Your job contains 1 sequence.
>023196
METLYPASYMSNSSNWFLQESSRSTSWTKEENKRFESALAIYSESTPDRWIKVAAMIPGK
TVLDVIKQYKELEEDVSDIEAGRVPIPGYLSSSFTLELVSESDYDANRKRTLVAKSSDHE
RKKGVPWTEEEHKRFLMGLIKYGKGDWRNISRNYVISKTPTQVASHAQKYFIRQLSGGKD
KRRPSIHDITTGNLTNSVSSDNHKPSSFDQSNVIPAQQKSLGTPKVGLEWTDSNNGEVMA
SDSTQSNMLMPSAFEFGSHGLKLQGQNLYATTAYHGAHVKPRNPFF
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 023196
(286 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|Q8S9H7 - symbol:DIVARICATA "Transcription facto... 768 3.1e-76 1
TAIR|locus:2074723 - symbol:AT3G11280 species:3702 "Arabi... 732 2.0e-72 1
TAIR|locus:2166459 - symbol:AT5G05790 species:3702 "Arabi... 710 4.3e-70 1
TAIR|locus:2042872 - symbol:AT2G38090 species:3702 "Arabi... 682 4.0e-67 1
TAIR|locus:2154508 - symbol:AT5G58900 species:3702 "Arabi... 652 6.0e-64 1
TAIR|locus:2150149 - symbol:AT5G01200 species:3702 "Arabi... 333 8.8e-55 2
TAIR|locus:2028461 - symbol:AT1G49010 species:3702 "Arabi... 313 4.1e-43 2
TAIR|locus:2159607 - symbol:AT5G08520 species:3702 "Arabi... 431 8.5e-43 2
TAIR|locus:2175478 - symbol:AT5G04760 species:3702 "Arabi... 437 3.6e-41 1
TAIR|locus:2171711 - symbol:AT5G23650 species:3702 "Arabi... 395 1.0e-36 1
TAIR|locus:2075775 - symbol:AT3G10580 species:3702 "Arabi... 334 3.0e-30 1
TAIR|locus:2133667 - symbol:AT4G09450 species:3702 "Arabi... 325 2.7e-29 1
TAIR|locus:2094942 - symbol:AT3G16350 species:3702 "Arabi... 296 3.2e-26 1
TAIR|locus:2171519 - symbol:AT5G47390 species:3702 "Arabi... 289 1.8e-25 1
TAIR|locus:2011216 - symbol:AT1G19000 species:3702 "Arabi... 288 2.2e-25 1
TAIR|locus:2020653 - symbol:AT1G70000 species:3702 "Arabi... 275 5.3e-24 1
TAIR|locus:2165106 - symbol:AT5G56840 species:3702 "Arabi... 264 7.8e-23 1
TAIR|locus:2027181 - symbol:AT1G74840 species:3702 "Arabi... 259 2.6e-22 1
TAIR|locus:2151621 - symbol:AT5G61620 species:3702 "Arabi... 257 4.3e-22 1
TAIR|locus:2075760 - symbol:AT3G10590 species:3702 "Arabi... 256 5.5e-22 1
TAIR|locus:2025182 - symbol:RL6 "RAD-like 6" species:3702... 197 9.8e-16 1
TAIR|locus:2115260 - symbol:RL3 "RAD-like 3" species:3702... 190 5.4e-15 1
TAIR|locus:2136283 - symbol:RL1 "RAD-like 1" species:3702... 181 5.8e-14 1
UNIPROTKB|Q58FS3 - symbol:RAD "Transcription factor RADIA... 178 1.3e-13 1
TAIR|locus:4010713631 - symbol:RL4 "RAD-like 4" species:3... 178 1.3e-13 1
TAIR|locus:2049374 - symbol:MEE3 "MATERNAL EFFECT EMBRYO ... 174 4.0e-13 1
DICTYBASE|DDB_G0274463 - symbol:mybJ "myb domain-containi... 191 1.6e-12 1
TAIR|locus:2016417 - symbol:RL5 "RAD-like 5" species:3702... 167 2.6e-12 1
DICTYBASE|DDB_G0277927 - symbol:mybH "SWIRM domain-contai... 142 1.2e-08 2
TAIR|locus:2171494 - symbol:AT5G47290 "AT5G47290" species... 103 5.0e-08 2
DICTYBASE|DDB_G0289151 - symbol:mybI "myb domain-containi... 154 6.3e-08 1
UNIPROTKB|I3LNQ0 - symbol:I3LNQ0 "Uncharacterized protein... 142 5.7e-07 1
UNIPROTKB|I3LSN5 - symbol:I3LSN5 "Uncharacterized protein... 142 5.8e-07 1
UNIPROTKB|F1P3V8 - symbol:DNAJC2 "Uncharacterized protein... 143 6.1e-07 1
MGI|MGI:99470 - symbol:Dnajc2 "DnaJ (Hsp40) homolog, subf... 143 6.1e-07 1
UNIPROTKB|Q1RMH9 - symbol:DNAJC2 "DnaJ homolog subfamily ... 142 7.9e-07 1
UNIPROTKB|Q99543 - symbol:DNAJC2 "DnaJ homolog subfamily ... 142 7.9e-07 1
UNIPROTKB|F1SB54 - symbol:DNAJC2 "Uncharacterized protein... 142 7.9e-07 1
UNIPROTKB|Q4R8H2 - symbol:DNAJC2 "DnaJ homolog subfamily ... 142 7.9e-07 1
UNIPROTKB|E2RS54 - symbol:DNAJC2 "Uncharacterized protein... 142 8.0e-07 1
RGD|620524 - symbol:Dnajc2 "DnaJ (Hsp40) homolog, subfami... 137 2.9e-06 1
UNIPROTKB|Q6P2Y3 - symbol:dnajc2 "DnaJ homolog subfamily ... 134 6.4e-06 1
TAIR|locus:2169135 - symbol:RVE2 "REVEILLE 2" species:370... 127 9.9e-06 1
TAIR|locus:2014114 - symbol:EPR1 "EARLY-PHYTOCHROME-RESPO... 125 1.0e-05 2
TAIR|locus:2025411 - symbol:ASG4 "ALTERED SEED GERMINATIO... 126 1.3e-05 1
DICTYBASE|DDB_G0288783 - symbol:mybG "myb domain-containi... 128 1.7e-05 1
TAIR|locus:2124928 - symbol:AT4G01280 species:3702 "Arabi... 125 1.9e-05 1
TAIR|locus:504955668 - symbol:AT3G10113 species:3702 "Ara... 125 2.4e-05 1
TAIR|locus:2167210 - symbol:RVE1 "REVEILLE 1" species:370... 126 2.4e-05 1
ZFIN|ZDB-GENE-040426-1912 - symbol:dnajc2 "DnaJ (Hsp40) h... 128 3.0e-05 1
TAIR|locus:2075049 - symbol:RVE8 "REVEILLE 8" species:370... 123 3.2e-05 1
TAIR|locus:2149589 - symbol:AT5G52660 species:3702 "Arabi... 123 4.0e-05 1
TAIR|locus:504955890 - symbol:AT3G10595 species:3702 "Ara... 115 5.1e-05 1
TAIR|locus:2151251 - symbol:LCL1 "LHY/CCA1-like 1" specie... 121 5.2e-05 1
FB|FBgn0037051 - symbol:CG10565 species:7227 "Drosophila ... 122 0.00015 1
TAIR|locus:2200970 - symbol:LHY "LATE ELONGATED HYPOCOTYL... 116 0.00022 2
TAIR|locus:2044345 - symbol:CCA1 "circadian clock associa... 119 0.00030 1
>UNIPROTKB|Q8S9H7 [details] [associations]
symbol:DIVARICATA "Transcription factor DIVARICATA"
species:4151 "Antirrhinum majus" [GO:0009908 "flower development"
evidence=IMP] [GO:0048262 "determination of dorsal/ventral
asymmetry" evidence=IMP] InterPro:IPR001005 InterPro:IPR009057
Pfam:PF00249 SMART:SM00717 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293 GO:GO:0009908
InterPro:IPR017930 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 GO:GO:0048262 EMBL:AY077453
ProteinModelPortal:Q8S9H7 Uniprot:Q8S9H7
Length = 307
Score = 768 (275.4 bits), Expect = 3.1e-76, P = 3.1e-76
Identities = 157/280 (56%), Positives = 196/280 (70%)
Query: 1 METLYPASYMSNSSNWFLQESSRSTSWTKEENKRFESALAIYSESTPDRWIKVAAMIPGK 60
ME L P+SY S+SS WFL+ES +T WT ENK FE+ALA++ E+TP+RW +VA +PGK
Sbjct: 1 MEILAPSSYFSSSS-WFLEESRSTTRWTAAENKAFENALAVFDENTPNRWERVAERVPGK 59
Query: 61 TVLDVIKQYKELEEDVSDIEAGRVPIPGYLSSS-FTLELVS-------ESDYDANRKRTL 112
TV DV++QYKELE+DVS IEAG VP+PGY +SS FTLE S + Y +++
Sbjct: 60 TVGDVMRQYKELEDDVSSIEAGFVPVPGYSTSSPFTLEWGSGHGFDGFKQSYGTGGRKSS 119
Query: 113 VAKSSDHERKKGVPWTEEEHKRFLMGLIKYGKGDWRNISRNYVISKTPTQVASHAQKYFI 172
+ S+ ERKKGVPWTEEEHK FLMGL KYGKGDWRNISRN+VI++TPTQVASHAQKYFI
Sbjct: 120 SGRPSEQERKKGVPWTEEEHKLFLMGLKKYGKGDWRNISRNFVITRTPTQVASHAQKYFI 179
Query: 173 RQLSGGKDKRRPSIHDITTGNLTNSV--SSDNHKPSSFDQSNVIPAQQKSLGTPKVGLEW 230
RQLSGGKDKRR SIHDITT NL+++ S DN KP S ++ Q S K+ +W
Sbjct: 180 RQLSGGKDKRRASIHDITTVNLSDNQTPSPDNKKPPSSPDHSMAQQQTSSTSIHKLPFQW 239
Query: 231 TDSNNGEVM--ASDSTQSNMLMPSAFEFGSHGLKLQGQNL 268
++N +M AS NM + F S+G K+QGQ +
Sbjct: 240 DQTSNETIMGFASSGHHGNMFQSNPFGMNSYGFKMQGQQM 279
>TAIR|locus:2074723 [details] [associations]
symbol:AT3G11280 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009751 "response to salicylic acid stimulus" evidence=IEP]
[GO:0009739 "response to gibberellin stimulus" evidence=IEP]
[GO:0019344 "cysteine biosynthetic process" evidence=RCA]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
GO:GO:0005634 EMBL:CP002686 GO:GO:0003677 GO:GO:0003700
GO:GO:0003682 GO:GO:0009751 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0009739 InterPro:IPR017884 PROSITE:PS51293 EMBL:AC073395
InterPro:IPR017930 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 UniGene:At.23548 EMBL:AY056180 EMBL:AY091265
EMBL:AY550308 IPI:IPI00541857 RefSeq:NP_187737.1 RefSeq:NP_850558.1
ProteinModelPortal:Q9C773 SMR:Q9C773 STRING:Q9C773 PRIDE:Q9C773
DNASU:820299 EnsemblPlants:AT3G11280.1 EnsemblPlants:AT3G11280.2
GeneID:820299 KEGG:ath:AT3G11280 TAIR:At3g11280 InParanoid:Q9C773
OMA:FEAAINF PhylomeDB:Q9C773 ProtClustDB:CLSN2684400
ArrayExpress:Q9C773 Genevestigator:Q9C773 Uniprot:Q9C773
Length = 263
Score = 732 (262.7 bits), Expect = 2.0e-72, P = 2.0e-72
Identities = 158/280 (56%), Positives = 195/280 (69%)
Query: 1 METLYPASYMSNSSNWFL-QE-----SSRSTSWTKEENKRFESALAIYSESTPDRWIKVA 54
METL+P S++ S + F+ QE SS S SWTKEENK FE ALAIY+E +PDRW KVA
Sbjct: 1 METLHPFSHLPISDHRFVVQEMVSLHSSSSGSWTKEENKMFERALAIYAEDSPDRWFKVA 60
Query: 55 AMIPGKTVLDVIKQYKELEEDVSDIEAGRVPIPGYLSSSFTLELVSESDYDANRKRTLVA 114
+MIPGKTV DV+KQY +LEEDV DIEAGRVPIPGY ++S L D D RKR A
Sbjct: 61 SMIPGKTVFDVMKQYSKLEEDVFDIEAGRVPIPGYPAASSPLGF----DTDMCRKRPSGA 116
Query: 115 KSSDHERKKGVPWTEEEHKRFLMGLIKYGKGDWRNISRNYVISKTPTQVASHAQKYFIRQ 174
+ SD +RKKGVPWTEEEH+RFL+GL+KYGKGDWRNISRN+V+SKTPTQVASHAQKY+ RQ
Sbjct: 117 RGSDQDRKKGVPWTEEEHRRFLLGLLKYGKGDWRNISRNFVVSKTPTQVASHAQKYYQRQ 176
Query: 175 LSGGKDKRRPSIHDITTGNLTNSVSSDNHKPSSFDQSNVIPAQQKSLGTPKVGLEWTDSN 234
LSG KDKRRPSIHDITTGNL N+ N S D +++P LG ++ D+
Sbjct: 177 LSGAKDKRRPSIHDITTGNLLNA----NLNRSFSDHRDILP----DLGF----IDKDDTE 224
Query: 235 NGEV-MASDSTQSNMLMPSAFEFGSHGLKLQGQNLYATTA 273
G + M + + N+ PS F + + G+N+++ A
Sbjct: 225 EGVIFMGQNLSSENLFSPSPTSFEA-AINFAGENVFSAGA 263
>TAIR|locus:2166459 [details] [associations]
symbol:AT5G05790 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017884 PROSITE:PS51293 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AB005237
HOGENOM:HOG000237920 ProtClustDB:CLSN2684400 EMBL:AY519531
EMBL:BT026054 IPI:IPI00544524 RefSeq:NP_196198.1 UniGene:At.32952
ProteinModelPortal:Q9FFJ9 SMR:Q9FFJ9 EnsemblPlants:AT5G05790.1
GeneID:830464 KEGG:ath:AT5G05790 TAIR:At5g05790 eggNOG:NOG242423
InParanoid:Q9FFJ9 OMA:ISRNFVG PhylomeDB:Q9FFJ9 ArrayExpress:Q9FFJ9
Genevestigator:Q9FFJ9 Uniprot:Q9FFJ9
Length = 277
Score = 710 (255.0 bits), Expect = 4.3e-70, P = 4.3e-70
Identities = 156/281 (55%), Positives = 196/281 (69%)
Query: 1 METLYPA-SYMSNSSNWFL-QESS--RSTSWTKEENKRFESALAIYSESTPDRWIKVAAM 56
METL+P S++ S + F+ QE +S+SWTKEENK+FE ALA+Y++ TPDRW KVAAM
Sbjct: 1 METLHPLLSHVPTSDHRFVVQEMMCLQSSSWTKEENKKFERALAVYADDTPDRWFKVAAM 60
Query: 57 IPGKTVLDVIKQYKELEEDVSDIEAGRVPIPGYLSSS---FTLELVSESDYDANRKRTLV 113
IPGKT+ DV++QY +LEED+ DIEAG VPIPGY S + F ++VS D+DA RK
Sbjct: 61 IPGKTISDVMRQYSKLEEDLFDIEAGLVPIPGYRSVTPCGFD-QVVSPRDFDAYRKLPNG 119
Query: 114 AKSSDHERKKGVPWTEEEHKRFLMGLIKYGKGDWRNISRNYVISKTPTQVASHAQKYFIR 173
A+ D +R+KGVPWTEEEH+RFL+GL+KYGKGDWRNISRN+V SKTPTQVASHAQKY+ R
Sbjct: 120 ARGFDQDRRKGVPWTEEEHRRFLLGLLKYGKGDWRNISRNFVGSKTPTQVASHAQKYYQR 179
Query: 174 QLSGGKDKRRPSIHDITTGNLTNSVSSDNHKPSSFDQSNVIPAQQKSLGTPKVGLEWTDS 233
QLSG KDKRRPSIHDITT NL N+ S +PSS D ++ Q + PK+G +TD
Sbjct: 180 QLSGAKDKRRPSIHDITTVNLLNANLS---RPSS-DHGCLVSKQAE----PKLG--FTDR 229
Query: 234 NNGEVMASDSTQSNMLMPSAFEFGSHGLKLQGQNLYATTAY 274
+N E Q+ + S F +K G N+Y Y
Sbjct: 230 DNAEEGVMFLGQN---LSSVFSSYDPAIKFSGANVYGEGGY 267
>TAIR|locus:2042872 [details] [associations]
symbol:AT2G38090 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
GO:GO:0005634 EMBL:CP002685 GO:GO:0003677 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:BT006122 EMBL:AY519529
EMBL:AK118135 IPI:IPI00542058 RefSeq:NP_181344.2 UniGene:At.46819
ProteinModelPortal:Q8GXN7 SMR:Q8GXN7 EnsemblPlants:AT2G38090.1
GeneID:818387 KEGG:ath:AT2G38090 TAIR:At2g38090
HOGENOM:HOG000237920 InParanoid:Q8GXN7 OMA:HRQFLMG PhylomeDB:Q8GXN7
ProtClustDB:CLSN2918198 Genevestigator:Q8GXN7 Uniprot:Q8GXN7
Length = 298
Score = 682 (245.1 bits), Expect = 4.0e-67, P = 4.0e-67
Identities = 135/219 (61%), Positives = 168/219 (76%)
Query: 1 METLYPASYMSNSSNWFLQESSRSTSWTKEENKRFESALAIYSESTPDRWIKVAAMIPGK 60
+E + PA+Y+ +SNW QE+ R T WT EENK+FE+ALA Y + TPDRW +VAAM+PGK
Sbjct: 5 IEVMSPATYLE-TSNWLFQEN-RGTKWTAEENKKFENALAFYDKDTPDRWSRVAAMLPGK 62
Query: 61 TVLDVIKQYKELEEDVSDIEAGRVPIPGYLSSSFTLE------LVSESDYDANR------ 108
TV DVIKQY+ELEEDVSDIEAG +PIPGY S SFTL+ + ++ N
Sbjct: 63 TVGDVIKQYRELEEDVSDIEAGLIPIPGYASDSFTLDWGGYDGASGNNGFNMNGYYFSAA 122
Query: 109 --KRTLVAKSSDHERKKGVPWTEEEHKRFLMGLIKYGKGDWRNISRNYVISKTPTQVASH 166
KR A++++HERKKGVPWTEEEH++FLMGL KYGKGDWRNI+RN+V ++TPTQVASH
Sbjct: 123 GGKRGSAARTAEHERKKGVPWTEEEHRQFLMGLKKYGKGDWRNIARNFVTTRTPTQVASH 182
Query: 167 AQKYFIRQLSGGKDKRRPSIHDITTGNLTNS---VSSDN 202
AQKYFIRQ++GGKDKRR SIHDITT N+ +S ++DN
Sbjct: 183 AQKYFIRQVNGGKDKRRSSIHDITTVNIPDSPDAAAADN 221
>TAIR|locus:2154508 [details] [associations]
symbol:AT5G58900 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR001005
InterPro:IPR009057 Pfam:PF00249 SMART:SM00717 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AB016885
HOGENOM:HOG000237920 EMBL:BT005473 EMBL:AY519533 EMBL:AK118891
IPI:IPI00547099 RefSeq:NP_200698.1 UniGene:At.7757
ProteinModelPortal:Q9FIL9 SMR:Q9FIL9 DNASU:836007
EnsemblPlants:AT5G58900.1 GeneID:836007 KEGG:ath:AT5G58900
TAIR:At5g58900 eggNOG:NOG325121 InParanoid:Q9FIL9 OMA:PFTLDWA
PhylomeDB:Q9FIL9 ProtClustDB:CLSN2914846 ArrayExpress:Q9FIL9
Genevestigator:Q9FIL9 Uniprot:Q9FIL9
Length = 288
Score = 652 (234.6 bits), Expect = 6.0e-64, P = 6.0e-64
Identities = 139/267 (52%), Positives = 176/267 (65%)
Query: 1 METLYPASYMSNSSNWFLQE-------SSRSTSWTKEENKRFESALAIYSESTPDRWIKV 53
ME + P++ + NW ++E S +WT ENK FE+ALA+Y ++TPDRW KV
Sbjct: 1 MEVMRPSTSHVSGGNWLMEETKSGVAASGEGATWTAAENKAFENALAVYDDNTPDRWQKV 60
Query: 54 AAMIPGKTVLDVIKQYKELEEDVSDIEAGRVPIPGYLSSS-FTLELVS--------ESDY 104
AA+IPGKTV DVI+QY +LE DVS IEAG +P+PGY++S FTL+ + +
Sbjct: 61 AAVIPGKTVSDVIRQYNDLEADVSSIEAGLIPVPGYITSPPFTLDWAGGGGGCNGFKPGH 120
Query: 105 DANRKRTLVAKSSDHERKKGVPWTEEEHKRFLMGLIKYGKGDWRNISRNYVISKTPTQVA 164
KR+ +S + ERKKGVPWTEEEHK FLMGL KYGKGDWRNISRN+VI++TPTQVA
Sbjct: 121 QVCNKRSQAGRSPELERKKGVPWTEEEHKLFLMGLKKYGKGDWRNISRNFVITRTPTQVA 180
Query: 165 SHAQKYFIRQLSGGKDKRRPSIHDITTGNLTNSVSSDNHKPSSFDQSNVIPAQQKSLGTP 224
SHAQKYFIRQLSGGKDKRR SIHDITT NL S + +K S+++ Q+S T
Sbjct: 181 SHAQKYFIRQLSGGKDKRRASIHDITTVNLEEEASLETNK------SSIVVGDQRSRLT- 233
Query: 225 KVGLEW--TDSNNGEVMASDSTQSNML 249
W TD+N + A + T N +
Sbjct: 234 --AFPWNQTDNNGTQADAFNITIGNAI 258
>TAIR|locus:2150149 [details] [associations]
symbol:AT5G01200 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017884 PROSITE:PS51293 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AL137189
HOGENOM:HOG000237920 EMBL:AY519530 IPI:IPI00517812 PIR:T45960
RefSeq:NP_195740.1 UniGene:At.27639 ProteinModelPortal:Q9LFB6
SMR:Q9LFB6 EnsemblPlants:AT5G01200.1 GeneID:831676
KEGG:ath:AT5G01200 TAIR:At5g01200 eggNOG:NOG260690
InParanoid:Q9LFB6 OMA:SAANSDY PhylomeDB:Q9LFB6
ProtClustDB:CLSN2916637 ArrayExpress:Q9LFB6 Genevestigator:Q9LFB6
Uniprot:Q9LFB6
Length = 267
Score = 333 (122.3 bits), Expect = 8.8e-55, Sum P(2) = 8.8e-55
Identities = 60/83 (72%), Positives = 74/83 (89%)
Query: 118 DHERKKGVPWTEEEHKRFLMGLIKYGKGDWRNISRNYVISKTPTQVASHAQKYFIRQLSG 177
+ ERKKGVPWTE+EH RFLMGL KYGKGDWRNI++++V ++TPTQVASHAQKYF+RQL+
Sbjct: 139 EKERKKGVPWTEDEHLRFLMGLKKYGKGDWRNIAKSFVTTRTPTQVASHAQKYFLRQLTD 198
Query: 178 GKDKRRPSIHDITTGNLTNSVSS 200
GKDKRR SIHDITT N+ ++ +S
Sbjct: 199 GKDKRRSSIHDITTVNIPDADAS 221
Score = 250 (93.1 bits), Expect = 8.8e-55, Sum P(2) = 8.8e-55
Identities = 68/145 (46%), Positives = 85/145 (58%)
Query: 3 TLYPASYMSN--SSNWFLQESSRSTSWTKEENKRFESALAIYSESTP-DRWIKVAAMIPG 59
T+Y M + ++NW QE R +WT EENKRFE ALA + + W K+A +IPG
Sbjct: 5 TMYRGVNMFSPANTNWIFQEV-REATWTAEENKRFEKALAYLDDKDNLESWSKIADLIPG 63
Query: 60 KTVLDVIKQYKELEEDVSDIEAGRVPIPGY---LSSS------FTLELVSES-DYDANRK 109
KTV DVIK+YKELE+DVSDIEAG +PIPGY SS+ F LE S DY K
Sbjct: 64 KTVADVIKRYKELEDDVSDIEAGLIPIPGYGGDASSAANSDYFFGLENSSYGYDYVVGGK 123
Query: 110 RTLVAKSSDHERKKGVPWTEEEHKR 134
R+ A + D R P E+E K+
Sbjct: 124 RSSPAMT-DCFRS---PMPEKERKK 144
>TAIR|locus:2028461 [details] [associations]
symbol:AT1G49010 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009651 "response
to salt stress" evidence=IEP] [GO:0009733 "response to auxin
stimulus" evidence=IEP] [GO:0009739 "response to gibberellin
stimulus" evidence=IEP] [GO:0009751 "response to salicylic acid
stimulus" evidence=IEP] [GO:0009753 "response to jasmonic acid
stimulus" evidence=IEP] [GO:0046686 "response to cadmium ion"
evidence=IEP] [GO:0016556 "mRNA modification" evidence=RCA]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046686
GO:GO:0009733 GO:GO:0009753 GO:GO:0003677 GO:GO:0009651
GO:GO:0003700 GO:GO:0003682 GO:GO:0009751 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0009739 EMBL:AC016041 InterPro:IPR017884
PROSITE:PS51293 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 HOGENOM:HOG000237920
EMBL:AY086906 EMBL:AY519528 EMBL:BT024862 IPI:IPI00544296
PIR:F96527 RefSeq:NP_564537.1 UniGene:At.38318
ProteinModelPortal:Q9M9A3 SMR:Q9M9A3 STRING:Q9M9A3 PRIDE:Q9M9A3
EnsemblPlants:AT1G49010.1 GeneID:841324 KEGG:ath:AT1G49010
TAIR:At1g49010 eggNOG:NOG253185 InParanoid:Q9M9A3 OMA:YVVPVAY
PhylomeDB:Q9M9A3 ProtClustDB:CLSN2688585 ArrayExpress:Q9M9A3
Genevestigator:Q9M9A3 Uniprot:Q9M9A3
Length = 314
Score = 313 (115.2 bits), Expect = 4.1e-43, Sum P(2) = 4.1e-43
Identities = 58/90 (64%), Positives = 73/90 (81%)
Query: 117 SDHERKKGVPWTEEEHKRFLMGLIKYGKGDWRNISRNYVISKTPTQVASHAQKYFIRQLS 176
++ ER+KG+PWTEEEH+ FL+GL K+GKGDWR+ISRN+VIS+TPTQVASHAQKYFIR S
Sbjct: 126 AEQERRKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTPTQVASHAQKYFIRLNS 185
Query: 177 GGKDKRRPSIHDITT-GNLTNSVSSDNHKP 205
+D+RR SIHDITT N +V+ +P
Sbjct: 186 MNRDRRRSSIHDITTVNNQAPAVTGGGQQP 215
Score = 159 (61.0 bits), Expect = 4.1e-43, Sum P(2) = 4.1e-43
Identities = 39/106 (36%), Positives = 59/106 (55%)
Query: 26 SWTKEENKRFESALAIY---SESTPDRWIKVAAMIPGKTVLDVIKQYKELEEDVSDIEAG 82
+W++EE K FE+A+A++ E T D+W K+++M+P K + +V K Y+ L EDV IE G
Sbjct: 7 TWSREEEKAFENAIALHCVEEEITEDQWNKMSSMVPSKALEEVKKHYQILLEDVKAIENG 66
Query: 83 RVPIPGYLSSSFTLELVSESDYDANRKRTLVAKSSDHERKKGVPWT 128
+VP+P Y + V E+ A + SS KK P T
Sbjct: 67 QVPLPRYHHRKGLI--VDEAAAAATSPANRDSHSSGSSEKKPNPGT 110
>TAIR|locus:2159607 [details] [associations]
symbol:AT5G08520 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017884 PROSITE:PS51293 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AB006697
HOGENOM:HOG000237920 EMBL:AY072090 EMBL:AY096571 EMBL:AY519532
IPI:IPI00516280 RefSeq:NP_196469.1 UniGene:At.8762
ProteinModelPortal:Q9FNN6 SMR:Q9FNN6 STRING:Q9FNN6 PaxDb:Q9FNN6
PRIDE:Q9FNN6 EnsemblPlants:AT5G08520.1 GeneID:830751
KEGG:ath:AT5G08520 TAIR:At5g08520 eggNOG:NOG259915
InParanoid:Q9FNN6 OMA:NSMNRER PhylomeDB:Q9FNN6
ProtClustDB:CLSN2687300 ArrayExpress:Q9FNN6 Genevestigator:Q9FNN6
Uniprot:Q9FNN6
Length = 298
Score = 431 (156.8 bits), Expect = 8.5e-43, Sum P(2) = 8.5e-43
Identities = 89/185 (48%), Positives = 126/185 (68%)
Query: 18 LQESSRSTSWTKEENKRFESALAIYSESTPDRWIKVAAMIPGKTVLDVIKQYKELEEDVS 77
++E S + W++E++ FE ALA ++ + +RW K+AA +PGK+V + + Y+ L EDV+
Sbjct: 3 VEEVSDGSVWSREDDIAFERALANNTDESEERWEKIAADVPGKSVEQIKEHYELLVEDVT 62
Query: 78 DIEAGRVPIPGYLSSSFTLELVSESDYDANR-------KRTLVAKS-SDHERKKGVPWTE 129
IE+G VP+P Y S + + + + + KS SD ER+KG+ WTE
Sbjct: 63 RIESGCVPLPAYGSPEGSNGHAGDEGASSKKGGNSHAGESNQAGKSKSDQERRKGIAWTE 122
Query: 130 EEHKRFLMGLIKYGKGDWRNISRNYVISKTPTQVASHAQKYFIRQLSGGKDKRRPSIHDI 189
+EH+ FL+GL KYGKGDWR+ISRN+V+++TPTQVASHAQKYFIR S KD+RR SIHDI
Sbjct: 123 DEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSIHDI 182
Query: 190 TT-GN 193
T+ GN
Sbjct: 183 TSVGN 187
Score = 38 (18.4 bits), Expect = 8.5e-43, Sum P(2) = 8.5e-43
Identities = 11/40 (27%), Positives = 20/40 (50%)
Query: 196 NSVSSDNHKPSSFDQSNVIPAQQKSLGTPKVGLEWTDSNN 235
NS++ D + S D ++V A + P G +++NN
Sbjct: 168 NSMNKDRRRSSIHDITSVGNADVSTPQGPITGQNNSNNNN 207
>TAIR|locus:2175478 [details] [associations]
symbol:AT5G04760 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010286 "heat acclimation" evidence=RCA] InterPro:IPR001005
InterPro:IPR009057 Pfam:PF00249 SMART:SM00717 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AL162972
EMBL:AB008271 UniGene:At.20111 UniGene:At.68528
HOGENOM:HOG000237920 EMBL:AY050976 EMBL:AY091177 EMBL:AY088362
EMBL:AB493736 IPI:IPI00530948 PIR:T48472 RefSeq:NP_196096.1
ProteinModelPortal:Q9LZ21 SMR:Q9LZ21 IntAct:Q9LZ21
EnsemblPlants:AT5G04760.1 GeneID:830354 KEGG:ath:AT5G04760
TAIR:At5g04760 eggNOG:NOG276102 InParanoid:Q9LZ21 OMA:WRNISRW
PhylomeDB:Q9LZ21 ProtClustDB:CLSN2686445 ArrayExpress:Q9LZ21
Genevestigator:Q9LZ21 Uniprot:Q9LZ21
Length = 215
Score = 437 (158.9 bits), Expect = 3.6e-41, P = 3.6e-41
Identities = 87/198 (43%), Positives = 131/198 (66%)
Query: 24 STSWTKEENKRFESALAIYSESTPDRWIKVAAMIPGKTVLDVIKQYKELEEDVSDIEAGR 83
S+ WT+ E+K FE AL ++ E +P+RW ++A + K+ +V + Y+ L DV +I++GR
Sbjct: 3 SSQWTRSEDKMFEQALVLFPEGSPNRWERIADQLH-KSAGEVREHYEVLVHDVFEIDSGR 61
Query: 84 VPIPGYLSSSFTLELVSESDYDANRKRTLVAKSSDHERKKGVPWTEEEHKRFLMGLIKYG 143
V +P Y+ S + + +D+ + + +K + ERK+G PWTE EHK FL+GL +YG
Sbjct: 62 VDVPDYMDDS----AAAAAGWDSAGQISFGSKHGESERKRGTPWTENEHKLFLIGLKRYG 117
Query: 144 KGDWRNISRNYVISKTPTQVASHAQKYFIRQLSGGKDKRRPSIHDITTGNLTNSVSSDNH 203
KGDWR+ISRN V+++TPTQVASHAQKYF+RQ S K+++R SIHDITT + T ++ N
Sbjct: 118 KGDWRSISRNVVVTRTPTQVASHAQKYFLRQNSVKKERKRSSIHDITTVDATLAMPGSNM 177
Query: 204 KPSSFDQSNVIPAQQKSL 221
+ S V QQ+ +
Sbjct: 178 DWTGQHGSPVQAPQQQQI 195
>TAIR|locus:2171711 [details] [associations]
symbol:AT5G23650 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017884 PROSITE:PS51293 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AB025633
HOGENOM:HOG000237920 EMBL:DQ056685 IPI:IPI00534696
RefSeq:NP_197754.1 UniGene:At.54959 ProteinModelPortal:Q9LT00
SMR:Q9LT00 EnsemblPlants:AT5G23650.1 GeneID:832430
KEGG:ath:AT5G23650 TAIR:At5g23650 eggNOG:NOG311780
InParanoid:Q9LT00 OMA:HYNILAR PhylomeDB:Q9LT00
ProtClustDB:CLSN2914851 Genevestigator:Q9LT00 Uniprot:Q9LT00
Length = 337
Score = 395 (144.1 bits), Expect = 1.0e-36, P = 1.0e-36
Identities = 90/203 (44%), Positives = 126/203 (62%)
Query: 19 QESSRSTSWTKEENKRFESALAIYSESTPDRWIKVAAMIPGKTVLDVIKQYKELEEDVSD 78
QE S +SW+K+++ FE ALAIY++ T RW K+A ++PGKT+ VI+ Y L DV
Sbjct: 5 QEISVGSSWSKDDDIAFEKALAIYNDKTEIRWKKIATVVPGKTLEQVIEHYNILARDVML 64
Query: 79 IEAGRVPIPGY---LS----SSFTLEL-VSESDYDANRKRTLVAKSS-DHERKKGVPWTE 129
IE+G V +P Y L ++F E + E D + KS +R++GVPW
Sbjct: 65 IESGCVRLPDYDDFLEEPNHNAFGKERSILEGGNDRKYESKHKGKSKLKQKRRRGVPWKP 124
Query: 130 EEHKRFLMGLIKYGKGDWRNISRNYVISKTPTQVASHAQKYFIRQLSGGKDKRRPSIHDI 189
EH++FL GL KYGKGDWR+ISR+ V+++T TQVASHAQKYF S K ++RPSIHDI
Sbjct: 125 FEHRQFLHGLKKYGKGDWRSISRHCVVTRTSTQVASHAQKYFAHINSEDKKRKRPSIHDI 184
Query: 190 TTGNLTNSVSSDNHKPSSFDQSN 212
T S+S+ +P ++ + N
Sbjct: 185 TIAE-NKSIST-KQRPITWQKIN 205
>TAIR|locus:2075775 [details] [associations]
symbol:AT3G10580 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0003682 EMBL:AC011560 EMBL:AC013428 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 HOGENOM:HOG000237920
ProtClustDB:CLSN2684024 IPI:IPI00530835 RefSeq:NP_187669.1
UniGene:At.53250 ProteinModelPortal:Q9SQY8 SMR:Q9SQY8
EnsemblPlants:AT3G10580.1 GeneID:820225 KEGG:ath:AT3G10580
TAIR:At3g10580 InParanoid:Q9SQY8 OMA:NIAQFLQ PhylomeDB:Q9SQY8
Genevestigator:Q9SQY8 Uniprot:Q9SQY8
Length = 287
Score = 334 (122.6 bits), Expect = 3.0e-30, P = 3.0e-30
Identities = 82/192 (42%), Positives = 118/192 (61%)
Query: 27 WTKEENKRFESALAIY-SESTPDRWIKVAAMIPGKTVLDVIKQYKELEEDVSDIEAGRVP 85
W ++++KRFE AL + +E +PD +A + K + +V Y+ L +DV+ IE+G+ P
Sbjct: 8 WKRDDDKRFELALVRFPAEGSPDFLENIAQFLQ-KPLKEVYSYYQALVDDVTLIESGKYP 66
Query: 86 IPGYLSSSFTLELVSESDYDANRKRTLVAKSSDHERKKGVPWTEEEHKRFLMGLIKYGKG 145
+P Y E DY + + T +K+ +KKG+PW+ EEH+ FL GL KYGKG
Sbjct: 67 LPKY----------PEDDYVSLPEATK-SKTQGTGKKKGIPWSPEEHRLFLDGLNKYGKG 115
Query: 146 DWRNISRNYVISKTPTQVASHAQKYFIRQLSGGKDKRRPSIHDITTG---NLTNSVSSDN 202
DW++ISR V S++P QVASHAQKYF+RQ + K +R SIHD+T G N+T VS+ N
Sbjct: 116 DWKSISRECVTSRSPMQVASHAQKYFLRQKN--KKGKRFSIHDMTLGDAENVTVPVSNLN 173
Query: 203 ---HKPSSFDQS 211
+P DQS
Sbjct: 174 SMGQQPHFDDQS 185
>TAIR|locus:2133667 [details] [associations]
symbol:AT4G09450 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AL161514
HOGENOM:HOG000237920 EMBL:AY122911 IPI:IPI00520050 PIR:C85096
RefSeq:NP_192683.1 UniGene:At.33693 ProteinModelPortal:Q9M0P7
SMR:Q9M0P7 DNASU:826528 EnsemblPlants:AT4G09450.1 GeneID:826528
KEGG:ath:AT4G09450 TAIR:At4g09450 eggNOG:NOG301281
InParanoid:Q9M0P7 OMA:EGLNKFG PhylomeDB:Q9M0P7
ProtClustDB:CLSN2684024 Genevestigator:Q9M0P7 Uniprot:Q9M0P7
Length = 200
Score = 325 (119.5 bits), Expect = 2.7e-29, P = 2.7e-29
Identities = 84/203 (41%), Positives = 113/203 (55%)
Query: 27 WTKEENKRFESALAIYSESTPDRWIKVAAMIPGKTVLDVIKQYKELEEDVSDIEAGRVPI 86
WT+ ++KRFE AL E +P+ +I+ A K V +V Y L D+ IE+G+ +
Sbjct: 7 WTRVDDKRFELALLQIPEGSPN-FIENIAYYLQKPVKEVEYYYCALVHDIERIESGKYVL 65
Query: 87 PGYLSSSFTLELVSESDYDANRKRTLVAKSSDHERKKGVPWTEEEHKRFLMGLIKYGKGD 146
P Y E DY K T +S + +K G+PW+EEE + FL GL K+GKGD
Sbjct: 66 PKY----------PEDDYV---KLTEAGESKGNGKKTGIPWSEEEQRLFLEGLNKFGKGD 112
Query: 147 WRNISRNYVISKTPTQVASHAQKYFIRQLSGGKDKRRPSIHDITTGNLTN----SVSSDN 202
W+NISR V S+T TQVASHAQKYF RQ + +RPSIHD+T G N ++ S
Sbjct: 113 WKNISRYCVKSRTSTQVASHAQKYFARQKQESTNTKRPSIHDMTLGVAVNVPGSNLESTG 172
Query: 203 HKPSSFDQ--SN-VIPAQQKSLG 222
+P DQ SN P+Q+ G
Sbjct: 173 QQPHFGDQIPSNQYYPSQENFRG 195
>TAIR|locus:2094942 [details] [associations]
symbol:AT3G16350 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0009651 "response to salt stress"
evidence=IEP] [GO:0009723 "response to ethylene stimulus"
evidence=IEP] [GO:0009733 "response to auxin stimulus"
evidence=IEP] [GO:0009739 "response to gibberellin stimulus"
evidence=IEP] [GO:0009753 "response to jasmonic acid stimulus"
evidence=IEP] [GO:0046686 "response to cadmium ion" evidence=IEP]
InterPro:IPR001005 InterPro:IPR001878 InterPro:IPR009057
Pfam:PF00249 SMART:SM00343 SMART:SM00717 GO:GO:0046686
EMBL:CP002686 GO:GO:0009733 GO:GO:0009753 GO:GO:0009723
GO:GO:0003677 GO:GO:0009651 GO:GO:0008270 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009739
InterPro:IPR017930 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 EMBL:BT005832 IPI:IPI00535787 RefSeq:NP_188256.1
UniGene:At.47678 ProteinModelPortal:Q84TG2 SMR:Q84TG2 PRIDE:Q84TG2
EnsemblPlants:AT3G16350.1 GeneID:820882 KEGG:ath:AT3G16350
TAIR:At3g16350 InParanoid:Q84TG2 OMA:GMATRHE PhylomeDB:Q84TG2
ProtClustDB:CLSN2913348 Genevestigator:Q84TG2 Uniprot:Q84TG2
Length = 387
Score = 296 (109.3 bits), Expect = 3.2e-26, P = 3.2e-26
Identities = 62/127 (48%), Positives = 80/127 (62%)
Query: 120 ERKKGVPWTEEEHKRFLMGLIKYGKGDWRNISRNYVISKTPTQVASHAQKYFIRQLSGGK 179
ERK+GVPWTEEEH+ FL+GL K GKGDWR ISRNYV S+TPTQVASHAQKYFIR S +
Sbjct: 132 ERKRGVPWTEEEHRLFLVGLQKLGKGDWRGISRNYVTSRTPTQVASHAQKYFIRHTSSSR 191
Query: 180 DKRRPSIHDITTGNLTNSVSSDNHKPSSFDQSNVIPAQQKSLGTPKVGLEWTDSNNGE-V 238
KRR S+ D+ T + SS + + + S+ +K P + L ++ E V
Sbjct: 192 RKRRSSLFDMVTDEMVTD-SSPTQEEQTLNGSSPSKEPEKKSYLPSLELSLNNTTEAEEV 250
Query: 239 MASDSTQ 245
+A+ Q
Sbjct: 251 VATAPRQ 257
>TAIR|locus:2171519 [details] [associations]
symbol:AT5G47390 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0009651 "response to salt stress"
evidence=IEP] [GO:0009723 "response to ethylene stimulus"
evidence=IEP] [GO:0009737 "response to abscisic acid stimulus"
evidence=IEP] [GO:0009739 "response to gibberellin stimulus"
evidence=IEP] [GO:0009751 "response to salicylic acid stimulus"
evidence=IEP] [GO:0009753 "response to jasmonic acid stimulus"
evidence=IEP] [GO:0046686 "response to cadmium ion" evidence=IEP]
InterPro:IPR001005 InterPro:IPR001878 InterPro:IPR009057
Pfam:PF00249 PROSITE:PS50158 SMART:SM00343 SMART:SM00717
GO:GO:0009737 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046686
GO:GO:0009753 GO:GO:0009723 GO:GO:0003677 GO:GO:0009651
GO:GO:0008270 GO:GO:0003700 GO:GO:0003682 GO:GO:0009751
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009739 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AB018117
HOGENOM:HOG000237594 EMBL:AY072077 EMBL:AY096661 EMBL:AY084295
EMBL:AY519516 EMBL:AK226931 IPI:IPI00516324 RefSeq:NP_199550.1
UniGene:At.23392 ProteinModelPortal:Q9LVS0 SMR:Q9LVS0 STRING:Q9LVS0
PaxDb:Q9LVS0 PRIDE:Q9LVS0 EnsemblPlants:AT5G47390.1 GeneID:834786
KEGG:ath:AT5G47390 TAIR:At5g47390 eggNOG:NOG267183
InParanoid:Q9LVS0 OMA:SSRQSAF PhylomeDB:Q9LVS0
ProtClustDB:CLSN2686371 ArrayExpress:Q9LVS0 Genevestigator:Q9LVS0
Uniprot:Q9LVS0
Length = 365
Score = 289 (106.8 bits), Expect = 1.8e-25, P = 1.8e-25
Identities = 58/115 (50%), Positives = 75/115 (65%)
Query: 112 LVAKSSDHERKKGVPWTEEEHKRFLMGLIKYGKGDWRNISRNYVISKTPTQVASHAQKYF 171
+ SS ERKKG PWTEEEH+ FL+GL K GKGDWR ISRNYV ++TPTQVASHAQKYF
Sbjct: 83 VAGSSSSRERKKGTPWTEEEHRMFLLGLQKLGKGDWRGISRNYVTTRTPTQVASHAQKYF 142
Query: 172 IRQLSGGKDKRRPSIHDITTGNLTNSVSSDNHKPSSFDQSNVIPAQQKSLGTPKV 226
IRQ + + KRR S+ D+ + + D +P ++ N IP + + G +
Sbjct: 143 IRQSNVSRRKRRSSLFDMVPDEV-GDIPMDLQEP---EEDN-IPVETEMQGADSI 192
>TAIR|locus:2011216 [details] [associations]
symbol:AT1G19000 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
EMBL:CP002684 GO:GO:0003677 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AC068602
EMBL:AY045881 EMBL:AY079415 EMBL:AK316815 IPI:IPI00546856
PIR:G86323 RefSeq:NP_173334.1 RefSeq:NP_849689.1 UniGene:At.23413
ProteinModelPortal:Q9LMC7 SMR:Q9LMC7 IntAct:Q9LMC7 STRING:Q9LMC7
PRIDE:Q9LMC7 EnsemblPlants:AT1G19000.1 EnsemblPlants:AT1G19000.2
GeneID:838481 KEGG:ath:AT1G19000 TAIR:At1g19000 InParanoid:Q9LMC7
OMA:GYASAND PhylomeDB:Q9LMC7 ProtClustDB:CLSN2682289
ArrayExpress:Q9LMC7 Genevestigator:Q9LMC7 Uniprot:Q9LMC7
Length = 285
Score = 288 (106.4 bits), Expect = 2.2e-25, P = 2.2e-25
Identities = 59/119 (49%), Positives = 80/119 (67%)
Query: 102 SDYDANRKRTLVAKSSDHERKKGVPWTEEEHKRFLMGLIKYGKGDWRNISRNYVISKTPT 161
+D A+ + SS RK+GVPWTE EHKRFL+GL K GKGDW+ ISRN+V S+TPT
Sbjct: 79 ADGYASANDAVQISSSSGGRKRGVPWTENEHKRFLIGLQKVGKGDWKGISRNFVKSRTPT 138
Query: 162 QVASHAQKYFIRQLSGGKDKRRPSIHDITTGNLTN-SVSSD-NHKPSSFDQSNVIPAQQ 218
QVASHAQKYF+R+ + + +RR S+ DITT +T ++ D + S ++N+ QQ
Sbjct: 139 QVASHAQKYFLRRTNLNRRRRRSSLFDITTETVTEMAMEQDPTQENSPLPETNISSGQQ 197
>TAIR|locus:2020653 [details] [associations]
symbol:AT1G70000 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0003677
"DNA binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0009651 "response to salt stress"
evidence=IEP] [GO:0009723 "response to ethylene stimulus"
evidence=IEP] [GO:0009733 "response to auxin stimulus"
evidence=IEP] [GO:0009737 "response to abscisic acid stimulus"
evidence=IEP] [GO:0009739 "response to gibberellin stimulus"
evidence=IEP] [GO:0009751 "response to salicylic acid stimulus"
evidence=IEP] [GO:0009753 "response to jasmonic acid stimulus"
evidence=IEP] [GO:0046686 "response to cadmium ion" evidence=IEP]
[GO:0080167 "response to karrikin" evidence=IEP] InterPro:IPR001005
InterPro:IPR001878 InterPro:IPR009057 Pfam:PF00249 PROSITE:PS50158
SMART:SM00343 SMART:SM00717 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0009737 GO:GO:0046686 GO:GO:0009733 GO:GO:0009753
GO:GO:0009723 GO:GO:0003677 GO:GO:0009651 GO:GO:0008270
GO:GO:0003700 GO:GO:0003682 GO:GO:0080167 GO:GO:0009751
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009739 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AC002062
EMBL:BT006413 EMBL:AY519509 EMBL:AK227711 IPI:IPI00529630
PIR:F96722 RefSeq:NP_001185359.1 RefSeq:NP_177158.1
UniGene:At.35354 UniGene:At.67206 ProteinModelPortal:O04544
SMR:O04544 PRIDE:O04544 EnsemblPlants:AT1G70000.1
EnsemblPlants:AT1G70000.2 GeneID:843337 KEGG:ath:AT1G70000
TAIR:At1g70000 eggNOG:NOG270059 HOGENOM:HOG000237594
InParanoid:O04544 OMA:SMNNLSQ PhylomeDB:O04544
ProtClustDB:CLSN2913574 ArrayExpress:O04544 Genevestigator:O04544
Uniprot:O04544
Length = 261
Score = 275 (101.9 bits), Expect = 5.3e-24, P = 5.3e-24
Identities = 51/102 (50%), Positives = 68/102 (66%)
Query: 114 AKSSDHERKKGVPWTEEEHKRFLMGLIKYGKGDWRNISRNYVISKTPTQVASHAQKYFIR 173
A + ERK+G PWTEEEH+ FL GL K GKGDWR ISRN+V ++TPTQVASHAQKYF+R
Sbjct: 87 ASGRNRERKRGTPWTEEEHRLFLTGLHKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLR 146
Query: 174 QLSGGKDKRRPSIHDITTGNLTNSVSSDNHKPSSFDQSNVIP 215
+ + + +RR S+ DIT + S +N + + +P
Sbjct: 147 RTNQNRRRRRSSLFDITPDSFIGSSKEENQLQTPLELIRPVP 188
>TAIR|locus:2165106 [details] [associations]
symbol:AT5G56840 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0003677
"DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] InterPro:IPR001005 InterPro:IPR001878
InterPro:IPR009057 Pfam:PF00249 PROSITE:PS50158 SMART:SM00343
SMART:SM00717 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0008270 GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AB013392
HOGENOM:HOG000237594 EMBL:AY519517 EMBL:BT012528 EMBL:BT014956
IPI:IPI00548744 RefSeq:NP_200495.1 UniGene:At.29361
ProteinModelPortal:Q9FJS9 SMR:Q9FJS9 EnsemblPlants:AT5G56840.1
GeneID:835786 KEGG:ath:AT5G56840 TAIR:At5g56840 eggNOG:NOG244478
InParanoid:Q9FJS9 OMA:ESNIRPI PhylomeDB:Q9FJS9
ProtClustDB:CLSN2916792 Genevestigator:Q9FJS9 Uniprot:Q9FJS9
Length = 233
Score = 264 (98.0 bits), Expect = 7.8e-23, P = 7.8e-23
Identities = 74/165 (44%), Positives = 100/165 (60%)
Query: 100 SESDYDANRKRTLVAKSSDHERKKGVPWTEEEHKRFLMGLIKYGKGDWRNISRNYVISKT 159
S S + L K+ D RKKGVPWT EEH+ FL+GL K GKGDWR ISRN+V++K+
Sbjct: 68 SSSSFAGYLSDGLAHKTPD--RKKGVPWTAEEHRTFLIGLEKLGKGDWRGISRNFVVTKS 125
Query: 160 PTQVASHAQKYFIRQLSGGKDKRR-PSIHD-ITTGNLT-NSVSS---DNHKPSSFDQSNV 213
PTQVASHAQKYF+RQ + KRR S+ D ++ GN+ NS + ++H SS S V
Sbjct: 126 PTQVASHAQKYFLRQTTTLHHKRRRTSLFDMVSAGNVEENSTTKRICNDHIGSS---SKV 182
Query: 214 IPAQ---QKSLG--TPKVGLEWTDSNNG---EV-MAS-DSTQSNM 248
+ Q LG PKV + + ++ G E+ +AS S +SN+
Sbjct: 183 VWKQGLLNPRLGYPDPKVSVSGSGNSGGLDLELKLASIQSPESNI 227
>TAIR|locus:2027181 [details] [associations]
symbol:AT1G74840 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0009651 "response to salt stress" evidence=IEP] [GO:0009723
"response to ethylene stimulus" evidence=IEP] [GO:0009733 "response
to auxin stimulus" evidence=IEP] [GO:0009737 "response to abscisic
acid stimulus" evidence=IEP] [GO:0009739 "response to gibberellin
stimulus" evidence=IEP] [GO:0009751 "response to salicylic acid
stimulus" evidence=IEP] [GO:0009753 "response to jasmonic acid
stimulus" evidence=IEP] [GO:0046686 "response to cadmium ion"
evidence=IEP] [GO:0006612 "protein targeting to membrane"
evidence=RCA] [GO:0009963 "positive regulation of flavonoid
biosynthetic process" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009737 GO:GO:0046686
GO:GO:0009733 GO:GO:0009753 GO:GO:0009723 GO:GO:0003677
GO:GO:0009651 GO:GO:0003700 GO:GO:0003682 GO:GO:0009751
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009739 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AC008263
EMBL:AC013258 HOGENOM:HOG000237594 ProtClustDB:CLSN2682289
EMBL:AY070098 EMBL:AY096393 EMBL:AY519510 IPI:IPI00526439
PIR:H96777 RefSeq:NP_177622.1 UniGene:At.11594
ProteinModelPortal:Q9S7N6 SMR:Q9S7N6 IntAct:Q9S7N6 STRING:Q9S7N6
EnsemblPlants:AT1G74840.1 GeneID:843823 KEGG:ath:AT1G74840
TAIR:At1g74840 InParanoid:Q9S7N6 OMA:GTRREIM PhylomeDB:Q9S7N6
ArrayExpress:Q9S7N6 Genevestigator:Q9S7N6 Uniprot:Q9S7N6
Length = 265
Score = 259 (96.2 bits), Expect = 2.6e-22, P = 2.6e-22
Identities = 57/134 (42%), Positives = 82/134 (61%)
Query: 60 KTVLDVIKQYKELEEDVSDIE-AGRVP-IPGYLSSSFTLELVSESDYDANRKRTLVAKSS 117
+ VLD +++ L ++SD E P I G + A+ + + +
Sbjct: 30 RVVLDPMRKCVSLN-NLSDYEQTAETPKIDGEDRDEQDMNKTPAGYASADEALPMSSSNG 88
Query: 118 DHERKKGVPWTEEEHKRFLMGLIKYGKGDWRNISRNYVISKTPTQVASHAQKYFIRQLSG 177
ERK+GVPWTEEEHK FL+GL + GKGDW+ ISRN+V ++T TQVASHAQKYF+R+ +
Sbjct: 89 KIERKRGVPWTEEEHKLFLLGLQRVGKGDWKGISRNFVKTRTSTQVASHAQKYFLRRSNL 148
Query: 178 GKDKRRPSIHDITT 191
+ +RR S+ D+TT
Sbjct: 149 NRRRRRSSLFDMTT 162
>TAIR|locus:2151621 [details] [associations]
symbol:AT5G61620 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] InterPro:IPR001005 InterPro:IPR001878
InterPro:IPR009057 Pfam:PF00249 PROSITE:PS50158 SMART:SM00343
SMART:SM00717 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0008270 GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AB012239 IPI:IPI00529008
RefSeq:NP_200970.1 UniGene:At.55665 ProteinModelPortal:Q9FKF9
SMR:Q9FKF9 PaxDb:Q9FKF9 PRIDE:Q9FKF9 EnsemblPlants:AT5G61620.1
GeneID:836284 KEGG:ath:AT5G61620 TAIR:At5g61620 eggNOG:NOG325297
HOGENOM:HOG000152521 InParanoid:Q9FKF9 OMA:HNGHNAR PhylomeDB:Q9FKF9
ProtClustDB:CLSN2713497 Genevestigator:Q9FKF9 Uniprot:Q9FKF9
Length = 317
Score = 257 (95.5 bits), Expect = 4.3e-22, P = 4.3e-22
Identities = 47/72 (65%), Positives = 58/72 (80%)
Query: 119 HERKKGVPWTEEEHKRFLMGLIKYGKGDWRNISRNYVISKTPTQVASHAQKYFIRQLSGG 178
HE+KKG PWTEEEH+ FL+GL K GKGDWR I++++V ++TPTQVASHAQKYFIR
Sbjct: 102 HEKKKGKPWTEEEHRNFLIGLNKLGKGDWRGIAKSFVSTRTPTQVASHAQKYFIRLNVND 161
Query: 179 KDKRRPSIHDIT 190
K KRR S+ DI+
Sbjct: 162 KRKRRASLFDIS 173
>TAIR|locus:2075760 [details] [associations]
symbol:AT3G10590 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
GO:GO:0005634 EMBL:CP002686 GO:GO:0003677 GO:GO:0003700
GO:GO:0003682 EMBL:AC011560 EMBL:AC013428 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293
InterPro:IPR017930 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 EMBL:AY550300 EMBL:DQ446652 IPI:IPI00540507
RefSeq:NP_187670.1 UniGene:At.50167 ProteinModelPortal:Q9SQY9
SMR:Q9SQY9 PRIDE:Q9SQY9 EnsemblPlants:AT3G10590.1 GeneID:820227
KEGG:ath:AT3G10590 TAIR:At3g10590 InParanoid:Q9SQY9
PhylomeDB:Q9SQY9 ArrayExpress:Q9SQY9 Genevestigator:Q9SQY9
Uniprot:Q9SQY9
Length = 206
Score = 256 (95.2 bits), Expect = 5.5e-22, P = 5.5e-22
Identities = 74/197 (37%), Positives = 106/197 (53%)
Query: 24 STSWTKEENKRFESALAIYSESTPD--RWIKVAAMIPGKTVLDVIKQYKELEEDVSDIEA 81
S WT+++N+RF+SAL S+ PD R + VA +P K + +V Y++L DV +
Sbjct: 4 SPRWTEDDNRRFKSAL---SQFPPDNKRLVNVAQHLP-KPLEEVKYYYEKLVNDVY-LPK 58
Query: 82 GRVPIPGYLSSSFTLE----LVSESDYDANRKRTLV--AKSSDHERKKGV---PWTEEEH 132
+ +L +E + + D N+ V A+SS +R+K PWTEEEH
Sbjct: 59 PLENVTQHLQKPMEMEEMKYMYEKMANDVNQMPEYVPLAESSQSKRRKKDTPNPWTEEEH 118
Query: 133 KRFLMGLIKYGKGDWRNISRNYVISKTPTQVASHAQKYFIRQLSGGKDKRRPSIHDITTG 192
+ FL GL KYG+G S N+V +KTP QV+SHAQ Y+ RQ S K ++R SI DIT
Sbjct: 119 RLFLQGLKKYGEGASTLTSTNFVKTKTPRQVSSHAQ-YYKRQKSDNKKEKRRSIFDITLE 177
Query: 193 NLTNSVSSDNHKPSSFD 209
+ + S N P D
Sbjct: 178 STEGNPDSGNQNPPDDD 194
>TAIR|locus:2025182 [details] [associations]
symbol:RL6 "RAD-like 6" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0009507 "chloroplast" evidence=ISM]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] InterPro:IPR001005 InterPro:IPR009057
SMART:SM00717 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 GO:GO:0003682
SUPFAM:SSF46689 PROSITE:PS51293 EMBL:AC025814 HOGENOM:HOG000238103
EMBL:AY519525 EMBL:DQ395346 EMBL:BT026091 IPI:IPI00526625
IPI:IPI00775691 PIR:H96782 RefSeq:NP_001077825.1 RefSeq:NP_177661.1
UniGene:At.64902 ProteinModelPortal:Q1A173 SMR:Q1A173
EnsemblPlants:AT1G75250.2 GeneID:843862 KEGG:ath:AT1G75250
TAIR:At1g75250 eggNOG:NOG253755 InParanoid:Q9FRL6 OMA:PLPNYKT
ProtClustDB:CLSN2682492 ArrayExpress:Q1A173 Genevestigator:Q1A173
Uniprot:Q1A173
Length = 97
Score = 197 (74.4 bits), Expect = 9.8e-16, P = 9.8e-16
Identities = 42/97 (43%), Positives = 59/97 (60%)
Query: 18 LQESSRST--SWTKEENKRFESALAIYSESTPDRWIKVAAMIPGKTVLDVIKQYKELEED 75
+ +SRS+ WT +NK FE ALA+Y + TPDRW VA + GKTV +V + Y L ED
Sbjct: 1 MASNSRSSISPWTFSQNKMFERALAVYDKDTPDRWHNVAKAVGGKTVEEVKRHYDILVED 60
Query: 76 VSDIEAGRVPIPGYLSSSFTLELVSESDYDANRKRTL 112
+ +IE GRVP+P Y +F S +D+D + + L
Sbjct: 61 LINIETGRVPLPNY--KTFESNSRSINDFDTRKMKNL 95
>TAIR|locus:2115260 [details] [associations]
symbol:RL3 "RAD-like 3" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] InterPro:IPR001005 InterPro:IPR009057
Pfam:PF00249 SMART:SM00717 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 EMBL:AL161589 eggNOG:KOG0724 EMBL:Z99708
EMBL:BT010770 EMBL:BT011255 IPI:IPI00524086 IPI:IPI00944270
PIR:G85431 RefSeq:NP_195375.4 UniGene:At.47987
ProteinModelPortal:Q6NNN0 SMR:Q6NNN0 IntAct:Q6NNN0 PRIDE:Q6NNN0
GeneID:829809 KEGG:ath:AT4G36570 TAIR:At4g36570 PhylomeDB:Q6NNN0
Genevestigator:Q6NNN0 Uniprot:Q6NNN0
Length = 81
Score = 190 (71.9 bits), Expect = 5.4e-15, P = 5.4e-15
Identities = 37/71 (52%), Positives = 48/71 (67%)
Query: 22 SRSTSWTKEENKRFESALAIYSESTPDRWIKVAAMIPGKTVLDVIKQYKELEEDVSDIEA 81
S S SWT++ENK FE ALA Y + TPDRW VA + GK+ +V + Y+ L DV+DIE+
Sbjct: 7 SSSASWTRKENKLFERALATYDQDTPDRWHNVARAVGGKSAEEVRRHYELLIRDVNDIES 66
Query: 82 GRVPIPGYLSS 92
GR P P Y S+
Sbjct: 67 GRYPHPNYRSN 77
>TAIR|locus:2136283 [details] [associations]
symbol:RL1 "RAD-like 1" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
GO:GO:0005634 EMBL:CP002687 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017884 PROSITE:PS51293 EMBL:AL161594 EMBL:AL050351
EMBL:AY519527 EMBL:BT024650 EMBL:DQ375231 IPI:IPI00518965
PIR:T08573 RefSeq:NP_195636.2 UniGene:At.64218
ProteinModelPortal:F4JVB8 SMR:F4JVB8 EnsemblPlants:AT4G39250.1
GeneID:830081 KEGG:ath:AT4G39250 TAIR:At4g39250 eggNOG:NOG329125
HOGENOM:HOG000238103 InParanoid:Q0NZY1 OMA:RHYEILV Uniprot:F4JVB8
Length = 100
Score = 181 (68.8 bits), Expect = 5.8e-14, P = 5.8e-14
Identities = 34/72 (47%), Positives = 47/72 (65%)
Query: 21 SSRSTSWTKEENKRFESALAIYSESTPDRWIKVAAMIPGKTVLDVIKQYKELEEDVSDIE 80
S S SWT ++NK FE ALA Y + TP+RW VA ++ GKT +V + Y+ L +D++ IE
Sbjct: 8 SQSSGSWTAKQNKAFEQALATYDQDTPNRWQNVAKVVGGKTTEEVKRHYELLVQDINSIE 67
Query: 81 AGRVPIPGYLSS 92
G VP P Y +S
Sbjct: 68 NGHVPFPNYRTS 79
>UNIPROTKB|Q58FS3 [details] [associations]
symbol:RAD "Transcription factor RADIALIS" species:4151
"Antirrhinum majus" [GO:0009908 "flower development" evidence=IMP]
[GO:0048262 "determination of dorsal/ventral asymmetry"
evidence=IMP] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
SMART:SM00717 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0009908 GO:GO:0048262
EMBL:AY954971 PDB:2CJJ PDBsum:2CJJ ProteinModelPortal:Q58FS3
SMR:Q58FS3 EvolutionaryTrace:Q58FS3 Uniprot:Q58FS3
Length = 93
Score = 178 (67.7 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 32/63 (50%), Positives = 43/63 (68%)
Query: 27 WTKEENKRFESALAIYSESTPDRWIKVAAMIPGKTVLDVIKQYKELEEDVSDIEAGRVPI 86
W+ +ENK FE ALA+Y + TPDRW VA + G+T +V K Y+ L ED+ IE+G+VP
Sbjct: 11 WSAKENKAFERALAVYDKDTPDRWANVARAVEGRTPEEVKKHYEILVEDIKYIESGKVPF 70
Query: 87 PGY 89
P Y
Sbjct: 71 PNY 73
>TAIR|locus:4010713631 [details] [associations]
symbol:RL4 "RAD-like 4" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] InterPro:IPR001005 InterPro:IPR009057
Pfam:PF00249 SMART:SM00717 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 EMBL:AC006439 EMBL:DQ487660 EMBL:DQ652756
EMBL:DQ395345 IPI:IPI00846254 RefSeq:NP_001077912.1
UniGene:At.49279 ProteinModelPortal:Q1G3C4 SMR:Q1G3C4 PRIDE:Q1G3C4
EnsemblPlants:AT2G18328.1 GeneID:5007884 KEGG:ath:AT2G18328
TAIR:At2g18328 eggNOG:NOG285168 OMA:EEDVGHI PhylomeDB:Q1G3C4
ProtClustDB:CLSN2920147 Genevestigator:Q1G3C4 Uniprot:Q1G3C4
Length = 77
Score = 178 (67.7 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 36/77 (46%), Positives = 52/77 (67%)
Query: 18 LQESSRSTS-WTKEENKRFESALAIYSESTPDRWIKVAAMIPGKTVLDVIKQYKELEEDV 76
+ SS STS WT E+K+FE ALA + + TPDRW K+A + GK+ +V + Y+ L DV
Sbjct: 1 MASSSMSTSSWTAREDKQFEMALAKFDKDTPDRWQKIARAVGGKSTEEVKRHYELLLRDV 60
Query: 77 SDIEAGRVPIPGYLSSS 93
+DIE+GR P P Y +++
Sbjct: 61 NDIESGRYPQPRYRNTN 77
>TAIR|locus:2049374 [details] [associations]
symbol:MEE3 "MATERNAL EFFECT EMBRYO ARREST 3"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0009793 "embryo development ending
in seed dormancy" evidence=IMP] [GO:0009630 "gravitropism"
evidence=IMP] [GO:0010114 "response to red light" evidence=IMP]
InterPro:IPR001005 InterPro:IPR009057 SMART:SM00717 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0003682 GO:GO:0010114 GO:GO:0009630
GO:GO:0009793 SUPFAM:SSF46689 PROSITE:PS51293 InterPro:IPR017877
EMBL:AC007119 HOGENOM:HOG000238103 EMBL:AY519526 EMBL:BT008554
EMBL:BT008698 EMBL:AK229516 IPI:IPI00543218 PIR:G84603
RefSeq:NP_179759.1 UniGene:At.43298 ProteinModelPortal:Q9SIJ5
SMR:Q9SIJ5 IntAct:Q9SIJ5 PRIDE:Q9SIJ5 EnsemblPlants:AT2G21650.1
GeneID:816703 KEGG:ath:AT2G21650 TAIR:At2g21650 eggNOG:NOG308303
InParanoid:Q9SIJ5 OMA:KHIESGH PhylomeDB:Q9SIJ5
ProtClustDB:CLSN2683609 Genevestigator:Q9SIJ5 Uniprot:Q9SIJ5
Length = 101
Score = 174 (66.3 bits), Expect = 4.0e-13, P = 4.0e-13
Identities = 33/70 (47%), Positives = 44/70 (62%)
Query: 24 STSWTKEENKRFESALAIYSESTPDRWIKVAAMIPGKTVLDVIKQYKELEEDVSDIEAGR 83
S SWT ++NK FE ALA+Y + TPDRW VA + GKT + +QY L D+ IE G
Sbjct: 11 SGSWTVKQNKAFERALAVYDQDTPDRWHNVARAVGGKTPEEAKRQYDLLVRDIESIENGH 70
Query: 84 VPIPGYLSSS 93
VP P Y +++
Sbjct: 71 VPFPDYKTTT 80
>DICTYBASE|DDB_G0274463 [details] [associations]
symbol:mybJ "myb domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001005
InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
dictyBase:DDB_G0274463 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
GenomeReviews:CM000151_GR GO:GO:0006351 GO:GO:0003682
EMBL:AAFI02000012 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017930 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 RefSeq:XP_644160.1 ProteinModelPortal:Q869R9
EnsemblProtists:DDB0220506 GeneID:8619589 KEGG:ddi:DDB_G0274463
eggNOG:NOG264937 OMA:KGAWKEI Uniprot:Q869R9
Length = 734
Score = 191 (72.3 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 45/124 (36%), Positives = 78/124 (62%)
Query: 122 KKGVPWTEEEHKRFLMGLIKYGKGDWRNISRNYVISKTPTQVASHAQKYFIRQLSGGKDK 181
K+G WT+EEH RFL G+ +GKG W+ I++ +V ++TPTQ+ SHAQKY++RQ K+K
Sbjct: 376 KQG--WTKEEHIRFLNGIQIHGKGAWKEIAQ-FVGTRTPTQIQSHAQKYYLRQKQETKNK 432
Query: 182 RRPSIHDITTGNLTNSVSSDNHKPSSFDQSNVIPAQQKSLGTPKVGLEWTDSNNGEVMAS 241
R SIHD++ +L + ++++K ++ D++ ++K+ T K + + + E M +
Sbjct: 433 R--SIHDLSLQDLIDDNLNNSNK-NNVDKNKQDDKEKKTQKTKKTKSK-SSTKGDEEMIT 488
Query: 242 DSTQ 245
Q
Sbjct: 489 QQQQ 492
>TAIR|locus:2016417 [details] [associations]
symbol:RL5 "RAD-like 5" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] InterPro:IPR001005 InterPro:IPR009057
SMART:SM00717 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 GO:GO:0003682
SUPFAM:SSF46689 PROSITE:PS51293 InterPro:IPR017877 EMBL:AC025808
HOGENOM:HOG000238103 EMBL:AY519524 EMBL:DQ395347 EMBL:AK119034
EMBL:BT005657 IPI:IPI00517217 IPI:IPI00526097 RefSeq:NP_564087.2
UniGene:At.41742 ProteinModelPortal:Q8GW75 SMR:Q8GW75
EnsemblPlants:AT1G19510.1 GeneID:838537 KEGG:ath:AT1G19510
TAIR:At1g19510 eggNOG:NOG289750 InParanoid:Q8GW75 OMA:HFEQLVH
PhylomeDB:Q8GW75 Genevestigator:Q8GW75 Uniprot:Q8GW75
Length = 100
Score = 167 (63.8 bits), Expect = 2.6e-12, P = 2.6e-12
Identities = 32/68 (47%), Positives = 44/68 (64%)
Query: 22 SRSTSWTKEENKRFESALAIYSESTPDRWIKVAAMIPGKTVLDVIKQYKELEEDVSDIEA 81
S S+SWT ++NK FE ALA+Y + TPDRW VA + K+ +V + Y L ED+ +IE
Sbjct: 7 SSSSSWTSKQNKMFERALAVYDKDTPDRWQNVAKAVGSKSAEEVKRHYDILVEDLMNIEQ 66
Query: 82 GRVPIPGY 89
VP+P Y
Sbjct: 67 DLVPLPKY 74
>DICTYBASE|DDB_G0277927 [details] [associations]
symbol:mybH "SWIRM domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000555
InterPro:IPR001005 InterPro:IPR007526 InterPro:IPR009057
Pfam:PF00249 Pfam:PF01398 Pfam:PF04433 PROSITE:PS50934
SMART:SM00232 SMART:SM00717 dictyBase:DDB_G0277927 GO:GO:0005634
GO:GO:0006355 GenomeReviews:CM000152_GR GO:GO:0003677
EMBL:AAFI02000023 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017930 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 eggNOG:NOG329351 HSSP:Q5VVJ2 RefSeq:XP_642011.1
ProteinModelPortal:Q54Z40 MEROPS:M67.A12 EnsemblProtists:DDB0220617
GeneID:8621224 KEGG:ddi:DDB_G0277927 KO:K11865 OMA:PIQQSPI
Uniprot:Q54Z40
Length = 1217
Score = 142 (55.0 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 33/102 (32%), Positives = 57/102 (55%)
Query: 114 AKSSDHERKK-GVPWTEEEHKRFLMGLIKYGKGDWRNISRNYVISKTPTQVASHAQKYF- 171
A SS H PW+ EEH+ FL + KYG+G+W+ IS + S+ Q+ +HA+ YF
Sbjct: 218 AASSSHNLPSHNTPWSNEEHELFLKAIEKYGRGNWKLIS-TLIKSRNTLQIKNHARIYFD 276
Query: 172 -IRQLSGGKDKRRPSIHDITTGNLTNSVSSDNHKPSSFDQSN 212
I Q +G K+ +I ++ N N +++N + ++ + +N
Sbjct: 277 KISQQNGPPSKK--TIIEVENNNNYNDQNNNNEQNNNNNNNN 316
Score = 65 (27.9 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 17/55 (30%), Positives = 28/55 (50%)
Query: 11 SNSSNWFLQESSRSTSWTKEENKRFESALAIYSESTPDRWIKVAAMIPGKTVLDV 65
+N+ + ++RS SWTKEE + F A +Y + K+ + KT+L V
Sbjct: 138 NNTPKTTISGATRS-SWTKEEERLFVEAYKLYDKDNK----KIQEHVKTKTILQV 187
>TAIR|locus:2171494 [details] [associations]
symbol:AT5G47290 "AT5G47290" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
EMBL:CP002688 GenomeReviews:BA000015_GR EMBL:AB018117
IPI:IPI00548425 RefSeq:NP_199540.1 UniGene:At.65655
ProteinModelPortal:Q9LVT0 SMR:Q9LVT0 EnsemblPlants:AT5G47290.1
GeneID:834776 KEGG:ath:AT5G47290 TAIR:At5g47290 PhylomeDB:Q9LVT0
ProtClustDB:CLSN2686360 Genevestigator:Q9LVT0 Uniprot:Q9LVT0
Length = 96
Score = 103 (41.3 bits), Expect = 5.0e-08, Sum P(2) = 5.0e-08
Identities = 29/70 (41%), Positives = 41/70 (58%)
Query: 27 WTKEENKRFESALAIYSESTPDRWIKVAAMIPGKTVLDVIK-QYKELEEDVSDIEAGRVP 85
WT EENK FE AL +S P + +AA + +T +D IK Y +L +D++ IE+GR
Sbjct: 7 WTWEENKAFEVALVQVPDS-PAKLEIIAAQM--RTSVDEIKYHYDKLLQDIAVIESGRDV 63
Query: 86 IPGYLSSSFT 95
+P Y S T
Sbjct: 64 VPEYSPRSAT 73
Score = 45 (20.9 bits), Expect = 5.0e-08, Sum P(2) = 5.0e-08
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 122 KKGVPWTEEEHKRFLMGLI 140
KKG W+ +EH+ + LI
Sbjct: 78 KKGTRWSAQEHESYDESLI 96
>DICTYBASE|DDB_G0289151 [details] [associations]
symbol:mybI "myb domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001005
InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
dictyBase:DDB_G0289151 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 GO:GO:0003682 GenomeReviews:CM000154_GR
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017930
PROSITE:PS51294 EMBL:AAFI02000130 RefSeq:XP_636387.1
ProteinModelPortal:Q54HX6 EnsemblProtists:DDB0233332 GeneID:8626988
KEGG:ddi:DDB_G0289151 eggNOG:NOG265212 OMA:CKLIKEN Uniprot:Q54HX6
Length = 977
Score = 154 (59.3 bits), Expect = 6.3e-08, P = 6.3e-08
Identities = 43/139 (30%), Positives = 71/139 (51%)
Query: 115 KSSDHERKKGVPWTEEEHKRFLMGLIKYGKGDWRNISRNYVISKTPTQVASHAQKYFIRQ 174
K S+ ++K+ WT EEH RF+ L KYG D ++IS+ YV ++ PTQV +HAQKYF+R
Sbjct: 164 KQSE-KKKQSRYWTPEEHSRFIEALSKYGHKDVKSISQ-YVSTRNPTQVRTHAQKYFLR- 220
Query: 175 LSGGKDKRRPSIHDITTG-----NLTNSVSSDNHKPSSFDQSNVIPAQQKSLGTP-KVGL 228
+ + ++ S I G + +D P+ + + P S+ P L
Sbjct: 221 IDRERGRKLESKESINGGADKDDDWLREEYNDEGSPTQYSSCSNSPTTN-SVANPFSNSL 279
Query: 229 EWTDSNNGEVMASDSTQSN 247
+ +NN +S++ +N
Sbjct: 280 IISSNNNNNSNSSNNNNNN 298
>UNIPROTKB|I3LNQ0 [details] [associations]
symbol:I3LNQ0 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
InterPro:IPR001623 InterPro:IPR018253 Pfam:PF00226 GO:GO:0005634
GO:GO:0003677 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017884 PROSITE:PS51293 Gene3D:1.10.287.110
SMART:SM00271 SUPFAM:SSF46565 PROSITE:PS00636 PROSITE:PS50076
GeneTree:ENSGT00530000063419 Ensembl:ENSSSCT00000023342
Uniprot:I3LNQ0
Length = 503
Score = 142 (55.0 bits), Expect = 5.7e-07, P = 5.7e-07
Identities = 28/59 (47%), Positives = 37/59 (62%)
Query: 25 TSWTKEENKRFESALAIYSESTPDRWIKVAAMIPGKTVLDVIKQYKELEEDVSDIEAGR 83
T WT EE K E AL Y +TP+RW K+A +PG+T D +K+YKEL E V +A +
Sbjct: 434 TPWTTEEQKLLEQALKTYPVNTPERWEKIAEAVPGRTKKDCMKRYKELVEMVKAKKAAQ 492
>UNIPROTKB|I3LSN5 [details] [associations]
symbol:I3LSN5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
InterPro:IPR001623 InterPro:IPR018253 Pfam:PF00226 GO:GO:0005634
GO:GO:0003677 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017884 PROSITE:PS51293 Gene3D:1.10.287.110
SMART:SM00271 SUPFAM:SSF46565 PROSITE:PS00636 PROSITE:PS50076
GeneTree:ENSGT00530000063419 Ensembl:ENSSSCT00000028055 OMA:HEDSTRD
Uniprot:I3LSN5
Length = 508
Score = 142 (55.0 bits), Expect = 5.8e-07, P = 5.8e-07
Identities = 28/59 (47%), Positives = 37/59 (62%)
Query: 25 TSWTKEENKRFESALAIYSESTPDRWIKVAAMIPGKTVLDVIKQYKELEEDVSDIEAGR 83
T WT EE K E AL Y +TP+RW K+A +PG+T D +K+YKEL E V +A +
Sbjct: 439 TPWTTEEQKLLEQALKTYPVNTPERWEKIAEAVPGRTKKDCMKRYKELVEMVKAKKAAQ 497
>UNIPROTKB|F1P3V8 [details] [associations]
symbol:DNAJC2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0000085
"G2 phase of mitotic cell cycle" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0030544 "Hsp70 protein binding" evidence=IEA] [GO:0031965
"nuclear membrane" evidence=IEA] [GO:0042393 "histone binding"
evidence=IEA] [GO:0043130 "ubiquitin binding" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
SMART:SM00717 InterPro:IPR001623 InterPro:IPR018253 Pfam:PF00226
GO:GO:0005829 GO:GO:0045893 GO:GO:0003677 GO:GO:0006260
GO:GO:0031965 GO:GO:0000085 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293
Gene3D:1.10.287.110 SMART:SM00271 SUPFAM:SSF46565 PROSITE:PS00636
PROSITE:PS50076 InterPro:IPR017877 PROSITE:PS50090
GeneTree:ENSGT00530000063419 OMA:RWFEAFI EMBL:AADN02036895
IPI:IPI00571328 Ensembl:ENSGALT00000013428 Uniprot:F1P3V8
Length = 621
Score = 143 (55.4 bits), Expect = 6.1e-07, P = 6.1e-07
Identities = 28/60 (46%), Positives = 39/60 (65%)
Query: 24 STSWTKEENKRFESALAIYSESTPDRWIKVAAMIPGKTVLDVIKQYKELEEDVSDIEAGR 83
S+ WT EE K E AL Y +TP+RW K+AA +PG++ D +K+YKEL E V +A +
Sbjct: 551 SSPWTTEEQKLLEQALKTYPVNTPERWEKIAAAVPGRSKKDCMKRYKELVEMVKAKKAAQ 610
>MGI|MGI:99470 [details] [associations]
symbol:Dnajc2 "DnaJ (Hsp40) homolog, subfamily C, member 2"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005829
"cytosol" evidence=ISO] [GO:0006260 "DNA replication" evidence=IMP]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=ISO]
[GO:0030544 "Hsp70 protein binding" evidence=ISO] [GO:0042393
"histone binding" evidence=ISO] [GO:0043130 "ubiquitin binding"
evidence=ISO] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISO] [GO:2000279 "negative regulation of
DNA biosynthetic process" evidence=IMP] InterPro:IPR001005
InterPro:IPR009057 Pfam:PF00249 SMART:SM00717 InterPro:IPR001623
InterPro:IPR018253 Pfam:PF00226 MGI:MGI:99470 GO:GO:0005829
GO:GO:0005634 GO:GO:0045893 GO:GO:0030308 GO:GO:0003677
GO:GO:0006260 GO:GO:0031965 GO:GO:0000085 GO:GO:0006351
GO:GO:0003682 GO:GO:0016568 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0042393
Gene3D:1.10.287.110 SMART:SM00271 SUPFAM:SSF46565 PROSITE:PS00636
PROSITE:PS50076 InterPro:IPR017930 GO:GO:0043130
GeneTree:ENSGT00530000063419 CTD:27000 eggNOG:COG5269
HOGENOM:HOG000006900 HOVERGEN:HBG008782 KO:K09522 OMA:RWFEAFI
OrthoDB:EOG4D26PN EMBL:D63784 EMBL:AK131964 EMBL:BC052027
EMBL:U53208 IPI:IPI00126317 PIR:A57591 RefSeq:NP_033610.1
UniGene:Mm.266312 ProteinModelPortal:P54103 SMR:P54103
STRING:P54103 PhosphoSite:P54103 PaxDb:P54103 PRIDE:P54103
Ensembl:ENSMUST00000030771 GeneID:22791 KEGG:mmu:22791
UCSC:uc008woy.1 InParanoid:P54103 NextBio:303379 Bgee:P54103
CleanEx:MM_DNAJC2 Genevestigator:P54103
GermOnline:ENSMUSG00000029014 Uniprot:P54103
Length = 621
Score = 143 (55.4 bits), Expect = 6.1e-07, P = 6.1e-07
Identities = 28/60 (46%), Positives = 38/60 (63%)
Query: 24 STSWTKEENKRFESALAIYSESTPDRWIKVAAMIPGKTVLDVIKQYKELEEDVSDIEAGR 83
ST WT EE K E AL Y +TP+RW K+A +PG+T D +++YKEL E V +A +
Sbjct: 551 STPWTTEEQKLLEQALKTYPVNTPERWEKIAEAVPGRTKKDCMRRYKELVEMVKAKKAAQ 610
>UNIPROTKB|Q1RMH9 [details] [associations]
symbol:DNAJC2 "DnaJ homolog subfamily C member 2"
species:9913 "Bos taurus" [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0003682 "chromatin
binding" evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0043130 "ubiquitin binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005829 "cytosol" evidence=ISS] [GO:0031965
"nuclear membrane" evidence=IEA] [GO:0030544 "Hsp70 protein
binding" evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0000085 "G2 phase of mitotic cell cycle" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR001005 InterPro:IPR009057
Pfam:PF00249 SMART:SM00717 InterPro:IPR001623 InterPro:IPR018253
Pfam:PF00226 GO:GO:0005829 GO:GO:0005634 GO:GO:0045893
GO:GO:0003677 GO:GO:0006260 GO:GO:0031965 GO:GO:0000085
GO:GO:0006351 GO:GO:0003682 GO:GO:0016568 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293 GO:GO:0042393
Gene3D:1.10.287.110 SMART:SM00271 SUPFAM:SSF46565 PROSITE:PS00636
PROSITE:PS50076 GO:GO:0043130 InterPro:IPR017877
GeneTree:ENSGT00530000063419 EMBL:BC114887 IPI:IPI00703453
RefSeq:NP_001068805.1 UniGene:Bt.61294 ProteinModelPortal:Q1RMH9
STRING:Q1RMH9 PRIDE:Q1RMH9 Ensembl:ENSBTAT00000004925 GeneID:507897
KEGG:bta:507897 CTD:27000 eggNOG:COG5269 HOGENOM:HOG000006900
HOVERGEN:HBG008782 InParanoid:Q1RMH9 KO:K09522 OMA:RWFEAFI
OrthoDB:EOG4D26PN NextBio:20868264 Uniprot:Q1RMH9
Length = 621
Score = 142 (55.0 bits), Expect = 7.9e-07, P = 7.9e-07
Identities = 28/59 (47%), Positives = 37/59 (62%)
Query: 25 TSWTKEENKRFESALAIYSESTPDRWIKVAAMIPGKTVLDVIKQYKELEEDVSDIEAGR 83
T WT EE K E AL Y +TP+RW K+A +PG+T D +K+YKEL E V +A +
Sbjct: 552 TPWTTEEQKLLEQALKTYPVNTPERWEKIAEAVPGRTKKDCMKRYKELVEMVKAKKAAQ 610
>UNIPROTKB|Q99543 [details] [associations]
symbol:DNAJC2 "DnaJ homolog subfamily C member 2"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0000085 "G2
phase of mitotic cell cycle" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0030308 "negative regulation of cell
growth" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043130 "ubiquitin binding"
evidence=IDA] [GO:0042393 "histone binding" evidence=IDA]
[GO:0003682 "chromatin binding" evidence=IDA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0030544 "Hsp70 protein binding" evidence=IPI] [GO:0051083 "'de
novo' cotranslational protein folding" evidence=TAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0031965 "nuclear membrane"
evidence=IDA] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
SMART:SM00717 InterPro:IPR001623 InterPro:IPR018253 Pfam:PF00226
GO:GO:0005829 GO:GO:0045893 GO:GO:0030308 GO:GO:0003677
GO:GO:0006260 GO:GO:0031965 GO:GO:0000085 GO:GO:0006351
GO:GO:0003682 GO:GO:0016568 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0042393
Gene3D:1.10.287.110 SMART:SM00271 SUPFAM:SSF46565 PROSITE:PS00636
PROSITE:PS50076 GO:GO:0043130 CTD:27000 eggNOG:COG5269
HOGENOM:HOG000006900 HOVERGEN:HBG008782 KO:K09522 OMA:RWFEAFI
EMBL:X98260 EMBL:AC004668 EMBL:BC000859 EMBL:BC139751
IPI:IPI00455199 IPI:IPI00830108 RefSeq:NP_001123359.1
RefSeq:NP_055192.1 UniGene:Hs.558476 ProteinModelPortal:Q99543
SMR:Q99543 STRING:Q99543 PhosphoSite:Q99543 DMDM:296439472
PaxDb:Q99543 PRIDE:Q99543 DNASU:27000 Ensembl:ENST00000249270
Ensembl:ENST00000379263 GeneID:27000 KEGG:hsa:27000 UCSC:uc003vbo.3
UCSC:uc010lix.3 GeneCards:GC07M102952 HGNC:HGNC:13192 HPA:HPA020454
MIM:605502 neXtProt:NX_Q99543 PharmGKB:PA162383835
InParanoid:Q99543 GenomeRNAi:27000 NextBio:49486
ArrayExpress:Q99543 Bgee:Q99543 CleanEx:HS_DNAJC2
Genevestigator:Q99543 GermOnline:ENSG00000105821 GO:GO:0051083
Uniprot:Q99543
Length = 621
Score = 142 (55.0 bits), Expect = 7.9e-07, P = 7.9e-07
Identities = 28/59 (47%), Positives = 37/59 (62%)
Query: 25 TSWTKEENKRFESALAIYSESTPDRWIKVAAMIPGKTVLDVIKQYKELEEDVSDIEAGR 83
T WT EE K E AL Y +TP+RW K+A +PG+T D +K+YKEL E V +A +
Sbjct: 552 TPWTTEEQKLLEQALKTYPVNTPERWEKIAEAVPGRTKKDCMKRYKELVEMVKAKKAAQ 610
>UNIPROTKB|F1SB54 [details] [associations]
symbol:DNAJC2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0031965 "nuclear membrane" evidence=IEA] [GO:0030544 "Hsp70
protein binding" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR001005 InterPro:IPR009057
Pfam:PF00249 SMART:SM00717 InterPro:IPR001623 InterPro:IPR018253
Pfam:PF00226 GO:GO:0005829 GO:GO:0045893 GO:GO:0003677
GO:GO:0031965 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017884 PROSITE:PS51293 Gene3D:1.10.287.110
SMART:SM00271 SUPFAM:SSF46565 PROSITE:PS00636 PROSITE:PS50076
InterPro:IPR017877 PROSITE:PS50090 GeneTree:ENSGT00530000063419
KO:K09522 EMBL:CU570825 RefSeq:XP_003130290.1
Ensembl:ENSSSCT00000016801 GeneID:100514533 KEGG:ssc:100514533
OMA:FQSWRDF Uniprot:F1SB54
Length = 621
Score = 142 (55.0 bits), Expect = 7.9e-07, P = 7.9e-07
Identities = 28/59 (47%), Positives = 37/59 (62%)
Query: 25 TSWTKEENKRFESALAIYSESTPDRWIKVAAMIPGKTVLDVIKQYKELEEDVSDIEAGR 83
T WT EE K E AL Y +TP+RW K+A +PG+T D +K+YKEL E V +A +
Sbjct: 552 TPWTTEEQKLLEQALKTYPVNTPERWEKIAEAVPGRTKKDCMKRYKELVEMVKAKKAAQ 610
>UNIPROTKB|Q4R8H2 [details] [associations]
symbol:DNAJC2 "DnaJ homolog subfamily C member 2"
species:9541 "Macaca fascicularis" [GO:0003682 "chromatin binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005829
"cytosol" evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0043130 "ubiquitin binding" evidence=ISS] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
InterPro:IPR001623 InterPro:IPR018253 Pfam:PF00226 GO:GO:0005829
GO:GO:0005634 GO:GO:0045893 GO:GO:0003677 GO:GO:0006351
GO:GO:0003682 GO:GO:0016568 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0042393
Gene3D:1.10.287.110 SMART:SM00271 SUPFAM:SSF46565 PROSITE:PS00636
PROSITE:PS50076 GO:GO:0043130 HOVERGEN:HBG008782 OrthoDB:EOG4D26PN
EMBL:AB168480 HSSP:Q96KC8 ProteinModelPortal:Q4R8H2 PRIDE:Q4R8H2
Uniprot:Q4R8H2
Length = 621
Score = 142 (55.0 bits), Expect = 7.9e-07, P = 7.9e-07
Identities = 28/59 (47%), Positives = 37/59 (62%)
Query: 25 TSWTKEENKRFESALAIYSESTPDRWIKVAAMIPGKTVLDVIKQYKELEEDVSDIEAGR 83
T WT EE K E AL Y +TP+RW K+A +PG+T D +K+YKEL E V +A +
Sbjct: 552 TPWTTEEQKLLEQALKTYPVNTPERWEKIAEAVPGRTKKDCMKRYKELVEMVKAKKAAQ 610
>UNIPROTKB|E2RS54 [details] [associations]
symbol:DNAJC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
SMART:SM00717 InterPro:IPR001623 InterPro:IPR018253 Pfam:PF00226
GO:GO:0005634 GO:GO:0003677 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293
Gene3D:1.10.287.110 SMART:SM00271 SUPFAM:SSF46565 PROSITE:PS00636
PROSITE:PS50076 GeneTree:ENSGT00530000063419 OMA:RWFEAFI
EMBL:AAEX03011249 Ensembl:ENSCAFT00000006800 Uniprot:E2RS54
Length = 627
Score = 142 (55.0 bits), Expect = 8.0e-07, P = 8.0e-07
Identities = 28/59 (47%), Positives = 37/59 (62%)
Query: 25 TSWTKEENKRFESALAIYSESTPDRWIKVAAMIPGKTVLDVIKQYKELEEDVSDIEAGR 83
T WT EE K E AL Y +TP+RW K+A +PG+T D +K+YKEL E V +A +
Sbjct: 558 TPWTTEEQKLLEQALKTYPVNTPERWEKIAEAVPGRTKKDCMKRYKELVEMVKAKKAAQ 616
>RGD|620524 [details] [associations]
symbol:Dnajc2 "DnaJ (Hsp40) homolog, subfamily C, member 2"
species:10116 "Rattus norvegicus" [GO:0000085 "G2 phase of mitotic
cell cycle" evidence=IEA;ISO] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=ISO;ISS]
[GO:0005634 "nucleus" evidence=ISO;ISS] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005829 "cytosol" evidence=ISO;ISS] [GO:0006260
"DNA replication" evidence=IEA;ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0030308 "negative regulation of cell growth"
evidence=IDA] [GO:0030544 "Hsp70 protein binding" evidence=IEA;ISO]
[GO:0031965 "nuclear membrane" evidence=IEA;ISO] [GO:0042393
"histone binding" evidence=ISO;ISS] [GO:0043130 "ubiquitin binding"
evidence=ISO;ISS] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO;ISS] InterPro:IPR001005
InterPro:IPR009057 Pfam:PF00249 SMART:SM00717 InterPro:IPR001623
InterPro:IPR018253 Pfam:PF00226 RGD:620524 GO:GO:0005829
GO:GO:0005634 GO:GO:0045893 GO:GO:0030308 GO:GO:0003677
GO:GO:0006260 GO:GO:0031965 GO:GO:0000085 GO:GO:0006351
GO:GO:0003682 GO:GO:0016568 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0042393
Gene3D:1.10.287.110 SMART:SM00271 SUPFAM:SSF46565 PROSITE:PS00636
PROSITE:PS50076 InterPro:IPR017930 GO:GO:0043130
GeneTree:ENSGT00530000063419 CTD:27000 eggNOG:COG5269
HOGENOM:HOG000006900 HOVERGEN:HBG008782 KO:K09522 OrthoDB:EOG4D26PN
HSSP:Q96KC8 EMBL:AY322161 EMBL:AY322163 EMBL:BC088838 EMBL:AF118853
IPI:IPI00358140 IPI:IPI00991289 RefSeq:NP_446228.2 UniGene:Rn.11908
ProteinModelPortal:Q7TQ20 STRING:Q7TQ20 PhosphoSite:Q7TQ20
PRIDE:Q7TQ20 Ensembl:ENSRNOT00000016909 GeneID:116456
KEGG:rno:116456 InParanoid:Q7TQ18 NextBio:618962
Genevestigator:Q7TQ20 Uniprot:Q7TQ20
Length = 621
Score = 137 (53.3 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 27/60 (45%), Positives = 37/60 (61%)
Query: 24 STSWTKEENKRFESALAIYSESTPDRWIKVAAMIPGKTVLDVIKQYKELEEDVSDIEAGR 83
S WT EE K E AL Y +TP+RW K+A +PG+T D +++YKEL E V +A +
Sbjct: 551 SIPWTTEEQKLLEQALKTYPVNTPERWEKIAEAVPGRTKKDCMRRYKELVEMVKAKKAAQ 610
>UNIPROTKB|Q6P2Y3 [details] [associations]
symbol:dnajc2 "DnaJ homolog subfamily C member 2"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0003682 "chromatin
binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005829 "cytosol" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0043130 "ubiquitin binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
SMART:SM00717 InterPro:IPR001623 InterPro:IPR018253 Pfam:PF00226
GO:GO:0005829 GO:GO:0005634 GO:GO:0045893 GO:GO:0003677
GO:GO:0006351 GO:GO:0003682 GO:GO:0016568 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293 GO:GO:0042393
Gene3D:1.10.287.110 SMART:SM00271 SUPFAM:SSF46565 PROSITE:PS00636
PROSITE:PS50076 GO:GO:0043130 GeneTree:ENSGT00530000063419
CTD:27000 eggNOG:COG5269 HOGENOM:HOG000006900 HOVERGEN:HBG008782
KO:K09522 OrthoDB:EOG4D26PN EMBL:BC064251 RefSeq:NP_001186412.1
UniGene:Str.15500 ProteinModelPortal:Q6P2Y3 STRING:Q6P2Y3
Ensembl:ENSXETT00000049978 GeneID:394933 KEGG:xtr:394933
Xenbase:XB-GENE-964533 InParanoid:Q6P2Y3 Bgee:Q6P2Y3 Uniprot:Q6P2Y3
Length = 620
Score = 134 (52.2 bits), Expect = 6.4e-06, P = 6.4e-06
Identities = 26/57 (45%), Positives = 36/57 (63%)
Query: 27 WTKEENKRFESALAIYSESTPDRWIKVAAMIPGKTVLDVIKQYKELEEDVSDIEAGR 83
WT EE K E AL Y +TP+RW K+A +PG++ D +K+YKEL E V +A +
Sbjct: 553 WTTEEQKLLEQALKTYPVNTPERWEKIAEAVPGRSKKDCMKRYKELVEMVKAKKAAQ 609
>TAIR|locus:2169135 [details] [associations]
symbol:RVE2 "REVEILLE 2" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=RCA;TAS]
[GO:0009651 "response to salt stress" evidence=IEP;RCA] [GO:0009723
"response to ethylene stimulus" evidence=IEP;RCA] [GO:0009733
"response to auxin stimulus" evidence=IEP;RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=IEP;RCA] [GO:0009739
"response to gibberellin stimulus" evidence=IEP;RCA] [GO:0009751
"response to salicylic acid stimulus" evidence=IEP;RCA] [GO:0009753
"response to jasmonic acid stimulus" evidence=IEP;RCA] [GO:0007623
"circadian rhythm" evidence=IEP;RCA] [GO:0009845 "seed germination"
evidence=IMP] [GO:0009909 "regulation of flower development"
evidence=IMP] [GO:0048574 "long-day photoperiodism, flowering"
evidence=RCA] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
SMART:SM00717 GO:GO:0009737 EMBL:CP002688 GO:GO:0009733
GO:GO:0009753 GO:GO:0009723 GO:GO:0003677 GO:GO:0007623
GO:GO:0009651 GO:GO:0003700 GO:GO:0003682 GO:GO:0009751
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009739 GO:GO:0009845
GO:GO:0009909 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 IPI:IPI00528444
RefSeq:NP_198542.1 UniGene:At.30502 UniGene:At.68589
ProteinModelPortal:F4K5X6 SMR:F4K5X6 PRIDE:F4K5X6
EnsemblPlants:AT5G37260.1 GeneID:833700 KEGG:ath:AT5G37260
OMA:SSHTEES ArrayExpress:F4K5X6 Uniprot:F4K5X6
Length = 287
Score = 127 (49.8 bits), Expect = 9.9e-06, P = 9.9e-06
Identities = 33/79 (41%), Positives = 46/79 (58%)
Query: 97 ELVSESD--YDANRKRTLVAKSSDHERKKGVPWTEEEHKRFLMGLIKYGKGDWRNISRNY 154
EL+S SD Y RK + K +R+K WTE EH++F+ L YG+ WR I +
Sbjct: 14 ELISSSDAFYLKTRKPYTITK----QREK---WTEAEHEKFVEALKLYGRA-WRRIEE-H 64
Query: 155 VISKTPTQVASHAQKYFIR 173
V +KT Q+ SHAQK+F +
Sbjct: 65 VGTKTAVQIRSHAQKFFTK 83
>TAIR|locus:2014114 [details] [associations]
symbol:EPR1 "EARLY-PHYTOCHROME-RESPONSIVE1" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0009651 "response to salt stress" evidence=IEP]
[GO:0009723 "response to ethylene stimulus" evidence=IEP]
[GO:0046686 "response to cadmium ion" evidence=IEP] [GO:0007623
"circadian rhythm" evidence=IEP] InterPro:IPR001005
InterPro:IPR009057 Pfam:PF00249 SMART:SM00717 EMBL:CP002684
GO:GO:0046686 GO:GO:0009723 GO:GO:0003677 GO:GO:0007623
GO:GO:0009651 GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 EMBL:AC013354 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 IPI:IPI00891668
RefSeq:NP_001117304.1 UniGene:At.27131 ProteinModelPortal:B3H5A8
SMR:B3H5A8 EnsemblPlants:AT1G18330.2 GeneID:838413
KEGG:ath:AT1G18330 TAIR:At1g18330 eggNOG:NOG263004
HOGENOM:HOG000064617 OMA:NSCTSDI PhylomeDB:B3H5A8
ProtClustDB:CLSN2682175 Genevestigator:B3H5A8 Uniprot:B3H5A8
Length = 372
Score = 125 (49.1 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 26/68 (38%), Positives = 39/68 (57%)
Query: 122 KKGVPWTEEEHKRFLMGLIKYGKGDWRNISRNYVISKTPTQVASHAQKYFIRQLSGGKDK 181
K+ W+EEEH RFL + YG+G WR I + ++ +KT Q+ SHAQK+F + +
Sbjct: 74 KQREKWSEEEHDRFLEAIKLYGRG-WRQI-QEHIGTKTAVQIRSHAQKFFSKMAQEADSR 131
Query: 182 RRPSIHDI 189
S+ I
Sbjct: 132 SEGSVKAI 139
Score = 42 (19.8 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 6/16 (37%), Positives = 13/16 (81%)
Query: 198 VSSDNHKPSSFDQSNV 213
V+ ++HKPSS++ ++
Sbjct: 250 VAEESHKPSSYNDDDL 265
>TAIR|locus:2025411 [details] [associations]
symbol:ASG4 "ALTERED SEED GERMINATION 4" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0009651 "response to salt stress" evidence=IEP]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 EMBL:Y12776
EMBL:AC061957 GO:GO:0003677 GO:GO:0009651 GO:GO:0003700
GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017930 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 EMBL:AY519508 EMBL:AJ937211 EMBL:BT029347
IPI:IPI00536561 RefSeq:NP_171659.1 UniGene:At.49839
ProteinModelPortal:Q6R0H0 SMR:Q6R0H0 IntAct:Q6R0H0
EnsemblPlants:AT1G01520.1 GeneID:839337 KEGG:ath:AT1G01520
TAIR:At1g01520 eggNOG:KOG0724 HOGENOM:HOG000237512
InParanoid:Q6R0H0 OMA:SHIMEQG PhylomeDB:Q6R0H0
ProtClustDB:CLSN2682863 Genevestigator:Q6R0H0 Uniprot:Q6R0H0
Length = 287
Score = 126 (49.4 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 35/100 (35%), Positives = 54/100 (54%)
Query: 86 IPGYLSSSFTLELVSESDYDANRKRTLVAKSSDHERKKGVPWTEEEHKRFLMGLIKYGKG 145
IP + S+ T+ + RK + KS ++ WTE+EH +FL L + +
Sbjct: 31 IPVSIRSNRTMSFFEDPTKKV-RKPYTITKSREN-------WTEQEHDKFLEALHLFDR- 81
Query: 146 DWRNISRNYVISKTPTQVASHAQKYFIR-QLSGGKDKRRP 184
DW+ I + +V SKT Q+ SHAQKYF++ Q +G K+ P
Sbjct: 82 DWKKI-KAFVGSKTVIQIRSHAQKYFLKVQKNGTKEHLPP 120
>DICTYBASE|DDB_G0288783 [details] [associations]
symbol:mybG "myb domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
SMART:SM00717 dictyBase:DDB_G0288783 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 GO:GO:0003682 GenomeReviews:CM000154_GR
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294
EMBL:AAFI02000125 RefSeq:XP_636518.1 HSSP:Q5VVJ2
ProteinModelPortal:Q54IF9 PRIDE:Q54IF9 EnsemblProtists:DDB0220514
GeneID:8626803 KEGG:ddi:DDB_G0288783 eggNOG:NOG279643 OMA:NNTGERI
Uniprot:Q54IF9
Length = 423
Score = 128 (50.1 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 26/58 (44%), Positives = 37/58 (63%)
Query: 127 WTEEEHKRFLMGLIKYGKGDWRNISRNYVISKTPTQVASHAQKYFIRQLSGGKDKRRP 184
WT+EEH++FL L + + DW+ I ++V SKT Q+ SHAQKYFI+ +R P
Sbjct: 44 WTDEEHQKFLEALTLFDR-DWKKIE-SFVGSKTVIQIRSHAQKYFIKVQKNNTGERIP 99
>TAIR|locus:2124928 [details] [associations]
symbol:AT4G01280 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0009651 "response to salt stress" evidence=IEP;RCA] [GO:0009723
"response to ethylene stimulus" evidence=IEP;RCA] [GO:0009733
"response to auxin stimulus" evidence=IEP;RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=IEP;RCA] [GO:0009739
"response to gibberellin stimulus" evidence=IEP;RCA] [GO:0009751
"response to salicylic acid stimulus" evidence=IEP;RCA] [GO:0009753
"response to jasmonic acid stimulus" evidence=IEP;RCA] [GO:0046686
"response to cadmium ion" evidence=IEP;RCA] [GO:0000303 "response
to superoxide" evidence=RCA] [GO:0009736 "cytokinin mediated
signaling pathway" evidence=RCA] [GO:0009873 "ethylene mediated
signaling pathway" evidence=RCA] [GO:0048573 "photoperiodism,
flowering" evidence=RCA] InterPro:IPR001005 InterPro:IPR009057
Pfam:PF00249 SMART:SM00717 GO:GO:0009737 GO:GO:0046686
EMBL:CP002687 GO:GO:0009733 GO:GO:0009753 GO:GO:0009723
GO:GO:0003677 GO:GO:0009651 GO:GO:0003700 GO:GO:0003682
GO:GO:0009751 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009739
InterPro:IPR017930 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 HOGENOM:HOG000237512 ProtClustDB:CLSN2682863
EMBL:AB493668 IPI:IPI00656826 RefSeq:NP_001031568.1
UniGene:At.44234 ProteinModelPortal:C0SVG5 SMR:C0SVG5
EnsemblPlants:AT4G01280.2 GeneID:827903 KEGG:ath:AT4G01280
TAIR:At4g01280 eggNOG:NOG272389 OMA:KSGANEH PhylomeDB:C0SVG5
Genevestigator:C0SVG5 Uniprot:C0SVG5
Length = 303
Score = 125 (49.1 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 36/104 (34%), Positives = 53/104 (50%)
Query: 82 GRVPIPGYLSS-SFTLELVSESDYDANRKRTLVAKSSDHERKKGVPWTEEEHKRFLMGLI 140
G +P G S+ SF SE RK + KS ++ WT++EH +FL L
Sbjct: 28 GSIPATGRTSTVSF-----SEDPTTKIRKPYTIKKSREN-------WTDQEHDKFLEALH 75
Query: 141 KYGKGDWRNISRNYVISKTPTQVASHAQKYFIRQLSGGKDKRRP 184
+ + DW+ I +V SKT Q+ SHAQKYF++ G ++ P
Sbjct: 76 LFDR-DWKKIEA-FVGSKTVVQIRSHAQKYFLKVQKSGANEHLP 117
>TAIR|locus:504955668 [details] [associations]
symbol:AT3G10113 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
EMBL:CP002686 GO:GO:0006355 GO:GO:0003677 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294
UniGene:At.27131 IPI:IPI00534114 RefSeq:NP_683543.1
UniGene:At.53244 ProteinModelPortal:F4J2J6 SMR:F4J2J6
EnsemblPlants:AT3G10113.1 GeneID:820173 KEGG:ath:AT3G10113
PhylomeDB:F4J2J6 Uniprot:F4J2J6
Length = 336
Score = 125 (49.1 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 26/68 (38%), Positives = 39/68 (57%)
Query: 122 KKGVPWTEEEHKRFLMGLIKYGKGDWRNISRNYVISKTPTQVASHAQKYFIRQLSGGKDK 181
K+ W+EEEH RFL + YG+G WR I + ++ +KT Q+ SHAQK+F + +
Sbjct: 63 KQREKWSEEEHDRFLEAIKLYGRG-WRQI-QEHIGTKTAVQIRSHAQKFFSKMAQEADSR 120
Query: 182 RRPSIHDI 189
S+ I
Sbjct: 121 SEGSVKAI 128
>TAIR|locus:2167210 [details] [associations]
symbol:RVE1 "REVEILLE 1" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;IDA] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS;IMP] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=RCA;TAS]
[GO:0007623 "circadian rhythm" evidence=IEP;RCA] [GO:0009734 "auxin
mediated signaling pathway" evidence=IMP] [GO:0009851 "auxin
biosynthetic process" evidence=IMP] [GO:0010600 "regulation of
auxin biosynthetic process" evidence=IMP] [GO:0009651 "response to
salt stress" evidence=RCA] [GO:0009723 "response to ethylene
stimulus" evidence=RCA] [GO:0009733 "response to auxin stimulus"
evidence=RCA] [GO:0009737 "response to abscisic acid stimulus"
evidence=RCA] [GO:0009739 "response to gibberellin stimulus"
evidence=RCA] [GO:0009751 "response to salicylic acid stimulus"
evidence=RCA] [GO:0009753 "response to jasmonic acid stimulus"
evidence=RCA] [GO:0048574 "long-day photoperiodism, flowering"
evidence=RCA] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
SMART:SM00717 EMBL:CP002688 GO:GO:0009734 GO:GO:0003677
GO:GO:0007623 GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0009851 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 GO:GO:0010600 IPI:IPI00524365
RefSeq:NP_568344.2 UniGene:At.21718 ProteinModelPortal:F4KGY6
SMR:F4KGY6 EnsemblPlants:AT5G17300.1 GeneID:831595
KEGG:ath:AT5G17300 OMA:TKERERW Uniprot:F4KGY6
Length = 387
Score = 126 (49.4 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 27/55 (49%), Positives = 36/55 (65%)
Query: 127 WTEEEHKRFLMGLIKYGKGDWRNISRNYVISKTPTQVASHAQKYF---IRQLSGG 178
WT+EEHK+F+ L YG+ WR I +V SKT Q+ SHAQK+F R+ +GG
Sbjct: 58 WTDEEHKKFVEALKLYGRA-WRRIEE-HVGSKTAVQIRSHAQKFFSKVAREATGG 110
>ZFIN|ZDB-GENE-040426-1912 [details] [associations]
symbol:dnajc2 "DnaJ (Hsp40) homolog, subfamily C,
member 2" species:7955 "Danio rerio" [GO:0003682 "chromatin
binding" evidence=IEA;ISS] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005829 "cytosol" evidence=ISS] [GO:0005634 "nucleus"
evidence=IEA;ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0043130 "ubiquitin binding" evidence=ISS]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR001005
InterPro:IPR009057 Pfam:PF00249 SMART:SM00717 InterPro:IPR001623
Pfam:PF00226 ZFIN:ZDB-GENE-040426-1912 GO:GO:0005829 GO:GO:0005634
GO:GO:0045893 GO:GO:0003677 GO:GO:0006351 GO:GO:0003682
GO:GO:0016568 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0042393 Gene3D:1.10.287.110 SMART:SM00271
SUPFAM:SSF46565 PROSITE:PS50076 GO:GO:0043130
GeneTree:ENSGT00530000063419 CTD:27000 HOGENOM:HOG000006900
HOVERGEN:HBG008782 KO:K09522 EMBL:BC055125 EMBL:BC067568
IPI:IPI00505401 RefSeq:NP_997976.1 UniGene:Dr.80721
ProteinModelPortal:Q6NWJ4 Ensembl:ENSDART00000103463 GeneID:403080
KEGG:dre:403080 eggNOG:NOG297510 InParanoid:Q6NWJ4 NextBio:20816872
Bgee:Q6NWJ4 Uniprot:Q6NWJ4
Length = 618
Score = 128 (50.1 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 24/62 (38%), Positives = 38/62 (61%)
Query: 22 SRSTSWTKEENKRFESALAIYSESTPDRWIKVAAMIPGKTVLDVIKQYKELEEDVSDIEA 81
S + +WT EE K E AL Y ST +RW +++ +PG++ D +K+YKEL E + +A
Sbjct: 548 SNAAAWTTEEQKLLEQALKTYPVSTAERWERISEAVPGRSKKDCMKRYKELVEMIKAKKA 607
Query: 82 GR 83
+
Sbjct: 608 AQ 609
>TAIR|locus:2075049 [details] [associations]
symbol:RVE8 "REVEILLE 8" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=RCA;TAS]
[GO:0009651 "response to salt stress" evidence=IEP;RCA] [GO:0009723
"response to ethylene stimulus" evidence=IEP;RCA] [GO:0009733
"response to auxin stimulus" evidence=IEP;RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=IEP;RCA] [GO:0009739
"response to gibberellin stimulus" evidence=IEP;RCA] [GO:0009751
"response to salicylic acid stimulus" evidence=IEP;RCA] [GO:0009753
"response to jasmonic acid stimulus" evidence=IEP;RCA] [GO:0046686
"response to cadmium ion" evidence=IEP;RCA] [GO:0032922 "circadian
regulation of gene expression" evidence=IMP] [GO:0043966 "histone
H3 acetylation" evidence=IMP] [GO:0048573 "photoperiodism,
flowering" evidence=IMP] [GO:0007623 "circadian rhythm"
evidence=RCA] [GO:0048574 "long-day photoperiodism, flowering"
evidence=RCA] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
SMART:SM00717 GO:GO:0009737 GO:GO:0046686 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0009733 GO:GO:0009753 GO:GO:0009723
GO:GO:0003677 GO:GO:0009651 GO:GO:0003700 GO:GO:0003682
GO:GO:0009751 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009739
GO:GO:0032922 GO:GO:0048573 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 HOGENOM:HOG000237512
GO:GO:0043966 ProtClustDB:CLSN2689417 EMBL:AY091106 EMBL:AY122969
IPI:IPI00517009 RefSeq:NP_187571.2 UniGene:At.40072
ProteinModelPortal:Q8RWU3 SMR:Q8RWU3 STRING:Q8RWU3 PRIDE:Q8RWU3
EnsemblPlants:AT3G09600.1 GeneID:820117 KEGG:ath:AT3G09600
TAIR:At3g09600 InParanoid:Q8RWU3 OMA:RVISPQH PhylomeDB:Q8RWU3
Genevestigator:Q8RWU3 Uniprot:Q8RWU3
Length = 298
Score = 123 (48.4 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 25/52 (48%), Positives = 34/52 (65%)
Query: 127 WTEEEHKRFLMGLIKYGKGDWRNISRNYVISKTPTQVASHAQKYFIRQLSGG 178
WTEEEH +FL L + + DW+ I ++V SKT Q+ SHAQKYF++ G
Sbjct: 46 WTEEEHDKFLEALQLFDR-DWKKIE-DFVGSKTVIQIRSHAQKYFLKVQKNG 95
>TAIR|locus:2149589 [details] [associations]
symbol:AT5G52660 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0009651 "response to salt stress" evidence=IEP] [GO:0009723
"response to ethylene stimulus" evidence=IEP] [GO:0009737 "response
to abscisic acid stimulus" evidence=IEP] [GO:0009739 "response to
gibberellin stimulus" evidence=IEP] [GO:0009751 "response to
salicylic acid stimulus" evidence=IEP] [GO:0009753 "response to
jasmonic acid stimulus" evidence=IEP] [GO:0046686 "response to
cadmium ion" evidence=IEP] InterPro:IPR001005 InterPro:IPR009057
Pfam:PF00249 SMART:SM00717 GO:GO:0009737 EMBL:CP002688
GO:GO:0046686 GO:GO:0009753 GO:GO:0009723 GO:GO:0003677
GO:GO:0009651 GO:GO:0003700 GO:GO:0003682 GO:GO:0009751
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009739 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294
HOGENOM:HOG000237512 eggNOG:NOG279643 EMBL:BT002002 EMBL:AY550303
EMBL:BT025882 IPI:IPI00536078 RefSeq:NP_568776.2 UniGene:At.29606
UniGene:At.67328 ProteinModelPortal:Q8H0W3 SMR:Q8H0W3
EnsemblPlants:AT5G52660.2 GeneID:835343 KEGG:ath:AT5G52660
TAIR:At5g52660 InParanoid:Q8H0W3 OMA:STSEPND PhylomeDB:Q8H0W3
ProtClustDB:CLSN2680521 ArrayExpress:Q8H0W3 Genevestigator:Q8H0W3
Uniprot:Q8H0W3
Length = 331
Score = 123 (48.4 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 30/87 (34%), Positives = 47/87 (54%)
Query: 98 LVSESDYDANRKRTLVAKSSDHERKKGVPWTEEEHKRFLMGLIKYGKGDWRNISRNYVIS 157
+VS S+ D ++K + K + + WTE EH +FL L + + DW+ I ++ S
Sbjct: 50 MVSSSEEDLSKK---IRKPYTITKSRE-SWTEPEHDKFLEALQLFDR-DWKKIEA-FIGS 103
Query: 158 KTPTQVASHAQKYFIRQLSGGKDKRRP 184
KT Q+ SHAQKYF++ G + P
Sbjct: 104 KTVIQIRSHAQKYFLKVQKSGTGEHLP 130
>TAIR|locus:504955890 [details] [associations]
symbol:AT3G10595 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
InterPro:IPR001005 InterPro:IPR009057 SMART:SM00717 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677 GO:GO:0003682
EMBL:AC013428 SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293
HOGENOM:HOG000237920 EMBL:BT015072 EMBL:BT015666 IPI:IPI00517930
RefSeq:NP_683547.2 UniGene:At.49612 ProteinModelPortal:Q9LPN9
SMR:Q9LPN9 EnsemblPlants:AT3G10595.1 GeneID:820228
KEGG:ath:AT3G10595 TAIR:At3g10595 eggNOG:NOG296411
InParanoid:Q9LPN9 OMA:KETHEWF PhylomeDB:Q9LPN9
ProtClustDB:CLSN2915149 Genevestigator:Q9LPN9 Uniprot:Q9LPN9
Length = 183
Score = 115 (45.5 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 32/95 (33%), Positives = 53/95 (55%)
Query: 26 SWTKEENKRFESALAIYSESTPDRWIKVAAMIPGKTVLDVIKQYKELEEDVSDIEAGRVP 85
SWT EEN+ F+ AL +++ R+ VA + ++V DV + YKEL D+ ++ + RV
Sbjct: 5 SWTTEENEMFKDALVMFTAFLLTRFESVAEYVD-RSVDDVKEHYKELVNDLLEMGSSRVA 63
Query: 86 IPGYLSSSFTLELVSESDYDANRKRTLVAKSSDHE 120
P L+ +++S Y A +RT+ K + HE
Sbjct: 64 FPNELTKD-----MAQSSYQA--ERTIWTKET-HE 90
>TAIR|locus:2151251 [details] [associations]
symbol:LCL1 "LHY/CCA1-like 1" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0009651 "response to salt stress" evidence=IEP;RCA] [GO:0009723
"response to ethylene stimulus" evidence=IEP;RCA] [GO:0009733
"response to auxin stimulus" evidence=IEP;RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=IEP;RCA] [GO:0009739
"response to gibberellin stimulus" evidence=IEP;RCA] [GO:0009751
"response to salicylic acid stimulus" evidence=IEP;RCA] [GO:0009753
"response to jasmonic acid stimulus" evidence=IEP;RCA] [GO:0046686
"response to cadmium ion" evidence=IEP;RCA] [GO:0007623 "circadian
rhythm" evidence=IMP] [GO:0048573 "photoperiodism, flowering"
evidence=RCA] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
SMART:SM00717 GO:GO:0009737 GO:GO:0005634 EMBL:CP002688
GO:GO:0046686 GO:GO:0009733 GO:GO:0009753 GO:GO:0009723
GO:GO:0003677 GO:GO:0007623 GO:GO:0009651 GO:GO:0003700
GO:GO:0003682 GO:GO:0009751 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0009739 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 HOGENOM:HOG000237512
EMBL:AY519514 EMBL:AJ937209 IPI:IPI00528959 RefSeq:NP_568108.1
RefSeq:NP_850756.1 UniGene:At.20108 ProteinModelPortal:Q6R0G4
SMR:Q6R0G4 STRING:Q6R0G4 EnsemblPlants:AT5G02840.1
EnsemblPlants:AT5G02840.2 GeneID:831766 KEGG:ath:AT5G02840
TAIR:At5g02840 eggNOG:NOG319149 InParanoid:Q6R0G4 OMA:AYTITKS
PhylomeDB:Q6R0G4 ProtClustDB:CLSN2689417 Genevestigator:Q6R0G4
Uniprot:Q6R0G4
Length = 293
Score = 121 (47.7 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 32/94 (34%), Positives = 50/94 (53%)
Query: 86 IPGYLSSSFTLELVSESDY-DANRKRTLVAKSSDHERKKGVPWTEEEHKRFLMGLIKYGK 144
IP S+ T ++ ++ +A K+ A + R+ WTE EH +FL L + +
Sbjct: 12 IPAETSTDATETTIATTEAGEAPEKKVRKAYTITKSRES---WTEGEHDKFLEALQLFDR 68
Query: 145 GDWRNISRNYVISKTPTQVASHAQKYFIRQLSGG 178
DW+ I ++V SKT Q+ SHAQKYF++ G
Sbjct: 69 -DWKKIE-DFVGSKTVIQIRSHAQKYFLKVQKNG 100
>FB|FBgn0037051 [details] [associations]
symbol:CG10565 species:7227 "Drosophila melanogaster"
[GO:0006457 "protein folding" evidence=ISS] [GO:0051082 "unfolded
protein binding" evidence=ISS] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
InterPro:IPR001623 Pfam:PF00226 EMBL:AE014296 GO:GO:0003677
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:1.10.287.110
SMART:SM00271 SUPFAM:SSF46565 PROSITE:PS50076 InterPro:IPR017877
PROSITE:PS50090 HSSP:P25685 GeneTree:ENSGT00530000063419
eggNOG:COG5269 KO:K09522 OMA:RWFEAFI EMBL:AY069523
RefSeq:NP_001246856.1 RefSeq:NP_649284.1 UniGene:Dm.2089 SMR:Q9VP77
IntAct:Q9VP77 MINT:MINT-1003869 STRING:Q9VP77
EnsemblMetazoa:FBtr0078323 EnsemblMetazoa:FBtr0305502 GeneID:40332
KEGG:dme:Dmel_CG10565 UCSC:CG10565-RA FlyBase:FBgn0037051
InParanoid:Q9VP77 OrthoDB:EOG4STQKT GenomeRNAi:40332 NextBio:818219
Uniprot:Q9VP77
Length = 646
Score = 122 (48.0 bits), Expect = 0.00015, P = 0.00015
Identities = 24/54 (44%), Positives = 34/54 (62%)
Query: 24 STSWTKEENKRFESALAIYSESTPDRWIKVAAMIPGKTVLDVIKQYKELEEDVS 77
S +WTKEE E A+ Y +TPDRW +AA IP ++ D +++ KEL E V+
Sbjct: 583 SKTWTKEEQALLEQAIKTYPTTTPDRWDCIAACIPNRSKKDCLRRVKELVELVN 636
>TAIR|locus:2200970 [details] [associations]
symbol:LHY "LATE ELONGATED HYPOCOTYL" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=RCA;TAS] [GO:0009651 "response to salt stress"
evidence=IEP;RCA] [GO:0009723 "response to ethylene stimulus"
evidence=IEP;RCA] [GO:0009733 "response to auxin stimulus"
evidence=IEP;RCA] [GO:0009737 "response to abscisic acid stimulus"
evidence=IEP;RCA] [GO:0009739 "response to gibberellin stimulus"
evidence=IEP;RCA] [GO:0009751 "response to salicylic acid stimulus"
evidence=IEP;RCA] [GO:0009753 "response to jasmonic acid stimulus"
evidence=IEP;RCA] [GO:0046686 "response to cadmium ion"
evidence=IEP] [GO:0048574 "long-day photoperiodism, flowering"
evidence=IGI;RCA] [GO:0042752 "regulation of circadian rhythm"
evidence=RCA;IMP] [GO:0043433 "negative regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IMP] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0007623 "circadian rhythm"
evidence=IGI;RCA] [GO:0009409 "response to cold" evidence=IGI]
[GO:0042754 "negative regulation of circadian rhythm" evidence=IMP]
[GO:0009639 "response to red or far red light" evidence=RCA]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009737 GO:GO:0005634
GO:GO:0046686 GO:GO:0009733 GO:GO:0009753 GO:GO:0009723
GO:GO:0007623 GO:GO:0009651 GO:GO:0009409 GO:GO:0003700
GO:GO:0006351 GO:GO:0003682 GO:GO:0009751 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0044212 GO:GO:0009739 GO:GO:0043433
InterPro:IPR017930 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 GO:GO:0048574 HOGENOM:HOG000084594 GO:GO:0042754
EMBL:AC007323 EMBL:AJ006404 EMBL:AY519507 EMBL:AK316728
EMBL:AK316829 IPI:IPI00517620 RefSeq:NP_001030924.1
RefSeq:NP_171614.1 RefSeq:NP_849568.1 UniGene:At.25466
ProteinModelPortal:Q6R0H1 SMR:Q6R0H1 IntAct:Q6R0H1 STRING:Q6R0H1
PRIDE:Q6R0H1 EnsemblPlants:AT1G01060.1 EnsemblPlants:AT1G01060.2
EnsemblPlants:AT1G01060.3 GeneID:839341 KEGG:ath:AT1G01060
GeneFarm:1653 TAIR:At1g01060 eggNOG:NOG269073 InParanoid:Q6R0H1
KO:K12133 OMA:QKFFTKL PhylomeDB:Q6R0H1 ProtClustDB:CLSN2682827
Uniprot:Q6R0H1
Length = 645
Score = 116 (45.9 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 22/47 (46%), Positives = 32/47 (68%)
Query: 127 WTEEEHKRFLMGLIKYGKGDWRNISRNYVISKTPTQVASHAQKYFIR 173
WTE+EH+RFL L YG+ W+ I ++ +KT Q+ SHAQK+F +
Sbjct: 27 WTEDEHERFLEALRLYGRA-WQRIEE-HIGTKTAVQIRSHAQKFFTK 71
Score = 46 (21.3 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 16/68 (23%), Positives = 33/68 (48%)
Query: 185 SIHDITTG---NLTNSVSSDNHKPSSFD-QSNVIPAQQKSLGTPKVGLEWTDSNNGEVMA 240
++HD T NL + S ++ PS D +++ + +K K ++ TD N +V+
Sbjct: 451 AVHDSNTAQKKNLVDRSSCGSNTPSGSDAETDALDKMEKD----KEDVKETDENQPDVIE 506
Query: 241 SDSTQSNM 248
++ + M
Sbjct: 507 LNNRKIKM 514
>TAIR|locus:2044345 [details] [associations]
symbol:CCA1 "circadian clock associated 1" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;IDA]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0009651 "response to salt stress" evidence=IEP;RCA] [GO:0009723
"response to ethylene stimulus" evidence=IEP;RCA] [GO:0009733
"response to auxin stimulus" evidence=IEP;RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=IEP;RCA] [GO:0009739
"response to gibberellin stimulus" evidence=IEP;RCA] [GO:0009751
"response to salicylic acid stimulus" evidence=IEP;RCA] [GO:0009753
"response to jasmonic acid stimulus" evidence=IEP;RCA] [GO:0046686
"response to cadmium ion" evidence=IEP] [GO:0010243 "response to
organic nitrogen" evidence=IEP] [GO:0048574 "long-day
photoperiodism, flowering" evidence=IGI;RCA] [GO:0007623 "circadian
rhythm" evidence=IEP;IGI;RCA;IMP;TAS] [GO:0019904 "protein domain
specific binding" evidence=ISS] [GO:0043496 "regulation of protein
homodimerization activity" evidence=IMP] [GO:0009409 "response to
cold" evidence=IGI] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0042754 "negative regulation of circadian rhythm"
evidence=IMP] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0009639 "response to red or far
red light" evidence=RCA] [GO:0010264 "myo-inositol hexakisphosphate
biosynthetic process" evidence=RCA] [GO:0042752 "regulation of
circadian rhythm" evidence=RCA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] InterPro:IPR001005
InterPro:IPR009057 Pfam:PF00249 SMART:SM00717 GO:GO:0009737
GO:GO:0005634 GO:GO:0046686 GO:GO:0045892 GO:GO:0045893
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009733 GO:GO:0009753
GO:GO:0009723 GO:GO:0007623 GO:GO:0009651 GO:GO:0009409
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 GO:GO:0003682
GO:GO:0009751 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009739
GO:GO:0010243 GO:GO:0043496 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AC005310 GO:GO:0048574
EMBL:U28422 EMBL:U79156 EMBL:AY519511 EMBL:BT001096 EMBL:BT001105
IPI:IPI00522826 IPI:IPI00545715 PIR:T02684 RefSeq:NP_850460.1
RefSeq:NP_850461.1 UniGene:At.10956 ProteinModelPortal:P92973
SMR:P92973 IntAct:P92973 STRING:P92973 PRIDE:P92973
EnsemblPlants:AT2G46830.1 GeneID:819296 KEGG:ath:AT2G46830
GeneFarm:1652 TAIR:At2g46830 eggNOG:NOG310744 HOGENOM:HOG000084594
InParanoid:P92973 KO:K12134 OMA:HPEMANE PhylomeDB:P92973
ProtClustDB:CLSN2918288 GO:GO:0042754 Uniprot:P92973
Length = 608
Score = 119 (46.9 bits), Expect = 0.00030, P = 0.00030
Identities = 23/45 (51%), Positives = 30/45 (66%)
Query: 127 WTEEEHKRFLMGLIKYGKGDWRNISRNYVISKTPTQVASHAQKYF 171
WTEEEH RF+ L YG+ W+ I +V +KT Q+ SHAQK+F
Sbjct: 27 WTEEEHNRFIEALRLYGRA-WQKIEE-HVATKTAVQIRSHAQKFF 69
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.311 0.127 0.369 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 286 286 0.00086 115 3 11 23 0.45 34
33 0.42 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 57
No. of states in DFA: 611 (65 KB)
Total size of DFA: 216 KB (2119 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 27.21u 0.10s 27.31t Elapsed: 00:00:01
Total cpu time: 27.22u 0.10s 27.32t Elapsed: 00:00:01
Start: Sat May 11 16:10:41 2013 End: Sat May 11 16:10:42 2013