Query 023195
Match_columns 286
No_of_seqs 270 out of 1263
Neff 7.0
Searched_HMMs 46136
Date Fri Mar 29 09:09:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023195.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/023195hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1965 Sodium/hydrogen exchan 100.0 3.4E-48 7.4E-53 376.5 12.3 274 1-283 273-565 (575)
2 KOG1966 Sodium/hydrogen exchan 100.0 3.1E-48 6.8E-53 375.7 -0.2 230 2-267 276-506 (670)
3 TIGR00840 b_cpa1 sodium/hydrog 100.0 2E-44 4.4E-49 358.3 15.2 231 2-268 244-475 (559)
4 TIGR00831 a_cpa1 Na+/H+ antipo 100.0 2.1E-29 4.5E-34 249.9 19.6 190 2-194 215-412 (525)
5 COG0025 NhaP NhaP-type Na+/H+ 99.9 1.1E-25 2.4E-30 218.3 18.6 179 2-194 231-410 (429)
6 COG3263 NhaP-type Na+/H+ and K 99.9 8E-22 1.7E-26 186.4 14.2 169 2-196 227-395 (574)
7 PRK05326 potassium/proton anti 99.9 7.6E-21 1.6E-25 190.3 18.2 169 2-196 229-397 (562)
8 TIGR00844 c_cpa1 na(+)/h(+) an 99.8 2.9E-18 6.2E-23 174.4 16.5 171 2-186 249-436 (810)
9 PF00999 Na_H_Exchanger: Sodiu 99.3 8.4E-13 1.8E-17 125.5 2.2 162 2-188 219-380 (380)
10 KOG4505 Na+/H+ antiporter [Ino 98.4 5.4E-07 1.2E-11 84.0 7.2 169 3-186 250-431 (467)
11 PRK03659 glutathione-regulated 98.0 0.00031 6.7E-09 71.5 17.9 119 4-147 224-343 (601)
12 PRK03562 glutathione-regulated 97.7 0.0012 2.6E-08 67.5 14.9 121 2-146 225-345 (621)
13 PRK10669 putative cation:proto 97.6 0.003 6.6E-08 63.6 16.8 141 8-177 239-379 (558)
14 PLN03159 cation/H(+) antiporte 97.5 0.005 1.1E-07 65.1 17.1 123 4-147 280-402 (832)
15 COG0475 KefB Kef-type K+ trans 97.3 0.018 3.9E-07 55.8 17.3 160 3-191 229-389 (397)
16 TIGR00932 2a37 transporter, mo 95.6 0.043 9.3E-07 50.0 7.5 61 2-69 212-272 (273)
17 TIGR00844 c_cpa1 na(+)/h(+) an 91.4 12 0.00026 39.7 16.8 71 2-72 23-93 (810)
18 PF02667 SCFA_trans: Short cha 76.3 75 0.0016 31.6 13.4 26 46-71 51-76 (453)
19 TIGR00773 NhaA Na+/H+ antiport 64.3 1E+02 0.0022 29.9 11.2 111 13-132 213-326 (373)
20 PRK14853 nhaA pH-dependent sod 54.7 2.2E+02 0.0049 28.0 19.3 122 5-132 215-345 (423)
21 PLN03159 cation/H(+) antiporte 53.8 3.1E+02 0.0067 29.4 15.5 70 2-71 52-125 (832)
22 PF09446 VMA21: VMA21-like dom 53.8 13 0.00028 26.7 2.5 33 1-33 15-61 (66)
23 PF11712 Vma12: Endoplasmic re 48.4 44 0.00095 27.5 5.3 20 48-67 81-100 (142)
24 KOG1650 Predicted K+/H+-antipo 42.8 3E+02 0.0065 29.3 11.5 154 5-192 267-423 (769)
25 COG4651 RosB Kef-type K+ trans 41.3 18 0.0004 34.2 2.1 59 7-72 238-296 (408)
26 PRK03659 glutathione-regulated 35.1 4.3E+02 0.0093 27.1 11.1 69 2-76 14-82 (601)
27 PF15176 LRR19-TM: Leucine-ric 35.1 1.7E+02 0.0036 23.1 6.1 32 160-192 17-49 (102)
28 PRK03562 glutathione-regulated 32.7 5.7E+02 0.012 26.3 15.8 69 2-76 14-82 (621)
29 KOG2290 Rhomboid family protei 32.3 1.7E+02 0.0036 29.4 7.0 32 45-77 538-569 (652)
30 PF03601 Cons_hypoth698: Conse 29.1 4.8E+02 0.01 24.4 13.5 31 2-32 7-41 (305)
31 PRK10669 putative cation:proto 28.5 6.2E+02 0.013 25.4 15.9 65 2-72 15-79 (558)
32 TIGR00366 conserved hypothetic 26.7 6.4E+02 0.014 25.0 16.0 27 45-71 47-73 (438)
33 TIGR00783 ccs citrate carrier 25.7 6E+02 0.013 24.4 9.9 67 3-71 186-256 (347)
34 COG2855 Predicted membrane pro 22.2 7E+02 0.015 23.9 11.7 161 4-195 19-184 (334)
35 COG3671 Predicted membrane pro 21.4 4E+02 0.0086 21.7 6.2 26 42-67 63-88 (125)
36 COG4791 EscT Type III secretor 20.4 6.5E+02 0.014 23.2 8.2 42 92-149 11-52 (259)
No 1
>KOG1965 consensus Sodium/hydrogen exchanger protein [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.4e-48 Score=376.48 Aligned_cols=274 Identities=43% Similarity=0.644 Sum_probs=222.6
Q ss_pred ChhHHHHHHHHHHhhccchHHHHHHHHHHhccccccCCChhhHHHHHHHHHHHHHHHHHHHHHHHhhcchhhhhhhhccC
Q 023195 1 MVLMAYLSYMLAELFYLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHTFATLSFVAEIFIFLYVGMDALDIEKWRFVKG 80 (286)
Q Consensus 1 mll~aylsY~lAE~l~~SGIlAvv~~Gi~m~~y~~~nls~~s~~~~~~f~~~ls~l~e~~IF~~lGl~~~~~~~w~~~~~ 80 (286)
|++++|.+|++||.+|+|||+||++|||+|+||+++|+|+++|.++||+|++++|++|++||+|+|+++++.++|.+.
T Consensus 273 ~ll~sY~sY~lAE~~~lSGIvtVlFcGI~msHYt~~NlS~~Sqit~kh~f~~lsflAEtfIF~Y~Gl~~f~~~k~~~~-- 350 (575)
T KOG1965|consen 273 MLLMSYLSYLLAEGCGLSGIVTVLFCGIVMSHYTYHNLSGESQITTKHFFRTLSFLAETFIFIYLGLSAFDFQKHVYK-- 350 (575)
T ss_pred HHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhcccceeee--
Confidence 689999999999999999999999999999999999999999999999999999999999999999999999888653
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCC-CCCCCchhhhhhhhcccchhHHHHHHHhhhhhccCCCcccc
Q 023195 81 SPGTSVAASAMLMGLIMAGRAAFVFPLSFLTNLAKKSP-TEKISIKQQVIIWWAGLMRGAVSMALAYNQFTRSGHTQLRE 159 (286)
Q Consensus 81 ~~~~~~~~~~~~~~~~lv~R~l~V~~~~~l~n~~~~~~-~~~i~~~~~~ii~w~GLmRGavslaLA~~~~~~~~~~~~~~ 159 (286)
++.+..++.++|+++|++.|||++.+.|+.||.+ ..+++.|+|.+|||+|+||||+++|||+....+.+. ..
T Consensus 351 ----~~~fv~~~~vlV~lgRa~nvfPLs~L~N~~rr~k~~~~i~~~~q~~~~w~g~lRGAvs~ALa~~~~~~~~~---~~ 423 (575)
T KOG1965|consen 351 ----SLQFVFGAGVLVLLGRAANVFPLSFLLNLFRRHKECDLIDDKYQVIMWWAGGLRGAVSFALALGDFTDSPH---TG 423 (575)
T ss_pred ----chHHHHHHHHHHHHHHHHHhccHHHHHHHHhccccccccChHHhhHhHhhhhhhHHHHHHHHhhhcccccc---cc
Confidence 2233456678899999999999999999998643 345999999999999955999999999987543221 14
Q ss_pred hhHHHHHHHHHHHHHHhhhhhcHHHHHHHhCCCCCCCCCcc-----------------CCCCCCCCCcccccccccccC-
Q 023195 160 NAIMITSTITVVLFSTVVFGLMTKPLIRLLLPHPKHTTNHI-----------------LSDPSTPKSLSQPLLEEGQQD- 221 (286)
Q Consensus 160 ~~~i~~~t~~vVl~S~lv~G~t~~pl~~~L~~~~~~~~~~~-----------------~~~~~~~~~~~~~ll~~~~~~- 221 (286)
+++|+++|..||++|+++.|.++.|++++|.++.+...... ....+.+++.+.+.....+..
T Consensus 424 ~q~i~tttl~vVlfT~lv~Gg~T~pml~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~S~~i~~~~~~~~~~ 503 (575)
T KOG1965|consen 424 GQTIFTTTLVVVLFTVLVFGGSTKPMLSYLMISVGVAADEVDESWRLEPGVEFYLVTKLGVLSLTSSAYITILQLRQAEL 503 (575)
T ss_pred ccEEEEeeeeeeeeeeeeeCCccHHHHHHhcccccccccccchhhhccccccccccccccccccccccCcchhhhhhhhh
Confidence 68999999999999999999999999999998765433100 001112334444432221110
Q ss_pred CcCCCCCCCCCCCCcccccccCCcchhhchHhhhhccccccccCCCCCCcCCCCCCCccCCC
Q 023195 222 SYADLGGPTVPRPGSLRALLTTPTHTVHYYWRKFDDAFMRPVFGGRGFAPFVPGSPTERSVR 283 (286)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~fd~~ymrp~f~~~~~~~~~~~~~~~~~~~ 283 (286)
.+|+...++.+++.+.+....++++..|.+||++|+..+++.+++||.+|..|..|.+...+
T Consensus 504 ~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 565 (575)
T KOG1965|consen 504 FDEPTRSSDSRFLLSLGFFQLTYTSLTHLYGRIFSRTSMRHIFGQRGLVPLKPNPPIRKLPN 565 (575)
T ss_pred ccccCCccCccccccccceeeeecccccccccccCcchhcccccccCcccCCCCcccccCCc
Confidence 03333333456778899999999999999999999999999999999999999999876543
No 2
>KOG1966 consensus Sodium/hydrogen exchanger protein [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.1e-48 Score=375.72 Aligned_cols=230 Identities=28% Similarity=0.526 Sum_probs=210.7
Q ss_pred hhHHHHHHHHHHhhccchHHHHHHHHHHhccccccCCChhhHHHHHHHHHHHHHHHHHHHHHHHhhcchhhh-hhhhccC
Q 023195 2 VLMAYLSYMLAELFYLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHTFATLSFVAEIFIFLYVGMDALDIE-KWRFVKG 80 (286)
Q Consensus 2 ll~aylsY~lAE~l~~SGIlAvv~~Gi~m~~y~~~nls~~s~~~~~~f~~~ls~l~e~~IF~~lGl~~~~~~-~w~~~~~ 80 (286)
+++||++|+.||.+|+|||+|+++||+.|++|...|+++++..+.++|.+++|..+|++||+++|+++.+.. +|++
T Consensus 276 f~~pYlaYL~aEm~hlSgIlAii~CG~~m~~Yv~~Nis~~s~~tvky~~K~lss~sEt~IF~fLGvs~v~~~h~wd~--- 352 (670)
T KOG1966|consen 276 FLLPYLAYLTAEMFHLSGILAIIFCGLCMKKYVEANISQKSATTVKYFMKMLSSLSETVIFMFLGVSTVSSNHHWDF--- 352 (670)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHhccchhhheeehhhhcCCcceeeh---
Confidence 689999999999999999999999999999999999999999999999999999999999999999998763 5653
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCCchhhhhhhhcccchhHHHHHHHhhhhhccCCCcccch
Q 023195 81 SPGTSVAASAMLMGLIMAGRAAFVFPLSFLTNLAKKSPTEKISIKQQVIIWWAGLMRGAVSMALAYNQFTRSGHTQLREN 160 (286)
Q Consensus 81 ~~~~~~~~~~~~~~~~lv~R~l~V~~~~~l~n~~~~~~~~~i~~~~~~ii~w~GLmRGavslaLA~~~~~~~~~~~~~~~ 160 (286)
.+.++++++|++.|+++|+.+++++|.+| ..|+++.||++|+++|| ||||+++|.+.++ +...|.+
T Consensus 353 ------~Fi~~T~~fc~~~R~lgv~~lt~~~N~fr---~~k~~~~DQfimsyGGL-RGAiaF~LV~lid----~~~vp~K 418 (670)
T KOG1966|consen 353 ------AFICLTLVFCLIYRAIGVVVLTWFLNKFR---MVKLEFVDQFIMSYGGL-RGAIAFGLVVLID----GAKVPAK 418 (670)
T ss_pred ------hhhhhHHHHHHHHHHHHhhhhhhhhhhhh---eeeccccceeeeecCCc-chhhheeEEEEec----cccCCcc
Confidence 34467889999999999999999999987 47999999999999998 9999999999875 2468999
Q ss_pred hHHHHHHHHHHHHHHhhhhhcHHHHHHHhCCCCCCCCCccCCCCCCCCCcccccccccccCCcCCCCCCCCCCCCccccc
Q 023195 161 AIMITSTITVVLFSTVVFGLMTKPLIRLLLPHPKHTTNHILSDPSTPKSLSQPLLEEGQQDSYADLGGPTVPRPGSLRAL 240 (286)
Q Consensus 161 ~~i~~~t~~vVl~S~lv~G~t~~pl~~~L~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (286)
++++++|++||+||+++||+|++|+++||++++++. .+++..|++|.+++|+.++| +||++|+
T Consensus 419 ~~Fvttti~VIfFTVflQGiTIkplvk~L~Vk~~~~-----~~~~m~e~i~~~~~dhlm~g-IEDi~G~----------- 481 (670)
T KOG1966|consen 419 NMFVTTTIAVIFFTVFLQGITIKPLVKFLKVKRKNK-----RDPTMNEEIYNRLLDHLMAG-IEDIAGQ----------- 481 (670)
T ss_pred cceEeeeeEEEeeeeeecccchHHHHHHHccccccc-----cCchhhHHHHHHHHHHHHHH-HHHHhcc-----------
Confidence 999999999999999999999999999999987654 25667899999999999999 9999986
Q ss_pred ccCCcchhhchHhhhhccccccccCCC
Q 023195 241 LTTPTHTVHYYWRKFDDAFMRPVFGGR 267 (286)
Q Consensus 241 ~~~~~~~~~~~w~~fd~~ymrp~f~~~ 267 (286)
+++++..+.|++||++|+||++.++
T Consensus 482 --~gh~~~rdk~~~fn~kylrp~L~r~ 506 (670)
T KOG1966|consen 482 --KGHYYWRDKFERFNNKYLRPLLMRH 506 (670)
T ss_pred --cccchhhhhHHHHHhhhchHHHhhh
Confidence 4678889999999999999999997
No 3
>TIGR00840 b_cpa1 sodium/hydrogen exchanger 3. This model is specific for the eukaryotic members members of this family.
Probab=100.00 E-value=2e-44 Score=358.34 Aligned_cols=231 Identities=29% Similarity=0.434 Sum_probs=203.2
Q ss_pred hhHHHHHHHHHHhhccchHHHHHHHHHHhccccccCCChhhHHHHHHHHHHHHHHHHHHHHHHHhhcchhh-hhhhhccC
Q 023195 2 VLMAYLSYMLAELFYLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHTFATLSFVAEIFIFLYVGMDALDI-EKWRFVKG 80 (286)
Q Consensus 2 ll~aylsY~lAE~l~~SGIlAvv~~Gi~m~~y~~~nls~~s~~~~~~f~~~ls~l~e~~IF~~lGl~~~~~-~~w~~~~~ 80 (286)
++++|++|.+||.+|+||++|+++||++|++|...|++++++.+.++||+++++++|+++|+++|+++... ..|+
T Consensus 244 l~~~yl~Y~lAE~l~~SGiLAvv~aGl~~~~y~~~n~s~~~~~~~~~f~~~ls~l~e~~IFvlLGl~l~~~~~~~~---- 319 (559)
T TIGR00840 244 FLISYLSYLFAETLHLSGILALIFCGITMKKYVEANMSRRSQTTIKYFMKMLSSLSETLIFIFLGVSLVTENHEWN---- 319 (559)
T ss_pred HHHHHHHHHHHHHhccchHHHHHHHHHHHHhhhcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHH----
Confidence 67899999999999999999999999999999999999999999999999999999999999999987654 2342
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCCchhhhhhhhcccchhHHHHHHHhhhhhccCCCcccch
Q 023195 81 SPGTSVAASAMLMGLIMAGRAAFVFPLSFLTNLAKKSPTEKISIKQQVIIWWAGLMRGAVSMALAYNQFTRSGHTQLREN 160 (286)
Q Consensus 81 ~~~~~~~~~~~~~~~~lv~R~l~V~~~~~l~n~~~~~~~~~i~~~~~~ii~w~GLmRGavslaLA~~~~~~~~~~~~~~~ 160 (286)
+.+.++++++|+++|+++|++++++.|..+ ..++++++|++++|+|+ ||+||+|||+.++. ...+.+
T Consensus 320 -----~~~i~~~l~~~ll~R~l~V~~~~~~~~~~~---~~~~~~~e~~il~w~Gl-RGaVa~aLAl~l~~----~~~~~~ 386 (559)
T TIGR00840 320 -----WAFVVATLSFCVIYRVLGVRTLSWITNEFR---PVEIPYKDQLVIFYAGL-RGAVAFALALLLDE----KIFPYK 386 (559)
T ss_pred -----HHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---cCCCChhhhhheeeecc-ccHHHHHHHHhCCC----CCcchH
Confidence 223345677889999999999999998775 46899999999999997 99999999998742 346889
Q ss_pred hHHHHHHHHHHHHHHhhhhhcHHHHHHHhCCCCCCCCCccCCCCCCCCCcccccccccccCCcCCCCCCCCCCCCccccc
Q 023195 161 AIMITSTITVVLFSTVVFGLMTKPLIRLLLPHPKHTTNHILSDPSTPKSLSQPLLEEGQQDSYADLGGPTVPRPGSLRAL 240 (286)
Q Consensus 161 ~~i~~~t~~vVl~S~lv~G~t~~pl~~~L~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (286)
++++++|+.||++|+++||+|++|++++|+++++++ ++++..|++|.+++|+.+.+ .||++|+
T Consensus 387 ~~i~~~t~~VVl~TvlvqG~T~~pl~~~L~l~~~~~-----~~~~~~e~~~~~~~~~~~~~-ie~~~g~----------- 449 (559)
T TIGR00840 387 FLFVTTTLVVVFFTVIFQGGTIKPLVEVLKVKKGCI-----SKTKINEELHDREFDHLLPG-IEDICGQ----------- 449 (559)
T ss_pred HHHHHHHHeeehHHHHHHHhhHHHHHHHhCCCCCcc-----chhhHHHHHHHHHHHHHHhH-HHHHhhh-----------
Confidence 999999999999999999999999999999977553 24556789999999999998 9999986
Q ss_pred ccCCcchhhchHhhhhccccccccCCCC
Q 023195 241 LTTPTHTVHYYWRKFDDAFMRPVFGGRG 268 (286)
Q Consensus 241 ~~~~~~~~~~~w~~fd~~ymrp~f~~~~ 268 (286)
.++++..+.|++||+||+||++.++.
T Consensus 450 --~~~~~~~~~~~~~~~~~~~~~l~~~~ 475 (559)
T TIGR00840 450 --IGHDRAIDKLNGFDIKYLLKPLIRRN 475 (559)
T ss_pred --cchHHHHHHHHHHhhhhChHhhcCCc
Confidence 35688889999999999999999963
No 4
>TIGR00831 a_cpa1 Na+/H+ antiporter, bacterial form. This model is specific for the bacterial members of this family.
Probab=99.97 E-value=2.1e-29 Score=249.92 Aligned_cols=190 Identities=19% Similarity=0.383 Sum_probs=149.4
Q ss_pred hhHHHHHHHHHHhhccchHHHHHHHHHHhcccccc-CCChhhHHHHHHHHHHHHHHHHHHHHHHHhhcchhhh--hhhhc
Q 023195 2 VLMAYLSYMLAELFYLSGILTVFFCGIVMSHYTWH-NVTESSRVTTKHTFATLSFVAEIFIFLYVGMDALDIE--KWRFV 78 (286)
Q Consensus 2 ll~aylsY~lAE~l~~SGIlAvv~~Gi~m~~y~~~-nls~~s~~~~~~f~~~ls~l~e~~IF~~lGl~~~~~~--~w~~~ 78 (286)
++++|++|.+||.+|+||++|+++||++++++... +.+++.+...++||+++++++|+++|+++|++++... .|...
T Consensus 215 l~~~~~~y~lAe~lg~SgilAvv~aGl~l~~~~~~~~~~~~~~~~~~~fw~~l~~ll~~~iFvllGl~l~~~~~~~~~~~ 294 (525)
T TIGR00831 215 ILAPFAGFLLAERFHFSGVIAVVAAGLILTNYGRDFSMSPTTRLIALDFWSVIVFLVNGIIFILIGVQTPGTIFSAWKEI 294 (525)
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhh
Confidence 57899999999999999999999999999999877 7888999999999999999999999999999987642 23211
Q ss_pred cCCCc-hHH---HHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCCchhhhhhhhcccchhHHHHHHHhhhhhc-cC
Q 023195 79 KGSPG-TSV---AASAMLMGLIMAGRAAFVFPLSFLTNLAKKSPTEKISIKQQVIIWWAGLMRGAVSMALAYNQFTR-SG 153 (286)
Q Consensus 79 ~~~~~-~~~---~~~~~~~~~~lv~R~l~V~~~~~l~n~~~~~~~~~i~~~~~~ii~w~GLmRGavslaLA~~~~~~-~~ 153 (286)
..... ..+ ...++++..+.+.|+++++. .+.|+..+++..+++|+++++++|+|+ ||++|+|+|+.+|.. .+
T Consensus 295 ~~~~~~~~~~~~~~~~~i~~~~~~~r~~~~~~--~~~~~~~~~~~~~~~~r~~~v~~w~G~-RG~vslA~al~~p~~~~~ 371 (525)
T TIGR00831 295 LVAPAAVILALFTNAFVIYPVMTYVRFLWTMK--PFSNRFLKKKPMEFGTRWKHVVSWAGL-RGAIPLALALSFPNQLLS 371 (525)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHhhcccCCCChhhHHHheeccc-hHHHHHHHHHHccccccC
Confidence 00000 001 11233445566778766554 233443333446789999999999995 999999999998742 33
Q ss_pred CCcccchhHHHHHHHHHHHHHHhhhhhcHHHHHHHhCCCCC
Q 023195 154 HTQLRENAIMITSTITVVLFSTVVFGLMTKPLIRLLLPHPK 194 (286)
Q Consensus 154 ~~~~~~~~~i~~~t~~vVl~S~lv~G~t~~pl~~~L~~~~~ 194 (286)
+.++|+|+.+++++++||++|+++||+|+||+++++++.++
T Consensus 372 g~~~p~r~~i~~~~~~vVl~TllvqG~tlp~l~r~l~~~~~ 412 (525)
T TIGR00831 372 GMAFPARYELVFLAAGVILFSLLVQGISLPIFVKRKFVSEH 412 (525)
T ss_pred CCCCchHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcCCCCC
Confidence 35789999999999999999999999999999999998653
No 5
>COG0025 NhaP NhaP-type Na+/H+ and K+/H+ antiporters [Inorganic ion transport and metabolism]
Probab=99.94 E-value=1.1e-25 Score=218.30 Aligned_cols=179 Identities=25% Similarity=0.369 Sum_probs=149.4
Q ss_pred hhHHHHHHHHHHhhccchHHHHHHHHHHhccccccCCCh-hhHHHHHHHHHHHHHHHHHHHHHHHhhcchhhhhhhhccC
Q 023195 2 VLMAYLSYMLAELFYLSGILTVFFCGIVMSHYTWHNVTE-SSRVTTKHTFATLSFVAEIFIFLYVGMDALDIEKWRFVKG 80 (286)
Q Consensus 2 ll~aylsY~lAE~l~~SGIlAvv~~Gi~m~~y~~~nls~-~s~~~~~~f~~~ls~l~e~~IF~~lGl~~~~~~~w~~~~~ 80 (286)
+..++.+|.+||.+|.||++|++++|++++++...+.+. +.|...++|||.+++++|+++|+++|.++.....+..
T Consensus 231 L~~~~~~~~~a~~l~~SGilAvvvaG~~~~~~~~~~~~~~~~~~~~~~fwe~l~~~ln~~iFiLlG~~i~~~~~~~~--- 307 (429)
T COG0025 231 LLLAFAAYLLAEALGVSGILAVVVAGLVLGEAVRINLSPASARLRLSSFWEVLDFLLNGLLFVLLGAQLPLSLLLAL--- 307 (429)
T ss_pred HHHHHHHHHHHHHhCcchHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHh---
Confidence 568999999999999999999999999998555556555 4588999999999999999999999999987643221
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCCchhhhhhhhcccchhHHHHHHHhhhhhccCCCcccch
Q 023195 81 SPGTSVAASAMLMGLIMAGRAAFVFPLSFLTNLAKKSPTEKISIKQQVIIWWAGLMRGAVSMALAYNQFTRSGHTQLREN 160 (286)
Q Consensus 81 ~~~~~~~~~~~~~~~~lv~R~l~V~~~~~l~n~~~~~~~~~i~~~~~~ii~w~GLmRGavslaLA~~~~~~~~~~~~~~~ 160 (286)
.+...+++.+.++++|+++||+.....+ + +...+.+++++++++|+|+ ||++++|+|+..+.... + +.+
T Consensus 308 ----~~~~~l~~~~~~~v~R~~~V~~~~~~~~--~-~~~~~~~~~~~~~l~w~G~-RG~vsla~al~~p~~~~--~-~~~ 376 (429)
T COG0025 308 ----GLLGLLVALVAVLLARPLWVFLSLKGSN--L-KLRDPLPWRERLFLSWAGP-RGVVSLALALLIPLELP--G-PAR 376 (429)
T ss_pred ----hHHHHHHHHHHHHHHHHHHHHHHHhhcc--c-cccCCCCHHHHHHHhhccc-ccHHHHHHHHHchhhcc--c-hhh
Confidence 1333456678899999999999987655 1 1235789999999999996 99999999999874322 2 679
Q ss_pred hHHHHHHHHHHHHHHhhhhhcHHHHHHHhCCCCC
Q 023195 161 AIMITSTITVVLFSTVVFGLMTKPLIRLLLPHPK 194 (286)
Q Consensus 161 ~~i~~~t~~vVl~S~lv~G~t~~pl~~~L~~~~~ 194 (286)
+.++..++.+|++|+++||.+++|+.+++...++
T Consensus 377 ~~i~~i~~~vIl~Sl~v~g~t~~~l~~~~~~~~~ 410 (429)
T COG0025 377 ELILFIVFLVILFSLLVQGLTLPPLAKKLEVSEE 410 (429)
T ss_pred hHHHHHHHHHHHHHHHHHhhhHHHHHHHhccCcc
Confidence 9999999999999999999999999999988543
No 6
>COG3263 NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain [Inorganic ion transport and metabolism]
Probab=99.87 E-value=8e-22 Score=186.44 Aligned_cols=169 Identities=22% Similarity=0.318 Sum_probs=143.1
Q ss_pred hhHHHHHHHHHHhhccchHHHHHHHHHHhccccccCCChhhHHHHHHHHHHHHHHHHHHHHHHHhhcchhhhhhhhccCC
Q 023195 2 VLMAYLSYMLAELFYLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHTFATLSFVAEIFIFLYVGMDALDIEKWRFVKGS 81 (286)
Q Consensus 2 ll~aylsY~lAE~l~~SGIlAvv~~Gi~m~~y~~~nls~~s~~~~~~f~~~ls~l~e~~IF~~lGl~~~~~~~w~~~~~~ 81 (286)
+..+.++|.+++.+|.||++||..||++.+|.. -++|+.+.+|++-++++++..+|+.+|+.+...+.|..
T Consensus 227 la~~Ll~fs~t~aiGGsG~LaVYl~Gll~GN~~-----i~~r~~I~~f~dG~twlaQI~MFlvLGLLvtPsql~~i---- 297 (574)
T COG3263 227 LAGGLLIFSLTGAIGGSGILAVYLAGLLLGNRP-----IRARHGILRFFDGLAWLAQILMFLVLGLLVTPSQLLPI---- 297 (574)
T ss_pred HHHHHHHHHHHHHhcCcccHHHHHHHHHhCCCc-----chhHHHHHHHhccHHHHHHHHHHHHHHHhcCHhhhhHh----
Confidence 345788999999999999999999999999764 46788999999999999999999999998887776653
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCCchhhhhhhhcccchhHHHHHHHhhhhhccCCCcccchh
Q 023195 82 PGTSVAASAMLMGLIMAGRAAFVFPLSFLTNLAKKSPTEKISIKQQVIIWWAGLMRGAVSMALAYNQFTRSGHTQLRENA 161 (286)
Q Consensus 82 ~~~~~~~~~~~~~~~lv~R~l~V~~~~~l~n~~~~~~~~~i~~~~~~ii~w~GLmRGavslaLA~~~~~~~~~~~~~~~~ 161 (286)
.+...++.+.+++++|++.||.... ..|.+++|..+++|.|| ||||++.||..... .+.+...
T Consensus 298 ---avPailL~l~mifvaRP~aV~l~l~---------Pfrf~~~Ek~fvSWvGL-RGAv~IilAifpm~----aglena~ 360 (574)
T COG3263 298 ---AIPAILLSLWMIFVARPLAVFLGLI---------PFRFNRREKLFVSWVGL-RGAVPIILAIFPMM----AGLENAR 360 (574)
T ss_pred ---hHHHHHHHHHHHHHHhHHHHHHhhc---------ccccCccchheeehhhc-ccchhhhHhhhHHh----cCCccce
Confidence 2334456678899999999987642 24588999999999999 99999999986432 2467778
Q ss_pred HHHHHHHHHHHHHHhhhhhcHHHHHHHhCCCCCCC
Q 023195 162 IMITSTITVVLFSTVVFGLMTKPLIRLLLPHPKHT 196 (286)
Q Consensus 162 ~i~~~t~~vVl~S~lv~G~t~~pl~~~L~~~~~~~ 196 (286)
+++.+++.||+.|+++||.|++|..+++++..+++
T Consensus 361 l~FNvAF~VVLvSlliQG~tl~~~a~~l~~i~p~~ 395 (574)
T COG3263 361 LFFNVAFFVVLVSLLIQGSTLPWAAKKLKVIVPPR 395 (574)
T ss_pred EEeehhHHHHHHHHHHccCcchHHHHhcccccCCC
Confidence 89999999999999999999999999999876553
No 7
>PRK05326 potassium/proton antiporter; Reviewed
Probab=99.86 E-value=7.6e-21 Score=190.28 Aligned_cols=169 Identities=24% Similarity=0.330 Sum_probs=134.8
Q ss_pred hhHHHHHHHHHHhhccchHHHHHHHHHHhccccccCCChhhHHHHHHHHHHHHHHHHHHHHHHHhhcchhhhhhhhccCC
Q 023195 2 VLMAYLSYMLAELFYLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHTFATLSFVAEIFIFLYVGMDALDIEKWRFVKGS 81 (286)
Q Consensus 2 ll~aylsY~lAE~l~~SGIlAvv~~Gi~m~~y~~~nls~~s~~~~~~f~~~ls~l~e~~IF~~lGl~~~~~~~w~~~~~~ 81 (286)
+.+++++|.+||.+|+||++|+++||+++++... +.+...+++++.++++++.+.|+++|+.+......+.
T Consensus 229 l~~~l~~~~~a~~lg~Sg~la~~iaGl~l~n~~~-----~~~~~i~~~~~~l~~l~~~~~Fv~lGl~~~~~~l~~~---- 299 (562)
T PRK05326 229 LAGALLIFALTAALGGSGFLAVYLAGLVLGNRPI-----RHRHSILRFFDGLAWLAQIGMFLVLGLLVTPSRLLDI---- 299 (562)
T ss_pred HHHHHHHHHHHHHHCCcHHHHHHHHHHHHhCCcc-----cchHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHH----
Confidence 4678999999999999999999999999997532 3345688999999999999999999998754321111
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCCchhhhhhhhcccchhHHHHHHHhhhhhccCCCcccchh
Q 023195 82 PGTSVAASAMLMGLIMAGRAAFVFPLSFLTNLAKKSPTEKISIKQQVIIWWAGLMRGAVSMALAYNQFTRSGHTQLRENA 161 (286)
Q Consensus 82 ~~~~~~~~~~~~~~~lv~R~l~V~~~~~l~n~~~~~~~~~i~~~~~~ii~w~GLmRGavslaLA~~~~~~~~~~~~~~~~ 161 (286)
.+...++.+++++++|+++++.... ..+++++|+.+++|+|+ ||++++++|..... ...+..+
T Consensus 300 ---~~~~l~i~~~l~~vaR~l~v~l~~~---------~~~~~~~e~~~i~~~g~-RG~v~i~lA~~~~~----~~~~~~~ 362 (562)
T PRK05326 300 ---ALPALLLALFLILVARPLAVFLSLL---------PFRFNLREKLFISWVGL-RGAVPIVLATFPMM----AGLPNAQ 362 (562)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHHHHc---------cCCCCHhhhheeeeecc-hhHHHHHHHHHHHH----cCCCchh
Confidence 1111223345678999999986642 24789999999999997 99999999975421 2356677
Q ss_pred HHHHHHHHHHHHHHhhhhhcHHHHHHHhCCCCCCC
Q 023195 162 IMITSTITVVLFSTVVFGLMTKPLIRLLLPHPKHT 196 (286)
Q Consensus 162 ~i~~~t~~vVl~S~lv~G~t~~pl~~~L~~~~~~~ 196 (286)
.++.+++.+|++|+++||.+++|+++++++.++++
T Consensus 363 ~~~~~~~~vvl~S~~i~g~tl~~~a~~l~l~~~~~ 397 (562)
T PRK05326 363 LIFNVVFFVVLVSLLLQGTTLPWAARKLGVVVPPE 397 (562)
T ss_pred hhhhhhheeeHHHHHHHHhhHHHHHHHcCCCCCCC
Confidence 88999999999999999999999999999976554
No 8
>TIGR00844 c_cpa1 na(+)/h(+) antiporter. This model is specific for the fungal members of this family.
Probab=99.78 E-value=2.9e-18 Score=174.43 Aligned_cols=171 Identities=15% Similarity=0.125 Sum_probs=123.8
Q ss_pred hhHHHHHHHHHHhhccchHHHHHHHHHHhccccccCCChhhHHHHHHHHHHHHHHHHHHHHHHHhhcchhhhhhhhccCC
Q 023195 2 VLMAYLSYMLAELFYLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHTFATLSFVAEIFIFLYVGMDALDIEKWRFVKGS 81 (286)
Q Consensus 2 ll~aylsY~lAE~l~~SGIlAvv~~Gi~m~~y~~~nls~~s~~~~~~f~~~ls~l~e~~IF~~lGl~~~~~~~w~~~~~~ 81 (286)
+.+++++|.+|+.+|+||+||||+||+++++..+. ..+....+||+.++.++|.++|+++|+.++...... . .-
T Consensus 249 LaLAli~~gla~lLggSGfLAVFVAGl~~gn~~~~----~~~~~~~~f~e~ie~LLn~~lFVlLGa~L~~~~l~~-~-~l 322 (810)
T TIGR00844 249 LILALTCAGFGSMLGVDDLLVSFFAGTAFAWDGWF----AQKTHESNVSNVIDVLLNYAYFVYLGSILPWKDFNN-G-DI 322 (810)
T ss_pred HHHHHHHHHHHHHhccccHHHHHHHHHHHhcccch----hhhHHHhhHHHHHHHHHHHHHHHHHHHhhCHhhccc-c-hh
Confidence 45789999999999999999999999999987542 112334679999999999999999999876432100 0 00
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCCchhhhhhhhcccchhHHHHHHHhhhhh-cc-CCCc---
Q 023195 82 PGTSVAASAMLMGLIMAGRAAFVFPLSFLTNLAKKSPTEKISIKQQVIIWWAGLMRGAVSMALAYNQFT-RS-GHTQ--- 156 (286)
Q Consensus 82 ~~~~~~~~~~~~~~~lv~R~l~V~~~~~l~n~~~~~~~~~i~~~~~~ii~w~GLmRGavslaLA~~~~~-~~-~~~~--- 156 (286)
....|...++.++++++.|+..|+.+..+. +...+++++++++|.|+ ||+.|+..+..... .. +...
T Consensus 323 ~~~~w~~ilLaL~LifVrRPpaVlll~~li-------~~~~s~rErlFigWFGp-RGIGSIyyl~~A~~~~~~~~~~~~~ 394 (810)
T TIGR00844 323 GLDVWRLIILSLVVIFLRRIPAVLILKPLI-------PDIKSWREAMFIGHFGP-IGVGAVFAAILSKSQLESHLTDEET 394 (810)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-------ccCCCHHHHHHheeecc-ccHHHHHHHHHHHHhhhcccCcccc
Confidence 011233345667788899998887654322 23468999999999997 99999985554321 01 0000
Q ss_pred ---------c---cchhHHHHHHHHHHHHHHhhhhhcHHHHH
Q 023195 157 ---------L---RENAIMITSTITVVLFSTVVFGLMTKPLI 186 (286)
Q Consensus 157 ---------~---~~~~~i~~~t~~vVl~S~lv~G~t~~pl~ 186 (286)
. ...+.+..+|..+|+.|++|||+++.|++
T Consensus 395 ~~~~~~~~~~~~~~~~~~lw~iv~f~V~~SIivHG~S~~~l~ 436 (810)
T TIGR00844 395 PLNVTPGKGSKHWQLMACIWPITCFSIVTSVIVHGSSVAVIM 436 (810)
T ss_pred cccccccccchhhhHHHHHHHHHHHHHHHHHhhccccchHHH
Confidence 0 01468999999999999999999999985
No 9
>PF00999 Na_H_Exchanger: Sodium/hydrogen exchanger family; InterPro: IPR006153 Sodium proton exchangers (NHEs) constitute a large family of integral membrane protein transporters that are responsible for the counter-transport of protons and sodium ions across lipid bilayers [, ]. These proteins are found in organisms across all domains of life. In archaea, bacteria, yeast and plants, these exchangers provide increased salt tolerance by removing sodium in exchanger for extracellular protons. In mammals they participate in the regulation of cell pH, volume, and intracellular sodium concentration, as well as for the reabsorption of NaCl across renal, intestinal, and other epithelia [, , , ]. Human NHE is also involved in heart disease, cell growth and in cell differentiation []. The removal of intracellular protons in exchange for extracellular sodium effectively eliminates excess acid from actively metabolising cells. In mammalian cells, NHE activity is found in both the plasma membrane and inner mitochondrial membrane. To date, nine mammalian isoforms have been identified (designated NHE1-NHE9) [, ]. These exchangers are highly-regulated (glyco)phosphoproteins, which, based on their primary structure, appear to contain 10-12 membrane-spanning regions (M) at the N terminus and a large cytoplasmic region at the C terminus. The transmembrane regions M3-M12 share identity with other members of the family. The M6 and M7 regions are highly conserved. Thus, this is thought to be the region that is involved in the transport of sodium and hydrogen ions. The cytoplasmic region has little similarity throughout the family. There is some evidence that the exchangers may exist in the cell membrane as homodimers, but little is currently known about the mechanism of their antiport []. This entry represents a number of cation/proton exchangers, including Na+/H+ exchangers, K+/H+ exchangers and Na+(K+,Li+,Rb+)/H+ exchangers.; GO: 0015299 solute:hydrogen antiporter activity, 0006812 cation transport, 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2L0E_A 2HTG_A 2KBV_A 2E30_B 1Y4E_A.
Probab=99.29 E-value=8.4e-13 Score=125.46 Aligned_cols=162 Identities=26% Similarity=0.354 Sum_probs=20.2
Q ss_pred hhHHHHHHHHHHhhccchHHHHHHHHHHhccccccCCChhhHHHHHHHHHHHHHHHHHHHHHHHhhcchhhhhhhhccCC
Q 023195 2 VLMAYLSYMLAELFYLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHTFATLSFVAEIFIFLYVGMDALDIEKWRFVKGS 81 (286)
Q Consensus 2 ll~aylsY~lAE~l~~SGIlAvv~~Gi~m~~y~~~nls~~s~~~~~~f~~~ls~l~e~~IF~~lGl~~~~~~~w~~~~~~ 81 (286)
+.+++..|.+||.+|.||+++++++|+.+++...+ ++.++..+++++ .+++.+.|+++|+.+....-..
T Consensus 219 l~~~~~~~~~a~~~g~s~~l~af~~Gl~~~~~~~~---~~~~~~l~~~~~---~~~~~lfF~~iG~~~~~~~l~~----- 287 (380)
T PF00999_consen 219 LALILLLYGLAEILGLSGILGAFIAGLILSNSPFA---ERLEEKLESFWY---GFFIPLFFVFIGMSLDFSSLFN----- 287 (380)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHhhhccccccccccccceeeeeehcccccccc---chhhhcccchhh---HHHhhHHhhhhccccccccccc-----
Confidence 56788999999999999999999999999954322 233334555555 8899999999999887321100
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCCchhhhhhhhcccchhHHHHHHHhhhhhccCCCcccchh
Q 023195 82 PGTSVAASAMLMGLIMAGRAAFVFPLSFLTNLAKKSPTEKISIKQQVIIWWAGLMRGAVSMALAYNQFTRSGHTQLRENA 161 (286)
Q Consensus 82 ~~~~~~~~~~~~~~~lv~R~l~V~~~~~l~n~~~~~~~~~i~~~~~~ii~w~GLmRGavslaLA~~~~~~~~~~~~~~~~ 161 (286)
....+...++.++.++++|++.++..+.. .+.++|++..++|++..||.++++++...... +....+
T Consensus 288 ~~~~~~~~~~~~~~~~~~k~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~g~~~l~la~~~~~~----~~~~~~ 354 (380)
T PF00999_consen 288 SPSVIILVLLLLIAILLGKFIGVYLASRL---------FGIPWKEALFIGLGMLPRGEVSLALALIALNL----GIISEQ 354 (380)
T ss_dssp --------------------------------------------HHHHTTTTSS--HHHHHHHHHHHHH-----------
T ss_pred chhhhhhHHHHHHHHHHhhhceeehhhhh---------cccccchhHHHHHhhcCccHHHHHHHHHHHhc----CCCCHH
Confidence 01123333455667779999999876542 46899999999999955999999999876431 223334
Q ss_pred HHHHHHHHHHHHHHhhhhhcHHHHHHH
Q 023195 162 IMITSTITVVLFSTVVFGLMTKPLIRL 188 (286)
Q Consensus 162 ~i~~~t~~vVl~S~lv~G~t~~pl~~~ 188 (286)
+ .+.+..++++|++++|.+++|+++|
T Consensus 355 ~-~~~~~~~vl~t~ii~~~~~~~l~~~ 380 (380)
T PF00999_consen 355 M-FTIIIAAVLLTIIIAGIILSPLLRK 380 (380)
T ss_dssp ---------------------------
T ss_pred H-HHHheeeeeeHHHHHHHHHHHHhcC
Confidence 4 8888999999999999999999886
No 10
>KOG4505 consensus Na+/H+ antiporter [Inorganic ion transport and metabolism]
Probab=98.42 E-value=5.4e-07 Score=83.98 Aligned_cols=169 Identities=17% Similarity=0.194 Sum_probs=114.7
Q ss_pred hHHHHHHHHHHhhccchHHHHHHHHHHhccccccCCChhhHHHHHHHHHHHHHHHHHHHHHHHhhcchhhh-hhhhccCC
Q 023195 3 LMAYLSYMLAELFYLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHTFATLSFVAEIFIFLYVGMDALDIE-KWRFVKGS 81 (286)
Q Consensus 3 l~aylsY~lAE~l~~SGIlAvv~~Gi~m~~y~~~nls~~s~~~~~~f~~~ls~l~e~~IF~~lGl~~~~~~-~w~~~~~~ 81 (286)
.+++.+-.+.+.+|++-.+-.|++|++.+.-.|- +.++ ...+.-+.+..+++..-|+|.|..++..+ +|...+.+
T Consensus 250 vl~lfc~gigtiiGvddLl~sFfAGi~Fswd~wF--sk~t--~~s~v~~viD~lls~sfF~yfGaiipwsqFn~s~~gl~ 325 (467)
T KOG4505|consen 250 VLALFCMGIGTIIGVDDLLVSFFAGIVFSWDEWF--SKKT--KESRVSEVIDLLLSLSFFLYFGAIIPWSQFNLSVEGLP 325 (467)
T ss_pred HHHHHHhhhhheechhHHHHHHHhhhhcchhHHh--hhhh--hhccHHHHHHHHHHHHHHHHhccccchhhcCCcccCch
Confidence 4566666777889999999999999999976553 2222 23456778889999999999998776432 33322223
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCCchhhhhhhhcccchhHHHHHHHhhhhhc--cC--CCcc
Q 023195 82 PGTSVAASAMLMGLIMAGRAAFVFPLSFLTNLAKKSPTEKISIKQQVIIWWAGLMRGAVSMALAYNQFTR--SG--HTQL 157 (286)
Q Consensus 82 ~~~~~~~~~~~~~~~lv~R~l~V~~~~~l~n~~~~~~~~~i~~~~~~ii~w~GLmRGavslaLA~~~~~~--~~--~~~~ 157 (286)
.|..++ +.+.++++-|.-.||.+-++.. .-.+|||.+++.|.|+ -|.-++..|+..-.. .. ....
T Consensus 326 vwrlvi---lsi~iif~RRip~v~l~kp~iP-------dikswkEALFvGhFGP-IGVgAly~allar~~le~~ep~~~i 394 (467)
T KOG4505|consen 326 VWRLVI---LSITIIFIRRIPAVYLMKPLIP-------DIKSWKEALFVGHFGP-IGVGALYYALLARKELETLEPEKSI 394 (467)
T ss_pred HHHHHH---HHHHHHHhcccceEEEeccCCc-------chhhHHHHHHhccCCC-ccHHHHHHHHHHHhhhccCCccccc
Confidence 333332 3344556677766665544332 2348999999999997 999999988753210 00 0111
Q ss_pred c--------chhHHHHHHHHHHHHHHhhhhhcHHHHH
Q 023195 158 R--------ENAIMITSTITVVLFSTVVFGLMTKPLI 186 (286)
Q Consensus 158 ~--------~~~~i~~~t~~vVl~S~lv~G~t~~pl~ 186 (286)
+ -.+.++..+..+|+.|++|||.+.+-+.
T Consensus 395 ~~~e~~~w~li~~iwpivsf~vlsSIiVHG~sv~~~t 431 (467)
T KOG4505|consen 395 YESETVFWTLIEIIWPIVSFTVLSSIIVHGSSVAMYT 431 (467)
T ss_pred CCccccchhhhhhhhhhhHHHHHHHHHhccchhhHHH
Confidence 1 1366888899999999999999986543
No 11
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional
Probab=98.03 E-value=0.00031 Score=71.48 Aligned_cols=119 Identities=13% Similarity=0.113 Sum_probs=77.1
Q ss_pred HHHHHHHHHHhhccchHHHHHHHHHHhccccccCCChhhHHHHHHHHHHHHHHHHHHHHHHHhhcchhhhhhhhccCCCc
Q 023195 4 MAYLSYMLAELFYLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHTFATLSFVAEIFIFLYVGMDALDIEKWRFVKGSPG 83 (286)
Q Consensus 4 ~aylsY~lAE~l~~SGIlAvv~~Gi~m~~y~~~nls~~s~~~~~~f~~~ls~l~e~~IF~~lGl~~~~~~~w~~~~~~~~ 83 (286)
+.+++-+++|.+|+|.++.+|++|+++++.. ..++.....+.| .-++-.+.|+.+|+.+....-++
T Consensus 224 ~vl~~a~l~~~~Gls~~LGAFlaGl~l~~s~---~~~~l~~~i~pf----~~lll~lFFi~vGm~id~~~l~~------- 289 (601)
T PRK03659 224 LVLGSALFMDALGLSMALGTFIAGVLLAESE---YRHELEIAIEPF----KGLLLGLFFISVGMALNLGVLYT------- 289 (601)
T ss_pred HHHHHHHHHHHhCccHHHHHHHHHHHhcCCc---hHHHHHHHHHHH----HHHHHHHHHHHHhhhccHHHHHH-------
Confidence 4455556789999999999999999999732 122323333343 34566999999998775422111
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCCchhhhhhh-hcccchhHHHHHHHhh
Q 023195 84 TSVAASAMLMGLIMAGRAAFVFPLSFLTNLAKKSPTEKISIKQQVIIW-WAGLMRGAVSMALAYN 147 (286)
Q Consensus 84 ~~~~~~~~~~~~~lv~R~l~V~~~~~l~n~~~~~~~~~i~~~~~~ii~-w~GLmRGavslaLA~~ 147 (286)
.+...+.++++.+++|++.++..... .+.++++...++ +-.. ||-.++.++-.
T Consensus 290 -~~~~il~~~~~~l~~K~~~~~~~~~~---------~g~~~~~al~~g~~L~~-~Gef~~vl~~~ 343 (601)
T PRK03659 290 -HLLWVLISVVVLVAVKGLVLYLLARL---------YGLRSSERMQFAGVLSQ-GGEFAFVLFSA 343 (601)
T ss_pred -hHHHHHHHHHHHHHHHHHHHHHHHHH---------hCCCHHHHHHHHHHHhc-cccHHHHHHHH
Confidence 11112333456778999998876542 356787876555 3465 99888886654
No 12
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional
Probab=97.65 E-value=0.0012 Score=67.50 Aligned_cols=121 Identities=16% Similarity=0.107 Sum_probs=78.3
Q ss_pred hhHHHHHHHHHHhhccchHHHHHHHHHHhccccccCCChhhHHHHHHHHHHHHHHHHHHHHHHHhhcchhhhhhhhccCC
Q 023195 2 VLMAYLSYMLAELFYLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHTFATLSFVAEIFIFLYVGMDALDIEKWRFVKGS 81 (286)
Q Consensus 2 ll~aylsY~lAE~l~~SGIlAvv~~Gi~m~~y~~~nls~~s~~~~~~f~~~ls~l~e~~IF~~lGl~~~~~~~w~~~~~~ 81 (286)
+++++++.+++|.+|+|.++.+|++|+++++... ++....-.+-+..++-.+-|+.+|+.+....-.+
T Consensus 225 l~lv~~~a~la~~~Gls~~lGAFlAGl~l~~~~~-------~~~le~~i~pf~~lll~lFFi~vG~~id~~~l~~----- 292 (621)
T PRK03562 225 LFLVFGFGLLMEEVGLSMALGAFLAGVLLASSEY-------RHALESDIEPFKGLLLGLFFIAVGMSIDFGTLLE----- 292 (621)
T ss_pred HHHHHHHHHHHHHhCccHHHHHHHHHHHhcCCcc-------HHHHHHHHHHHHHHHHHHHHHHhhhhccHHHHHH-----
Confidence 4556778889999999999999999999996321 2223333333345666899999999774321111
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCCchhhhhhhhcccchhHHHHHHHh
Q 023195 82 PGTSVAASAMLMGLIMAGRAAFVFPLSFLTNLAKKSPTEKISIKQQVIIWWAGLMRGAVSMALAY 146 (286)
Q Consensus 82 ~~~~~~~~~~~~~~~lv~R~l~V~~~~~l~n~~~~~~~~~i~~~~~~ii~w~GLmRGavslaLA~ 146 (286)
..+.+ +..+++.++++++.++....+ .++++++...+++.=--||-.++.++.
T Consensus 293 --~~~~i-l~~~~~~~~~K~~~~~~~~~~---------~g~~~~~a~~~gl~L~~~Gef~~vl~~ 345 (621)
T PRK03562 293 --NPLRI-LILLLGFLAIKIAMLWLLARP---------LGVPRKQRRWFAVLLGQGGEFAFVVFG 345 (621)
T ss_pred --HHHHH-HHHHHHHHHHHHHHHHHHHHH---------hCCCHhHHHHHHHHHhccccHHHHHHH
Confidence 01111 233445778999988876543 356788888877743226777777653
No 13
>PRK10669 putative cation:proton antiport protein; Provisional
Probab=97.60 E-value=0.003 Score=63.61 Aligned_cols=141 Identities=18% Similarity=0.140 Sum_probs=81.9
Q ss_pred HHHHHHhhccchHHHHHHHHHHhccccccCCChhhHHHHHHHHHHHHHHHHHHHHHHHhhcchhhhhhhhccCCCchHHH
Q 023195 8 SYMLAELFYLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHTFATLSFVAEIFIFLYVGMDALDIEKWRFVKGSPGTSVA 87 (286)
Q Consensus 8 sY~lAE~l~~SGIlAvv~~Gi~m~~y~~~nls~~s~~~~~~f~~~ls~l~e~~IF~~lGl~~~~~~~w~~~~~~~~~~~~ 87 (286)
++..+|.+|+|.+++++++|++++... ..++... + ..-+..++-.+-|+.+|+.+.....++. ..
T Consensus 239 a~~~~~~lGls~~lGAflaGl~l~~~~---~~~~~~~---~-~~~~~~~f~plFFv~~G~~~d~~~l~~~--------~~ 303 (558)
T PRK10669 239 AFGAVELFDVSFALGAFFAGMVLNESE---LSHRAAH---D-TLPLRDAFAVLFFVSVGMLFDPMILIQQ--------PL 303 (558)
T ss_pred HHHHHHHcCccHHHHHHHHHHHHhCCh---hHHHHHH---H-HhhHHHHHHHHHHHHhhhhcCHHHHHHH--------HH
Confidence 455679999999999999999998631 1111111 1 1112345677889999998754322221 11
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCCchhhhhhhhcccchhHHHHHHHhhhhhccCCCcccchhHHHHHH
Q 023195 88 ASAMLMGLIMAGRAAFVFPLSFLTNLAKKSPTEKISIKQQVIIWWAGLMRGAVSMALAYNQFTRSGHTQLRENAIMITST 167 (286)
Q Consensus 88 ~~~~~~~~~lv~R~l~V~~~~~l~n~~~~~~~~~i~~~~~~ii~w~GLmRGavslaLA~~~~~~~~~~~~~~~~~i~~~t 167 (286)
..+..+++.+++|++.++..... .+.++|+.+.++.+=--||..++.++..-.. .+. -.+......
T Consensus 304 ~~~~~~~~~~v~K~~~~~~~~~~---------~g~~~~~a~~~gl~l~~~Gef~lii~~~~~~-~gi----i~~~~~~~~ 369 (558)
T PRK10669 304 AVLATLAIIVFGKSLAAFFLVRL---------FGHSRRTALTIAASLAQIGEFAFILAGLGMA-LNL----LPQAGQNLV 369 (558)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH---------hCCChhhHHHHHHHHhcccchHHHHHHHHHh-CCC----CCHHHHHHH
Confidence 11233455788999988865543 3456777777766422378888776654321 121 112233344
Q ss_pred HHHHHHHHhh
Q 023195 168 ITVVLFSTVV 177 (286)
Q Consensus 168 ~~vVl~S~lv 177 (286)
..++++|+++
T Consensus 370 v~~~~~t~~~ 379 (558)
T PRK10669 370 LAGAILSIML 379 (558)
T ss_pred HHHHHHHHHH
Confidence 5555666666
No 14
>PLN03159 cation/H(+) antiporter 15; Provisional
Probab=97.48 E-value=0.005 Score=65.07 Aligned_cols=123 Identities=11% Similarity=0.108 Sum_probs=78.0
Q ss_pred HHHHHHHHHHhhccchHHHHHHHHHHhccccccCCChhhHHHHHHHHHHHHHHHHHHHHHHHhhcchhhhhhhhccCCCc
Q 023195 4 MAYLSYMLAELFYLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHTFATLSFVAEIFIFLYVGMDALDIEKWRFVKGSPG 83 (286)
Q Consensus 4 ~aylsY~lAE~l~~SGIlAvv~~Gi~m~~y~~~nls~~s~~~~~~f~~~ls~l~e~~IF~~lGl~~~~~~~w~~~~~~~~ 83 (286)
+.+++.+++|.+|+|.++.+|++|+++.+- +..+...+.+-.....++--+-|+..|+.+.-...+ ..
T Consensus 280 ~vl~~a~lae~~Gl~~ilGAFlaGl~lp~~------~~~~~l~ekle~~~~~lflPlFFv~vGl~idl~~l~------~~ 347 (832)
T PLN03159 280 GVMISGFITDAIGTHSVFGAFVFGLVIPNG------PLGVTLIEKLEDFVSGLLLPLFFAISGLKTNVTKIQ------GP 347 (832)
T ss_pred HHHHHHHHHHHhCccHHHHHHHHhhccCCc------chHHHHHHHHHHHHHHHHHHHHHHHhhheeeHHHhc------Cc
Confidence 345667789999999999999999998841 111112223333334566778899999876432111 01
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCCchhhhhhhhcccchhHHHHHHHhh
Q 023195 84 TSVAASAMLMGLIMAGRAAFVFPLSFLTNLAKKSPTEKISIKQQVIIWWAGLMRGAVSMALAYN 147 (286)
Q Consensus 84 ~~~~~~~~~~~~~lv~R~l~V~~~~~l~n~~~~~~~~~i~~~~~~ii~w~GLmRGavslaLA~~ 147 (286)
..+.+.++++++.++++++..+....+ .++++++.+.+++.=-.||.+.+.++..
T Consensus 348 ~~~~~~~~liv~a~~gK~~g~~l~a~~---------~g~~~~eal~lG~lm~~kG~~~Lii~~i 402 (832)
T PLN03159 348 ATWGLLVLVIIMASAGKIMGTIIIAFF---------YTMPFREGITLGFLMNTKGLVEMIVLNV 402 (832)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHH---------hCCCHHHHHHHHHHHhcccHHHHHHHHH
Confidence 122222334455667888777655432 4688999988887533499988886654
No 15
>COG0475 KefB Kef-type K+ transport systems, membrane components [Inorganic ion transport and metabolism]
Probab=97.29 E-value=0.018 Score=55.81 Aligned_cols=160 Identities=19% Similarity=0.217 Sum_probs=91.0
Q ss_pred hHHHHHHHHHHhhccchHHHHHHHHHHhccccccCCChhhHHHHHHHHHHHHH-HHHHHHHHHHhhcchhhhhhhhccCC
Q 023195 3 LMAYLSYMLAELFYLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHTFATLSF-VAEIFIFLYVGMDALDIEKWRFVKGS 81 (286)
Q Consensus 3 l~aylsY~lAE~l~~SGIlAvv~~Gi~m~~y~~~nls~~s~~~~~~f~~~ls~-l~e~~IF~~lGl~~~~~~~w~~~~~~ 81 (286)
.+.+.+=+++|.+|+|-++..|.+|+.++....+ ++..++-.+-+.. ++-.+-|+.+|+++....-++
T Consensus 229 ~i~l~~a~l~e~~gls~ilGAFlaGl~ls~~~~~------~~~l~~~i~~~~~~~fiplFFi~vG~~~dl~~l~~----- 297 (397)
T COG0475 229 LLVLGAAYLAELLGLSMILGAFLAGLLLSESEYR------KHELEEKIEPFGDGLFIPLFFISVGMSLDLGVLLE----- 297 (397)
T ss_pred HHHHHHHHHHHHhChhHHHHHHHHHHHhcccccc------hHHHHHHHHhHHhHHHHHHHHHHhhHHcCHHHHhc-----
Confidence 4455666789999999999999999999975422 1233344444455 777888999999886432111
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCCchhhhhhhhcccchhHHHHHHHhhhhhccCCCcccchh
Q 023195 82 PGTSVAASAMLMGLIMAGRAAFVFPLSFLTNLAKKSPTEKISIKQQVIIWWAGLMRGAVSMALAYNQFTRSGHTQLRENA 161 (286)
Q Consensus 82 ~~~~~~~~~~~~~~~lv~R~l~V~~~~~l~n~~~~~~~~~i~~~~~~ii~w~GLmRGavslaLA~~~~~~~~~~~~~~~~ 161 (286)
.+...+....+..+.+.+..+....+. +.+.+++...++.. |+...++++..-. + .+....+
T Consensus 298 ---~~~~~l~~~~~~i~~K~~~~~~~~~~~---------g~~~~~~~~~g~~~--~~~ge~~~v~~~~---~-~~~~i~~ 359 (397)
T COG0475 298 ---NLLLILLLVALAILGKILGAYLAARLL---------GFSKRLALGIGLLL--RQGGEFAFVLAGI---A-LGSAISE 359 (397)
T ss_pred ---cHHHHHHHHHHHHHHHHHHHHHHHHHH---------cCcHHHHHHHHhhh--hhhhHHHHHHHHh---c-ccchhHH
Confidence 111234455667788888777665432 34566666666654 5554444443321 1 1112233
Q ss_pred HHHHHHHHHHHHHHhhhhhcHHHHHHHhCC
Q 023195 162 IMITSTITVVLFSTVVFGLMTKPLIRLLLP 191 (286)
Q Consensus 162 ~i~~~t~~vVl~S~lv~G~t~~pl~~~L~~ 191 (286)
.+...+..+.++++.+--...+.+.++...
T Consensus 360 ~~~~~~v~~smi~t~i~~~~~~~~~~~~~~ 389 (397)
T COG0475 360 ALLTAVVILSMITTPILPLLTPILLKRLLK 389 (397)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 344433333444444333445555555443
No 16
>TIGR00932 2a37 transporter, monovalent cation:proton antiporter-2 (CPA2) family.
Probab=95.63 E-value=0.043 Score=49.96 Aligned_cols=61 Identities=28% Similarity=0.426 Sum_probs=47.0
Q ss_pred hhHHHHHHHHHHhhccchHHHHHHHHHHhccccccCCChhhHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 023195 2 VLMAYLSYMLAELFYLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHTFATLSFVAEIFIFLYVGMDA 69 (286)
Q Consensus 2 ll~aylsY~lAE~l~~SGIlAvv~~Gi~m~~y~~~nls~~s~~~~~~f~~~ls~l~e~~IF~~lGl~~ 69 (286)
+.+.++.+.+||.+|.|++++++++|+.+++... ++...+..+.+..+..-+-|+++|+.+
T Consensus 212 l~~~~~~~~la~~~g~s~~lgaf~aGl~~~~~~~-------~~~l~~~l~~~~~~f~plFF~~~G~~~ 272 (273)
T TIGR00932 212 LLLMFGSAYFADLLGLSMALGAFLAGVVLSESEY-------RHKLESDLEPIGGVLLPLFFISVGMSV 272 (273)
T ss_pred HHHHHHHHHHHHHhCCcHHHHHHHHHHHHcCCch-------HHHHHHHHHhHHHHHHHHHHHHhCccC
Confidence 3467788899999999999999999999997421 223455555566777888889999754
No 17
>TIGR00844 c_cpa1 na(+)/h(+) antiporter. This model is specific for the fungal members of this family.
Probab=91.38 E-value=12 Score=39.69 Aligned_cols=71 Identities=11% Similarity=0.133 Sum_probs=48.8
Q ss_pred hhHHHHHHHHHHhhccchHHHHHHHHHHhccccccCCChhhHHHHHHHHHHHHHHHHHHHHHHHhhcchhh
Q 023195 2 VLMAYLSYMLAELFYLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHTFATLSFVAEIFIFLYVGMDALDI 72 (286)
Q Consensus 2 ll~aylsY~lAE~l~~SGIlAvv~~Gi~m~~y~~~nls~~s~~~~~~f~~~ls~l~e~~IF~~lGl~~~~~ 72 (286)
+++++++.+++|-+.+|..+..+.+|++++......+.+..-......+-.++.++-.++-+-.|+.+...
T Consensus 23 ll~~l~s~~lkeRl~Ls~~~v~Ll~GiilGP~~l~~idP~~~g~~d~i~leIteIvL~I~LFa~Gl~L~~~ 93 (810)
T TIGR00844 23 SIFSLVSLFVKEKLYIGESMVASIFGLIVGPHCLNWFNPLSWGNTDSITLEISRILLCLQVFAVSVELPRK 93 (810)
T ss_pred HHHHHHHHHHHhhcCCcHHHHHHHHHHHhhhhhhccCChhhcccchHHHHHHHHHHHHHHHHHHHHhCCHH
Confidence 57889999999999999999999999999987654444432111122222266566666666667776543
No 18
>PF02667 SCFA_trans: Short chain fatty acid transporter; InterPro: IPR006160 Members of this family may be short chain fatty acid transporters although there has been no experimental characterisation of this function.
Probab=76.29 E-value=75 Score=31.59 Aligned_cols=26 Identities=15% Similarity=0.303 Sum_probs=22.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcchh
Q 023195 46 TKHTFATLSFVAEIFIFLYVGMDALD 71 (286)
Q Consensus 46 ~~~f~~~ls~l~e~~IF~~lGl~~~~ 71 (286)
-+-||+.++|-++..+-+..|..+..
T Consensus 51 g~GfW~LL~F~MQM~LilvtG~~lA~ 76 (453)
T PF02667_consen 51 GDGFWSLLAFAMQMALILVTGYALAS 76 (453)
T ss_pred hccHHHHHHHHHHHHHHHHHHHHHhC
Confidence 36799999999999999999987754
No 19
>TIGR00773 NhaA Na+/H+ antiporter NhaA. These proteins are members of the NhaA Na+:H+ Antiporter (NhaA) Family (TC. 2.A.33). The Escherichia coli NhaA protein probably functions in the regulation of the internal pH when the external pH is alkaline. It also uses the H+ gradient to expel Na+ from the cell. Its activity is highly pH dependent. Only the E. coli protein is functionally and structurally well characterized.
Probab=64.28 E-value=1e+02 Score=29.89 Aligned_cols=111 Identities=16% Similarity=0.143 Sum_probs=68.1
Q ss_pred HhhccchHHHHHHHHHHhccccccCCChhhHHHHHHHHHHHH-H-HHHHHHHHHHhhcchhhhhhhhccCCCchHHHHHH
Q 023195 13 ELFYLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHTFATLS-F-VAEIFIFLYVGMDALDIEKWRFVKGSPGTSVAASA 90 (286)
Q Consensus 13 E~l~~SGIlAvv~~Gi~m~~y~~~nls~~s~~~~~~f~~~ls-~-l~e~~IF~~lGl~~~~~~~w~~~~~~~~~~~~~~~ 90 (286)
...|....+|-|..|+++-+..... ++..++.+|..+-.+ + +.=.|-|.-.|+.+.... .+. ..... ..
T Consensus 213 ~~sGVHatiaGvllGl~iP~~~~~~--~~pl~rleh~L~p~v~~lilPlFAFanAGv~l~~~~-~~~-----~~~~v-~l 283 (373)
T TIGR00773 213 LKSGVHATLAGVIIGFFIPLKGKKG--ESPLKRLEHVLHPWVAYLILPLFAFANAGVSLQGVS-LNG-----LTSML-PL 283 (373)
T ss_pred HHcCCcHHHHHHHHeeeecccccCC--CCHHHHHHHHHHHHHHHHHHHHHHHHhcCeeeecCc-chh-----hcChH-HH
Confidence 6778888899999999998753222 233345566655444 3 334455778888874322 110 00111 23
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhcc-CCCCCCCchhhhhhhh
Q 023195 91 MLMGLIMAGRAAFVFPLSFLTNLAKK-SPTEKISIKQQVIIWW 132 (286)
Q Consensus 91 ~~~~~~lv~R~l~V~~~~~l~n~~~~-~~~~~i~~~~~~ii~w 132 (286)
.+++..+++.++.++..+++.-+++. +..+..+|++..-++.
T Consensus 284 gI~lgLvvGK~lGI~~~~~l~~kl~~~~lP~~~~w~~~~gv~~ 326 (373)
T TIGR00773 284 GIILGLLIGKPLGIFLFSWIAVKLKLAKLPEGINFKQIFAVGV 326 (373)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Confidence 44566789999999999998776653 2235677777665554
No 20
>PRK14853 nhaA pH-dependent sodium/proton antiporter; Provisional
Probab=54.67 E-value=2.2e+02 Score=28.04 Aligned_cols=122 Identities=10% Similarity=0.117 Sum_probs=69.0
Q ss_pred HHHHHHHHHhhccchHHHHHHHHHHhccccccC-CC----hhhHHHHHHHHHHHH--HHHHHHHHHHHhhcchhhhhh-h
Q 023195 5 AYLSYMLAELFYLSGILTVFFCGIVMSHYTWHN-VT----ESSRVTTKHTFATLS--FVAEIFIFLYVGMDALDIEKW-R 76 (286)
Q Consensus 5 aylsY~lAE~l~~SGIlAvv~~Gi~m~~y~~~n-ls----~~s~~~~~~f~~~ls--~l~e~~IF~~lGl~~~~~~~w-~ 76 (286)
.....+..+..|....+|-|+.|+++-...+.. .. ++.....+|..+-.. ++.=.|-|.-.|+++...... +
T Consensus 215 g~~lW~~~~~sGiHatiAGvllGl~IP~~~~~~~~~~~~~~~p~~rle~~L~p~V~~~ILPLFAFANaGV~l~~~~~~~~ 294 (423)
T PRK14853 215 GVATWILVHESGVHATVAGVLLGFAVPVLRREGEEGPEAGPGLAEHLEHRLRPLSAGVAVPVFAFFSAGVAIGGLSGLGA 294 (423)
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHhcccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhheecCchhHHH
Confidence 334555667889999999999999996422211 00 111223344444332 333445577788887542111 0
Q ss_pred hccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcc-CCCCCCCchhhhhhhh
Q 023195 77 FVKGSPGTSVAASAMLMGLIMAGRAAFVFPLSFLTNLAKK-SPTEKISIKQQVIIWW 132 (286)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~lv~R~l~V~~~~~l~n~~~~-~~~~~i~~~~~~ii~w 132 (286)
.. ... +.+.+.+.++++.++.++..+++.-+++. +..+..+|++..-++.
T Consensus 295 ~~----~~p--v~lgI~lgL~vGK~lGI~~~~~l~~k~~~~~lP~~~~~~~l~gv~~ 345 (423)
T PRK14853 295 AL----TDP--IVLGVVLGLVVGKPIGIFGTTYLLTKFTRASLDDDLTWIDVFGVAL 345 (423)
T ss_pred Hh----hch--HHHHHHHHHHHHhHHHHHHHHHHHHHhCcCCCCCCCCHHHHHHHHH
Confidence 00 001 22344566789999999999988765542 1234577777655544
No 21
>PLN03159 cation/H(+) antiporter 15; Provisional
Probab=53.85 E-value=3.1e+02 Score=29.43 Aligned_cols=70 Identities=10% Similarity=0.224 Sum_probs=49.3
Q ss_pred hhHHHHHHHHHHhhccchHHHHHHHHHHhccccccCCChhhH----HHHHHHHHHHHHHHHHHHHHHHhhcchh
Q 023195 2 VLMAYLSYMLAELFYLSGILTVFFCGIVMSHYTWHNVTESSR----VTTKHTFATLSFVAEIFIFLYVGMDALD 71 (286)
Q Consensus 2 ll~aylsY~lAE~l~~SGIlAvv~~Gi~m~~y~~~nls~~s~----~~~~~f~~~ls~l~e~~IF~~lGl~~~~ 71 (286)
++++.+.+.+++-++...+++=.++|++++............ .......+.++.+.-.++.+++|+++..
T Consensus 52 l~~a~l~~~ll~rl~~P~ivgeIlaGIlLGPs~lg~i~~~~~~~fp~~~~~~l~~la~lGlillmFliGLE~Dl 125 (832)
T PLN03159 52 VVTTRLLVFILKPFRQPRVISEILGGVILGPSVLGQSEVFANTIFPLRSVMVLETMANLGLLYFLFLVGVEMDI 125 (832)
T ss_pred HHHHHHHHHHHHhcCCChhHHHHHHHHhcCHhhhCcChhhhhhcCCcchHHHHHHHHHHHHHHHHHHHHHcCcH
Confidence 456677788888899999999999999999765432221100 0122356777777777888889998864
No 22
>PF09446 VMA21: VMA21-like domain; InterPro: IPR019013 The vacuolar ATPase assembly integral membrane protein VMA21 is required for the assembly of the integral membrane sector (V0 component) of the vacuolar ATPase (V-ATPase) in the endoplasmic reticulum []. This entry represents a putative short domain found in VMA21-like proteins, and which appears to contain two potential transmembrane helices.
Probab=53.76 E-value=13 Score=26.74 Aligned_cols=33 Identities=24% Similarity=0.471 Sum_probs=25.0
Q ss_pred ChhHHHHHHHHHHhhc--------------cchHHHHHHHHHHhccc
Q 023195 1 MVLMAYLSYMLAELFY--------------LSGILTVFFCGIVMSHY 33 (286)
Q Consensus 1 mll~aylsY~lAE~l~--------------~SGIlAvv~~Gi~m~~y 33 (286)
|+.+|.++|......- .||+.||+..=+++.-|
T Consensus 15 M~~lPl~~ff~~~~~~~~~~~~~~~~~~~~~sgi~Avi~vnvVl~~Y 61 (66)
T PF09446_consen 15 MFTLPLGTFFGFKYFLFDGFFGLSPSDNTIYSGIAAVIVVNVVLASY 61 (66)
T ss_pred HHHHHHHHHHHHHHHHhcccccCCcchhhHHHHHHHHHHHHHHHHHH
Confidence 6788999998887422 58888888887777665
No 23
>PF11712 Vma12: Endoplasmic reticulum-based factor for assembly of V-ATPase; InterPro: IPR021013 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. V-ATPases (also known as V1V0-ATPase or vacuolar ATPase) (3.6.3.14 from EC) are found in the eukaryotic endomembrane system, and in the plasma membrane of prokaryotes and certain specialised eukaryotic cells. V-ATPases hydrolyse ATP to drive a proton pump, and are involved in a variety of vital intra- and inter-cellular processes such as receptor mediated endocytosis, protein trafficking, active transport of metabolites, homeostasis and neurotransmitter release []. V-ATPases are composed of two linked complexes: the V1 complex (subunits A-H) contains the catalytic core that hydrolyses ATP, while the V0 complex (subunits a, c, c', c'', d) forms the membrane-spanning pore. V-ATPases may have an additional role in membrane fusion through binding to t-SNARE proteins []. The yeast vacuolar proton-translocating ATPase (V-ATPase) is the best characterised member of the V-ATPase family. A total of thirteen genes are required for encoding the subunits of the enzyme complex itself and an additional three for providing factors necessary for the assembly of the whole. Vma12 is one of these latter, all three of which are localised to the endoplasmic reticulum [].
Probab=48.41 E-value=44 Score=27.49 Aligned_cols=20 Identities=20% Similarity=0.165 Sum_probs=9.5
Q ss_pred HHHHHHHHHHHHHHHHHHhh
Q 023195 48 HTFATLSFVAEIFIFLYVGM 67 (286)
Q Consensus 48 ~f~~~ls~l~e~~IF~~lGl 67 (286)
..+..+-.+.-+++|.|.+.
T Consensus 81 ~v~Nilvsv~~~~~~~~~~~ 100 (142)
T PF11712_consen 81 TVFNILVSVFAVFFAGWYWA 100 (142)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 33444444455555555433
No 24
>KOG1650 consensus Predicted K+/H+-antiporter [Inorganic ion transport and metabolism]
Probab=42.85 E-value=3e+02 Score=29.31 Aligned_cols=154 Identities=17% Similarity=0.203 Sum_probs=70.6
Q ss_pred HHHHHHHHHhhc-cchHHHHHHHHHHhccccccCCChhhHHHHHHHHHHHHHHHHHHHHHHHhhcchhh--hhhhhccCC
Q 023195 5 AYLSYMLAELFY-LSGILTVFFCGIVMSHYTWHNVTESSRVTTKHTFATLSFVAEIFIFLYVGMDALDI--EKWRFVKGS 81 (286)
Q Consensus 5 aylsY~lAE~l~-~SGIlAvv~~Gi~m~~y~~~nls~~s~~~~~~f~~~ls~l~e~~IF~~lGl~~~~~--~~w~~~~~~ 81 (286)
.+.+..+.+.++ ...++..++.|+..-|-.+- .....+.+=....-++--+=|...|+...-. ..|
T Consensus 267 vl~~~~~~~~~~~i~~~~Gaf~~Gl~iP~~~p~-----g~~L~ekle~~~~~~llPl~~~~~G~k~di~~i~~~------ 335 (769)
T KOG1650|consen 267 VLASAFLTDLIGGIHSIFGAFILGLAIPHGPPL-----GSALIEKLEDLVSGLLLPLYFAISGLKTDISRINKW------ 335 (769)
T ss_pred HHHHHHHHHHhccccccchhheEEEecCCCCch-----hHHHHHHHHHHHHHHHHHHHHHhhccceeHHHHHHH------
Confidence 444555555554 66677788888887654321 1111111111222334444455556544321 112
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCCchhhhhhhhcccchhHHHHHHHhhhhhccCCCcccchh
Q 023195 82 PGTSVAASAMLMGLIMAGRAAFVFPLSFLTNLAKKSPTEKISIKQQVIIWWAGLMRGAVSMALAYNQFTRSGHTQLRENA 161 (286)
Q Consensus 82 ~~~~~~~~~~~~~~~lv~R~l~V~~~~~l~n~~~~~~~~~i~~~~~~ii~w~GLmRGavslaLA~~~~~~~~~~~~~~~~ 161 (286)
.....++....+.-++++...+.. .|+++++.+.++..=..+|.+.+..--.. -+++
T Consensus 336 -----~~~~~~i~~~~~~K~l~t~~~sl~---------~k~p~~~~l~l~~lm~~kgl~el~~~~~~---------~~~~ 392 (769)
T KOG1650|consen 336 -----GALIRTILIFGAVKLLSTLGTSLY---------CKLPLRDSLALGLLMSTKGLVELIVLNTG---------LDRK 392 (769)
T ss_pred -----HHHHHHHHHHHHHHHHHHHHHHHH---------hcCchhHHHHHHHHHHhhhHHHHHHHHHH---------hhcC
Confidence 121223334445555555444331 46777776655443222444333311111 1122
Q ss_pred HHHHHHHHHHHHHHhhhhhcHHHHHHHhCCC
Q 023195 162 IMITSTITVVLFSTVVFGLMTKPLIRLLLPH 192 (286)
Q Consensus 162 ~i~~~t~~vVl~S~lv~G~t~~pl~~~L~~~ 192 (286)
.+-.-++.+-++..+++-..++|++..+...
T Consensus 393 ~~~~~~f~~~vl~alv~t~I~~~~l~~~y~p 423 (769)
T KOG1650|consen 393 ILSDEGFTVMVLMALVSTFITPPLLMFLYDP 423 (769)
T ss_pred CcccchHHHHHHHHHHHHhhHHHHHHHhcch
Confidence 2223344455555555566678888777643
No 25
>COG4651 RosB Kef-type K+ transport system, predicted NAD-binding component [Inorganic ion transport and metabolism]
Probab=41.32 E-value=18 Score=34.21 Aligned_cols=59 Identities=25% Similarity=0.357 Sum_probs=37.7
Q ss_pred HHHHHHHhhccchHHHHHHHHHHhccccccCCChhhHHHHHHHHHHHHHHHHHHHHHHHhhcchhh
Q 023195 7 LSYMLAELFYLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHTFATLSFVAEIFIFLYVGMDALDI 72 (286)
Q Consensus 7 lsY~lAE~l~~SGIlAvv~~Gi~m~~y~~~nls~~s~~~~~~f~~~ls~l~e~~IF~~lGl~~~~~ 72 (286)
.+|..+|++|+|=-+..+++|++++... .|++..+..-. +-...-.+-|+-+|+.....
T Consensus 238 Va~Ga~~LfgvsfaLGAffaGMvL~ese---lshraa~~slp----LrdaFaVlFFvsVGmlf~P~ 296 (408)
T COG4651 238 VAFGAAELFGVSFALGAFFAGMVLAESE---LSHRAAEDSLP----LRDAFAVLFFVSVGMLFDPM 296 (408)
T ss_pred HhhccceeeccchhHHHHHHHHHhcchh---hhHHHHHhccC----HHHHHHHHHHHHhhhhcCcH
Confidence 4677889999999999999999998532 23332221111 12223345677788876553
No 26
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional
Probab=35.10 E-value=4.3e+02 Score=27.05 Aligned_cols=69 Identities=14% Similarity=0.373 Sum_probs=47.3
Q ss_pred hhHHHHHHHHHHhhccchHHHHHHHHHHhccccccCCChhhHHHHHHHHHHHHHHHHHHHHHHHhhcchhhhhhh
Q 023195 2 VLMAYLSYMLAELFYLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHTFATLSFVAEIFIFLYVGMDALDIEKWR 76 (286)
Q Consensus 2 ll~aylsY~lAE~l~~SGIlAvv~~Gi~m~~y~~~nls~~s~~~~~~f~~~ls~l~e~~IF~~lGl~~~~~~~w~ 76 (286)
+..+.++-.++.-++.+.+++=.++|++++.+....+++. +-.+.++.+.-.++.+.+|+++....-|+
T Consensus 14 l~~a~~~~~l~~rl~~p~ilg~ilaGillGP~~lg~i~~~------~~i~~laelGvv~LLF~iGLel~~~~l~~ 82 (601)
T PRK03659 14 LFAAVVAVPLAQRLGIGAVLGYLLAGIAIGPWGLGFISDV------DEILHFSELGVVFLMFIIGLELNPSKLWQ 82 (601)
T ss_pred HHHHHHHHHHHHHhCCChHHHHHHHHHHhccccccCCCcH------HHHHHHHHHHHHHHHHHHHhcCCHHHHHH
Confidence 3455666677888999999999999999998654433322 11334566666777788899876544343
No 27
>PF15176 LRR19-TM: Leucine-rich repeat family 19 TM domain
Probab=35.08 E-value=1.7e+02 Score=23.06 Aligned_cols=32 Identities=19% Similarity=0.312 Sum_probs=22.0
Q ss_pred hhHHHHHHHHHHHHHHhhhhhcHH-HHHHHhCCC
Q 023195 160 NAIMITSTITVVLFSTVVFGLMTK-PLIRLLLPH 192 (286)
Q Consensus 160 ~~~i~~~t~~vVl~S~lv~G~t~~-pl~~~L~~~ 192 (286)
-..+..++.+++..|++| .+.+| |+.+++...
T Consensus 17 W~~LVGVv~~al~~SlLI-alaaKC~~~~k~~~S 49 (102)
T PF15176_consen 17 WPFLVGVVVTALVTSLLI-ALAAKCPVWYKYLAS 49 (102)
T ss_pred cHhHHHHHHHHHHHHHHH-HHHHHhHHHHHHHhc
Confidence 466777788888888887 45554 676666543
No 28
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional
Probab=32.72 E-value=5.7e+02 Score=26.33 Aligned_cols=69 Identities=14% Similarity=0.288 Sum_probs=47.9
Q ss_pred hhHHHHHHHHHHhhccchHHHHHHHHHHhccccccCCChhhHHHHHHHHHHHHHHHHHHHHHHHhhcchhhhhhh
Q 023195 2 VLMAYLSYMLAELFYLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHTFATLSFVAEIFIFLYVGMDALDIEKWR 76 (286)
Q Consensus 2 ll~aylsY~lAE~l~~SGIlAvv~~Gi~m~~y~~~nls~~s~~~~~~f~~~ls~l~e~~IF~~lGl~~~~~~~w~ 76 (286)
+..+.+.-.++.-++.+.+++=.++|++++.+....+++. +..+.++.+.-.++-+.+|+++....-|+
T Consensus 14 l~~a~i~~~l~~rl~lp~vlgyilaGillGP~~lg~i~~~------~~i~~laelGvv~LlF~iGLEl~~~~l~~ 82 (621)
T PRK03562 14 LGAAVLIVPIAVRLGLGSVLGYLIAGCIIGPWGLRLVTDV------ESILHFAEFGVVLMLFVIGLELDPQRLWK 82 (621)
T ss_pred HHHHHHHHHHHHHhCCChHHHHHHHHHHhCcccccCCCCH------HHHHHHHHHHHHHHHHHHHhCcCHHHHHH
Confidence 4456677778888999999999999999998654433321 12344555666677778899886544443
No 29
>KOG2290 consensus Rhomboid family proteins [Signal transduction mechanisms]
Probab=32.26 E-value=1.7e+02 Score=29.39 Aligned_cols=32 Identities=13% Similarity=0.384 Sum_probs=24.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcchhhhhhhh
Q 023195 45 TTKHTFATLSFVAEIFIFLYVGMDALDIEKWRF 77 (286)
Q Consensus 45 ~~~~f~~~ls~l~e~~IF~~lGl~~~~~~~w~~ 77 (286)
.++.=|+.+..+.-+++|+++|+ ++.+++|.-
T Consensus 538 il~~~w~a~~~Lia~~L~L~iGl-iPWiDN~aH 569 (652)
T KOG2290|consen 538 ILERPWRAFFHLIATLLVLCIGL-IPWIDNWAH 569 (652)
T ss_pred hhhhHHHHHHHHHHHHHHHHhcc-ccchhhHHH
Confidence 34456777888889999999995 666777753
No 30
>PF03601 Cons_hypoth698: Conserved hypothetical protein 698; InterPro: IPR018383 This entry represents a family of uncharacterised multi-pass membrane proteins.; GO: 0016021 integral to membrane
Probab=29.09 E-value=4.8e+02 Score=24.37 Aligned_cols=31 Identities=29% Similarity=0.518 Sum_probs=26.8
Q ss_pred hhHHHHHHHHHH----hhccchHHHHHHHHHHhcc
Q 023195 2 VLMAYLSYMLAE----LFYLSGILTVFFCGIVMSH 32 (286)
Q Consensus 2 ll~aylsY~lAE----~l~~SGIlAvv~~Gi~m~~ 32 (286)
++.+..+|.+++ ..+++..+=..+.|+.++|
T Consensus 7 ~~ia~~a~~l~~~~~~~~~l~~~~~AillG~~i~n 41 (305)
T PF03601_consen 7 FAIAILAYFLASLPFFLPGLGALLIAILLGMLIGN 41 (305)
T ss_pred HHHHHHHHHHHhCcccccCccHHHHHHHHHHHHhh
Confidence 467888999988 3689999999999999998
No 31
>PRK10669 putative cation:proton antiport protein; Provisional
Probab=28.50 E-value=6.2e+02 Score=25.43 Aligned_cols=65 Identities=18% Similarity=0.286 Sum_probs=49.4
Q ss_pred hhHHHHHHHHHHhhccchHHHHHHHHHHhccccccCCChhhHHHHHHHHHHHHHHHHHHHHHHHhhcchhh
Q 023195 2 VLMAYLSYMLAELFYLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHTFATLSFVAEIFIFLYVGMDALDI 72 (286)
Q Consensus 2 ll~aylsY~lAE~l~~SGIlAvv~~Gi~m~~y~~~nls~~s~~~~~~f~~~ls~l~e~~IF~~lGl~~~~~ 72 (286)
++.+++...++.-++.+-+++=..+|++++.+....+++ ..+.+.++.+.-.++.+++|+++...
T Consensus 15 l~~a~~~~~l~~rl~~P~ivg~IlaGillGp~~lg~~~~------~~~~~~la~lGli~llF~~Gle~d~~ 79 (558)
T PRK10669 15 LVLAFILGMLANRLRISPLVGYLLAGVLAGPFTPGFVAD------TKLAPELAELGVILLMFGVGLHFSLK 79 (558)
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHhhCccccccccc------hHHHHHHHHHHHHHHHHHhHhcCCHH
Confidence 456777778888899999999999999999876443322 13456777778888888999987643
No 32
>TIGR00366 conserved hypothetical integral membrane protein.
Probab=26.69 E-value=6.4e+02 Score=25.03 Aligned_cols=27 Identities=15% Similarity=0.144 Sum_probs=23.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcchh
Q 023195 45 TTKHTFATLSFVAEIFIFLYVGMDALD 71 (286)
Q Consensus 45 ~~~~f~~~ls~l~e~~IF~~lGl~~~~ 71 (286)
--+-||..++|-.+..+=+..|..+..
T Consensus 47 wg~GfW~LL~F~MQM~lilvtG~~lA~ 73 (438)
T TIGR00366 47 WGNGFWNLLGFGMQMALILVTGYALAY 73 (438)
T ss_pred HHhhHHHHHHHHHHHHHHHHHHHHHhc
Confidence 346799999999999999999987754
No 33
>TIGR00783 ccs citrate carrier protein, CCS family. These proteins are members of the Citrate:Cation Symporter (CCS) Family (TC 2.A.24). These proteins have 12 GES predicted transmembrane regions. Most members of the CCS family catalyze citrate uptake with either Na+ or H+ as the cotransported cation. However, one member is specific for L-malate and probably functions by a proton symport mechanism.
Probab=25.73 E-value=6e+02 Score=24.39 Aligned_cols=67 Identities=16% Similarity=0.167 Sum_probs=45.2
Q ss_pred hHHHHHHHHHHh---h-ccchHHHHHHHHHHhccccccCCChhhHHHHHHHHHHHHHHHHHHHHHHHhhcchh
Q 023195 3 LMAYLSYMLAEL---F-YLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHTFATLSFVAEIFIFLYVGMDALD 71 (286)
Q Consensus 3 l~aylsY~lAE~---l-~~SGIlAvv~~Gi~m~~y~~~nls~~s~~~~~~f~~~ls~l~e~~IF~~lGl~~~~ 71 (286)
+++..-|.+.-. + +..+.+-..+.|++.+... -++++.+...+++.+.+..-.-..++.=+|+...+
T Consensus 186 ~~a~~~y~~g~l~~~~~~Ih~~v~mII~~vi~k~~g--llp~~i~~~a~~~~~F~~~~lt~~ll~giGla~t~ 256 (347)
T TIGR00783 186 LFAVALFMAGGLLKSFPGIPAYAFMILIAAALKAFG--LVPKEIEEGAKMLSQFISKNLTWPLMVGVGVSYID 256 (347)
T ss_pred HHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHcccccCC
Confidence 344444544432 2 4577888888888888654 36778777888888777777777777767876544
No 34
>COG2855 Predicted membrane protein [Function unknown]
Probab=22.21 E-value=7e+02 Score=23.86 Aligned_cols=161 Identities=19% Similarity=0.231 Sum_probs=75.5
Q ss_pred HHHHHHHHHH-----hhccchHHHHHHHHHHhccccccCCChhhHHHHHHHHHHHHHHHHHHHHHHHhhcchhhhhhhhc
Q 023195 4 MAYLSYMLAE-----LFYLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHTFATLSFVAEIFIFLYVGMDALDIEKWRFV 78 (286)
Q Consensus 4 ~aylsY~lAE-----~l~~SGIlAvv~~Gi~m~~y~~~nls~~s~~~~~~f~~~ls~l~e~~IF~~lGl~~~~~~~w~~~ 78 (286)
++..+|+++. ..|+|..+=....|+..+++.+.. ++.. .--+|- --.+++.-| +++|..+.-.+--+.
T Consensus 19 ia~~a~~l~~~~~~~~~~l~al~lAIllGi~l~~l~~~~--~~~~-~GI~fs--~k~LLr~gI-vLlG~~ltl~~i~~~- 91 (334)
T COG2855 19 IAGLAMLLGAFFFSIHLGLSALTLAILLGILLGILPQIP--AQTS-AGITFS--SKKLLRLGI-VLLGFRLTLSDIADV- 91 (334)
T ss_pred HHHHHHHHhchHHhhhcCchHHHHHHHHHHHHhccccch--hhhc-cchhhh--HHHHHHHHH-HHHcceeeHHHHHHc-
Confidence 3444555443 455667888888999999775432 1110 001111 112333333 456665543221110
Q ss_pred cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCCchhhhhhhhcccchhHHHHHHHhhhhhccCCCccc
Q 023195 79 KGSPGTSVAASAMLMGLIMAGRAAFVFPLSFLTNLAKKSPTEKISIKQQVIIWWAGLMRGAVSMALAYNQFTRSGHTQLR 158 (286)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~lv~R~l~V~~~~~l~n~~~~~~~~~i~~~~~~ii~w~GLmRGavslaLA~~~~~~~~~~~~~ 158 (286)
....+ .+.+.++..=++..+.+- ++ -+.+++....++-+-=+=|+-+++-.-.+ .+.+
T Consensus 92 ---G~~~v----~~~~~~l~~t~~~~~~lg---~~------lgld~~~a~Lia~GssICGasAiaA~~pv------ika~ 149 (334)
T COG2855 92 ---GGSGV----LIIAITLSSTFLFAYFLG---KL------LGLDKKLALLIAAGSSICGASAIAATAPV------IKAE 149 (334)
T ss_pred ---CccHH----HHHHHHHHHHHHHHHHHH---HH------hCCCHHHHHHHHccchhhHHHHHHHhCCc------CCCC
Confidence 01111 112223333333333221 22 35677777776663224777665533221 1234
Q ss_pred chhHHHHHHHHHHHHHHhhhhhcHHHHHHHhCCCCCC
Q 023195 159 ENAIMITSTITVVLFSTVVFGLMTKPLIRLLLPHPKH 195 (286)
Q Consensus 159 ~~~~i~~~t~~vVl~S~lv~G~t~~pl~~~L~~~~~~ 195 (286)
++|...+++. |++|.++. -..-|.+.++++..++.
T Consensus 150 ~~eva~aIa~-V~lfgtia-~llyP~l~~~l~l~~~~ 184 (334)
T COG2855 150 EEEVAVAIAV-VVLFGTLA-MLLYPLLYPLLGLSPEQ 184 (334)
T ss_pred ccccceehhh-HHHHHHHH-HHHHHHHHHHhCCCcch
Confidence 4555555444 44455443 34567788888876543
No 35
>COG3671 Predicted membrane protein [Function unknown]
Probab=21.41 E-value=4e+02 Score=21.67 Aligned_cols=26 Identities=4% Similarity=0.183 Sum_probs=18.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhh
Q 023195 42 SRVTTKHTFATLSFVAEIFIFLYVGM 67 (286)
Q Consensus 42 s~~~~~~f~~~ls~l~e~~IF~~lGl 67 (286)
.+-..+.||-.+-.-.-++++.++|.
T Consensus 63 y~f~iRTFw~~vl~~iIg~Llt~lgi 88 (125)
T COG3671 63 YEFLIRTFWLAVLWWIIGLLLTFLGI 88 (125)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34456788887777777777777775
No 36
>COG4791 EscT Type III secretory pathway, component EscT [Intracellular trafficking and secretion]
Probab=20.35 E-value=6.5e+02 Score=23.17 Aligned_cols=42 Identities=19% Similarity=0.324 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhccCCCCCCCchhhhhhhhcccchhHHHHHHHhhhh
Q 023195 92 LMGLIMAGRAAFVFPLSFLTNLAKKSPTEKISIKQQVIIWWAGLMRGAVSMALAYNQF 149 (286)
Q Consensus 92 ~~~~~lv~R~l~V~~~~~l~n~~~~~~~~~i~~~~~~ii~w~GLmRGavslaLA~~~~ 149 (286)
+...+..+|++.+|...++.|. + -.+|++|+.+.+++++.+.
T Consensus 11 ~~~~L~~~R~l~if~iLP~l~~-------------~---l~~~liRngi~~s~al~v~ 52 (259)
T COG4791 11 VALALLLARPLGIFSILPVLNA-------------G---LLSGLIRNGIAISLALPVL 52 (259)
T ss_pred HHHHHHHHHHHHHHHHHHHHhc-------------c---ccchhhhhHHHHHHHHHHh
Confidence 3456778999999887776552 1 2356679999999988653
Done!