~~~~~~~ 304 (448)
T 3dod_A 283 TGGYLPIAVTFATEDIYKAFYD 304 (448)
T ss_dssp GTTSSCCEEEEEEHHHHHTTCS
T ss_pred cCCcCceEEEEECHHHHHHhhh
Confidence 654 44999999988877654
No 220
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}
Probab=99.51 E-value=2e-13 Score=125.52 Aligned_cols=207 Identities=12% Similarity=0.102 Sum_probs=124.7
Q ss_pred cCceecCCCC-----CCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCC
Q 023191 47 KGLELIPSEN-----FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSG 121 (286)
Q Consensus 47 ~~i~L~~~e~-----~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG 121 (286)
..+++..+.. ..++.+++++.+.+.... .+ + +..+++++++++++++++ +.+ +|++++|
T Consensus 58 ~~iD~~~~~~~~~lg~~~~~v~~a~~~~~~~~~--~~------~---~~~~~~~~la~~l~~~~~-~~~----~v~~~~g 121 (453)
T 2cy8_A 58 VYLDFFGGHGALVLGHGHPRVNAAIAEALSHGV--QY------A---ASHPLEVRWAERIVAAFP-SIR----KLRFTGS 121 (453)
T ss_dssp EEEESCTTTTSCTTCBTCHHHHHHHHHHHTTTC--SS------C---SSCHHHHHHHHHHHHHCT-TCS----EEEEESC
T ss_pred EEEECcccHhhcccCCCCHHHHHHHHHHHHhCC--CC------C---CCCHHHHHHHHHHHhhCC-CCC----EEEEeCC
Confidence 3467765532 368999999998876521 11 1 134677788899999886 443 5888888
Q ss_pred hH-HHHHHHHH---hcCCCCeEEeccCCCCcccCccccccccc---cccceeee----EEEecccCCCCCCCCHHHHHHH
Q 023191 122 SP-SNFQVYTA---LLKPHDRIMALDLPHGGHLSHGYQTDTKK---ISAVSIFF----ETMPYRLNESTGYIDYDQLEKS 190 (286)
Q Consensus 122 ~~-a~~~~l~a---~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~---~~~~g~~~----~~v~~~~~~~~~~~d~e~l~~~ 190 (286)
++ ++.+++++ +.++ +.|+++++.|.++........... ....|... ..++++. .|+++|+++
T Consensus 122 g~eA~~~al~~ar~~~~~-~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~------~d~~~le~~ 194 (453)
T 2cy8_A 122 GTETTLLALRVARAFTGR-RMILRFEGHYHGWHDFSASGYNSHFDGQPAPGVLPETTANTLLIRP------DDIEGMREV 194 (453)
T ss_dssp HHHHHHHHHHHHHHHHCC-CEEEEECC----------------------------CGGGEEEECT------TCHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhCC-CEEEEEcCCcCCCchhhHhhcCCccCCCcCCCCCccccCceeecCC------CCHHHHHHH
Confidence 88 88877776 5554 678888876665432111000000 00012100 0111111 389999999
Q ss_pred hhh--cCCcEEEEcCCC--CCCccC----HHHHHHHHHhcCCEEEEeccccccccccCCC-CC-CCC-cceEEEeCCCCC
Q 023191 191 ATL--FRPKLIVAGASA--YARLYD----YERIRKVCNKQKAIMLADMAHISGLVAAGVI-PS-PFE-YADVVTTTTHKS 259 (286)
Q Consensus 191 i~~--~~tk~v~i~~~n--~g~~~~----l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~-~~-~~~-~~D~v~~s~~K~ 259 (286)
+++ .++++|+++|.+ +|...+ +++|.++|++||+++|+|++|+ |. ..+.. .. .+. ..|++ +++|+
T Consensus 195 l~~~~~~~~~vi~ep~~~~tG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~-g~-~~g~~~~~~~~~~~~di~--s~sK~ 270 (453)
T 2cy8_A 195 FANHGSDIAAFIAEPVGSHFGVTPVSDSFLREGAELARQYGALFILDEVIS-GF-RVGNHGMQALLDVQPDLT--CLAKA 270 (453)
T ss_dssp HHHHGGGEEEEEECSSEHHHHTEECCHHHHHHHHHHHHHTTCEEEEECTTT-TT-TTCTTHHHHHHTCCCSEE--EEEGG
T ss_pred HHhcCCCEEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecCcc-cc-ccCchhhhHHhCCCCcEE--EEChh
Confidence 874 267788877543 566666 9999999999999999999986 54 21210 00 001 25766 56699
Q ss_pred CCC-CCceEEEEecchhhhhcc
Q 023191 260 LRG-PRGAMIFFRKGVKEINKQ 280 (286)
Q Consensus 260 l~g-p~gG~l~~~~~~~~~~~~ 280 (286)
|++ .+.|++++++++.+..++
T Consensus 271 l~~G~~~G~v~~~~~~~~~l~~ 292 (453)
T 2cy8_A 271 SAGGLPGGILGGREDVMGVLSR 292 (453)
T ss_dssp GGTTSSCEEEEECHHHHTTSSS
T ss_pred hhCCcceEEEechHHHHHHhcc
Confidence 975 466999999887776654
No 221
>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}
Probab=99.50 E-value=6e-13 Score=121.34 Aligned_cols=207 Identities=14% Similarity=0.131 Sum_probs=121.6
Q ss_pred cCceecCCCC-----CCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCC
Q 023191 47 KGLELIPSEN-----FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSG 121 (286)
Q Consensus 47 ~~i~L~~~e~-----~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG 121 (286)
+.+++..+-. ..+|++++++.+.+.+....+++ . +...+++++++++++ ..+ .|++++|
T Consensus 54 ~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~~~~~-------~----~~~~~la~~l~~~~~-~~~----~v~~~~s 117 (429)
T 4e77_A 54 AYIDYVGSWGPMILGHNHPAIRQAVIEAVERGLSFGAP-------T----EMEVKMAQLVTDLVP-TMD----MVRMVNS 117 (429)
T ss_dssp EEEESSGGGTTCTTCBTCHHHHHHHHHHHTTCSCCSSC-------C----HHHHHHHHHHHHHST-TCS----EEEEESS
T ss_pred EEEECCCchhccccCCCCHHHHHHHHHHHHhCcccCCC-------C----HHHHHHHHHHHhhCC-CCC----EEEEeCc
Confidence 3466654432 24899999999887653211111 1 334446688888886 443 5888888
Q ss_pred hH-HHHHHHHHh--cCCCCeEEeccCCCCcccCcccccc-----------cccc-ccceeeeEEEecccCCCCCCCCHHH
Q 023191 122 SP-SNFQVYTAL--LKPHDRIMALDLPHGGHLSHGYQTD-----------TKKI-SAVSIFFETMPYRLNESTGYIDYDQ 186 (286)
Q Consensus 122 ~~-a~~~~l~a~--~~~Gd~Vl~~~~~~~~~~~~~~~~~-----------~~~~-~~~g~~~~~v~~~~~~~~~~~d~e~ 186 (286)
++ ++..++... ..+++.|+++++.|.+......... ..++ .........+ + ..|+++
T Consensus 118 Gsea~~~al~~a~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~------~~d~~~ 189 (429)
T 4e77_A 118 GTEATMSAIRLARGYTGRDKIIKFEGCYHGHADCLLVKAGSGALTLGQPNSPGVPTDFAKHTLTC--T------YNDLAS 189 (429)
T ss_dssp HHHHHHHHHHHHHHHHCCCEEEEETTCCCC------------------CCCTTSCGGGGTTEEEE--C------TTCHHH
T ss_pred HHHHHHHHHHHHHHhhCCCEEEEEcCccCCCChhhhhhcCCcccccCCCCcCCCCCccCCceeec--C------CCCHHH
Confidence 88 887777644 2467788888877665532100000 0000 0000001111 1 128999
Q ss_pred HHHHhhhc--CCcEEEEcCCC--CCCccC----HHHHHHHHHhcCCEEEEeccccccccccCCCC-CCCC-cceEEEeCC
Q 023191 187 LEKSATLF--RPKLIVAGASA--YARLYD----YERIRKVCNKQKAIMLADMAHISGLVAAGVIP-SPFE-YADVVTTTT 256 (286)
Q Consensus 187 l~~~i~~~--~tk~v~i~~~n--~g~~~~----l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~-~~~~-~~D~v~~s~ 256 (286)
|+++++++ ++++|+++|.| .|...+ +++|.++|++||+++|+|++|. |........ ..+. ..|++ ++
T Consensus 190 le~~l~~~~~~~~~vi~ep~~~~~g~~~~~~~~l~~l~~l~~~~~~lli~DEv~~-g~r~g~~~~~~~~~~~pdi~--t~ 266 (429)
T 4e77_A 190 VRQAFEQYPQEVACIIVEPVAGNMNCIPPLPEFLPGLRALCDEFGALLIIDEVMT-GFRVALAGAQDYYHVIPDLT--CL 266 (429)
T ss_dssp HHHHHHHSTTTEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEEETTT-BTTTBTTCHHHHTTCCCSEE--EE
T ss_pred HHHHHHhcCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-CcccCcchHHHhcCCCCCee--ee
Confidence 99999752 55677766554 345555 9999999999999999999987 331111100 0001 25765 45
Q ss_pred CCCCCC-CCceEEEEecchhhhhcc
Q 023191 257 HKSLRG-PRGAMIFFRKGVKEINKQ 280 (286)
Q Consensus 257 ~K~l~g-p~gG~l~~~~~~~~~~~~ 280 (286)
+|+|++ .+.|++++++++.+..++
T Consensus 267 sK~~~~G~~~G~~~~~~~~~~~l~~ 291 (429)
T 4e77_A 267 GKIIGGGMPVGAFGGRREVMNALAP 291 (429)
T ss_dssp EGGGGTTSCCEEEEECHHHHTTBTT
T ss_pred cccccCCCCeEEEEECHHHHHHhcc
Confidence 598864 355999999888777664
No 222
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=99.50 E-value=3.4e-13 Score=124.93 Aligned_cols=208 Identities=10% Similarity=-0.001 Sum_probs=125.3
Q ss_pred CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-HHHHHHHHhc---
Q 023191 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALL--- 133 (286)
Q Consensus 58 ~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l~a~~--- 133 (286)
.+|.+++|+.+.+.. ...++.. .+..+...++.++++++++.+.+ .|++++|++ ++..+++.+.
T Consensus 71 ~~p~v~~A~~~~l~~-~~~~~~~-------~~~~~~~~~la~~l~~~~~~~~~----~v~~~~sGseA~~~Aik~a~~~~ 138 (476)
T 3i5t_A 71 GRREIVDAMAHQAMV-LPYASPW-------YMATSPAARLAEKIATLTPGDLN----RIFFTTGGSTAVDSALRFSEFYN 138 (476)
T ss_dssp CCHHHHHHHHHHHHH-CCCCCTT-------TCBCHHHHHHHHHHHTTSSTTCC----EEEEESSHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHh-ccCcccC-------ccCCHHHHHHHHHHHhcCCCCcC----EEEEeCchHHHHHHHHHHHHHHH
Confidence 489999999988765 2111110 11234555677899998876553 488888877 8887877775
Q ss_pred -----CCCCeEEeccCCCCcccCc-----cccccccccccceeeeEEEecccCCCCCCCC--------HHHHHHHhhh--
Q 023191 134 -----KPHDRIMALDLPHGGHLSH-----GYQTDTKKISAVSIFFETMPYRLNESTGYID--------YDQLEKSATL-- 193 (286)
Q Consensus 134 -----~~Gd~Vl~~~~~~~~~~~~-----~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d--------~e~l~~~i~~-- 193 (286)
..+++|+++++.|.++..- +...++.........+..++.+.....+..| +++|++++.+
T Consensus 139 ~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~le~~i~~~~ 218 (476)
T 3i5t_A 139 NVLGRPQKKRIIVRYDGYHGSTALTAACTGRTGNWPNFDIAQDRISFLSSPNPRHAGNRSQEAFLDDLVQEFEDRIESLG 218 (476)
T ss_dssp HHTTCTTCCEEEEETTCCCCSSHHHHHTCCCGGGCTTSCCCCTTEEEECCCCGGGCTTSCHHHHHHHHHHHHHHHHHHHC
T ss_pred HhcCCCCCCEEEEEcCCcCcCChhhccccCChhhccccCCCCCCcEEeCCCcccccCCCchHHHHHHHHHHHHHHHHhcC
Confidence 3467999999888765411 1111111100001112233322210111222 7889988863
Q ss_pred -cCCcEEEEcCCC--CCCccC----HHHHHHHHHhcCCEEEEecccc-ccccccC--CC-CCCCCcceEEEeCCCCCCCC
Q 023191 194 -FRPKLIVAGASA--YARLYD----YERIRKVCNKQKAIMLADMAHI-SGLVAAG--VI-PSPFEYADVVTTTTHKSLRG 262 (286)
Q Consensus 194 -~~tk~v~i~~~n--~g~~~~----l~~I~~ia~~~~~~vivD~a~~-~g~~~~~--~~-~~~~~~~D~v~~s~~K~l~g 262 (286)
.++++|++++.+ .|...+ +++|.++|++||+++|+|++|. +|-.... .. ...+ ..|++++ .|+++|
T Consensus 219 ~~~~aavi~ep~~~~~G~~~~~~~~L~~l~~lc~~~gillI~DEv~~g~gr~G~~~~~~~~~~v-~pdi~t~--sK~l~~ 295 (476)
T 3i5t_A 219 PDTIAAFLAEPILASGGVIIPPAGYHARFKAICEKHDILYISDEVVTGFGRCGEWFASEKVFGV-VPDIITF--AKGVTS 295 (476)
T ss_dssp GGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHTTCC-CCSEEEE--CGGGGT
T ss_pred CCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccccCceeeecccCC-Ccchhhh--hhhhcC
Confidence 367788887444 343333 9999999999999999999986 2222110 01 1111 2677765 499876
Q ss_pred --CCceEEEEecchhhhhcc
Q 023191 263 --PRGAMIFFRKGVKEINKQ 280 (286)
Q Consensus 263 --p~gG~l~~~~~~~~~~~~ 280 (286)
.+.|++++++++.+...+
T Consensus 296 G~~plg~v~~~~~i~~~~~~ 315 (476)
T 3i5t_A 296 GYVPLGGLAISEAVLARISG 315 (476)
T ss_dssp TSSCCEEEEECHHHHHTTSG
T ss_pred CCcCeEEEEECHHHHHHHhc
Confidence 344999999988877664
No 223
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=99.49 E-value=4.7e-14 Score=130.08 Aligned_cols=206 Identities=12% Similarity=0.019 Sum_probs=124.6
Q ss_pred CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-HHHHHHHHhcC--
Q 023191 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLK-- 134 (286)
Q Consensus 58 ~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l~a~~~-- 134 (286)
.+|.+++++.+.+.... .+... .+..+...+++++++++++.+.+ .|++++|++ ++..++..+..
T Consensus 92 ~~p~v~~A~~~~~~~~~--~~~~~------~~~~~~~~~L~e~la~~~~~~~~----~v~~~~sGseA~~~Alk~a~~~~ 159 (457)
T 3tfu_A 92 GHPALDQALTTQLRVMN--HVMFG------GLTHEPAARLAKLLVDITPAGLD----TVFFSDSGSVSVEVAAKMALQYW 159 (457)
T ss_dssp TCHHHHHHHHHHHHHCS--CCCSS------SEECHHHHHHHHHHHHHSSTTEE----EEEEESSHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcc--Ccccc------ccCCHHHHHHHHHHHHhCCCCcC----EEEEeCcHHHHHHHHHHHHHHHH
Confidence 48999999988776521 11100 11123444577889999976653 588888888 88878877754
Q ss_pred -----CC-CeEEeccCCCCcccCccc------cccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhh--cCCcEEE
Q 023191 135 -----PH-DRIMALDLPHGGHLSHGY------QTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATL--FRPKLIV 200 (286)
Q Consensus 135 -----~G-d~Vl~~~~~~~~~~~~~~------~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~--~~tk~v~ 200 (286)
+| +.|+++++.|.+...... ..+.............++++.+ .....|+++|++++++ .++++|+
T Consensus 160 ~~~g~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~~~~~d~~~le~~l~~~~~~~aavi 238 (457)
T 3tfu_A 160 RGRGLPGKRRLMTWRGGYHGDTFLAMSICDPHGGMHSLWTDVLAAQVFAPQVPR-DYDPAYSAAFEAQLAQHAGELAAVV 238 (457)
T ss_dssp HHTTCTTCCEEEEETTCCCCSSHHHHTTSCCC----------CCCCEEECCCCS-SCCHHHHHHHHHHHHHHGGGEEEEE
T ss_pred HhcCCCCCceEEEEcCCcCCccHHhhcccCCcccccccccCCCCCceEecCCCc-ccCHHHHHHHHHHHHhCCCCEEEEE
Confidence 55 488888877765431110 0011000001111233443322 1123588999999973 2678888
Q ss_pred EcC-CC--CCCccC----HHHHHHHHHhcCCEEEEecccc-ccccccCCCCC-CCC-cceEEEeCCCCCCCC--CCceEE
Q 023191 201 AGA-SA--YARLYD----YERIRKVCNKQKAIMLADMAHI-SGLVAAGVIPS-PFE-YADVVTTTTHKSLRG--PRGAMI 268 (286)
Q Consensus 201 i~~-~n--~g~~~~----l~~I~~ia~~~~~~vivD~a~~-~g~~~~~~~~~-~~~-~~D~v~~s~~K~l~g--p~gG~l 268 (286)
+++ .+ .|...+ +++|.++|++||+++|+|++|. +|-.. ..... .+. ..|++ ++.|.++| ++.|++
T Consensus 239 ~ep~~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~gr~G-~~~a~~~~~~~pdii--t~sK~l~gG~~~lG~v 315 (457)
T 3tfu_A 239 VEPVVQGAGGMRFHDPRYLHDLRDICRRYEVLLIFDEIATGFGRTG-ALFAADHAGVSPDIM--CVGKALTGGYLSLAAT 315 (457)
T ss_dssp ECSSEECTTTCEECCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTS-SSSTHHHHTCCCSEE--EECGGGGTTSSCCEEE
T ss_pred EeCCCcCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcCccCCcccc-chhHhHhcCCCceEE--EEChhhhCCCcceEEE
Confidence 876 44 444443 9999999999999999999975 22111 11000 001 25777 55799977 466999
Q ss_pred EEecchhhhhc
Q 023191 269 FFRKGVKEINK 279 (286)
Q Consensus 269 ~~~~~~~~~~~ 279 (286)
++++++.+...
T Consensus 316 ~~~~~i~~~~~ 326 (457)
T 3tfu_A 316 LCTADVAHTIS 326 (457)
T ss_dssp EEEHHHHHHHH
T ss_pred EEcHHHHHHhh
Confidence 99999887764
No 224
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=99.49 E-value=3.6e-13 Score=123.06 Aligned_cols=207 Identities=13% Similarity=0.114 Sum_probs=126.4
Q ss_pred cCceecCCCC-----CCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCC
Q 023191 47 KGLELIPSEN-----FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSG 121 (286)
Q Consensus 47 ~~i~L~~~e~-----~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG 121 (286)
..+++..+.. ..++.+++++.+.+.+....++ ..+++.+++++++++++ ..+ +|++++|
T Consensus 57 ~~lD~~~~~~~~~lG~~~~~v~~a~~~~~~~~~~~~~-----------~~~~~~~l~~~la~~~~-~~~----~v~~~~s 120 (434)
T 2epj_A 57 RIVDLVLAYGPLILGHKHPRVLEAVEEALARGWLYGA-----------PGEAEVLLAEKILGYVK-RGG----MIRFVNS 120 (434)
T ss_dssp EEEESSGGGTTCTTCBTCHHHHHHHHHHHHTCSCCSS-----------CCHHHHHHHHHHHHHHC-TTC----EEEEESS
T ss_pred EEEEcccchhcccCCCCCHHHHHHHHHHHHhCCCCCC-----------CCHHHHHHHHHHHHhCC-CCC----EEEEeCC
Confidence 3467665531 2589999999988865211111 12344456677777774 332 4888888
Q ss_pred hH-HHHHHHHHh--cCCCCeEEeccCCCCcccCccccccccc------ccccee------eeEEEecccCCCCCCCCHHH
Q 023191 122 SP-SNFQVYTAL--LKPHDRIMALDLPHGGHLSHGYQTDTKK------ISAVSI------FFETMPYRLNESTGYIDYDQ 186 (286)
Q Consensus 122 ~~-a~~~~l~a~--~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~------~~~~g~------~~~~v~~~~~~~~~~~d~e~ 186 (286)
++ ++.+++++. +.++++|+++++.|.++........... ....|. .+..++ . .|+++
T Consensus 121 gseA~~~al~~ar~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~--~------~d~~~ 192 (434)
T 2epj_A 121 GTEATMTAIRLARGYTGRDLILKFDGCYHGSHDAVLVAAGSAAAHYGVPTSAGVPEAVARLTLVTP--Y------NDVEA 192 (434)
T ss_dssp HHHHHHHHHHHHHHHHCCCEEEEEETCCCCSSGGGSEECC------CEESSTTCCHHHHTTEEEEE--T------TCHHH
T ss_pred HHHHHHHHHHHHHHhhCCCeEEEEcCCcCCCCHHHHHhcCCCccccCCCCCCCCCCcccCceEecC--C------CCHHH
Confidence 88 888777761 3456788888877766432111000000 000111 122222 1 38999
Q ss_pred HHHHhhh--cCCcEEEEcCCC--CCCccC----HHHHHHHHHhcCCEEEEeccccccccccCCCCC-CCC-cceEEEeCC
Q 023191 187 LEKSATL--FRPKLIVAGASA--YARLYD----YERIRKVCNKQKAIMLADMAHISGLVAAGVIPS-PFE-YADVVTTTT 256 (286)
Q Consensus 187 l~~~i~~--~~tk~v~i~~~n--~g~~~~----l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~-~~~-~~D~v~~s~ 256 (286)
|++.+++ .++++|+++|.+ +|...+ +++|.++|++||+++|+|++|+ |......... .+. ..|++ |+
T Consensus 193 le~~l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~-g~~~g~~~~~~~~~~~~di~--s~ 269 (434)
T 2epj_A 193 LERVFAEYGDRIAGVIVEPVIANAGVIPPRREFLAALQRLSRESGALLILDEVVT-GFRLGLEGAQGYFNIEGDII--VL 269 (434)
T ss_dssp HHHHHHHHGGGEEEEEECSSBCSSSCBCCCHHHHHHHHHHHHHHTCEEEEEETTT-TTTSSTTHHHHHHTCCCSEE--EE
T ss_pred HHHHHHhCCCCEEEEEEeCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEcchh-ceeCCcchhhHHhCCCCCee--ee
Confidence 9999874 267788877543 566777 9999999999999999999987 4421110000 001 26765 55
Q ss_pred CCCCCC-CCceEEEEecchhhhhcc
Q 023191 257 HKSLRG-PRGAMIFFRKGVKEINKQ 280 (286)
Q Consensus 257 ~K~l~g-p~gG~l~~~~~~~~~~~~ 280 (286)
+|+|++ .+.|++++++++.+..+.
T Consensus 270 sK~l~~G~~~G~v~~~~~~~~~l~~ 294 (434)
T 2epj_A 270 GKIIGGGFPVGAVAGSREVMSLLTP 294 (434)
T ss_dssp EGGGGTTSSCEEEEECHHHHTTBTT
T ss_pred cchhcCCcceeeeeecHHHHHhhcc
Confidence 699866 356999999887766654
No 225
>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*
Probab=99.49 E-value=5.7e-13 Score=121.56 Aligned_cols=206 Identities=13% Similarity=0.062 Sum_probs=122.6
Q ss_pred cCceecCCCC-----CCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCC
Q 023191 47 KGLELIPSEN-----FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSG 121 (286)
Q Consensus 47 ~~i~L~~~e~-----~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG 121 (286)
+.+++..+.. ..+|++++++.+.+......++ ...... +++++++++++ ..+ .|++++|
T Consensus 54 ~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~~~~-------~~~~~~----~l~~~la~~~~-~~~----~v~~~~~ 117 (429)
T 3k28_A 54 EYIDYVLSWGPLIHGHANDRVVEALKAVAERGTSFGA-------PTEIEN----KLAKLVIERVP-SIE----IVRMVNS 117 (429)
T ss_dssp EEEESCGGGTTCTTCBSCHHHHHHHHHHHHHCSCCSS-------CCHHHH----HHHHHHHHHST-TCS----EEEEESS
T ss_pred EEEECCCChhhcccCCCCHHHHHHHHHHHhhCcCcCC-------CCHHHH----HHHHHHHHhCC-CCC----EEEEeCC
Confidence 3466654432 2589999999988765221111 122333 35577777776 343 5888888
Q ss_pred hH-HHHHHHHHhc--CCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCC------------CCCHHH
Q 023191 122 SP-SNFQVYTALL--KPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTG------------YIDYDQ 186 (286)
Q Consensus 122 ~~-a~~~~l~a~~--~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~------------~~d~e~ 186 (286)
++ ++..++..+. .++++|+++++.|.+....... ..|......+.+.. ... .-|+++
T Consensus 118 Gsea~~~ai~~a~~~~~~~~vi~~~~~yhg~~~~~~~-------~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~d~~~ 189 (429)
T 3k28_A 118 GTEATMSALRLARGYTGRNKILKFIGCYHGHGDSLLI-------KAGSGVATLGLPDS-PGVPEGVAKNTITVAYNDLES 189 (429)
T ss_dssp HHHHHHHHHHHHHHHHTCCEEEEEETCCCCSCGGGCS-------SCCTTC-----CCC-TTCCHHHHTTEEEEETTCHHH
T ss_pred hHHHHHHHHHHHHHhhCCCEEEEECCCcCCCcHHHHH-------hcCCcccccCCCCc-CCCCCcccCceeecCCCCHHH
Confidence 88 8887777664 3778999988777654321110 01100000110000 000 018999
Q ss_pred HHHHhhh--cCCcEEEEcCCC--CCCccC----HHHHHHHHHhcCCEEEEeccccccccccCCCC-C-CCC-cceEEEeC
Q 023191 187 LEKSATL--FRPKLIVAGASA--YARLYD----YERIRKVCNKQKAIMLADMAHISGLVAAGVIP-S-PFE-YADVVTTT 255 (286)
Q Consensus 187 l~~~i~~--~~tk~v~i~~~n--~g~~~~----l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~-~-~~~-~~D~v~~s 255 (286)
+++++++ .++++|++++.| .|...+ +++|.++|++||+++|+|++|. |. ..+... . .+. ..|+++
T Consensus 190 le~~l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~-g~-~~g~~~~~~~~~~~~di~t-- 265 (429)
T 3k28_A 190 VKYAFEQFGDDIACVIVEPVAGNMGVVPPQPGFLEGLREVTEQNGALLIFDEVMT-GF-RVAYNCGQGYYGVTPDLTC-- 265 (429)
T ss_dssp HHHHHHHHGGGEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEECTTT-TT-TSSTTHHHHHHTCCCSEEE--
T ss_pred HHHHHHhCCCCEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecccc-cc-ccCcchHHHHhCCCCceeh--
Confidence 9998874 256777776544 345555 9999999999999999999984 33 211100 0 000 256655
Q ss_pred CCCCCCC-CCceEEEEecchhhhhcc
Q 023191 256 THKSLRG-PRGAMIFFRKGVKEINKQ 280 (286)
Q Consensus 256 ~~K~l~g-p~gG~l~~~~~~~~~~~~ 280 (286)
++|+|++ .+.|++++++++.+..++
T Consensus 266 ~sK~~~~G~~iG~~~~~~~~~~~~~~ 291 (429)
T 3k28_A 266 LGKVIGGGLPVGAYGGKAEIMRQVAP 291 (429)
T ss_dssp ECGGGGTTSCCEEEEECHHHHTTBTT
T ss_pred hhhhhcCCCCeEEEEEcHHHHhhhcc
Confidence 5698865 445999999988777654
No 226
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=99.48 E-value=1.9e-13 Score=126.58 Aligned_cols=205 Identities=12% Similarity=0.043 Sum_probs=124.9
Q ss_pred CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-HHHHHHHHhcC--
Q 023191 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLK-- 134 (286)
Q Consensus 58 ~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l~a~~~-- 134 (286)
.+|.+++|+.+.+.... ..+.. ..+..+...+++++++++++.+.+ .|++++|++ ++..+++.+..
T Consensus 72 ~~p~v~~A~~~~~~~~~-~~~~~------~~~~~~~~~~lae~l~~~~~~~~~----~v~~~~sGseA~~~aik~a~~~~ 140 (472)
T 3hmu_A 72 GRDELAEVAARQMRELP-YYNTF------FKTTHVPAIALAQKLAELAPGDLN----HVFFAGGGSEANDTNIRMVRTYW 140 (472)
T ss_dssp CCHHHHHHHHHHHHHCS-CCCSS------SSEECHHHHHHHHHHHHHSCTTEE----EEEEESSHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcc-ccccc------cccCCHHHHHHHHHHHHhCCCCCC----EEEEeCCHHHHHHHHHHHHHHHH
Confidence 47999999988876521 11111 112234455577888888876553 588888888 88888887753
Q ss_pred ------CCCeEEeccCCCCcccCcccc-----cccccc-ccceeeeEEEeccc--CCCCCCCC--------HHHHHHHhh
Q 023191 135 ------PHDRIMALDLPHGGHLSHGYQ-----TDTKKI-SAVSIFFETMPYRL--NESTGYID--------YDQLEKSAT 192 (286)
Q Consensus 135 ------~Gd~Vl~~~~~~~~~~~~~~~-----~~~~~~-~~~g~~~~~v~~~~--~~~~~~~d--------~e~l~~~i~ 192 (286)
++++|+++++.|.++..-... .++... ...+ +..++.+. +.+++ .| +++|+++++
T Consensus 141 ~~~g~~~~~~ii~~~~~yHg~t~~~~~~~~~~~~~~~~~~~~~--~~~v~~p~~~~~~~~-~~~~~~~~~~~~~le~~i~ 217 (472)
T 3hmu_A 141 QNKGQPEKTVIISRKNAYHGSTVASSALGGMAGMHAQSGLIPD--VHHINQPNWWAEGGD-MDPEEFGLARARELEEAIL 217 (472)
T ss_dssp HHTTCTTCCEEEEETTCCCCSSHHHHHHSCCHHHHHTTCCCSS--EEEECCCCHHHHCTT-CCHHHHHHHHHHHHHHHHH
T ss_pred HhcCCCCCCEEEEEcCcCCCccHHhhhccCChhhccccCCCCC--cEEeCCCccccCCcc-cCHHHHHHHHHHHHHHHHH
Confidence 578999999777665311100 000000 0112 33344222 10112 34 788888886
Q ss_pred h---cCCcEEEEcCCC--CCCccC----HHHHHHHHHhcCCEEEEecccc-ccccccCCCCC-CCC-cceEEEeCCCCCC
Q 023191 193 L---FRPKLIVAGASA--YARLYD----YERIRKVCNKQKAIMLADMAHI-SGLVAAGVIPS-PFE-YADVVTTTTHKSL 260 (286)
Q Consensus 193 ~---~~tk~v~i~~~n--~g~~~~----l~~I~~ia~~~~~~vivD~a~~-~g~~~~~~~~~-~~~-~~D~v~~s~~K~l 260 (286)
+ .++++|+++|.+ .|...+ +++|.++|++||+++|+|++|. +|-.. ..... .+. ..|++++ .|++
T Consensus 218 ~~~~~~~aavi~epv~~~gG~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G-~~~a~~~~~v~pdi~t~--sK~l 294 (472)
T 3hmu_A 218 ELGENRVAAFIAEPVQGAGGVIVAPDSYWPEIQRICDKYDILLIADEVICGFGRTG-NWFGTQTMGIRPHIMTI--AKGL 294 (472)
T ss_dssp HHCGGGEEEEEECSSBSTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTS-SSCHHHHHTCCCSEEEE--CGGG
T ss_pred hcCCCCEEEEEEcCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEccccCCcccC-ccchhHHhCCCCceeee--chhh
Confidence 3 256778777544 344554 9999999999999999999986 32221 11000 001 2677765 4998
Q ss_pred CC--CCceEEEEecchhhhhc
Q 023191 261 RG--PRGAMIFFRKGVKEINK 279 (286)
Q Consensus 261 ~g--p~gG~l~~~~~~~~~~~ 279 (286)
+| .+.|++++++++.+..+
T Consensus 295 ~gg~~plG~v~~~~~i~~~~~ 315 (472)
T 3hmu_A 295 SSGYAPIGGSIVCDEVAHVIG 315 (472)
T ss_dssp TTTSSCCEEEEEEHHHHHHHT
T ss_pred hcCCcceEEEEECHHHHHhcc
Confidence 77 45599999999887773
No 227
>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}
Probab=99.48 E-value=1.9e-13 Score=124.54 Aligned_cols=208 Identities=15% Similarity=0.064 Sum_probs=126.3
Q ss_pred cCceecCCC--C---CCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCC
Q 023191 47 KGLELIPSE--N---FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSG 121 (286)
Q Consensus 47 ~~i~L~~~e--~---~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG 121 (286)
..+++..+. + ..++.+++++.+.+.... .+ + +..+++.+++++++++++ +.+ +|++++|
T Consensus 53 ~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~--~~------~---~~~~~~~~l~~~l~~~~~-~~~----~v~~~~~ 116 (424)
T 2e7u_A 53 RYLDYVMSWGPLILGHAHPKVLARVRETLERGL--TF------G---APSPLEVALAKKVKRAYP-FVD----LVRFVNS 116 (424)
T ss_dssp EEEESSGGGTTCTTCBTCHHHHHHHHHHHHTCS--CC------S---SCCHHHHHHHHHHHHHCT-TCC----EEEEESS
T ss_pred EEEEccccccccccCCCCHHHHHHHHHHHHhCC--CC------C---CCCHHHHHHHHHHHHhCC-CCC----EEEEeCC
Confidence 346776554 2 358999999998886521 11 1 112445556688888885 443 5888888
Q ss_pred hH-HHHHHHHH--hcCCCCeEEeccCCCCcccCccccccccc------cccceee----eEEEecccCCCCCCCCHHHHH
Q 023191 122 SP-SNFQVYTA--LLKPHDRIMALDLPHGGHLSHGYQTDTKK------ISAVSIF----FETMPYRLNESTGYIDYDQLE 188 (286)
Q Consensus 122 ~~-a~~~~l~a--~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~------~~~~g~~----~~~v~~~~~~~~~~~d~e~l~ 188 (286)
++ ++.++++. .+.+++.|+++++.|.++........... ....|.. ...++++. .|+++|+
T Consensus 117 g~ea~~~al~~ar~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~------~d~~~le 190 (424)
T 2e7u_A 117 GTEATMSALRLARGYTGRPYIVKFRGNYHGHADGLLVEAGSGALTLGVPSSAGVPEEYAKLTLVLEY------NDPEGLR 190 (424)
T ss_dssp HHHHHHHHHHHHHHHHCCCEEEEETTCCCCCCGGGSEECCSSSCCBCEESSTTCCHHHHTTEEEECT------TCHHHHH
T ss_pred HHHHHHHHHHHHHHhhCCCEEEEECCCcCCCcHHHHHhcCCcccccCCCCCCCCCCccCCceEeCCC------CCHHHHH
Confidence 87 88777765 23345788888877766432111000000 0011110 01122121 3899999
Q ss_pred HHhhh--cCCcEEEEcCCC--CCCccC----HHHHHHHHHhcCCEEEEeccccccccccCCCCC-CCC-cceEEEeCCCC
Q 023191 189 KSATL--FRPKLIVAGASA--YARLYD----YERIRKVCNKQKAIMLADMAHISGLVAAGVIPS-PFE-YADVVTTTTHK 258 (286)
Q Consensus 189 ~~i~~--~~tk~v~i~~~n--~g~~~~----l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~-~~~-~~D~v~~s~~K 258 (286)
+.+++ .++++|+++|.| +|...+ +++|.++ ++||+++|+|++|+ |......... .+. ..|++ |++|
T Consensus 191 ~~l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l-~~~g~~lI~DEv~~-g~~~g~~~~~~~~~~~~di~--s~sK 266 (424)
T 2e7u_A 191 EVLKRRGEEIAAIIFEPVVGNAGVLVPTEDFLKALHEA-KAYGVLLIADEVMT-GFRLAFGGATELLGLKPDLV--TLGK 266 (424)
T ss_dssp HHHHHHGGGEEEEEECSSBCTTSCBCCCHHHHHHHHHG-GGGTCEEEEECTTT-TTTSSTTHHHHHHTCCCSEE--EECG
T ss_pred HHHHhCCCCEEEEEEeCCCCCCCCcCCCHHHHHHHHHH-HHcCCEEEEecCcc-ccccchhHHHHHhCCCcchh--hhhh
Confidence 98873 267777776544 566666 9999999 99999999999987 4421111000 001 25765 6679
Q ss_pred CCCCC-CceEEEEecchhhhhcc
Q 023191 259 SLRGP-RGAMIFFRKGVKEINKQ 280 (286)
Q Consensus 259 ~l~gp-~gG~l~~~~~~~~~~~~ 280 (286)
+|+++ +.|++++++++.+..++
T Consensus 267 ~l~~G~~~G~~~~~~~~~~~~~~ 289 (424)
T 2e7u_A 267 ILGGGLPAAAYAGRREIMEKVAP 289 (424)
T ss_dssp GGGTTSSCEEEEECHHHHTTBTT
T ss_pred hhhCCcceEEEEEcHHHHhhhcc
Confidence 99753 55999999888776654
No 228
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=99.45 E-value=5.7e-13 Score=122.64 Aligned_cols=210 Identities=10% Similarity=-0.014 Sum_probs=121.5
Q ss_pred CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-HHHHHHHHhc--C
Q 023191 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALL--K 134 (286)
Q Consensus 58 ~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l~a~~--~ 134 (286)
.+|.+++++.+.+.... .+.. ..+..+.+.+++++++++++.+.. .+|++++|++ ++.++++... .
T Consensus 81 ~~p~v~~A~~~~~~~~~--~~~~------~~~~~~~~~~la~~l~~~~~~~~~---~~v~~~~sGseA~~~alk~a~~~~ 149 (453)
T 4ffc_A 81 SHPAVAAAIADQATHFT--HTCF------MVTPYEQYVQVAELLNALTPGDHD---KRTALFNSGAEAVENAIKVARLAT 149 (453)
T ss_dssp TCHHHHHHHHHHHHHCS--CCTT------TTSCCHHHHHHHHHHHHHSSCSSC---EEEEEESSHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcc--cccc------CcCCCHHHHHHHHHHHHhCCCCCC---cEEEEeCcHHHHHHHHHHHHHHhc
Confidence 48999999988875521 1111 112234555677889999875421 2588888888 8887776553 3
Q ss_pred CCCeEEeccCCCCcccCcccc------ccccccccceeeeEEEecccCC-CCCCCC--------HHHHHHHhhhcCCcEE
Q 023191 135 PHDRIMALDLPHGGHLSHGYQ------TDTKKISAVSIFFETMPYRLNE-STGYID--------YDQLEKSATLFRPKLI 199 (286)
Q Consensus 135 ~Gd~Vl~~~~~~~~~~~~~~~------~~~~~~~~~g~~~~~v~~~~~~-~~~~~d--------~e~l~~~i~~~~tk~v 199 (286)
.++.|+++++.|.++...... .++.........+..++++... +.+..+ ++.|++.+.+.++++|
T Consensus 150 g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~i~~~~~aav 229 (453)
T 4ffc_A 150 GRPAVVAFDNAYHGRTNLTMALTAKSMPYKSQFGPFAPEVYRMPASYPLRDEPGLTGEEAARRAISRIETQIGAQSLAAI 229 (453)
T ss_dssp CCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCTTTSCTTCCHHHHHHHHHHHHHHHTCGGGEEEE
T ss_pred CCCEEEEEcCccCCcchHHHhhcCCCcccccCCCCCCCCcEEeCCCccccCccccchHHHHHHHHHHHHHhcCCCCEEEE
Confidence 568999999887755321100 1111111111123444443211 111222 4566666654345666
Q ss_pred EEcCCC-CC-CccC----HHHHHHHHHhcCCEEEEecccc-ccccccCCCCCC-CC-cceEEEeCCCCCCCC-CCceEEE
Q 023191 200 VAGASA-YA-RLYD----YERIRKVCNKQKAIMLADMAHI-SGLVAAGVIPSP-FE-YADVVTTTTHKSLRG-PRGAMIF 269 (286)
Q Consensus 200 ~i~~~n-~g-~~~~----l~~I~~ia~~~~~~vivD~a~~-~g~~~~~~~~~~-~~-~~D~v~~s~~K~l~g-p~gG~l~ 269 (286)
+++|.| ++ ...+ +++|.++|++||+++|+|++|. +|... ...... +. ..|++++ .|++++ .+.|+++
T Consensus 230 i~ep~~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g-~~~a~~~~~~~pdi~t~--sK~~~~G~~~G~~~ 306 (453)
T 4ffc_A 230 IIEPIQGEGGFIVPAPGFLATLTAWASENGVVFIADEVQTGFARTG-AWFASEHEGIVPDIVTM--AKGIAGGMPLSAVT 306 (453)
T ss_dssp EECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTS-SSSTHHHHTCCCSEEEE--CGGGGTTSSCEEEE
T ss_pred EEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccCCCccc-ccchhhhcCCCcchHhh--hhhhcCCcCeEEEE
Confidence 666555 33 4444 9999999999999999999975 22111 110000 00 2566654 598854 3449999
Q ss_pred EecchhhhhccC
Q 023191 270 FRKGVKEINKQG 281 (286)
Q Consensus 270 ~~~~~~~~~~~~ 281 (286)
+++++.+..++.
T Consensus 307 ~~~~i~~~~~~~ 318 (453)
T 4ffc_A 307 GRAELMDAVYAG 318 (453)
T ss_dssp EEHHHHTTSCTT
T ss_pred ECHHHHhhhccc
Confidence 999887766543
No 229
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=99.43 E-value=2.7e-12 Score=118.05 Aligned_cols=210 Identities=10% Similarity=0.033 Sum_probs=120.6
Q ss_pred CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-HHHHHHHHhc--C
Q 023191 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALL--K 134 (286)
Q Consensus 58 ~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l~a~~--~ 134 (286)
.+|.+++++.+.+.... .+.. ..+..+.+.+++++++++++.+.. ..|++++|++ ++.++++... .
T Consensus 78 ~~p~v~~A~~~~~~~~~--~~~~------~~~~~~~~~~la~~l~~~~~~~~~---~~v~~~~sGseA~~~Alk~a~~~~ 146 (451)
T 3oks_A 78 SAPKVVEAVRSQVGDFT--HTCF------MVTPYEGYVAVCEQLNRLTPVRGD---KRSALFNSGSEAVENAVKIARSHT 146 (451)
T ss_dssp TCHHHHHHHHHHHTTCS--CCTT------TTSCCHHHHHHHHHHHHHSSCCSS---EEEEEESSHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcc--cccC------CccCCHHHHHHHHHHHHhCCcCCC---CEEEEeCcHHHHHHHHHHHHHHhc
Confidence 48999999988875521 1111 112234555677889988875421 2588888888 8887776664 3
Q ss_pred CCCeEEeccCCCCcccCcccc------ccccccccceeeeEEEeccc---------CCCC-CCCCHHHHHHHhh----hc
Q 023191 135 PHDRIMALDLPHGGHLSHGYQ------TDTKKISAVSIFFETMPYRL---------NEST-GYIDYDQLEKSAT----LF 194 (286)
Q Consensus 135 ~Gd~Vl~~~~~~~~~~~~~~~------~~~~~~~~~g~~~~~v~~~~---------~~~~-~~~d~e~l~~~i~----~~ 194 (286)
.++.|+++++.|.+....... .++.........+..++++. +.+. ..-+++.+++.+. ..
T Consensus 147 g~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~~ 226 (451)
T 3oks_A 147 HKPAVVAFDHAYHGRTNLTMALTAKVMPYKDGFGPFAPEIYRAPLSYPFRDAEFGKELATDGELAAKRAITVIDKQIGAD 226 (451)
T ss_dssp CCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTCCSCCSSEEEECCCCHHHHGGGCTTTTTCHHHHHHHHHHHHHHHTCGG
T ss_pred CCCeEEEEcCCcCCccHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccccchhhHHHHHHHHHHHHhhcCCC
Confidence 558899998877765421100 11111111111234454331 1000 0113454545443 23
Q ss_pred CCcEEEEcCCC-CC-CccC----HHHHHHHHHhcCCEEEEeccccccccccCC-CC-CCCC-cceEEEeCCCCCCCC-CC
Q 023191 195 RPKLIVAGASA-YA-RLYD----YERIRKVCNKQKAIMLADMAHISGLVAAGV-IP-SPFE-YADVVTTTTHKSLRG-PR 264 (286)
Q Consensus 195 ~tk~v~i~~~n-~g-~~~~----l~~I~~ia~~~~~~vivD~a~~~g~~~~~~-~~-~~~~-~~D~v~~s~~K~l~g-p~ 264 (286)
++++|++.|.| ++ ...+ +++|.++|++||+++|+|++|. |....+. .. ..+. ..|++ +++|+|++ .+
T Consensus 227 ~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~-g~g~~g~~~~~~~~~~~pdi~--t~sK~l~~G~~ 303 (451)
T 3oks_A 227 NLAAVVIEPIQGEGGFIVPADGFLPTLLDWCRKNDVVFIADEVQT-GFARTGAMFACEHEGIDPDLI--VTAKGIAGGLP 303 (451)
T ss_dssp GEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTT-TTTTTSSSSGGGGGTCCCSEE--EECGGGGTTSS
T ss_pred CEEEEEEcCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEeccc-CCCccccchhhhhcCCCCCee--eehhhhhCCcc
Confidence 56677776544 33 4444 9999999999999999999986 2211111 00 0001 25776 45699855 34
Q ss_pred ceEEEEecchhhhhccC
Q 023191 265 GAMIFFRKGVKEINKQG 281 (286)
Q Consensus 265 gG~l~~~~~~~~~~~~~ 281 (286)
.|++++++++.+..+++
T Consensus 304 iG~v~~~~~~~~~~~~~ 320 (451)
T 3oks_A 304 LSAVTGRAEIMDSPHVS 320 (451)
T ss_dssp CEEEEEEHHHHTCSCTT
T ss_pred eEEEEECHHHHhhhcCC
Confidence 49999999887766543
No 230
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=99.42 E-value=6.1e-13 Score=122.29 Aligned_cols=199 Identities=11% Similarity=0.068 Sum_probs=117.1
Q ss_pred CCHHHH-H-Hhcc---ccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCC-CCCCCcceeEEeCCChH-HHHHHHH
Q 023191 58 TSVSVM-Q-AVGS---VMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFR-LDPEKWGVNVQSLSGSP-SNFQVYT 130 (286)
Q Consensus 58 ~~~~v~-~-a~~~---~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g-~~~~~~~~~v~~~sG~~-a~~~~l~ 130 (286)
.+|.++ + ++.+ .+.... .+. . .| ..+...++++.++++++ .+.+ +|++++|++ ++.+++.
T Consensus 71 ~~p~v~~~~A~~~~~~~~~~~~--~~~-~-~~-----~~~~~~~la~~la~~~~~~~~~----~v~~~~~gseA~~~aik 137 (449)
T 2cjg_A 71 NPPALVDDREFHAELMQAALNK--PSN-S-DV-----YSVAMARFVETFARVLGDPALP----HLFFVEGGALAVENALK 137 (449)
T ss_dssp SCHHHHTCHHHHHHHHHHHTCC--CCT-T-TC-----CCHHHHHHHHHHHHHHCCTTCC----EEEEESSHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcC--CCC-c-cc-----CCHHHHHHHHHHHHhcCCCCCC----EEEEeCchHHHHHHHHH
Confidence 489999 8 8888 554421 111 1 11 12333445577777776 3443 599988888 8877765
Q ss_pred Hhc---C----------C-CCeEEeccCCCCcccCcccccc------ccccccceeeeEEEecccCCC-CC--------C
Q 023191 131 ALL---K----------P-HDRIMALDLPHGGHLSHGYQTD------TKKISAVSIFFETMPYRLNES-TG--------Y 181 (286)
Q Consensus 131 a~~---~----------~-Gd~Vl~~~~~~~~~~~~~~~~~------~~~~~~~g~~~~~v~~~~~~~-~~--------~ 181 (286)
... . + ||+|+++++.|.++........ +.+..-....+..+| .+.. .. .
T Consensus 138 ~a~~~~~~~~~~~~~~~~~~~~Vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~d~~~~~~~~~~~~~ 215 (449)
T 2cjg_A 138 AAFDWKSRHNQAHGIDPALGTQVLHLRGAFHGRSGYTLSLTNTKPTITARFPKFDWPRIDAP--YMRPGLDEPAMAALEA 215 (449)
T ss_dssp HHHHHHHHHHHHTTSCTTCCCEEEEETTCCCCSSTTGGGTCCSCHHHHTTSCCCCCCEECCC--CCCTTCCHHHHHHHHH
T ss_pred HHHHHhcccccccccccCCCCEEEEECCCcCCcccchhhhcCCchhhcccCCCCCCCcEEEc--CCCchhhccccchhhH
Confidence 432 2 2 8999999988876643221111 111100111122232 3210 11 2
Q ss_pred CCHHHHHHHhhh--cCCcEEEEcCCC--CCCccC----HHHHHHHHHhcCCEEEEecccc-ccccccCCCCCC-CC-cce
Q 023191 182 IDYDQLEKSATL--FRPKLIVAGASA--YARLYD----YERIRKVCNKQKAIMLADMAHI-SGLVAAGVIPSP-FE-YAD 250 (286)
Q Consensus 182 ~d~e~l~~~i~~--~~tk~v~i~~~n--~g~~~~----l~~I~~ia~~~~~~vivD~a~~-~g~~~~~~~~~~-~~-~~D 250 (286)
.|+++|++.+++ .++++|++++.| +|...+ +++|.++|++||+++|+|++|. +|... ...... +. ..|
T Consensus 216 ~~~~~le~~i~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g-~~~~~~~~~~~~d 294 (449)
T 2cjg_A 216 EALRQARAAFETRPHDIACFVAEPIQGEGGDRHFRPEFFAAMRELCDEFDALLIFDEVQTGCGLTG-TAWAYQQLDVAPD 294 (449)
T ss_dssp HHHHHHHHHHHHSTTTEEEEEECSEETTTTCEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTS-SSSTHHHHTCCCS
T ss_pred HHHHHHHHHHHhcCCceEEEEEeCcCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccccCCCccC-cceeecccCCCce
Confidence 466779988862 267888887543 465555 9999999999999999999987 32221 111000 01 257
Q ss_pred EEEeCCCCCCCCCCceEEEEecchhhh
Q 023191 251 VVTTTTHKSLRGPRGAMIFFRKGVKEI 277 (286)
Q Consensus 251 ~v~~s~~K~l~gp~gG~l~~~~~~~~~ 277 (286)
+++ ++|+| | .|++++++++.+.
T Consensus 295 i~t--~sK~l--~-iG~~~~~~~~~~~ 316 (449)
T 2cjg_A 295 IVA--FGKKT--Q-VCGVMAGRRVDEV 316 (449)
T ss_dssp EEE--ECGGG--S-SEEEEECGGGGGS
T ss_pred EEE--ecCcc--c-EEEEEECHHHhhh
Confidence 765 45998 3 5778888887764
No 231
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=99.19 E-value=7.9e-11 Score=108.89 Aligned_cols=202 Identities=13% Similarity=0.139 Sum_probs=114.1
Q ss_pred CCHHHHHHhccccccC-CCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-HHHHHHHHhc--
Q 023191 58 TSVSVMQAVGSVMTNK-YSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALL-- 133 (286)
Q Consensus 58 ~~~~v~~a~~~~l~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l~a~~-- 133 (286)
.+|++++++.+.+... +..+ . .++. ....++++.+.+++.++++...+ .|++++|++ |+.++++...
T Consensus 80 ~~p~v~~A~~~~~~~~~~~~~--~--~~~~-~~~~~l~~~la~~l~~~~~~~~~----~v~f~~sGseA~~~Aik~a~~~ 150 (472)
T 1ohv_A 80 SHPALVKLVQQPQNVSTFINR--P--ALGI-LPPENFVEKLRESLLSVAPKGMS----QLITMACGSCSNENAFKTIFMW 150 (472)
T ss_dssp TCHHHHHHHHCGGGHHHHHCC--C--CTTT-SCBTTHHHHHHHTGGGGCCTTCC----EEEEESSHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhhcccccc--c--cccc-ccHHHHHHHHHHHHHHhCCCCcC----EEEEeCCchhHHHHHHHHHHHH
Confidence 4899999998876421 1001 0 1121 22346666666767777654443 488877777 8887777663
Q ss_pred ------C-----------------CC---CeEEeccCCCCcccCccccccc-cccccceee---eEEEecccCC-C---C
Q 023191 134 ------K-----------------PH---DRIMALDLPHGGHLSHGYQTDT-KKISAVSIF---FETMPYRLNE-S---T 179 (286)
Q Consensus 134 ------~-----------------~G---d~Vl~~~~~~~~~~~~~~~~~~-~~~~~~g~~---~~~v~~~~~~-~---~ 179 (286)
. || ++|++++..|.++......+-. ......+.. +..++++... . .
T Consensus 151 ~~~~~~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~~yHg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 230 (472)
T 1ohv_A 151 YRSKERGQSAFSKEELETCMINQAPGCPDYSILSFMGAFHGRTMGCLATTHSKAIHKIDIPSFDWPIAPFPRLKYPLEEF 230 (472)
T ss_dssp HHHHHHTTCCCCHHHHHHHHTTCTTTSCCCEEEEETTCCCCSSHHHHHHCCSCHHHHTTSCCCCCCEECCCCCCSSGGGC
T ss_pred hhhhccCcccccccccccccccccccCCCCeEEEECCCcccccHHHHhcCCCccccccCCCCCCCcccCCCcccCccccc
Confidence 1 56 8999999777765321110000 000000000 0112221100 0 0
Q ss_pred --C-----CCCHHHHHHHhhhc-----CCcEEEEcC--CCCCCccC----HHHHHHHHHhcCCEEEEecccc-cccccc-
Q 023191 180 --G-----YIDYDQLEKSATLF-----RPKLIVAGA--SAYARLYD----YERIRKVCNKQKAIMLADMAHI-SGLVAA- 239 (286)
Q Consensus 180 --~-----~~d~e~l~~~i~~~-----~tk~v~i~~--~n~g~~~~----l~~I~~ia~~~~~~vivD~a~~-~g~~~~- 239 (286)
+ ..|+++|+++++++ ++++|++.+ +++|...+ +++|.++|++||+++|+|++|. +|....
T Consensus 231 ~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~vive~v~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~ 310 (472)
T 1ohv_A 231 VKENQQEEARCLEEVEDLIVKYRKKKKTVAGIIVEPIQSEGGDNHASDDFFRKLRDISRKHGCAFLVDEVQTGGGSTGKF 310 (472)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECSSBCTTTCBCCCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSS
T ss_pred cccchhHHHHHHHHHHHHHHhcCCCCCCEEEEEEcCCcCCCCCCCCCHHHHHHHHHHHHHhCCEEEEeCcccCCCCCCCc
Confidence 0 23688999988753 688888863 33676666 9999999999999999999987 332211
Q ss_pred -CCCCCCCC-cceEEEeCCCCC-CCCCCceEEEEecch
Q 023191 240 -GVIPSPFE-YADVVTTTTHKS-LRGPRGAMIFFRKGV 274 (286)
Q Consensus 240 -~~~~~~~~-~~D~v~~s~~K~-l~gp~gG~l~~~~~~ 274 (286)
.....++. ..|++++ .|+ ++ ||+++ ++++
T Consensus 311 ~~~~~~gv~~~~Di~t~--sK~~l~---GG~~~-~~~~ 342 (472)
T 1ohv_A 311 WAHEHWGLDDPADVMTF--SKKMMT---GGFFH-KEEF 342 (472)
T ss_dssp SGGGGGCCSSCCSEEEE--CGGGSS---EEEEE-CGGG
T ss_pred hhccccCCCCCCCEEEE--cccccc---CCccC-chhh
Confidence 11111111 1677654 498 44 47766 5554
No 232
>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*
Probab=98.82 E-value=1.7e-12 Score=119.68 Aligned_cols=204 Identities=12% Similarity=0.053 Sum_probs=122.4
Q ss_pred cCceecCCCCC-----CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCC
Q 023191 47 KGLELIPSENF-----TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSG 121 (286)
Q Consensus 47 ~~i~L~~~e~~-----~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG 121 (286)
+.|++..+..+ .+|.|++++.+.+......++ ..+...++.+.++++++ ..+ .++++++
T Consensus 101 ~yiD~~~~~~~~~lGh~~p~V~~Av~~q~~~~~~~~~-----------~~~~~~~Lae~L~~~~p-~~~----~v~~~nS 164 (465)
T 2yky_A 101 AYVNFLGEYTAGLFGHSHPVIRAAVERALAVGLNLST-----------QTENEALFAEAVCDRFP-SID----LVRFTNS 164 (465)
Confidence 45666655542 378899999887755211111 12333345577777774 232 2666665
Q ss_pred hH-HHHHHHHHh--cCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhh--cCC
Q 023191 122 SP-SNFQVYTAL--LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATL--FRP 196 (286)
Q Consensus 122 ~~-a~~~~l~a~--~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~--~~t 196 (286)
++ |+..+++.. ...+++|++++..|.++..... . +....|.....++++. .|+++|++++++ .++
T Consensus 165 GseA~~~Aik~ar~~tgr~~ii~~~~~yHG~~~~~~---s-g~~~~g~~~~~~~~~~------~d~~~l~~~l~~~~~~~ 234 (465)
T 2yky_A 165 GTEANLMALATATAITGRKTVLAFDGGYHGGLLNFA---S-GHAPTNAPYHVVLGVY------NDVEGTADLLKRHGHDC 234 (465)
Confidence 55 888777654 3466999999977765432111 0 0001121001122221 378899998873 378
Q ss_pred cEEEEcC--CCCCCccC----HHHHHHHHHhcCCEEEEeccccccccccCCCCCC-CC-cceEEEeCCCCCCCCC-CceE
Q 023191 197 KLIVAGA--SAYARLYD----YERIRKVCNKQKAIMLADMAHISGLVAAGVIPSP-FE-YADVVTTTTHKSLRGP-RGAM 267 (286)
Q Consensus 197 k~v~i~~--~n~g~~~~----l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~-~~-~~D~v~~s~~K~l~gp-~gG~ 267 (286)
++|++.+ +|+|...+ +++|.++|++||+++|+|++|. + ......... +. ..|++ +++|++++. +.|+
T Consensus 235 aavi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~-~-r~g~~~a~~~~gv~pDi~--t~sK~lg~G~piG~ 310 (465)
T 2yky_A 235 AAILVEPMLGAGGCVPAERAFLDLLRAEASRCGALLIFDEVMT-S-RLSGGGAQEMLGISADLT--TLGKYIGGGMSFGA 310 (465)
Confidence 8988863 34665554 9999999999999999999988 4 211110000 01 25654 678999763 3499
Q ss_pred EEEecchhhhhcc
Q 023191 268 IFFRKGVKEINKQ 280 (286)
Q Consensus 268 l~~~~~~~~~~~~ 280 (286)
+++++++.+....
T Consensus 311 v~~~~~i~~~l~~ 323 (465)
T 2yky_A 311 FGGRRDLMERFDP 323 (465)
Confidence 9999988876654
No 233
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=99.02 E-value=3.3e-09 Score=97.22 Aligned_cols=192 Identities=14% Similarity=0.092 Sum_probs=112.5
Q ss_pred CHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-HHHHHHHHh--cCC
Q 023191 59 SVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTAL--LKP 135 (286)
Q Consensus 59 ~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l~a~--~~~ 135 (286)
.|+|++|+.+.+......+ ..+....+ +.+.+++.+.- .+ .|.++++.+ |+..+++.. ...
T Consensus 105 hp~v~~Av~~q~~~~~~~~-------~~~~~~~~----lae~l~~~~p~-~~----~v~f~~SGsEA~e~AiklAr~~tg 168 (454)
T 4ao9_A 105 APEIRDAVIEAMQGGINLT-------GHNLLEGR----LARLICERFPQ-IE----QLRFTNSGTEANLMALTAALHFTG 168 (454)
T ss_dssp CHHHHHHHHHHHHTCSCCC-------SEESSHHH----HHHHHHHHSTT-CS----EEEEESSHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHhcCCCcc-------CCcHHHHH----HHHHHHHhCCC-CC----EEEEeCchHHHHHHHHHHHHhccc
Confidence 6999999988876532111 11122223 44667777642 22 377765555 888766654 234
Q ss_pred CCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhc--CCcEEEEc--CCCCCCccC
Q 023191 136 HDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF--RPKLIVAG--ASAYARLYD 211 (286)
Q Consensus 136 Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~--~tk~v~i~--~~n~g~~~~ 211 (286)
.++|+.+...|.+...... . .............+ +. -|++.+++.+.++ ++.+|++. ..+.|.+.|
T Consensus 169 r~~ii~~~~~yHG~t~~~~-~-~~~~~~~~~~~~~~--p~------nd~~~l~~~l~~~~~~iAavIvEPv~g~~G~~~p 238 (454)
T 4ao9_A 169 RRKIVVFSGGYHGGVLGFG-A-RPSPTTVPFDFLVL--PY------NDAQTARAQIERHGPEIAVVLVEPMQGASGCIPG 238 (454)
T ss_dssp CCEEEEETTCBCSTTCBBS-S-SBCTTSCCSEEEEE--CT------TCHHHHHHHHHHTGGGEEEEEECSEESTTTCEEC
T ss_pred CCeEEEEeCCcCCcccccc-c-cccCccCCCCcccC--CC------chHHHHHHHHhhcCCceEEEEeccccCCCCccCC
Confidence 5778888766665432111 0 00000011112222 22 2789999988753 46778876 344555544
Q ss_pred ----HHHHHHHHHhcCCEEEEeccccccccccCCCCCCCC-cceEEEeCCCCCCCCCCc-eEEEEecchhhhhc
Q 023191 212 ----YERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFE-YADVVTTTTHKSLRGPRG-AMIFFRKGVKEINK 279 (286)
Q Consensus 212 ----l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~-~~D~v~~s~~K~l~gp~g-G~l~~~~~~~~~~~ 279 (286)
+++|.++|++||+++|+|++|. |-.........+. ..|+++ +.|.++|... |++.+++++.+...
T Consensus 239 ~~~fL~~lr~lc~~~g~lLI~DEV~t-GR~G~~~a~e~~gv~PDi~t--~gK~lggG~Piga~~~~~ei~~~~~ 309 (454)
T 4ao9_A 239 QPDFLQALRESATQVGALLVFDEVMT-SRLAPHGLANKLGIRSDLTT--LGKYIGGGMSFGAFGGRADVMALFD 309 (454)
T ss_dssp CHHHHHHHHHHHHHHTCEEEEECTTG-GGGSTTCHHHHHTCCCSEEE--EEGGGGTTSSCEEEEECHHHHGGGC
T ss_pred chhhHHHHHHHHhhcCCEEEEECCCc-CCCccccchhccCCCCcEEE--eccccCCCCcceeeeeHHHHHHHHh
Confidence 9999999999999999999986 4222111000000 158775 4587766544 88999998887765
No 234
>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*
Probab=98.66 E-value=1.4e-06 Score=79.92 Aligned_cols=209 Identities=11% Similarity=0.017 Sum_probs=110.2
Q ss_pred CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeC-CChHHHHHHHHHh--cC
Q 023191 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSL-SGSPSNFQVYTAL--LK 134 (286)
Q Consensus 58 ~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~-sG~~a~~~~l~a~--~~ 134 (286)
-.|++.+|+.+.+.... .. . .++...+. ..++.+++.++...+.- ..++++ ||+.|+..+++.. ..
T Consensus 81 ~~p~v~~Ai~~q~~~~~-~~--~-~~~~~~~~----~~~lae~L~~~~p~~~~---~~v~f~~sGsEA~e~AlklAr~~t 149 (456)
T 4atq_A 81 SDPAVVAAVQEAAAHFT-HT--C-FMVTPYEG----YVAVTEQLNRLTPGDHA---KRTVLFNSGAEAVENAVKVARLAT 149 (456)
T ss_dssp TCHHHHHHHHHHHHHCS-CC--T-TTTSCCHH----HHHHHHHHHHHSSCSSC---EEEEEESSHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhhcc-Cc--c-cCccCcHH----HHHHHHHHHHhCCCCCC---cEEEEeCChHHHHHHHHHHHhhhh
Confidence 36899999987665421 11 0 01111122 22355777777754321 235554 5555887666533 34
Q ss_pred CCCeEEeccCCCCcccCcccc------ccccccccceeeeEEEeccc--CCCC-CCCCHHHHHHHh-------hhcCCcE
Q 023191 135 PHDRIMALDLPHGGHLSHGYQ------TDTKKISAVSIFFETMPYRL--NEST-GYIDYDQLEKSA-------TLFRPKL 198 (286)
Q Consensus 135 ~Gd~Vl~~~~~~~~~~~~~~~------~~~~~~~~~g~~~~~v~~~~--~~~~-~~~d~e~l~~~i-------~~~~tk~ 198 (286)
...+|+.....|.+...-... .++....-....+..+|++. .... ...+.+.+++.+ ...++.+
T Consensus 150 ~r~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~iAA 229 (456)
T 4atq_A 150 GRDAVVAFDHAYHGRTNLTMALTAKAMPYKTNFGPFAPEVYRMPMSYPFREENPEITGAEAAKRAITMIEKQIGGDQVAA 229 (456)
T ss_dssp CCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCGGGCSSTTCCHHHHHHHHHHHHHHHTCGGGEEE
T ss_pred cCCeEEEEecccCCccccccccccCccccccCCCCccccceecccccccccCCCcccHHHHHHHHHHHHHHhhcCCceEE
Confidence 567888888777665310000 01111111111133344321 1111 122333333332 2335778
Q ss_pred EEEcCC--CCCCc----cCHHHHHHHHHhcCCEEEEeccccc-cccccCC--CCCCCCcceEEEeCCCCCCCCCCc-eEE
Q 023191 199 IVAGAS--AYARL----YDYERIRKVCNKQKAIMLADMAHIS-GLVAAGV--IPSPFEYADVVTTTTHKSLRGPRG-AMI 268 (286)
Q Consensus 199 v~i~~~--n~g~~----~~l~~I~~ia~~~~~~vivD~a~~~-g~~~~~~--~~~~~~~~D~v~~s~~K~l~gp~g-G~l 268 (286)
|++.|- +-|.. .-+++|.++|++||+++|.|+++.. |-..... ....+ ..|+++++ |.++|... |.+
T Consensus 230 vivEPiqg~gG~~~p~~~fl~~lr~lc~~~gillI~DEV~tG~GRtG~~~a~e~~gv-~PDivt~g--K~lggg~P~~av 306 (456)
T 4atq_A 230 IIIEPIQGEGGFIVPAEGFLPALSEWAKEKGIVFIADEVQSGFCRTGEWFAVDHEGV-VPDIITMA--KGIAGGLPLSAI 306 (456)
T ss_dssp EEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTC-CCSEEEEC--GGGGTTSSCEEE
T ss_pred EEeccccCCCCccccchhhhHHHHHHHhhcCCceEecccccccCCccccccccccCC-CCchhhhh--hcccCcCCceee
Confidence 888632 23422 2399999999999999999999863 2221111 11111 27988775 87766544 888
Q ss_pred EEecchhhhhcc
Q 023191 269 FFRKGVKEINKQ 280 (286)
Q Consensus 269 ~~~~~~~~~~~~ 280 (286)
++++++.+..+.
T Consensus 307 ~~~~~i~~~~~~ 318 (456)
T 4atq_A 307 TGRADLLDAVHP 318 (456)
T ss_dssp EEEHHHHTTSCT
T ss_pred EecHHHHhcccc
Confidence 999887766553
No 235
>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A
Probab=97.96 E-value=7.8e-05 Score=68.61 Aligned_cols=205 Identities=12% Similarity=0.097 Sum_probs=105.5
Q ss_pred CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-HHHHHHHHhc---
Q 023191 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALL--- 133 (286)
Q Consensus 58 ~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l~a~~--- 133 (286)
-.|++.+|+.+.+..... + ..+++. .. +.+.++.+++.+....+.+ .|.++++.+ |+..+++...
T Consensus 84 ~~p~v~~Ai~~q~~~l~~--~--~~~~~~-~~--~~~~~lAe~L~~~~p~~~~----~v~f~~sGsEA~e~AiKlAr~~~ 152 (473)
T 4e3q_A 84 DHKGLIDAAKAQYERFPG--Y--HAFFGR-MS--DQTVMLSEKLVEVSPFDSG----RVFYTNSGSEANDTMVKMLWFLH 152 (473)
T ss_dssp CCHHHHHHHHHHHHHCCC--C--CCCTTE-EE--HHHHHHHHHHHHHSSCSSC----EEEEESSHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhccc--c--cccccc-cC--HHHHHHHHHHHhhCCCCcc----EEEEeCchHHHHHHHHHHHHHHH
Confidence 379999999887755210 0 011111 11 2222366888888765543 377766555 8877665431
Q ss_pred ----CCC-CeEEeccCCCCcccCccc----ccccc--ccccceeeeEEEeccc--C-CCCCCC-------CHHHHHHHhh
Q 023191 134 ----KPH-DRIMALDLPHGGHLSHGY----QTDTK--KISAVSIFFETMPYRL--N-ESTGYI-------DYDQLEKSAT 192 (286)
Q Consensus 134 ----~~G-d~Vl~~~~~~~~~~~~~~----~~~~~--~~~~~g~~~~~v~~~~--~-~~~~~~-------d~e~l~~~i~ 192 (286)
.++ .+|+.....|.+...-.. ..+.. ..-+.+ ...++.+. . ...... ..+++++.+.
T Consensus 153 ~~~g~~~r~~ii~~~~~yHG~t~~a~s~tg~~~~~~~~~~~~~--~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~i~ 230 (473)
T 4e3q_A 153 AAEGKPQKRKILTRWNAYHGVTAVSASMTGKPYNSVFGLPLPG--FVHLTCPHYWRYGEEGETEEQFVARLARELEETIQ 230 (473)
T ss_dssp HHTTCTTCCEEEEETTCCCCSSHHHHHHSCCGGGGGGTCSCTT--EEEECCCCHHHHSCTTCCHHHHHHHHHHHHHHHHH
T ss_pred HhcCCCCcceEEEeeceECCCccccccccccccccccCCCCCc--ccccCCCcccccccccchhhHHHHHHHHHHHHHHH
Confidence 233 467777766665421000 00000 001111 11222110 0 011111 1244555554
Q ss_pred h---cCCcEEEEcCCC--CCCc----cCHHHHHHHHHhcCCEEEEeccccc-cccccCC--CCCCCCcceEEEeCCCCCC
Q 023191 193 L---FRPKLIVAGASA--YARL----YDYERIRKVCNKQKAIMLADMAHIS-GLVAAGV--IPSPFEYADVVTTTTHKSL 260 (286)
Q Consensus 193 ~---~~tk~v~i~~~n--~g~~----~~l~~I~~ia~~~~~~vivD~a~~~-g~~~~~~--~~~~~~~~D~v~~s~~K~l 260 (286)
. .++.+|++.|-. -|.+ .-+++|.++|++||+++|.||++.. |-..... ....+ ..|++++ .|.+
T Consensus 231 ~~~~~~iAavi~EPiqg~gG~~~p~~~fl~~lr~lc~~~gilLI~DEV~tGfGRtG~~fa~e~~gv-~PDi~t~--~K~l 307 (473)
T 4e3q_A 231 REGADTIAGFFAEPVMGAGGVIPPAKGYFQAILPILRKYDIPVISDEVICGFGRTGNTWGCVTYDF-TPDAIIS--SKNL 307 (473)
T ss_dssp HHCGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCCEEEECTTTSSSTTSSSCHHHHTTC-CCSEEEE--CGGG
T ss_pred hhCCCceEEEEeCCccCCCCceeCCHHHHHHHHHHhcccceEEeccCccccCCcccchhHHHhcCC-CCChHHh--cccc
Confidence 3 245677776322 3322 2399999999999999999999762 2111100 00110 2688765 5888
Q ss_pred CCC--CceEEEEecchhhhh
Q 023191 261 RGP--RGAMIFFRKGVKEIN 278 (286)
Q Consensus 261 ~gp--~gG~l~~~~~~~~~~ 278 (286)
+|. +-|++++++++.+..
T Consensus 308 ~gG~~Pl~av~~~~~i~~~~ 327 (473)
T 4e3q_A 308 TAGFFPMGAVILGPELSKRL 327 (473)
T ss_dssp GTTSSCCEEEEECHHHHHHH
T ss_pred cCCCCCcccccccHHHHHHh
Confidence 654 348888988876544
No 236
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=97.91 E-value=5.5e-05 Score=74.32 Aligned_cols=94 Identities=12% Similarity=-0.001 Sum_probs=60.1
Q ss_pred HHHHHHhhh-------cCCcEEEEcCC--CCC-CccC----HHHHHHHHHhcCCEEEEecccc-ccccccCCC--CCCCC
Q 023191 185 DQLEKSATL-------FRPKLIVAGAS--AYA-RLYD----YERIRKVCNKQKAIMLADMAHI-SGLVAAGVI--PSPFE 247 (286)
Q Consensus 185 e~l~~~i~~-------~~tk~v~i~~~--n~g-~~~~----l~~I~~ia~~~~~~vivD~a~~-~g~~~~~~~--~~~~~ 247 (286)
++|++.+.+ .++.+|++.|. +.| ...+ +++|.++|++||+++|+|++|. +|-...... ..++
T Consensus 577 ~~le~~l~~~~~~~~~~~iaavi~Epvvqg~gG~~~~~~~~L~~l~~lc~~~gilLI~DEV~tGfGRtG~~fa~e~~gv- 655 (831)
T 4a0g_A 577 AYLSKHLQEHSGVRQSAHVGALIIEPVIHGAGGMHMVDPLFQRVLVNECRNRKIPVIFDEVFTGFWRLGVETTTELLGC- 655 (831)
T ss_dssp HHHHHHC---------CEEEEEEECCSEETTTTSEEECHHHHHHHHHHHHHTTCCEEEECTTTTTTTTSBSSTHHHHSS-
T ss_pred HHHHHHHHhhhhhcCCCcEEEEEEecccccCCCCccCCHHHHHHHHHHHHHcCCeEEEEcCccccccCCCchhhHhcCC-
Confidence 567777652 24677877753 443 3322 8999999999999999999975 222211110 0010
Q ss_pred cceEEEeCCCCCCCCC--CceEEEEecchhhhhccC
Q 023191 248 YADVVTTTTHKSLRGP--RGAMIFFRKGVKEINKQG 281 (286)
Q Consensus 248 ~~D~v~~s~~K~l~gp--~gG~l~~~~~~~~~~~~~ 281 (286)
..|++ ++.|.++|. +-|++++++++.+....+
T Consensus 656 ~PDii--tlsK~L~gG~~Plgav~~~~~i~~~~~~~ 689 (831)
T 4a0g_A 656 KPDIA--CFAKLLTGGMVPLAVTLATDAVFDSFSGD 689 (831)
T ss_dssp CCSEE--EECGGGGTTSSCCEEEEECHHHHHTTCSS
T ss_pred CCcEE--EEecccccCccCcEEEEECHHHHHHHhcc
Confidence 25776 477999774 339999999988777643
No 237
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=56.55 E-value=29 Score=23.95 Aligned_cols=52 Identities=12% Similarity=-0.116 Sum_probs=34.3
Q ss_pred CCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCcc----CHHHHHHHHHhcCCE-EEEecc
Q 023191 180 GYIDYDQLEKSATLFRPKLIVAG-ASA-YARLY----DYERIRKVCNKQKAI-MLADMA 231 (286)
Q Consensus 180 ~~~d~e~l~~~i~~~~tk~v~i~-~~n-~g~~~----~l~~I~~ia~~~~~~-vivD~a 231 (286)
...+++.|.+.+.+.++..|++. |-| +|... -.++.++..++.++. .++||-
T Consensus 36 ~~~~~~~l~~li~e~~v~~iVvGlP~~mdGt~~~~~~~~~~f~~~L~~~~lpV~~~DER 94 (98)
T 1iv0_A 36 LEEDVEALLDFVRREGLGKLVVGLPLRTDLKESAQAGKVLPLVEALRARGVEVELWDER 94 (98)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEEECCCCCCSSSCCCSSTTHHHHHHHHHTTCEEEEECCS
T ss_pred cHHHHHHHHHHHHHcCCCEEEEeeccCCCCCcCHHHHHHHHHHHHHhcCCCCEEEECCC
Confidence 45678999999998899999998 666 55332 244444333333664 678875
No 238
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=54.43 E-value=16 Score=27.65 Aligned_cols=50 Identities=12% Similarity=-0.052 Sum_probs=38.3
Q ss_pred CCHHHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcC---CEEEEecc
Q 023191 182 IDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQK---AIMLADMA 231 (286)
Q Consensus 182 ~d~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~---~~vivD~a 231 (286)
..++++.+.+.+.++.+|.++..++.....++++++.+++.+ +.|++=++
T Consensus 56 ~p~e~lv~aa~~~~~diV~lS~~~~~~~~~~~~~i~~L~~~g~~~i~v~vGG~ 108 (161)
T 2yxb_A 56 QTPEQVAMAAVQEDVDVIGVSILNGAHLHLMKRLMAKLRELGADDIPVVLGGT 108 (161)
T ss_dssp CCHHHHHHHHHHTTCSEEEEEESSSCHHHHHHHHHHHHHHTTCTTSCEEEEEC
T ss_pred CCHHHHHHHHHhcCCCEEEEEeechhhHHHHHHHHHHHHhcCCCCCEEEEeCC
Confidence 578888888887799999998666666667888888887754 66776554
No 239
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ...
Probab=53.76 E-value=6.7 Score=35.19 Aligned_cols=27 Identities=11% Similarity=0.220 Sum_probs=24.1
Q ss_pred CCCCccCHHHHHHHHHhcCCEEEEecc
Q 023191 205 AYARLYDYERIRKVCNKQKAIMLADMA 231 (286)
Q Consensus 205 n~g~~~~l~~I~~ia~~~~~~vivD~a 231 (286)
.+|+..+++++++-||++|+.||.|.+
T Consensus 72 ~~Gt~~df~~lv~~aH~~Gi~VilD~V 98 (496)
T 4gqr_A 72 RSGNEDEFRNMVTRCNNVGVRIYVDAV 98 (496)
T ss_dssp TTBCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCHHHHHHHHHHHHHCCCEEEEEEc
Confidence 356677899999999999999999998
No 240
>1nu0_A Hypothetical protein YQGF; structural genomics, structure 2 function project, S2F, unknown function; 1.60A {Escherichia coli} SCOP: c.55.3.8 PDB: 1nmn_A 1ovq_A
Probab=52.19 E-value=26 Score=25.94 Aligned_cols=53 Identities=21% Similarity=0.277 Sum_probs=36.5
Q ss_pred CCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccCHH-HHHHH----HHhcCC-EEEEeccc
Q 023191 180 GYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYE-RIRKV----CNKQKA-IMLADMAH 232 (286)
Q Consensus 180 ~~~d~e~l~~~i~~~~tk~v~i~-~~n-~g~~~~l~-~I~~i----a~~~~~-~vivD~a~ 232 (286)
+..+++.|.+.+.+.++..|+++ |-| .|+..+.. .+.++ .++.++ +.++||-.
T Consensus 38 ~~~~~~~l~~li~e~~v~~iVvGlP~~mdGt~~~~~~~~~~f~~~L~~~~~lpV~~~DERl 98 (138)
T 1nu0_A 38 GTPDWNIIERLLKEWQPDEIIVGLPLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERL 98 (138)
T ss_dssp TEECHHHHHHHHHHHCCSEEEEEEEECTTSCBCHHHHHHHHHHHHHHHHHCCCEEEEEEEC
T ss_pred cchHHHHHHHHHHHcCCCEEEEecccCCCcCcCHHHHHHHHHHHHHHHHhCCCEEEEcCCc
Confidence 45689999999998899999998 666 66554422 22233 334565 58899873
No 241
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=51.50 E-value=28 Score=27.44 Aligned_cols=51 Identities=8% Similarity=0.108 Sum_probs=39.5
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcC----CEEEEecc
Q 023191 181 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQK----AIMLADMA 231 (286)
Q Consensus 181 ~~d~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~----~~vivD~a 231 (286)
....+++.+.+.+.++.+|.++..++.....++++.+.+++.+ +.|++=++
T Consensus 125 ~vp~~~l~~~~~~~~~d~v~lS~~~~~~~~~~~~~i~~l~~~~~~~~~~v~vGG~ 179 (210)
T 1y80_A 125 DIEPGKFVEAVKKYQPDIVGMSALLTTTMMNMKSTIDALIAAGLRDRVKVIVGGA 179 (210)
T ss_dssp SBCHHHHHHHHHHHCCSEEEEECCSGGGTHHHHHHHHHHHHTTCGGGCEEEEEST
T ss_pred CCCHHHHHHHHHHcCCCEEEEeccccccHHHHHHHHHHHHhcCCCCCCeEEEECC
Confidence 4678999888887799999998666555666888888888754 78887665
No 242
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=51.41 E-value=11 Score=32.70 Aligned_cols=51 Identities=6% Similarity=-0.160 Sum_probs=41.5
Q ss_pred CCCCHHHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEEEecc
Q 023191 180 GYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMA 231 (286)
Q Consensus 180 ~~~d~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~vivD~a 231 (286)
..+|+..+.+.+.. ....+-++|.|.|....++++.+.|+++|+.+-+---
T Consensus 91 iHf~~~lal~a~e~-G~dklRINPGNig~~~~~~~vv~~ak~~~~piRIGvN 141 (366)
T 3noy_A 91 IHFAPSYAFLSMEK-GVHGIRINPGNIGKEEIVREIVEEAKRRGVAVRIGVN 141 (366)
T ss_dssp CCSCHHHHHHHHHT-TCSEEEECHHHHSCHHHHHHHHHHHHHHTCEEEEEEE
T ss_pred CCCCHHHHHHHHHh-CCCeEEECCcccCchhHHHHHHHHHHHcCCCEEEecC
Confidence 55788777777765 5777889999998777799999999999999887533
No 243
>3bzy_B ESCU; auto cleavage protein, flagella, intein, T3SS, membrane, membrane protein, protein transport; 1.20A {Escherichia coli} SCOP: d.367.1.1 PDB: 3c00_B 3bzl_C 3bzo_B 3bzv_B 3c03_C 3bzz_B 3bzx_B
Probab=50.69 E-value=8.4 Score=25.92 Aligned_cols=20 Identities=15% Similarity=0.164 Sum_probs=18.0
Q ss_pred HHHHHHHHHhcCCEEEEecc
Q 023191 212 YERIRKVCNKQKAIMLADMA 231 (286)
Q Consensus 212 l~~I~~ia~~~~~~vivD~a 231 (286)
-++|.++|++||++++.|-.
T Consensus 29 A~~I~~~A~e~~VPi~e~~~ 48 (83)
T 3bzy_B 29 ALQIIKLAELYDIPVIEDIP 48 (83)
T ss_dssp HHHHHHHHHHTTCCEEECHH
T ss_pred HHHHHHHHHHcCCCEEeCHH
Confidence 56899999999999999975
No 244
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=49.58 E-value=46 Score=26.53 Aligned_cols=45 Identities=4% Similarity=0.022 Sum_probs=34.8
Q ss_pred HHHHHHHhhhcCCcEEEEc-CCCCCCccCHHHHHHHHHhcCCEEEEecccc
Q 023191 184 YDQLEKSATLFRPKLIVAG-ASAYARLYDYERIRKVCNKQKAIMLADMAHI 233 (286)
Q Consensus 184 ~e~l~~~i~~~~tk~v~i~-~~n~g~~~~l~~I~~ia~~~~~~vivD~a~~ 233 (286)
++++++.+++++...++++ |+. ..+++++.|.+.|+--|+..+..
T Consensus 137 ~~dL~~~v~~~~Id~vIIAvPs~-----~aq~v~d~lv~~GIk~I~nFap~ 182 (212)
T 3keo_A 137 ISTINDHLIDSDIETAILTVPST-----EAQEVADILVKAGIKGILSFSPV 182 (212)
T ss_dssp GGGHHHHC-CCSCCEEEECSCGG-----GHHHHHHHHHHHTCCEEEECSSS
T ss_pred HHHHHHHHHHcCCCEEEEecCch-----hHHHHHHHHHHcCCCEEEEcCCc
Confidence 4567888887788899998 443 35789999999999999988753
No 245
>4e84_A D-beta-D-heptose 7-phosphate kinase; LPS-heptose biosynthesis, beta-clAsp dimerization region, PF carbohydrate kinase, phosphorylation; HET: MSE ANP M7B GMZ; 2.60A {Burkholderia cenocepacia} PDB: 4e8w_A* 4e8y_A* 4e8z_A*
Probab=48.04 E-value=74 Score=27.17 Aligned_cols=37 Identities=11% Similarity=0.102 Sum_probs=28.1
Q ss_pred CCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEEEecc
Q 023191 195 RPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMA 231 (286)
Q Consensus 195 ~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~vivD~a 231 (286)
+.++++++.-..+....+.++.+.|+++++.++.|..
T Consensus 186 ~~~~v~~~g~~~~~~~~~~~~~~~a~~~g~~v~~D~~ 222 (352)
T 4e84_A 186 QHDVVLMSDYAKGGLTHVTTMIEKARAAGKAVLVDPK 222 (352)
T ss_dssp GCSEEEEECCSSSSCSSHHHHHHHHHHTTCEEEEECC
T ss_pred cCCEEEEeCCCCCCHHHHHHHHHHHHhcCCEEEEECC
Confidence 4788888622223444589999999999999999975
No 246
>2lbw_A H/ACA ribonucleoprotein complex subunit 2; L7AE, snoRNP, scaRNP, RNA binding protein; NMR {Saccharomyces cerevisiae} PDB: 2lbx_A
Probab=47.51 E-value=41 Score=24.09 Aligned_cols=52 Identities=12% Similarity=0.052 Sum_probs=33.4
Q ss_pred HHHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEE-EEeccccccc
Q 023191 184 YDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIM-LADMAHISGL 236 (286)
Q Consensus 184 ~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~v-ivD~a~~~g~ 236 (286)
..+..++++..+.++|++. ++.....-...|-.+|+++++++ +++.-.-+|.
T Consensus 25 ~~~v~kai~~gkakLViiA-~D~~~~~~~~~l~~lc~~~~VP~~~v~sk~eLG~ 77 (121)
T 2lbw_A 25 VKEVVKALRKGEKGLVVIA-GDIWPADVISHIPVLCEDHSVPYIFIPSKQDLGA 77 (121)
T ss_dssp HHHHHHHHHHSCCCEEEEC-TTCSCTTHHHHHHHHHHHTCCCEEECCCHHHHHH
T ss_pred HHHHHHHHHcCCceEEEEe-CCCCHHHHHHHHHHHHHhcCCcEEEECCHHHHHH
Confidence 4566777777688999884 22222112667889999999976 4454333454
No 247
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=45.95 E-value=30 Score=25.94 Aligned_cols=54 Identities=13% Similarity=0.082 Sum_probs=37.2
Q ss_pred CCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccC-H---HHHH-HHHHhcCC-EEEEecccc
Q 023191 180 GYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYD-Y---ERIR-KVCNKQKA-IMLADMAHI 233 (286)
Q Consensus 180 ~~~d~e~l~~~i~~~~tk~v~i~-~~n-~g~~~~-l---~~I~-~ia~~~~~-~vivD~a~~ 233 (286)
...+++.|.+++.++++..|++. |-| +|+..+ . +.++ .++++.++ ++++||..+
T Consensus 40 ~~~~~~~l~~li~~~~~~~ivVGlP~~~nGt~~~~~~~ar~f~~~L~~~~~lpV~~vDEr~T 101 (150)
T 1vhx_A 40 GDYGLSRLSELIKDYTIDKIVLGFPKNMNGTVGPRGEASQTFAKVLETTYNVPVVLWDERLT 101 (150)
T ss_dssp TBCCHHHHHHHHTTSEEEEEEEECCCCBTTBCCHHHHHHHHHHHHHHHHHCSCEEEECCSSC
T ss_pred hHHHHHHHHHHHHHcCCCEEEEeeeecCCcchhHHHHHHHHHHHHHHHhhCCCEEEecCCCC
Confidence 45689999999999889999997 655 564332 2 3333 44455676 577899854
No 248
>1ht6_A AMY1, alpha-amylase isozyme 1; barley, beta-alpha-barrel, hydrolase; 1.50A {Hordeum vulgare} SCOP: b.71.1.1 c.1.8.1 PDB: 1p6w_A* 1rpk_A* 3bsg_A 2qpu_A* 1rp8_A* 1rp9_A* 2qps_A 3bsh_A* 1ava_A 1amy_A 1bg9_A*
Probab=45.03 E-value=12 Score=33.07 Aligned_cols=28 Identities=14% Similarity=0.229 Sum_probs=24.0
Q ss_pred CCCCCccCHHHHHHHHHhcCCEEEEecc
Q 023191 204 SAYARLYDYERIRKVCNKQKAIMLADMA 231 (286)
Q Consensus 204 ~n~g~~~~l~~I~~ia~~~~~~vivD~a 231 (286)
+.+|+..+++++++-||++|+-||.|.+
T Consensus 63 ~~~Gt~~d~~~lv~~~h~~Gi~VilD~V 90 (405)
T 1ht6_A 63 SKYGNAAELKSLIGALHGKGVQAIADIV 90 (405)
T ss_dssp CTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred ccCCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 4456667799999999999999999987
No 249
>2ab1_A Hypothetical protein; HS.95870, DUF498, structural genomics, protein structure INI PSI, center for eukaryotic structural genomics, CESG; 2.59A {Homo sapiens} SCOP: c.103.1.1 PDB: 2q4q_A
Probab=44.48 E-value=62 Score=23.26 Aligned_cols=50 Identities=8% Similarity=-0.057 Sum_probs=35.8
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEEEecc
Q 023191 181 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMA 231 (286)
Q Consensus 181 ~~d~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~vivD~a 231 (286)
.++.++++..+.+ ++.+|+++.-.......-.++.+..+++|+-+-+-..
T Consensus 48 ~l~~~~l~~ll~~-~~evliiGtG~~~~~~~~~~~~~~l~~~gI~ve~m~T 97 (122)
T 2ab1_A 48 GVQPADVKEVVEK-GVQTLVIGRGMSEALKVPSSTVEYLKKHGIDVRVLQT 97 (122)
T ss_dssp CCCHHHHHHHHTT-CCSEEEEEECSSCCSCCCHHHHHHHHHTTCEEEEECH
T ss_pred HCCHHHHHHHhhC-CCCEEEECCCCCCccCCCHHHHHHHHHcCCEEEEeCH
Confidence 5888999999887 8999999733333332456778888999986655443
No 250
>1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A*
Probab=43.86 E-value=13 Score=33.20 Aligned_cols=26 Identities=8% Similarity=0.276 Sum_probs=22.5
Q ss_pred CCCccCHHHHHHHHHhcCCEEEEecc
Q 023191 206 YARLYDYERIRKVCNKQKAIMLADMA 231 (286)
Q Consensus 206 ~g~~~~l~~I~~ia~~~~~~vivD~a 231 (286)
+|+..+++++++-||++|+-||.|.+
T Consensus 66 ~Gt~~df~~lv~~aH~~Gi~VilD~V 91 (441)
T 1lwj_A 66 YGSEREFKEMIEAFHDSGIKVVLDLP 91 (441)
T ss_dssp TCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cCCHHHHHHHHHHHHHCCCEEEEEeC
Confidence 45666789999999999999999988
No 251
>3bh4_A Alpha-amylase; calcium, carbohydrate metabolism, glycosidase, hydrolase, metal-binding, secreted; 1.40A {Bacillus amyloliquefaciens} PDB: 1e43_A 1e3z_A* 1e40_A* 1e3x_A 1vjs_A 1ob0_A 1bli_A 1bpl_B 1bpl_A
Probab=43.69 E-value=13 Score=33.61 Aligned_cols=28 Identities=7% Similarity=0.154 Sum_probs=24.8
Q ss_pred CCCCCccCHHHHHHHHHhcCCEEEEecc
Q 023191 204 SAYARLYDYERIRKVCNKQKAIMLADMA 231 (286)
Q Consensus 204 ~n~g~~~~l~~I~~ia~~~~~~vivD~a 231 (286)
+.+|+..+++++++-||++|+-||.|.+
T Consensus 73 ~~~Gt~~df~~lv~~aH~~Gi~VilD~V 100 (483)
T 3bh4_A 73 TKYGTKSELQDAIGSLHSRNVQVYGDVV 100 (483)
T ss_dssp CSSCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEEEc
Confidence 3467788899999999999999999987
No 252
>1ud2_A Amylase, alpha-amylase; calcium-free, alkaline, hydrolase; 2.13A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1ud4_A 1ud5_A 1ud6_A 1ud8_A 1ud3_A
Probab=43.24 E-value=13 Score=33.50 Aligned_cols=27 Identities=15% Similarity=0.160 Sum_probs=24.1
Q ss_pred CCCCccCHHHHHHHHHhcCCEEEEecc
Q 023191 205 AYARLYDYERIRKVCNKQKAIMLADMA 231 (286)
Q Consensus 205 n~g~~~~l~~I~~ia~~~~~~vivD~a 231 (286)
.+|+..+++++++-||++|+-||.|.+
T Consensus 76 ~~Gt~~df~~lv~~aH~~Gi~VilD~V 102 (480)
T 1ud2_A 76 KYGTKAQLERAIGSLKSNDINVYGDVV 102 (480)
T ss_dssp SSCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCHHHHHHHHHHHHHCCCEEEEEEc
Confidence 366778899999999999999999987
No 253
>3j21_Z 50S ribosomal protein L30E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=43.14 E-value=39 Score=23.15 Aligned_cols=43 Identities=12% Similarity=-0.036 Sum_probs=30.3
Q ss_pred HHHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEEE
Q 023191 184 YDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLA 228 (286)
Q Consensus 184 ~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~viv 228 (286)
.++..+.++..+.++|++.. +.+ ..-.++|..+|++++++++.
T Consensus 20 ~~~v~kai~~gka~lViiA~-D~~-~~~~~~i~~~c~~~~ip~~~ 62 (99)
T 3j21_Z 20 SNETIRLAKTGGAKLIIVAK-NAP-KEIKDDIYYYAKLSDIPVYE 62 (99)
T ss_dssp HHHHHHHHHHTCCSEEEEEC-CCC-HHHHHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHcCCccEEEEeC-CCC-HHHHHHHHHHHHHcCCCEEE
Confidence 46677788776889988852 222 23367888899999998643
No 254
>3t7y_A YOP proteins translocation protein U; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta; 2.10A {Chlamydia trachomatis} SCOP: d.367.1.0
Probab=43.10 E-value=12 Score=26.00 Aligned_cols=20 Identities=15% Similarity=0.187 Sum_probs=18.0
Q ss_pred HHHHHHHHHhcCCEEEEecc
Q 023191 212 YERIRKVCNKQKAIMLADMA 231 (286)
Q Consensus 212 l~~I~~ia~~~~~~vivD~a 231 (286)
-++|.++|++||++++.|-.
T Consensus 44 A~~I~~~A~e~gVPi~e~~~ 63 (97)
T 3t7y_A 44 AKRIIAEAEKYGVPIMRNVP 63 (97)
T ss_dssp HHHHHHHHHHHTCCEEECHH
T ss_pred HHHHHHHHHHcCCeEEECHH
Confidence 56899999999999999976
No 255
>2vt1_B Surface presentation of antigens protein SPAS; specificity switch, virulence, transmembrane, inner membrane, FLHB, YSCU, T3SS, plasmid; 2.00A {Shigella flexneri} SCOP: d.367.1.1
Probab=43.07 E-value=13 Score=25.60 Aligned_cols=20 Identities=20% Similarity=0.174 Sum_probs=17.9
Q ss_pred HHHHHHHHHhcCCEEEEecc
Q 023191 212 YERIRKVCNKQKAIMLADMA 231 (286)
Q Consensus 212 l~~I~~ia~~~~~~vivD~a 231 (286)
-.+|.++|+++|++++.|-.
T Consensus 29 A~~I~e~A~e~gVPi~e~~~ 48 (93)
T 2vt1_B 29 ALAVRKYANEVGIPTVRDVK 48 (93)
T ss_dssp HHHHHHHHHHTTCCEEECHH
T ss_pred HHHHHHHHHHcCCCEEECHH
Confidence 56899999999999999975
No 256
>1wpc_A Glucan 1,4-alpha-maltohexaosidase; maltohexaose-producing amylase, alpha-amylase, acarbose, HYD; HET: ACI GLC GAL; 1.90A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1wp6_A* 2d3l_A* 2d3n_A* 2die_A 2gjp_A* 2gjr_A 1w9x_A*
Probab=43.03 E-value=13 Score=33.52 Aligned_cols=27 Identities=7% Similarity=0.094 Sum_probs=24.0
Q ss_pred CCCCccCHHHHHHHHHhcCCEEEEecc
Q 023191 205 AYARLYDYERIRKVCNKQKAIMLADMA 231 (286)
Q Consensus 205 n~g~~~~l~~I~~ia~~~~~~vivD~a 231 (286)
.+|+..+++++++-||++|+-||.|.+
T Consensus 78 ~~Gt~~df~~Lv~~aH~~Gi~VilD~V 104 (485)
T 1wpc_A 78 KYGTRSQLQAAVTSLKNNGIQVYGDVV 104 (485)
T ss_dssp SSCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 356777899999999999999999987
No 257
>1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A* 1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A*
Probab=42.83 E-value=12 Score=33.37 Aligned_cols=27 Identities=7% Similarity=0.084 Sum_probs=24.2
Q ss_pred CCCCccCHHHHHHHHHhcCCEEEEecc
Q 023191 205 AYARLYDYERIRKVCNKQKAIMLADMA 231 (286)
Q Consensus 205 n~g~~~~l~~I~~ia~~~~~~vivD~a 231 (286)
.+|+..+++++++-||++|+-||.|.+
T Consensus 60 ~~Gt~~dfk~Lv~~aH~~Gi~VilD~V 86 (448)
T 1g94_A 60 RGGNRAQFIDMVNRCSAAGVDIYVDTL 86 (448)
T ss_dssp TTBCHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred CCCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 356777899999999999999999988
No 258
>1hvx_A Alpha-amylase; hydrolase, glycosyltransferase, thermostability; 2.00A {Geobacillus stearothermophilus} SCOP: b.71.1.1 c.1.8.1
Probab=42.66 E-value=14 Score=33.85 Aligned_cols=28 Identities=14% Similarity=0.222 Sum_probs=25.1
Q ss_pred CCCCCccCHHHHHHHHHhcCCEEEEecc
Q 023191 204 SAYARLYDYERIRKVCNKQKAIMLADMA 231 (286)
Q Consensus 204 ~n~g~~~~l~~I~~ia~~~~~~vivD~a 231 (286)
+.+|+..+++++++-||++|+-||.|.+
T Consensus 76 p~~Gt~~dfk~Lv~~aH~~Gi~VilD~V 103 (515)
T 1hvx_A 76 TKYGTKAQYLQAIQAAHAAGMQVYADVV 103 (515)
T ss_dssp CSSCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 4467888899999999999999999987
No 259
>3c01_E Surface presentation of antigens protein SPAS; auto cleavage protein, flagella, ESCU, YSCU, intein, T3SS, M inner membrane, transmembrane; 2.60A {Salmonella typhimurium} SCOP: d.367.1.1
Probab=41.73 E-value=13 Score=25.88 Aligned_cols=20 Identities=15% Similarity=0.194 Sum_probs=17.9
Q ss_pred HHHHHHHHHhcCCEEEEecc
Q 023191 212 YERIRKVCNKQKAIMLADMA 231 (286)
Q Consensus 212 l~~I~~ia~~~~~~vivD~a 231 (286)
-.+|.++|+++|++++.|-.
T Consensus 29 A~~I~e~A~e~gVPi~e~~~ 48 (98)
T 3c01_E 29 ALAVRAYAEKVGVPVIVDIK 48 (98)
T ss_dssp HHHHHHHHHHHTCCEEECHH
T ss_pred HHHHHHHHHHcCCCeecCHH
Confidence 56899999999999999975
No 260
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=41.36 E-value=1.3e+02 Score=23.60 Aligned_cols=91 Identities=8% Similarity=-0.026 Sum_probs=48.3
Q ss_pred eEEeCCChH-HHHHHHHHhcCCC-CeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhh
Q 023191 115 NVQSLSGSP-SNFQVYTALLKPH-DRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSAT 192 (286)
Q Consensus 115 ~v~~~sG~~-a~~~~l~a~~~~G-d~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~ 192 (286)
.|++|-|+. .=..+...+++.| -+|++..-.-.... ......+..+..++ -|.+++++++.
T Consensus 25 ~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~-----------~~~~~~~~~~~~Dl------~d~~~~~~~~~ 87 (236)
T 3qvo_A 25 NVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIH-----------KPYPTNSQIIMGDV------LNHAALKQAMQ 87 (236)
T ss_dssp EEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSC-----------SSCCTTEEEEECCT------TCHHHHHHHHT
T ss_pred EEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhc-----------ccccCCcEEEEecC------CCHHHHHHHhc
Confidence 366655444 3344778889999 57766542111100 01111233343232 37888988886
Q ss_pred hcCCcEEEEcCCCCCCccCHHHHHHHHHhcCC
Q 023191 193 LFRPKLIVAGASAYARLYDYERIRKVCNKQKA 224 (286)
Q Consensus 193 ~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~ 224 (286)
. ..+|+.+..........+.+.+.+++.+.
T Consensus 88 ~--~D~vv~~a~~~~~~~~~~~~~~~~~~~~~ 117 (236)
T 3qvo_A 88 G--QDIVYANLTGEDLDIQANSVIAAMKACDV 117 (236)
T ss_dssp T--CSEEEEECCSTTHHHHHHHHHHHHHHTTC
T ss_pred C--CCEEEEcCCCCchhHHHHHHHHHHHHcCC
Confidence 4 56776542221122235678888888764
No 261
>1mxg_A Alpha amylase; hyperthermostable, family 13 glycosyl hydrola (beta/alpha)8-barrel, hydrolase; HET: ACR ETE; 1.60A {Pyrococcus woesei} SCOP: b.71.1.1 c.1.8.1 PDB: 1mwo_A* 1mxd_A* 3qgv_A*
Probab=41.24 E-value=15 Score=32.75 Aligned_cols=28 Identities=11% Similarity=0.212 Sum_probs=24.6
Q ss_pred CCCCCccCHHHHHHHHHhcCCEEEEecc
Q 023191 204 SAYARLYDYERIRKVCNKQKAIMLADMA 231 (286)
Q Consensus 204 ~n~g~~~~l~~I~~ia~~~~~~vivD~a 231 (286)
+.+|+..+++++++-||++|+-||.|.+
T Consensus 81 ~~~Gt~~df~~lv~~~H~~Gi~VilD~V 108 (435)
T 1mxg_A 81 TRFGSKEELVRLIQTAHAYGIKVIADVV 108 (435)
T ss_dssp CSSCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 3467778899999999999999999987
No 262
>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A*
Probab=41.10 E-value=16 Score=33.58 Aligned_cols=28 Identities=11% Similarity=0.093 Sum_probs=25.1
Q ss_pred CCCCCccCHHHHHHHHHhcCCEEEEecc
Q 023191 204 SAYARLYDYERIRKVCNKQKAIMLADMA 231 (286)
Q Consensus 204 ~n~g~~~~l~~I~~ia~~~~~~vivD~a 231 (286)
+.+|+..+++++++-||++|+-||.|.+
T Consensus 87 p~~Gt~~dfk~Lv~~aH~~GI~VilD~V 114 (527)
T 1gcy_A 87 GRYGSDAQLRQAASALGGAGVKVLYDVV 114 (527)
T ss_dssp SSSCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 4567788899999999999999999988
No 263
>1xrs_B D-lysine 5,6-aminomutase beta subunit; TIM barrel, rossmann domain, PLP, cobalamin, 5'-deoxyad radical, adenosylcobalamin; HET: B12 PLP 5AD; 2.80A {Clostridium sticklandii} SCOP: c.23.6.1 d.230.4.1
Probab=40.99 E-value=78 Score=26.13 Aligned_cols=51 Identities=6% Similarity=0.179 Sum_probs=39.7
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCCC---CccCHHHHHHHHHhcC----CEEEEecc
Q 023191 181 YIDYDQLEKSATLFRPKLIVAGASAYA---RLYDYERIRKVCNKQK----AIMLADMA 231 (286)
Q Consensus 181 ~~d~e~l~~~i~~~~tk~v~i~~~n~g---~~~~l~~I~~ia~~~~----~~vivD~a 231 (286)
.+.++++.+.+.++++.+|.++...+. ....+.++.+.+++.+ +.|++=++
T Consensus 166 ~vp~e~iv~aa~e~~~d~VglS~l~t~~~~~~~~~~~~i~~L~~~g~~~~i~vivGG~ 223 (262)
T 1xrs_B 166 QVANEDFIKKAVELEADVLLVSQTVTQKNVHIQNMTHLIELLEAEGLRDRFVLLCGGP 223 (262)
T ss_dssp SBCHHHHHHHHHHTTCSEEEEECCCCTTSHHHHHHHHHHHHHHHTTCGGGSEEEEECT
T ss_pred CCCHHHHHHHHHHcCCCEEEEEeecCCccchHHHHHHHHHHHHhcCCCCCCEEEEECC
Confidence 478899988888779999999866655 5566788888887765 78887766
No 264
>4aie_A Glucan 1,6-alpha-glucosidase; hydrolase, glycoside hydrolase 13; HET: MES GOL; 2.05A {Lactobacillus acidophilus ncfm}
Probab=40.46 E-value=15 Score=33.50 Aligned_cols=25 Identities=8% Similarity=0.267 Sum_probs=22.0
Q ss_pred CCccCHHHHHHHHHhcCCEEEEecc
Q 023191 207 ARLYDYERIRKVCNKQKAIMLADMA 231 (286)
Q Consensus 207 g~~~~l~~I~~ia~~~~~~vivD~a 231 (286)
|+..+++++++-||++|+-||.|.+
T Consensus 77 Gt~~dfk~Lv~~aH~~Gi~VilD~V 101 (549)
T 4aie_A 77 GTMADMDELISKAKEHHIKIVMDLV 101 (549)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 4556799999999999999999998
No 265
>2guy_A Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; HET: NAG BMA; 1.59A {Aspergillus oryzae} SCOP: b.71.1.1 c.1.8.1 PDB: 2gvy_A* 3kwx_A* 6taa_A 7taa_A* 2taa_A
Probab=40.35 E-value=15 Score=33.00 Aligned_cols=28 Identities=11% Similarity=0.288 Sum_probs=25.1
Q ss_pred CCCCCccCHHHHHHHHHhcCCEEEEecc
Q 023191 204 SAYARLYDYERIRKVCNKQKAIMLADMA 231 (286)
Q Consensus 204 ~n~g~~~~l~~I~~ia~~~~~~vivD~a 231 (286)
+.+|+..+++++++-||++|+-||.|.+
T Consensus 92 p~~Gt~~df~~lv~~~H~~Gi~VilD~V 119 (478)
T 2guy_A 92 ENYGTADDLKALSSALHERGMYLMVDVV 119 (478)
T ss_dssp TTSCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred ccCCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 4567788899999999999999999987
No 266
>3cpq_A 50S ribosomal protein L30E; RNA-protein, elongation factor, ribonucleoprotein, structural genomics, NPPSFA; 1.90A {Methanocaldococcus jannaschii}
Probab=39.79 E-value=46 Score=23.30 Aligned_cols=42 Identities=12% Similarity=-0.056 Sum_probs=29.3
Q ss_pred HHHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEE
Q 023191 184 YDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIML 227 (286)
Q Consensus 184 ~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~vi 227 (286)
.++..+.++..+.++|++. ++. ...-...|..+|++++++++
T Consensus 26 ~~~v~kai~~gka~lViiA-~D~-~~~~~~~l~~~c~~~~Vp~~ 67 (110)
T 3cpq_A 26 SKRTIKFVKHGEGKLVVLA-GNI-PKDLEEDVKYYAKLSNIPVY 67 (110)
T ss_dssp HHHHHHHHHTTCCSEEEEC-TTC-BHHHHHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHHcCCceEEEEe-CCC-CHHHHHHHHHHHHHcCCCEE
Confidence 4567777776578888884 332 22336788889999999854
No 267
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=39.74 E-value=45 Score=28.91 Aligned_cols=51 Identities=10% Similarity=0.023 Sum_probs=42.1
Q ss_pred CCCCHHHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEEEec
Q 023191 180 GYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADM 230 (286)
Q Consensus 180 ~~~d~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~vivD~ 230 (286)
...+.+++++.+......+|.+.+...|.+.+..+|+++|+++|+.++.=+
T Consensus 245 ~i~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~ 295 (379)
T 2rdx_A 245 CVTGLHMAQRIVADRGAEICCLKISNLGGLSKARRTRDFLIDNRMPVVAED 295 (379)
T ss_dssp TCCSHHHHHHHHHHTCCSEEEEETTTTTSHHHHHHHHHHHHHTTCCEEEEC
T ss_pred CcCCHHHHHHHHHcCCCCEEEEeccccCCHHHHHHHHHHHHHcCCeEEEee
Confidence 345789999998875678888888778988899999999999999766653
No 268
>2fym_A Enolase; RNA degradosome, enolase, lyase; 1.60A {Escherichia coli} SCOP: c.1.11.1 d.54.1.1 PDB: 1e9i_A 3h8a_A
Probab=39.43 E-value=50 Score=29.36 Aligned_cols=50 Identities=8% Similarity=-0.073 Sum_probs=40.0
Q ss_pred CCCCHHHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEEEe
Q 023191 180 GYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 229 (286)
Q Consensus 180 ~~~d~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~vivD 229 (286)
...+..++++.+...-..+|.+.+...|.+.+..+++++|+++|+.+++-
T Consensus 319 ~~~~~~~~~~~i~~~a~d~i~ik~~~~GGite~~~i~~~A~~~g~~~~~~ 368 (431)
T 2fym_A 319 FVTNTKILKEGIEKGIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVIS 368 (431)
T ss_dssp TTTCHHHHHHHHHTTCCSEEEECGGGTCSHHHHHHHHHHHHHTTCEEEEE
T ss_pred ccCCHHHHHHHHHhCCCCEEEECccccCCHHHHHHHHHHHHHCCCeEEEe
Confidence 44577888888876446777777777888889999999999999988764
No 269
>3v7e_A Ribosome-associated protein L7AE-like; RNA-protein complex, K-turn, L7AE-like, A member L7AE/L30E superfamily; HET: SAM; 2.80A {Bacillus subtilis}
Probab=39.24 E-value=30 Score=22.90 Aligned_cols=44 Identities=11% Similarity=-0.080 Sum_probs=30.1
Q ss_pred HHHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEEEe
Q 023191 184 YDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 229 (286)
Q Consensus 184 ~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~vivD 229 (286)
..+..+++++.+.++|++. ++... .-.+.|-.+|++++++++.-
T Consensus 16 ~~~v~kai~~gkaklViiA-~D~~~-~~~~~i~~lc~~~~Ip~~~v 59 (82)
T 3v7e_A 16 TKQTVKALKRGSVKEVVVA-KDADP-ILTSSVVSLAEDQGISVSMV 59 (82)
T ss_dssp HHHHHHHHTTTCEEEEEEE-TTSCH-HHHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHcCCeeEEEEe-CCCCH-HHHHHHHHHHHHcCCCEEEE
Confidence 4567777877577888884 22221 34678889999999976653
No 270
>1sjd_A N-acylamino acid racemase; lyase, isomerase; HET: NPG; 1.87A {Amycolatopsis SP} SCOP: c.1.11.2 d.54.1.1 PDB: 1sja_A* 1sjb_A* 1sjc_A*
Probab=39.16 E-value=48 Score=28.56 Aligned_cols=49 Identities=8% Similarity=0.140 Sum_probs=39.6
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEEEe
Q 023191 181 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 229 (286)
Q Consensus 181 ~~d~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~vivD 229 (286)
..+.+++++.+......+|.+.+...|.+.+..+|+++|+++|+.+++=
T Consensus 242 ~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~ 290 (368)
T 1sjd_A 242 IVSARAAADAIKLGAVQIVNIKPGRVGGYLEARRVHDVCAAHGIPVWCG 290 (368)
T ss_dssp CCSHHHHHHHHHTTCCSEEEECTTTTTSHHHHHHHHHHHHHTTCCEEEC
T ss_pred cCCHHHHHHHHHcCCCCEEEecccccCCHHHHHHHHHHHHHcCCcEEeC
Confidence 3578888888876457888887777888888999999999999985443
No 271
>2xzm_U Ribosomal protein L7AE containing protein; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_U
Probab=38.66 E-value=64 Score=23.32 Aligned_cols=52 Identities=6% Similarity=0.091 Sum_probs=32.8
Q ss_pred HHHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEE-Eeccccccc
Q 023191 184 YDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIML-ADMAHISGL 236 (286)
Q Consensus 184 ~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~vi-vD~a~~~g~ 236 (286)
..+..+++++.+.++|++. ++.....-...|-.+|++++++++ ++.-.-+|.
T Consensus 29 ~~~v~Kai~~gka~LViiA-~D~~p~~~~~~i~~lc~~~~Ip~~~v~sk~~LG~ 81 (126)
T 2xzm_U 29 LHEVLRTIEAKQALFVCVA-EDCDQGNYVKLVKALCAKNEIKYVSVPKRASLGE 81 (126)
T ss_dssp HHHHHHHHHHTCCSEEEEE-SSCCSTTHHHHHHHHHHHTTCCEEEESCSHHHHH
T ss_pred HHHHHHHHHcCCceEEEEe-CCCChHHHHHHHHHHHHHhCCCEEEECCHHHHHH
Confidence 4556677777688999884 222112225788899999999754 554433443
No 272
>1w41_A 50S ribosomal protein L30E; electrostatic interactions, thermostability, protein engineering; 1.7A {Thermococcus celer} SCOP: d.79.3.1 PDB: 3n4y_A 3lfo_A 1w40_A 1go0_A 1go1_A 1h7m_A 1w42_A 1w3e_X 3ra6_A 3ra5_A 3n4z_A 2bo1_A
Probab=38.64 E-value=47 Score=22.77 Aligned_cols=43 Identities=14% Similarity=-0.045 Sum_probs=29.8
Q ss_pred HHHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEEE
Q 023191 184 YDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLA 228 (286)
Q Consensus 184 ~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~viv 228 (286)
.++..+.++..+.++|++.. +.+ ..-.+.|..+|++++++++.
T Consensus 21 ~~~v~kai~~gka~lViiA~-D~~-~~~~~~l~~~c~~~~vp~~~ 63 (101)
T 1w41_A 21 ARKSIQYAKMGGAKLIIVAR-NAR-PDIKEDIEYYARLSGIPVYE 63 (101)
T ss_dssp HHHHHHHHHHTCCSEEEEET-TSC-HHHHHHHHHHHHHHTCCEEE
T ss_pred HHHHHHHHHcCCCcEEEEeC-CCC-HHHHHHHHHHHHhcCCCEEE
Confidence 45677777776788888852 222 23367888899999998553
No 273
>3mio_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin, ribulose-5-phosphate, FAD, FMN; 1.80A {Mycobacterium tuberculosis} SCOP: d.115.1.0 PDB: 3mgz_A 3mk5_A
Probab=38.61 E-value=61 Score=25.71 Aligned_cols=34 Identities=6% Similarity=0.190 Sum_probs=26.9
Q ss_pred CCcEEEEcC--CC-CCCccCHHHHHHHHHhcCCEEEE
Q 023191 195 RPKLIVAGA--SA-YARLYDYERIRKVCNKQKAIMLA 228 (286)
Q Consensus 195 ~tk~v~i~~--~n-~g~~~~l~~I~~ia~~~~~~viv 228 (286)
.|.+++..- -| -|......++.++|++||+.++.
T Consensus 158 ~Pa~vicEiv~~~~dG~mar~~~l~~fA~~h~l~~it 194 (206)
T 3mio_A 158 QPAGAICEIVSQKDEGSMAHTDELRVFADEHGLALIT 194 (206)
T ss_dssp CSBEEEEEBBCSSSTTSBCCHHHHHHHHHHHTCEEEE
T ss_pred CceEEEEEEeeeCCCCCcCCHHHHHHHHHHcCCcEEE
Confidence 677776544 44 57888899999999999998774
No 274
>3e2i_A Thymidine kinase; Zn-binding, ATP-binding, DNA synthesis, nucleotide-B transferase; HET: MSE; 2.01A {Staphylococcus aureus}
Probab=38.06 E-value=40 Score=27.07 Aligned_cols=34 Identities=6% Similarity=-0.024 Sum_probs=23.2
Q ss_pred CCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEEEe
Q 023191 195 RPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 229 (286)
Q Consensus 195 ~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~vivD 229 (286)
+..+|+|....+....-++.+.+++ ..|+.||+=
T Consensus 101 ~~dvV~IDEaQFf~~~~v~~l~~la-~~gi~Vi~~ 134 (219)
T 3e2i_A 101 NVDVIGIDEVQFFDDEIVSIVEKLS-ADGHRVIVA 134 (219)
T ss_dssp TCSEEEECCGGGSCTHHHHHHHHHH-HTTCEEEEE
T ss_pred CCCEEEEechhcCCHHHHHHHHHHH-HCCCEEEEe
Confidence 6778888765544433466777777 578888863
No 275
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=37.82 E-value=58 Score=26.84 Aligned_cols=55 Identities=16% Similarity=0.089 Sum_probs=38.1
Q ss_pred CCHHHHHHHhh----hcCCcEEEEc-----CCCCC-CccCHHHHHHHHHhcCCEEEEeccccccc
Q 023191 182 IDYDQLEKSAT----LFRPKLIVAG-----ASAYA-RLYDYERIRKVCNKQKAIMLADMAHISGL 236 (286)
Q Consensus 182 ~d~e~l~~~i~----~~~tk~v~i~-----~~n~g-~~~~l~~I~~ia~~~~~~vivD~a~~~g~ 236 (286)
.+++++..++. ..++.++++. .+|++ ...++..|..+.+..+++||.|..|+.|.
T Consensus 141 ~t~~e~~~Av~~i~~~Gn~~i~L~~RG~~~~~~y~~~~v~L~ai~~lk~~~~~pVi~d~sH~~g~ 205 (262)
T 1zco_A 141 NTIQELLYSAEYIMAQGNENVILCERGIRTFETATRFTLDISAVPVVKELSHLPIIVDPSHPAGR 205 (262)
T ss_dssp CCHHHHHHHHHHHHTTTCCCEEEEECCBCCSCCSSSSBCCTTHHHHHHHHBSSCEEECSSTTTCS
T ss_pred CCHHHHHHHHHHHHHCCCCeEEEEECCCCCCCCcChhhcCHHHHHHHHhhhCCCEEEEcCCCCCc
Confidence 47888877663 2245666653 24544 34567888888777799999999998775
No 276
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=37.52 E-value=1.1e+02 Score=24.47 Aligned_cols=48 Identities=17% Similarity=0.162 Sum_probs=35.5
Q ss_pred CHHHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEEEecc
Q 023191 183 DYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMA 231 (286)
Q Consensus 183 d~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~vivD~a 231 (286)
+.+++++++.. ...+|++..........++++.+.++++++.+++|..
T Consensus 90 ~~~~i~~~~~a-Gad~I~l~~~~~~~p~~l~~~i~~~~~~g~~v~~~v~ 137 (229)
T 3q58_A 90 YLQDVDALAQA-GADIIAFDASFRSRPVDIDSLLTRIRLHGLLAMADCS 137 (229)
T ss_dssp SHHHHHHHHHH-TCSEEEEECCSSCCSSCHHHHHHHHHHTTCEEEEECS
T ss_pred cHHHHHHHHHc-CCCEEEECccccCChHHHHHHHHHHHHCCCEEEEecC
Confidence 46677777766 7788877543322335789999999999999999864
No 277
>1wza_A Alpha-amylase A; hydrolase, halophilic, thermophilic; 1.60A {Halothermothrix orenii} SCOP: b.71.1.1 c.1.8.1
Probab=37.44 E-value=16 Score=33.00 Aligned_cols=26 Identities=15% Similarity=0.469 Sum_probs=22.8
Q ss_pred CCCccCHHHHHHHHHhcCCEEEEecc
Q 023191 206 YARLYDYERIRKVCNKQKAIMLADMA 231 (286)
Q Consensus 206 ~g~~~~l~~I~~ia~~~~~~vivD~a 231 (286)
+|+..+++++++-||++|+-||.|.+
T Consensus 78 ~Gt~~d~~~Lv~~aH~~Gi~VilD~V 103 (488)
T 1wza_A 78 YGTLEDFHKLVEAAHQRGIKVIIDLP 103 (488)
T ss_dssp GCCHHHHHHHHHHHHHTTCEEEEECC
T ss_pred cCCHHHHHHHHHHHHHCCCEEEEEec
Confidence 45666799999999999999999988
No 278
>3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=37.42 E-value=67 Score=27.93 Aligned_cols=50 Identities=6% Similarity=-0.013 Sum_probs=41.6
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEEEec
Q 023191 181 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADM 230 (286)
Q Consensus 181 ~~d~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~vivD~ 230 (286)
..+.+++++.+......+|.+.+...|.+.+..+|+++|+++|+.++.=+
T Consensus 254 ~~~~~~~~~~i~~~~~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~~~ 303 (383)
T 3i4k_A 254 VWTPAEALAVVKAQAADVIALKTTKHGGLLESKKIAAIAEAGGLACHGAT 303 (383)
T ss_dssp CSSHHHHHHHHHHTCCSEEEECTTTTTSHHHHHHHHHHHHHTTCEEEECC
T ss_pred cCCHHHHHHHHHcCCCCEEEEcccccCCHHHHHHHHHHHHHcCCeEEeCC
Confidence 45788888888764578888888888989999999999999999987543
No 279
>1r0m_A N-acylamino acid racemase; isomerase; 1.30A {Deinococcus radiodurans} SCOP: c.1.11.2 d.54.1.1 PDB: 1xpy_A* 1xs2_A 2ggj_A 2ggi_A 2ggh_A* 2ggg_A* 2fkp_A
Probab=37.36 E-value=54 Score=28.37 Aligned_cols=48 Identities=13% Similarity=0.035 Sum_probs=39.3
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEEE
Q 023191 181 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLA 228 (286)
Q Consensus 181 ~~d~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~viv 228 (286)
..+.+++++.+......+|.+.+...|.+.+..+|+++|+++|+.+++
T Consensus 248 ~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~ 295 (375)
T 1r0m_A 248 VASASDARKALALGAGGVINLKVARVGGHAESRRVHDVAQSFGAPVWC 295 (375)
T ss_dssp CCSHHHHHHHHHHTSCSEEEECTTTTTSHHHHHHHHHHHHHTTCCEEE
T ss_pred cCCHHHHHHHHHhCCCCEEEECcchhcCHHHHHHHHHHHHHcCCcEEe
Confidence 357888888887645788888777788888999999999999998544
No 280
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=37.18 E-value=28 Score=25.48 Aligned_cols=50 Identities=12% Similarity=0.139 Sum_probs=34.9
Q ss_pred CCHHHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhc---CCEEEEecc
Q 023191 182 IDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQ---KAIMLADMA 231 (286)
Q Consensus 182 ~d~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~---~~~vivD~a 231 (286)
..++++.+.+.+.++.+|.++.........++++.+..++. ++.|++=++
T Consensus 41 ~p~e~~v~~a~~~~~d~v~lS~~~~~~~~~~~~~i~~l~~~g~~~i~v~vGG~ 93 (137)
T 1ccw_A 41 SPQELFIKAAIETKADAILVSSLYGQGEIDCKGLRQKCDEAGLEGILLYVGGN 93 (137)
T ss_dssp ECHHHHHHHHHHHTCSEEEEEECSSTHHHHHTTHHHHHHHTTCTTCEEEEEES
T ss_pred CCHHHHHHHHHhcCCCEEEEEecCcCcHHHHHHHHHHHHhcCCCCCEEEEECC
Confidence 56788888887779999999866644444566667666665 466776554
No 281
>1kcz_A Beta-methylaspartase; beta zigzag, alpha/beta-barrel, lyase; 1.90A {Clostridium tetanomorphum} SCOP: c.1.11.2 d.54.1.1 PDB: 1kd0_A* 3zvi_A 3zvh_A
Probab=37.18 E-value=68 Score=28.21 Aligned_cols=57 Identities=2% Similarity=-0.070 Sum_probs=44.5
Q ss_pred EecccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEEEe
Q 023191 171 MPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 229 (286)
Q Consensus 171 v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~vivD 229 (286)
+|+-.+ + ...+.+++++.+...-..+|.+.++..|.+.+..+++++|+++|+.+++=
T Consensus 302 ipIa~d-E-~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~i~~~A~~~gi~~~~~ 358 (413)
T 1kcz_A 302 AELVAD-E-WCNTVEDVKFFTDNKAGHMVQIKTPDLGGVNNIADAIMYCKANGMGAYCG 358 (413)
T ss_dssp EEEEEC-T-TCCSHHHHHHHHHTTCSSEEEECTGGGSSTHHHHHHHHHHHHTTCEEEEC
T ss_pred CcEEeC-C-CcCCHHHHHHHHHhCCCCEEEeCccccCCHHHHHHHHHHHHHcCCEEEec
Confidence 444444 2 35688999999876456788887777888888999999999999988873
No 282
>3u5e_c L32, RP73, YL38, 60S ribosomal protein L30; translation, ribosome, ribosomal R ribosomal protein, STM1, eukaryotic ribosome; 3.00A {Saccharomyces cerevisiae} PDB: 3izc_f 3izs_f 3o58_Z 3o5h_Z 1t0k_B 3u5i_c 4b6a_c 1ck2_A 1cn7_A 1nmu_B* 3jyw_2
Probab=37.11 E-value=63 Score=22.40 Aligned_cols=43 Identities=16% Similarity=0.128 Sum_probs=30.9
Q ss_pred HHHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEEE
Q 023191 184 YDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLA 228 (286)
Q Consensus 184 ~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~viv 228 (286)
.++..+.++..+.++|++. .+.+ ..-.++|..+|++++++++.
T Consensus 27 ~~~v~kai~~gkaklVilA-~D~~-~~~~~~i~~~c~~~~ip~~~ 69 (105)
T 3u5e_c 27 YKSTVKSLRQGKSKLIIIA-ANTP-VLRKSELEYYAMLSKTKVYY 69 (105)
T ss_dssp HHHHHHHHHTTCCSEEEEC-TTSC-HHHHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHcCCceEEEEe-CCCC-HHHHHHHHHHHHHcCCCEEE
Confidence 4667778877688999884 2222 22367888999999999983
No 283
>2aaa_A Alpha-amylase; glycosidase; 2.10A {Aspergillus niger} SCOP: b.71.1.1 c.1.8.1
Probab=37.04 E-value=18 Score=32.71 Aligned_cols=28 Identities=7% Similarity=0.241 Sum_probs=25.0
Q ss_pred CCCCCccCHHHHHHHHHhcCCEEEEecc
Q 023191 204 SAYARLYDYERIRKVCNKQKAIMLADMA 231 (286)
Q Consensus 204 ~n~g~~~~l~~I~~ia~~~~~~vivD~a 231 (286)
+.+|+..+++++++-||++|+-||.|.+
T Consensus 92 ~~~Gt~~df~~lv~~~H~~Gi~VilD~V 119 (484)
T 2aaa_A 92 SNFGTADNLKSLSDALHARGMYLMVDVV 119 (484)
T ss_dssp TTTCCHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred cccCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 4567778899999999999999999988
No 284
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=36.89 E-value=1.1e+02 Score=24.43 Aligned_cols=48 Identities=17% Similarity=0.192 Sum_probs=35.5
Q ss_pred CHHHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEEEecc
Q 023191 183 DYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMA 231 (286)
Q Consensus 183 d~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~vivD~a 231 (286)
+.+++++++.. ....|++..........++++.+.++++++.+++|..
T Consensus 90 ~~~~i~~~~~~-Gad~V~l~~~~~~~p~~l~~~i~~~~~~g~~v~~~v~ 137 (232)
T 3igs_A 90 FLDDVDALAQA-GAAIIAVDGTARQRPVAVEALLARIHHHHLLTMADCS 137 (232)
T ss_dssp SHHHHHHHHHH-TCSEEEEECCSSCCSSCHHHHHHHHHHTTCEEEEECC
T ss_pred cHHHHHHHHHc-CCCEEEECccccCCHHHHHHHHHHHHHCCCEEEEeCC
Confidence 56778777766 7778877533322336789999999999999999864
No 285
>4a18_G RPL30; ribosome, eukaryotic initiation factor 6, EIF6, transla large ribosomal subunit, rRNA; 3.52A {Tetrahymena thermophila} PDB: 4a19_G 4a1b_G 4a1d_G 4adx_6
Probab=36.36 E-value=67 Score=22.16 Aligned_cols=43 Identities=12% Similarity=0.040 Sum_probs=30.2
Q ss_pred HHHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEEE
Q 023191 184 YDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLA 228 (286)
Q Consensus 184 ~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~viv 228 (286)
.++..+.++..+.++|++. .+.+ ..-.++|..+|++++++++.
T Consensus 27 ~~~v~kai~~gkaklViiA-~D~~-~~~~~~i~~~c~~~~ip~~~ 69 (104)
T 4a18_G 27 YKSTIKAIRNGTAKLVFIS-NNCP-TVRKSEIEYYASLAQISIHH 69 (104)
T ss_dssp HHHHHHHHHHTCCCEEEEC-TTSC-HHHHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHcCCceEEEEe-CCCC-HHHHHHHHHHHHHcCCcEEE
Confidence 4667777877678898884 2211 12267888899999999883
No 286
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=36.28 E-value=47 Score=26.10 Aligned_cols=42 Identities=14% Similarity=0.133 Sum_probs=32.4
Q ss_pred CHHHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEEE
Q 023191 183 DYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLA 228 (286)
Q Consensus 183 d~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~viv 228 (286)
|.++|++++.. +...+++-. +.+..++++.+.+++++-.+++
T Consensus 18 ~~~~l~~al~s-~~~~ifll~---g~i~~l~~~v~~lk~~~K~v~V 59 (192)
T 3kts_A 18 NQKDMEKILEL-DLTYMVMLE---THVAQLKALVKYAQAGGKKVLL 59 (192)
T ss_dssp SSHHHHHHTTS-SCCEEEECS---EETTTHHHHHHHHHHTTCEEEE
T ss_pred CHHHHHHHHcC-CCCEEEEec---CcHHHHHHHHHHHHHcCCeEEE
Confidence 66889998876 677887753 3457899999999999876555
No 287
>1uhe_A Aspartate 1-decarboxylase alpha chain; double-PSI beta barrel, lyase; HET: NSN; 1.55A {Helicobacter pylori} SCOP: b.52.2.1 PDB: 1uhd_A
Probab=36.20 E-value=43 Score=23.10 Aligned_cols=14 Identities=7% Similarity=0.413 Sum_probs=10.4
Q ss_pred hhcCCcEEEEcCCC
Q 023191 192 TLFRPKLIVAGASA 205 (286)
Q Consensus 192 ~~~~tk~v~i~~~n 205 (286)
..++|++|+++..|
T Consensus 73 ~~~~P~vV~vd~~N 86 (97)
T 1uhe_A 73 NAHKPSIVLVDEKN 86 (97)
T ss_dssp HHCCCEEEEECTTS
T ss_pred hcCCCEEEEECCCC
Confidence 34689999987666
No 288
>2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus}
Probab=36.01 E-value=17 Score=32.70 Aligned_cols=26 Identities=8% Similarity=0.045 Sum_probs=22.5
Q ss_pred CCCccCHHHHHHHHHhcCCEEEEecc
Q 023191 206 YARLYDYERIRKVCNKQKAIMLADMA 231 (286)
Q Consensus 206 ~g~~~~l~~I~~ia~~~~~~vivD~a 231 (286)
+|+..+++++++-||++|+-||.|.+
T Consensus 93 ~Gt~~df~~lv~~~h~~Gi~VilD~V 118 (475)
T 2z1k_A 93 LGGNEALRHLLEVAHAHGVRVILDGV 118 (475)
T ss_dssp GTCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 45666789999999999999999987
No 289
>3q45_A Mandelate racemase/muconate lactonizing enzyme FA possible chloromuconate cycloisomerase...; (beta/alpha)8-barrel; 3.00A {Cytophaga hutchinsonii} PDB: 3q4d_A
Probab=35.84 E-value=59 Score=28.13 Aligned_cols=50 Identities=8% Similarity=-0.064 Sum_probs=42.1
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEEEec
Q 023191 181 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADM 230 (286)
Q Consensus 181 ~~d~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~vivD~ 230 (286)
..+.+++++.+......+|.+.+...|.+.+..+|+++|+++|+.++.-+
T Consensus 244 ~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~i~~~A~~~gi~~~~~~ 293 (368)
T 3q45_A 244 CCNSFDAERLIQIQACDSFNLKLSKSAGITNALNIIRLAEQAHMPVQVGG 293 (368)
T ss_dssp CCSHHHHHHHHHTTCCSEEEECTTTTTSHHHHHHHHHHHHHTTCCEEECC
T ss_pred cCCHHHHHHHHHcCCCCeEEechhhcCCHHHHHHHHHHHHHcCCcEEecC
Confidence 45788999988764678888888888999999999999999999887644
No 290
>2ale_A SNU13, NHP2/L7AE family protein YEL026W; splicing, RNA, yeast, His-TAG, RNA binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: d.79.3.1 PDB: 1zwz_A 2ozb_A 3siu_A 3siv_A 1e7k_A
Probab=35.74 E-value=48 Score=24.30 Aligned_cols=51 Identities=8% Similarity=0.092 Sum_probs=32.0
Q ss_pred HHHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEE-EEecccccc
Q 023191 184 YDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIM-LADMAHISG 235 (286)
Q Consensus 184 ~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~v-ivD~a~~~g 235 (286)
..+..++++..+.++|++. .+.....-...|-.+|+++++++ +++.-.-+|
T Consensus 37 ~~~v~kai~~gkakLViiA-~D~~p~~~~~~l~~lc~~~~VP~~~v~sk~eLG 88 (134)
T 2ale_A 37 ANEATKTLNRGISEFIIMA-ADCEPIEILLHLPLLCEDKNVPYVFVPSRVALG 88 (134)
T ss_dssp HHHHHHHHHHTCEEEEEEE-TTCSSGGGGTHHHHHHHHHTCCEEEESCHHHHH
T ss_pred chHHHHHHHhCCCeEEEEe-CCCCHHHHHHHHHHHHHhcCCCEEEECCHHHHH
Confidence 4566777777577888884 22222223667789999999974 444433344
No 291
>1vc3_B L-aspartate-alpha-decarboxylase heavy chain; tetramer, pyruvoyl group, riken structural genomics/proteomi initiative, RSGI; 1.50A {Thermus thermophilus} PDB: 2eeo_B
Probab=35.55 E-value=39 Score=23.25 Aligned_cols=14 Identities=7% Similarity=0.373 Sum_probs=10.1
Q ss_pred hhcCCcEEEEcCCC
Q 023191 192 TLFRPKLIVAGASA 205 (286)
Q Consensus 192 ~~~~tk~v~i~~~n 205 (286)
..++|++|+++..|
T Consensus 75 ~~~~P~vV~vd~~N 88 (96)
T 1vc3_B 75 RNLKPTVVLVDERN 88 (96)
T ss_dssp TTCCCEEEEECTTC
T ss_pred hcCCCEEEEECCCC
Confidence 45688888887655
No 292
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=35.45 E-value=44 Score=28.92 Aligned_cols=50 Identities=4% Similarity=0.044 Sum_probs=40.6
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEEEec
Q 023191 181 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADM 230 (286)
Q Consensus 181 ~~d~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~vivD~ 230 (286)
..+.+++++.+......+|.+.....|.+.+..+|+++|+++|+.++.=+
T Consensus 251 ~~~~~~~~~~i~~~~~d~v~ik~~~~GGi~~~~~i~~~A~~~gi~~~~h~ 300 (371)
T 2ovl_A 251 LHTLYDFHNAVRAGSLTLPEPDVSNIGGYTTFRKVAALAEANNMLLTSHG 300 (371)
T ss_dssp CCSHHHHHHHHHHTCCSEECCCTTTTTSHHHHHHHHHHHHHTTCCEEECS
T ss_pred CCCHHHHHHHHHcCCCCEEeeCccccCCHHHHHHHHHHHHHcCCeEcccc
Confidence 45788899888774567777777778888899999999999999877743
No 293
>3on1_A BH2414 protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, unknown function; HET: MSE; 1.65A {Bacillus halodurans}
Probab=35.23 E-value=52 Score=22.58 Aligned_cols=43 Identities=12% Similarity=0.101 Sum_probs=29.7
Q ss_pred HHHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEEE
Q 023191 184 YDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLA 228 (286)
Q Consensus 184 ~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~viv 228 (286)
.++..+.++..+.++|++. ++.+. .-.+.|..+|++++++++.
T Consensus 23 ~~~v~kai~~gka~lViiA-~D~~~-~~~~~i~~~c~~~~ip~~~ 65 (101)
T 3on1_A 23 EEQVVKAVQNGQVTLVILS-SDAGI-HTKKKLLDKCGSYQIPVKV 65 (101)
T ss_dssp HHHHHHHHHTTCCSEEEEE-TTSCH-HHHHHHHHHHHHHTCCEEE
T ss_pred HHHHHHHHHcCCCcEEEEe-CCCCH-HHHHHHHHHHHHcCCCEEE
Confidence 4667778877678888884 22111 2366788899999997654
No 294
>3v7q_A Probable ribosomal protein YLXQ; L7AE superfamily, K-turn binding, K-turn RNA, hypothetical R protein, RNA binding protein; HET: CIT; 1.55A {Bacillus subtilis}
Probab=35.20 E-value=56 Score=22.47 Aligned_cols=43 Identities=19% Similarity=0.169 Sum_probs=29.6
Q ss_pred HHHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEEE
Q 023191 184 YDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLA 228 (286)
Q Consensus 184 ~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~viv 228 (286)
.+...+.++..+.++|++. ++.+. .-.++|..+|++++++++.
T Consensus 24 ~~~v~kai~~gka~lViiA-~D~~~-~~~~~i~~~c~~~~vp~~~ 66 (101)
T 3v7q_A 24 EDLVIKEIRNARAKLVLLT-EDASS-NTAKKVTDKCNYYKVPYKK 66 (101)
T ss_dssp HHHHHHHHHTTCCSEEEEE-TTSCH-HHHHHHHHHHHHTTCCEEE
T ss_pred hhhhHHHHhcCceeEEEEe-ccccc-cchhhhcccccccCCCeee
Confidence 4667788877688898884 22121 2366778889999997654
No 295
>1kko_A 3-methylaspartate ammonia-lyase; enolase superfamily, TIM barrel; 1.33A {Citrobacter amalonaticus} SCOP: c.1.11.2 d.54.1.1 PDB: 1kkr_A*
Probab=35.19 E-value=62 Score=28.53 Aligned_cols=50 Identities=8% Similarity=0.025 Sum_probs=41.5
Q ss_pred CCCCHHHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEEEe
Q 023191 180 GYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 229 (286)
Q Consensus 180 ~~~d~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~vivD 229 (286)
...+.+++++.+...-..+|.+.++..|.+.+..+++++|+++|+.+++=
T Consensus 309 ~~~~~~~~~~~i~~~a~d~i~ik~~~~GGitea~~i~~~A~~~gi~~~~~ 358 (413)
T 1kko_A 309 WCNTYQDIVDFTDAGSCHMVQIKTPDLGGIHNIVDAVLYCNKHGMEAYQG 358 (413)
T ss_dssp TCCSHHHHHHHHHTTCCSEEEECGGGGSSTHHHHHHHHHHHHHTCEEEEC
T ss_pred CCCCHHHHHHHHHhCCCCEEEeCccccCCHHHHHHHHHHHHHcCCeEEec
Confidence 55688999998877456788877777888889999999999999987764
No 296
>1tks_A 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, 3,4-dihydroxy-2-B 4-phosphate synthase, synthetic gene, ISO; 1.60A {Candida albicans} SCOP: d.115.1.2 PDB: 1tku_A* 2ris_A 2riu_A*
Probab=35.18 E-value=55 Score=25.96 Aligned_cols=34 Identities=6% Similarity=0.102 Sum_probs=27.2
Q ss_pred CCcEEEEcCC-C-CCCccCHHHHHHHHHhcCCEEEE
Q 023191 195 RPKLIVAGAS-A-YARLYDYERIRKVCNKQKAIMLA 228 (286)
Q Consensus 195 ~tk~v~i~~~-n-~g~~~~l~~I~~ia~~~~~~viv 228 (286)
+|.+|+..-- | .|......++.++|++||+.++.
T Consensus 159 ~Pa~vicEi~~~~dG~mar~~~l~~fA~~h~l~iit 194 (204)
T 1tks_A 159 QPAGVICELVRDEDGLMMRLDDCIQFGKKHGIKIIN 194 (204)
T ss_dssp CSBEEEEEBBCTTTCCBCBHHHHHHHHHHHTCCEEE
T ss_pred CceEEEEEEeECCCCCcCCHHHHHHHHHHcCCcEEE
Confidence 6777775533 4 68889999999999999998764
No 297
>3ghf_A Septum site-determining protein MINC; structural genomics, cell division, cell cycle, septation, PSI-2, protein structure initiative; HET: CIT; 2.20A {Salmonella typhimurium LT2}
Probab=35.13 E-value=82 Score=22.48 Aligned_cols=46 Identities=7% Similarity=0.174 Sum_probs=29.4
Q ss_pred CCHHHHHHHhhh--------cCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEE
Q 023191 182 IDYDQLEKSATL--------FRPKLIVAGASAYARLYDYERIRKVCNKQKAIML 227 (286)
Q Consensus 182 ~d~e~l~~~i~~--------~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~vi 227 (286)
.|++++.+.+.+ ++-.-|+++.+......++.+|.++++++|+.++
T Consensus 25 ~d~~~l~~~L~~ki~~aP~FF~~aPVVlDl~~l~~~~dl~~L~~~l~~~gl~~v 78 (120)
T 3ghf_A 25 AEPEVIRQALEDKIAQAPAFLKHAPVVINVSGLESPVNWPELHKIVTSTGLRII 78 (120)
T ss_dssp CCHHHHHHHHHHHHHHSHHHHTTCEEEEEEEECCSSCCHHHHHHHHHTTTCEEE
T ss_pred CCHHHHHHHHHHHHHhChHhhCCCcEEEEccccCChHHHHHHHHHHHHcCCEEE
Confidence 467666665543 1234566653332234689999999999998764
No 298
>3edf_A FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin complex, glycosidase, hydrolase; HET: CE6 ACX; 1.65A {Flavobacterium SP} PDB: 3edj_A* 3edk_A* 3ede_A 3edd_A* 1h3g_A
Probab=34.58 E-value=21 Score=33.32 Aligned_cols=25 Identities=16% Similarity=0.255 Sum_probs=21.7
Q ss_pred CCccCHHHHHHHHHhcCCEEEEecc
Q 023191 207 ARLYDYERIRKVCNKQKAIMLADMA 231 (286)
Q Consensus 207 g~~~~l~~I~~ia~~~~~~vivD~a 231 (286)
|+..+++++++-||++|+-||.|.+
T Consensus 196 Gt~~df~~Lv~~aH~~Gi~VilD~V 220 (601)
T 3edf_A 196 GSNEDFVRLSTEARKRGMGLIQDVV 220 (601)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCHHHHHHHHHHHHHcCCEEEEEEC
Confidence 3455689999999999999999998
No 299
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=34.37 E-value=71 Score=27.05 Aligned_cols=58 Identities=14% Similarity=0.148 Sum_probs=36.9
Q ss_pred EecccCCCCCCCCHHHHHHHhhh---cCCcEEEEcCCC--CC--CccCHHHHHHHHHhc---CCEEEEe
Q 023191 171 MPYRLNESTGYIDYDQLEKSATL---FRPKLIVAGASA--YA--RLYDYERIRKVCNKQ---KAIMLAD 229 (286)
Q Consensus 171 v~~~~~~~~~~~d~e~l~~~i~~---~~tk~v~i~~~n--~g--~~~~l~~I~~ia~~~---~~~vivD 229 (286)
+..+++ +++.+|++.+++.++. .....|+++.++ .. +..+..++.+.+.+. .+.||+=
T Consensus 30 lvTPf~-~dg~iD~~~l~~li~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaG 97 (315)
T 3si9_A 30 LITPFD-DNGAIDEKAFCNFVEWQITQGINGVSPVGTTGESPTLTHEEHKRIIELCVEQVAKRVPVVAG 97 (315)
T ss_dssp CCCCBC-TTSCBCHHHHHHHHHHHHHTTCSEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCBEEE
T ss_pred eECCCC-CCCCcCHHHHHHHHHHHHHcCCCEEEeCccccCccccCHHHHHHHHHHHHHHhCCCCcEEEe
Confidence 333555 5689999999987652 367888876443 22 344555677776553 4677763
No 300
>1jae_A Alpha-amylase; glycosidase, carbohydrate metabolism, 4-glucan-4-glucanohydrolase, hydrolase; 1.65A {Tenebrio molitor} SCOP: b.71.1.1 c.1.8.1 PDB: 1clv_A 1tmq_A 1viw_A*
Probab=34.15 E-value=15 Score=33.09 Aligned_cols=26 Identities=12% Similarity=0.257 Sum_probs=22.8
Q ss_pred CCCccCHHHHHHHHHhcCCEEEEecc
Q 023191 206 YARLYDYERIRKVCNKQKAIMLADMA 231 (286)
Q Consensus 206 ~g~~~~l~~I~~ia~~~~~~vivD~a 231 (286)
+|+..+++++++-||++|+-||.|.+
T Consensus 71 ~Gt~~d~~~lv~~~h~~Gi~VilD~V 96 (471)
T 1jae_A 71 SGDESAFTDMTRRCNDAGVRIYVDAV 96 (471)
T ss_dssp TEEHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 45566799999999999999999987
No 301
>3dhu_A Alpha-amylase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum}
Probab=34.14 E-value=19 Score=32.11 Aligned_cols=25 Identities=12% Similarity=0.288 Sum_probs=21.7
Q ss_pred CCccCHHHHHHHHHhcCCEEEEecc
Q 023191 207 ARLYDYERIRKVCNKQKAIMLADMA 231 (286)
Q Consensus 207 g~~~~l~~I~~ia~~~~~~vivD~a 231 (286)
|+..+++++++-||++|+-||+|.+
T Consensus 81 Gt~~~~~~lv~~~h~~Gi~vi~D~V 105 (449)
T 3dhu_A 81 GTLADFKALTDRAHELGMKVMLDIV 105 (449)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEEc
Confidence 4456788999999999999999987
No 302
>3qtp_A Enolase 1; glycolysis, lyase; HET: 2PG; 1.90A {Entamoeba histolytica}
Probab=33.95 E-value=74 Score=28.47 Aligned_cols=48 Identities=6% Similarity=0.009 Sum_probs=36.5
Q ss_pred CCHHHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEEEe
Q 023191 182 IDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 229 (286)
Q Consensus 182 ~d~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~vivD 229 (286)
-+++++++.+...-..+|.+-....|.+.+.-+++++|+++|+.+++=
T Consensus 332 Tn~~~i~~~Ie~~a~n~IlIKvnqiGGITEalkaa~lA~~~G~~vmvs 379 (441)
T 3qtp_A 332 TNPARVQMAMDKNACNSVLIKVNQIGTLTETFKTIKMAQEKGWGVMAS 379 (441)
T ss_dssp TCHHHHHHHHHHTCCSEEEECGGGTCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred cCHHHHHHHHHcCCCCEEEecccccccHHHHHHHHHHHHHcCCeEEEe
Confidence 357777777766345667666666788888889999999999987753
No 303
>2dh2_A 4F2 cell-surface antigen heavy chain; TIM-barrel, glycosidase like, antiparallel beta-sheet, greek terminal domain, extracellular domain; 2.10A {Homo sapiens} PDB: 2dh3_A
Probab=33.93 E-value=20 Score=31.81 Aligned_cols=26 Identities=12% Similarity=0.363 Sum_probs=21.8
Q ss_pred CCCccCHHHHHHHHHhcCCEEEEecc
Q 023191 206 YARLYDYERIRKVCNKQKAIMLADMA 231 (286)
Q Consensus 206 ~g~~~~l~~I~~ia~~~~~~vivD~a 231 (286)
+|+..+++++++-||++|+-||.|.+
T Consensus 78 ~Gt~~d~~~lv~~ah~~Gi~vilD~V 103 (424)
T 2dh2_A 78 FGSKEDFDSLLQSAKKKSIRVILDLT 103 (424)
T ss_dssp GCCHHHHHHHHHHHHHTTCEEEEECC
T ss_pred CCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 45666788999999999999999987
No 304
>2xw6_A MGS, methylglyoxal synthase; lyase; 1.08A {Thermus SP} PDB: 2x8w_A 1wo8_A
Probab=33.60 E-value=55 Score=24.04 Aligned_cols=46 Identities=11% Similarity=0.060 Sum_probs=34.2
Q ss_pred HHHHHhhhcCCcEEEEcCC--CCCC-ccCHHHHHHHHHhcCCEEEEecc
Q 023191 186 QLEKSATLFRPKLIVAGAS--AYAR-LYDYERIRKVCNKQKAIMLADMA 231 (286)
Q Consensus 186 ~l~~~i~~~~tk~v~i~~~--n~g~-~~~l~~I~~ia~~~~~~vivD~a 231 (286)
++.++|.+.+..+|+..+. +-.. ..+...|.+.|-+|+++++.--+
T Consensus 65 ~I~d~I~~geIdlVInt~~pl~~~~h~~D~~~IrR~A~~~~IP~~T~la 113 (134)
T 2xw6_A 65 QMGARVAEGRILAVIFFRDPLTAQPHEPDVQALLRVCDVHGVPLATNPM 113 (134)
T ss_dssp HHHHHHHTTCEEEEEEECCTTTCCTTSCCSHHHHHHHHHHTCCEECSHH
T ss_pred hHHHHHHCCCccEEEEccCcccCCCccchHHHHHHHHHHcCCCeEcCHH
Confidence 5677777757777776544 4223 56899999999999999987665
No 305
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=33.53 E-value=1.2e+02 Score=25.47 Aligned_cols=60 Identities=15% Similarity=0.133 Sum_probs=37.9
Q ss_pred EecccCCCCCCCCHHHHHHHhh---hcCCcEEEEcCCC--CC--CccCHHHHHHHHHhc---CCEEEEecc
Q 023191 171 MPYRLNESTGYIDYDQLEKSAT---LFRPKLIVAGASA--YA--RLYDYERIRKVCNKQ---KAIMLADMA 231 (286)
Q Consensus 171 v~~~~~~~~~~~d~e~l~~~i~---~~~tk~v~i~~~n--~g--~~~~l~~I~~ia~~~---~~~vivD~a 231 (286)
+..+++ +++.+|.+.+++.++ +.....|+++.++ .. +..+..++.+.+.+. .++||+=..
T Consensus 24 ~vTPf~-~dg~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg 93 (304)
T 3cpr_A 24 MVTPFT-ESGDIDIAAGREVAAYLVDKGLDSLVLAGTTGESPTTTAAEKLELLKAVREEVGDRAKLIAGVG 93 (304)
T ss_dssp CCCCBC-TTSCBCHHHHHHHHHHHHHTTCCEEEESSTTTTTTTSCHHHHHHHHHHHHHHHTTTSEEEEECC
T ss_pred eeccCC-CCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEecCC
Confidence 333455 568999999988775 2367888886443 22 344555667766553 477876443
No 306
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=33.11 E-value=1e+02 Score=25.73 Aligned_cols=56 Identities=14% Similarity=0.158 Sum_probs=35.7
Q ss_pred ccCCCCCCCCHHHHHHHhh---hcCCcEEEEcCCC--CC--CccCHHHHHHHHHhc---CCEEEEec
Q 023191 174 RLNESTGYIDYDQLEKSAT---LFRPKLIVAGASA--YA--RLYDYERIRKVCNKQ---KAIMLADM 230 (286)
Q Consensus 174 ~~~~~~~~~d~e~l~~~i~---~~~tk~v~i~~~n--~g--~~~~l~~I~~ia~~~---~~~vivD~ 230 (286)
+++ +++.+|.+.+++.++ +.....|+++.++ .. +..+-.++.+.+.+. .++||+=.
T Consensus 23 Pf~-~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGv 88 (301)
T 1xky_A 23 PFD-INGNIDFAKTTKLVNYLIDNGTTAIVVGGTTGESPTLTSEEKVALYRHVVSVVDKRVPVIAGT 88 (301)
T ss_dssp CBC-TTSSBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEC
T ss_pred cCC-CCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCceEEeCC
Confidence 455 568999999988765 2367888886443 22 344555666666543 46777543
No 307
>1wuf_A Hypothetical protein LIN2664; structural genomics, unknown function, nysgxrc target T2186, superfamily, protein structure initiative, PSI; 2.90A {Listeria innocua} SCOP: c.1.11.2 d.54.1.1
Probab=32.86 E-value=75 Score=27.72 Aligned_cols=49 Identities=8% Similarity=0.114 Sum_probs=39.7
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEEEe
Q 023191 181 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 229 (286)
Q Consensus 181 ~~d~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~vivD 229 (286)
..+.+++++.+......+|.+.+...|.+.+..+|+++|+++|+.+++=
T Consensus 261 ~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~~~~ia~~A~~~gi~~~~~ 309 (393)
T 1wuf_A 261 IRSVKDVEQAHSIGSCRAINLKLARVGGMSSALKIAEYCALNEILVWCG 309 (393)
T ss_dssp CCSHHHHHHHHHHTCCSEEEECTGGGTSHHHHHHHHHHHHHTTCEEEEC
T ss_pred cCCHHHHHHHHHhCCCCEEEeChhhhCCHHHHHHHHHHHHHcCCeEEec
Confidence 3577888888876346788877777888888999999999999988764
No 308
>1zja_A Trehalulose synthase; sucrose isomerase, alpha-amylase family, (beta/alpha)8 barrel; 1.60A {Pseudomonas mesoacidophila} PDB: 1zjb_A 2pwd_A* 2pwh_A 2pwg_A 2pwe_A* 2pwf_A* 3gbe_A* 3gbd_A*
Probab=32.86 E-value=23 Score=32.60 Aligned_cols=25 Identities=16% Similarity=0.379 Sum_probs=21.6
Q ss_pred CCccCHHHHHHHHHhcCCEEEEecc
Q 023191 207 ARLYDYERIRKVCNKQKAIMLADMA 231 (286)
Q Consensus 207 g~~~~l~~I~~ia~~~~~~vivD~a 231 (286)
|+..+++++++-||++|+-||.|.+
T Consensus 77 Gt~~df~~Lv~~aH~~Gi~VilD~V 101 (557)
T 1zja_A 77 GTMEDFDRLMAELKKRGMRLMVDVV 101 (557)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 4455688999999999999999988
No 309
>1cyg_A Cyclodextrin glucanotransferase; glycosyltransferase; 2.50A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1
Probab=32.74 E-value=23 Score=33.58 Aligned_cols=28 Identities=18% Similarity=0.409 Sum_probs=24.8
Q ss_pred CCCCCccCHHHHHHHHHhcCCEEEEecc
Q 023191 204 SAYARLYDYERIRKVCNKQKAIMLADMA 231 (286)
Q Consensus 204 ~n~g~~~~l~~I~~ia~~~~~~vivD~a 231 (286)
+.+|+..+++++++-||++|+-||.|.+
T Consensus 106 p~~Gt~~df~~Lv~~aH~~GIkVilD~V 133 (680)
T 1cyg_A 106 PFFGTLSDFQRLVDAAHAKGIKVIIDFA 133 (680)
T ss_dssp TTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cccCCHHHHHHHHHHHHHCCCEEEEEeC
Confidence 4467788899999999999999999988
No 310
>1g57_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavine biosynthesis, skeletal rearrangement, antimicrobial target; 1.40A {Escherichia coli} SCOP: d.115.1.2 PDB: 1g58_A 1iez_A 3ls6_A 3lrj_A 3lqu_A 3h07_A
Probab=32.70 E-value=88 Score=25.01 Aligned_cols=34 Identities=9% Similarity=0.165 Sum_probs=26.7
Q ss_pred CCcEEEEcCCC-CCCccCHHHHHHHHHhcCCEEEE
Q 023191 195 RPKLIVAGASA-YARLYDYERIRKVCNKQKAIMLA 228 (286)
Q Consensus 195 ~tk~v~i~~~n-~g~~~~l~~I~~ia~~~~~~viv 228 (286)
.|.+|+..-.| -|......++.++|++|++.++.
T Consensus 167 ~Pa~vicEi~~~dG~mar~~~l~~fA~~h~l~~it 201 (217)
T 1g57_A 167 KPAGVLCELTNDDGTMARAPECIEFANKHNMALVT 201 (217)
T ss_dssp CSCEEEEEBBCTTSSBCCHHHHHHHHHHTTCEEEE
T ss_pred CceEEEEEEeCCCCCccCHHHHHHHHHHcCCCEEE
Confidence 67777654334 57888999999999999988764
No 311
>3b1s_B Flagellar biosynthetic protein FLHB; type III secretion system, protein transport, MEMB protein; 2.55A {Aquifex aeolicus}
Probab=38.85 E-value=9.3 Score=25.96 Aligned_cols=20 Identities=5% Similarity=0.112 Sum_probs=17.7
Q ss_pred HHHHHHHHHhcCCEEEEecc
Q 023191 212 YERIRKVCNKQKAIMLADMA 231 (286)
Q Consensus 212 l~~I~~ia~~~~~~vivD~a 231 (286)
-++|.++|++||++++.|-.
T Consensus 29 A~~I~e~A~e~~VPi~e~~~ 48 (87)
T 3b1s_B 29 AQKIVEIAENYSIPVVRKPE 48 (87)
Confidence 46889999999999999975
No 312
>2wc7_A Alpha amylase, catalytic region; CD/PUL-hydrolyzing enzymes, hydrolase, glycosidase, neopullu; 2.37A {Nostoc punctiforme} PDB: 2wcs_A 2wkg_A
Probab=32.57 E-value=17 Score=32.86 Aligned_cols=26 Identities=4% Similarity=0.098 Sum_probs=22.3
Q ss_pred CCCccCHHHHHHHHHhcCCEEEEecc
Q 023191 206 YARLYDYERIRKVCNKQKAIMLADMA 231 (286)
Q Consensus 206 ~g~~~~l~~I~~ia~~~~~~vivD~a 231 (286)
+|+..+++++++-||++|+-||.|.+
T Consensus 99 ~Gt~~df~~Lv~~aH~~Gi~VilD~V 124 (488)
T 2wc7_A 99 LGGNEAFKELLDAAHQRNIKVVLDGV 124 (488)
T ss_dssp GTHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cCCHHHHHHHHHHHHHCCCEEEEEeC
Confidence 45566789999999999999999987
No 313
>1qho_A Alpha-amylase; glycoside hydrolase, starch degradation; HET: MAL ABD; 1.70A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1qhp_A*
Probab=32.48 E-value=24 Score=33.58 Aligned_cols=28 Identities=4% Similarity=0.237 Sum_probs=24.6
Q ss_pred CCCCCccCHHHHHHHHHhcCCEEEEecc
Q 023191 204 SAYARLYDYERIRKVCNKQKAIMLADMA 231 (286)
Q Consensus 204 ~n~g~~~~l~~I~~ia~~~~~~vivD~a 231 (286)
+.+|+..+++++++-||++|+-||.|.+
T Consensus 102 p~~Gt~~df~~Lv~~aH~~GikVilD~V 129 (686)
T 1qho_A 102 EHFGNWTTFDTLVNDAHQNGIKVIVDFV 129 (686)
T ss_dssp TTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cccCCHHHHHHHHHHHHHCCCEEEEEec
Confidence 3466777899999999999999999988
No 314
>1vmd_A MGS, methylglyoxal synthase; TM1185, structural genomics, JCSG, P structure initiative, PSI, joint center for structural GENO lyase; 2.06A {Thermotoga maritima} SCOP: c.24.1.2
Probab=32.47 E-value=90 Score=24.13 Aligned_cols=46 Identities=4% Similarity=-0.086 Sum_probs=35.1
Q ss_pred HHHHHhhhcCCcEEEEcCC--CCCC-ccCHHHHHHHHHhcCCEEEEecc
Q 023191 186 QLEKSATLFRPKLIVAGAS--AYAR-LYDYERIRKVCNKQKAIMLADMA 231 (286)
Q Consensus 186 ~l~~~i~~~~tk~v~i~~~--n~g~-~~~l~~I~~ia~~~~~~vivD~a 231 (286)
++.++|.+.+..+|+..+. +-.. ..+...|.+.|-.|+++++.--+
T Consensus 89 qI~d~I~~geIdlVInt~dPl~~~~h~~D~~~IRR~A~~~~IP~~Tnla 137 (178)
T 1vmd_A 89 QIGAMIAEGKIDVLIFFWDPLEPQAHDVDVKALIRIATVYNIPVAITRS 137 (178)
T ss_dssp HHHHHHHTTSCCEEEEECCSSSCCTTSCCHHHHHHHHHHTTCCEESSHH
T ss_pred hHHHHHHCCCccEEEEccCccCCCcccccHHHHHHHHHHcCCCEEeCHH
Confidence 5777787767888877644 4223 56899999999999999987665
No 315
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=32.29 E-value=1.3e+02 Score=25.28 Aligned_cols=59 Identities=12% Similarity=0.064 Sum_probs=38.0
Q ss_pred EecccCCCCCCCCHHHHHHHhhh---cCCcEEEEcCCC--CC--CccCHHHHHHHHHhc---CCEEEEec
Q 023191 171 MPYRLNESTGYIDYDQLEKSATL---FRPKLIVAGASA--YA--RLYDYERIRKVCNKQ---KAIMLADM 230 (286)
Q Consensus 171 v~~~~~~~~~~~d~e~l~~~i~~---~~tk~v~i~~~n--~g--~~~~l~~I~~ia~~~---~~~vivD~ 230 (286)
+..+++ +++.+|++.+++.++. .....|+++.++ .. +..+..++.+.+.+. .+.||+=.
T Consensus 23 ~vTPf~-~dg~iD~~~l~~lv~~li~~Gv~gi~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGv 91 (304)
T 3l21_A 23 MVTPFS-GDGSLDTATAARLANHLVDQGCDGLVVSGTTGESPTTTDGEKIELLRAVLEAVGDRARVIAGA 91 (304)
T ss_dssp CCCCBC-TTSCBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEEC
T ss_pred EECCCC-CCCCcCHHHHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEeC
Confidence 333455 5689999999987752 367888886443 22 344556677776553 57888743
No 316
>3plx_B Aspartate 1-decarboxylase; structural genomics, center for structural genomics of infec diseases, csgid, double-PSI beta-barrel; 1.75A {Campylobacter jejuni subsp}
Probab=32.21 E-value=92 Score=21.64 Aligned_cols=13 Identities=23% Similarity=0.641 Sum_probs=9.9
Q ss_pred hcCCcEEEEcCCC
Q 023191 193 LFRPKLIVAGASA 205 (286)
Q Consensus 193 ~~~tk~v~i~~~n 205 (286)
.++|++|+++..|
T Consensus 75 ~~~P~vv~vd~~N 87 (102)
T 3plx_B 75 TFKPKVVFVDENN 87 (102)
T ss_dssp HCCCEEEEECTTS
T ss_pred cCCCEEEEECCCC
Confidence 4689999887655
No 317
>1chr_A Chloromuconate cycloisomerase; 3.00A {Ralstonia eutropha} PDB: 2chr_A
Probab=32.20 E-value=79 Score=27.27 Aligned_cols=50 Identities=6% Similarity=-0.078 Sum_probs=40.9
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEEEec
Q 023191 181 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADM 230 (286)
Q Consensus 181 ~~d~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~vivD~ 230 (286)
..+.+++++.+......+|.+.+...|.+.+..+|+++|+++|+.++.=+
T Consensus 248 ~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~i~~~A~~~g~~~~~~~ 297 (370)
T 1chr_A 248 LSTLASAFDLARDRSVDVFSLKLCNMGGVSATQKIAAVAEASGIASYGGT 297 (370)
T ss_dssp CCSHHHHHHHHTTTSCSEEEECTTTSCSHHHHHHHHHHHHHHTCEEEECC
T ss_pred cCCHHHHHHHHHcCCCCEEEECccccCCHHHHHHHHHHHHHcCCeEEecC
Confidence 45788888888764577888888888988999999999999999887543
No 318
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=32.04 E-value=1.2e+02 Score=25.54 Aligned_cols=62 Identities=11% Similarity=0.048 Sum_probs=0.0
Q ss_pred eeeEEEecccCCCCCCCCHHHHHHHhh---hcCCcEEEEcCCC----CCCccCHHHHHHHHHhc--CCEEEE
Q 023191 166 IFFETMPYRLNESTGYIDYDQLEKSAT---LFRPKLIVAGASA----YARLYDYERIRKVCNKQ--KAIMLA 228 (286)
Q Consensus 166 ~~~~~v~~~~~~~~~~~d~e~l~~~i~---~~~tk~v~i~~~n----~g~~~~l~~I~~ia~~~--~~~viv 228 (286)
+.+..+..+++ +++.+|++.+++.++ +.....|+++.++ +-+..+..++.+.+.+. .+.||+
T Consensus 11 Gv~~a~vTPf~-~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Lt~~Er~~v~~~~v~~~grvpVia 81 (313)
T 3dz1_A 11 GTFAIAPTPFH-DDGKIDDVSIDRLTDFYAEVGCEGVTVLGILGEAPKLDAAEAEAVATRFIKRAKSMQVIV 81 (313)
T ss_dssp EEEEECCCCBC-TTSCBCHHHHHHHHHHHHHTTCSEEEESTGGGTGGGSCHHHHHHHHHHHHHHCTTSEEEE
T ss_pred eEEEEeeCCCC-CCCCcCHHHHHHHHHHHHHCCCCEEEeCccCcChhhCCHHHHHHHHHHHHHHcCCCcEEE
No 319
>1d3c_A Cyclodextrin glycosyltransferase; alpha-amylase, product complex, oligosaccharide, family 13 glycosyl hydrolase, transglycosylation; HET: GLC; 1.78A {Bacillus circulans} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1cxf_A* 1cxk_A* 1cdg_A* 1cxe_A* 1cxh_A* 1cxi_A* 2cxg_A* 1cgv_A* 2dij_A* 1cgy_A* 1kck_A* 1cgx_A* 1cxl_A* 1cgw_A* 1tcm_A 1kcl_A* 1eo5_A* 1eo7_A* 1dtu_A* 1ot1_A* ...
Probab=32.02 E-value=24 Score=33.49 Aligned_cols=28 Identities=18% Similarity=0.434 Sum_probs=24.9
Q ss_pred CCCCCccCHHHHHHHHHhcCCEEEEecc
Q 023191 204 SAYARLYDYERIRKVCNKQKAIMLADMA 231 (286)
Q Consensus 204 ~n~g~~~~l~~I~~ia~~~~~~vivD~a 231 (286)
+.+|+..+++++++-||++|+-||.|.+
T Consensus 110 p~~Gt~~dfk~Lv~~aH~~GI~VilD~V 137 (686)
T 1d3c_A 110 PAYGTIADFQNLIAAAHAKNIKVIIDFA 137 (686)
T ss_dssp TTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cccCCHHHHHHHHHHHHHCCCEEEEEeC
Confidence 4467788899999999999999999988
No 320
>1ua7_A Alpha-amylase; beta-alpha-barrels, acarbose, greek-KEY motif, hydrolase; HET: ACI GLD GLC G6D BGC; 2.21A {Bacillus subtilis} SCOP: b.71.1.1 c.1.8.1 PDB: 1bag_A* 3dc0_A
Probab=31.97 E-value=19 Score=31.92 Aligned_cols=27 Identities=4% Similarity=0.107 Sum_probs=23.0
Q ss_pred CCCCccCHHHHHHHHHhcCCEEEEecc
Q 023191 205 AYARLYDYERIRKVCNKQKAIMLADMA 231 (286)
Q Consensus 205 n~g~~~~l~~I~~ia~~~~~~vivD~a 231 (286)
.+|+..+++++++-||++|+-||.|.+
T Consensus 70 ~~G~~~d~~~lv~~~h~~Gi~VilD~V 96 (422)
T 1ua7_A 70 YLGTEQEFKEMCAAAEEYGIKVIVDAV 96 (422)
T ss_dssp TTEEHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred CCCCHHHHHHHHHHHHHCCCEEEEEec
Confidence 356777889999999999999999987
No 321
>3iz5_f 60S ribosomal protein L30 (L30E); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_f
Probab=31.95 E-value=70 Score=22.55 Aligned_cols=43 Identities=16% Similarity=0.096 Sum_probs=30.6
Q ss_pred HHHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEEE
Q 023191 184 YDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLA 228 (286)
Q Consensus 184 ~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~viv 228 (286)
.++..+.++..+.++|++. .+.+. .-.++|..+|+.+++.++.
T Consensus 31 ~~~t~kai~~gkakLVilA-~D~~~-~~~~~i~~~c~~~~ipv~~ 73 (112)
T 3iz5_f 31 YKTVLKTLRSSLGKLIILA-NNCPP-LRKSEIETYAMLAKISVHH 73 (112)
T ss_dssp HHHHHHHHHTTCCSEEEEC-SCCCH-HHHHHHHHHHHHTTCCEEC
T ss_pred HHHHHHHHHcCCceEEEEe-CCCCH-HHHHHHHHHHHHcCCcEEE
Confidence 4567777877688999884 22221 2367888899999998774
No 322
>1w6t_A Enolase; bacterial infection, surface protein, moonlighting protein, glycolysis, phosphopyruvate hydratase, lyase; HET: 2PE; 2.10A {Streptococcus pneumoniae} SCOP: c.1.11.1 d.54.1.1 PDB: 1iyx_A
Probab=31.87 E-value=44 Score=29.91 Aligned_cols=49 Identities=8% Similarity=0.014 Sum_probs=36.2
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEEEe
Q 023191 181 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 229 (286)
Q Consensus 181 ~~d~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~vivD 229 (286)
..+..++++.+...-..+|.+.....|.+.+..+|+++|+++|+.+++-
T Consensus 332 ~~~~~~~~~~i~~~a~d~i~ik~~~~GGitea~~ia~lA~~~g~~v~~~ 380 (444)
T 1w6t_A 332 VTNTDYLARGIQEGAANSILIKVNQIGTLTETFEAIEMAKEAGYTAVVS 380 (444)
T ss_dssp TTCHHHHHHHHHHTCCSEEEECHHHHCSHHHHHHHHHHHHHTTCEEEEE
T ss_pred cCCHHHHHHHHHcCCCCEEEEcccccCCHHHHHHHHHHHHHCCCeEEec
Confidence 4566777777765345666666555777888889999999999998873
No 323
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=31.63 E-value=89 Score=25.97 Aligned_cols=58 Identities=12% Similarity=0.127 Sum_probs=39.1
Q ss_pred CCC-CCHHHHHHHhh----hcCCcEEEEc--C---CCCC-CccCHHHHHHHHHhcCCEEEEeccccccc
Q 023191 179 TGY-IDYDQLEKSAT----LFRPKLIVAG--A---SAYA-RLYDYERIRKVCNKQKAIMLADMAHISGL 236 (286)
Q Consensus 179 ~~~-~d~e~l~~~i~----~~~tk~v~i~--~---~n~g-~~~~l~~I~~ia~~~~~~vivD~a~~~g~ 236 (286)
++. .++++++.++. ..++.++++. . ++++ ...++..|..+.+..++.|+.|..|+.|.
T Consensus 152 ~G~~~t~~ei~~Ave~i~~~Gn~~i~L~~Rg~~~yp~y~~~~vdl~~i~~lk~~~~lpVi~dssH~~g~ 220 (276)
T 1vs1_A 152 RGFGNTVEELLAAAEYILLEGNWQVVLVERGIRTFEPSTRFTLDVAAVAVLKEATHLPVIVDPSHPAGR 220 (276)
T ss_dssp CCTTCCHHHHHHHHHHHHHTTCCCEEEEECCBCCSCCSSSSBCBHHHHHHHHHHBSSCEEECCHHHHCS
T ss_pred CCCCCCHHHHHHHHHHHHHcCCCeEEEEeCCcCCCCCcCcchhCHHHHHHHHHHhCCCEEEeCCCCCCc
Confidence 344 48888877654 2255776653 2 2322 44578888887777799999999999773
No 324
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=31.60 E-value=1.5e+02 Score=24.74 Aligned_cols=56 Identities=14% Similarity=0.194 Sum_probs=36.4
Q ss_pred ccCCCCCCCCHHHHHHHhh---hcCCcEEEEcCCC--CC--CccCHHHHHHHHHhc---CCEEEEec
Q 023191 174 RLNESTGYIDYDQLEKSAT---LFRPKLIVAGASA--YA--RLYDYERIRKVCNKQ---KAIMLADM 230 (286)
Q Consensus 174 ~~~~~~~~~d~e~l~~~i~---~~~tk~v~i~~~n--~g--~~~~l~~I~~ia~~~---~~~vivD~ 230 (286)
+++ +++.+|++.+++.++ +.....|+++.++ .. +..+..++.+.+.+. .+.||+=.
T Consensus 22 PF~-~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGv 87 (303)
T 2wkj_A 22 PFD-QQQALDKASLRRLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAKGKIKLIAHV 87 (303)
T ss_dssp CBC-TTSSBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEEC
T ss_pred CCC-CCCCcCHHHHHHHHHHHHHcCCCEEEECeeccChhhCCHHHHHHHHHHHHHHhCCCCcEEEec
Confidence 455 568999999988765 2367888886443 22 344555666766553 57888743
No 325
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=31.45 E-value=68 Score=22.96 Aligned_cols=36 Identities=11% Similarity=0.211 Sum_probs=26.0
Q ss_pred HHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEE
Q 023191 186 QLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIML 227 (286)
Q Consensus 186 ~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~vi 227 (286)
.+++.... .+|.|++++ |.. -+++.++|+++|+-++
T Consensus 74 ~v~e~~~~-g~k~v~~~~---G~~--~~e~~~~a~~~Girvv 109 (122)
T 3ff4_A 74 EYNYILSL-KPKRVIFNP---GTE--NEELEEILSENGIEPV 109 (122)
T ss_dssp GHHHHHHH-CCSEEEECT---TCC--CHHHHHHHHHTTCEEE
T ss_pred HHHHHHhc-CCCEEEECC---CCC--hHHHHHHHHHcCCeEE
Confidence 35555555 788888863 222 3799999999999887
No 326
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=31.26 E-value=1.2e+02 Score=25.31 Aligned_cols=56 Identities=21% Similarity=0.236 Sum_probs=36.1
Q ss_pred cccCCCCCCCCHHHHHHHhhh---cCCcEEEEcCCC--CC--CccCHHHHHHHHHhc---CCEEEEe
Q 023191 173 YRLNESTGYIDYDQLEKSATL---FRPKLIVAGASA--YA--RLYDYERIRKVCNKQ---KAIMLAD 229 (286)
Q Consensus 173 ~~~~~~~~~~d~e~l~~~i~~---~~tk~v~i~~~n--~g--~~~~l~~I~~ia~~~---~~~vivD 229 (286)
.+++ +++.+|++.+++.++. .....++++.++ .. +..+..++.+.+.+. .+.||+=
T Consensus 17 TPf~-~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaG 82 (297)
T 3flu_A 17 TPMN-QDGSIHYEQLRDLIDWHIENGTDGIVAVGTTGESATLSVEEHTAVIEAVVKHVAKRVPVIAG 82 (297)
T ss_dssp CCBC-TTSCBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEE
T ss_pred ccCC-CCCCcCHHHHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEe
Confidence 3455 5689999999987652 367888886443 22 344555677766553 4677773
No 327
>3bc9_A AMYB, alpha amylase, catalytic region; acarbose, thermostable, halophilic, N domain, starch binding, hydrolase; HET: G6D GLC ACI BGC ACR; 1.35A {Halothermothrix orenii} PDB: 3bcd_A* 3bcf_A
Probab=31.20 E-value=25 Score=32.92 Aligned_cols=26 Identities=12% Similarity=0.107 Sum_probs=22.4
Q ss_pred CCCccCHHHHHHHHHhcCCEEEEecc
Q 023191 206 YARLYDYERIRKVCNKQKAIMLADMA 231 (286)
Q Consensus 206 ~g~~~~l~~I~~ia~~~~~~vivD~a 231 (286)
+|+..+++++++-||++|+-||.|.+
T Consensus 205 ~Gt~~dfk~Lv~~aH~~GI~VilD~V 230 (599)
T 3bc9_A 205 YGTKGELENAIDALHNNDIKVYFDAV 230 (599)
T ss_dssp TBCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 34556689999999999999999987
No 328
>3bmv_A Cyclomaltodextrin glucanotransferase; glycosidase, thermostable, family 13 glycosyl hydrolas; 1.60A {Thermoanaerobacterium thermosulfurigenorganism_taxid} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 3bmw_A* 1ciu_A 1a47_A 1pj9_A* 1cgt_A
Probab=31.13 E-value=26 Score=33.31 Aligned_cols=28 Identities=11% Similarity=0.351 Sum_probs=24.9
Q ss_pred CCCCCccCHHHHHHHHHhcCCEEEEecc
Q 023191 204 SAYARLYDYERIRKVCNKQKAIMLADMA 231 (286)
Q Consensus 204 ~n~g~~~~l~~I~~ia~~~~~~vivD~a 231 (286)
+.+|+..+++++++-||++|+-||.|.+
T Consensus 111 p~~Gt~~dfk~Lv~~aH~~GikVilD~V 138 (683)
T 3bmv_A 111 PYFGSFTDFQNLINTAHAHNIKVIIDFA 138 (683)
T ss_dssp TTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cccCCHHHHHHHHHHHHHCCCEEEEEEc
Confidence 4467778899999999999999999988
No 329
>1m53_A Isomaltulose synthase; klebsiella SP. LX3, sucrose isomerization, isomerase; 2.20A {Klebsiella SP} SCOP: b.71.1.1 c.1.8.1
Probab=31.12 E-value=22 Score=32.89 Aligned_cols=25 Identities=12% Similarity=0.331 Sum_probs=21.4
Q ss_pred CCccCHHHHHHHHHhcCCEEEEecc
Q 023191 207 ARLYDYERIRKVCNKQKAIMLADMA 231 (286)
Q Consensus 207 g~~~~l~~I~~ia~~~~~~vivD~a 231 (286)
|+..+++++++-||++|+-||.|.+
T Consensus 90 Gt~~df~~lv~~aH~~Gi~VilD~V 114 (570)
T 1m53_A 90 GTMEDFDSLVAEMKKRNMRLMIDVV 114 (570)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 4455688999999999999999988
No 330
>3aj7_A Oligo-1,6-glucosidase; (beta/alpha)8-barrel, hydrolase; 1.30A {Saccharomyces cerevisiae} PDB: 3a4a_A* 3a47_A 3axi_A* 3axh_A*
Probab=30.87 E-value=26 Score=32.57 Aligned_cols=25 Identities=12% Similarity=0.072 Sum_probs=21.5
Q ss_pred CCccCHHHHHHHHHhcCCEEEEecc
Q 023191 207 ARLYDYERIRKVCNKQKAIMLADMA 231 (286)
Q Consensus 207 g~~~~l~~I~~ia~~~~~~vivD~a 231 (286)
|+..+++++++-||++|+-||.|.+
T Consensus 85 Gt~~df~~lv~~~h~~Gi~VilD~V 109 (589)
T 3aj7_A 85 GTNEDCFALIEKTHKLGMKFITDLV 109 (589)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEec
Confidence 3455688999999999999999988
No 331
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=30.87 E-value=80 Score=26.72 Aligned_cols=58 Identities=14% Similarity=0.066 Sum_probs=37.0
Q ss_pred EecccCCCCCCCCHHHHHHHhhh---cCCcEEEEcCCC--CC--CccCHHHHHHHHHhc---CCEEEEe
Q 023191 171 MPYRLNESTGYIDYDQLEKSATL---FRPKLIVAGASA--YA--RLYDYERIRKVCNKQ---KAIMLAD 229 (286)
Q Consensus 171 v~~~~~~~~~~~d~e~l~~~i~~---~~tk~v~i~~~n--~g--~~~~l~~I~~ia~~~---~~~vivD 229 (286)
+..+++ +++.+|++.+++.++. .....|+++.++ .. +..+..++.+.+.+. .+.||+=
T Consensus 32 ~vTPf~-~dg~iD~~~l~~lv~~li~~Gv~Gi~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaG 99 (315)
T 3na8_A 32 TITPFA-ADGGLDLPALGRSIERLIDGGVHAIAPLGSTGEGAYLSDPEWDEVVDFTLKTVAHRVPTIVS 99 (315)
T ss_dssp CCCCBC-TTSSBCHHHHHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEE
T ss_pred eeCcCC-CCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEe
Confidence 333555 5689999999987752 367888876443 22 344566777776553 4677763
No 332
>1uok_A Oligo-1,6-glucosidase; sugar degradation, hydrolase, TIM-barrel glycosidase; 2.00A {Bacillus cereus} SCOP: b.71.1.1 c.1.8.1
Probab=30.86 E-value=23 Score=32.72 Aligned_cols=25 Identities=8% Similarity=0.336 Sum_probs=21.5
Q ss_pred CCccCHHHHHHHHHhcCCEEEEecc
Q 023191 207 ARLYDYERIRKVCNKQKAIMLADMA 231 (286)
Q Consensus 207 g~~~~l~~I~~ia~~~~~~vivD~a 231 (286)
|+..+++++++-||++|+-||.|.+
T Consensus 76 Gt~~df~~lv~~~h~~Gi~VilD~V 100 (558)
T 1uok_A 76 GTMEDWDELLHEMHERNMKLMMDLV 100 (558)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 3455688999999999999999987
No 333
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=30.61 E-value=60 Score=25.77 Aligned_cols=51 Identities=10% Similarity=0.064 Sum_probs=38.5
Q ss_pred CCCHHHHHHHhhhcCCcEEEE--cCCCCCCccCHHHHHHHHHhcC----CEEEEecc
Q 023191 181 YIDYDQLEKSATLFRPKLIVA--GASAYARLYDYERIRKVCNKQK----AIMLADMA 231 (286)
Q Consensus 181 ~~d~e~l~~~i~~~~tk~v~i--~~~n~g~~~~l~~I~~ia~~~~----~~vivD~a 231 (286)
.+.++++.+.+.++++.+|.+ +...++....++++.+.+++.+ +.|++=++
T Consensus 129 ~vp~e~iv~~~~~~~~d~v~l~~S~l~~~~~~~~~~~i~~l~~~~~~~~v~v~vGG~ 185 (215)
T 3ezx_A 129 DVLNENVVEEAAKHKGEKVLLVGSALMTTSMLGQKDLMDRLNEEKLRDSVKCMFGGA 185 (215)
T ss_dssp SCCHHHHHHHHHHTTTSCEEEEEECSSHHHHTHHHHHHHHHHHTTCGGGSEEEEESS
T ss_pred CCCHHHHHHHHHHcCCCEEEEEchhcccCcHHHHHHHHHHHHHcCCCCCCEEEEECC
Confidence 467899988888779999999 6555555666888888888764 57777665
No 334
>1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A*
Probab=30.56 E-value=27 Score=32.46 Aligned_cols=24 Identities=8% Similarity=0.185 Sum_probs=21.2
Q ss_pred CccCHHHHHHHHHhcCCEEEEecc
Q 023191 208 RLYDYERIRKVCNKQKAIMLADMA 231 (286)
Q Consensus 208 ~~~~l~~I~~ia~~~~~~vivD~a 231 (286)
+..+++++++-||++|+-||.|.+
T Consensus 221 t~~df~~lv~~~H~~Gi~VilD~V 244 (588)
T 1j0h_A 221 DKETLKTLIDRCHEKGIRVMLDAV 244 (588)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEC
Confidence 455688999999999999999987
No 335
>2ze0_A Alpha-glucosidase; TIM barrel, glucoside hydrolase, extremophIle, hydrolase; 2.00A {Geobacillus SP}
Probab=30.31 E-value=23 Score=32.64 Aligned_cols=25 Identities=8% Similarity=0.324 Sum_probs=21.3
Q ss_pred CCccCHHHHHHHHHhcCCEEEEecc
Q 023191 207 ARLYDYERIRKVCNKQKAIMLADMA 231 (286)
Q Consensus 207 g~~~~l~~I~~ia~~~~~~vivD~a 231 (286)
|+..+++++++.||++|+-||.|.+
T Consensus 76 Gt~~d~~~lv~~~h~~Gi~vilD~V 100 (555)
T 2ze0_A 76 GTMDDFDELLAQAHRRGLKVILDLV 100 (555)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 3455688999999999999999988
No 336
>2ps2_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9440A, enolase superfamily, PSI-2; 1.80A {Aspergillus oryzae RIB40}
Probab=30.27 E-value=42 Score=29.01 Aligned_cols=50 Identities=14% Similarity=-0.055 Sum_probs=40.6
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEEEec
Q 023191 181 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADM 230 (286)
Q Consensus 181 ~~d~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~vivD~ 230 (286)
..+.+++++.+......+|.+.+...|.+.+..+++++|+++|+.+++=+
T Consensus 248 ~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~ 297 (371)
T 2ps2_A 248 ATNEMSIVKILADDAAEGIDLKISKAGGLTRGRRQRDICLAAGYSVSVQE 297 (371)
T ss_dssp CCSHHHHHHHHHHTCCSEEEEEHHHHTSHHHHHHHHHHHHHHTCEEEEEC
T ss_pred cCCHHHHHHHHHhCCCCEEEechhhcCCHHHHHHHHHHHHHcCCeEEecC
Confidence 45788899888774577887776667888889999999999999877643
No 337
>4aef_A Neopullulanase (alpha-amylase II); hydrolase, thermostability, high temperature; 2.34A {Pyrococcus furiosus}
Probab=29.87 E-value=24 Score=33.23 Aligned_cols=49 Identities=6% Similarity=-0.038 Sum_probs=34.6
Q ss_pred CHHHHHHHh---hhcCCcEEEEcC-----CCC--------------CCccCHHHHHHHHHhcCCEEEEecc
Q 023191 183 DYDQLEKSA---TLFRPKLIVAGA-----SAY--------------ARLYDYERIRKVCNKQKAIMLADMA 231 (286)
Q Consensus 183 d~e~l~~~i---~~~~tk~v~i~~-----~n~--------------g~~~~l~~I~~ia~~~~~~vivD~a 231 (286)
|+..|.+.| ++-...+|.++| ++. |+..+++++++-||++|+-||.|.+
T Consensus 237 dl~Gi~~kLdYLk~LGvt~I~L~Pif~s~~~~GYd~~dy~~idp~~Gt~~df~~LV~~aH~~GI~VIlD~V 307 (645)
T 4aef_A 237 DLIGIKEKIDHLVNLGINAIYLTPIFSSLTYHGYDIVDYFHVARRLGGDRAFVDLLSELKRFDIKVILDGV 307 (645)
T ss_dssp CHHHHHHTHHHHHHHTCCEEEECCCEEESSTTCSSEEEEEEECGGGTCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CHHHHHHhhHHHHHcCCCEEEECCCCCCCCCCCcCccCCCccCcccCCHHHHHHHHHHhhhcCCEEEEEec
Confidence 666665544 333577888742 222 3455689999999999999999997
No 338
>2pa6_A Enolase; glycolysis, lyase, magnesium, metal-binding, structural GENO NPPSFA; 1.85A {Methanocaldococcus jannaschii}
Probab=29.84 E-value=47 Score=29.46 Aligned_cols=46 Identities=7% Similarity=0.094 Sum_probs=34.5
Q ss_pred CHHHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEEE
Q 023191 183 DYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLA 228 (286)
Q Consensus 183 d~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~viv 228 (286)
+..++++.+...-..+|.+.+...|.+.+..+|+++|+++|+.+++
T Consensus 320 ~~~~~~~~i~~~a~d~i~ik~~~~GGitea~~ia~lA~~~g~~~~~ 365 (427)
T 2pa6_A 320 NVERLRKGIEMKAANALLLKVNQIGTLSEAVDAAQLAFRNGYGVVV 365 (427)
T ss_dssp CHHHHHHHHHHTCCSEEEECHHHHCSHHHHHHHHHHHHTTTCEEEE
T ss_pred CHHHHHHHHHhCCCCEEEEcccccCCHHHHHHHHHHHHHcCCeEEE
Confidence 4677777776534566666655577777888999999999998776
No 339
>1n8f_A DAHP synthetase; (beta/alpha)8 barrel, metal binding protein; HET: PEP; 1.75A {Escherichia coli} SCOP: c.1.10.4 PDB: 1gg1_A 1kfl_A* 1qr7_A*
Probab=29.47 E-value=52 Score=28.46 Aligned_cols=27 Identities=15% Similarity=0.213 Sum_probs=20.0
Q ss_pred cCHHHHHHHHHhcCCE--EEEeccccccc
Q 023191 210 YDYERIRKVCNKQKAI--MLADMAHISGL 236 (286)
Q Consensus 210 ~~l~~I~~ia~~~~~~--vivD~a~~~g~ 236 (286)
.++..+.+..++.++. ||+|++|+.+.
T Consensus 244 ~di~~~~~~l~~~~lp~~VivD~SH~ns~ 272 (350)
T 1n8f_A 244 KHVAEVKEGLNKAGLPAQVMIDFSHANSS 272 (350)
T ss_dssp HHHHHHHHHHHHTTCCCCEEEECSGGGTT
T ss_pred HHHHHHHHHHHHcCCCCeEEEECCCcccC
Confidence 3566666556777888 99999998653
No 340
>2qdd_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.30A {Roseovarius nubinhibens} PDB: 3fvd_B
Probab=29.43 E-value=48 Score=28.75 Aligned_cols=50 Identities=8% Similarity=-0.097 Sum_probs=40.1
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEEEec
Q 023191 181 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADM 230 (286)
Q Consensus 181 ~~d~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~vivD~ 230 (286)
..+.+++++.+......+|.+.+...|.+.+..+++++|+++|+.++.=+
T Consensus 246 ~~~~~~~~~~i~~~~~d~v~ik~~~~GGi~~~~~i~~~A~~~g~~~~~~~ 295 (378)
T 2qdd_A 246 LHEFSDHLAAWSRGACEGVKIKPNRVGGLTRARQIRDFGVSVGWQMHIED 295 (378)
T ss_dssp CCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHHTCEEEECC
T ss_pred cCCHHHHHHHHHhCCCCEEEecccccCCHHHHHHHHHHHHHcCCeEEecC
Confidence 44788888888764577887776667888889999999999999877763
No 341
>1b93_A Protein (methylglyoxal synthase); glycolytic bypass, lyase; 1.90A {Escherichia coli} SCOP: c.24.1.2 PDB: 1egh_A 1ik4_A* 1s8a_A 1s89_A
Probab=29.41 E-value=72 Score=23.97 Aligned_cols=46 Identities=7% Similarity=-0.057 Sum_probs=34.4
Q ss_pred HHHHHhhhcCCcEEEEcCC--CCCC-ccCHHHHHHHHHhcCCEEEEecc
Q 023191 186 QLEKSATLFRPKLIVAGAS--AYAR-LYDYERIRKVCNKQKAIMLADMA 231 (286)
Q Consensus 186 ~l~~~i~~~~tk~v~i~~~--n~g~-~~~l~~I~~ia~~~~~~vivD~a 231 (286)
++.++|.+.+..+|+..+. +-.. ..+...|.+.|-+|+++++.--+
T Consensus 73 ~I~d~I~~geIdlVInt~~pl~~~~h~~D~~~IrR~A~~~~IP~~T~la 121 (152)
T 1b93_A 73 QVGALISEGKIDVLIFFWDPLNAVPHDPDVKALLRLATVWNIPVATNVA 121 (152)
T ss_dssp HHHHHHHTTCCCEEEEECCTTSCCTTHHHHHHHHHHHHHTTCCEESSHH
T ss_pred hHHHHHHCCCccEEEEcCCcccCCcccccHHHHHHHHHHcCCCEEeCHH
Confidence 5777787767888877644 3222 45788999999999999987665
No 342
>2jli_A YSCU, YOP proteins translocation protein; cell membrane, transmembrane, protein transport, type III secretion system, plasmid, membrane; 1.13A {Yersinia pestis}
Probab=29.31 E-value=26 Score=25.41 Aligned_cols=20 Identities=15% Similarity=0.401 Sum_probs=17.8
Q ss_pred HHHHHHHHHhcCCEEEEecc
Q 023191 212 YERIRKVCNKQKAIMLADMA 231 (286)
Q Consensus 212 l~~I~~ia~~~~~~vivD~a 231 (286)
-.+|.++|++||++++.|-.
T Consensus 73 A~~I~~~A~e~~VPi~e~~~ 92 (123)
T 2jli_A 73 VQTVRKIAEEEGVPILQRIP 92 (123)
T ss_dssp HHHHHHHHHHHTCCEEECHH
T ss_pred HHHHHHHHHHcCCCEEeCHH
Confidence 45899999999999999975
No 343
>2al1_A Enolase 1, 2-phospho-D-; beta barrel, lyase; HET: PEP 2PG; 1.50A {Saccharomyces cerevisiae} SCOP: c.1.11.1 d.54.1.1 PDB: 1ebg_A 1ebh_A* 1one_A* 2one_A* 1p48_A* 1p43_A* 1l8p_A 4enl_A 1nel_A 1els_A 3enl_A 5enl_A* 6enl_A 7enl_A* 2al2_A* 2al2_B* 2xh7_A* 2xgz_A* 2xh2_A* 2xh4_A* ...
Probab=29.30 E-value=50 Score=29.49 Aligned_cols=46 Identities=2% Similarity=-0.053 Sum_probs=34.3
Q ss_pred CHHHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEEE
Q 023191 183 DYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLA 228 (286)
Q Consensus 183 d~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~viv 228 (286)
+..++++.+...-..+|.+.....|.+.+..+++++|+++|+.+++
T Consensus 326 ~~~~~~~~i~~~a~d~i~ikv~qiGGitea~~ia~lA~~~g~~~~~ 371 (436)
T 2al1_A 326 NPKRIATAIEKKAADALLLKVNQIGTLSESIKAAQDSFAAGWGVMV 371 (436)
T ss_dssp CHHHHHHHHHTTCCSEEEECHHHHCCHHHHHHHHHHHHHTTCEEEE
T ss_pred CHHHHHHHHHhCCCCEEEechhhcCCHHHHHHHHHHHHHcCCeEEE
Confidence 6777777776533466666555577888888999999999997765
No 344
>1xbi_A 50S ribosomal protein L7AE; alpha-beta-alpha sandwich fold, RNA binding protein/structural protein complex; HET: EPE; 1.45A {Methanocaldococcus jannaschii} SCOP: d.79.3.1 PDB: 1ra4_A* 1sds_A 3paf_A
Probab=29.09 E-value=76 Score=22.60 Aligned_cols=51 Identities=10% Similarity=0.072 Sum_probs=30.4
Q ss_pred HHHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEE-Eecccccc
Q 023191 184 YDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIML-ADMAHISG 235 (286)
Q Consensus 184 ~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~vi-vD~a~~~g 235 (286)
..+..+.++..+.++|++. ++.....-...|..+|++++++++ ++...-+|
T Consensus 34 ~~~v~kai~~gka~lViiA-~D~~p~~~~~~l~~lc~~~~VP~~~v~sk~eLG 85 (120)
T 1xbi_A 34 ANEVTKAVERGIAKLVIIA-EDVKPEEVVAHLPYLCEEKGIPYAYVASKQDLG 85 (120)
T ss_dssp HHHHHHHHHHTCCSEEEEE-SCCSSGGGTTTHHHHHHHHTCCEEEESCHHHHH
T ss_pred HHHHHHHHHcCCceEEEEc-CCCChHHHHHHHHHHHHhcCCCEEEeCCHHHHH
Confidence 4566777777678888884 221111114667788999998644 44333344
No 345
>1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A
Probab=29.04 E-value=28 Score=32.31 Aligned_cols=24 Identities=13% Similarity=0.283 Sum_probs=21.1
Q ss_pred CccCHHHHHHHHHhcCCEEEEecc
Q 023191 208 RLYDYERIRKVCNKQKAIMLADMA 231 (286)
Q Consensus 208 ~~~~l~~I~~ia~~~~~~vivD~a 231 (286)
+..+++++++-||++|+-||.|.+
T Consensus 218 t~~dfk~lv~~~H~~Gi~VilD~V 241 (585)
T 1wzl_A 218 DLPTFRRLVDEAHRRGIKIILDAV 241 (585)
T ss_dssp CHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEc
Confidence 455689999999999999999987
No 346
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=29.00 E-value=41 Score=29.30 Aligned_cols=50 Identities=6% Similarity=0.007 Sum_probs=40.4
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEEEec
Q 023191 181 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADM 230 (286)
Q Consensus 181 ~~d~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~vivD~ 230 (286)
..+.+++++.+......+|.+.+...|.+.+..+++++|+++|+.++.=+
T Consensus 250 i~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~ 299 (384)
T 2pgw_A 250 AFTLYDVYEICRQRAADMICIGPREIGGIQPMMKAAAVAEAAGLKICIHS 299 (384)
T ss_dssp CCSHHHHHHHHHTTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCCEEECC
T ss_pred cCCHHHHHHHHHcCCCCEEEEcchhhCCHHHHHHHHHHHHHCCCeEeecc
Confidence 44788899888764578888876667888889999999999999776654
No 347
>2okt_A OSB synthetase, O-succinylbenzoic acid synthetase; enolase, structural genom protein structure initiative, PSI, nysgrc; 1.30A {Staphylococcus aureus subsp} PDB: 2ola_A 3h70_A
Probab=28.87 E-value=74 Score=27.10 Aligned_cols=50 Identities=8% Similarity=0.022 Sum_probs=40.6
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEEEec
Q 023191 181 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADM 230 (286)
Q Consensus 181 ~~d~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~vivD~ 230 (286)
..+..++++++......+|.+.+...|.+.+..+|+++|+++|+.++.=+
T Consensus 223 ~~~~~~~~~~i~~~a~d~i~~k~~~~GGit~~~~ia~~A~~~gi~~~~~~ 272 (342)
T 2okt_A 223 ATSLLDIINLIELYNVKVVVLKPFRLGGIDKVQTAIDTLKSHGAKVVIGG 272 (342)
T ss_dssp CCCHHHHHHHHHHSCCCEEEECHHHHTSGGGHHHHHHHHHHTTCEEEEBC
T ss_pred CCCHHHHHHHHHhCCCCEEEEChhhcCCHHHHHHHHHHHHHCCCEEEEcC
Confidence 45788888888774567777777778888899999999999999877654
No 348
>2zic_A Dextran glucosidase; TIM barrel, (beta/alpha)8-barrel, hydrolase; 2.20A {Streptococcus mutans} PDB: 2zid_A*
Probab=28.83 E-value=24 Score=32.38 Aligned_cols=24 Identities=8% Similarity=0.241 Sum_probs=20.7
Q ss_pred CccCHHHHHHHHHhcCCEEEEecc
Q 023191 208 RLYDYERIRKVCNKQKAIMLADMA 231 (286)
Q Consensus 208 ~~~~l~~I~~ia~~~~~~vivD~a 231 (286)
+..+++++++-||++|+-||.|.+
T Consensus 77 t~~df~~lv~~~h~~Gi~VilD~V 100 (543)
T 2zic_A 77 NMADMDNLLTQAKMRGIKIIMDLV 100 (543)
T ss_dssp CHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEe
Confidence 445688999999999999999988
No 349
>1rlg_A 50S ribosomal protein L7AE; protein-RNA, structural protein/RNA complex; HET: 5BU; 2.70A {Archaeoglobus fulgidus} SCOP: d.79.3.1
Probab=28.76 E-value=95 Score=21.96 Aligned_cols=43 Identities=9% Similarity=0.083 Sum_probs=27.6
Q ss_pred HHHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEE
Q 023191 184 YDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIML 227 (286)
Q Consensus 184 ~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~vi 227 (286)
..+..+.++..+.++|++. ++.....-...|..+|++++++++
T Consensus 32 ~~~v~kal~~gka~lViiA-~D~~~~~~~~~l~~lc~~~~Vp~~ 74 (119)
T 1rlg_A 32 TNETTKAVERGLAKLVYIA-EDVDPPEIVAHLPLLCEEKNVPYI 74 (119)
T ss_dssp HHHHHHHHTTTCCSEEEEE-SCCSCSTTTTHHHHHHHHHTCCEE
T ss_pred HHHHHHHHHcCCCcEEEEe-CCCChHHHHHHHHHHHHHcCCCEE
Confidence 4566777776578888884 221111115677789999998654
No 350
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=28.17 E-value=1.6e+02 Score=24.47 Aligned_cols=56 Identities=14% Similarity=0.226 Sum_probs=35.8
Q ss_pred ccCCCCCCCCHHHHHHHhh---h-cCCcEEEEcCCC--CC--CccCHHHHHHHHHhc---CCEEEEec
Q 023191 174 RLNESTGYIDYDQLEKSAT---L-FRPKLIVAGASA--YA--RLYDYERIRKVCNKQ---KAIMLADM 230 (286)
Q Consensus 174 ~~~~~~~~~d~e~l~~~i~---~-~~tk~v~i~~~n--~g--~~~~l~~I~~ia~~~---~~~vivD~ 230 (286)
+++ +++.+|.+.+++.++ + .....|+++.++ .. +..+..++.+.+.+. .+.||+=.
T Consensus 14 Pf~-~dg~iD~~~l~~lv~~li~~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGv 80 (293)
T 1f6k_A 14 SFN-EDGTINEKGLRQIIRHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDEAKDQIALIAQV 80 (293)
T ss_dssp CBC-TTSCBCHHHHHHHHHHHHHTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEC
T ss_pred CCC-CCCCcCHHHHHHHHHHHHhhCCCcEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEec
Confidence 454 568999999988764 2 367788886443 22 344555666766553 57777643
No 351
>2ioj_A Hypothetical protein AF_1212; NYSGXRC, PFAM:DRTGG, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Archaeoglobus fulgidus} SCOP: c.98.2.2
Probab=28.16 E-value=54 Score=23.79 Aligned_cols=37 Identities=5% Similarity=0.047 Sum_probs=25.3
Q ss_pred HHHHhh-hcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEEE
Q 023191 187 LEKSAT-LFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLA 228 (286)
Q Consensus 187 l~~~i~-~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~viv 228 (286)
+..++. . ++.+|+++ +...+-+++.++|++++++|+.
T Consensus 66 ~l~a~~~~-~~~~iIlt----~g~~~~~~i~~~A~~~~ipvl~ 103 (139)
T 2ioj_A 66 LLTALEMP-NVRCLILT----GNLEPVQLVLTKAEERGVPVIL 103 (139)
T ss_dssp HHHHTTCT-TEEEEEEE----TTCCCCHHHHHHHHHHTCCEEE
T ss_pred HHHHHhCC-CCcEEEEc----CCCCCCHHHHHHHHHCCCeEEE
Confidence 344454 4 67788875 2334667788999999988775
No 352
>2p8b_A Mandelate racemase/muconate lactonizing enzyme family protein; enolase superfamily, prediction of function; HET: NSK; 1.70A {Bacillus cereus atcc 14579} PDB: 2p88_A* 2p8c_A*
Probab=28.13 E-value=54 Score=28.25 Aligned_cols=50 Identities=4% Similarity=-0.033 Sum_probs=40.4
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEEEec
Q 023191 181 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADM 230 (286)
Q Consensus 181 ~~d~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~vivD~ 230 (286)
..+.+++++.+......+|.+.+...|.+.+..+++++|+++|+.+++=+
T Consensus 246 ~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~ 295 (369)
T 2p8b_A 246 LKSSREMRQIIKLEAADKVNIKLMKCGGIYPAVKLAHQAEMAGIECQVGS 295 (369)
T ss_dssp CCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEECC
T ss_pred CCCHHHHHHHHHhCCCCEEEeecchhCCHHHHHHHHHHHHHcCCcEEecC
Confidence 45788888888774577888776667888889999999999999877643
No 353
>3jva_A Dipeptide epimerase; enolase superfamily, isomerase; 1.70A {Enterococcus faecalis V583} PDB: 3jw7_A* 3jzu_A* 3k1g_A* 3kum_A*
Probab=28.12 E-value=55 Score=28.14 Aligned_cols=51 Identities=8% Similarity=0.043 Sum_probs=42.0
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEEEecc
Q 023191 181 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMA 231 (286)
Q Consensus 181 ~~d~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~vivD~a 231 (286)
..+.+++++.+......+|.+.+...|.+.+..+|+++|+++|+.+++-+.
T Consensus 243 ~~~~~~~~~~l~~~~~d~v~~k~~~~GGit~~~~i~~~A~~~gi~~~~~~~ 293 (354)
T 3jva_A 243 CFDAQDALELVKKGTVDVINIKLMKCGGIHEALKINQICETAGIECMIGCM 293 (354)
T ss_dssp CCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEECCC
T ss_pred cCCHHHHHHHHHcCCCCEEEECchhcCCHHHHHHHHHHHHHcCCeEEecCC
Confidence 567888888887646788888777788888899999999999999876554
No 354
>3bzs_A ESCU; auto cleavage protein, intein, T3SS, TTSS, asparagine cycliz membrane, membrane protein, protein transport; 1.48A {Escherichia coli} PDB: 3bzr_A 3bzp_A 3bzt_A 3c03_A
Probab=28.10 E-value=28 Score=25.78 Aligned_cols=20 Identities=15% Similarity=0.164 Sum_probs=17.9
Q ss_pred HHHHHHHHHhcCCEEEEecc
Q 023191 212 YERIRKVCNKQKAIMLADMA 231 (286)
Q Consensus 212 l~~I~~ia~~~~~~vivD~a 231 (286)
-..|.++|++||++++.|-.
T Consensus 83 A~~I~e~A~e~gVPi~e~~~ 102 (137)
T 3bzs_A 83 ALQIIKLAELYDIPVIEDIP 102 (137)
T ss_dssp HHHHHHHHHHHTCCEEECHH
T ss_pred HHHHHHHHHHcCCCEEeCHH
Confidence 56899999999999999975
No 355
>2akz_A Gamma enolase, neural; fluoride inhibition, negative cooperativity, glycolysis, , isothermal titration calorimetry, lyase; 1.36A {Homo sapiens} SCOP: c.1.11.1 d.54.1.1 PDB: 2akm_A 1te6_A 2psn_A 3b97_A 2xsx_A 1pdz_A 1pdy_A
Probab=28.03 E-value=54 Score=29.29 Aligned_cols=46 Identities=4% Similarity=0.025 Sum_probs=34.4
Q ss_pred CHHHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEEE
Q 023191 183 DYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLA 228 (286)
Q Consensus 183 d~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~viv 228 (286)
++.++++.+...-..+|.+.....|.+.+..+++++|+++|+.+++
T Consensus 323 ~~~~~~~~i~~~a~d~i~iKv~qiGGitea~~ia~lA~~~g~~~~~ 368 (439)
T 2akz_A 323 NPKRIERAVEEKACNCLLLKVNQIGSVTEAIQACKLAQENGWGVMV 368 (439)
T ss_dssp CHHHHHHHHHTTCCSEEEECHHHHCCHHHHHHHHHHHHHTTCEEEE
T ss_pred CHHHHHHHHHhCCCCEEEechhhcCCHHHHHHHHHHHHHCCCeEEe
Confidence 6777777776623466666555577888888999999999997765
No 356
>1snn_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, isomerase; HET: 5RP; 1.55A {Methanocaldococcus jannaschii} SCOP: d.115.1.2 PDB: 1pvy_A* 1pvw_A
Probab=27.77 E-value=84 Score=25.32 Aligned_cols=34 Identities=12% Similarity=0.170 Sum_probs=26.3
Q ss_pred CCcEEEEcCCC-CCCccCHHHHHHHHHhcCCEEEE
Q 023191 195 RPKLIVAGASA-YARLYDYERIRKVCNKQKAIMLA 228 (286)
Q Consensus 195 ~tk~v~i~~~n-~g~~~~l~~I~~ia~~~~~~viv 228 (286)
+|.+|+..--| -|......++.++|++||+.++.
T Consensus 178 ~Pa~VicEi~~ddG~mar~~~l~~fA~~h~l~~it 212 (227)
T 1snn_A 178 VPITTICEMMGDDGNAMSKNETKRYAEKHNLIYLS 212 (227)
T ss_dssp CSEEEEEEEBCTTSSBCCHHHHHHHHHHHTCCEEE
T ss_pred CceEEEEEEeCCCCCcCCHHHHHHHHHHcCCcEEE
Confidence 67666654333 58888999999999999988775
No 357
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1
Probab=27.76 E-value=51 Score=28.41 Aligned_cols=50 Identities=4% Similarity=-0.090 Sum_probs=40.5
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEEEec
Q 023191 181 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADM 230 (286)
Q Consensus 181 ~~d~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~vivD~ 230 (286)
..+.+++++.+......+|.+.+...|.+.+..+++++|+++|+.+++=+
T Consensus 248 ~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~ 297 (370)
T 1nu5_A 248 LSSLSSAFELARDHAVDAFSLKLCNMGGIANTLKVAAVAEAAGISSYGGT 297 (370)
T ss_dssp CCSHHHHHHHHHTTCCSEEEECHHHHTSHHHHHHHHHHHHHHTCEEEECC
T ss_pred CCCHHHHHHHHHhCCCCEEEEchhhcCCHHHHHHHHHHHHHcCCcEEecC
Confidence 46788899988774577888776668888889999999999999877543
No 358
>1g5a_A Amylosucrase; glycosyltransferase, glycoside hydrolase, (beta-alpha)8 barrel; HET: EPE; 1.40A {Neisseria polysaccharea} SCOP: b.71.1.1 c.1.8.1 PDB: 1jg9_A* 1mw1_A* 1mw2_A* 1mw3_A* 3ueq_A* 1jgi_A* 1mvy_A* 1mw0_A* 1s46_A* 1zs2_A*
Probab=27.72 E-value=32 Score=32.31 Aligned_cols=26 Identities=8% Similarity=0.114 Sum_probs=22.4
Q ss_pred CCCccCHHHHHHHHHhcCCEEEEecc
Q 023191 206 YARLYDYERIRKVCNKQKAIMLADMA 231 (286)
Q Consensus 206 ~g~~~~l~~I~~ia~~~~~~vivD~a 231 (286)
+|+..+++++++-||++|+-||.|.+
T Consensus 159 ~Gt~~d~~~Lv~~ah~~GI~VilD~V 184 (628)
T 1g5a_A 159 LGTIGDLREVIAALHEAGISAVVDFI 184 (628)
T ss_dssp TCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 45566789999999999999999987
No 359
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=27.62 E-value=45 Score=28.95 Aligned_cols=50 Identities=2% Similarity=-0.162 Sum_probs=40.4
Q ss_pred CCCC-HHHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEEEe
Q 023191 180 GYID-YDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 229 (286)
Q Consensus 180 ~~~d-~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~vivD 229 (286)
...+ .+++++.+......+|.+.+...|.+.+..+|+++|+++|+.++.=
T Consensus 259 ~~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~ 309 (382)
T 1rvk_A 259 SAAGKHWHRAEWIKAGACDILRTGVNDVGGITPALKTMHLAEAFGMECEVH 309 (382)
T ss_dssp SCSSHHHHHHHHHHTTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCCEEEC
T ss_pred CccCcHHHHHHHHHcCCCCEEeeCchhcCCHHHHHHHHHHHHHcCCeEeec
Confidence 3456 8899998877457888887766888888999999999999876665
No 360
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=27.60 E-value=1.4e+02 Score=24.67 Aligned_cols=57 Identities=12% Similarity=0.091 Sum_probs=36.2
Q ss_pred ccCCCCCCCCHHHHHHHhhh---cCCcEEEEcCCC--CC--CccCHHHHHHHHHhc---CCEEEEecc
Q 023191 174 RLNESTGYIDYDQLEKSATL---FRPKLIVAGASA--YA--RLYDYERIRKVCNKQ---KAIMLADMA 231 (286)
Q Consensus 174 ~~~~~~~~~d~e~l~~~i~~---~~tk~v~i~~~n--~g--~~~~l~~I~~ia~~~---~~~vivD~a 231 (286)
+++ +++.+|.+.+++.++. .....++++.++ .. +..+..++.+.+.+. .+.||+=..
T Consensus 12 Pf~-~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg 78 (292)
T 2ojp_A 12 PMD-EKGNVCRASLKKLIDYHVASGTSAIVSVGTTGESATLNHDEHADVVMMTLDLADGRIPVIAGTG 78 (292)
T ss_dssp CBC-TTSCBCHHHHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECC
T ss_pred cCC-CCCCcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCcEEEecC
Confidence 454 5689999999887642 367888886443 22 344555666766553 467775443
No 361
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=27.53 E-value=76 Score=27.82 Aligned_cols=54 Identities=15% Similarity=0.254 Sum_probs=37.6
Q ss_pred CCHHHHHHHhhh----cCCcEEEE-c-CCCCC----CccCHHHHHHHHHhcCCEEEEecccccc
Q 023191 182 IDYDQLEKSATL----FRPKLIVA-G-ASAYA----RLYDYERIRKVCNKQKAIMLADMAHISG 235 (286)
Q Consensus 182 ~d~e~l~~~i~~----~~tk~v~i-~-~~n~g----~~~~l~~I~~ia~~~~~~vivD~a~~~g 235 (286)
.+++++..++.. .+.+++++ + .++++ ...++..|..+.+..+++|++|.+|+.|
T Consensus 260 ~t~~e~~~Ave~i~~~Gn~~i~L~~rG~s~yp~~~~~~ldl~~i~~lk~~~~lpV~~D~th~~G 323 (385)
T 3nvt_A 260 ATIEEFIGAAEYIMSQGNGKIILCERGIRTYEKATRNTLDISAVPILKKETHLPVMVDVTHSTG 323 (385)
T ss_dssp CCHHHHHHHHHHHHTTTCCCEEEEECCBCCSCCSSSSBCCTTHHHHHHHHBSSCEEEEHHHHHC
T ss_pred CCHHHHHHHHHHHHHcCCCeEEEEECCCCCCCCCCccccCHHHHHHHHHhcCCCEEEcCCCCCC
Confidence 688888766532 25567666 3 34443 2357888888877789999999998865
No 362
>3pzt_A Endoglucanase; alpha/beta barrel, glycosyl hydrolase, cellulose binding, HY; 1.97A {Bacillus subtilis subsp} PDB: 3pzu_A 3pzv_A
Probab=27.29 E-value=37 Score=28.83 Aligned_cols=51 Identities=10% Similarity=0.078 Sum_probs=31.8
Q ss_pred CCCHHHHHHHhhhcCCcEEEEc--CCCCCC------ccCHHHHHHHHHhcCCEEEEecc
Q 023191 181 YIDYDQLEKSATLFRPKLIVAG--ASAYAR------LYDYERIRKVCNKQKAIMLADMA 231 (286)
Q Consensus 181 ~~d~e~l~~~i~~~~tk~v~i~--~~n~g~------~~~l~~I~~ia~~~~~~vivD~a 231 (286)
.++.++++.+.++.....|=+. +...+. ...++++++.|+++|++||+|--
T Consensus 68 ~~~~~~~~~l~~~~G~N~VRi~~~~~~~~~~~~~~~~~~ld~~v~~a~~~Gi~VilD~H 126 (327)
T 3pzt_A 68 YVNKDSLKWLRDDWGITVFRAAMYTADGGYIDNPSVKNKVKEAVEAAKELGIYVIIDWH 126 (327)
T ss_dssp GCSHHHHHHHHHHTCCSEEEEEEESSTTSTTTCGGGHHHHHHHHHHHHHHTCEEEEEEE
T ss_pred CCCHHHHHHHHHhcCCCEEEEEeEECCCCcccCHHHHHHHHHHHHHHHHCCCEEEEEec
Confidence 3556677765444344444442 211121 23478999999999999999963
No 363
>1pqh_A Aspartate 1-decarboxylase; pyruvoyl dependent decarboxylase, protein SELF-processing; 1.29A {Escherichia coli} SCOP: b.52.2.1 PDB: 1pqf_A 1pt1_A 1pt0_A 1pyq_A 1ppy_A 1pqe_A 1pyu_B 3tm7_B 1aw8_B 1pyu_A 3tm7_A 1aw8_A
Probab=27.13 E-value=1e+02 Score=22.71 Aligned_cols=14 Identities=14% Similarity=0.304 Sum_probs=10.2
Q ss_pred hhcCCcEEEEcCCC
Q 023191 192 TLFRPKLIVAGASA 205 (286)
Q Consensus 192 ~~~~tk~v~i~~~n 205 (286)
..++|++|+++..|
T Consensus 116 ~~~~P~VV~vd~~N 129 (143)
T 1pqh_A 116 RTWRPNVAYFEGDN 129 (143)
T ss_dssp TTCCCEEEEEETTT
T ss_pred ccCCCeEEEECCCC
Confidence 44588888887666
No 364
>3dip_A Enolase; structural genomics, isomerase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, NYSGXRC, lyase; HET: SIC; 2.50A {Unidentified}
Probab=27.05 E-value=1e+02 Score=27.09 Aligned_cols=49 Identities=4% Similarity=0.017 Sum_probs=41.0
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEEEe
Q 023191 181 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 229 (286)
Q Consensus 181 ~~d~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~vivD 229 (286)
..+.+++++++......+|.+.....|.+.+..+|+++|+++|+.+..=
T Consensus 274 ~~~~~~~~~~l~~~~~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h 322 (410)
T 3dip_A 274 LAGTRRFHEMLCADAIDFVMLDLTWCGGLSEGRKIAALAETHARPLAPH 322 (410)
T ss_dssp CCSHHHHHHHHHTTCCSEEEECTTTSSCHHHHHHHHHHHHHTTCCEEEC
T ss_pred cCCHHHHHHHHHcCCCCeEeecccccCCHHHHHHHHHHHHHcCCEEeee
Confidence 4578899998877567888888888898889999999999999988653
No 365
>4aee_A Alpha amylase, catalytic region; hydrolase, hyperthermostable, cyclodextrin hydrolase, GH13; 2.28A {Staphylothermus marinus}
Probab=27.00 E-value=28 Score=33.08 Aligned_cols=49 Identities=18% Similarity=0.253 Sum_probs=34.6
Q ss_pred CHHHHHHHh---hhcCCcEEEEcC-----CC--------------CCCccCHHHHHHHHHhcCCEEEEecc
Q 023191 183 DYDQLEKSA---TLFRPKLIVAGA-----SA--------------YARLYDYERIRKVCNKQKAIMLADMA 231 (286)
Q Consensus 183 d~e~l~~~i---~~~~tk~v~i~~-----~n--------------~g~~~~l~~I~~ia~~~~~~vivD~a 231 (286)
|+..|.+.+ ++-...+|.++| ++ +|+..+++++++-||++|+-||.|.+
T Consensus 263 dl~Gi~~kLdyLk~LGvt~IwL~Pi~~s~~~~GYd~~Dy~~idp~~Gt~~df~~Lv~~aH~~GikVilD~V 333 (696)
T 4aee_A 263 DLAGIMKHIDHLEDLGVETIYLTPIFSSTSYHRYDTIDYKSIDKYLGTMEDFEKLVQVLHSRKIKIVLDIT 333 (696)
T ss_dssp CHHHHHTTHHHHHHHTCCEEEECCCEEESSSSCCSEEEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CHHHHHHHhHHHHHcCCCEEEECCcccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEecc
Confidence 566665544 233577888752 22 23455688999999999999999988
No 366
>3hp4_A GDSL-esterase; psychrotrophic, monoethylphosphonate, hydrolase; HET: MIR; 1.35A {Pseudoalteromonas SP} SCOP: c.23.10.0
Probab=26.98 E-value=78 Score=23.43 Aligned_cols=47 Identities=9% Similarity=0.132 Sum_probs=28.1
Q ss_pred CHHHHHHHhhhcCCcEEEEc---CCCCCCc--cC-HHHHHHHHHhcCCEEEEec
Q 023191 183 DYDQLEKSATLFRPKLIVAG---ASAYARL--YD-YERIRKVCNKQKAIMLADM 230 (286)
Q Consensus 183 d~e~l~~~i~~~~tk~v~i~---~~n~g~~--~~-l~~I~~ia~~~~~~vivD~ 230 (286)
+++++.+.++..++++++++ |++.+.. .. -+.+.++|+++++.++ |.
T Consensus 91 ~~~~~i~~~~~~~~~vvl~~~~~p~~~~~~~~~~~~~~~~~~a~~~~~~~v-d~ 143 (185)
T 3hp4_A 91 NLTALVKKSQAANAMTALMEIYIPPNYGPRYSKMFTSSFTQISEDTNAHLM-NF 143 (185)
T ss_dssp HHHHHHHHHHHTTCEEEEECCCCCSTTCHHHHHHHHHHHHHHHHHHCCEEE-CC
T ss_pred HHHHHHHHHHHcCCeEEEEeCCCCCcccHHHHHHHHHHHHHHHHHcCCEEE-cc
Confidence 34555555555467888775 5444421 12 3466788999987754 54
No 367
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=26.91 E-value=1.5e+02 Score=24.57 Aligned_cols=55 Identities=18% Similarity=0.206 Sum_probs=35.4
Q ss_pred ccCCCCCCCCHHHHHHHhhh---cCCcEEEEcCCC--CC--CccCHHHHHHHHHhc---CCEEEEe
Q 023191 174 RLNESTGYIDYDQLEKSATL---FRPKLIVAGASA--YA--RLYDYERIRKVCNKQ---KAIMLAD 229 (286)
Q Consensus 174 ~~~~~~~~~d~e~l~~~i~~---~~tk~v~i~~~n--~g--~~~~l~~I~~ia~~~---~~~vivD 229 (286)
+++ +++.+|++.+++.++. .....++++.++ .. +..+..++.+.+.+. .+.||+=
T Consensus 12 Pf~-~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaG 76 (291)
T 3tak_A 12 PML-KDGGVDWKSLEKLVEWHIEQGTNSIVAVGTTGEASTLSMEEHTQVIKEIIRVANKRIPIIAG 76 (291)
T ss_dssp CBC-TTSCBCHHHHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEE
T ss_pred CCC-CCCCcCHHHHHHHHHHHHHCCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCeEEEe
Confidence 455 5689999999887642 367888876443 22 344555677766553 4677763
No 368
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample}
Probab=26.68 E-value=60 Score=28.29 Aligned_cols=52 Identities=8% Similarity=0.005 Sum_probs=41.1
Q ss_pred CCCCHHHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEEEecc
Q 023191 180 GYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMA 231 (286)
Q Consensus 180 ~~~d~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~vivD~a 231 (286)
...+.+++++.+......+|.+.+...|.+.+..+++++|+++|+.++.=+.
T Consensus 253 ~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~gi~~~~~~~ 304 (391)
T 2qgy_A 253 KQSGLVHFRELISRNAADIFNPDISGMGGLIDIIEISNEASNNGIFISPHCW 304 (391)
T ss_dssp TCCSHHHHHHHHHTTCCSEECCBTTTSSCHHHHHHHHHHHHHTTCEECCBCC
T ss_pred CcCCHHHHHHHHHcCCCCEEEECcchhCCHHHHHHHHHHHHHCCCEEeccCC
Confidence 3457889999887645677777677788888899999999999998776543
No 369
>1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1
Probab=26.61 E-value=31 Score=32.02 Aligned_cols=49 Identities=8% Similarity=0.144 Sum_probs=33.7
Q ss_pred CHHHHHHHh---hhcCCcEEEEcC-----CCC--------------CCccCHHHHHHHHHhcCCEEEEecc
Q 023191 183 DYDQLEKSA---TLFRPKLIVAGA-----SAY--------------ARLYDYERIRKVCNKQKAIMLADMA 231 (286)
Q Consensus 183 d~e~l~~~i---~~~~tk~v~i~~-----~n~--------------g~~~~l~~I~~ia~~~~~~vivD~a 231 (286)
|+..+.+.+ ++-....|.+.| +|. |+..+++++++-||++|+-||.|.+
T Consensus 170 d~~gi~~~LdyLk~LGvt~I~L~Pi~~~~~~~GYd~~dy~~idp~~Gt~~df~~lv~~~H~~Gi~VilD~V 240 (583)
T 1ea9_C 170 DLQGVIDHLDHLSKLGVNAVYFTPLFKATTNHKYDTEDYFQIDPQFGDKDTLKKLVDLCHERGIRVLLDAV 240 (583)
T ss_dssp CHHHHHHTHHHHHHHTCSEEEECCCSSCSSSSTTSCSCTTCCCTTTCCHHHHHHHHHHHTTTTCEEEEECC
T ss_pred CHHHHHHhhHHHHHcCCCEEEECCCccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEEc
Confidence 666665543 333567787742 221 2344688999999999999999988
No 370
>2jlj_A YSCU, YOP proteins translocation protein U; cell membrane, transmembrane, yersinia pesits, protein trans type III secretion system, membrane; 1.3A {Yersinia pestis} PDB: 2jlh_A* 2v5g_A 2w0r_A
Probab=26.47 E-value=31 Score=25.78 Aligned_cols=20 Identities=15% Similarity=0.401 Sum_probs=18.0
Q ss_pred HHHHHHHHHhcCCEEEEecc
Q 023191 212 YERIRKVCNKQKAIMLADMA 231 (286)
Q Consensus 212 l~~I~~ia~~~~~~vivD~a 231 (286)
-..|.++|++||++++.|-.
T Consensus 82 A~~I~e~A~e~gVPi~e~~~ 101 (144)
T 2jlj_A 82 VQTVRKIAEEEGVPILQRIP 101 (144)
T ss_dssp HHHHHHHHHHHTCCEEECHH
T ss_pred HHHHHHHHHHcCCCEEeCHH
Confidence 56899999999999999975
No 371
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=26.46 E-value=1.6e+02 Score=25.10 Aligned_cols=55 Identities=11% Similarity=0.119 Sum_probs=35.7
Q ss_pred ccCCCCCCCCHHHHHHHhhh---cCCcEEEEcCCC--CC--CccCHHHHHHHHHhc---CCEEEEe
Q 023191 174 RLNESTGYIDYDQLEKSATL---FRPKLIVAGASA--YA--RLYDYERIRKVCNKQ---KAIMLAD 229 (286)
Q Consensus 174 ~~~~~~~~~d~e~l~~~i~~---~~tk~v~i~~~n--~g--~~~~l~~I~~ia~~~---~~~vivD 229 (286)
+++ +++.+|.+.+++.++. .....|+++.++ .. +..+..++.+.+.+. .++||+=
T Consensus 45 PF~-~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaG 109 (332)
T 2r8w_A 45 PAD-EAGRVDIEAFSALIARLDAAEVDSVGILGSTGIYMYLTREERRRAIEAAATILRGRRTLMAG 109 (332)
T ss_dssp CBC-TTCCBCHHHHHHHHHHHHHHTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEE
T ss_pred CcC-CCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEe
Confidence 444 5689999999887642 367888886443 22 344555667766553 4788764
No 372
>3czg_A Sucrose hydrolase; (alpha/beta)8-barrel; HET: GLC; 1.80A {Xanthomonas axonopodis PV} PDB: 3cze_A* 3czl_A* 3czk_A* 2wpg_A
Probab=26.33 E-value=30 Score=32.61 Aligned_cols=24 Identities=13% Similarity=0.045 Sum_probs=20.9
Q ss_pred CccCHHHHHHHHHhcCCEEEEecc
Q 023191 208 RLYDYERIRKVCNKQKAIMLADMA 231 (286)
Q Consensus 208 ~~~~l~~I~~ia~~~~~~vivD~a 231 (286)
+..+++++++-||++|+-||.|.+
T Consensus 154 t~~df~~Lv~~aH~~GI~VilD~V 177 (644)
T 3czg_A 154 SNDDLVALTSRLREAGISLCADFV 177 (644)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEe
Confidence 345688999999999999999988
No 373
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=25.86 E-value=87 Score=27.07 Aligned_cols=55 Identities=16% Similarity=0.142 Sum_probs=37.4
Q ss_pred CCHHHHHHHhh----hcCCcEEEE-----cCCCC-CCccCHHHHHHHHHhcCCEEEEeccccccc
Q 023191 182 IDYDQLEKSAT----LFRPKLIVA-----GASAY-ARLYDYERIRKVCNKQKAIMLADMAHISGL 236 (286)
Q Consensus 182 ~d~e~l~~~i~----~~~tk~v~i-----~~~n~-g~~~~l~~I~~ia~~~~~~vivD~a~~~g~ 236 (286)
.+++++..++. ..+..++++ +++++ ....++..|..+.+..+++|+.|..|+.|.
T Consensus 224 ~tl~ei~~Ave~i~~~GN~~viLceRG~~typ~~~~~~vdl~ai~~lk~~~~lpVi~dssHs~G~ 288 (350)
T 1vr6_A 224 NTIEEFLLSAEYIANSGNTKIILCERGIRTFEKATRNTLDISAVPIIRKESHLPILVDPSHSGGR 288 (350)
T ss_dssp CCHHHHHHHHHHHHHTTCCCEEEEECCBCCSCCSSSSBCCTTHHHHHHHHBSSCEEECHHHHHCS
T ss_pred CCHHHHHHHHHHHHHCCCCeEEEEeCCCCCCCCcChhhhhHHHHHHHHHhhCCCEEEeCCCCCcc
Confidence 47777776654 235567665 12332 244578888887777799999999999773
No 374
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=25.80 E-value=1.4e+02 Score=25.15 Aligned_cols=56 Identities=20% Similarity=0.252 Sum_probs=35.8
Q ss_pred cccCCCCCCCCHHHHHHHhhh---cCCcEEEEcCCC--CC--CccCHHHHHHHHHhc---CCEEEEe
Q 023191 173 YRLNESTGYIDYDQLEKSATL---FRPKLIVAGASA--YA--RLYDYERIRKVCNKQ---KAIMLAD 229 (286)
Q Consensus 173 ~~~~~~~~~~d~e~l~~~i~~---~~tk~v~i~~~n--~g--~~~~l~~I~~ia~~~---~~~vivD 229 (286)
.+++ +++.+|++.+++.++. .....++++.++ .. +..+..++.+.+.+. .+.||+=
T Consensus 33 TPf~-~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaG 98 (314)
T 3qze_A 33 TPFD-AQGRLDWDSLAKLVDFHLQEGTNAIVAVGTTGESATLDVEEHIQVIRRVVDQVKGRIPVIAG 98 (314)
T ss_dssp CCBC-TTSCBCHHHHHHHHHHHHHHTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEE
T ss_pred CCCC-CCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEe
Confidence 3455 5689999999987642 267888886443 22 444555676666553 4677763
No 375
>2aif_A Ribosomal protein L7A; high-mobility like protein, transcription factor, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum} SCOP: d.79.3.1
Probab=25.71 E-value=78 Score=23.09 Aligned_cols=43 Identities=9% Similarity=0.108 Sum_probs=27.9
Q ss_pred HHHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEE
Q 023191 184 YDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIML 227 (286)
Q Consensus 184 ~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~vi 227 (286)
..+..+.++..+.++|++. ++.....-++.|..+|++++++++
T Consensus 46 ~~~v~kal~~gkaklViiA-~D~~~~~~~~~l~~lc~~~~IP~~ 88 (135)
T 2aif_A 46 ANEATKALNRGIAEIVLLA-ADAEPLEILLHLPLVCEDKNTPYV 88 (135)
T ss_dssp HHHHHHHHHTTCEEEEEEE-TTCSCHHHHHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHHcCCCeEEEEe-cCCChHHHHhHHHHHHHhcCCcEE
Confidence 4567777776567777774 222211113788899999998655
No 376
>3qn3_A Enolase; structural genomics, center for structural genomics of infec diseases, csgid, glycolysis, lyase; 2.13A {Campylobacter jejuni}
Probab=25.66 E-value=67 Score=28.51 Aligned_cols=46 Identities=7% Similarity=0.056 Sum_probs=33.5
Q ss_pred HHHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEEEe
Q 023191 184 YDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 229 (286)
Q Consensus 184 ~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~vivD 229 (286)
+.++++.+...-..+|.+.....|.+.+..+++++|+++|+.+++=
T Consensus 317 ~~~~~~~i~~~a~d~i~iKv~qiGGiTea~kia~lA~~~G~~v~vs 362 (417)
T 3qn3_A 317 EDILREGIIKKMANAVLIKPNQIGTITQTMRTVRLAQRNNYKCVMS 362 (417)
T ss_dssp HHHHHHHHHHTCCSEEEECHHHHCSHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHhCCCCEEEecCCCCCCHHHHHHHHHHHHHcCCeEEEe
Confidence 6666666665334566555555677778889999999999988764
No 377
>2hzg_A Mandelate racemase/muconate lactonizing enzyme/EN superfamily; structural genomics, predicted mandelate racemase, PSI; 2.02A {Rhodobacter sphaeroides}
Probab=25.41 E-value=62 Score=28.30 Aligned_cols=49 Identities=8% Similarity=0.049 Sum_probs=39.5
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEEEe
Q 023191 181 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 229 (286)
Q Consensus 181 ~~d~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~vivD 229 (286)
..+.+++++.+......+|.+.+...|.+.+..+++++|+++|+.++.=
T Consensus 256 ~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~h 304 (401)
T 2hzg_A 256 AHNFHMAQHLMDYGRIGFIQIDCGRIGGLGPAKRVADAAQARGITYVNH 304 (401)
T ss_dssp CSSHHHHHHHHHHSCCSEEEECHHHHTSHHHHHHHHHHHHHHTCEEEEC
T ss_pred cCCHHHHHHHHHCCCCCEEEeCcchhCCHHHHHHHHHHHHHcCCEEecC
Confidence 4578889888877457788877666788888889999999999987754
No 378
>2fc3_A 50S ribosomal protein L7AE; alpha-beta-alpha sandwich, ribosome, RNA binding protein; 1.56A {Aeropyrum pernix} SCOP: d.79.3.1 PDB: 3pla_C* 3id5_C* 3hax_D* 2hvy_D* 3hay_D* 3nvi_B 3nmu_C 3nvk_E* 3lwr_C 3lwo_C* 3lwq_C* 3lwp_C 3lwv_C 3hjw_C* 2czw_A 1pxw_A
Probab=25.40 E-value=97 Score=22.11 Aligned_cols=43 Identities=14% Similarity=0.116 Sum_probs=27.0
Q ss_pred HHHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEE
Q 023191 184 YDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIML 227 (286)
Q Consensus 184 ~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~vi 227 (286)
..+..+.++..+.++|++. ++.....-...|..+|++++++++
T Consensus 33 ~~~v~kal~~gka~lViiA-~D~~~~~~~~~l~~lc~~~~Vp~~ 75 (124)
T 2fc3_A 33 TNETTKAVERGLAKLVVIA-EDVDPPEIVMHLPLLCDEKKIPYV 75 (124)
T ss_dssp HHHHHHHHHTTCCSEEEEE-TTCSSGGGTTTHHHHHHHTTCCEE
T ss_pred HHHHHHHHHcCCceEEEEc-CCCChHHHHHHHHHHHHHcCCCEE
Confidence 4567777777678888884 221111114566778999998654
No 379
>7a3h_A Endoglucanase; hydrolase, cellulose degradation, glycoside H family 5, michaelis complex, SKEW-BOAT, distortion; 0.95A {Bacillus agaradhaerens} SCOP: c.1.8.3 PDB: 1h2j_A* 1hf6_A* 1ocq_A* 1w3k_A* 1h11_A* 4a3h_A* 5a3h_A* 6a3h_A* 1w3l_A 8a3h_A* 2v38_A* 1qhz_A 1qi0_A* 1e5j_A* 1qi2_A* 1h5v_A* 1a3h_A 2a3h_A* 3a3h_A* 1lf1_A
Probab=25.37 E-value=43 Score=27.97 Aligned_cols=22 Identities=5% Similarity=-0.006 Sum_probs=19.1
Q ss_pred CHHHHHHHHHhcCCEEEEeccc
Q 023191 211 DYERIRKVCNKQKAIMLADMAH 232 (286)
Q Consensus 211 ~l~~I~~ia~~~~~~vivD~a~ 232 (286)
-++++++.|+++|++||+|--+
T Consensus 81 ~ld~~v~~a~~~Gi~Vild~H~ 102 (303)
T 7a3h_A 81 KVKEAVEAAIDLDIYVIIDWHI 102 (303)
T ss_dssp HHHHHHHHHHHHTCEEEEEEEC
T ss_pred HHHHHHHHHHHCCCEEEEEecc
Confidence 3788999999999999999754
No 380
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=25.35 E-value=1.3e+02 Score=25.21 Aligned_cols=55 Identities=18% Similarity=0.278 Sum_probs=37.0
Q ss_pred ccCCCCCCCCHHHHHHHhhh---cCCcEEEEcCCC--CC--CccCHHHHHHHHHhc---CCEEEEe
Q 023191 174 RLNESTGYIDYDQLEKSATL---FRPKLIVAGASA--YA--RLYDYERIRKVCNKQ---KAIMLAD 229 (286)
Q Consensus 174 ~~~~~~~~~d~e~l~~~i~~---~~tk~v~i~~~n--~g--~~~~l~~I~~ia~~~---~~~vivD 229 (286)
+++ +++.+|.+.+++.++. .....|+++.++ .. +..+..++.+.+.+. .+.||+=
T Consensus 25 Pf~-~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaG 89 (307)
T 3s5o_A 25 PFT-ATAEVDYGKLEENLHKLGTFPFRGFVVQGSNGEFPFLTSSERLEVVSRVRQAMPKNRLLLAG 89 (307)
T ss_dssp CBC-TTSCBCHHHHHHHHHHHTTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHTSCTTSEEEEE
T ss_pred cCC-CCCCcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHcCCCCcEEEe
Confidence 455 5689999999987753 257788886443 22 444566777777764 5777763
No 381
>3vup_A Beta-1,4-mannanase; TIM barrel, digestive fluid, HYD; 1.05A {Aplysia kurodai}
Probab=25.34 E-value=45 Score=27.45 Aligned_cols=21 Identities=10% Similarity=0.192 Sum_probs=18.1
Q ss_pred CHHHHHHHHHhcCCEEEEecc
Q 023191 211 DYERIRKVCNKQKAIMLADMA 231 (286)
Q Consensus 211 ~l~~I~~ia~~~~~~vivD~a 231 (286)
.++++.++|+++|++||.|.-
T Consensus 91 ~~d~~~~~a~~~Gi~vil~~~ 111 (351)
T 3vup_A 91 DMKDLLDTAKKYNILVFPCLW 111 (351)
T ss_dssp HHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHHHHHHHHHCCCeEEEEec
Confidence 368999999999999998853
No 382
>3gd6_A Muconate cycloisomerase; structural genomics, NYSGXRC, target 9375A, divergent enolase, lyase, PSI-2; 1.60A {Oceanobacillus iheyensis HTE831} PDB: 2oqy_A 3es8_A 3es7_A 3fyy_A 3hpf_A*
Probab=25.30 E-value=54 Score=28.66 Aligned_cols=50 Identities=4% Similarity=-0.059 Sum_probs=40.6
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEEEec
Q 023191 181 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADM 230 (286)
Q Consensus 181 ~~d~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~vivD~ 230 (286)
..+.+++++.+......+|.+.....|.+.+..+|+++|+++|+.++.=+
T Consensus 247 ~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~~~ 296 (391)
T 3gd6_A 247 VWSFKQQQEMIKKDAIDIFNISPVFIGGLTSAKKAAYAAEVASKDVVLGT 296 (391)
T ss_dssp CCCHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEECC
T ss_pred CCCHHHHHHHHHcCCCCEEEECchhcCCHHHHHHHHHHHHHcCCEEEecC
Confidence 45788888888764577887777778888889999999999999887643
No 383
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=25.26 E-value=37 Score=29.20 Aligned_cols=50 Identities=10% Similarity=0.146 Sum_probs=39.4
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEEEec
Q 023191 181 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADM 230 (286)
Q Consensus 181 ~~d~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~vivD~ 230 (286)
..+.+++++.+......+|.+.+...|.+.+..+++++|+++|+.++.=+
T Consensus 249 ~~~~~~~~~~i~~~~~d~v~ik~~~~GGi~~~~~i~~~A~~~g~~~~~~~ 298 (359)
T 1mdl_A 249 WLGPEEMFKALSIGACRLAMPDAMKIGGVTGWIRASALAQQFGIPMSSHL 298 (359)
T ss_dssp CCSHHHHHHHHHTTCCSEECCBTTTTTHHHHHHHHHHHHHHTTCCBCCBS
T ss_pred CCCHHHHHHHHHcCCCCEEeecchhhCCHHHHHHHHHHHHHcCCeEeecc
Confidence 45788888888764567777777778888889999999999998766543
No 384
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=25.23 E-value=1.6e+02 Score=21.40 Aligned_cols=41 Identities=12% Similarity=0.135 Sum_probs=28.7
Q ss_pred HHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEEEecc
Q 023191 185 DQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMA 231 (286)
Q Consensus 185 e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~vivD~a 231 (286)
+-+++++.. ..+.+++.+. . .-+++.++|+++|+-++-+.+
T Consensus 92 ~vv~~~~~~-gi~~i~~~~g---~--~~~~l~~~a~~~Gi~vvGpnc 132 (144)
T 2d59_A 92 EYVEQAIKK-GAKVVWFQYN---T--YNREASKKADEAGLIIVANRC 132 (144)
T ss_dssp HHHHHHHHH-TCSEEEECTT---C--CCHHHHHHHHHTTCEEEESCC
T ss_pred HHHHHHHHc-CCCEEEECCC---c--hHHHHHHHHHHcCCEEEcCCc
Confidence 344555555 7788876522 1 258999999999999887766
No 385
>2poz_A Putative dehydratase; octamer, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics, nysgxrc; 2.04A {Mesorhizobium loti}
Probab=24.92 E-value=49 Score=28.88 Aligned_cols=49 Identities=10% Similarity=0.014 Sum_probs=39.8
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEEEe
Q 023191 181 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 229 (286)
Q Consensus 181 ~~d~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~vivD 229 (286)
..+.+++++.+......+|.+.+...|.+.+..+|+++|+++|+.++.=
T Consensus 259 ~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~h 307 (392)
T 2poz_A 259 VYTRFGFRKIFELQACGIIQPDIGTAGGLMETKKICAMAEAYNMRVAPH 307 (392)
T ss_dssp CCHHHHHHHHHTTTCCSEECCCTTTSSCHHHHHHHHHHHHTTTCEECCC
T ss_pred cCCHHHHHHHHHcCCCCEEecCccccCCHHHHHHHHHHHHHcCCeEecC
Confidence 4568889988876456777776777888889999999999999987763
No 386
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=24.80 E-value=92 Score=25.39 Aligned_cols=50 Identities=6% Similarity=0.156 Sum_probs=37.6
Q ss_pred CCHHHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcC--CEEEEecc
Q 023191 182 IDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQK--AIMLADMA 231 (286)
Q Consensus 182 ~d~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~--~~vivD~a 231 (286)
..++++.+.+.+.++.+|.++...++....+.++.+..++.+ +.|++=++
T Consensus 161 vp~e~l~~~~~~~~~d~V~lS~l~~~~~~~~~~~i~~l~~~~~~~~v~vGG~ 212 (258)
T 2i2x_B 161 VPAEEVLAAVQKEKPIMLTGTALMTTTMYAFKEVNDMLLENGIKIPFACGGG 212 (258)
T ss_dssp CCSHHHHHHHHHHCCSEEEEECCCTTTTTHHHHHHHHHHTTTCCCCEEEEST
T ss_pred CCHHHHHHHHHHcCCCEEEEEeeccCCHHHHHHHHHHHHhcCCCCcEEEECc
Confidence 467888777777799999998666666667888888887754 67777665
No 387
>2zc8_A N-acylamino acid racemase; octamer, TIM beta/alpha-barrel, metal-binding, metal binding; 1.95A {Thermus thermophilus}
Probab=24.59 E-value=56 Score=28.15 Aligned_cols=48 Identities=6% Similarity=0.026 Sum_probs=37.6
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEEE
Q 023191 181 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLA 228 (286)
Q Consensus 181 ~~d~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~viv 228 (286)
..+.+++++.+......+|.+.+...|.+.+..+|+++|+++|+.+++
T Consensus 241 ~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~ 288 (369)
T 2zc8_A 241 LTGAEKARKAIELGAGRVFNVKPARLGGHGESLRVHALAESAGIPLWM 288 (369)
T ss_dssp CCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCCEEE
T ss_pred cCCHHHHHHHHHhCCCCEEEEchhhhCCHHHHHHHHHHHHHcCCcEEe
Confidence 357788888887645777777766678888889999999999998544
No 388
>3zss_A Putative glucanohydrolase PEP1A; alpha-glucan biosynthesis, glycoside hydrolase FA; 1.80A {Streptomyces coelicolor} PDB: 3zst_A* 3zt5_A* 3zt6_A* 3zt7_A*
Probab=24.59 E-value=40 Score=32.19 Aligned_cols=24 Identities=21% Similarity=0.223 Sum_probs=20.8
Q ss_pred ccCHHHHHHHHHhcCCEEEEeccc
Q 023191 209 LYDYERIRKVCNKQKAIMLADMAH 232 (286)
Q Consensus 209 ~~~l~~I~~ia~~~~~~vivD~a~ 232 (286)
..+++++++-||++|+-||.|.+-
T Consensus 320 ~edfk~LV~~aH~~GI~VilD~V~ 343 (695)
T 3zss_A 320 LDDFDHFVTEAGKLGLEIALDFAL 343 (695)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECC
T ss_pred HHHHHHHHHHHHHCCCEEEEEeec
Confidence 446889999999999999999883
No 389
>1vq8_F 50S ribosomal protein L7AE; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: d.79.3.1 PDB: 1vq4_F* 1vq5_F* 1vq6_F* 1vq7_F* 1s72_F* 1vq9_F* 1vqk_F* 1vql_F* 1vqm_F* 1vqn_F* 1vqo_F* 1vqp_F* 1yhq_F* 1yi2_F* 1yij_F* 1yit_F* 1yj9_F* 1yjn_F* 1yjw_F* 2otj_F* ...
Probab=24.55 E-value=1e+02 Score=21.81 Aligned_cols=51 Identities=10% Similarity=0.053 Sum_probs=30.2
Q ss_pred HHHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEE-Eecccccc
Q 023191 184 YDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIML-ADMAHISG 235 (286)
Q Consensus 184 ~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~vi-vD~a~~~g 235 (286)
..+..+.++..+.++|++. ++.....-...|..+|++++++++ ++...-+|
T Consensus 34 ~~~v~kal~~gka~lViiA-~D~~~~~~~~~l~~lc~~~~Vp~~~~~sk~eLG 85 (120)
T 1vq8_F 34 TNETTKSIERGSAELVFVA-EDVQPEEIVMHIPELADEKGVPFIFVEQQDDLG 85 (120)
T ss_dssp HHHHHHHHHHTCCSEEEEE-SCCSSGGGTTTHHHHHHTTCCCEEEESCHHHHH
T ss_pred HHHHHHHHHcCCceEEEEe-CCCChHHHHHHHHHHHHhcCCCEEEECCHHHHH
Confidence 4567777777678888884 221111114566678999998654 44333344
No 390
>3b0z_B Flagellar biosynthetic protein FLHB; type III secretion system, protein transport, MEMB protein; 2.45A {Salmonella enterica subsp}
Probab=30.16 E-value=16 Score=26.16 Aligned_cols=20 Identities=20% Similarity=0.235 Sum_probs=17.8
Q ss_pred HHHHHHHHHhcCCEEEEecc
Q 023191 212 YERIRKVCNKQKAIMLADMA 231 (286)
Q Consensus 212 l~~I~~ia~~~~~~vivD~a 231 (286)
-.+|.++|++||++|+.|-.
T Consensus 29 A~~I~e~A~e~gVPi~e~~~ 48 (114)
T 3b0z_B 29 ALRIREIGAEHRVPTLEAPP 48 (114)
Confidence 46889999999999999975
No 391
>2whl_A Beta-mannanase, baman5; glycoside hydrolase, hydrolase; HET: MAN BMA; 1.40A {Bacillus agaradhaerens} PDB: 2whj_A
Probab=24.25 E-value=46 Score=27.51 Aligned_cols=23 Identities=4% Similarity=0.224 Sum_probs=19.5
Q ss_pred cCHHHHHHHHHhcCCEEEEeccc
Q 023191 210 YDYERIRKVCNKQKAIMLADMAH 232 (286)
Q Consensus 210 ~~l~~I~~ia~~~~~~vivD~a~ 232 (286)
..++++++.|+++|++||+|--+
T Consensus 64 ~~ld~~v~~a~~~Gi~Vild~H~ 86 (294)
T 2whl_A 64 DTIREVIELAEQNKMVAVVEVHD 86 (294)
T ss_dssp HHHHHHHHHHHTTTCEEEEEECT
T ss_pred HHHHHHHHHHHHCCCEEEEEecc
Confidence 34789999999999999999654
No 392
>2qde_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-II, NYSGXRC, enolase, structural genomics, protei structure initiative, PSI-2; 1.93A {Azoarcus SP}
Probab=24.18 E-value=54 Score=28.64 Aligned_cols=50 Identities=6% Similarity=-0.041 Sum_probs=40.4
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEEEec
Q 023191 181 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADM 230 (286)
Q Consensus 181 ~~d~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~vivD~ 230 (286)
..+.+++++.+......+|.+.+...|.+.+..+|+++|+++|+.++.=+
T Consensus 249 ~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~ 298 (397)
T 2qde_A 249 AQELHDLLAIINKGAADGLMIKTQKAGGLLKAQRWLTLARLANLPVICGC 298 (397)
T ss_dssp CCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHHTCCEEECC
T ss_pred cCCHHHHHHHHHcCCCCEEEEeccccCCHHHHHHHHHHHHHcCCeEEEec
Confidence 45788888888764577888776668888889999999999999877764
No 393
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=24.11 E-value=1.4e+02 Score=21.78 Aligned_cols=46 Identities=7% Similarity=0.076 Sum_probs=31.4
Q ss_pred HHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEEEeccccccccc
Q 023191 185 DQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVA 238 (286)
Q Consensus 185 e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~ 238 (286)
+-+++++.. .++.+++..+ .. -+++.++|+++|+-++-+.+ .|.+.
T Consensus 85 ~v~~~~~~~-g~~~i~i~~~---~~--~~~l~~~a~~~Gi~~igpnc--~g~~~ 130 (145)
T 2duw_A 85 GVAQEAIAI-GAKTLWLQLG---VI--NEQAAVLAREAGLSVVMDRC--PAIEL 130 (145)
T ss_dssp HHHHHHHHH-TCCEEECCTT---CC--CHHHHHHHHTTTCEEECSCC--HHHHS
T ss_pred HHHHHHHHc-CCCEEEEcCC---hH--HHHHHHHHHHcCCEEEcCCe--eeEEc
Confidence 334445554 7888877532 21 68999999999999987766 55554
No 394
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=23.95 E-value=2.2e+02 Score=24.62 Aligned_cols=55 Identities=5% Similarity=0.051 Sum_probs=35.4
Q ss_pred ccCCCCCCCCHHHHHHHhhh---cCCcEEEEcCCC--CC--CccCHHHHHHHHHhc---CCEEEEe
Q 023191 174 RLNESTGYIDYDQLEKSATL---FRPKLIVAGASA--YA--RLYDYERIRKVCNKQ---KAIMLAD 229 (286)
Q Consensus 174 ~~~~~~~~~d~e~l~~~i~~---~~tk~v~i~~~n--~g--~~~~l~~I~~ia~~~---~~~vivD 229 (286)
+++ +++.+|.+.+++.++. .....|+++.++ .. +..+-.++.+.+.+. .+.||+=
T Consensus 70 PF~-~dg~ID~~al~~lv~~li~~Gv~Gl~v~GTTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaG 134 (360)
T 4dpp_A 70 PYL-PDGRFDLEAYDDLVNIQIQNGAEGVIVGGTTGEGQLMSWDEHIMLIGHTVNCFGGSIKVIGN 134 (360)
T ss_dssp CBC-TTSSBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEE
T ss_pred cCC-CCCCcCHHHHHHHHHHHHHcCCCEEEecccccChhhCCHHHHHHHHHHHHHHhCCCCeEEEe
Confidence 455 5789999999987642 367888886443 22 344455666665543 5788863
No 395
>1tkk_A Similar to chloromuconate cycloisomerase; epimerase, enolase super family,; 2.10A {Bacillus subtilis} SCOP: c.1.11.2 d.54.1.1 PDB: 1jpm_A
Probab=23.92 E-value=57 Score=28.07 Aligned_cols=49 Identities=10% Similarity=-0.031 Sum_probs=39.4
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEEEe
Q 023191 181 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 229 (286)
Q Consensus 181 ~~d~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~vivD 229 (286)
..+.+++++.+......+|.+.+...|.+.+..+++++|+++|+.+++=
T Consensus 247 ~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~ 295 (366)
T 1tkk_A 247 VFTPRQAFEVLQTRSADLINIKLMKAGGISGAEKINAMAEACGVECMVG 295 (366)
T ss_dssp CCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHHTCCEEEC
T ss_pred CCCHHHHHHHHHhCCCCEEEeehhhhcCHHHHHHHHHHHHHcCCcEEec
Confidence 4578888888876457788777666788888999999999999977654
No 396
>3eez_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, unknown function, PSI-2, protein structure initiative; 2.80A {Silicibacter pomeroyi}
Probab=23.82 E-value=68 Score=27.87 Aligned_cols=50 Identities=10% Similarity=0.027 Sum_probs=40.4
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEEEec
Q 023191 181 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADM 230 (286)
Q Consensus 181 ~~d~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~vivD~ 230 (286)
..+.+++++.+......+|.+.....|.+.+..+|+++|+++|+.+.+=+
T Consensus 246 ~~~~~~~~~~l~~~~~d~v~ik~~~~GGit~~~~ia~~A~~~g~~~~~~~ 295 (378)
T 3eez_A 246 LVTLQDAARVARDGLAEVFGIKLNRVGGLTRAARMRDIALTHGIDMFVMA 295 (378)
T ss_dssp CCSHHHHHHHHHTTCCSEEEEEHHHHTSHHHHHHHHHHHHHTTCEEEEEC
T ss_pred CCCHHHHHHHHHcCCCCEEEeCchhcCCHHHHHHHHHHHHHcCCEEEcCC
Confidence 45788888888764577887777777888889999999999999987543
No 397
>1wue_A Mandelate racemase/muconate lactonizing enzyme FA protein; structural genomics, unknown function, nysgxrc target T2185; 2.10A {Enterococcus faecalis} SCOP: c.1.11.2 d.54.1.1
Probab=23.81 E-value=74 Score=27.67 Aligned_cols=49 Identities=8% Similarity=0.076 Sum_probs=38.8
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEEEe
Q 023191 181 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 229 (286)
Q Consensus 181 ~~d~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~vivD 229 (286)
..+..++++.+......+|.+.+...|.+.+..+|+++|+++|+.+++=
T Consensus 261 ~~~~~~~~~~i~~~a~d~i~ik~~~~GGit~~~~i~~~A~~~gi~~~~~ 309 (386)
T 1wue_A 261 IRSLKDCQVALALGSCRSINLKIPRVGGIHEALKIAAFCQENDLLVWLG 309 (386)
T ss_dssp CCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEEC
T ss_pred cCCHHHHHHHHHcCCCCEEEEchhhhCCHHHHHHHHHHHHHCCCeEEEC
Confidence 3467888888876346777776666788888999999999999988764
No 398
>1ivn_A Thioesterase I; hydrolase, protease; 1.90A {Escherichia coli} SCOP: c.23.10.5 PDB: 1u8u_A* 1j00_A* 1jrl_A 1v2g_A*
Probab=23.52 E-value=1.1e+02 Score=22.80 Aligned_cols=63 Identities=10% Similarity=0.039 Sum_probs=31.5
Q ss_pred eeEEEecccCCCCCCCCHHHHHH-------HhhhcCCcEEEEc---CCCCCC--ccC-HHHHHHHHHhcCCEEEEec
Q 023191 167 FFETMPYRLNESTGYIDYDQLEK-------SATLFRPKLIVAG---ASAYAR--LYD-YERIRKVCNKQKAIMLADM 230 (286)
Q Consensus 167 ~~~~v~~~~~~~~~~~d~e~l~~-------~i~~~~tk~v~i~---~~n~g~--~~~-l~~I~~ia~~~~~~vivD~ 230 (286)
.+.++.+..+.-....+.+++.+ .+++.++++++++ |++.+. ... -+.+.++|+++++.+ +|.
T Consensus 64 d~Vii~~G~ND~~~~~~~~~~~~~l~~li~~~~~~~~~vil~~~~~p~~~~~~~~~~~n~~~~~~a~~~~v~~-iD~ 139 (190)
T 1ivn_A 64 RWVLVELGGNDGLRGFQPQQTEQTLRQILQDVKAANAEPLLMQIRLPANYGRRYNEAFSAIYPKLAKEFDVPL-LPF 139 (190)
T ss_dssp SEEEEECCTTTTSSSCCHHHHHHHHHHHHHHHHHTTCEEEEECCCCCGGGCHHHHHHHHHHHHHHHHHTTCCE-ECC
T ss_pred CEEEEEeeccccccCCCHHHHHHHHHHHHHHHHHcCCCEEEEeccCCcchhHHHHHHHHHHHHHHHHHcCCeE-Ecc
Confidence 35555555542112345554433 3333357777775 333331 111 235678888888654 464
No 399
>1tvn_A Cellulase, endoglucanase G; glycoside hydrolase, CLAN GH-A, family 5-2; 1.41A {Pseudoalteromonas haloplanktis} SCOP: c.1.8.3 PDB: 1tvp_A*
Probab=23.45 E-value=52 Score=27.14 Aligned_cols=21 Identities=5% Similarity=0.184 Sum_probs=18.1
Q ss_pred HHHHHHHHHhcCCEEEEeccc
Q 023191 212 YERIRKVCNKQKAIMLADMAH 232 (286)
Q Consensus 212 l~~I~~ia~~~~~~vivD~a~ 232 (286)
++++++.|.++|++||+|--+
T Consensus 81 ld~~v~~a~~~Gi~vild~h~ 101 (293)
T 1tvn_A 81 LDTVVNAAIAEDMYVIIDFHS 101 (293)
T ss_dssp HHHHHHHHHHTTCEEEEEEEC
T ss_pred HHHHHHHHHHCCCEEEEEcCC
Confidence 568899999999999999643
No 400
>3jug_A Beta-mannanase; TIM-barrel, glycosidase, hydrolase; 1.60A {Bacillus}
Probab=23.40 E-value=48 Score=28.50 Aligned_cols=25 Identities=4% Similarity=0.227 Sum_probs=20.7
Q ss_pred ccCHHHHHHHHHhcCCEEEEecccc
Q 023191 209 LYDYERIRKVCNKQKAIMLADMAHI 233 (286)
Q Consensus 209 ~~~l~~I~~ia~~~~~~vivD~a~~ 233 (286)
...++++++.|+++|++||+|--+.
T Consensus 86 l~~ld~~v~~a~~~GiyVIlDlH~~ 110 (345)
T 3jug_A 86 IDTVREVIELAEQNKMVAVVEVHDA 110 (345)
T ss_dssp HHHHHHHHHHHHTTTCEEEEEECTT
T ss_pred HHHHHHHHHHHHHCCCEEEEEeccC
Confidence 3457899999999999999997644
No 401
>3o85_A Ribosomal protein L7AE; alpha beta sandwich fold, K-turn RNA binding protein, KINK T ribosomal protein; 1.81A {Giardia lamblia}
Probab=23.21 E-value=1.1e+02 Score=21.74 Aligned_cols=50 Identities=12% Similarity=0.166 Sum_probs=30.8
Q ss_pred HHHHHHHhhhcCCcEEEEcCCCCCCccC-HHHHHHHHHhcCCEEE-Eecccccc
Q 023191 184 YDQLEKSATLFRPKLIVAGASAYARLYD-YERIRKVCNKQKAIML-ADMAHISG 235 (286)
Q Consensus 184 ~e~l~~~i~~~~tk~v~i~~~n~g~~~~-l~~I~~ia~~~~~~vi-vD~a~~~g 235 (286)
..+..+.++..+.++|++...-.+ .. ...|..+|++++++++ ++...-+|
T Consensus 36 ~~~v~kai~~gka~lViiA~D~~p--~~~~~~l~~lc~~~~VP~~~v~sk~eLG 87 (122)
T 3o85_A 36 ANEALKQVNRGKAELVIIAADADP--IEIVLHLPLACEDKGVPYVFIGSKNALG 87 (122)
T ss_dssp HHHHHHHHHTTCCSEEEEETTCSS--GGGGTTHHHHHHTTTCCEEEESCHHHHH
T ss_pred HHHHHHHHHcCCceEEEEeCCCCh--HHHHHHHHHHHHHhCCCEEEECCHHHHH
Confidence 566777887767899988421111 12 3567778999999644 44333344
No 402
>1g01_A Endoglucanase; alpha/beta barrel, TIM barrel, hydrolase; 1.90A {Bacillus SP} SCOP: c.1.8.3 PDB: 1g0c_A*
Probab=23.02 E-value=52 Score=28.28 Aligned_cols=22 Identities=5% Similarity=-0.103 Sum_probs=19.4
Q ss_pred CHHHHHHHHHhcCCEEEEeccc
Q 023191 211 DYERIRKVCNKQKAIMLADMAH 232 (286)
Q Consensus 211 ~l~~I~~ia~~~~~~vivD~a~ 232 (286)
-++++++.|+++|++||+|--+
T Consensus 91 ~ld~~v~~a~~~Gi~VIld~H~ 112 (364)
T 1g01_A 91 LVYEGIELAFEHDMYVIVDWHV 112 (364)
T ss_dssp HHHHHHHHHHHTTCEEEEEEEC
T ss_pred HHHHHHHHHHHCCCEEEEEecc
Confidence 4788999999999999999765
No 403
>4dxk_A Mandelate racemase / muconate lactonizing enzyme protein; enolase, mandelate racemase subgroup, enzyme function initia EFI; 1.25A {Agrobacterium tumefaciens} PDB: 4dx3_A 2pod_A
Probab=23.02 E-value=85 Score=27.47 Aligned_cols=49 Identities=6% Similarity=-0.068 Sum_probs=40.4
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEEEe
Q 023191 181 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 229 (286)
Q Consensus 181 ~~d~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~vivD 229 (286)
..+.+++++++......+|.+.....|.+.+..+|+++|+.+|+.+..-
T Consensus 270 ~~~~~~~~~~l~~~a~d~v~~d~~~~GGit~~~kia~~A~~~gi~~~~h 318 (400)
T 4dxk_A 270 LGSRWAFRDLLETGAAGVVMLDISWCGGLSEARKIASMAEAWHLPVAPH 318 (400)
T ss_dssp CCHHHHHHHHHHTTCCCEEEECTTTTTHHHHHHHHHHHHHHTTCCEEEC
T ss_pred cCCHHHHHHHHHcCCCCEEEeCccccCCHHHHHHHHHHHHHcCCEEEec
Confidence 4577888888876457888887888888889999999999999987663
No 404
>1bqc_A Protein (beta-mannanase); glycosyl hydrolase, family 5, thermomonospora fusca; 1.50A {Thermobifida fusca} SCOP: c.1.8.3 PDB: 2man_A* 3man_A*
Probab=23.00 E-value=53 Score=27.21 Aligned_cols=21 Identities=14% Similarity=0.488 Sum_probs=18.6
Q ss_pred CHHHHHHHHHhcCCEEEEecc
Q 023191 211 DYERIRKVCNKQKAIMLADMA 231 (286)
Q Consensus 211 ~l~~I~~ia~~~~~~vivD~a 231 (286)
.++++++.|+++|++||+|--
T Consensus 66 ~ld~~v~~a~~~Gi~Vild~h 86 (302)
T 1bqc_A 66 DVANVISLCKQNRLICMLEVH 86 (302)
T ss_dssp HHHHHHHHHHHTTCEEEEEEG
T ss_pred HHHHHHHHHHHCCCEEEEEec
Confidence 478999999999999999954
No 405
>3fcp_A L-Ala-D/L-Glu epimerase, A muconate lactonizing enzyme; structural genomics, nysgrc,target 9450E, PSI-2; 1.80A {Klebsiella pneumoniae subsp}
Probab=22.96 E-value=87 Score=27.19 Aligned_cols=50 Identities=4% Similarity=-0.207 Sum_probs=39.9
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEEEec
Q 023191 181 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADM 230 (286)
Q Consensus 181 ~~d~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~vivD~ 230 (286)
..+..++++.+...-..+|.+.+...|.+.+..+|+++|+++|+.++.=+
T Consensus 253 ~~~~~~~~~~~~~~a~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~~~ 302 (381)
T 3fcp_A 253 VATAYDGYQLAQQGFTGAYALKIAKAGGPNSVLALARVAQAAGIGLYGGT 302 (381)
T ss_dssp CCSHHHHHHHHHTTCCSEEEECHHHHTSTTHHHHHHHHHHHHTCEEEECC
T ss_pred cCCHHHHHHHHHcCCCCEEEecccccCCHHHHHHHHHHHHHcCCceecCC
Confidence 45788888888763567777776678888899999999999999887643
No 406
>3rjt_A Lipolytic protein G-D-S-L family; PSI-biology, midwest center for structural genomics, MCSG, H; 1.50A {Alicyclobacillus acidocaldarius subsp}
Probab=22.90 E-value=1.6e+02 Score=22.13 Aligned_cols=47 Identities=11% Similarity=0.099 Sum_probs=26.0
Q ss_pred CHHHHHHHhhhcCCcEEEEcCCCCCCc------cC----HHHHHHHHHhcCCEEEEec
Q 023191 183 DYDQLEKSATLFRPKLIVAGASAYARL------YD----YERIRKVCNKQKAIMLADM 230 (286)
Q Consensus 183 d~e~l~~~i~~~~tk~v~i~~~n~g~~------~~----l~~I~~ia~~~~~~vivD~ 230 (286)
+++.+.+.+++.+.++|++++...+.. .. -+.+.++|+++++. ++|.
T Consensus 118 ~l~~~i~~~~~~~~~vil~~p~~~~~~~~~~~~~~~~~~n~~~~~~a~~~~~~-~vD~ 174 (216)
T 3rjt_A 118 TLRHLVATTKPRVREMFLLSPFYLEPNRSDPMRKTVDAYIEAMRDVAASEHVP-FVDV 174 (216)
T ss_dssp HHHHHHHHHGGGSSEEEEECCCCCCCCTTSHHHHHHHHHHHHHHHHHHHHTCC-EECH
T ss_pred HHHHHHHHHHhcCCeEEEECCCcCCCCcchHHHHHHHHHHHHHHHHHHHcCCe-EEEc
Confidence 345555555554677887763332211 11 33567778888854 5565
No 407
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=22.80 E-value=1.3e+02 Score=24.27 Aligned_cols=52 Identities=12% Similarity=0.109 Sum_probs=38.3
Q ss_pred cCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEEE
Q 023191 175 LNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLA 228 (286)
Q Consensus 175 ~~~~~~~~d~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~viv 228 (286)
.| ++...+.+.++++... .+.+|.+..+..-+...+.++.+.+++++++++.
T Consensus 18 ~D-Pdk~~~~~~l~~~~~~-GtDaI~vGgs~gvt~~~~~~~v~~ik~~~~Piil 69 (235)
T 3w01_A 18 LD-PAKHISDDDLDAICMS-QTDAIMIGGTDDVTEDNVIHLMSKIRRYPLPLVL 69 (235)
T ss_dssp EC-TTSCCCHHHHHHHHTS-SCSEEEECCSSCCCHHHHHHHHHHHTTSCSCEEE
T ss_pred EC-CCCcCCHHHHHHHHHc-CCCEEEECCcCCcCHHHHHHHHHHhcCcCCCEEE
Confidence 45 3456678888886655 7999999865533566788888888889888876
No 408
>3mwc_A Mandelate racemase/muconate lactonizing protein; enolase, structural genomics, protein structure initiative, nysgrc; 1.80A {Kosmotoga olearia}
Probab=22.45 E-value=78 Score=27.76 Aligned_cols=50 Identities=14% Similarity=0.045 Sum_probs=38.4
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEEEec
Q 023191 181 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADM 230 (286)
Q Consensus 181 ~~d~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~vivD~ 230 (286)
..+.+++++.+......+|.+.+...|.+.+..+|+++|+++|+.+++=+
T Consensus 264 ~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~~~ 313 (400)
T 3mwc_A 264 LISSRVAEFVAKLGISNIWNIKIQRVGGLLEAIKIYKIATDNGIKLWGGT 313 (400)
T ss_dssp CCSHHHHHHHHHTTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEECC
T ss_pred cCCHHHHHHHHhcCCCCEEEEcchhhCCHHHHHHHHHHHHHcCCEEEecC
Confidence 34677777777653567777766667888889999999999999987654
No 409
>2ptz_A Enolase; lyase, glycolysis,His-TAG; 1.65A {Trypanosoma brucei} SCOP: c.1.11.1 d.54.1.1 PDB: 2ptx_A 2pty_A* 2ptw_A 2pu0_A 2pu1_A* 1oep_A
Probab=22.44 E-value=80 Score=28.08 Aligned_cols=48 Identities=4% Similarity=0.064 Sum_probs=32.0
Q ss_pred CCHHHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEEEe
Q 023191 182 IDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 229 (286)
Q Consensus 182 ~d~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~vivD 229 (286)
.+.+++++.+...-..+|.+.....|.+.+..+++++|+++|+.+++=
T Consensus 326 ~~~~~~~~~i~~~a~d~i~ik~~~~GGitea~~i~~lA~~~g~~v~~~ 373 (432)
T 2ptz_A 326 TNTERIKMAIEKKACNSLLLKINQIGTISEAIASSKLCMENGWSVMVS 373 (432)
T ss_dssp TCHHHHHHHHHTTCCSEEEECHHHHCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred CCHHHHHHHHHcCCCCEEEecccccCCHHHHHHHHHHHHHcCCeEEec
Confidence 355556655554234555555444667777889999999999988653
No 410
>1k4i_A 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesi antimicrobial target, structure-based design, isomerase; 0.98A {Magnaporthe grisea} SCOP: d.115.1.2 PDB: 1k49_A 1k4l_A 1k4o_A 1k4p_A
Probab=22.41 E-value=1.1e+02 Score=24.79 Aligned_cols=22 Identities=0% Similarity=-0.079 Sum_probs=19.3
Q ss_pred CCccCHHHHHHHHHhcCCEEEE
Q 023191 207 ARLYDYERIRKVCNKQKAIMLA 228 (286)
Q Consensus 207 g~~~~l~~I~~ia~~~~~~viv 228 (286)
|......++.++|++||+.++.
T Consensus 191 G~mar~~~l~~fA~~h~L~iit 212 (233)
T 1k4i_A 191 PGMLRGDECVAFARRWGLKVCT 212 (233)
T ss_dssp CEECCHHHHHHHHHHTTCEEEE
T ss_pred CCcCCHHHHHHHHHHcCCcEEE
Confidence 6777899999999999998775
No 411
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=22.34 E-value=1.1e+02 Score=26.62 Aligned_cols=43 Identities=9% Similarity=0.025 Sum_probs=36.2
Q ss_pred CHHHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEEEe
Q 023191 183 DYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 229 (286)
Q Consensus 183 d~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~vivD 229 (286)
+.+++++.+......+|.+. |.+.+..+|+++|+++|+.+++=
T Consensus 254 ~~~~~~~~i~~~~~d~v~ik----GGit~a~~i~~~A~~~gi~~~~~ 296 (389)
T 2oz8_A 254 DLQGKRLLLEAHAADILNVH----GQVTDVMRIGWLAAELGIPISIG 296 (389)
T ss_dssp CHHHHHHHHHTTCCSEEEEC----SCHHHHHHHHHHHHHHTCCEEEC
T ss_pred CHHHHHHHHHcCCCCEEEEC----cCHHHHHHHHHHHHHcCCeEeec
Confidence 89999999877457788776 88888899999999999977665
No 412
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=22.28 E-value=2.6e+02 Score=22.34 Aligned_cols=40 Identities=10% Similarity=0.089 Sum_probs=25.3
Q ss_pred CHHHHHHHhhhcCCcEEEEcCCC-CC---CccCHHHHHHHHHhcCC
Q 023191 183 DYDQLEKSATLFRPKLIVAGASA-YA---RLYDYERIRKVCNKQKA 224 (286)
Q Consensus 183 d~e~l~~~i~~~~tk~v~i~~~n-~g---~~~~l~~I~~ia~~~~~ 224 (286)
|.+.+++++. +...|+.+... .. .......+.+.|++.++
T Consensus 55 d~~~l~~~~~--~~d~vi~~a~~~~~~~~~~~~~~~l~~aa~~~gv 98 (289)
T 3e48_A 55 NQESMVEAFK--GMDTVVFIPSIIHPSFKRIPEVENLVYAAKQSGV 98 (289)
T ss_dssp CHHHHHHHTT--TCSEEEECCCCCCSHHHHHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHh--CCCEEEEeCCCCccchhhHHHHHHHHHHHHHcCC
Confidence 7888888876 46677665222 11 12335677888888875
No 413
>2gdq_A YITF; mandelate racemase/muconate lactonizing enzyme, TIM-barrel, octamer, structural genomics, PSI; 1.80A {Bacillus subtilis subsp} SCOP: c.1.11.2 d.54.1.1 PDB: 2gge_A
Probab=22.21 E-value=63 Score=28.06 Aligned_cols=49 Identities=6% Similarity=-0.094 Sum_probs=39.4
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEEEe
Q 023191 181 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 229 (286)
Q Consensus 181 ~~d~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~vivD 229 (286)
..+.+++++.+......+|.+.+...|.+.+..+++++|+++|+.++.=
T Consensus 245 ~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~ 293 (382)
T 2gdq_A 245 MKGPAQYVPLLSQRCLDIIQPDVMHVNGIDEFRDCLQLARYFGVRASAH 293 (382)
T ss_dssp CCSHHHHHHHHHTTCCSEECCCTTTTTHHHHHHHHHHHHHHHTCEECCC
T ss_pred cCCHHHHHHHHHcCCCCEEecCccccCCHHHHHHHHHHHHHcCCEEeec
Confidence 4578889988876456777776777888888999999999999987665
No 414
>3i6e_A Muconate cycloisomerase I; structural genomics, NYSGXRC, targer 9468A, muconate lactonizing enzyme, PSI-2, protein structure initiative; 1.70A {Ruegeria pomeroyi} PDB: 3i6t_A
Probab=22.21 E-value=81 Score=27.43 Aligned_cols=50 Identities=4% Similarity=-0.058 Sum_probs=38.5
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEEEec
Q 023191 181 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADM 230 (286)
Q Consensus 181 ~~d~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~vivD~ 230 (286)
..+.+++++.+......+|.+.+...|.+.+..+|+++|+++|+.++.-+
T Consensus 252 ~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~i~~~A~~~gi~~~~~~ 301 (385)
T 3i6e_A 252 VYGPEDMVRAAHEGICDGVSIKIMKSGGLTRAQTVARIAAAHGLMAYGGD 301 (385)
T ss_dssp CCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEECC
T ss_pred cCCHHHHHHHHHcCCCCEEEecccccCCHHHHHHHHHHHHHcCCEEEeCC
Confidence 34677788777664567777766667888888999999999999987643
No 415
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=22.12 E-value=2e+02 Score=22.76 Aligned_cols=28 Identities=18% Similarity=0.154 Sum_probs=19.7
Q ss_pred EEeCCChH-HHHHHHHHhcCCCCeEEecc
Q 023191 116 VQSLSGSP-SNFQVYTALLKPHDRIMALD 143 (286)
Q Consensus 116 v~~~sG~~-a~~~~l~a~~~~Gd~Vl~~~ 143 (286)
+++|-|+. .=.++...+.+.|-+|++.+
T Consensus 10 ~lVTGas~gIG~aia~~l~~~G~~V~~~~ 38 (257)
T 3tpc_A 10 FIVTGASSGLGAAVTRMLAQEGATVLGLD 38 (257)
T ss_dssp EEEESTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred EEEeCCCCHHHHHHHHHHHHCCCEEEEEe
Confidence 66665555 33447788888999988875
No 416
>2o56_A Putative mandelate racemase; dehydratase, structural genomics, protein structure initiati 2; 2.00A {Salmonella typhimurium}
Probab=22.11 E-value=49 Score=28.98 Aligned_cols=49 Identities=4% Similarity=-0.121 Sum_probs=39.9
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEEEe
Q 023191 181 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 229 (286)
Q Consensus 181 ~~d~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~vivD 229 (286)
..+.+++++.+......+|.+.+...|.+.+..+|+++|+++|+.++.=
T Consensus 275 ~~~~~~~~~~i~~~~~d~v~ik~~~~GGite~~~i~~~A~~~g~~~~~h 323 (407)
T 2o56_A 275 IYWRWGYRPFLENGSLSVIQPDICTCGGITEVKKICDMAHVYDKTVQIH 323 (407)
T ss_dssp CCHHHHHHHHHHTTCCSEECCCTTTTTHHHHHHHHHHHHHTTTCEECCC
T ss_pred cCCHHHHHHHHHcCCCCEEecCccccCCHHHHHHHHHHHHHcCCeEeec
Confidence 4478899998877456777777777888888999999999999987763
No 417
>4hty_A Cellulase; (alpha/beta)8 barrel, family 5 endoglucanase, hydrolase; 2.00A {Uncultured bacterium} PDB: 4hu0_A*
Probab=22.01 E-value=56 Score=28.02 Aligned_cols=21 Identities=10% Similarity=0.022 Sum_probs=18.6
Q ss_pred CHHHHHHHHHhcCCEEEEecc
Q 023191 211 DYERIRKVCNKQKAIMLADMA 231 (286)
Q Consensus 211 ~l~~I~~ia~~~~~~vivD~a 231 (286)
.++++++.|+++|++||+|--
T Consensus 122 ~ld~~v~~a~~~Gi~Vild~H 142 (359)
T 4hty_A 122 LLDQVVAWNNELGIYTILDWH 142 (359)
T ss_dssp HHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHHHCCCEEEEEcC
Confidence 468999999999999999964
No 418
>3ozy_A Putative mandelate racemase; beta-alpha barrel, enolase superfamily member, M-xylarate, U function; HET: DXL; 1.30A {Bordetella bronchiseptica} PDB: 3ozm_A* 3h12_A 3op2_A*
Probab=22.01 E-value=74 Score=27.72 Aligned_cols=49 Identities=8% Similarity=-0.048 Sum_probs=39.6
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEEEe
Q 023191 181 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 229 (286)
Q Consensus 181 ~~d~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~vivD 229 (286)
..+.+++++.+......+|.+.....|.+.+..+|+++|+++|+.++.=
T Consensus 256 i~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~ia~~A~~~gi~~~~h 304 (389)
T 3ozy_A 256 LYTRNAFNDYIRNDAIDVLQADASRAGGITEALAISASAASAHLAWNPH 304 (389)
T ss_dssp CCHHHHHHHHHHTTCCSEECCCTTTSSCHHHHHHHHHHHHHTTCEECCC
T ss_pred CCCHHHHHHHHHcCCCCEEEeCccccCCHHHHHHHHHHHHHcCCEEEec
Confidence 4567888888876456777777777888889999999999999987754
No 419
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=21.89 E-value=3e+02 Score=22.75 Aligned_cols=100 Identities=14% Similarity=0.026 Sum_probs=52.1
Q ss_pred EEeCCChH--HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhh
Q 023191 116 VQSLSGSP--SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATL 193 (286)
Q Consensus 116 v~~~sG~~--a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~ 193 (286)
|++|.|+. +.. +...+++.|.+|.+..-.-.+. +...-. ...+....+..+..++ -|.+.+.+++.+
T Consensus 13 IlVtGatG~iG~~-l~~~L~~~g~~V~~l~R~~~~~--~~~~~~--~~~l~~~~v~~~~~Dl------~d~~~l~~~~~~ 81 (346)
T 3i6i_A 13 VLIAGATGFIGQF-VATASLDAHRPTYILARPGPRS--PSKAKI--FKALEDKGAIIVYGLI------NEQEAMEKILKE 81 (346)
T ss_dssp EEEECTTSHHHHH-HHHHHHHTTCCEEEEECSSCCC--HHHHHH--HHHHHHTTCEEEECCT------TCHHHHHHHHHH
T ss_pred EEEECCCcHHHHH-HHHHHHHCCCCEEEEECCCCCC--hhHHHH--HHHHHhCCcEEEEeec------CCHHHHHHHHhh
Confidence 66654433 433 7777877787777664221110 000000 0001111233343232 378999999985
Q ss_pred cCCcEEEEcCCCCCCccCHHHHHHHHHhcC-CEEE
Q 023191 194 FRPKLIVAGASAYARLYDYERIRKVCNKQK-AIML 227 (286)
Q Consensus 194 ~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~-~~vi 227 (286)
.++.+|+.+... ........+.+.|++.+ +..+
T Consensus 82 ~~~d~Vi~~a~~-~n~~~~~~l~~aa~~~g~v~~~ 115 (346)
T 3i6i_A 82 HEIDIVVSTVGG-ESILDQIALVKAMKAVGTIKRF 115 (346)
T ss_dssp TTCCEEEECCCG-GGGGGHHHHHHHHHHHCCCSEE
T ss_pred CCCCEEEECCch-hhHHHHHHHHHHHHHcCCceEE
Confidence 567777765211 12233568889999888 6433
No 420
>2gl5_A Putative dehydratase protein; structural genomics, protein structure initiati nysgxrc; 1.60A {Salmonella typhimurium} SCOP: c.1.11.2 d.54.1.1 PDB: 4e6m_A*
Probab=21.83 E-value=54 Score=28.77 Aligned_cols=49 Identities=4% Similarity=-0.116 Sum_probs=39.7
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEEEe
Q 023191 181 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 229 (286)
Q Consensus 181 ~~d~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~vivD 229 (286)
..+.+++++.+......+|.+.+...|.+.+..+|+++|+++|+.++.=
T Consensus 278 ~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~ia~~A~~~gi~~~~h 326 (410)
T 2gl5_A 278 SYTRWGYRELLEKQSIAVAQPDLCLCGGITEGKKICDYANIYDTTVQVH 326 (410)
T ss_dssp CCTTHHHHHHHHTTCCSEECCCTTTTTHHHHHHHHHHHHHTTTCEECCC
T ss_pred cCCHHHHHHHHHcCCCCEEecCccccCCHHHHHHHHHHHHHcCCeEeec
Confidence 4478889998877456777776777888888999999999999987764
No 421
>3uj2_A Enolase 1; enzyme function initiative, EFI, lyase; 2.00A {Anaerostipes caccae}
Probab=21.77 E-value=68 Score=28.79 Aligned_cols=47 Identities=11% Similarity=0.049 Sum_probs=32.1
Q ss_pred CHHHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEEEe
Q 023191 183 DYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 229 (286)
Q Consensus 183 d~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~vivD 229 (286)
++.++++.+...-..+|.+.....|.+.+..+++++|+++|+.+++=
T Consensus 344 n~~~~~~~i~~~a~d~i~iKv~~iGGiTea~kia~lA~~~Gi~~~v~ 390 (449)
T 3uj2_A 344 NTERLNKGIKERCGNSILIKLNQIGTVSETLEAIKMAHKAGYTAVVS 390 (449)
T ss_dssp CHHHHHHHHHTTCCSEEEECHHHHCSHHHHHHHHHHHHHTTCEEEEE
T ss_pred CHHHHHHHHHcCCCCEEEECccccCCHHHHHHHHHHHHHcCCeEEEe
Confidence 46666666654234555555545667777889999999999987753
No 422
>3aie_A Glucosyltransferase-SI; beta-alpha-barrels; HET: MES; 2.10A {Streptococcus mutans} PDB: 3aic_A* 3aib_A*
Probab=21.68 E-value=48 Score=32.42 Aligned_cols=24 Identities=17% Similarity=0.131 Sum_probs=20.9
Q ss_pred CccCHHHHHHHHHhcCCEEEEecc
Q 023191 208 RLYDYERIRKVCNKQKAIMLADMA 231 (286)
Q Consensus 208 ~~~~l~~I~~ia~~~~~~vivD~a 231 (286)
+..+++++++-||++|+-||.|.+
T Consensus 691 t~~df~~lv~~~H~~GI~VilD~V 714 (844)
T 3aie_A 691 TADDLVKAIKALHSKGIKVMADWV 714 (844)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEc
Confidence 445688899999999999999988
No 423
>4dwd_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, EFI, enzyme function initiative, metal protein; HET: MSE; 1.50A {Paracoccus denitrificans} PDB: 3n4e_A*
Probab=21.63 E-value=63 Score=28.30 Aligned_cols=51 Identities=2% Similarity=-0.020 Sum_probs=41.7
Q ss_pred CCCCHHHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEEEecc
Q 023191 180 GYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMA 231 (286)
Q Consensus 180 ~~~d~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~vivD~a 231 (286)
...+.+++++++... ..+|.+.....|.+.+..+|+++|+++|+.+..-+.
T Consensus 250 ~~~~~~~~~~~i~~~-~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~~ 300 (393)
T 4dwd_A 250 QTYTLQALKDLILSG-VRMVQPDIVKMGGITGMMQCAALAHAHGVEFVPHQT 300 (393)
T ss_dssp TCCSHHHHHHHHHHT-CCEECCCTTTTTHHHHHHHHHHHHHHHTCEECCCCC
T ss_pred CcCCHHHHHHHHHcC-CCEEEeCccccCCHHHHHHHHHHHHHcCCEEeecCC
Confidence 345788999988885 777777777788888899999999999998876654
No 424
>1egz_A Endoglucanase Z, EGZ, CEL5; glycosyl hydrolase, CLAN GH-A, family 5-2, cellulase; 2.30A {Erwinia chrysanthemi} SCOP: c.1.8.3
Probab=21.60 E-value=59 Score=26.70 Aligned_cols=21 Identities=10% Similarity=0.099 Sum_probs=17.9
Q ss_pred CHHHHHHHHHhcCCEEEEecc
Q 023191 211 DYERIRKVCNKQKAIMLADMA 231 (286)
Q Consensus 211 ~l~~I~~ia~~~~~~vivD~a 231 (286)
.++++++.|+++|++||+|--
T Consensus 78 ~ld~~v~~a~~~Gi~vild~h 98 (291)
T 1egz_A 78 KVERVVDAAIANDMYAIIGWH 98 (291)
T ss_dssp HHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHHHHHHHHHCCCEEEEEcC
Confidence 356789999999999999963
No 425
>2j9r_A Thymidine kinase; TK1, DNK, lasso, transferase, ATP-binding, deoxyribonucleoside kinase, DNA synthesis, phosphate accept nucleotide-binding; HET: THM; 2.7A {Bacillus anthracis} PDB: 2ja1_A*
Probab=21.57 E-value=1.1e+02 Score=24.38 Aligned_cols=33 Identities=9% Similarity=0.053 Sum_probs=20.9
Q ss_pred CCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEEE
Q 023191 195 RPKLIVAGASAYARLYDYERIRKVCNKQKAIMLA 228 (286)
Q Consensus 195 ~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~viv 228 (286)
+..+|++...++.....++.+.+++.+ ++.||+
T Consensus 101 ~~dvViIDEaQF~~~~~V~~l~~l~~~-~~~Vi~ 133 (214)
T 2j9r_A 101 EMDVIAIDEVQFFDGDIVEVVQVLANR-GYRVIV 133 (214)
T ss_dssp SCCEEEECCGGGSCTTHHHHHHHHHHT-TCEEEE
T ss_pred CCCEEEEECcccCCHHHHHHHHHHhhC-CCEEEE
Confidence 467888876665434446666666654 777775
No 426
>3otr_A Enolase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel, TIM barrel; 2.75A {Toxoplasma gondii}
Probab=21.47 E-value=91 Score=27.97 Aligned_cols=48 Identities=6% Similarity=-0.068 Sum_probs=35.3
Q ss_pred CCHHHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEEEe
Q 023191 182 IDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 229 (286)
Q Consensus 182 ~d~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~vivD 229 (286)
-++.++++.+...-..+|.+-....|.+.+.-+++++|+++|..+++=
T Consensus 335 Tn~~~i~~~Ie~~a~n~IlIKvnQIGgITEalka~~lA~~~G~~vmvs 382 (452)
T 3otr_A 335 TNILRIEKALKDKACNCLLLKVNQIGSVTEAIEACLLAQKSGWGVQVS 382 (452)
T ss_dssp TCHHHHHHHHHHTCCSEEEECHHHHCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred CCHHHHHHHHhcCCCCEEEeeccccccHHHHHHHHHHHHHcCCeEEEe
Confidence 367777777766345666665555777888889999999999987764
No 427
>3dgb_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding, isomeras structural genomics, PSI-2; HET: MUC; 1.70A {Pseudomonas fluorescens} PDB: 3ct2_A* 3fj4_A* 1muc_A 1bkh_A 3muc_A 2muc_A 1f9c_A
Probab=21.36 E-value=83 Score=27.33 Aligned_cols=50 Identities=4% Similarity=-0.154 Sum_probs=40.2
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEEEec
Q 023191 181 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADM 230 (286)
Q Consensus 181 ~~d~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~vivD~ 230 (286)
..+..++++.+......+|.+.+...|.+.+..+|+++|+++|+.++.-+
T Consensus 254 ~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~i~~~A~~~gi~~~~~~ 303 (382)
T 3dgb_A 254 IECVEDAFNLAREGAASVFALKIAKNGGPRATLRTAAIAEAAGIGLYGGT 303 (382)
T ss_dssp CSSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHHTCEEEECC
T ss_pred cCCHHHHHHHHHcCCCCEEEecccccCCHHHHHHHHHHHHHcCCeEeecC
Confidence 45788888888764567777777778888899999999999999887643
No 428
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=21.29 E-value=1.5e+02 Score=25.32 Aligned_cols=56 Identities=9% Similarity=0.040 Sum_probs=35.1
Q ss_pred ccCCCCCCCCHHHHHHHhh---hcCCcEEEEcCCC--CC--CccCHHHHHHHHHhc---CCEEEEec
Q 023191 174 RLNESTGYIDYDQLEKSAT---LFRPKLIVAGASA--YA--RLYDYERIRKVCNKQ---KAIMLADM 230 (286)
Q Consensus 174 ~~~~~~~~~d~e~l~~~i~---~~~tk~v~i~~~n--~g--~~~~l~~I~~ia~~~---~~~vivD~ 230 (286)
+++ +++.+|++.+++.++ +.....|+++.++ .. +..+..++.+.+.+. .+.||+=.
T Consensus 42 PF~-~dg~ID~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGv 107 (343)
T 2v9d_A 42 IFT-ADGQLDKPGTAALIDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFAIDHVDRRVPVLIGT 107 (343)
T ss_dssp CBC-TTSSBCHHHHHHHHHHHHHTTCSCEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEC
T ss_pred CCC-CCCCcCHHHHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEec
Confidence 454 568999999988765 2267778776443 22 344555666666553 46777543
No 429
>2csu_A 457AA long hypothetical protein; structural genomics, PH0766, riken ST genomics/proteomics initiative, RSGI, NPPSFA; 2.20A {Pyrococcus horikoshii} SCOP: c.2.1.8 c.23.4.1 c.23.4.1
Probab=21.18 E-value=1.3e+02 Score=26.79 Aligned_cols=51 Identities=12% Similarity=0.152 Sum_probs=34.8
Q ss_pred HHHHHHHhhhcCCcEEEEcCCCCCCccC-----HHHHHHHHHhcCCEEEEecccccccc
Q 023191 184 YDQLEKSATLFRPKLIVAGASAYARLYD-----YERIRKVCNKQKAIMLADMAHISGLV 237 (286)
Q Consensus 184 ~e~l~~~i~~~~tk~v~i~~~n~g~~~~-----l~~I~~ia~~~~~~vivD~a~~~g~~ 237 (286)
++.+++++.. .+|.+++-+..++...+ -+++.++|+++|+.++=+.+ .|.+
T Consensus 78 ~~~v~e~~~~-Gi~~vv~~s~G~~e~g~~g~~~~~~l~~~a~~~g~~viGPnc--~Gv~ 133 (457)
T 2csu_A 78 KDTLIQCGEK-GVKGVVIITAGFGETGEEGKREEKELVEIAHKYGMRIIGPNC--VGIM 133 (457)
T ss_dssp HHHHHHHHHH-TCCEEEECCCSSTTSCHHHHHHHHHHHHHHHHHTCEEECSSC--CEEE
T ss_pred HHHHHHHHHc-CCCEEEEecCCCCccccccHHHHHHHHHHHHHcCCEEEcCCc--ceEE
Confidence 4566677766 88887765444442222 56899999999999887766 4544
No 430
>2bhu_A Maltooligosyltrehalose trehalohydrolase; alpha-amylase, protein-carbohydrate complex, desiccation resistance; HET: TRS PGE; 1.1A {Deinococcus radiodurans} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 2bhy_A* 2bhz_A* 2bxy_A* 2bxz_A* 2by0_A* 2by1_A* 2by2_A* 2by3_A*
Probab=21.12 E-value=44 Score=31.19 Aligned_cols=24 Identities=13% Similarity=0.113 Sum_probs=20.8
Q ss_pred CccCHHHHHHHHHhcCCEEEEecc
Q 023191 208 RLYDYERIRKVCNKQKAIMLADMA 231 (286)
Q Consensus 208 ~~~~l~~I~~ia~~~~~~vivD~a 231 (286)
+..+++++++-||++|+-||.|.+
T Consensus 191 t~~d~~~lv~~~H~~Gi~VilD~V 214 (602)
T 2bhu_A 191 RPEDLMALVDAAHRLGLGVFLDVV 214 (602)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEec
Confidence 344688999999999999999987
No 431
>3fv9_G Mandelate racemase/muconate lactonizing enzyme; structural genomics, mandelate racemase/muconatelactonizing hydrolase, PSI-2; 1.90A {Roseovarius nubinhibens ism} PDB: 2pce_A
Probab=21.08 E-value=81 Score=27.46 Aligned_cols=50 Identities=10% Similarity=-0.100 Sum_probs=40.2
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEEEec
Q 023191 181 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADM 230 (286)
Q Consensus 181 ~~d~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~vivD~ 230 (286)
..+.+++++++......+|.+.+...|.+.+..+|+++|+++|+.+.+=.
T Consensus 252 ~~~~~~~~~~~~~~a~d~v~~k~~~~GGit~~~~i~~~A~~~gi~~~~~~ 301 (386)
T 3fv9_G 252 IQTETDLIAAIRDDLCDGVGLKVSKQGGITPMLRQRAIAAAAGMVMSVQD 301 (386)
T ss_dssp CCSHHHHHHHHHTTCCSEEEEEHHHHTSHHHHHHHHHHHHHTTCEEEEEC
T ss_pred cCCHHHHHHHHHhCCCCEEEECccccCCHHHHHHHHHHHHHcCCEEEeCC
Confidence 45788888888764577787777778888889999999999999987543
No 432
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=20.88 E-value=1.6e+02 Score=21.25 Aligned_cols=43 Identities=14% Similarity=0.013 Sum_probs=28.4
Q ss_pred HHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEEEecccccccc
Q 023191 187 LEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLV 237 (286)
Q Consensus 187 l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~ 237 (286)
+++++.. .++.+++..+. .-+++.++|+++|+.++-+.+ .|.+
T Consensus 86 ~~~~~~~-g~~~i~~~~~~-----~~~~l~~~a~~~Gi~~igpnc--~g~~ 128 (138)
T 1y81_A 86 AKEAVEA-GFKKLWFQPGA-----ESEEIRRFLEKAGVEYSFGRC--IMVE 128 (138)
T ss_dssp HHHHHHT-TCCEEEECTTS-----CCHHHHHHHHHHTCEEECSCC--HHHH
T ss_pred HHHHHHc-CCCEEEEcCcc-----HHHHHHHHHHHCCCEEEcCCc--ceEE
Confidence 3444443 67777775432 258999999999998775554 5544
No 433
>3ucq_A Amylosucrase; thermostability, amylose synthesis, sucrose isomerization, beta/alpha-barrel, carbohydrate binding, transferase; 1.97A {Deinococcus geothermalis} PDB: 3uer_A*
Probab=20.85 E-value=44 Score=31.51 Aligned_cols=27 Identities=7% Similarity=0.197 Sum_probs=23.4
Q ss_pred CCCCccCHHHHHHHHHhcCCEEEEecc
Q 023191 205 AYARLYDYERIRKVCNKQKAIMLADMA 231 (286)
Q Consensus 205 n~g~~~~l~~I~~ia~~~~~~vivD~a 231 (286)
.+|+..+++++++-||++|+-||.|.+
T Consensus 156 ~~Gt~~d~~~lv~~~h~~Gi~Vi~D~V 182 (655)
T 3ucq_A 156 DLGTMDDLSALARALRGRGISLVLDLV 182 (655)
T ss_dssp GGCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cCCCHHHHHHHHHHHHHCCCEEEEEee
Confidence 356677899999999999999999987
No 434
>2pcq_A Putative dihydrodipicolinate synthase; lyase, lysine biosynthesis, dihydrodipicoliante, S genomics, NPPSFA; 2.10A {Thermus thermophilus}
Probab=20.76 E-value=48 Score=27.56 Aligned_cols=53 Identities=11% Similarity=0.080 Sum_probs=34.2
Q ss_pred ccCCCCCCCCHHHHHHHhh---hcCCcEEEEcCCC--CC--CccCHHHHHHHHHhcCCEEEEe
Q 023191 174 RLNESTGYIDYDQLEKSAT---LFRPKLIVAGASA--YA--RLYDYERIRKVCNKQKAIMLAD 229 (286)
Q Consensus 174 ~~~~~~~~~d~e~l~~~i~---~~~tk~v~i~~~n--~g--~~~~l~~I~~ia~~~~~~vivD 229 (286)
+++ +++.+|.+.+++.++ +. ...++++.++ .. +..+..++.+.+.+ .+.||+=
T Consensus 9 Pf~-~dg~iD~~~l~~lv~~li~~-v~gl~v~GttGE~~~Ls~~Er~~v~~~~~~-rvpviaG 68 (283)
T 2pcq_A 9 PFD-REGRLDEEAFRELAQALEPL-VDGLLVYGSNGEGVHLTPEERARGLRALRP-RKPFLVG 68 (283)
T ss_dssp CBC-TTCCBCHHHHHHHHHHHGGG-SSCCEETCTTTTGGGSCHHHHHHHHHTCCC-SSCCEEE
T ss_pred CCC-CCCCcCHHHHHHHHHHHHhh-CCEEEECCcCcCchhcCHHHHHHHHHHHHh-CCcEEEe
Confidence 344 568999999988775 34 6677776443 22 33445567777666 6777754
No 435
>3tqp_A Enolase; energy metabolism, lyase; 2.20A {Coxiella burnetii}
Probab=20.69 E-value=73 Score=28.35 Aligned_cols=47 Identities=15% Similarity=0.065 Sum_probs=31.2
Q ss_pred CHHHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEEEe
Q 023191 183 DYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 229 (286)
Q Consensus 183 d~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~vivD 229 (286)
++.++++.+...-..+|.+.....|.+.+..+++++|+++|+.+++=
T Consensus 318 ~~~~~~~~i~~~a~d~i~iKv~~iGGiTealkia~lA~~~G~~~~v~ 364 (428)
T 3tqp_A 318 NPDILEKGIKKNIANAILVKLNQIGTLTETLATVGLAKSNKYGVIIS 364 (428)
T ss_dssp CHHHHHHHHHTTCCSEEEECHHHHCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred CHHHHHHHHHhCCCCEEEecccccCCHHHHHHHHHHHHHcCCeEEEe
Confidence 45555555554234455554444667777889999999999987753
No 436
>2cks_A Endoglucanase E-5; carbohydrate metabolism, polysaccharide degradation, glycoside hydrolase family 5, hydrolase, glycosidase; HET: BEN; 1.6A {Thermobifida fusca} PDB: 2ckr_A*
Probab=20.63 E-value=60 Score=27.00 Aligned_cols=21 Identities=5% Similarity=0.167 Sum_probs=18.2
Q ss_pred CHHHHHHHHHhcCCEEEEecc
Q 023191 211 DYERIRKVCNKQKAIMLADMA 231 (286)
Q Consensus 211 ~l~~I~~ia~~~~~~vivD~a 231 (286)
-++++++.|+++|++||+|--
T Consensus 81 ~ld~~v~~a~~~Gl~vild~h 101 (306)
T 2cks_A 81 RMHQLIDMATARGLYVIVDWH 101 (306)
T ss_dssp HHHHHHHHHHTTTCEEEEEEE
T ss_pred HHHHHHHHHHHCCCEEEEEec
Confidence 467889999999999999964
No 437
>3rr1_A GALD, putative D-galactonate dehydratase; enolase, magnesium binding site, lyase; 1.95A {Ralstonia pickettii} PDB: 3rra_A
Probab=20.44 E-value=82 Score=27.68 Aligned_cols=50 Identities=4% Similarity=0.012 Sum_probs=40.8
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEEEec
Q 023191 181 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADM 230 (286)
Q Consensus 181 ~~d~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~vivD~ 230 (286)
..+.+++++++......+|.+.....|.+.+..+|+++|+++|+.+..=+
T Consensus 238 i~~~~~~~~~l~~~a~d~v~~d~~~~GGitea~kia~lA~~~gi~v~~h~ 287 (405)
T 3rr1_A 238 MFSRFDFKRVLEAGGVSILQPDLSHAGGITECVKIAAMAEAYDVALAPHC 287 (405)
T ss_dssp CCSHHHHHHHHHHCCCSEECCBTTTTTHHHHHHHHHHHHHTTTCEECCBC
T ss_pred cCCHHHHHHHHHHhCCCeEEEChhhcCCHHHHHHHHHHHHHcCCEEEeCC
Confidence 45788899888774567777777778888899999999999999877644
No 438
>1m7x_A 1,4-alpha-glucan branching enzyme; alpha/beta barrel, beta sandwich, transferase; 2.30A {Escherichia coli} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 3o7y_A* 3o7z_A*
Probab=20.40 E-value=47 Score=31.08 Aligned_cols=24 Identities=8% Similarity=0.077 Sum_probs=20.9
Q ss_pred CccCHHHHHHHHHhcCCEEEEecc
Q 023191 208 RLYDYERIRKVCNKQKAIMLADMA 231 (286)
Q Consensus 208 ~~~~l~~I~~ia~~~~~~vivD~a 231 (286)
+..+++++++-||++|+-||.|.+
T Consensus 203 t~~~~~~lv~~~H~~Gi~VilD~V 226 (617)
T 1m7x_A 203 TRDDFRYFIDAAHAAGLNVILDWV 226 (617)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEe
Confidence 345688999999999999999988
No 439
>3ro6_B Putative chloromuconate cycloisomerase; TIM barrel; 2.20A {Methylococcus capsulatus} PDB: 3rit_A
Probab=20.37 E-value=75 Score=27.26 Aligned_cols=50 Identities=8% Similarity=-0.077 Sum_probs=40.9
Q ss_pred CCCHHHHHHHhhhc-CCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEEEec
Q 023191 181 YIDYDQLEKSATLF-RPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADM 230 (286)
Q Consensus 181 ~~d~e~l~~~i~~~-~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~vivD~ 230 (286)
..+.+++++.+... ...+|.+.+...|.+.+..+|+++|+++|+.++.-+
T Consensus 244 ~~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~i~~~a~~~gi~~~~~~ 294 (356)
T 3ro6_B 244 LLGPADAFALAAPPAACGIFNIKLMKCGGLAPARRIATIAETAGIDLMWGC 294 (356)
T ss_dssp CCSHHHHHHHHSSSCSCSEEEECHHHHCSHHHHHHHHHHHHHHTCEEEECC
T ss_pred CCCHHHHHHHHhcCCcCCEEEEcccccCCHHHHHHHHHHHHHcCCEEEecC
Confidence 45788899888864 477887777778888889999999999999988754
No 440
>3qld_A Mandelate racemase/muconate lactonizing protein; structural genomics, PSI-2, isomerase; HET: MSE; 1.85A {Alicyclobacillus acidocaldarius LAA1}
Probab=20.29 E-value=94 Score=27.08 Aligned_cols=50 Identities=10% Similarity=-0.001 Sum_probs=38.5
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEEEec
Q 023191 181 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADM 230 (286)
Q Consensus 181 ~~d~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~vivD~ 230 (286)
..+..++++++...-..+|.+.+...|.+.+..+|+++|+++|+.+++=.
T Consensus 249 ~~~~~~~~~~~~~~a~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~~~ 298 (388)
T 3qld_A 249 VRSVRELKLTARLGAARVLNVKPGRLGGFGATLRALDVAGEAGMAAWVGG 298 (388)
T ss_dssp CCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEECC
T ss_pred CCCHHHHHHHHHcCCCCEEEECchhhCCHHHHHHHHHHHHHCCCeEEecC
Confidence 34677777777663467777766667888889999999999999987643
No 441
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=20.27 E-value=2.2e+02 Score=23.53 Aligned_cols=56 Identities=14% Similarity=0.238 Sum_probs=34.8
Q ss_pred ccCCCCCCCCHHHHHHHhh---hcCCcEEEEcCCC--CC--CccCHHHHHHHHHhc---CCEEEEecc
Q 023191 174 RLNESTGYIDYDQLEKSAT---LFRPKLIVAGASA--YA--RLYDYERIRKVCNKQ---KAIMLADMA 231 (286)
Q Consensus 174 ~~~~~~~~~d~e~l~~~i~---~~~tk~v~i~~~n--~g--~~~~l~~I~~ia~~~---~~~vivD~a 231 (286)
+++ +++ +|++.+++.++ +.....++++.++ .. +..+..++.+.+.+. .+.||+=..
T Consensus 13 Pf~-~dg-iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvi~Gvg 78 (291)
T 3a5f_A 13 PFT-NTG-VDFDKLSELIEWHIKSKTDAIIVCGTTGEATTMTETERKETIKFVIDKVNKRIPVIAGTG 78 (291)
T ss_dssp CBC-SSS-BCHHHHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECC
T ss_pred CcC-CCC-cCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCC
Confidence 455 457 99999988765 2367888886443 22 344555666666553 467775433
No 442
>3m07_A Putative alpha amylase; IDP00968, csgid, structural genomics, center for structural genomics of infectious diseases, unknown function; HET: BTB PG4 PGE; 1.40A {Salmonella enterica subsp}
Probab=20.08 E-value=56 Score=30.63 Aligned_cols=23 Identities=9% Similarity=0.130 Sum_probs=20.4
Q ss_pred ccCHHHHHHHHHhcCCEEEEecc
Q 023191 209 LYDYERIRKVCNKQKAIMLADMA 231 (286)
Q Consensus 209 ~~~l~~I~~ia~~~~~~vivD~a 231 (286)
..+++++++-||++|+-||.|.+
T Consensus 202 ~~~~~~lv~~~H~~Gi~VilD~V 224 (618)
T 3m07_A 202 PDDFKAFIDAAHGYGLSVVLDIV 224 (618)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHHHHHCCCEEEEeec
Confidence 34588999999999999999987
No 443
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=20.04 E-value=1.9e+02 Score=23.20 Aligned_cols=29 Identities=10% Similarity=0.006 Sum_probs=20.3
Q ss_pred eEEeCCChH-HHHHHHHHhcCCCCeEEecc
Q 023191 115 NVQSLSGSP-SNFQVYTALLKPHDRIMALD 143 (286)
Q Consensus 115 ~v~~~sG~~-a~~~~l~a~~~~Gd~Vl~~~ 143 (286)
.+++|.|+. .=.++...+++.|.+|++..
T Consensus 7 ~vlVTGas~gIG~~~a~~l~~~G~~V~~~~ 36 (281)
T 3m1a_A 7 VWLVTGASSGFGRAIAEAAVAAGDTVIGTA 36 (281)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEe
Confidence 366665555 33447788888999998765
Done!