BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 023198
         (286 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|302393778|sp|P42739.2|UBIQP_ACECL RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
           Contains: RecName: Full=Ubiquitin-related 1; Contains:
           RecName: Full=Ubiquitin-related 2; Flags: Precursor
 gi|433970|emb|CAA82268.1| polyubiquitin [Acetabularia peniculus]
          Length = 423

 Score =  168 bits (425), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 110/287 (38%), Positives = 167/287 (58%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ +E +K +I  K  E I  D   L +AG+QLE+GLT+ DY I   S +H    
Sbjct: 56  LEVQSSDTVENVKSKIQDK--EGIPPDQQRLIFAGKQLEDGLTLADYNIQKESTLHLVLR 113

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDT+EN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 114 LRGGMQIFVKTLTG-KTITLEVESSDTVENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 172

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + TV +VK  ++  +  IP 
Sbjct: 173 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTVENVKSKIQD-KEGIPP 231

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 232 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 291

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           V +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 292 VENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 338



 Score =  164 bits (415), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 108/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ +E +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 132 LEVESSDTVENVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 189

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDT+EN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 190 LRGGMQIFVKTLTG-KTITLEVESSDTVENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 248

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + TV +VK  ++  +  IP 
Sbjct: 249 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTVENVKSKIQD-KEGIPP 307

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 308 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 367

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           V +VK K+  + G  PD QR++F  +QLED R LA Y I  ES ++L
Sbjct: 368 VENVKSKIQDKEGIPPDQQRIIFAGKQLEDGRTLADYNIQKESTLHL 414



 Score =  161 bits (408), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 102/261 (39%), Positives = 152/261 (58%), Gaps = 8/261 (3%)

Query: 27  DLPELFYAGQQLENGLTVIDYGIPNNSVIH---NDSGVMKLYFKTPSNEKTFELKANRSD 83
           D   L +AG+QLE+G T+ DY I   S +H      G M+++ KT +  KT  L+   SD
Sbjct: 4   DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG-KTITLEVQSSD 62

Query: 84  TIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEIFV 143
           T+EN+K  I+ +EGIP  +  + + GK +E  +TL   NI  E TL ++   +   +IFV
Sbjct: 63  TVENVKSKIQDKEGIPPDQQRLIFAGKQLEDGLTLADYNIQKESTLHLVLRLRGGMQIFV 122

Query: 144 QTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKEN 202
           +T T  T+ LEV  + TV +VK  ++  +  IP +   L   G+QL++ +TLA Y+I++ 
Sbjct: 123 KTLTGKTITLEVESSDTVENVKSKIQD-KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKE 181

Query: 203 EVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQ 260
             L ++  ++    IFVK L G+ I LEV   DTV +VK K+  + G  PD QRL+F  +
Sbjct: 182 STLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTVENVKSKIQDKEGIPPDQQRLIFAGK 241

Query: 261 QLEDDRNLASYKIVNESIVNL 281
           QLED R LA Y I  ES ++L
Sbjct: 242 QLEDGRTLADYNIQKESTLHL 262



 Score =  110 bits (276), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 74/220 (33%), Positives = 124/220 (56%), Gaps = 8/220 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ +E +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 208 LEVESSDTVENVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 265

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDT+EN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 266 LRGGMQIFVKTLTG-KTITLEVESSDTVENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 324

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + TV +VK  ++  +  IP 
Sbjct: 325 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTVENVKSKIQD-KEGIPP 383

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSIF 216
           +   +   G+QL++ +TLA Y+I++   L ++  ++   F
Sbjct: 384 DQQRIIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGAF 423



 Score =  110 bits (275), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 72/187 (38%), Positives = 107/187 (57%), Gaps = 4/187 (2%)

Query: 98  IPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRR 156
           IP  +  + + GK +E   TL   NI  E TL ++   +   +IFV+T T  T+ LEV+ 
Sbjct: 1   IPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVQS 60

Query: 157 AHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS-- 214
           + TV +VK  ++  +  IP +   L   G+QL++  TLA Y+I++   L ++  ++    
Sbjct: 61  SDTVENVKSKIQD-KEGIPPDQQRLIFAGKQLEDGLTLADYNIQKESTLHLVLRLRGGMQ 119

Query: 215 IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIV 274
           IFVK L G+ I LEV   DTV +VK K+  + G  PD QRL+F  +QLED R LA Y I 
Sbjct: 120 IFVKTLTGKTITLEVESSDTVENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 179

Query: 275 NESIVNL 281
            ES ++L
Sbjct: 180 KESTLHL 186


>gi|384252612|gb|EIE26088.1| hexaubiquitin protein [Coccomyxa subellipsoidea C-169]
          Length = 457

 Score =  165 bits (418), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 109/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIENVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKSKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 251 IENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 297



 Score =  165 bits (418), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 109/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIENVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKSKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 327 IENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 373



 Score =  165 bits (418), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 109/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVESSDTIENVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVESSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKSKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 403 IENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 449



 Score =  136 bits (342), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 86/223 (38%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKSKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  109 bits (273), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 75/216 (34%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVESSDTIENVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVESSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKSKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TLA Y+I++   L ++  ++
Sbjct: 419 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 454


>gi|395295|emb|CAA52290.1| polyubiquitin [Volvox carteri f. nagariensis]
          Length = 381

 Score =  165 bits (418), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 109/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 297



 Score =  165 bits (418), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 109/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 327 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 373



 Score =  135 bits (341), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 86/223 (38%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  111 bits (277), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 75/219 (34%), Positives = 124/219 (56%), Gaps = 8/219 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVESSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSI 215
           +   L   G+QL++ +TLA Y+I++   L ++  ++  +
Sbjct: 343 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGL 381


>gi|302843878|ref|XP_002953480.1| polyubiquitin [Volvox carteri f. nagariensis]
 gi|300261239|gb|EFJ45453.1| polyubiquitin [Volvox carteri f. nagariensis]
          Length = 305

 Score =  165 bits (418), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 109/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 297



 Score =  135 bits (341), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 86/223 (38%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  110 bits (276), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 75/219 (34%), Positives = 124/219 (56%), Gaps = 8/219 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSI 215
           +   L   G+QL++ +TLA Y+I++   L ++  ++  +
Sbjct: 267 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGL 305


>gi|2894308|emb|CAA11269.1| polyubiquitin [Nicotiana tabacum]
          Length = 381

 Score =  165 bits (418), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 109/287 (37%), Positives = 167/287 (58%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIENVKQKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK+ ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKQKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 251 IENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 297



 Score =  165 bits (418), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 109/287 (37%), Positives = 167/287 (58%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIENVKQKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK+ ++  +  IP 
Sbjct: 208 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKQKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 327 IENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 373



 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 86/223 (38%), Positives = 132/223 (59%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK+ ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKQKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  110 bits (274), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 75/216 (34%), Positives = 124/216 (57%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVESSDTIENVKQKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK+ ++  +  IP 
Sbjct: 284 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKQKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TLA Y+I++   L ++  ++
Sbjct: 343 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 378


>gi|384246185|gb|EIE19676.1| polyubiquitin [Coccomyxa subellipsoidea C-169]
          Length = 305

 Score =  165 bits (418), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 109/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIENVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKSKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 251 IENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 297



 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 86/223 (38%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKSKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  109 bits (273), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 75/216 (34%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIENVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKSKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TLA Y+I++   L ++  ++
Sbjct: 267 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 302


>gi|302595808|sp|P0CH27.1|RL402_TRYCR RecName: Full=Ubiquitin-60S ribosomal protein L40; Contains:
           RecName: Full=Ubiquitin; Contains: RecName: Full=60S
           ribosomal protein L40; Flags: Precursor
 gi|162337|gb|AAA30271.1| ubiquitin precursor [Trypanosoma cruzi]
          Length = 356

 Score =  164 bits (416), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 109/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTIALEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVESSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 297



 Score =  134 bits (338), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 86/223 (38%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTIALEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVESSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVESSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  111 bits (277), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 75/220 (34%), Positives = 124/220 (56%), Gaps = 8/220 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTIALEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVESSDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSIF 216
           +   L   G+QL++ +TLA Y+I++   L ++  ++  + 
Sbjct: 267 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGVM 306


>gi|112983984|ref|NP_001036839.1| polyubiquitin [Bombyx mori]
 gi|4587236|dbj|BAA76676.1| polyubiquitin [Bombyx mori]
          Length = 913

 Score =  164 bits (415), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 108/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 395 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 452

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 453 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 511

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 512 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 570

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL+N +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 571 DQQRLIFAGKQLENGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 630

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 631 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 677



 Score =  164 bits (415), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 108/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLENG T+ DY I   S +H    
Sbjct: 547 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLENGRTLSDYNIQKESTLHLVLR 604

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 605 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 663

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 664 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 722

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 723 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 782

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 783 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 829



 Score =  162 bits (411), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 167/287 (58%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 471 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 528

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E+  T
Sbjct: 529 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLENGRT 587

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 588 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 646

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 647 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 706

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 707 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 753



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 403 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 419 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 478

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 479 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 525



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 623 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 680

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 681 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 739

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 740 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 798

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 799 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 858

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 859 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 905



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  132 bits (333), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  109 bits (272), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 74/219 (33%), Positives = 124/219 (56%), Gaps = 8/219 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 699 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 756

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 757 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 815

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 816 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 874

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSI 215
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  +
Sbjct: 875 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 913


>gi|242021992|ref|XP_002431426.1| ubiquitin, putative [Pediculus humanus corporis]
 gi|212516707|gb|EEB18688.1| ubiquitin, putative [Pediculus humanus corporis]
          Length = 844

 Score =  164 bits (415), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 109/288 (37%), Positives = 166/288 (57%), Gaps = 11/288 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQII---RHVKHSIFVKLLNGRYIILEVAKFD 233
           +   L   G+QL++ +TL+ Y+I++   L ++   R  K  IFVK L G+ I LEV   D
Sbjct: 419 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGKMQIFVKTLTGKTITLEVEASD 478

Query: 234 TVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           T+ +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 479 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 526



 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 403 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449



 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 472 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 529

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 530 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 588

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 589 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 647

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 648 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 707

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 708 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 754



 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 548 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 605

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 606 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 664

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 665 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 723

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 724 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 783

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 784 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 830



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/288 (37%), Positives = 166/288 (57%), Gaps = 11/288 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIHN--- 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 395 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 452

Query: 58  -DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYI 116
              G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   
Sbjct: 453 LRGGKMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 511

Query: 117 TLDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIP 175
           TL   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP
Sbjct: 512 TLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIP 570

Query: 176 SEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFD 233
            +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   D
Sbjct: 571 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASD 630

Query: 234 TVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           T+ +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 631 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 678



 Score =  159 bits (402), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 107/288 (37%), Positives = 166/288 (57%), Gaps = 11/288 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 319 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 377 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 435

Query: 118 LDVLNINNEDTLQMI-SVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIP 175
           L   NI  E TL ++  +     +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP
Sbjct: 436 LSDYNIQKESTLHLVLRLRGGKMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIP 494

Query: 176 SEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFD 233
            +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   D
Sbjct: 495 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASD 554

Query: 234 TVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           T+ +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 555 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 602



 Score =  133 bits (334), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  111 bits (278), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 75/220 (34%), Positives = 124/220 (56%), Gaps = 8/220 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 624 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 681

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 682 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 740

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 741 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 799

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSIF 216
           +   L   G+QL++ +TL+ Y+I++   L ++  ++   F
Sbjct: 800 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGFF 839


>gi|260600300|gb|ACX46987.1| ubiquitin [Guzmania wittmackii x Guzmania lingulata]
          Length = 441

 Score =  164 bits (414), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 108/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           E   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 EQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 251 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 297



 Score =  162 bits (411), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPEQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 327 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 373



 Score =  146 bits (368), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 98/270 (36%), Positives = 156/270 (57%), Gaps = 10/270 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  +   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVESSDTIDNVKAKIQDK--EGIPPEQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLED 264
           + +VK K+  + G  PD QRL+F  +QLED
Sbjct: 403 IDNVKAKIQDKEGIPPDQQRLIFAGKQLED 432



 Score =  131 bits (330), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  P+ QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPEQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221


>gi|326517545|dbj|BAK03691.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 457

 Score =  163 bits (412), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 108/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  V+  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKVQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 251 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 297



 Score =  162 bits (409), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  ++ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKVQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 327 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 373



 Score =  162 bits (409), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K ++  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVESSDTIDNVKAKVQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 403 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 449



 Score =  133 bits (335), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KAKVQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  108 bits (269), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 73/218 (33%), Positives = 123/218 (56%), Gaps = 8/218 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
           +   L   G+QL++ +TLA Y+I++   L ++  ++  
Sbjct: 419 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 456


>gi|571519|gb|AAA75310.1| polyubiquitin [Gracilaria gracilis]
 gi|1095488|prf||2109223A poly-ubiquitin
          Length = 457

 Score =  163 bits (412), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 167/287 (58%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIENVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T+ T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTAKTITLEVESSDTIENVKTKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  162 bits (409), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVESSDTIENVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLT-AKTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKTKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 403 IENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449



 Score =  160 bits (404), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 165/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIENVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKTKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L  + I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTAKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  133 bits (334), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKTKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  108 bits (270), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 74/216 (34%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVESSDTIENVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKTKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 419 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 454


>gi|15982787|gb|AAL09741.1| AT4g05320/C17L7_240 [Arabidopsis thaliana]
          Length = 381

 Score =  163 bits (412), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 167/287 (58%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H   +
Sbjct: 91  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLS 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 327 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 373



 Score =  163 bits (412), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLSLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 251 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 297



 Score =  133 bits (335), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLSLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  108 bits (269), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 73/216 (33%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TLA Y+I++   L ++  ++
Sbjct: 343 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 378


>gi|340939025|gb|EGS19647.1| hypothetical protein CTHT_0041260 [Chaetomium thermophilum var.
           thermophilum DSM 1495]
          Length = 305

 Score =  163 bits (412), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  133 bits (335), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  109 bits (272), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 74/212 (34%), Positives = 121/212 (57%), Gaps = 8/212 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQII 208
           +   L   G+QL++ +TL+ Y+I++   L ++
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298


>gi|67191208|ref|NP_066289.2| polyubiquitin-C [Homo sapiens]
          Length = 685

 Score =  163 bits (412), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 108/287 (37%), Positives = 167/287 (58%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IPS
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPS 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  161 bits (408), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVEPSDTIENVKAKIQDK--EGIPSDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 403 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449



 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPSDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 419 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 478

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 479 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 525



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 319 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 377 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 435

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 436 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 494

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 495 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 554

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 555 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 601



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 395 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 452

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 453 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 511

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 512 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 570

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 571 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 630

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 631 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 677



 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 130/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G   D QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPSDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  108 bits (270), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 74/219 (33%), Positives = 124/219 (56%), Gaps = 8/219 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 471 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 528

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 529 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 587

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 588 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 646

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSI 215
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  +
Sbjct: 647 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGV 685


>gi|391348265|ref|XP_003748368.1| PREDICTED: LOW QUALITY PROTEIN: polyubiquitin-A-like [Metaseiulus
           occidentalis]
          Length = 913

 Score =  163 bits (412), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 623 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYSIQKESTLHLVLR 680

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 681 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 739

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 740 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 798

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 799 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 858

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 859 IENVKAKIQDKEGXPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 905



 Score =  162 bits (411), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 167/287 (58%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T++DY I   S +H    
Sbjct: 395 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLLDYNIQKESTLHLVLR 452

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 453 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 511

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 512 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 570

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 571 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 630

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 631 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYSIQKESTLHL 677



 Score =  159 bits (403), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 165/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL  Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 419 DQQRLIFAGKQLEDGRTLLDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 478

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 479 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 525



 Score =  159 bits (402), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 547 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 604

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 605 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 663

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   +I  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 664 LSDYSIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 722

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 723 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 782

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 783 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 829



 Score =  158 bits (400), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 165/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE G T+ DY I   S +H    
Sbjct: 319 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLR 376

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 377 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 435

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 436 LLDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 494

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 495 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 554

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 555 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 601



 Score =  158 bits (399), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ IE +K+++  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LDVEASDTIENVKVKLQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL+  +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L  Y I  ES ++L
Sbjct: 403 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLLDYNIQKESTLHL 449



 Score =  157 bits (396), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+  + IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LDVELADTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGXTITLDVEASDTIENVKVKLQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  128 bits (322), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 129/223 (57%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L    +DTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLDVELADTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G  I L+V   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGXTITLDVEASDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K KL  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KVKLQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  105 bits (263), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 73/218 (33%), Positives = 122/218 (55%), Gaps = 8/218 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 699 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 756

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 757 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 815

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +   P 
Sbjct: 816 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGXPP 874

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  
Sbjct: 875 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 912


>gi|62911180|gb|AAX56917.1| polyubiquitin [Gracilaria lemaneiformis]
          Length = 457

 Score =  162 bits (411), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIENVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKTKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  162 bits (411), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIENVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKTKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  161 bits (408), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 165/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVESSDTIENVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKTKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES  +L
Sbjct: 403 IENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTPHL 449



 Score =  133 bits (335), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKTKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  105 bits (263), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 73/216 (33%), Positives = 122/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVESSDTIENVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKTKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++     ++  ++
Sbjct: 419 DQQRLIFAGKQLEDGRTLSDYNIQKESTPHLVLRLR 454


>gi|302393783|sp|P59669.2|UBIQP_GEOCY RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
           Contains: RecName: Full=Ubiquitin-related; Flags:
           Precursor
 gi|11154|emb|CAA50268.1| ubiquitin [Geodia cydonium]
          Length = 457

 Score =  162 bits (411), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVVRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 403 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449



 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVVRLRGGMQIFVKTLTGKTITLEVEASDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  133 bits (334), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 74/216 (34%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVVR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 419 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 454


>gi|902584|gb|AAC49013.1| polyubiquitin containing 7 ubiquitin monomers [Zea mays]
          Length = 533

 Score =  162 bits (411), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LADYNIQKESTLHLVVRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 419 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 478

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 479 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 525



 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 251 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 297



 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 327 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 373



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVVRLRGGMQIFVKTLTGKTITLEVESSDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 403 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 449



 Score =  134 bits (336), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  108 bits (269), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 73/218 (33%), Positives = 123/218 (56%), Gaps = 8/218 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 319 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVVR 376

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 377 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 435

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 436 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 494

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
           +   L   G+QL++ +TLA Y+I++   L ++  ++  
Sbjct: 495 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 532


>gi|224069394|ref|XP_002326346.1| predicted protein [Populus trichocarpa]
 gi|222833539|gb|EEE72016.1| predicted protein [Populus trichocarpa]
          Length = 306

 Score =  162 bits (411), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 167/287 (58%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K++I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVENSDTIDNVKVKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGNTITLEVESSDTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 251 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 297



 Score =  132 bits (333), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 130/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVENSDTIDNVKVKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G  I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGNTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  107 bits (267), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 73/220 (33%), Positives = 123/220 (55%), Gaps = 8/220 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +   T  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTGN-TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSIF 216
           +   L   G+QL++ +TLA Y+I++   L ++  ++   F
Sbjct: 267 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGDF 306


>gi|357123401|ref|XP_003563399.1| PREDICTED: LOW QUALITY PROTEIN: polyubiquitin-C-like [Brachypodium
           distachyon]
          Length = 535

 Score =  162 bits (411), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 251 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 297



 Score =  162 bits (411), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 327 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 373



 Score =  156 bits (394), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 105/289 (36%), Positives = 166/289 (57%), Gaps = 12/289 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQ--EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICI 174
           L   NI  E TL ++   +  Q  +IFV+T T  T+ L V  + T+ +VK  ++  +  +
Sbjct: 360 LADYNIQKESTLHLVLRLRGGQXMQIFVKTLTGKTITLXVESSDTIDNVKSKIQD-KEGL 418

Query: 175 PSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKF 232
           P +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   
Sbjct: 419 PPDQQRLIFAGKQLEDGRTLADYNIQKXSTLHLVLRLRGGMQIFVKTLTGKTITLEVKSS 478

Query: 233 DTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           DT+ +VK K+  + G  PD Q+L+F  +QLED R LA Y I  ES ++L
Sbjct: 479 DTIDNVKAKIQDKEGTPPDQQQLIFAGKQLEDGRTLADYNIQKESTLHL 527



 Score =  134 bits (336), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  102 bits (255), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 69/218 (31%), Positives = 121/218 (55%), Gaps = 10/218 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---- 56
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 319 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 376

Query: 57  -NDSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESY 115
                 M+++ KT +  KT  L    SDTI+N+K  I+ +EG+P  +  + + GK +E  
Sbjct: 377 LRGGQXMQIFVKTLTG-KTITLXVESSDTIDNVKSKIQDKEGLPPDQQRLIFAGKQLEDG 435

Query: 116 ITLDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICI 174
            TL   NI    TL ++   +   +IFV+T T  T+ LEV+ + T+ +VK  ++  +   
Sbjct: 436 RTLADYNIQKXSTLHLVLRLRGGMQIFVKTLTGKTITLEVKSSDTIDNVKAKIQD-KEGT 494

Query: 175 PSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           P +  +L   G+QL++ +TLA Y+I++   L ++  ++
Sbjct: 495 PPDQQQLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 532


>gi|225465625|ref|XP_002267452.1| PREDICTED: polyubiquitin 4-like isoform 1 [Vitis vinifera]
 gi|359488113|ref|XP_003633702.1| PREDICTED: polyubiquitin 4-like isoform 2 [Vitis vinifera]
          Length = 386

 Score =  162 bits (411), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 251 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 297



 Score =  162 bits (411), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 327 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 373



 Score =  134 bits (336), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  108 bits (269), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 73/218 (33%), Positives = 123/218 (56%), Gaps = 8/218 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
           +   L   G+QL++ +TLA Y+I++   L ++  ++  
Sbjct: 343 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 380


>gi|147834511|emb|CAN71997.1| hypothetical protein VITISV_004025 [Vitis vinifera]
          Length = 538

 Score =  162 bits (411), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           +KV+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I  +S +H    
Sbjct: 15  LKVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKDSTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDT +N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTR-KTITLEVESSDTTDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 251 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 297



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 403 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 449



 Score =  160 bits (405), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 165/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++  + +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTTDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 327 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 373



 Score =  160 bits (404), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 165/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 419 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 478

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L  Y I  ES ++L
Sbjct: 479 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLVDYNIQKESTLHL 525



 Score =  132 bits (333), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 130/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  LK   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLKVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPT-STVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  + TL ++   +   +IFV+T T  T+ LEV  + T  +VK  ++  +  IP +   
Sbjct: 60  NIQKDSTLHLVLRLRGGMQIFVKTLTRKTITLEVESSDTTDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  106 bits (265), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 73/218 (33%), Positives = 122/218 (55%), Gaps = 8/218 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 319 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 376

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 377 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 435

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 436 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 494

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
           +   L   G+QL++ +TL  Y+I++   L +I  ++  
Sbjct: 495 DQQRLIFAGKQLEDGRTLVDYNIQKESTLHLILRLRGG 532


>gi|297808451|ref|XP_002872109.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297317946|gb|EFH48368.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 383

 Score =  162 bits (411), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 92  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 149

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 150 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 208

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 209 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 267

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 268 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 327

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 328 IDNVKAKIQDKEGVPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 374



 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 16  LEVESSDTIDNVKAKIQDK--EGIPLDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 73

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 74  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 132

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 133 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 191

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 192 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 251

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 252 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 298



 Score =  135 bits (339), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 85/224 (37%), Positives = 133/224 (59%), Gaps = 5/224 (2%)

Query: 61  VMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDV 120
           +M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP+ +  + + GK +E   TL  
Sbjct: 1   MMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPLDQQRLIFAGKQLEDGRTLAD 59

Query: 121 LNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDC 179
            NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +  
Sbjct: 60  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQ 118

Query: 180 ELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRD 237
            L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +
Sbjct: 119 RLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDN 178

Query: 238 VKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 222



 Score =  109 bits (272), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 73/220 (33%), Positives = 124/220 (56%), Gaps = 8/220 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 168 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 225

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 226 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 284

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  +P 
Sbjct: 285 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGVPP 343

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSIF 216
           +   L   G+QL++ +TLA Y+I++   L ++  ++   F
Sbjct: 344 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGSF 383


>gi|16071|emb|CAA48140.1| ubiquitin [Antirrhinum majus]
          Length = 296

 Score =  162 bits (411), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 6   LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 63

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 64  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 122

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 123 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 181

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 182 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 241

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 242 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 288



 Score =  130 bits (328), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 82/212 (38%), Positives = 124/212 (58%), Gaps = 4/212 (1%)

Query: 73  KTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMI 132
           KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   NI  E TL ++
Sbjct: 2   KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 61

Query: 133 SVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNL 191
              +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ 
Sbjct: 62  LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQRLIFAGKQLEDG 120

Query: 192 KTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQA 249
           +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  
Sbjct: 121 RTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIP 180

Query: 250 PDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 181 PDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 212



 Score =  108 bits (269), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 73/216 (33%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 82  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 139

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 140 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 198

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 199 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 257

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TLA Y+I++   L ++  ++
Sbjct: 258 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 293



 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 29/60 (48%), Positives = 38/60 (63%)

Query: 222 GRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           G+ I LEV   DT+ +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 1   GKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 60


>gi|225465615|ref|XP_002267017.1| PREDICTED: polyubiquitin-C-like [Vitis vinifera]
          Length = 538

 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 403 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 449



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I  +S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKDSTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDT +N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTR-KTITLEVESSDTTDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LAHYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 251 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 297



 Score =  160 bits (405), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 165/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 419 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 478

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L  Y I  ES ++L
Sbjct: 479 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLVDYNIQKESTLHL 525



 Score =  157 bits (398), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++  + +K +I  K  E I  D   L +AG+QLE+G T+  Y I   S +H    
Sbjct: 91  LEVESSDTTDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLAHYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 327 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 373



 Score =  133 bits (334), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPT-STVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  + TL ++   +   +IFV+T T  T+ LEV  + T  +VK  ++  +  IP +   
Sbjct: 60  NIQKDSTLHLVLRLRGGMQIFVKTLTRKTITLEVESSDTTDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA+Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLAHYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 72/216 (33%), Positives = 122/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 319 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 376

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 377 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 435

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 436 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 494

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL  Y+I++   L ++  ++
Sbjct: 495 DQQRLIFAGKQLEDGRTLVDYNIQKESTLHLVLRLR 530


>gi|350416822|ref|XP_003491120.1| PREDICTED: LOW QUALITY PROTEIN: polyubiquitin-A-like [Bombus
           impatiens]
          Length = 611

 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 403 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449



 Score =  159 bits (401), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 107/288 (37%), Positives = 165/288 (57%), Gaps = 10/288 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 319 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 377 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 435

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++       S
Sbjct: 436 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPRS 495

Query: 177 EDCE-LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFD 233
            D + L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   D
Sbjct: 496 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASD 555

Query: 234 TVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           T+ +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 556 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 603



 Score =  133 bits (334), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  103 bits (258), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 74/214 (34%), Positives = 121/214 (56%), Gaps = 10/214 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 395 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 452

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVH--EYDIYYGGKLIESY 115
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP    +  + + GK +E  
Sbjct: 453 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPRSPDQQRLIFAGKQLEDG 511

Query: 116 ITLDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICI 174
            TL   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  I
Sbjct: 512 RTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGI 570

Query: 175 PSEDCELFRGGEQLQNLKTLAYYDIKENEVLQII 208
           P +   L   G+QL++ +TL+ Y+I++   L ++
Sbjct: 571 PPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 604


>gi|307206691|gb|EFN84646.1| Ubiquitin [Harpegnathos saltator]
          Length = 686

 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 403 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449



 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 419 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 478

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 479 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 525



 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 319 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 377 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 435

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 436 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 494

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 495 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 554

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 555 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 601



 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 395 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 452

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 453 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 511

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 512 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 570

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 571 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 630

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 631 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 677



 Score =  133 bits (334), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 74/216 (34%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 471 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 528

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 529 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 587

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 588 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 646

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 647 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 682


>gi|2760347|gb|AAB95251.1| ubiquitin [Arabidopsis thaliana]
          Length = 456

 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 251 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 297



 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 327 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 373



 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 403 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 449



 Score =  134 bits (336), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  108 bits (269), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 73/218 (33%), Positives = 123/218 (56%), Gaps = 8/218 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
           +   L   G+QL++ +TLA Y+I++   L ++  ++  
Sbjct: 419 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 456


>gi|326501424|dbj|BAK02501.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 457

 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 327 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 373



 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 403 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 449



 Score =  161 bits (408), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 165/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K  I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAEIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 251 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 297



 Score =  133 bits (335), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAEIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  108 bits (269), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 73/218 (33%), Positives = 123/218 (56%), Gaps = 8/218 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
           +   L   G+QL++ +TLA Y+I++   L ++  ++  
Sbjct: 419 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 456


>gi|156482|gb|AAA28154.1| polyubiquitin [Caenorhabditis elegans]
          Length = 838

 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 403 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449



 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 419 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 478

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 479 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 525



 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 319 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 377 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 435

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 436 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 494

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 495 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 554

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 555 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 601



 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 395 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 452

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 453 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 511

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 512 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 570

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 571 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 630

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 631 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 677



 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 471 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 528

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 529 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 587

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 588 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 646

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 647 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 706

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 707 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 753



 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 547 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 604

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 605 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 663

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 664 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 722

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 723 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 782

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  +S ++L
Sbjct: 783 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKQSTLHL 829



 Score =  133 bits (334), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 74/216 (34%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 623 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 680

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 681 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 739

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 740 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 798

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 799 DQQRLIFAGKQLEDGRTLSDYNIQKQSTLHLVLRLR 834


>gi|66510555|ref|XP_393173.2| PREDICTED: polyubiquitin-A-like isoform 1 [Apis mellifera]
 gi|328780726|ref|XP_003249849.1| PREDICTED: polyubiquitin-A-like [Apis mellifera]
          Length = 761

 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 419 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 478

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 479 IENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 525



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 319 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 377 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 435

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 436 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKTKIQD-KEGIPP 494

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 495 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 554

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 555 IENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 601



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 403 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 471 LEVEASDTIENVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 528

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 529 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 587

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 588 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 646

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 647 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 706

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 707 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 753



 Score =  162 bits (409), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 395 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 452

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 453 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 511

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 512 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKTKIQD-KEGIPP 570

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 571 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 630

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 631 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 677



 Score =  133 bits (334), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 74/216 (34%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 547 LEVEASDTIENVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 604

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 605 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 663

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 664 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 722

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 723 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 758


>gi|356548015|ref|XP_003542399.1| PREDICTED: polyubiquitin-A-like [Glycine max]
          Length = 614

 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 248 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 305

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 306 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 364

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 365 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 423

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 424 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 483

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 484 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 530



 Score =  162 bits (409), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 324 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 381

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 382 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 440

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 441 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 499

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ + LEV   DT
Sbjct: 500 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTVTLEVESSDT 559

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 560 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 606



 Score =  160 bits (405), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 107/292 (36%), Positives = 166/292 (56%), Gaps = 15/292 (5%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS------TVKLEVRRAHTVLDVKKMVESMR 171
           L   NI  E TL ++   +   +IFV+T T       T+ LEV  + T+ +VK  ++  +
Sbjct: 208 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLETITLEVESSDTIDNVKAKIQD-K 266

Query: 172 ICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEV 229
             IP +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV
Sbjct: 267 EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEV 326

Query: 230 AKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
              DT+ +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 327 ESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 378



 Score =  159 bits (403), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 106/291 (36%), Positives = 167/291 (57%), Gaps = 13/291 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNE----KTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIE 113
             G M+++ KT + +    +T  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E
Sbjct: 225 LRGGMQIFVKTLTGKTITLETITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLE 284

Query: 114 SYITLDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRI 172
              TL   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  + 
Sbjct: 285 DGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KE 343

Query: 173 CIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVA 230
            IP +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV 
Sbjct: 344 GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 403

Query: 231 KFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
             DT+ +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 404 SSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 454



 Score =  156 bits (394), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 107/292 (36%), Positives = 166/292 (56%), Gaps = 15/292 (5%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGR-----YIILEV 229
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+      I LEV
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLETITLEV 250

Query: 230 AKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
              DT+ +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 251 ESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 302



 Score =  134 bits (336), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 74/218 (33%), Positives = 123/218 (56%), Gaps = 8/218 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 400 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 457

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 458 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 516

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  TV LEV  + T+ +VK  ++  +  IP 
Sbjct: 517 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTVTLEVESSDTIDNVKAKIQD-KEGIPP 575

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
           +   L   G+QL++ +TLA Y+I++   L ++  ++  
Sbjct: 576 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 613


>gi|25151716|ref|NP_741157.1| Protein UBQ-1, isoform a [Caenorhabditis elegans]
 gi|302595957|sp|P0CG71.1|UBIQ1_CAEEL RecName: Full=Polyubiquitin-A; Contains: RecName: Full=Ubiquitin;
           Contains: RecName: Full=Ubiquitin-related; Flags:
           Precursor
 gi|373219552|emb|CCD68779.1| Protein UBQ-1, isoform a [Caenorhabditis elegans]
          Length = 838

 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 395 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 452

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 453 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 511

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 512 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 570

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 571 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 630

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 631 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 677



 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 471 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 528

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 529 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 587

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 588 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 646

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 647 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 706

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 707 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 753



 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 547 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 604

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 605 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 663

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 664 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 722

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 723 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 782

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 783 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 829



 Score =  160 bits (406), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 165/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 319 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT    KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 377 LRGGMQIFVKTLIG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 435

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 436 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 494

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 495 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 554

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 555 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 601



 Score =  160 bits (404), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 165/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T    T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LSDYNIQKESTLHLVLRLRGGMQIFVKTLIGKTITLEVEASDTIENVKAKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 419 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 478

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 479 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 525



 Score =  133 bits (334), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 74/218 (33%), Positives = 123/218 (56%), Gaps = 8/218 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 623 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 680

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 681 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 739

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 740 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 798

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  
Sbjct: 799 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 836


>gi|413935668|gb|AFW70219.1| polyubiquitin-like protein [Zea mays]
          Length = 502

 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 251 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 297



 Score =  147 bits (371), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 109/331 (32%), Positives = 168/331 (50%), Gaps = 53/331 (16%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVE-------- 168
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++        
Sbjct: 284 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQKESTLHLV 343

Query: 169 -----SMRI-------------------------------CIPSEDCELFRGGEQLQNLK 192
                 M+I                                IP +   L   G+QL++ +
Sbjct: 344 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 403

Query: 193 TLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAP 250
           TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  P
Sbjct: 404 TLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPP 463

Query: 251 DSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           D QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 464 DQQRLIFAGKQLEDGRTLADYNIQKESTLHL 494



 Score =  145 bits (365), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 107/332 (32%), Positives = 166/332 (50%), Gaps = 55/332 (16%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS---------------------- 214
           +   L   G+QL++ +TLA Y+I++   L ++  ++                        
Sbjct: 267 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 326

Query: 215 -------------------------IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQA 249
                                    IFVK L G+ I LEV   DT+ +VK K+  + G  
Sbjct: 327 IDNVKAKIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIP 386

Query: 250 PDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 387 PDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 418



 Score =  134 bits (336), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 74/261 (28%), Positives = 126/261 (48%), Gaps = 53/261 (20%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---- 56
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 300

Query: 57  -----------------------NDS---------------------GVMKLYFKTPSNE 72
                                  +D+                     G M+++ KT +  
Sbjct: 301 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQKESTLHLVLRLRGGMQIFVKTLTG- 359

Query: 73  KTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMI 132
           KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   NI  E TL ++
Sbjct: 360 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 419

Query: 133 SVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNL 191
              +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ 
Sbjct: 420 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQRLIFAGKQLEDG 478

Query: 192 KTLAYYDIKENEVLQIIRHVK 212
           +TLA Y+I++   L ++  ++
Sbjct: 479 RTLADYNIQKESTLHLVLRLR 499


>gi|356548684|ref|XP_003542730.1| PREDICTED: polyubiquitin 10-like [Glycine max]
          Length = 457

 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 327 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 373



 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 403 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 449



 Score =  162 bits (409), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 251 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 297



 Score =  133 bits (335), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  108 bits (269), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 73/218 (33%), Positives = 123/218 (56%), Gaps = 8/218 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
           +   L   G+QL++ +TLA Y+I++   L ++  ++  
Sbjct: 419 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 456


>gi|357474769|ref|XP_003607670.1| Ubiquitin [Medicago truncatula]
 gi|355508725|gb|AES89867.1| Ubiquitin [Medicago truncatula]
          Length = 533

 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 251 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 297



 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 327 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 373



 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 403 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 449



 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 419 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 478

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 479 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 525



 Score =  134 bits (336), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  108 bits (269), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 73/218 (33%), Positives = 123/218 (56%), Gaps = 8/218 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 319 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 376

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 377 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 435

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 436 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 494

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
           +   L   G+QL++ +TLA Y+I++   L ++  ++  
Sbjct: 495 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 532


>gi|357513725|ref|XP_003627151.1| Ubiquitin [Medicago truncatula]
 gi|327492449|dbj|BAK18565.1| polyubiquitin [Mesembryanthemum crystallinum]
 gi|355521173|gb|AET01627.1| Ubiquitin [Medicago truncatula]
          Length = 533

 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 251 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 297



 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 327 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 373



 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 403 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 449



 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 419 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 478

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 479 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 525



 Score =  134 bits (336), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  108 bits (269), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 73/218 (33%), Positives = 123/218 (56%), Gaps = 8/218 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 319 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 376

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 377 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 435

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 436 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 494

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
           +   L   G+QL++ +TLA Y+I++   L ++  ++  
Sbjct: 495 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 532


>gi|240255754|ref|NP_849299.4| polyubiquitin 10 [Arabidopsis thaliana]
 gi|240255758|ref|NP_849301.4| polyubiquitin 10 [Arabidopsis thaliana]
 gi|297809731|ref|XP_002872749.1| hexameric polyubiquitin [Arabidopsis lyrata subsp. lyrata]
 gi|449454712|ref|XP_004145098.1| PREDICTED: polyubiquitin 10-like [Cucumis sativus]
 gi|449471945|ref|XP_004153450.1| PREDICTED: polyubiquitin 10-like [Cucumis sativus]
 gi|302595948|sp|P0CG85.1|UBI1P_NICSY RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
           Flags: Precursor
 gi|302596003|sp|Q8H159.2|UBQ10_ARATH RecName: Full=Polyubiquitin 10; Contains: RecName: Full=Ubiquitin;
           Flags: Precursor
 gi|170352|gb|AAA34123.1| hexameric polyubiquitin [Nicotiana sylvestris]
 gi|870792|gb|AAA68878.1| polyubiquitin [Arabidopsis thaliana]
 gi|4115333|gb|AAD03341.1| ubiquitin [Pisum sativum]
 gi|4115335|gb|AAD03342.1| ubiquitin [Pisum sativum]
 gi|22655101|gb|AAM98141.1| polyubiquitin UBQ10 [Arabidopsis thaliana]
 gi|118481031|gb|ABK92469.1| unknown [Populus trichocarpa]
 gi|147805226|emb|CAN64480.1| hypothetical protein VITISV_002813 [Vitis vinifera]
 gi|241740189|gb|ACS68204.1| ubiquitin 10.1 [Brassica napus]
 gi|297318586|gb|EFH49008.1| hexameric polyubiquitin [Arabidopsis lyrata subsp. lyrata]
 gi|312282619|dbj|BAJ34175.1| unnamed protein product [Thellungiella halophila]
 gi|332657100|gb|AEE82500.1| polyubiquitin 10 [Arabidopsis thaliana]
 gi|332657102|gb|AEE82502.1| polyubiquitin 10 [Arabidopsis thaliana]
          Length = 457

 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 251 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 297



 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 327 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 373



 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 403 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 449



 Score =  134 bits (336), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  108 bits (269), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 73/218 (33%), Positives = 123/218 (56%), Gaps = 8/218 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
           +   L   G+QL++ +TLA Y+I++   L ++  ++  
Sbjct: 419 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 456


>gi|328856761|gb|EGG05881.1| hypothetical protein MELLADRAFT_87680 [Melampsora larici-populina
           98AG31]
          Length = 535

 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 327 IDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 373



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 251 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 297



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 419 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 478

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 479 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 525



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 403 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 449



 Score =  133 bits (335), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  107 bits (268), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 73/212 (34%), Positives = 121/212 (57%), Gaps = 8/212 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 319 LEVESSDTIDNVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 376

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 377 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 435

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 436 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 494

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQII 208
           +   L   G+QL++ +TLA Y+I++   L ++
Sbjct: 495 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 526


>gi|328780728|ref|XP_003249850.1| PREDICTED: polyubiquitin-A-like [Apis mellifera]
          Length = 685

 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 403 IENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKTKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 419 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 478

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 479 IENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 525



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  162 bits (409), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 395 LEVEASDTIENVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 452

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 453 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 511

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 512 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 570

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 571 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 630

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 631 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 677



 Score =  162 bits (409), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 319 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 377 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 435

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 436 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKTKIQD-KEGIPP 494

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 495 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 554

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 555 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 601



 Score =  133 bits (334), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  108 bits (270), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 74/216 (34%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 471 LEVEASDTIENVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 528

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 529 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 587

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 588 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 646

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 647 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 682


>gi|268571891|ref|XP_002641176.1| C. briggsae CBR-UBQ-1 protein [Caenorhabditis briggsae]
          Length = 762

 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 403 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449



 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 419 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 478

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 479 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 525



 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 319 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 377 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 435

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 436 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 494

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 495 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 554

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 555 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 601



 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 395 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 452

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 453 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 511

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 512 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 570

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 571 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 630

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 631 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 677



 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 471 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 528

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 529 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 587

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 588 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 646

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 647 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 706

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 707 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 753



 Score =  133 bits (334), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 74/216 (34%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 547 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 604

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 605 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 663

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 664 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 722

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 723 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 758


>gi|229577230|ref|NP_001153331.1| ubiquitin C-like [Nasonia vitripennis]
          Length = 610

 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 403 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449



 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 419 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 478

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 479 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 525



 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 319 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 377 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 435

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 436 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 494

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 495 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 554

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 555 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 601



 Score =  133 bits (334), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  109 bits (272), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 74/219 (33%), Positives = 124/219 (56%), Gaps = 8/219 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 395 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 452

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 453 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 511

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 512 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 570

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSI 215
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  +
Sbjct: 571 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 609


>gi|2760345|gb|AAB95250.1| ubiquitin [Arabidopsis thaliana]
          Length = 304

 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQRESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 251 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 297



 Score =  133 bits (335), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 130/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I+    L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQRESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  108 bits (269), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 73/216 (33%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQRESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TLA Y+I++   L ++  ++
Sbjct: 267 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 302


>gi|297812245|ref|XP_002874006.1| hypothetical protein ARALYDRAFT_488966 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297319843|gb|EFH50265.1| hypothetical protein ARALYDRAFT_488966 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 382

 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 251 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 297



 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 327 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 373



 Score =  133 bits (335), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQVFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  110 bits (274), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 74/220 (33%), Positives = 124/220 (56%), Gaps = 8/220 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSIF 216
           +   L   G+QL++ +TLA Y+I++   L ++  ++   F
Sbjct: 343 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGSF 382


>gi|18824|emb|CAA40324.1| hexaubiquitin protein [Helianthus annuus]
 gi|1204096|emb|CAA40325.1| hexaubiquitin protein [Helianthus annuus]
          Length = 457

 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 251 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 297



 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 327 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 373



 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 403 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 449



 Score =  134 bits (336), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  108 bits (269), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 73/218 (33%), Positives = 123/218 (56%), Gaps = 8/218 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
           +   L   G+QL++ +TLA Y+I++   L ++  ++  
Sbjct: 419 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 456


>gi|357148706|ref|XP_003574865.1| PREDICTED: polyubiquitin-like [Brachypodium distachyon]
          Length = 341

 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 51  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 108

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 109 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 167

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 168 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 226

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 227 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 286

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 287 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 333



 Score =  133 bits (335), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 37  MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 95

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 96  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 154

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 155 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 214

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 215 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 257



 Score =  107 bits (268), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 73/216 (33%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 127 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 184

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 185 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 243

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 244 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 302

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TLA Y+I++   L ++  ++
Sbjct: 303 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 338



 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 36/73 (49%), Positives = 45/73 (61%)

Query: 209 RHVKHSIFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNL 268
           R  K  IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+F  +QLED R L
Sbjct: 33  RLPKMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 92

Query: 269 ASYKIVNESIVNL 281
           A Y I  ES ++L
Sbjct: 93  ADYNIQKESTLHL 105


>gi|326511535|dbj|BAJ91912.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326522901|dbj|BAJ88496.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 457

 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 251 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 297



 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 327 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 373



 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 403 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 449



 Score =  134 bits (336), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  108 bits (269), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 73/212 (34%), Positives = 121/212 (57%), Gaps = 8/212 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQII 208
           +   L   G+QL++ +TLA Y+I++   L ++
Sbjct: 419 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 450


>gi|331236894|ref|XP_003331105.1| polyubiquitin-A [Puccinia graminis f. sp. tritici CRL 75-36-700-3]
 gi|309310095|gb|EFP86686.1| polyubiquitin-A [Puccinia graminis f. sp. tritici CRL 75-36-700-3]
          Length = 609

 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 251 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 297



 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 327 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 373



 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 403 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 449



 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 419 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 478

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 479 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 525



 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 319 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 376

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 377 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 435

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 436 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 494

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 495 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 554

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 555 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 601



 Score =  134 bits (336), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  109 bits (273), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 74/219 (33%), Positives = 124/219 (56%), Gaps = 8/219 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 395 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 452

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 453 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 511

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 512 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 570

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSI 215
           +   L   G+QL++ +TLA Y+I++   L ++  ++  I
Sbjct: 571 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGI 609


>gi|155965254|gb|ABU40645.1| polyubiquitin [Triticum aestivum]
          Length = 380

 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 251 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 297



 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 327 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 373



 Score =  134 bits (336), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  108 bits (269), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 73/218 (33%), Positives = 123/218 (56%), Gaps = 8/218 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
           +   L   G+QL++ +TLA Y+I++   L ++  ++  
Sbjct: 343 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 380


>gi|4150912|emb|CAA72799.1| polyubiquitin precursor [Suberites domuncula]
          Length = 381

 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  133 bits (334), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 74/216 (34%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 378


>gi|602076|emb|CAA54603.1| pentameric polyubiquitin [Nicotiana tabacum]
          Length = 346

 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 251 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 297



 Score =  134 bits (336), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  129 bits (323), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 88/248 (35%), Positives = 142/248 (57%), Gaps = 10/248 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 326

Query: 235 VRDVKDKL 242
           + +VK K+
Sbjct: 327 IDNVKAKI 334



 Score = 90.1 bits (222), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 61/172 (35%), Positives = 98/172 (56%), Gaps = 7/172 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVE 168
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++
Sbjct: 284 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 335



 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/102 (38%), Positives = 61/102 (59%), Gaps = 6/102 (5%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIP 99
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIP 341


>gi|248337|gb|AAB21993.1| polyubiquitin [Zea mays]
 gi|248339|gb|AAB21994.1| polyubiquitin [Zea mays]
 gi|33323474|gb|AAQ07454.1| ubiquitin [Musa acuminata]
 gi|52076878|dbj|BAD45891.1| polyubiquitin [Oryza sativa Japonica Group]
 gi|218198760|gb|EEC81187.1| hypothetical protein OsI_24193 [Oryza sativa Indica Group]
 gi|222636097|gb|EEE66229.1| hypothetical protein OsJ_22384 [Oryza sativa Japonica Group]
 gi|413926516|gb|AFW66448.1| ubiquitin2 [Zea mays]
 gi|413935667|gb|AFW70218.1| clone MubG1 ubiquitin [Zea mays]
          Length = 533

 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 251 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 297



 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 327 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 373



 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 403 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 449



 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 419 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 478

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 479 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 525



 Score =  134 bits (336), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  108 bits (269), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 73/218 (33%), Positives = 123/218 (56%), Gaps = 8/218 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 319 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 376

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 377 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 435

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 436 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 494

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
           +   L   G+QL++ +TLA Y+I++   L ++  ++  
Sbjct: 495 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 532


>gi|226502871|ref|NP_001148453.1| LOC100282068 [Zea mays]
 gi|224059606|ref|XP_002299930.1| predicted protein [Populus trichocarpa]
 gi|357474771|ref|XP_003607671.1| Ubiquitin [Medicago truncatula]
 gi|902586|gb|AAC49014.1| ubiquitin [Zea mays]
 gi|195619382|gb|ACG31521.1| polyubiquitin containing 7 ubiquitin monomers [Zea mays]
 gi|222847188|gb|EEE84735.1| predicted protein [Populus trichocarpa]
 gi|238013752|gb|ACR37911.1| unknown [Zea mays]
 gi|355508726|gb|AES89868.1| Ubiquitin [Medicago truncatula]
 gi|413926508|gb|AFW66440.1| putative ubiquitin family protein isoform 1 [Zea mays]
 gi|413926509|gb|AFW66441.1| putative ubiquitin family protein isoform 2 [Zea mays]
          Length = 381

 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 251 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 297



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 327 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 373



 Score =  133 bits (335), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  108 bits (269), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 73/216 (33%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TLA Y+I++   L ++  ++
Sbjct: 343 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 378


>gi|115444401|ref|NP_001045980.1| Os02g0161900 [Oryza sativa Japonica Group]
 gi|115469558|ref|NP_001058378.1| Os06g0681400 [Oryza sativa Japonica Group]
 gi|6013289|gb|AAF01315.1|AF184279_1 polyubiquitin [Oryza sativa Indica Group]
 gi|6013291|gb|AAF01316.1|AF184280_1 polyubiquitin [Oryza sativa Indica Group]
 gi|416038|emb|CAA53665.1| polyubiquitin [Oryza sativa Indica Group]
 gi|1574944|gb|AAC49806.1| polyubiquitin [Oryza sativa Indica Group]
 gi|49389251|dbj|BAD25213.1| polyubiquitin 6 [Oryza sativa Japonica Group]
 gi|113535511|dbj|BAF07894.1| Os02g0161900 [Oryza sativa Japonica Group]
 gi|113596418|dbj|BAF20292.1| Os06g0681400 [Oryza sativa Japonica Group]
 gi|215715366|dbj|BAG95117.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|218190115|gb|EEC72542.1| hypothetical protein OsI_05955 [Oryza sativa Indica Group]
 gi|222622224|gb|EEE56356.1| hypothetical protein OsJ_05481 [Oryza sativa Japonica Group]
 gi|284431760|gb|ADB84621.1| polyubiquitin [Oryza sativa Japonica Group]
 gi|306415955|gb|ADM86852.1| polyubiquitin [Oryza sativa Japonica Group]
 gi|326504784|dbj|BAK06683.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|332379898|gb|AEE65380.1| ubiquitin 2 [Panicum virgatum]
 gi|413926517|gb|AFW66449.1| ubiquitin2 [Zea mays]
          Length = 457

 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 251 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 297



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 327 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 373



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 403 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 449



 Score =  133 bits (335), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  108 bits (269), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 73/218 (33%), Positives = 123/218 (56%), Gaps = 8/218 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
           +   L   G+QL++ +TLA Y+I++   L ++  ++  
Sbjct: 419 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 456


>gi|393912432|gb|EJD76736.1| polyubiquitin, variant 1 [Loa loa]
          Length = 381

 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  133 bits (334), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 74/216 (34%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 378


>gi|357123434|ref|XP_003563415.1| PREDICTED: polyubiquitin-A-like [Brachypodium distachyon]
          Length = 609

 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 251 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 297



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 327 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 373



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 403 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 449



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 419 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 478

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 479 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 525



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 319 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 376

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 377 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 435

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 436 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 494

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 495 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 554

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 555 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 601



 Score =  134 bits (336), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  108 bits (269), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 73/218 (33%), Positives = 123/218 (56%), Gaps = 8/218 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 395 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 452

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 453 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 511

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 512 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 570

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
           +   L   G+QL++ +TLA Y+I++   L ++  ++  
Sbjct: 571 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 608


>gi|225461088|ref|XP_002282119.1| PREDICTED: polyubiquitin-A-like [Vitis vinifera]
          Length = 761

 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 251 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 297



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 327 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 373



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 403 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 449



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 419 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 478

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 479 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 525



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 319 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 376

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 377 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 435

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 436 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 494

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 495 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 554

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 555 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 601



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 395 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 452

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 453 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 511

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 512 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 570

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 571 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 630

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 631 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 677



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 471 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 528

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 529 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 587

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 588 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 646

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 647 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 706

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 707 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 753



 Score =  134 bits (336), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  108 bits (269), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 73/218 (33%), Positives = 123/218 (56%), Gaps = 8/218 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 547 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 604

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 605 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 663

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 664 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 722

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
           +   L   G+QL++ +TLA Y+I++   L ++  ++  
Sbjct: 723 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 760


>gi|124359683|gb|ABD32351.2| Ubiquitin [Medicago truncatula]
          Length = 538

 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 96  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 153

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 154 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 212

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 213 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 271

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 272 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 331

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 332 IDNVKAKILDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 378



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 20  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 77

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 78  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 136

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 137 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 195

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 196 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 255

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 256 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 302



 Score =  160 bits (406), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 165/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 248 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 305

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I  +EGIP  +  + + GK +E   T
Sbjct: 306 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKILDKEGIPPDQQRLIFAGKQLEDGRT 364

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 365 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 423

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 424 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 483

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 484 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 530



 Score =  159 bits (401), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 165/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 172 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 229

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 230 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 288

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  +   +  IP 
Sbjct: 289 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKILD-KEGIPP 347

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 348 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 407

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 408 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 454



 Score =  133 bits (335), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 6   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 64

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 65  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 123

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 124 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 183

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 184 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 226



 Score =  105 bits (263), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 73/216 (33%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 324 LEVESSDTIDNVKAKILDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 381

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 382 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 440

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 441 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 499

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TLA Y+I++   L ++  ++
Sbjct: 500 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 535



 Score = 65.1 bits (157), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 37/75 (49%), Positives = 48/75 (64%), Gaps = 2/75 (2%)

Query: 207 IIRHVKHSIFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDR 266
           IIR ++  IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+F  +QLED R
Sbjct: 2   IIRSMQ--IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 59

Query: 267 NLASYKIVNESIVNL 281
            LA Y I  ES ++L
Sbjct: 60  TLADYNIQKESTLHL 74


>gi|62083359|gb|AAX62404.1| polyubiquitin [Lysiphlebus testaceipes]
          Length = 538

 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 403 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 419 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 478

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 479 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 525



 Score =  160 bits (405), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 165/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L + G+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFVGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  131 bits (330), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFVGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  109 bits (273), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 74/221 (33%), Positives = 124/221 (56%), Gaps = 8/221 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 319 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 377 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 435

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 436 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 494

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSIFV 217
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    +
Sbjct: 495 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGALI 535


>gi|4115337|gb|AAD03343.1| ubiquitin [Pisum sativum]
          Length = 457

 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 251 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 297



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 327 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 373



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 403 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 449



 Score =  134 bits (336), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  109 bits (273), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 74/219 (33%), Positives = 124/219 (56%), Gaps = 8/219 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSI 215
           +   L   G+QL++ +TLA Y+I++   L ++  ++  I
Sbjct: 419 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGI 457


>gi|341879718|gb|EGT35653.1| hypothetical protein CAEBREN_32771 [Caenorhabditis brenneri]
          Length = 970

 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 71  LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 128

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 129 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 187

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 188 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 246

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 247 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 306

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 307 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 353



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 147 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 204

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 205 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 263

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 264 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 322

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 323 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 382

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 383 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 429



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 223 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 280

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 281 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 339

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 340 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 398

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 399 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 458

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 459 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 505



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 299 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 356

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 357 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 415

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 416 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 474

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 475 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 534

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 535 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 581



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 375 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 432

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 433 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 491

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 492 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 550

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 551 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 610

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 611 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 657



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 451 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 508

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 509 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 567

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 568 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 626

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 627 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 686

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 687 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 733



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 527 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 584

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 585 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 643

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 644 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 702

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 703 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 762

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 763 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 809



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 603 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 660

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 661 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 719

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 720 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 778

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 779 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 838

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 839 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 885



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 679 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 736

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 737 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 795

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 796 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 854

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 855 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 914

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 915 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 961



 Score =  134 bits (337), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 84/225 (37%), Positives = 132/225 (58%), Gaps = 5/225 (2%)

Query: 60  GVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLD 119
            +M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL 
Sbjct: 55  AIMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLS 113

Query: 120 VLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSED 178
             NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP + 
Sbjct: 114 DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPPDQ 172

Query: 179 CELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVR 236
             L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ 
Sbjct: 173 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIE 232

Query: 237 DVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 233 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 277



 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 74/212 (34%), Positives = 121/212 (57%), Gaps = 8/212 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 755 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 812

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 813 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 871

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 872 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 930

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQII 208
           +   L   G+QL++ +TL+ Y+I++   L ++
Sbjct: 931 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 962


>gi|241740196|gb|ACS68205.1| ubiquitin 10.2 [Brassica napus]
          Length = 381

 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 251 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 297



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 327 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 373



 Score =  134 bits (336), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  109 bits (273), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 74/219 (33%), Positives = 124/219 (56%), Gaps = 8/219 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSI 215
           +   L   G+QL++ +TLA Y+I++   L ++  ++  I
Sbjct: 343 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGI 381


>gi|302595954|sp|P0CG84.1|UBI4P_NICSY RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
           Flags: Precursor
 gi|170354|gb|AAA34124.1| pentameric polyubiquitin, partial [Nicotiana sylvestris]
          Length = 377

 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 11  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 68

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 69  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 127

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 128 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 186

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 187 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 246

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 247 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 293



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 87  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 144

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 145 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 203

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 204 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 262

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 263 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 322

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 323 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 369



 Score =  130 bits (327), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 82/212 (38%), Positives = 124/212 (58%), Gaps = 4/212 (1%)

Query: 73  KTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMI 132
           KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   NI  E TL ++
Sbjct: 7   KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 66

Query: 133 SVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNL 191
              +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ 
Sbjct: 67  LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQRLIFAGKQLEDG 125

Query: 192 KTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQA 249
           +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  
Sbjct: 126 RTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIP 185

Query: 250 PDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 186 PDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 217



 Score =  108 bits (269), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 73/218 (33%), Positives = 123/218 (56%), Gaps = 8/218 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 163 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 220

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 221 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 279

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 280 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 338

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
           +   L   G+QL++ +TLA Y+I++   L ++  ++  
Sbjct: 339 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 376



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/65 (49%), Positives = 41/65 (63%)

Query: 217 VKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNE 276
           VK L G+ I LEV   DT+ +VK K+  + G  PD QRL+F  +QLED R LA Y I  E
Sbjct: 1   VKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKE 60

Query: 277 SIVNL 281
           S ++L
Sbjct: 61  STLHL 65


>gi|332023427|gb|EGI63670.1| Ubiquitin [Acromyrmex echinatior]
          Length = 534

 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 403 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 419 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 478

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 479 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 525



 Score =  133 bits (334), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 74/216 (34%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 319 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 377 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 435

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 436 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 494

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 495 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 530


>gi|332021030|gb|EGI61419.1| Ubiquitin [Acromyrmex echinatior]
          Length = 459

 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 403 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449



 Score =  133 bits (334), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  110 bits (274), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 74/221 (33%), Positives = 125/221 (56%), Gaps = 8/221 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSIFV 217
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  + +
Sbjct: 419 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMLL 459


>gi|325181623|emb|CCA16073.1| polyubiquitin putative [Albugo laibachii Nc14]
          Length = 538

 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 251 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 297



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 327 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 373



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 403 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 449



 Score =  162 bits (409), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIDNVKAKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 419 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 478

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 479 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 525



 Score =  134 bits (336), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  107 bits (268), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 73/218 (33%), Positives = 123/218 (56%), Gaps = 8/218 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 319 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 376

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 377 LRGGMQIFVKTLTG-KTITLEVEASDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 435

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 436 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIDNVKAKIQD-KEGIPP 494

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
           +   L   G+QL++ +TLA Y+I++   L ++  ++  
Sbjct: 495 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 532


>gi|357475981|ref|XP_003608276.1| Ubiquitin [Medicago truncatula]
 gi|355509331|gb|AES90473.1| Ubiquitin [Medicago truncatula]
          Length = 533

 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IDNVKAKILDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  162 bits (409), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 251 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 297



 Score =  160 bits (405), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 165/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I  +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKILDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 419 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 478

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 479 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 525



 Score =  159 bits (401), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 165/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  +   +  IP 
Sbjct: 284 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKILD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 403 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 449



 Score =  133 bits (335), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  105 bits (263), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 73/218 (33%), Positives = 123/218 (56%), Gaps = 8/218 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 319 LEVESSDTIDNVKAKILDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 377 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 435

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 436 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 494

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
           +   L   G+QL++ +TLA Y+I++   L ++  ++  
Sbjct: 495 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 532


>gi|162461367|ref|NP_001105376.1| polyubiquitin [Zea mays]
 gi|899608|gb|AAC49025.1| polyubiquitin [Zea mays]
          Length = 381

 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 251 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 297



 Score =  162 bits (409), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVVRLRGGMQIFVKTLTGKTITLEVESSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 327 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 373



 Score =  133 bits (335), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  108 bits (269), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 73/216 (33%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LADYNIQKESTLHLVVRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TLA Y+I++   L ++  ++
Sbjct: 343 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 378


>gi|342298464|emb|CBY46746.1| polyubiquitin 10 protein [Lepidium campestre]
          Length = 381

 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 327 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 373



 Score =  161 bits (408), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ ++ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTVDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 251 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 297



 Score =  133 bits (334), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDT++N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTVDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  108 bits (269), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 73/218 (33%), Positives = 123/218 (56%), Gaps = 8/218 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
           +   L   G+QL++ +TLA Y+I++   L ++  ++  
Sbjct: 343 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 380


>gi|225465623|ref|XP_002267206.1| PREDICTED: polyubiquitin-C-like [Vitis vinifera]
          Length = 538

 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 251 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 297



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 327 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 373



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 403 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 449



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 419 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 478

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 479 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 525



 Score =  133 bits (335), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  108 bits (269), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 73/218 (33%), Positives = 123/218 (56%), Gaps = 8/218 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 319 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 376

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 377 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 435

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 436 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 494

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
           +   L   G+QL++ +TLA Y+I++   L ++  ++  
Sbjct: 495 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 532


>gi|168024852|ref|XP_001764949.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162683758|gb|EDQ70165.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 318

 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 251 IDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 297



 Score =  133 bits (335), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  108 bits (269), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 73/219 (33%), Positives = 124/219 (56%), Gaps = 8/219 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSI 215
           +   L   G+QL++ +TLA Y+I++   L ++  ++  +
Sbjct: 267 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGM 305


>gi|156552611|ref|XP_001599434.1| PREDICTED: polyubiquitin-A-like isoform 1 [Nasonia vitripennis]
 gi|345487600|ref|XP_003425726.1| PREDICTED: polyubiquitin-A-like isoform 2 [Nasonia vitripennis]
          Length = 913

 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 403 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 419 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 478

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 479 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 525



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 319 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 377 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 435

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 436 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 494

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 495 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 554

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 555 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 601



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 395 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 452

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 453 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 511

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 512 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 570

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 571 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 630

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 631 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 677



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 471 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 528

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 529 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 587

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 588 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 646

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 647 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 706

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 707 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 753



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 547 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 604

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 605 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 663

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 664 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 722

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 723 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 782

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 783 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 829



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 623 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 680

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 681 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 739

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 740 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 798

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 799 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 858

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 859 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 905



 Score =  133 bits (334), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 74/216 (34%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 699 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 756

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 757 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 815

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 816 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 874

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 875 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 910


>gi|16660462|gb|AAL27564.1|AF429430_1 polyubiquitin OUB2 [Olea europaea]
          Length = 457

 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 251 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 297



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 327 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 373



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 403 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 449



 Score =  133 bits (335), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  108 bits (270), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 73/219 (33%), Positives = 124/219 (56%), Gaps = 8/219 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSI 215
           +   L   G+QL++ +TLA Y+I++   L ++  ++  +
Sbjct: 419 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGL 457


>gi|4150898|emb|CAA76577.1| polyubiquitin [Suberites domuncula]
          Length = 305

 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  133 bits (334), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 74/216 (34%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 302


>gi|240255756|ref|NP_849300.4| polyubiquitin 10 [Arabidopsis thaliana]
 gi|240255762|ref|NP_567291.4| polyubiquitin 10 [Arabidopsis thaliana]
 gi|240255764|ref|NP_001078353.4| polyubiquitin 10 [Arabidopsis thaliana]
 gi|224132654|ref|XP_002327848.1| predicted protein [Populus trichocarpa]
 gi|449433926|ref|XP_004134747.1| PREDICTED: polyubiquitin-like isoform 1 [Cucumis sativus]
 gi|449433928|ref|XP_004134748.1| PREDICTED: polyubiquitin-like isoform 2 [Cucumis sativus]
 gi|302393785|sp|P69322.2|UBIQP_PEA RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
           Flags: Precursor
 gi|20589|emb|CAA34886.1| unnamed protein product [Pisum sativum]
 gi|4115339|gb|AAD03344.1| ubiquitin [Pisum sativum]
 gi|15450661|gb|AAK96602.1| AT4g05320/C17L7_240 [Arabidopsis thaliana]
 gi|49532982|dbj|BAD26592.1| polyubiquitin [Populus nigra]
 gi|82409051|gb|ABB73307.1| ubiquitin [Lotus japonicus]
 gi|118481117|gb|ABK92512.1| unknown [Populus trichocarpa]
 gi|118482690|gb|ABK93264.1| unknown [Populus trichocarpa]
 gi|118488167|gb|ABK95903.1| unknown [Populus trichocarpa]
 gi|118488391|gb|ABK96012.1| unknown [Populus trichocarpa]
 gi|118488630|gb|ABK96127.1| unknown [Populus trichocarpa]
 gi|217874292|gb|ACK56276.1| ubiquitin [Populus trichocarpa]
 gi|222837257|gb|EEE75636.1| predicted protein [Populus trichocarpa]
 gi|332657101|gb|AEE82501.1| polyubiquitin 10 [Arabidopsis thaliana]
 gi|332657104|gb|AEE82504.1| polyubiquitin 10 [Arabidopsis thaliana]
 gi|332657105|gb|AEE82505.1| polyubiquitin 10 [Arabidopsis thaliana]
 gi|226707|prf||1603402A poly-ubiquitin
          Length = 381

 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 251 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 297



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 327 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 373



 Score =  133 bits (335), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  108 bits (269), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 73/218 (33%), Positives = 123/218 (56%), Gaps = 8/218 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
           +   L   G+QL++ +TLA Y+I++   L ++  ++  
Sbjct: 343 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 380


>gi|413926513|gb|AFW66445.1| ubiquitin2 [Zea mays]
          Length = 535

 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 17  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 74

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 75  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 133

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 134 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 192

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 193 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 252

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 253 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 299



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 93  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 150

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 151 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 209

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 210 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 268

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 269 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 328

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 329 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 375



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 169 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 226

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 227 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 285

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 286 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 344

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 345 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 404

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 405 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 451



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 245 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 302

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 303 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 361

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 362 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 420

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 421 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 480

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 481 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 527



 Score =  133 bits (335), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 3   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 61

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 62  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 120

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 121 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 180

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 181 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 223



 Score =  108 bits (269), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 73/218 (33%), Positives = 123/218 (56%), Gaps = 8/218 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 321 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 378

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 379 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 437

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 438 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 496

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
           +   L   G+QL++ +TLA Y+I++   L ++  ++  
Sbjct: 497 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 534


>gi|328792775|ref|XP_395993.4| PREDICTED: polyubiquitin-A-like isoform 1 [Apis mellifera]
          Length = 795

 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 403 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 419 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 478

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 479 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 525



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 319 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 377 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 435

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 436 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 494

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 495 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 554

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 555 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 601



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 395 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 452

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 453 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 511

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 512 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 570

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 571 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 630

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 631 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 677



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 165/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 471 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 528

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 529 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 587

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 588 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 646

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 647 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 706

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L  Y I  ES ++L
Sbjct: 707 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLLDYNIQKESTLHL 753



 Score =  133 bits (334), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  107 bits (267), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 74/216 (34%), Positives = 122/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 547 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 604

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 605 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 663

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 664 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 722

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL  Y+I++   L ++  ++
Sbjct: 723 DQQRLIFAGKQLEDGRTLLDYNIQKESTLHLVLRLR 758


>gi|242062832|ref|XP_002452705.1| hypothetical protein SORBIDRAFT_04g031060 [Sorghum bicolor]
 gi|241932536|gb|EES05681.1| hypothetical protein SORBIDRAFT_04g031060 [Sorghum bicolor]
          Length = 459

 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 251 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 297



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 327 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 373



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 403 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 449



 Score =  133 bits (335), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  108 bits (269), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 73/218 (33%), Positives = 123/218 (56%), Gaps = 8/218 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
           +   L   G+QL++ +TLA Y+I++   L ++  ++  
Sbjct: 419 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 456


>gi|195435796|ref|XP_002065865.1| GK20481 [Drosophila willistoni]
 gi|194161950|gb|EDW76851.1| GK20481 [Drosophila willistoni]
          Length = 611

 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 403 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 419 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 478

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 479 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 525



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 319 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 377 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 435

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 436 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 494

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 495 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 554

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 555 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 601



 Score =  133 bits (334), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 74/216 (34%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 395 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 452

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 453 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 511

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 512 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 570

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 571 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 606


>gi|297810399|ref|XP_002873083.1| hypothetical protein ARALYDRAFT_487095 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297318920|gb|EFH49342.1| hypothetical protein ARALYDRAFT_487095 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 306

 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLTDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 251 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 297



 Score =  133 bits (335), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLTDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  109 bits (273), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 74/220 (33%), Positives = 124/220 (56%), Gaps = 8/220 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSIF 216
           +   L   G+QL++ +TLA Y+I++   L ++  ++   F
Sbjct: 267 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGSF 306


>gi|255081913|ref|XP_002508175.1| ubiquitin [Micromonas sp. RCC299]
 gi|303285332|ref|XP_003061956.1| ubiquitin [Micromonas pusilla CCMP1545]
 gi|226456367|gb|EEH53668.1| ubiquitin [Micromonas pusilla CCMP1545]
 gi|226523451|gb|ACO69433.1| ubiquitin [Micromonas sp. RCC299]
          Length = 381

 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 251 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 297



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 327 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 373



 Score =  133 bits (335), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  108 bits (269), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 73/218 (33%), Positives = 123/218 (56%), Gaps = 8/218 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
           +   L   G+QL++ +TLA Y+I++   L ++  ++  
Sbjct: 343 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 380


>gi|16660459|gb|AAL27563.1|AF429429_1 polyubiquitin OUB1 [Olea europaea]
          Length = 305

 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 251 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 297



 Score =  133 bits (335), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  108 bits (270), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 73/219 (33%), Positives = 124/219 (56%), Gaps = 8/219 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSI 215
           +   L   G+QL++ +TLA Y+I++   L ++  ++  +
Sbjct: 267 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGL 305


>gi|18044723|gb|AAH19850.1| Ubiquitin B [Mus musculus]
          Length = 305

 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 167/287 (58%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  ++ + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQHRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQHR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  107 bits (266), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 74/212 (34%), Positives = 121/212 (57%), Gaps = 8/212 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEPSDTIENVKAKIQDK--EGIPPDQHRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQII 208
           +   L   G+QL++ +TL+ Y+I++   L ++
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298


>gi|32564339|ref|NP_741158.2| Protein UBQ-1, isoform c [Caenorhabditis elegans]
 gi|373219553|emb|CCD68780.1| Protein UBQ-1, isoform c [Caenorhabditis elegans]
          Length = 538

 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  160 bits (406), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLIGKTITLEVEASDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 403 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449



 Score =  140 bits (352), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 95/263 (36%), Positives = 150/263 (57%), Gaps = 10/263 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T    T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LSDYNIQKESTLHLVLRLRGGMQIFVKTLIGKTITLEVEASDTIENVKAKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 419 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 478

Query: 235 VRDVKDKLFREIGQAPDSQRLVF 257
           + +VK K+  + G  PD QRL+F
Sbjct: 479 IENVKAKIQDKEGIPPDQQRLIF 501



 Score =  133 bits (334), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score = 94.0 bits (232), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 66/188 (35%), Positives = 102/188 (54%), Gaps = 7/188 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 319 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT    KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 377 LRGGMQIFVKTLIG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 435

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++      P 
Sbjct: 436 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPD 495

Query: 177 EDCELFRG 184
           +   +F G
Sbjct: 496 QQRLIFAG 503


>gi|68160568|gb|AAY86773.1| polyubiquitin [Noccaea caerulescens]
          Length = 382

 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 251 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 297



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 327 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 373



 Score =  133 bits (335), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  109 bits (272), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 74/220 (33%), Positives = 124/220 (56%), Gaps = 8/220 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSIF 216
           +   L   G+QL++ +TLA Y+I++   L ++  ++   F
Sbjct: 343 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGNF 382


>gi|3126967|gb|AAC16012.1| polyubiquitin [Elaeagnus umbellata]
          Length = 458

 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 251 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 297



 Score =  161 bits (408), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 165/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV    T+ +VK  ++  +  IP 
Sbjct: 284 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESLDTIDNVKAQIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 403 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 449



 Score =  133 bits (335), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  106 bits (265), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 73/220 (33%), Positives = 123/220 (55%), Gaps = 8/220 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+    DTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVESLDTIDNVKAQIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSIF 216
           +   L   G+QL++ +TLA Y+I++   L ++  ++   F
Sbjct: 419 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGDF 458


>gi|19698797|gb|AAL91109.1| ubiquitin [Onchocerca volvulus]
          Length = 305

 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  133 bits (334), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 74/216 (34%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 302


>gi|30679302|ref|NP_849292.1| polyubiquitin 14 [Arabidopsis thaliana]
 gi|186511482|ref|NP_001118922.1| polyubiquitin 14 [Arabidopsis thaliana]
 gi|240255760|ref|NP_974516.4| polyubiquitin 10 [Arabidopsis thaliana]
 gi|224115232|ref|XP_002316978.1| predicted protein [Populus trichocarpa]
 gi|297813891|ref|XP_002874829.1| hypothetical protein ARALYDRAFT_490155 [Arabidopsis lyrata subsp.
           lyrata]
 gi|356536051|ref|XP_003536554.1| PREDICTED: polyubiquitin-like isoform 1 [Glycine max]
 gi|356536053|ref|XP_003536555.1| PREDICTED: polyubiquitin-like isoform 2 [Glycine max]
 gi|356536055|ref|XP_003536556.1| PREDICTED: polyubiquitin-like isoform 3 [Glycine max]
 gi|449458219|ref|XP_004146845.1| PREDICTED: polyubiquitin-like [Cucumis sativus]
 gi|449517130|ref|XP_004165599.1| PREDICTED: polyubiquitin-like [Cucumis sativus]
 gi|302393787|sp|P69325.2|UBIQP_SOYBN RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
           Flags: Precursor
 gi|302596002|sp|Q3E7T8.2|UBQ14_ARATH RecName: Full=Polyubiquitin 14; Contains: RecName: Full=Ubiquitin;
           Flags: Precursor
 gi|1076708|pir||S49332 polyubiquitin 4 - common sunflower
 gi|25294250|pir||G85036 polyubiquitin [imported] - Arabidopsis thaliana
 gi|303901|dbj|BAA03764.1| ubiquitin [Glycine max]
 gi|456714|dbj|BAA05670.1| ubiquitin [Glycine max]
 gi|556688|emb|CAA84440.1| seed tetraubiquitin [Helianthus annuus]
 gi|994785|dbj|BAA05085.1| Ubiquitin [Glycine max]
 gi|4263514|gb|AAD15340.1| putative polyubiquitin [Arabidopsis thaliana]
 gi|7269774|emb|CAB77774.1| polyubiquitin [Arabidopsis thaliana]
 gi|21593346|gb|AAM65295.1| polyubiquitin (UBQ14) [Arabidopsis thaliana]
 gi|53850087|emb|CAH59738.1| polyubiquitin [Plantago major]
 gi|222423150|dbj|BAH19554.1| AT4G02890 [Arabidopsis thaliana]
 gi|222860043|gb|EEE97590.1| predicted protein [Populus trichocarpa]
 gi|297320666|gb|EFH51088.1| hypothetical protein ARALYDRAFT_490155 [Arabidopsis lyrata subsp.
           lyrata]
 gi|332656846|gb|AEE82246.1| polyubiquitin 14 [Arabidopsis thaliana]
 gi|332656847|gb|AEE82247.1| polyubiquitin 14 [Arabidopsis thaliana]
 gi|332657103|gb|AEE82503.1| polyubiquitin 10 [Arabidopsis thaliana]
 gi|399513942|gb|AFP43341.1| polyubiquitin [Arabidopsis thaliana]
 gi|1096513|prf||2111434A tetraubiquitin
          Length = 305

 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 251 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 297



 Score =  133 bits (335), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  108 bits (269), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 73/216 (33%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TLA Y+I++   L ++  ++
Sbjct: 267 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 302


>gi|297724233|ref|NP_001174480.1| Os05g0504766 [Oryza sativa Japonica Group]
 gi|242096828|ref|XP_002438904.1| hypothetical protein SORBIDRAFT_10g028020 [Sorghum bicolor]
 gi|4809266|gb|AAD30173.1|AF148448_1 polyubiquitin [Sporobolus stapfianus]
 gi|57863866|gb|AAW56906.1| polyubiquitin [Oryza sativa Japonica Group]
 gi|125552905|gb|EAY98614.1| hypothetical protein OsI_20535 [Oryza sativa Indica Group]
 gi|222632152|gb|EEE64284.1| hypothetical protein OsJ_19121 [Oryza sativa Japonica Group]
 gi|241917127|gb|EER90271.1| hypothetical protein SORBIDRAFT_10g028020 [Sorghum bicolor]
 gi|255676474|dbj|BAH93208.1| Os05g0504766 [Oryza sativa Japonica Group]
 gi|326510917|dbj|BAJ91806.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326521968|dbj|BAK04112.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|383843954|gb|AFH53939.1| polyubiquitin 4 [Brachypodium distachyon]
 gi|383843956|gb|AFH53940.1| polyubiquitin 10 [Brachypodium distachyon]
          Length = 381

 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 251 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 297



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 327 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 373



 Score =  133 bits (335), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  108 bits (269), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 73/216 (33%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TLA Y+I++   L ++  ++
Sbjct: 343 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 378


>gi|375298514|dbj|BAL61084.1| polyubiqutin [Dianthus caryophyllus]
 gi|375298516|dbj|BAL61085.1| polyubiquitin [Dianthus caryophyllus]
 gi|375298518|dbj|BAL61086.1| polyubiquitin [Dianthus caryophyllus]
          Length = 381

 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 251 IDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 297



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 327 IDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 373



 Score =  133 bits (335), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  107 bits (268), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 73/218 (33%), Positives = 123/218 (56%), Gaps = 8/218 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVESSDTIDNVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
           +   L   G+QL++ +TLA Y+I++   L ++  ++  
Sbjct: 343 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 380


>gi|356548680|ref|XP_003542728.1| PREDICTED: polyubiquitin-C-like isoform 1 [Glycine max]
 gi|356548682|ref|XP_003542729.1| PREDICTED: polyubiquitin-C-like isoform 2 [Glycine max]
          Length = 533

 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 327 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 373



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 403 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 449



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 419 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 478

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 479 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 525



 Score =  161 bits (408), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 251 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 297



 Score =  133 bits (335), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  108 bits (269), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 73/218 (33%), Positives = 123/218 (56%), Gaps = 8/218 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 319 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 376

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 377 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 435

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 436 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 494

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
           +   L   G+QL++ +TLA Y+I++   L ++  ++  
Sbjct: 495 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 532


>gi|1332579|emb|CAA66667.1| polyubiquitin [Pinus sylvestris]
          Length = 761

 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 403 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 449



 Score =  162 bits (409), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 395 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 452

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 453 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 511

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 512 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 570

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 571 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 630

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 631 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 677



 Score =  162 bits (409), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVENSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 327 IDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 373



 Score =  162 bits (409), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 419 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 478

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 479 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 525



 Score =  162 bits (409), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVENSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 251 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 297



 Score =  161 bits (408), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 319 LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 376

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 377 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 435

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 436 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 494

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 495 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 554

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 555 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 601



 Score =  159 bits (403), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 165/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 471 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 528

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 529 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 587

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 588 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 646

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L  + I LEV   DT
Sbjct: 647 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTAKTITLEVESSDT 706

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 707 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 753



 Score =  133 bits (335), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVENSDTIDNVKSKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 73/219 (33%), Positives = 125/219 (57%), Gaps = 8/219 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 547 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 604

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 605 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 663

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T+ T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 664 LADYNIQKESTLHLVLRLRGGMQIFVKTLTAKTITLEVESSDTIDNVKAKIQD-KEGIPP 722

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSI 215
           +   L   G+QL++ +TLA Y+I++   L ++  ++  +
Sbjct: 723 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGL 761


>gi|302595949|sp|P0CH04.1|UBI1P_PETCR RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
           Flags: Precursor
 gi|302595950|sp|P0CH05.1|UBI2P_PETCR RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
           Flags: Precursor
 gi|288112|emb|CAA45621.1| polyubiquitin [Petroselinum crispum]
 gi|288114|emb|CAA45622.1| polyubiquitin [Petroselinum crispum]
          Length = 458

 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 251 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 297



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 327 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 373



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 403 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 449



 Score =  133 bits (335), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  109 bits (273), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 74/220 (33%), Positives = 124/220 (56%), Gaps = 8/220 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSIF 216
           +   L   G+QL++ +TLA Y+I++   L ++  ++   F
Sbjct: 419 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGDF 458


>gi|18420267|ref|NP_568397.1| polyubiquitin 4 [Arabidopsis thaliana]
 gi|297826781|ref|XP_002881273.1| hypothetical protein ARALYDRAFT_482268 [Arabidopsis lyrata subsp.
           lyrata]
 gi|302595977|sp|P0CH32.1|UBQ4_ARATH RecName: Full=Polyubiquitin 4; Contains: RecName: Full=Ubiquitin;
           Flags: Precursor
 gi|17678|emb|CAA31331.1| unnamed protein product [Arabidopsis thaliana]
 gi|987519|gb|AAB53929.1| polyubiquitin [Arabidopsis thaliana]
 gi|297327112|gb|EFH57532.1| hypothetical protein ARALYDRAFT_482268 [Arabidopsis lyrata subsp.
           lyrata]
 gi|332005484|gb|AED92867.1| polyubiquitin 4 [Arabidopsis thaliana]
 gi|226499|prf||1515347A poly-ubiquitin
          Length = 382

 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 251 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 297



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 327 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 373



 Score =  133 bits (335), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  110 bits (274), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 74/220 (33%), Positives = 124/220 (56%), Gaps = 8/220 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSIF 216
           +   L   G+QL++ +TLA Y+I++   L ++  ++   F
Sbjct: 343 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGSF 382


>gi|324509924|gb|ADY44155.1| Polyubiquitin-A, partial [Ascaris suum]
          Length = 626

 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 32  LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 89

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 90  LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 148

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 149 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 207

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 208 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 267

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 268 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 314



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 108 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 165

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 166 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 224

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 225 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 283

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 284 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 343

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 344 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 390



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 184 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 241

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 242 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 300

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 301 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 359

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 360 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 419

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 420 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 466



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 260 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 317

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 318 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 376

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 377 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 435

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 436 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 495

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 496 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 542



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 336 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 393

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 394 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 452

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 453 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 511

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 512 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 571

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 572 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 618



 Score =  133 bits (334), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 18  MQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 76

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 77  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPPDQQR 135

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 136 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENV 195

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 196 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 238



 Score =  108 bits (270), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 74/218 (33%), Positives = 123/218 (56%), Gaps = 8/218 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 412 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 469

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 470 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 528

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 529 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 587

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  
Sbjct: 588 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 625



 Score = 63.5 bits (153), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 33/71 (46%), Positives = 44/71 (61%)

Query: 211 VKHSIFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLAS 270
           +   IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+F  +QLED R L+ 
Sbjct: 16  ISMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 75

Query: 271 YKIVNESIVNL 281
           Y I  ES ++L
Sbjct: 76  YNIQKESTLHL 86


>gi|308497342|ref|XP_003110858.1| CRE-UBQ-1 protein [Caenorhabditis remanei]
 gi|308242738|gb|EFO86690.1| CRE-UBQ-1 protein [Caenorhabditis remanei]
          Length = 920

 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 403 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 419 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 478

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 479 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 525



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 629 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 686

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 687 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 745

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 746 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 804

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 805 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 864

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 865 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 911



 Score =  157 bits (396), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 106/292 (36%), Positives = 165/292 (56%), Gaps = 14/292 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 395 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 452

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 453 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 511

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++      P 
Sbjct: 512 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPD 571

Query: 177 EDCELFRGG-----EQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEV 229
           +   +F G      +QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV
Sbjct: 572 QQRLIFAGKNNCERKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEV 631

Query: 230 AKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
              DT+ +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 632 EASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 683



 Score =  155 bits (393), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 107/293 (36%), Positives = 166/293 (56%), Gaps = 16/293 (5%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 471 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 528

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGK------L 111
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK       
Sbjct: 529 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKNNCERKQ 587

Query: 112 IESYITLDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESM 170
           +E   TL   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  
Sbjct: 588 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD- 646

Query: 171 RICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILE 228
           +  IP +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LE
Sbjct: 647 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 706

Query: 229 VAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           V   DT+ +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 707 VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 759



 Score =  155 bits (393), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 107/293 (36%), Positives = 166/293 (56%), Gaps = 16/293 (5%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQ------QLENGLTVIDYGIPNNSV 54
           ++V+ ++ IE +K +I  K  E I  D   L +AG+      QLE+G T+ DY I   S 
Sbjct: 547 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKNNCERKQLEDGRTLSDYNIQKEST 604

Query: 55  IH---NDSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKL 111
           +H      G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK 
Sbjct: 605 LHLVLRLRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQ 663

Query: 112 IESYITLDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESM 170
           +E   TL   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  
Sbjct: 664 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD- 722

Query: 171 RICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILE 228
           +  IP +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LE
Sbjct: 723 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 782

Query: 229 VAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           V   DT+ +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 783 VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 835



 Score =  133 bits (334), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  108 bits (270), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 74/216 (34%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 705 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 762

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 763 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 821

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 822 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 880

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 881 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 916


>gi|225465609|ref|XP_002266370.1| PREDICTED: polyubiquitin 4-like [Vitis vinifera]
          Length = 383

 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 251 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 297



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 327 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 373



 Score =  133 bits (335), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  108 bits (269), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 73/218 (33%), Positives = 123/218 (56%), Gaps = 8/218 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
           +   L   G+QL++ +TLA Y+I++   L ++  ++  
Sbjct: 343 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 380


>gi|30679945|ref|NP_851029.1| polyubiquitin 3 [Arabidopsis thaliana]
 gi|30679951|ref|NP_568112.2| polyubiquitin 3 [Arabidopsis thaliana]
 gi|79326803|ref|NP_001031824.1| polyubiquitin 3 [Arabidopsis thaliana]
 gi|122237441|sp|Q1EC66.1|UBQ3_ARATH RecName: Full=Polyubiquitin 3; Contains: RecName: Full=Ubiquitin;
           Flags: Precursor
 gi|7413601|emb|CAB86091.1| polyubiquitin (ubq3) [Arabidopsis thaliana]
 gi|9757775|dbj|BAB08384.1| polyubiquitin [Arabidopsis thaliana]
 gi|27311629|gb|AAO00780.1| polyubiquitin (UBQ3) [Arabidopsis thaliana]
 gi|108385299|gb|ABF85770.1| At5g03240 [Arabidopsis thaliana]
 gi|222423646|dbj|BAH19791.1| AT5G03240 [Arabidopsis thaliana]
 gi|332003191|gb|AED90574.1| polyubiquitin 3 [Arabidopsis thaliana]
 gi|332003192|gb|AED90575.1| polyubiquitin 3 [Arabidopsis thaliana]
 gi|332003193|gb|AED90576.1| polyubiquitin 3 [Arabidopsis thaliana]
          Length = 306

 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 251 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 297



 Score =  133 bits (335), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  110 bits (274), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 74/220 (33%), Positives = 124/220 (56%), Gaps = 8/220 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSIF 216
           +   L   G+QL++ +TLA Y+I++   L ++  ++   F
Sbjct: 267 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGSF 306


>gi|145352566|ref|XP_001420612.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144580847|gb|ABO98905.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 381

 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 251 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 297



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 327 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 373



 Score =  133 bits (335), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  107 bits (268), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 73/218 (33%), Positives = 123/218 (56%), Gaps = 8/218 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
           +   L   G+QL++ +TLA Y+I++   L ++  ++  
Sbjct: 343 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 380


>gi|116312012|emb|CAJ86369.1| OSIGBa0117N13.13 [Oryza sativa Indica Group]
 gi|116312055|emb|CAJ86419.1| H0303G06.8 [Oryza sativa Indica Group]
 gi|125549841|gb|EAY95663.1| hypothetical protein OsI_17529 [Oryza sativa Indica Group]
          Length = 381

 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 251 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 297



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 327 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 373



 Score =  133 bits (335), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  108 bits (270), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 73/219 (33%), Positives = 124/219 (56%), Gaps = 8/219 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSI 215
           +   L   G+QL++ +TLA Y+I++   L ++  ++  +
Sbjct: 343 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGL 381


>gi|312160|emb|CAA51679.1| ubiquitin [Solanum lycopersicum]
          Length = 534

 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 419 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 478

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 479 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 525



 Score =  162 bits (409), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTR-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 403 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 449



 Score =  161 bits (408), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPT-STVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LADYNIQKESTLHLVLRLRGGMQIFVKTLTRKTITLEVESSDTIDNVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 327 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 373



 Score =  158 bits (400), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 165/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L  + I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTRKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 251 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 297



 Score =  133 bits (335), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  108 bits (269), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 73/216 (33%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 319 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 376

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 377 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 435

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 436 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 494

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TLA Y+I++   L ++  ++
Sbjct: 495 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 530


>gi|7267292|emb|CAB81074.1| polyubiquitin (ubq10) [Arabidopsis thaliana]
          Length = 464

 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 251 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 297



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 327 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 373



 Score =  133 bits (334), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  129 bits (323), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 88/248 (35%), Positives = 142/248 (57%), Gaps = 10/248 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 402

Query: 235 VRDVKDKL 242
           + +VK K+
Sbjct: 403 IDNVKAKI 410



 Score = 90.5 bits (223), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 61/172 (35%), Positives = 98/172 (56%), Gaps = 7/172 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVE 168
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++
Sbjct: 360 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 411


>gi|18803|emb|CAA40323.1| polyubiquitin protein [Helianthus annuus]
          Length = 334

 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 251 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 297



 Score =  133 bits (335), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  129 bits (323), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 88/248 (35%), Positives = 142/248 (57%), Gaps = 10/248 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 326

Query: 235 VRDVKDKL 242
           + +VK K+
Sbjct: 327 IDNVKAKI 334


>gi|53850091|emb|CAH59740.1| polyubiquitin [Plantago major]
          Length = 305

 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 251 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 297



 Score =  133 bits (335), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  107 bits (268), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 73/218 (33%), Positives = 123/218 (56%), Gaps = 8/218 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
           +   L   G+QL++ +TLA Y+I++   L ++  ++  
Sbjct: 267 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 304


>gi|242055399|ref|XP_002456845.1| hypothetical protein SORBIDRAFT_03g043940 [Sorghum bicolor]
 gi|242064116|ref|XP_002453347.1| hypothetical protein SORBIDRAFT_04g004280 [Sorghum bicolor]
 gi|357148716|ref|XP_003574869.1| PREDICTED: polyubiquitin-like isoform 1 [Brachypodium distachyon]
 gi|357148721|ref|XP_003574870.1| PREDICTED: polyubiquitin-like isoform 2 [Brachypodium distachyon]
 gi|357148724|ref|XP_003574871.1| PREDICTED: polyubiquitin-like isoform 3 [Brachypodium distachyon]
 gi|302393780|sp|P69309.2|UBIQP_AVEFA RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
           Flags: Precursor
 gi|320608|pir||S28426 polyubiquitin 4 - wild oat
 gi|15989|emb|CAA49200.1| tetraubiquitin [Avena fatua]
 gi|777758|gb|AAC37466.1| polyubiquitin [Saccharum hybrid cultivar H65-7052]
 gi|25044841|gb|AAM28291.1| tetrameric ubiquitin [Ananas comosus]
 gi|241928820|gb|EES01965.1| hypothetical protein SORBIDRAFT_03g043940 [Sorghum bicolor]
 gi|241933178|gb|EES06323.1| hypothetical protein SORBIDRAFT_04g004280 [Sorghum bicolor]
 gi|332379896|gb|AEE65379.1| ubiquitin 1 [Panicum virgatum]
 gi|451854822|gb|EMD68114.1| hypothetical protein COCSADRAFT_108224 [Cochliobolus sativus
           ND90Pr]
 gi|452000986|gb|EMD93446.1| hypothetical protein COCHEDRAFT_1202381 [Cochliobolus
           heterostrophus C5]
          Length = 305

 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 251 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 297



 Score =  133 bits (335), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  107 bits (268), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 73/216 (33%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TLA Y+I++   L ++  ++
Sbjct: 267 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 302


>gi|350420431|ref|XP_003492506.1| PREDICTED: polyubiquitin-like [Bombus impatiens]
          Length = 471

 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  158 bits (400), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 107/297 (36%), Positives = 166/297 (55%), Gaps = 20/297 (6%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS------------IFVKLLNGRY 224
           +   L   G+QL++ +TL+ Y+I++   L ++  ++              IFVK L G+ 
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGSHLVLRLRGGMQIFVKTLTGKT 402

Query: 225 IILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           I LEV   DT+ +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 403 ITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 459



 Score =  133 bits (334), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  100 bits (250), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 74/222 (33%), Positives = 121/222 (54%), Gaps = 18/222 (8%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQ----------EIFVQTPTS-TVKLEVRRAHTVLDVKKM 166
           L   NI  E TL ++   +             +IFV+T T  T+ LEV  + T+ +VK  
Sbjct: 360 LSDYNIQKESTLHLVLRLRGGSHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAK 419

Query: 167 VESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQII 208
           ++  +  IP +   L   G+QL++ +TL+ Y+I++   L ++
Sbjct: 420 IQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 460


>gi|324514657|gb|ADY45941.1| Polyubiquitin-A, partial [Ascaris suum]
          Length = 474

 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  145 bits (366), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 102/287 (35%), Positives = 160/287 (55%), Gaps = 17/287 (5%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F          L+ Y I  ES ++L
Sbjct: 403 IENVKAKIQDKEGIPPDQQRLIFA-------GTLSDYNIQKESTLHL 442



 Score =  133 bits (334), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 83/243 (34%), Positives = 131/243 (53%), Gaps = 17/243 (6%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++      P 
Sbjct: 360 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPD 419

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   +F G        TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 420 QQRLIFAG--------TLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 471

Query: 235 VRD 237
           + +
Sbjct: 472 IEN 474


>gi|168050741|ref|XP_001777816.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162670792|gb|EDQ57354.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 381

 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 251 IDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 297



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 327 IDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 373



 Score =  133 bits (335), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  107 bits (268), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 73/216 (33%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVESSDTIDNVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TLA Y+I++   L ++  ++
Sbjct: 343 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 378


>gi|74024980|ref|XP_829056.1| polyubiquitin [Trypanosoma brucei brucei strain 927/4 GUTat10.1]
 gi|70834442|gb|EAN79944.1| polyubiquitin, putative [Trypanosoma brucei brucei strain 927/4
           GUTat10.1]
          Length = 685

 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 108/287 (37%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE G T+ DY I   S +H    
Sbjct: 15  LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL+  +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEEGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLE+ R LA Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLHL 297



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 108/287 (37%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE G T+ DY I   S +H    
Sbjct: 91  LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL+  +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEEGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLE+ R LA Y I  ES ++L
Sbjct: 327 IENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLHL 373



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 108/287 (37%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE G T+ DY I   S +H    
Sbjct: 167 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL+  +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEEGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLE+ R LA Y I  ES ++L
Sbjct: 403 IENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLHL 449



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 108/287 (37%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE G T+ DY I   S +H    
Sbjct: 243 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL+  +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 419 DQQRLIFAGKQLEEGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDT 478

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLE+ R LA Y I  ES ++L
Sbjct: 479 IENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLHL 525



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 108/287 (37%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE G T+ DY I   S +H    
Sbjct: 319 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLHLVLR 376

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 377 LRGGMQIFVKTLTG-KTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRT 435

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 436 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAKIQD-KEGIPP 494

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL+  +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 495 DQQRLIFAGKQLEEGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDT 554

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLE+ R LA Y I  ES ++L
Sbjct: 555 IENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLHL 601



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 108/287 (37%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE G T+ DY I   S +H    
Sbjct: 395 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLHLVLR 452

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 453 LRGGMQIFVKTLTG-KTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRT 511

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 512 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAKIQD-KEGIPP 570

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL+  +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 571 DQQRLIFAGKQLEEGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDT 630

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLE+ R LA Y I  ES ++L
Sbjct: 631 IENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLHL 677



 Score =  133 bits (334), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 130/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL+  +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEEGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLE+ R LA Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLHL 221



 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 75/218 (34%), Positives = 121/218 (55%), Gaps = 8/218 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE G T+ DY I   S +H    
Sbjct: 471 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLHLVLR 528

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 529 LRGGMQIFVKTLTG-KTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRT 587

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 588 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAKIQD-KEGIPP 646

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
           +   L   G+QL+  +TLA Y+I++   L ++  ++  
Sbjct: 647 DQQRLIFAGKQLEEGRTLADYNIQKESTLHLVLRLRGG 684


>gi|356537527|ref|XP_003537278.1| PREDICTED: polyubiquitin 3-like [Glycine max]
          Length = 306

 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 251 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 297



 Score =  133 bits (335), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  109 bits (273), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 74/220 (33%), Positives = 124/220 (56%), Gaps = 8/220 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSIF 216
           +   L   G+QL++ +TLA Y+I++   L ++  ++   F
Sbjct: 267 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGDF 306


>gi|302822499|ref|XP_002992907.1| hypothetical protein SELMODRAFT_162680 [Selaginella moellendorffii]
 gi|302825882|ref|XP_002994512.1| hypothetical protein SELMODRAFT_163447 [Selaginella moellendorffii]
 gi|300137503|gb|EFJ04420.1| hypothetical protein SELMODRAFT_163447 [Selaginella moellendorffii]
 gi|300139252|gb|EFJ05996.1| hypothetical protein SELMODRAFT_162680 [Selaginella moellendorffii]
          Length = 382

 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 251 IDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 297



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 327 IDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 373



 Score =  133 bits (335), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  107 bits (267), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 73/216 (33%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVESSDTIDNVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TLA Y+I++   L ++  ++
Sbjct: 343 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 378


>gi|224065086|ref|XP_002301663.1| predicted protein [Populus trichocarpa]
 gi|222843389|gb|EEE80936.1| predicted protein [Populus trichocarpa]
          Length = 305

 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKTKIQDK--EGIPPDQQRLIFAGKQLEDGSTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 251 IDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 297



 Score =  134 bits (336), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGSTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  107 bits (267), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 73/216 (33%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TLA Y+I++   L ++  ++
Sbjct: 267 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 302


>gi|302596001|sp|Q58G87.2|UBQ3_ORYSJ RecName: Full=Polyubiquitin 3; Contains: RecName:
           Full=Ubiquitin-related; Contains: RecName:
           Full=Ubiquitin; Flags: Precursor
 gi|39546234|emb|CAE04243.3| OSJNBa0089N06.4 [Oryza sativa Japonica Group]
 gi|125591721|gb|EAZ32071.1| hypothetical protein OsJ_16259 [Oryza sativa Japonica Group]
          Length = 381

 Score =  162 bits (409), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 327 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 373



 Score =  160 bits (406), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEFSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 251 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 297



 Score =  132 bits (332), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEFSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  108 bits (270), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 73/219 (33%), Positives = 124/219 (56%), Gaps = 8/219 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSI 215
           +   L   G+QL++ +TLA Y+I++   L ++  ++  +
Sbjct: 343 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGL 381


>gi|307172602|gb|EFN63961.1| Ubiquitin [Camponotus floridanus]
          Length = 459

 Score =  162 bits (409), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  162 bits (409), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  162 bits (409), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 403 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449



 Score =  133 bits (334), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  108 bits (270), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 74/216 (34%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 419 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 454


>gi|302762631|ref|XP_002964737.1| hypothetical protein SELMODRAFT_270468 [Selaginella moellendorffii]
 gi|300166970|gb|EFJ33575.1| hypothetical protein SELMODRAFT_270468 [Selaginella moellendorffii]
          Length = 535

 Score =  162 bits (409), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 251 IDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 297



 Score =  162 bits (409), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 327 IDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 373



 Score =  162 bits (409), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVESSDTIDNVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 403 IDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 449



 Score =  162 bits (409), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVESSDTIDNVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 419 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 478

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 479 IDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 525



 Score =  133 bits (335), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  108 bits (270), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 73/221 (33%), Positives = 124/221 (56%), Gaps = 8/221 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 319 LEVESSDTIDNVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 376

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 377 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 435

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 436 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQD-KEGIPP 494

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSIFV 217
           +   L   G+QL++ +TLA Y+I++   L ++  ++  +  
Sbjct: 495 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMLA 535


>gi|297841025|ref|XP_002888394.1| hexaubiquitin protein [Arabidopsis lyrata subsp. lyrata]
 gi|297334235|gb|EFH64653.1| hexaubiquitin protein [Arabidopsis lyrata subsp. lyrata]
          Length = 483

 Score =  162 bits (409), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 251 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 297



 Score =  162 bits (409), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 327 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 373



 Score =  162 bits (409), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 403 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 449



 Score =  133 bits (335), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  107 bits (268), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 73/218 (33%), Positives = 123/218 (56%), Gaps = 8/218 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
           +   L   G+QL++ +TLA Y+I++   L ++  ++  
Sbjct: 419 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 456


>gi|1684855|gb|AAB36545.1| ubiquitin-like protein [Phaseolus vulgaris]
          Length = 407

 Score =  162 bits (409), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 117 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 174

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 175 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 233

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 234 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 292

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 293 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 352

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 353 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 399



 Score =  148 bits (373), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 96/252 (38%), Positives = 146/252 (57%), Gaps = 8/252 (3%)

Query: 36  QQLENGLTVIDYGIPNNSVIH---NDSGVMKLYFKTPSNEKTFELKANRSDTIENIKFII 92
           +QLE+G T+ DY I   S +H      G M+++ KT +  KT  L+   SDTI+N+K  I
Sbjct: 74  KQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKI 132

Query: 93  EVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVK 151
           + +EGIP  +  + + GK +E   TL   NI  E TL ++   +   +IFV+T T  T+ 
Sbjct: 133 QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIT 192

Query: 152 LEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHV 211
           LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TLA Y+I++   L ++  +
Sbjct: 193 LEVESSDTIDNVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL 251

Query: 212 KHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLA 269
           +    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+F  +QLED R LA
Sbjct: 252 RGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLA 311

Query: 270 SYKIVNESIVNL 281
            Y I  ES ++L
Sbjct: 312 DYNIQKESTLHL 323



 Score =  108 bits (269), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 73/212 (34%), Positives = 121/212 (57%), Gaps = 8/212 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 193 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 250

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 251 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 309

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 310 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 368

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQII 208
           +   L   G+QL++ +TLA Y+I++   L ++
Sbjct: 369 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 400



 Score =  104 bits (260), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 72/202 (35%), Positives = 110/202 (54%), Gaps = 11/202 (5%)

Query: 90  FIIEVREGIPVHEYDIYYG-------GKLIESYITLDVLNINNEDTLQMISVPKELQEIF 142
           F+  + EG+     D+  G        K +E   TL   NI  E TL ++   +   +IF
Sbjct: 47  FVSHMVEGVDARLLDVQKGHKGAQCFAKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIF 106

Query: 143 VQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKE 201
           V+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TLA Y+I++
Sbjct: 107 VKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 165

Query: 202 NEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKR 259
              L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+F  
Sbjct: 166 ESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAG 225

Query: 260 QQLEDDRNLASYKIVNESIVNL 281
           +QLED R LA Y I  ES ++L
Sbjct: 226 KQLEDGRTLADYNIQKESTLHL 247


>gi|302789426|ref|XP_002976481.1| hypothetical protein SELMODRAFT_271198 [Selaginella moellendorffii]
 gi|302803592|ref|XP_002983549.1| hypothetical protein SELMODRAFT_228943 [Selaginella moellendorffii]
 gi|300148792|gb|EFJ15450.1| hypothetical protein SELMODRAFT_228943 [Selaginella moellendorffii]
 gi|300155519|gb|EFJ22150.1| hypothetical protein SELMODRAFT_271198 [Selaginella moellendorffii]
          Length = 381

 Score =  162 bits (409), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 327 IDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 373



 Score =  160 bits (406), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 165/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 251 IDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 297



 Score =  133 bits (334), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEEGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  107 bits (267), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 73/216 (33%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVESSDTIDNVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TLA Y+I++   L ++  ++
Sbjct: 343 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 378


>gi|224286458|gb|ACN40936.1| unknown [Picea sitchensis]
          Length = 458

 Score =  162 bits (409), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 327 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 373



 Score =  162 bits (409), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 403 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 449



 Score =  162 bits (409), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 251 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 297



 Score =  133 bits (335), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  109 bits (272), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 74/220 (33%), Positives = 124/220 (56%), Gaps = 8/220 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSIF 216
           +   L   G+QL++ +TLA Y+I++   L ++  ++   F
Sbjct: 419 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGDF 458


>gi|168016982|ref|XP_001761027.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162687713|gb|EDQ74094.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 533

 Score =  162 bits (409), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 251 IDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 297



 Score =  162 bits (409), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 327 IDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 373



 Score =  162 bits (409), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVESSDTIDNVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 403 IDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 449



 Score =  162 bits (409), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVESSDTIDNVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 419 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 478

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 479 IDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 525



 Score =  133 bits (335), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  107 bits (267), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 73/216 (33%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 319 LEVESSDTIDNVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 376

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 377 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 435

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 436 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQD-KEGIPP 494

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TLA Y+I++   L ++  ++
Sbjct: 495 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 530


>gi|356565543|ref|XP_003550999.1| PREDICTED: polyubiquitin-C-like [Glycine max]
          Length = 533

 Score =  162 bits (409), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 251 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 297



 Score =  162 bits (409), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 327 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 373



 Score =  158 bits (400), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 165/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + ++ +VK  +E  +  IP 
Sbjct: 360 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDSIENVKAKIEE-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL  Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 419 DQQRLIFAGKQLEDGRTLEDYEIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDT 478

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED+R L  Y I  ES ++L
Sbjct: 479 IENVKAKIQEKEGIPPDQQRLIFAGKQLEDERTLEDYDIQKESTLHL 525



 Score =  133 bits (335), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  106 bits (265), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 73/216 (33%), Positives = 122/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 319 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 376

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SD+IEN+K  IE +EGIP  +  + + GK +E   T
Sbjct: 377 LRGGMQIFVKTLTG-KTITLEVESSDSIENVKAKIEEKEGIPPDQQRLIFAGKQLEDGRT 435

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L+   I  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 436 LEDYEIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDTIENVKAKIQE-KEGIPP 494

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL  YDI++   L ++  ++
Sbjct: 495 DQQRLIFAGKQLEDERTLEDYDIQKESTLHLVLRLR 530


>gi|356519611|ref|XP_003528465.1| PREDICTED: LOW QUALITY PROTEIN: polyubiquitin-like [Glycine max]
          Length = 776

 Score =  162 bits (409), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 251 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 297



 Score =  162 bits (409), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 327 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 373



 Score =  162 bits (409), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 403 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 449



 Score =  162 bits (409), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 419 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 478

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 479 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 525



 Score =  142 bits (357), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 103/284 (36%), Positives = 156/284 (54%), Gaps = 14/284 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 395 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 452

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 453 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 511

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV   +    VK  V+  +  IP 
Sbjct: 512 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESXN----VKAKVQD-KEGIPP 566

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHV--KHSIFVKLLNGRYIILEVAKFDT 234
           +   L   G+QLQ+ +TLA Y+I +   L ++  +     IFVK L G+ I LEV   DT
Sbjct: 567 DQQRLIFAGKQLQDGRTLADYNILKXSTLHLVLRLCGGMQIFVKTLIGKTITLEVESSDT 626

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESI 278
           + +VK K+  +    PD QRL+F  +QLED   LA Y I   ++
Sbjct: 627 IDNVKAKIQDKESIPPDQQRLIFAGKQLEDGLTLADYNIXESTL 670



 Score =  133 bits (335), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  128 bits (321), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 97/286 (33%), Positives = 155/286 (54%), Gaps = 13/286 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 471 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 528

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+        N+K  ++ +EGIP  +  + + GK ++   T
Sbjct: 529 LRGGMQIFVKTLTG-KTITLEVESX----NVKAKVQDKEGIPPDQQRLIFAGKQLQDGRT 583

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI    TL ++       +IFV+T    T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 584 LADYNILKXSTLHLVLRLCGGMQIFVKTLIGKTITLEVESSDTIDNVKAKIQD-KESIPP 642

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIR-HVKHSIFVKLLNGRYIILEVAKFDTV 235
           +   L   G+QL++  TLA Y+I E+ +  ++R      IFVK L G+ + LEV   DT+
Sbjct: 643 DQQRLIFAGKQLEDGLTLADYNIXESTLHLVLRLRGGMQIFVKTLIGKSVTLEVESSDTI 702

Query: 236 RDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
            +VK K   + G  PD +RL+F  +QLED R LA   I+ ES ++L
Sbjct: 703 DNVKAKFQDKEGILPDQRRLIFAGKQLEDGRTLADXNILKESTLHL 748



 Score = 87.4 bits (215), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 72/229 (31%), Positives = 120/229 (52%), Gaps = 10/229 (4%)

Query: 5   KTEKIEKLKLRIHAKVE--EEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---NDS 59
           KT  +E     + AKV+  E I  D   L +AG+QL++G T+ DY I   S +H      
Sbjct: 543 KTITLEVESXNVKAKVQDKEGIPPDQQRLIFAGKQLQDGRTLADYNILKXSTLHLVLRLC 602

Query: 60  GVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLD 119
           G M+++ KT    KT  L+   SDTI+N+K  I+ +E IP  +  + + GK +E  +TL 
Sbjct: 603 GGMQIFVKTLIG-KTITLEVESSDTIDNVKAKIQDKESIPPDQQRLIFAGKQLEDGLTLA 661

Query: 120 VLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSED 178
             NI  E TL ++   +   +IFV+T    +V LEV  + T+ +VK   +     +P + 
Sbjct: 662 DYNIX-ESTLHLVLRLRGGMQIFVKTLIGKSVTLEVESSDTIDNVKAKFQDKEGILPDQR 720

Query: 179 CELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSI-FVKLLNGRYII 226
             +F  G+QL++ +TLA  +I +   L ++  ++    F +   G Y++
Sbjct: 721 RLIF-AGKQLEDGRTLADXNILKESTLHLVLRLRGGFKFEQWSAGPYLV 768



 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 45/134 (33%), Positives = 76/134 (56%), Gaps = 5/134 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSV--IHND 58
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+GLT+ DY I  +++  +   
Sbjct: 619 LEVESSDTIDNVKAKIQDK--ESIPPDQQRLIFAGKQLEDGLTLADYNIXESTLHLVLRL 676

Query: 59  SGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITL 118
            G M+++ KT    K+  L+   SDTI+N+K   + +EGI   +  + + GK +E   TL
Sbjct: 677 RGGMQIFVKTLIG-KSVTLEVESSDTIDNVKAKFQDKEGILPDQRRLIFAGKQLEDGRTL 735

Query: 119 DVLNINNEDTLQMI 132
              NI  E TL ++
Sbjct: 736 ADXNILKESTLHLV 749


>gi|117558776|gb|AAI27396.1| Zgc:153686 [Danio rerio]
          Length = 533

 Score =  162 bits (409), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLCLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 403 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  160 bits (405), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLC 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 419 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 478

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 479 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 525



 Score =  160 bits (404), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLCLRGGMQIFVKTLTGKTITLEVEPSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  107 bits (267), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 74/218 (33%), Positives = 123/218 (56%), Gaps = 8/218 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 319 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 377 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 435

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 436 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 494

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  
Sbjct: 495 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 532


>gi|302393779|sp|P42740.2|UBIQP_AGLNE RecName: Full=Polyubiquitin; Contains: RecName:
           Full=Ubiquitin-related 1; Contains: RecName:
           Full=Ubiquitin; Contains: RecName:
           Full=Ubiquitin-related 2; Contains: RecName:
           Full=Ubiquitin-related 3; Flags: Precursor
 gi|166336|gb|AAA72126.1| polyubiquitin [Aglaothamnion neglectum]
 gi|445141|prf||1908440A poly-ubiquitin
          Length = 457

 Score =  162 bits (409), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVESSDTIENVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   N+  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNLQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKTKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 403 IENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449



 Score =  162 bits (409), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIENVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTITG-KTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKTKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y++++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNLQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  159 bits (401), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 165/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY     S +H    
Sbjct: 15  LEVESSDTIENVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNNQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTITGKTITLEVESSDTIENVKTKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y +  ES ++L
Sbjct: 251 IENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNLQKESTLHL 297



 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 82/223 (36%), Positives = 130/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           N   E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NNQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKTKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK + G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTITGKTITLEVESSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  108 bits (269), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 73/219 (33%), Positives = 124/219 (56%), Gaps = 8/219 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY +   S +H    
Sbjct: 243 LEVESSDTIENVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNLQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKTKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSI 215
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  +
Sbjct: 419 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 457


>gi|224160432|ref|XP_002338212.1| predicted protein [Populus trichocarpa]
 gi|222871285|gb|EEF08416.1| predicted protein [Populus trichocarpa]
          Length = 377

 Score =  162 bits (409), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 251 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 297



 Score =  162 bits (409), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 327 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 373



 Score =  133 bits (335), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  107 bits (268), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 73/212 (34%), Positives = 121/212 (57%), Gaps = 8/212 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQII 208
           +   L   G+QL++ +TLA Y+I++   L ++
Sbjct: 343 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 374


>gi|2760349|gb|AAB95252.1| ubiquitin [Arabidopsis thaliana]
          Length = 380

 Score =  162 bits (409), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQWLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 251 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 297



 Score =  162 bits (409), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKAKIQDK--EGIPPDQQWLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 327 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYDIQKESTLHL 373



 Score =  133 bits (335), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQW 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  110 bits (274), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 74/218 (33%), Positives = 123/218 (56%), Gaps = 8/218 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
           +   L   G+QL++ +TLA YDI++   L ++  ++  
Sbjct: 343 DQQRLIFAGKQLEDGRTLADYDIQKESTLHLVLRLRGG 380


>gi|342298462|emb|CBY46745.1| polyubiquitin 10 protein [Lepidium appelianum]
          Length = 308

 Score =  162 bits (409), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 18  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 75

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 76  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 134

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 135 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 193

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 194 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 253

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 254 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 300



 Score =  135 bits (339), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 86/225 (38%), Positives = 132/225 (58%), Gaps = 5/225 (2%)

Query: 60  GVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLD 119
           G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL 
Sbjct: 2   GGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLA 60

Query: 120 VLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSED 178
             NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP + 
Sbjct: 61  DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQ 119

Query: 179 CELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVR 236
             L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ 
Sbjct: 120 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 179

Query: 237 DVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 180 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 224



 Score =  107 bits (268), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 73/218 (33%), Positives = 123/218 (56%), Gaps = 8/218 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 94  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 151

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 152 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 210

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 211 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 269

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
           +   L   G+QL++ +TLA Y+I++   L ++  ++  
Sbjct: 270 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 307


>gi|302756493|ref|XP_002961670.1| hypothetical protein SELMODRAFT_227280 [Selaginella moellendorffii]
 gi|300170329|gb|EFJ36930.1| hypothetical protein SELMODRAFT_227280 [Selaginella moellendorffii]
          Length = 687

 Score =  162 bits (409), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 251 IDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 297



 Score =  162 bits (409), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 327 IDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 373



 Score =  162 bits (409), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVESSDTIDNVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 403 IDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 449



 Score =  162 bits (409), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVESSDTIDNVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 419 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 478

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 479 IDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 525



 Score =  162 bits (409), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 319 LEVESSDTIDNVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 376

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 377 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 435

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 436 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQD-KEGIPP 494

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 495 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 554

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 555 IDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 601



 Score =  162 bits (409), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 395 LEVESSDTIDNVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 452

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 453 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 511

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 512 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQD-KEGIPP 570

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 571 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 630

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 631 IDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 677



 Score =  133 bits (335), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  108 bits (270), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 73/221 (33%), Positives = 124/221 (56%), Gaps = 8/221 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 471 LEVESSDTIDNVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 528

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 529 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 587

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 588 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQD-KEGIPP 646

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSIFV 217
           +   L   G+QL++ +TLA Y+I++   L ++  ++  +  
Sbjct: 647 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMLA 687


>gi|302784142|ref|XP_002973843.1| hypothetical protein SELMODRAFT_173723 [Selaginella moellendorffii]
 gi|300158175|gb|EFJ24798.1| hypothetical protein SELMODRAFT_173723 [Selaginella moellendorffii]
          Length = 457

 Score =  162 bits (409), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 327 IDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 373



 Score =  162 bits (409), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVESSDTIDNVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 403 IDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 449



 Score =  160 bits (406), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 165/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 251 IDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 297



 Score =  133 bits (334), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEEGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  107 bits (267), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 73/216 (33%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVESSDTIDNVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TLA Y+I++   L ++  ++
Sbjct: 419 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 454


>gi|114159830|gb|ABI53722.1| polyubiquitin [Pyropia yezoensis]
          Length = 533

 Score =  162 bits (409), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 167/287 (58%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +KL+I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVESSDTIDNVKLKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 419 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 478

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 479 IDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 525



 Score =  160 bits (405), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKLKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 403 IDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449



 Score =  158 bits (400), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKLKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  157 bits (398), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IDNVKLKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 72/219 (32%), Positives = 124/219 (56%), Gaps = 8/219 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 319 LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 377 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 435

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 436 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 494

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSI 215
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  +
Sbjct: 495 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 533


>gi|192910770|gb|ACF06493.1| UBQ4 [Elaeis guineensis]
          Length = 384

 Score =  162 bits (409), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LMGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 327 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 373



 Score =  160 bits (406), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 165/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++       +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLMGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 251 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 297



 Score =  132 bits (332), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 130/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  +     IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLMGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  107 bits (268), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 73/216 (33%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TLA Y+I++   L ++  ++
Sbjct: 343 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 378


>gi|168005217|ref|XP_001755307.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162693435|gb|EDQ79787.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 305

 Score =  162 bits (409), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 251 IDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 297



 Score =  133 bits (335), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  107 bits (267), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 73/216 (33%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TLA Y+I++   L ++  ++
Sbjct: 267 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 302


>gi|302796783|ref|XP_002980153.1| hypothetical protein SELMODRAFT_271419 [Selaginella moellendorffii]
 gi|302820321|ref|XP_002991828.1| hypothetical protein SELMODRAFT_162003 [Selaginella moellendorffii]
 gi|300140366|gb|EFJ07090.1| hypothetical protein SELMODRAFT_162003 [Selaginella moellendorffii]
 gi|300152380|gb|EFJ19023.1| hypothetical protein SELMODRAFT_271419 [Selaginella moellendorffii]
          Length = 306

 Score =  162 bits (409), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 251 IDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 297



 Score =  133 bits (335), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  107 bits (267), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 73/216 (33%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TLA Y+I++   L ++  ++
Sbjct: 267 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 302


>gi|195337251|ref|XP_002035242.1| GM14032 [Drosophila sechellia]
 gi|194128335|gb|EDW50378.1| GM14032 [Drosophila sechellia]
          Length = 915

 Score =  162 bits (409), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 167/287 (58%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 547 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 604

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 605 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 663

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 664 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 722

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 723 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 782

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G +PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 783 IENVKAKIQDKEGISPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 829



 Score =  161 bits (408), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 471 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 528

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 529 LRGGMQIFVKTLTG-KTINLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 587

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 588 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 646

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 647 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 706

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 707 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 753



 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 403 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449



 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 419 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 478

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 479 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 525



 Score =  160 bits (404), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 319 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 377 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 435

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 436 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 494

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 495 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTINLEVEPSDT 554

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 555 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 601



 Score =  159 bits (402), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 165/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 623 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 680

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 681 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 739

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++      P 
Sbjct: 740 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGISPD 799

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   +F  G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 800 QQRLIF-AGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 858

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 859 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 905



 Score =  132 bits (332), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 74/219 (33%), Positives = 123/219 (56%), Gaps = 8/219 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 699 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 756

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGI   +  + + GK +E   T
Sbjct: 757 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGISPDQQRLIFAGKQLEDGRT 815

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 816 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 874

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSI 215
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  I
Sbjct: 875 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGI 913


>gi|312080345|ref|XP_003142560.1| ubiquitin C II [Loa loa]
 gi|393912431|gb|EJD76735.1| polyubiquitin [Loa loa]
          Length = 398

 Score =  162 bits (409), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 32  LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 89

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 90  LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 148

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 149 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 207

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 208 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 267

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 268 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 314



 Score =  162 bits (409), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 108 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 165

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 166 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 224

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 225 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 283

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 284 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 343

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 344 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 390



 Score =  133 bits (335), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 87/232 (37%), Positives = 135/232 (58%), Gaps = 9/232 (3%)

Query: 53  SVIHNDSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLI 112
           S+I N    M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +
Sbjct: 13  SIITN----MQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL 67

Query: 113 ESYITLDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMR 171
           E   TL   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +
Sbjct: 68  EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-K 126

Query: 172 ICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEV 229
             IP +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV
Sbjct: 127 EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEV 186

Query: 230 AKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
              DT+ +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 187 EASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 238



 Score =  108 bits (270), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 74/216 (34%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 184 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 241

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 242 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 300

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 301 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 359

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 360 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 395


>gi|168043709|ref|XP_001774326.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162674318|gb|EDQ60828.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 457

 Score =  162 bits (409), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 251 IDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 297



 Score =  162 bits (409), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 327 IDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 373



 Score =  162 bits (409), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVESSDTIDNVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 403 IDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 449



 Score =  133 bits (335), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  108 bits (269), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 73/219 (33%), Positives = 124/219 (56%), Gaps = 8/219 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVESSDTIDNVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSI 215
           +   L   G+QL++ +TLA Y+I++   L ++  ++  +
Sbjct: 419 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGL 457


>gi|170584490|ref|XP_001897032.1| polyubiquitin precursor [Brugia malayi]
 gi|158595567|gb|EDP34110.1| polyubiquitin precursor, putative [Brugia malayi]
          Length = 391

 Score =  162 bits (409), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 101 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 158

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 159 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 217

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 218 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 276

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 277 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 336

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 337 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 383



 Score =  132 bits (332), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 87  MQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 145

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 146 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPPDQQR 204

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 205 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENV 264

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 265 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 307



 Score =  108 bits (270), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 74/218 (33%), Positives = 123/218 (56%), Gaps = 8/218 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 177 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 234

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 235 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 293

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 294 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 352

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  
Sbjct: 353 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 390



 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 37/89 (41%), Positives = 53/89 (59%)

Query: 193 TLAYYDIKENEVLQIIRHVKHSIFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDS 252
           T+ ++   +  +LQ +  V   IFVK L G+ I LEV   DT+ +VK K+  + G  PD 
Sbjct: 67  TVFWFLESKANLLQCVILVNMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQ 126

Query: 253 QRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 127 QRLIFAGKQLEDGRTLSDYNIQKESTLHL 155


>gi|426247174|ref|XP_004017361.1| PREDICTED: polyubiquitin-C-like isoform 1 [Ovis aries]
          Length = 462

 Score =  162 bits (409), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 167/287 (58%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K++I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKVKIQEK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 403 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449



 Score =  132 bits (332), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKVKIQEKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 74/220 (33%), Positives = 124/220 (56%), Gaps = 8/220 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSIF 216
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  + 
Sbjct: 419 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGVL 458


>gi|342186084|emb|CCC95569.1| unnamed protein product [Trypanosoma congolense IL3000]
          Length = 961

 Score =  162 bits (409), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 108/287 (37%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE G T+ DY I   S +H    
Sbjct: 15  LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL+  +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEEGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLE+ R LA Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLHL 297



 Score =  162 bits (409), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 108/287 (37%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE G T+ DY I   S +H    
Sbjct: 91  LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL+  +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEEGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLE+ R LA Y I  ES ++L
Sbjct: 327 IENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLHL 373



 Score =  162 bits (409), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 108/287 (37%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE G T+ DY I   S +H    
Sbjct: 167 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL+  +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEEGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLE+ R LA Y I  ES ++L
Sbjct: 403 IENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLHL 449



 Score =  162 bits (409), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 108/287 (37%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE G T+ DY I   S +H    
Sbjct: 243 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL+  +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 419 DQQRLIFAGKQLEEGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDT 478

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLE+ R LA Y I  ES ++L
Sbjct: 479 IENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLHL 525



 Score =  162 bits (409), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 108/287 (37%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE G T+ DY I   S +H    
Sbjct: 319 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLHLVLR 376

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 377 LRGGMQIFVKTLTG-KTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRT 435

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 436 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAKIQD-KEGIPP 494

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL+  +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 495 DQQRLIFAGKQLEEGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDT 554

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLE+ R LA Y I  ES ++L
Sbjct: 555 IENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLHL 601



 Score =  162 bits (409), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 108/287 (37%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE G T+ DY I   S +H    
Sbjct: 395 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLHLVLR 452

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 453 LRGGMQIFVKTLTG-KTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRT 511

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 512 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAKIQD-KEGIPP 570

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL+  +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 571 DQQRLIFAGKQLEEGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDT 630

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLE+ R LA Y I  ES ++L
Sbjct: 631 IENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLHL 677



 Score =  162 bits (409), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 108/287 (37%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE G T+ DY I   S +H    
Sbjct: 471 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLHLVLR 528

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 529 LRGGMQIFVKTLTG-KTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRT 587

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 588 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAKIQD-KEGIPP 646

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL+  +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 647 DQQRLIFAGKQLEEGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDT 706

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLE+ R LA Y I  ES ++L
Sbjct: 707 IENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLHL 753



 Score =  162 bits (409), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 108/287 (37%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE G T+ DY I   S +H    
Sbjct: 547 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLHLVLR 604

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 605 LRGGMQIFVKTLTG-KTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRT 663

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 664 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAKIQD-KEGIPP 722

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL+  +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 723 DQQRLIFAGKQLEEGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDT 782

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLE+ R LA Y I  ES ++L
Sbjct: 783 IENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLHL 829



 Score =  162 bits (409), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 108/287 (37%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE G T+ DY I   S +H    
Sbjct: 623 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLHLVLR 680

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 681 LRGGMQIFVKTLTG-KTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRT 739

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 740 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAKIQD-KEGIPP 798

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL+  +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 799 DQQRLIFAGKQLEEGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDT 858

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLE+ R LA Y I  ES ++L
Sbjct: 859 IENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLHL 905



 Score =  138 bits (347), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 98/266 (36%), Positives = 149/266 (56%), Gaps = 11/266 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE G T+ DY I   S +H    
Sbjct: 699 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLHLVLR 756

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 757 LRGGMQIFVKTLTG-KTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRT 815

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 816 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAKIQD-KEGIPP 874

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL+  +TLA Y+I++   L ++  ++    IFVK L GR    E    DT
Sbjct: 875 DQQRLIFAGKQLEEGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLPGRPC-FEGEASDT 933

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQ 260
           +R+VK K+  + G  PD QRL+F RQ
Sbjct: 934 MRNVKAKIQDKEGIPPDQQRLIFCRQ 959



 Score =  133 bits (334), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 130/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL+  +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEEGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLE+ R LA Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLHL 221


>gi|393912430|gb|EJD76734.1| polyubiquitin, variant 2 [Loa loa]
          Length = 322

 Score =  162 bits (409), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 32  LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 89

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 90  LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 148

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 149 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 207

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 208 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 267

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 268 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 314



 Score =  133 bits (334), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 87/232 (37%), Positives = 135/232 (58%), Gaps = 9/232 (3%)

Query: 53  SVIHNDSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLI 112
           S+I N    M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +
Sbjct: 13  SIITN----MQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL 67

Query: 113 ESYITLDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMR 171
           E   TL   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +
Sbjct: 68  EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-K 126

Query: 172 ICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEV 229
             IP +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV
Sbjct: 127 EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEV 186

Query: 230 AKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
              DT+ +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 187 EASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 238



 Score =  108 bits (270), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 74/216 (34%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 108 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 165

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 166 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 224

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 225 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 283

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 284 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 319


>gi|61223100|gb|AAX40652.1| polyubiquitin [Oryza sativa Japonica Group]
          Length = 381

 Score =  162 bits (409), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLVFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 327 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 373



 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 108/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEFSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRLVF  +QLED R LA Y I  ES ++L
Sbjct: 251 IDNVKAKIQDKEGIPPDQQRLVFAGKQLEDGRTLADYNIQKESTLHL 297



 Score =  132 bits (332), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEFSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 73/219 (33%), Positives = 124/219 (56%), Gaps = 8/219 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLVFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSI 215
           +   L   G+QL++ +TLA Y+I++   L ++  ++  +
Sbjct: 343 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGL 381


>gi|297840967|ref|XP_002888365.1| polyubiquitin [Arabidopsis lyrata subsp. lyrata]
 gi|297334206|gb|EFH64624.1| polyubiquitin [Arabidopsis lyrata subsp. lyrata]
          Length = 458

 Score =  162 bits (409), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEIESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 403 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 449



 Score =  162 bits (409), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LE+   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEIESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 251 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 297



 Score =  162 bits (409), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LE+  + T+ +VK  ++  +  IP 
Sbjct: 208 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEIESSDTIDNVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 327 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 373



 Score =  134 bits (336), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  109 bits (272), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 73/220 (33%), Positives = 124/220 (56%), Gaps = 8/220 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++++ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEIESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSIF 216
           +   L   G+QL++ +TLA Y+I++   L ++  ++   F
Sbjct: 419 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGSF 458


>gi|1304128|dbj|BAA09860.1| polyubiquitin [Homo sapiens]
          Length = 611

 Score =  162 bits (409), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 319 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 377 LRGGMQIFVKTLTG-KTITLEGEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 435

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 436 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 494

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 495 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 554

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 555 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 601



 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  159 bits (401), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 165/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LE   + T+ +VK  ++  +  IP 
Sbjct: 360 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEGEPSDTIENVKAKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 419 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 478

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 479 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 525



 Score =  132 bits (332), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  105 bits (263), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 73/214 (34%), Positives = 120/214 (56%), Gaps = 8/214 (3%)

Query: 6   TEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---NDSGVM 62
           ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H      G M
Sbjct: 400 SDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 457

Query: 63  KLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLN 122
           +++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   N
Sbjct: 458 QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516

Query: 123 INNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCEL 181
           I  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L
Sbjct: 517 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQRL 575

Query: 182 FRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSI 215
              G+QL++ +TL+ Y+I++   L ++  ++  +
Sbjct: 576 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 609



 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 51/135 (37%), Positives = 77/135 (57%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 471 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 528

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 529 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 587

Query: 118 LDVLNINNEDTLQMI 132
           L   NI  E TL ++
Sbjct: 588 LSDYNIQKESTLHLV 602


>gi|9837284|gb|AAG00512.1|AF285161_1 polyubiquitin C [Mus musculus]
          Length = 734

 Score =  162 bits (409), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 167/287 (58%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G +PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGISPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVEPSDTIENVKAKIQDK--EGISPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 419 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 478

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 479 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 525



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 319 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 377 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 435

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 436 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 494

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 495 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 554

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 555 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 601



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 395 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 452

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 453 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 511

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 512 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 570

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 571 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 630

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 631 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 677



 Score =  159 bits (402), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 165/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++      P 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGISPD 267

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   +F  G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 268 QQRLIF-AGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  157 bits (397), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 165/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGI   +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGISPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 403 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  121 bits (304), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 86/245 (35%), Positives = 138/245 (56%), Gaps = 10/245 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 471 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 528

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 529 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 587

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 588 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 646

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I L+V    T
Sbjct: 647 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSVT 706

Query: 235 VRDVK 239
            + VK
Sbjct: 707 TKKVK 711



 Score = 86.7 bits (213), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 62/169 (36%), Positives = 95/169 (56%), Gaps = 7/169 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 547 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 604

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 605 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 663

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKK 165
           L   NI  E TL ++   +   +IFV+T T  T+ L+V  + T   VK+
Sbjct: 664 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSVTTKKVKQ 712


>gi|444434919|dbj|BAM77034.1| ubiquitin C [Homo sapiens]
          Length = 533

 Score =  162 bits (409), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 108/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  V+  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKVQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  160 bits (406), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKVQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  160 bits (406), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  ++ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKVQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKAITLEVEPSDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 403 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449



 Score =  159 bits (401), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 165/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K ++  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVEPSDTIENVKAKVQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T   + LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKAITLEVEPSDTIENVKAKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 419 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 478

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 479 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 525



 Score =  132 bits (332), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  106 bits (265), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 73/219 (33%), Positives = 123/219 (56%), Gaps = 8/219 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 319 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  K   L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 377 LRGGMQIFVKTLTG-KAITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 435

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 436 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 494

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSI 215
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  +
Sbjct: 495 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGV 533


>gi|23397122|gb|AAN31845.1| putative polyubiquitin (UBQ10) [Arabidopsis thaliana]
          Length = 464

 Score =  161 bits (408), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 251 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 297



 Score =  161 bits (408), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 327 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 373



 Score =  132 bits (333), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  131 bits (330), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 91/257 (35%), Positives = 146/257 (56%), Gaps = 10/257 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 402

Query: 235 VRDVKDKLFREIGQAPD 251
           + +VK K+  + G  PD
Sbjct: 403 IDNVKAKIQDKEGIPPD 419


>gi|510473|emb|CAA52416.1| polyubiquitin [Artemia franciscana]
          Length = 697

 Score =  161 bits (408), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKQ-GIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  161 bits (408), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKQGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 319 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 377 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 435

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 436 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 494

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 495 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 554

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 555 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 601



 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 395 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 452

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 453 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 511

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 512 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 570

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 571 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 630

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 631 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 677



 Score =  160 bits (404), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ ++GIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKQGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 403 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449



 Score =  160 bits (404), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  + I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVEPSDTIENVKAKIQDK--QGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 419 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 478

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 479 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 525



 Score =  132 bits (332), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  107 bits (267), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 74/218 (33%), Positives = 123/218 (56%), Gaps = 8/218 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 471 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 528

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 529 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 587

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 588 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 646

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  
Sbjct: 647 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 684


>gi|302393781|sp|P62976.2|UBIQP_CRIGR RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
           Contains: RecName: Full=Ubiquitin-related 1; Contains:
           RecName: Full=Ubiquitin-related 2; Flags: Precursor
 gi|940395|dbj|BAA09853.1| polyubiquitin [Cricetulus sp.]
          Length = 658

 Score =  161 bits (408), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 319 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 377 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 435

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 436 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 494

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 495 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 554

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 555 IENVKAKIQDKQGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 601



 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 403 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449



 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 419 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 478

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 479 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 525



 Score =  132 bits (332), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  124 bits (311), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 86/245 (35%), Positives = 139/245 (56%), Gaps = 10/245 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 395 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 452

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 453 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 511

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 512 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKQ-GIPP 570

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   +T
Sbjct: 571 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSNT 630

Query: 235 VRDVK 239
           ++  K
Sbjct: 631 IKKSK 635


>gi|9837286|gb|AAG00513.1|AF285162_1 polyubiquitin C [Mus musculus]
          Length = 886

 Score =  161 bits (408), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEGGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  161 bits (408), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE G T+ DY I   S +H    
Sbjct: 167 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEGGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G +PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 403 IENVKAKIQDKEGISPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449



 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 395 LEVEPSDTIENVKAKIQDK--EGISPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 452

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 453 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 511

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 512 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 570

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 571 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 630

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 631 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 677



 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 471 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 528

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 529 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 587

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 588 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 646

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 647 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 706

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 707 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 753



 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 547 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 604

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 605 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 663

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 664 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 722

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 723 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 782

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 783 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 829



 Score =  160 bits (406), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 165/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL+  +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEGGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  159 bits (402), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 165/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++      P 
Sbjct: 360 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGISPD 419

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   +F  G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 420 QQRLIF-AGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 478

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 479 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 525



 Score =  157 bits (398), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 165/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 319 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGI   +  + + GK +E   T
Sbjct: 377 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGISPDQQRLIFAGKQLEDGRT 435

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 436 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 494

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 495 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 554

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 555 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 601



 Score =  129 bits (325), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 130/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLE  R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEGGRTLSDYNIQKESTLHL 221



 Score =  121 bits (304), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 86/245 (35%), Positives = 138/245 (56%), Gaps = 10/245 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 623 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 680

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 681 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 739

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 740 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 798

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I L+V    T
Sbjct: 799 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSVT 858

Query: 235 VRDVK 239
            + VK
Sbjct: 859 TKKVK 863



 Score = 86.7 bits (213), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 62/169 (36%), Positives = 95/169 (56%), Gaps = 7/169 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 699 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 756

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 757 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 815

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKK 165
           L   NI  E TL ++   +   +IFV+T T  T+ L+V  + T   VK+
Sbjct: 816 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSVTTKKVKQ 864


>gi|330790588|ref|XP_003283378.1| ubiquitin [Dictyostelium purpureum]
 gi|325086643|gb|EGC40029.1| ubiquitin [Dictyostelium purpureum]
 gi|328867190|gb|EGG15573.1| ubiquitin [Dictyostelium fasciculatum]
          Length = 381

 Score =  161 bits (408), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEGSDTIENVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDTIENVKTKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  161 bits (408), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEGSDTIENVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDTIENVKTKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  132 bits (333), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDTIENVKTKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  107 bits (268), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 74/218 (33%), Positives = 123/218 (56%), Gaps = 8/218 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVEGSDTIENVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDTIENVKTKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 380


>gi|115460714|ref|NP_001053957.1| Os04g0628100 [Oryza sativa Japonica Group]
 gi|113565528|dbj|BAF15871.1| Os04g0628100 [Oryza sativa Japonica Group]
          Length = 392

 Score =  161 bits (408), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 102 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 159

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 160 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 218

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 219 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 277

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 278 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 337

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 338 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 384



 Score =  160 bits (405), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 26  LEVEFSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 83

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 84  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 142

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 143 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 201

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 202 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 261

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 262 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 308



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 12  MQIFVKTLTG-KTITLEVEFSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 70

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 71  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 129

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 130 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 189

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 190 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 232



 Score =  108 bits (269), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 73/219 (33%), Positives = 124/219 (56%), Gaps = 8/219 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 178 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 235

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 236 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 294

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 295 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 353

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSI 215
           +   L   G+QL++ +TLA Y+I++   L ++  ++  +
Sbjct: 354 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGL 392


>gi|302143601|emb|CBI22354.3| unnamed protein product [Vitis vinifera]
          Length = 771

 Score =  161 bits (408), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 56  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 113

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 114 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 172

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 173 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 231

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 232 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 291

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 292 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 338



 Score =  161 bits (408), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 424 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 481

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 482 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 540

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 541 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 599

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 600 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 659

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 660 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 706



 Score =  145 bits (366), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 95/250 (38%), Positives = 144/250 (57%), Gaps = 8/250 (3%)

Query: 38  LENGLTVIDYGIPNNSVIH---NDSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEV 94
           LE+G T+ DY I   S +H      G M+++ KT +  KT  L+   SDTI+N+K  I+ 
Sbjct: 15  LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQD 73

Query: 95  REGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLE 153
           +EGIP  +  + + GK +E   TL   NI  E TL ++   +   +IFV+T T  T+ LE
Sbjct: 74  KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 133

Query: 154 VRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKH 213
           V  + T+ +VK  ++  +  IP +   L   G+QL++ +TLA Y+I++   L ++  ++ 
Sbjct: 134 VESSDTIDNVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRG 192

Query: 214 S--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASY 271
              IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+F  +QLED R LA Y
Sbjct: 193 GMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 252

Query: 272 KIVNESIVNL 281
            I  ES ++L
Sbjct: 253 NIQKESTLHL 262



 Score =  133 bits (335), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 90/241 (37%), Positives = 139/241 (57%), Gaps = 9/241 (3%)

Query: 45  IDYGI-PNNSVIHNDSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEY 103
           ID+ + PN S+       M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  + 
Sbjct: 395 IDHSLFPNRSLFPFK---MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQ 450

Query: 104 DIYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLD 162
            + + GK +E   TL   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +
Sbjct: 451 RLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDN 510

Query: 163 VKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLL 220
           VK  ++  +  IP +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L
Sbjct: 511 VKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 569

Query: 221 NGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVN 280
            G+ I LEV   DT+ +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++
Sbjct: 570 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 629

Query: 281 L 281
           L
Sbjct: 630 L 630



 Score =  126 bits (317), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 108/350 (30%), Positives = 162/350 (46%), Gaps = 72/350 (20%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 132 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 189

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 190 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 248

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++      P 
Sbjct: 249 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPD 308

Query: 177 EDCELF----------------------------RGGEQLQ---------NLKTLAYYDI 199
           +   +F                            RGG+ +          NL T    +I
Sbjct: 309 QQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGDPMDVKNDFLPSPNLPTSTTINI 368

Query: 200 K---------------ENEVLQIIRHVKHS-------------IFVKLLNGRYIILEVAK 231
           K               E +   +   + HS             IFVK L G+ I LEV  
Sbjct: 369 KYFLSSHHSKRLCGLPEKQSSFLCLFIDHSLFPNRSLFPFKMQIFVKTLTGKTITLEVES 428

Query: 232 FDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
            DT+ +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 429 SDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 478



 Score =  114 bits (284), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 96/286 (33%), Positives = 150/286 (52%), Gaps = 20/286 (6%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIHNDSG 60
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 284 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL--- 338

Query: 61  VMKLYFKTPSNEKTFELKANR--SDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITL 118
           V++L    P + K   L +    + T  NIK+ +        H      G  L E   + 
Sbjct: 339 VLRLRGGDPMDVKNDFLPSPNLPTSTTINIKYFLSS------HHSKRLCG--LPEKQSSF 390

Query: 119 DVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSE 177
             L I++         P ++Q IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +
Sbjct: 391 LCLFIDHSLFPNRSLFPFKMQ-IFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPD 448

Query: 178 DCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTV 235
              L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+
Sbjct: 449 QQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI 508

Query: 236 RDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
            +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 509 DNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 554



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 68/216 (31%), Positives = 111/216 (51%), Gaps = 32/216 (14%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 576 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 633

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 634 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 692

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LE R                     
Sbjct: 693 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEQR--------------------- 731

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
               L   G+QL++ +TLA Y+I++   L ++  ++
Sbjct: 732 ----LIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 763


>gi|326495764|dbj|BAJ85978.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326509329|dbj|BAJ91581.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 305

 Score =  161 bits (408), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 251 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 297



 Score =  133 bits (334), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  107 bits (268), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 73/216 (33%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TLA Y+I++   L ++  ++
Sbjct: 267 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 302


>gi|1800281|gb|AAB68045.1| polyubiquitin [Fragaria x ananassa]
          Length = 381

 Score =  161 bits (408), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKAKIXDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 327 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 373



 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 165/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I  +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIXDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 251 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 297



 Score =  132 bits (333), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 130/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  +   +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIXD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  108 bits (269), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 73/218 (33%), Positives = 123/218 (56%), Gaps = 8/218 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
           +   L   G+QL++ +TLA Y+I++   L ++  ++  
Sbjct: 343 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 380


>gi|281208308|gb|EFA82486.1| ubiquitin [Polysphondylium pallidum PN500]
          Length = 443

 Score =  161 bits (408), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 153 LEVEGSDTIENVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 210

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 211 LRGGMQIFVKTLTG-KTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 269

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 270 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDTIENVKTKIQD-KEGIPP 328

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 329 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDT 388

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 389 IENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 435



 Score =  156 bits (394), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 101/267 (37%), Positives = 154/267 (57%), Gaps = 8/267 (2%)

Query: 21  EEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---NDSGVMKLYFKTPSNEKTFEL 77
           +E I  D   L +AG+QLE+G T+ DY I   S +H      G M+++ KT +  KT  L
Sbjct: 95  KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG-KTITL 153

Query: 78  KANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMISVPKE 137
           +   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   NI  E TL ++   + 
Sbjct: 154 EVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRG 213

Query: 138 LQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAY 196
             +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TL+ 
Sbjct: 214 GMQIFVKTLTGKTITLEVEGSDTIENVKTKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSD 272

Query: 197 YDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQR 254
           Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QR
Sbjct: 273 YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDTIENVKTKIQDKEGIPPDQQR 332

Query: 255 LVFKRQQLEDDRNLASYKIVNESIVNL 281
           L+F  +QLED R L+ Y I  ES ++L
Sbjct: 333 LIFAGKQLEDGRTLSDYNIQKESTLHL 359



 Score =  140 bits (353), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 100/287 (34%), Positives = 157/287 (54%), Gaps = 24/287 (8%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEGSDTIENVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L              I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITL--------------IQDKEGIPPDQQRLIFAGKQLEDGRT 117

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 118 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDTIENVKTKIQD-KEGIPP 176

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 177 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDT 236

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 237 IENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 283



 Score =  119 bits (297), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 79/222 (35%), Positives = 123/222 (55%), Gaps = 17/222 (7%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTSTVKLEVRRAHTVLDVKKMVESMRICIPSEDCEL 181
           NI  E TL ++   +   +IFV+T T        +  T++  K+        IP +   L
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTG-------KTITLIQDKE-------GIPPDQQRL 105

Query: 182 FRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVK 239
              G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK
Sbjct: 106 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDTIENVK 165

Query: 240 DKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
            K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 166 TKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 207



 Score =  107 bits (268), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 74/218 (33%), Positives = 123/218 (56%), Gaps = 8/218 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 229 LEVEGSDTIENVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 286

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 287 LRGGMQIFVKTLTG-KTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 345

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 346 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDTIENVKTKIQD-KEGIPP 404

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  
Sbjct: 405 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 442


>gi|2627129|dbj|BAA23486.1| polyubiquitin [Homo sapiens]
          Length = 609

 Score =  161 bits (408), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  161 bits (408), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  161 bits (408), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 403 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449



 Score =  159 bits (402), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 165/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 319 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 377 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 435

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+  EV  + T+ +VK  ++  +  IP 
Sbjct: 436 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITXEVEPSDTIENVKAKIQD-KEGIPP 494

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 495 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 554

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 555 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 601



 Score =  132 bits (332), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  106 bits (265), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 73/219 (33%), Positives = 123/219 (56%), Gaps = 8/219 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 395 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 452

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT   +   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 453 LRGGMQIFVKTLTG-KTITXEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 511

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 512 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 570

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSI 215
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  +
Sbjct: 571 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGV 609


>gi|3047318|gb|AAC13691.1| poly-ubiquitin [Magnaporthe grisea]
          Length = 379

 Score =  161 bits (408), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 105/285 (36%), Positives = 164/285 (57%), Gaps = 8/285 (2%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKETTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSIFVKLLNGRYIILEVAKFDTVR 236
           +   L   G+QL++ +TL+ Y+I++   L ++      IFVK L G+ I LEV   DT+ 
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRGGMQIFVKTLTGKTITLEVESSDTID 250

Query: 237 DVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 295



 Score =  156 bits (395), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 166/287 (57%), Gaps = 12/287 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   + +H    
Sbjct: 91  LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKETTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL +  V +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHL--VLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 264

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 265 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 324

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 325 IDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 371



 Score =  131 bits (330), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKETTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 72/214 (33%), Positives = 123/214 (57%), Gaps = 6/214 (2%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH-NDS 59
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 60  GVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLD 119
           G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL 
Sbjct: 225 GGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLS 283

Query: 120 VLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSED 178
             NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP + 
Sbjct: 284 DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPPDQ 342

Query: 179 CELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
             L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 343 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 376


>gi|57163957|ref|NP_001009202.1| polyubiquitin-B [Ovis aries]
 gi|302595880|sp|P0CG55.1|UBB_SHEEP RecName: Full=Polyubiquitin-B; Contains: RecName:
           Full=Ubiquitin-related; Contains: RecName:
           Full=Ubiquitin; Flags: Precursor
 gi|2707837|gb|AAB92373.1| polyubiquitin [Ovis aries]
          Length = 305

 Score =  161 bits (408), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  MRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  132 bits (332), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRMRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  107 bits (267), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 74/216 (34%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 302


>gi|145046250|ref|NP_001013290.2| ubiquitin [Danio rerio]
          Length = 610

 Score =  161 bits (408), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  161 bits (408), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  161 bits (408), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 403 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449



 Score =  161 bits (408), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 419 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 478

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 479 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 525



 Score =  161 bits (408), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 319 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 377 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 435

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 436 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 494

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 495 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 554

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 555 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 601



 Score =  132 bits (332), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  107 bits (268), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 74/216 (34%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 395 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 452

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 453 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 511

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 512 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 570

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 571 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 606


>gi|444434921|dbj|BAM77035.1| ubiquitin C [Homo sapiens]
          Length = 685

 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 403 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449



 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 419 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 478

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 479 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 525



 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 319 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 377 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 435

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 436 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 494

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 495 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 554

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 555 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 601



 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 395 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 452

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 453 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 511

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 512 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 570

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 571 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 630

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 631 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 677



 Score =  160 bits (404), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 165/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +    + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRSIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  159 bits (401), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 165/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D     +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEPSDTIENVKAKIQDK--EGIPPDQQRSIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  131 bits (330), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 130/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++      P +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRS 119

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           +F  G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 120 IF-AGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  108 bits (270), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 74/219 (33%), Positives = 124/219 (56%), Gaps = 8/219 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 471 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 528

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 529 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 587

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 588 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 646

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSI 215
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  +
Sbjct: 647 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGV 685


>gi|29612653|gb|AAH49473.1| Zgc:172187 protein [Danio rerio]
          Length = 480

 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 37  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 94

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 95  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 153

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 154 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 212

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 213 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 272

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 273 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 319



 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 113 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 170

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 171 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 229

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 230 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 288

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 289 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 348

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 349 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 395



 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 189 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 246

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 247 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 305

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 306 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 364

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 365 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 424

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 425 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 471



 Score =  132 bits (332), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/224 (37%), Positives = 131/224 (58%), Gaps = 5/224 (2%)

Query: 61  VMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDV 120
            M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL  
Sbjct: 22  TMQIFVKTLAG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 80

Query: 121 LNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDC 179
            NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +  
Sbjct: 81  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQ 139

Query: 180 ELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRD 237
            L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +
Sbjct: 140 RLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIEN 199

Query: 238 VKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 200 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 243



 Score =  107 bits (268), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 74/216 (34%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 265 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 322

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 323 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 381

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 382 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 440

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 441 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 476


>gi|196016942|ref|XP_002118320.1| hypothetical protein TRIADDRAFT_64418 [Trichoplax adhaerens]
 gi|190579096|gb|EDV19200.1| hypothetical protein TRIADDRAFT_64418 [Trichoplax adhaerens]
          Length = 457

 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKSKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEPSDTIENVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKSKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVEPSDTIENVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKSKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 403 IENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449



 Score =  132 bits (333), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKSKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  107 bits (266), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 74/216 (34%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVEPSDTIENVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKSKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 419 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 454


>gi|104303708|gb|ABF66639.1| ubiquitin [Pelophylax nigromaculatus]
          Length = 305

 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  107 bits (268), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 74/216 (34%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 302


>gi|194749344|ref|XP_001957099.1| GF10254 [Drosophila ananassae]
 gi|190624381|gb|EDV39905.1| GF10254 [Drosophila ananassae]
          Length = 837

 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 403 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449



 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 419 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 478

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 479 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 525



 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 319 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 377 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 435

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 436 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 494

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 495 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 554

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 555 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 601



 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 395 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 452

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 453 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 511

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 512 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 570

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 571 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 630

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 631 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 677



 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 471 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 528

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 529 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 587

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 588 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 646

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 647 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 706

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 707 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 753



 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 547 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 604

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 605 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 663

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 664 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 722

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 723 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 782

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 783 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 829



 Score =  132 bits (332), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  109 bits (272), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 75/219 (34%), Positives = 124/219 (56%), Gaps = 8/219 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 623 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 680

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 681 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 739

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 740 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 798

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSI 215
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  I
Sbjct: 799 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGI 837


>gi|195132655|ref|XP_002010758.1| GI21526 [Drosophila mojavensis]
 gi|260830119|ref|XP_002610009.1| hypothetical protein BRAFLDRAFT_131116 [Branchiostoma floridae]
 gi|193907546|gb|EDW06413.1| GI21526 [Drosophila mojavensis]
 gi|229295371|gb|EEN66019.1| hypothetical protein BRAFLDRAFT_131116 [Branchiostoma floridae]
          Length = 609

 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 403 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449



 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 419 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 478

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 479 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 525



 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 319 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 377 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 435

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 436 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 494

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 495 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 554

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 555 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 601



 Score =  132 bits (332), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  107 bits (267), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 74/218 (33%), Positives = 123/218 (56%), Gaps = 8/218 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 395 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 452

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 453 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 511

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 512 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 570

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  
Sbjct: 571 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 608


>gi|86515356|ref|NP_001034506.1| polyubiquitin [Tribolium castaneum]
 gi|21314343|gb|AAM46898.1|AF506022_1 polyubiquitin [Tribolium castaneum]
          Length = 685

 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  160 bits (405), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 165/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++      P 
Sbjct: 360 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPD 419

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   +F  G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 420 QQRSIF-AGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 478

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 479 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 525



 Score =  159 bits (403), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 165/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 319 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +    + GK +E   T
Sbjct: 377 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRSIFAGKQLEDGRT 435

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 436 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 494

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 495 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 554

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 555 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 601



 Score =  159 bits (401), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 165/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D     +AG+QLE+G T+ DY I   S +H    
Sbjct: 395 LEVEPSDTIENVKAKIQDK--EGIPPDQQRSIFAGKQLEDGRTLSDYNIQKESTLHLVLR 452

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 453 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 511

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 512 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 570

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 571 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 630

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 631 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 677



 Score =  132 bits (332), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  107 bits (267), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 74/216 (34%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 471 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 528

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 529 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 587

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 588 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 646

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 647 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 682


>gi|260806905|ref|XP_002598324.1| hypothetical protein BRAFLDRAFT_113894 [Branchiostoma floridae]
 gi|229283596|gb|EEN54336.1| hypothetical protein BRAFLDRAFT_113894 [Branchiostoma floridae]
          Length = 600

 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 403 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449



 Score =  160 bits (404), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 108/285 (37%), Positives = 163/285 (57%), Gaps = 15/285 (5%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSIFVKLLNGRYIILEVAKFDTVR 236
           +   L   G+QL++ +TL+ Y+I++   L       H IFVK L G+ I LEV   DT+ 
Sbjct: 419 DQQRLIFAGKQLEDGRTLSDYNIQKESTL-------HLIFVKTLTGKTITLEVEPSDTIE 471

Query: 237 DVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 472 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 516



 Score =  157 bits (397), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 163/287 (56%), Gaps = 19/287 (6%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 319 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 377 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 435

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL +I         FV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 436 LSDYNIQKESTLHLI---------FVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 485

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 486 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 545

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 546 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 592



 Score =  132 bits (332), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  104 bits (259), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 72/216 (33%), Positives = 118/216 (54%), Gaps = 11/216 (5%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIHNDSG 60
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 395 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH---- 448

Query: 61  VMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDV 120
              L F      KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL  
Sbjct: 449 ---LIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 505

Query: 121 LNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDC 179
            NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +  
Sbjct: 506 YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQ 564

Query: 180 ELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSI 215
            L   G+QL++ +TL+ Y+I++   L ++  ++  +
Sbjct: 565 RLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGL 600


>gi|73995130|ref|XP_853060.1| PREDICTED: polyubiquitin-C isoform 2 [Canis lupus familiaris]
 gi|149633339|ref|XP_001509120.1| PREDICTED: polyubiquitin-C [Ornithorhynchus anatinus]
 gi|194214411|ref|XP_001499132.2| PREDICTED: polyubiquitin [Equus caballus]
 gi|297263837|ref|XP_002798872.1| PREDICTED: hypothetical protein LOC712934 isoform 3 [Macaca
           mulatta]
 gi|344297276|ref|XP_003420325.1| PREDICTED: polyubiquitin-C-like [Loxodonta africana]
 gi|345791301|ref|XP_003433478.1| PREDICTED: polyubiquitin-C isoform 1 [Canis lupus familiaris]
 gi|390468353|ref|XP_003733926.1| PREDICTED: polyubiquitin-C-like [Callithrix jacchus]
 gi|343958420|dbj|BAK63065.1| ubiquitin [Pan troglodytes]
 gi|343959062|dbj|BAK63386.1| ubiquitin [Pan troglodytes]
 gi|431912123|gb|ELK14261.1| Ubiquitin [Pteropus alecto]
          Length = 381

 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  132 bits (332), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  108 bits (270), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 74/219 (33%), Positives = 124/219 (56%), Gaps = 8/219 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSI 215
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  +
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGV 381


>gi|357474763|ref|XP_003607667.1| Multidrug resistance protein ABC transporter family [Medicago
           truncatula]
 gi|355508722|gb|AES89864.1| Multidrug resistance protein ABC transporter family [Medicago
           truncatula]
          Length = 752

 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 234 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 291

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 292 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 350

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 351 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 409

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 410 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 469

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 470 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 516



 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 310 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 367

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 368 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 426

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 427 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 485

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 486 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 545

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 546 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 592



 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 386 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 443

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 444 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 502

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 503 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 561

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 562 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 621

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 622 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 668



 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 462 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 519

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 520 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 578

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 579 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 637

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 638 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 697

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 698 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 744



 Score =  134 bits (336), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 87/227 (38%), Positives = 133/227 (58%), Gaps = 5/227 (2%)

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
           DS  M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 216 DSFKMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 274

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 275 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 333

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 334 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 393

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 394 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 440



 Score =  107 bits (267), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 73/212 (34%), Positives = 121/212 (57%), Gaps = 8/212 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 538 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 595

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 596 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 654

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 655 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 713

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQII 208
           +   L   G+QL++ +TLA Y+I++   L ++
Sbjct: 714 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 745


>gi|46359622|dbj|BAD15290.1| polyubiquitin [Crassostrea gigas]
          Length = 685

 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 403 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449



 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 419 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 478

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 479 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 525



 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 319 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 377 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 435

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 436 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 494

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 495 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 554

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 555 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 601



 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 395 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 452

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 453 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 511

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 512 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 570

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 571 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 630

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 631 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 677



 Score =  132 bits (332), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  107 bits (267), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 74/218 (33%), Positives = 123/218 (56%), Gaps = 8/218 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 471 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 528

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 529 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 587

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 588 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 646

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  
Sbjct: 647 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 684


>gi|148235355|ref|NP_001080865.1| ubiquitin C [Xenopus laevis]
 gi|32766481|gb|AAH54976.1| Ubc-prov protein [Xenopus laevis]
          Length = 609

 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 403 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449



 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 419 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 478

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 479 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 525



 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 319 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 377 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 435

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 436 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 494

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 495 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 554

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 555 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 601



 Score =  132 bits (332), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 75/219 (34%), Positives = 124/219 (56%), Gaps = 8/219 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 395 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 452

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 453 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 511

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 512 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 570

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSI 215
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  I
Sbjct: 571 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGI 609


>gi|432899994|ref|XP_004076672.1| PREDICTED: polyubiquitin-C-like [Oryzias latipes]
          Length = 533

 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 403 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449



 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 419 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 478

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 479 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 525



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  107 bits (267), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 74/218 (33%), Positives = 123/218 (56%), Gaps = 8/218 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 319 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 377 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 435

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 436 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 494

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  
Sbjct: 495 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 532


>gi|24657014|ref|NP_728908.1| Ubiquitin-63E, isoform A [Drosophila melanogaster]
 gi|24657019|ref|NP_523909.2| Ubiquitin-63E, isoform B [Drosophila melanogaster]
 gi|45552935|ref|NP_995994.1| Ubiquitin-63E, isoform C [Drosophila melanogaster]
 gi|442630045|ref|NP_001261383.1| Ubiquitin-63E, isoform D [Drosophila melanogaster]
 gi|302595965|sp|P0CG69.1|UBIQP_DROME RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
           Flags: Precursor
 gi|23092947|gb|AAF47806.3| Ubiquitin-63E, isoform A [Drosophila melanogaster]
 gi|23092948|gb|AAG22241.2| Ubiquitin-63E, isoform B [Drosophila melanogaster]
 gi|45445791|gb|AAS64964.1| Ubiquitin-63E, isoform C [Drosophila melanogaster]
 gi|440215267|gb|AGB94078.1| Ubiquitin-63E, isoform D [Drosophila melanogaster]
          Length = 763

 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 403 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449



 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 419 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 478

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 479 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 525



 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 319 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 377 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 435

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 436 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 494

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 495 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 554

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 555 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 601



 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 395 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 452

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 453 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 511

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 512 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 570

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 571 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 630

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 631 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 677



 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 471 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 528

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 529 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 587

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 588 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 646

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 647 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 706

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 707 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 753



 Score =  132 bits (332), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 75/219 (34%), Positives = 124/219 (56%), Gaps = 8/219 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 547 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 604

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 605 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 663

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 664 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 722

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSI 215
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  I
Sbjct: 723 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGI 761


>gi|55742507|ref|NP_001006688.1| ubiquitin C [Xenopus (Silurana) tropicalis]
 gi|297693402|ref|XP_002824008.1| PREDICTED: polyubiquitin-C isoform 1 [Pongo abelii]
 gi|297693404|ref|XP_002824009.1| PREDICTED: polyubiquitin-C isoform 2 [Pongo abelii]
 gi|297693406|ref|XP_002824010.1| PREDICTED: polyubiquitin-C isoform 3 [Pongo abelii]
 gi|297693408|ref|XP_002824011.1| PREDICTED: polyubiquitin-C isoform 4 [Pongo abelii]
 gi|297693416|ref|XP_002824015.1| PREDICTED: polyubiquitin-C isoform 8 [Pongo abelii]
 gi|297693418|ref|XP_002824016.1| PREDICTED: polyubiquitin-C isoform 9 [Pongo abelii]
 gi|297693420|ref|XP_002824017.1| PREDICTED: polyubiquitin-C isoform 10 [Pongo abelii]
 gi|395745069|ref|XP_003778208.1| PREDICTED: polyubiquitin-C [Pongo abelii]
 gi|302595941|sp|P0CG66.1|UBC_GORGO RecName: Full=Polyubiquitin-C; Contains: RecName: Full=Ubiquitin;
           Flags: Precursor
 gi|28316340|dbj|BAC56953.1| polyubiquitin C [Gorilla gorilla]
 gi|49257812|gb|AAH74652.1| ubiquitin C [Xenopus (Silurana) tropicalis]
 gi|89271842|emb|CAJ82066.1| novel protein [Xenopus (Silurana) tropicalis]
 gi|444434923|dbj|BAM77036.1| ubiquitin C [Homo sapiens]
          Length = 609

 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 403 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449



 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 419 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 478

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 479 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 525



 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 319 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 377 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 435

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 436 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 494

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 495 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 554

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 555 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 601



 Score =  132 bits (332), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  108 bits (270), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 74/219 (33%), Positives = 124/219 (56%), Gaps = 8/219 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 395 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 452

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 453 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 511

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 512 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 570

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSI 215
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  +
Sbjct: 571 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGV 609


>gi|21429768|gb|AAM50562.1| AT20865p [Drosophila melanogaster]
          Length = 1067

 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 403 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449



 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 419 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 478

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 479 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 525



 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 319 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 377 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 435

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 436 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 494

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 495 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 554

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 555 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 601



 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 395 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 452

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 453 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 511

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 512 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 570

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 571 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 630

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 631 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 677



 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 471 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 528

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 529 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 587

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 588 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 646

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 647 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 706

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 707 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 753



 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 547 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 604

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 605 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 663

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 664 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 722

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 723 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 782

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 783 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 829



 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 623 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 680

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 681 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 739

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 740 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 798

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 799 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 858

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 859 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 905



 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 699 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 756

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 757 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 815

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 816 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 874

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 875 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 934

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 935 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 981



 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1    MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
            ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 775  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 832

Query: 58   DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
              G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 833  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 891

Query: 118  LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
            L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 892  LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 950

Query: 177  EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
            +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 951  DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 1010

Query: 235  VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
            + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 1011 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 1057



 Score =  132 bits (332), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  109 bits (272), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 75/219 (34%), Positives = 124/219 (56%), Gaps = 8/219 (3%)

Query: 1    MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
            ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 851  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 908

Query: 58   DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
              G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 909  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 967

Query: 118  LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
            L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 968  LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 1026

Query: 177  EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSI 215
            +   L   G+QL++ +TL+ Y+I++   L ++  ++  I
Sbjct: 1027 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGI 1065


>gi|208022675|ref|NP_001129078.1| polyubiquitin-C [Pan troglodytes]
 gi|302595944|sp|P0CG64.1|UBC_PANTR RecName: Full=Polyubiquitin-C; Contains: RecName: Full=Ubiquitin;
           Flags: Precursor
 gi|302595946|sp|P0CG61.1|UBC_PONPY RecName: Full=Polyubiquitin-C; Contains: RecName: Full=Ubiquitin;
           Flags: Precursor
 gi|28316338|dbj|BAC56952.1| polyubiquitin C [Pan troglodytes]
 gi|28316342|dbj|BAC56954.1| polyubiquitin C [Pongo pygmaeus]
          Length = 761

 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 403 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449



 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 419 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 478

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 479 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 525



 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 319 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 377 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 435

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 436 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 494

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 495 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 554

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 555 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 601



 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 395 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 452

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 453 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 511

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 512 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 570

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 571 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 630

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 631 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 677



 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 471 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 528

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 529 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 587

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 588 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 646

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 647 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 706

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 707 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 753



 Score =  132 bits (332), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  108 bits (270), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 74/219 (33%), Positives = 124/219 (56%), Gaps = 8/219 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 547 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 604

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 605 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 663

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 664 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 722

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSI 215
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  +
Sbjct: 723 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGV 761


>gi|444434925|dbj|BAM77037.1| ubiquitin C [Homo sapiens]
          Length = 685

 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 395 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 452

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 453 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 511

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 512 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 570

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 571 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 630

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 631 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 677



 Score =  160 bits (406), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVELSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 419 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 478

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 479 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 525



 Score =  160 bits (405), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 319 LEVELSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 377 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 435

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 436 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 494

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 495 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 554

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 555 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 601



 Score =  160 bits (404), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++      P 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPD 191

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   +F  G+QL++ +TL+ Y I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 192 QQRSIF-AGKQLEDGRTLSDYSIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  158 bits (400), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 165/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D     +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVEPSDTIENVKAKIQDK--EGIPPDQQRSIFAGKQLEDGRTLSDYSIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVELSDTIENVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 403 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449



 Score =  129 bits (325), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 130/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QR +F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRSIFAGKQLEDGRTLSDYSIQKESTLHL 221



 Score =  108 bits (270), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 74/219 (33%), Positives = 124/219 (56%), Gaps = 8/219 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 471 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 528

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 529 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 587

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 588 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 646

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSI 215
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  +
Sbjct: 647 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGV 685


>gi|391358178|sp|P0CG48.3|UBC_HUMAN RecName: Full=Polyubiquitin-C; Contains: RecName: Full=Ubiquitin;
           Flags: Precursor
 gi|340068|gb|AAA36789.1| ubiquitin [Homo sapiens]
 gi|2647408|dbj|BAA23632.1| polyubiquitin UbC [Homo sapiens]
 gi|24657522|gb|AAH39193.1| Ubiquitin C [Homo sapiens]
 gi|28316336|dbj|BAC56951.1| polyubiquitin C [Homo sapiens]
 gi|440903539|gb|ELR54183.1| Polyubiquitin-C, partial [Bos grunniens mutus]
          Length = 685

 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 403 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449



 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 419 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 478

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 479 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 525



 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 319 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 377 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 435

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 436 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 494

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 495 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 554

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 555 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 601



 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 395 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 452

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 453 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 511

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 512 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 570

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 571 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 630

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 631 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 677



 Score =  132 bits (332), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  108 bits (270), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 74/219 (33%), Positives = 124/219 (56%), Gaps = 8/219 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 471 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 528

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 529 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 587

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 588 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 646

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSI 215
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  +
Sbjct: 647 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGV 685


>gi|226477448|emb|CAX72418.1| ubiquitin C [Schistosoma japonicum]
 gi|226484005|emb|CAX79671.1| ubiquitin C [Schistosoma japonicum]
          Length = 381

 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  132 bits (332), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  108 bits (269), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 74/219 (33%), Positives = 124/219 (56%), Gaps = 8/219 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSI 215
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  +
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGL 381


>gi|194866181|ref|XP_001971796.1| GG14240 [Drosophila erecta]
 gi|190653579|gb|EDV50822.1| GG14240 [Drosophila erecta]
          Length = 991

 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 403 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449



 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 419 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 478

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 479 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 525



 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 319 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 377 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 435

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 436 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 494

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 495 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 554

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 555 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 601



 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 395 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 452

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 453 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 511

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 512 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 570

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 571 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 630

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 631 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 677



 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 471 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 528

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 529 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 587

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 588 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 646

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 647 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 706

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 707 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 753



 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 547 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 604

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 605 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 663

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 664 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 722

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 723 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 782

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 783 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 829



 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 623 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 680

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 681 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 739

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 740 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 798

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 799 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 858

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 859 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 905



 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 699 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 756

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 757 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 815

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 816 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 874

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 875 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 934

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 935 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 981



 Score =  132 bits (332), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  108 bits (269), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 74/219 (33%), Positives = 124/219 (56%), Gaps = 8/219 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 775 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 832

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 833 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 891

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 892 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 950

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSI 215
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  +
Sbjct: 951 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 989


>gi|189441656|gb|AAI67447.1| Zgc:172187 protein [Danio rerio]
          Length = 458

 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 403 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449



 Score =  132 bits (332), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  107 bits (267), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 74/216 (34%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 419 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 454


>gi|158256510|dbj|BAF84228.1| unnamed protein product [Homo sapiens]
          Length = 609

 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 319 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 377 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 435

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 436 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSATIENVKAKIQD-KEGIPP 494

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 495 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 554

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 555 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 601



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 403 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 73/219 (33%), Positives = 123/219 (56%), Gaps = 8/219 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 395 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 452

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   S TIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 453 LRGGMQIFVKTLTG-KTITLEVEPSATIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 511

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 512 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 570

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSI 215
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  +
Sbjct: 571 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGV 609


>gi|157671923|ref|NP_062613.3| polyubiquitin-C [Mus musculus]
 gi|342187094|sp|P0CG50.2|UBC_MOUSE RecName: Full=Polyubiquitin-C; Contains: RecName: Full=Ubiquitin;
           Contains: RecName: Full=Ubiquitin-related 1; Contains:
           RecName: Full=Ubiquitin-related 2; Flags: Precursor
          Length = 734

 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 403 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449



 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 419 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 478

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 479 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 525



 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 319 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 377 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 435

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 436 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 494

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 495 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 554

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 555 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 601



 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 395 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 452

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 453 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 511

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 512 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 570

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 571 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 630

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 631 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 677



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  121 bits (304), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 86/245 (35%), Positives = 138/245 (56%), Gaps = 10/245 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 471 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 528

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 529 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 587

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 588 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 646

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I L+V    T
Sbjct: 647 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSVT 706

Query: 235 VRDVK 239
            + VK
Sbjct: 707 TKKVK 711



 Score = 86.7 bits (213), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 62/169 (36%), Positives = 95/169 (56%), Gaps = 7/169 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 547 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 604

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 605 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 663

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKK 165
           L   NI  E TL ++   +   +IFV+T T  T+ L+V  + T   VK+
Sbjct: 664 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSVTTKKVKQ 712


>gi|444434917|dbj|BAM77033.1| ubiquitin C [Homo sapiens]
          Length = 685

 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 403 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449



 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 419 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 478

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 479 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 525



 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 319 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 377 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 435

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 436 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 494

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 495 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 554

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 555 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 601



 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 395 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 452

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 453 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 511

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 512 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 570

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 571 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 630

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 631 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 677



 Score =  160 bits (405), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 165/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+  + IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEPCDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  159 bits (402), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 165/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+    DTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPCDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  131 bits (330), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 130/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV    T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPCDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  108 bits (270), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 74/219 (33%), Positives = 124/219 (56%), Gaps = 8/219 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 471 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 528

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 529 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 587

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 588 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 646

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSI 215
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  +
Sbjct: 647 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGV 685


>gi|426247176|ref|XP_004017362.1| PREDICTED: polyubiquitin-C-like isoform 2 [Ovis aries]
          Length = 310

 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 74/220 (33%), Positives = 124/220 (56%), Gaps = 8/220 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSIF 216
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  + 
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGVL 306


>gi|4105408|gb|AAD02414.1| polyubiquitin [Schistosoma mansoni]
          Length = 295

 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 6   LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 63

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 64  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 122

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 123 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 181

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 182 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 241

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 242 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 288



 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 81/212 (38%), Positives = 124/212 (58%), Gaps = 4/212 (1%)

Query: 73  KTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMI 132
           KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   NI  E TL ++
Sbjct: 2   KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 61

Query: 133 SVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNL 191
              +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ 
Sbjct: 62  LRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQRLIFAGKQLEDG 120

Query: 192 KTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQA 249
           +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  
Sbjct: 121 RTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIP 180

Query: 250 PDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 181 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 212



 Score =  107 bits (267), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 74/218 (33%), Positives = 123/218 (56%), Gaps = 8/218 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 82  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 139

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 140 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 198

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 199 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 257

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  
Sbjct: 258 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 295



 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 28/60 (46%), Positives = 38/60 (63%)

Query: 222 GRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           G+ I LEV   DT+ +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 1   GKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 60


>gi|195403389|ref|XP_002060272.1| GJ16068 [Drosophila virilis]
 gi|194140611|gb|EDW57085.1| GJ16068 [Drosophila virilis]
          Length = 384

 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 81/231 (35%), Positives = 131/231 (56%), Gaps = 10/231 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYI 225
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTI 317


>gi|148687613|gb|EDL19560.1| ubiquitin C, isoform CRA_a [Mus musculus]
 gi|148687614|gb|EDL19561.1| ubiquitin C, isoform CRA_a [Mus musculus]
          Length = 614

 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 275 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 332

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 333 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 391

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 392 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 450

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 451 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 510

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 511 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 557



 Score =  149 bits (377), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 107/318 (33%), Positives = 167/318 (52%), Gaps = 40/318 (12%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNE-------------------------------KTFELKANRSDTIE 86
             G M+++ KT + +                               KT  L+   SDTIE
Sbjct: 225 LRGGMQIFVKTLTGKTINYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 284

Query: 87  NIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEIFVQTP 146
           N+K  I+ +EGIP  +  + + GK +E   TL   NI  E TL ++   +   +IFV+T 
Sbjct: 285 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 344

Query: 147 TS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVL 205
           T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TL+ Y+I++   L
Sbjct: 345 TGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 403

Query: 206 QIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLE 263
            ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+F  +QLE
Sbjct: 404 HLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE 463

Query: 264 DDRNLASYKIVNESIVNL 281
           D R L+ Y I  ES ++L
Sbjct: 464 DGRTLSDYNIQKESTLHL 481



 Score =  149 bits (375), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 107/319 (33%), Positives = 166/319 (52%), Gaps = 42/319 (13%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS---------------------- 214
           +   L   G+QL++ +TL+ Y+I++   L ++  ++                        
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTINYNIQKEST 250

Query: 215 ------------IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQL 262
                       IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+F  +QL
Sbjct: 251 LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL 310

Query: 263 EDDRNLASYKIVNESIVNL 281
           ED R L+ Y I  ES ++L
Sbjct: 311 EDGRTLSDYNIQKESTLHL 329



 Score =  149 bits (375), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 107/319 (33%), Positives = 166/319 (52%), Gaps = 42/319 (13%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS----------------------------- 148
           L   NI  E TL ++   +   +IFV+T T                              
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTINYNIQKESTLHLVLRLRGGMQIFVKT 267

Query: 149 ----TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEV 204
               T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TL+ Y+I++   
Sbjct: 268 LTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST 326

Query: 205 LQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQL 262
           L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+F  +QL
Sbjct: 327 LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL 386

Query: 263 EDDRNLASYKIVNESIVNL 281
           ED R L+ Y I  ES ++L
Sbjct: 387 EDGRTLSDYNIQKESTLHL 405



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  121 bits (304), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 86/245 (35%), Positives = 138/245 (56%), Gaps = 10/245 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 351 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 408

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 409 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 467

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 468 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 526

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I L+V    T
Sbjct: 527 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSVT 586

Query: 235 VRDVK 239
            + VK
Sbjct: 587 TKKVK 591



 Score = 86.7 bits (213), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 62/169 (36%), Positives = 95/169 (56%), Gaps = 7/169 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 427 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 484

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 485 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 543

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKK 165
           L   NI  E TL ++   +   +IFV+T T  T+ L+V  + T   VK+
Sbjct: 544 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSVTTKKVKQ 592


>gi|18256864|gb|AAH21837.1| Ubc protein [Mus musculus]
          Length = 658

 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 403 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449



 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 419 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 478

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 479 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 525



 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 319 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 377 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 435

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 436 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 494

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 495 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 554

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 555 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 601



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  121 bits (304), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 86/245 (35%), Positives = 138/245 (56%), Gaps = 10/245 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 395 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 452

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 453 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 511

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 512 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 570

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I L+V    T
Sbjct: 571 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSVT 630

Query: 235 VRDVK 239
            + VK
Sbjct: 631 TKKVK 635



 Score = 86.7 bits (213), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 62/169 (36%), Positives = 95/169 (56%), Gaps = 7/169 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 471 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 528

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 529 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 587

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKK 165
           L   NI  E TL ++   +   +IFV+T T  T+ L+V  + T   VK+
Sbjct: 588 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSVTTKKVKQ 636


>gi|441630341|ref|XP_004089535.1| PREDICTED: polyubiquitin-C [Nomascus leucogenys]
          Length = 590

 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 72  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 129

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 130 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 188

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 189 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 247

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 248 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 307

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 308 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 354



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 148 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 205

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 206 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 264

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 265 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 323

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 324 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 383

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 384 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 430



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 224 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 281

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 282 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 340

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 341 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 399

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 400 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 459

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 460 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 506



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 300 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 357

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 358 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 416

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 417 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 475

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 476 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 535

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 536 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 582



 Score =  132 bits (332), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/224 (37%), Positives = 131/224 (58%), Gaps = 5/224 (2%)

Query: 61  VMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDV 120
            M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL  
Sbjct: 57  TMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 115

Query: 121 LNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDC 179
            NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +  
Sbjct: 116 YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQ 174

Query: 180 ELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRD 237
            L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +
Sbjct: 175 RLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIEN 234

Query: 238 VKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 235 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 278



 Score =  108 bits (269), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 74/219 (33%), Positives = 124/219 (56%), Gaps = 8/219 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 376 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 433

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 434 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 492

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 493 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 551

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSI 215
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  +
Sbjct: 552 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGV 590


>gi|73695428|gb|AAI03478.1| Ubc protein [Rattus norvegicus]
          Length = 430

 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 85/245 (34%), Positives = 137/245 (55%), Gaps = 10/245 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I L+V     
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSVN 402

Query: 235 VRDVK 239
            + VK
Sbjct: 403 TKKVK 407



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 61/169 (36%), Positives = 94/169 (55%), Gaps = 7/169 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKK 165
           L   NI  E TL ++   +   +IFV+T T  T+ L+V  +     VK+
Sbjct: 360 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSVNTKKVKQ 408


>gi|226473058|emb|CAX71215.1| ubiquitin C [Schistosoma japonicum]
          Length = 456

 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  158 bits (400), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 165/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++       +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLLGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLTFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 403 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449



 Score =  132 bits (332), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  106 bits (265), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 74/216 (34%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LLGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLTFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 419 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 454


>gi|157138589|ref|XP_001664267.1| ubiquitin [Aedes aegypti]
 gi|241694258|ref|XP_002402192.1| ubiquitin/40S ribosomal protein S27A fusion, putative [Ixodes
           scapularis]
 gi|108880555|gb|EAT44780.1| AAEL003877-PB [Aedes aegypti]
 gi|215504684|gb|EEC14178.1| ubiquitin/40S ribosomal protein S27A fusion, putative [Ixodes
           scapularis]
          Length = 609

 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 403 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 419 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 478

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 479 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 525



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 319 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 377 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 435

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 436 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 494

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 495 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 554

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 555 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 601



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  107 bits (267), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 74/218 (33%), Positives = 123/218 (56%), Gaps = 8/218 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 395 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 452

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 453 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 511

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 512 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 570

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  
Sbjct: 571 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 608


>gi|390176272|ref|XP_003736175.1| GA30006 [Drosophila pseudoobscura pseudoobscura]
 gi|388858740|gb|EIM52248.1| GA30006 [Drosophila pseudoobscura pseudoobscura]
          Length = 687

 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 403 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 419 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 478

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 479 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 525



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 319 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 377 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 435

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 436 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 494

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 495 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 554

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 555 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 601



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 395 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 452

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 453 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 511

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 512 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 570

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 571 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 630

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 631 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 677



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  108 bits (270), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 74/219 (33%), Positives = 124/219 (56%), Gaps = 8/219 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 471 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 528

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 529 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 587

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 588 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 646

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSI 215
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  +
Sbjct: 647 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGV 685


>gi|62089150|dbj|BAD93019.1| ubiquitin C variant [Homo sapiens]
          Length = 1309

 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 31  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 88

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 89  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 147

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 148 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 206

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 207 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 266

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 267 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 313



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 107 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 164

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 165 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 223

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 224 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 282

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 283 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 342

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 343 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 389



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 183 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 240

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 241 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 299

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 300 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 358

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 359 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 418

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 419 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 465



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 259 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 316

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 317 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 375

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 376 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 434

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 435 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 494

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 495 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 541



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 335 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 392

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 393 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 451

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 452 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 510

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 511 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 570

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 571 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 617



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 411 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 468

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 469 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 527

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 528 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 586

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 587 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 646

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 647 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 693



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 487 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 544

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 545 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 603

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 604 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 662

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 663 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 722

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 723 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 769



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 563 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 620

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 621 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 679

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 680 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 738

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 739 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 798

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 799 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 845



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 639 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 696

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 697 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 755

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 756 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 814

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 815 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 874

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 875 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 921



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 715 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 772

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 773 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 831

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 832 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 890

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 891 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 950

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 951 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 997



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1    MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
            ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 791  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 848

Query: 58   DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
              G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 849  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 907

Query: 118  LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
            L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 908  LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 966

Query: 177  EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
            +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 967  DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 1026

Query: 235  VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
            + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 1027 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 1073



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1    MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
            ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 867  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 924

Query: 58   DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
              G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 925  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 983

Query: 118  LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
            L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 984  LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 1042

Query: 177  EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
            +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 1043 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 1102

Query: 235  VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
            + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 1103 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 1149



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1    MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
            ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 943  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 1000

Query: 58   DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
              G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 1001 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 1059

Query: 118  LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
            L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 1060 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 1118

Query: 177  EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
            +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 1119 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 1178

Query: 235  VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
            + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 1179 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 1225



 Score =  159 bits (402), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1    MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
            ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 1019 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 1076

Query: 58   DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
              G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 1077 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 1135

Query: 118  LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
            L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 1136 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 1194

Query: 177  EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
            +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 1195 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 1254

Query: 235  VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
            + +VK K+  + G  PD QRL+F  +QLE+ R L+ Y I  ES ++L
Sbjct: 1255 IENVKAKIQDKEGIPPDQQRLIFAGKQLENGRTLSDYNIQKESTLHL 1301



 Score =  132 bits (332), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/224 (37%), Positives = 131/224 (58%), Gaps = 5/224 (2%)

Query: 61  VMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDV 120
            M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL  
Sbjct: 16  TMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 74

Query: 121 LNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDC 179
            NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +  
Sbjct: 75  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQ 133

Query: 180 ELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRD 237
            L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +
Sbjct: 134 RLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIEN 193

Query: 238 VKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 194 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 237



 Score =  110 bits (275), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 75/219 (34%), Positives = 124/219 (56%), Gaps = 8/219 (3%)

Query: 1    MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
            ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 1095 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 1152

Query: 58   DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
              G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 1153 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 1211

Query: 118  LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
            L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 1212 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 1270

Query: 177  EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSI 215
            +   L   G+QL+N +TL+ Y+I++   L ++  ++  +
Sbjct: 1271 DQQRLIFAGKQLENGRTLSDYNIQKESTLHLVLRLRGGV 1309



 Score = 68.2 bits (165), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 35/73 (47%), Positives = 46/73 (63%)

Query: 209 RHVKHSIFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNL 268
           RH+   IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+F  +QLED R L
Sbjct: 13  RHLTMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 72

Query: 269 ASYKIVNESIVNL 281
           + Y I  ES ++L
Sbjct: 73  SDYNIQKESTLHL 85


>gi|56753927|gb|AAW25156.1| SJCHGC00176 protein [Schistosoma japonicum]
          Length = 457

 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 403 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449



 Score =  132 bits (332), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  108 bits (269), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 74/219 (33%), Positives = 124/219 (56%), Gaps = 8/219 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSI 215
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  +
Sbjct: 419 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGL 457


>gi|148237866|ref|NP_001079589.1| Polyubiquitin-C-like [Xenopus laevis]
 gi|27924422|gb|AAH45004.1| MGC53081 protein [Xenopus laevis]
 gi|226469790|emb|CAX76725.1| ubiquitin C [Schistosoma japonicum]
 gi|226473054|emb|CAX71213.1| ubiquitin C [Schistosoma japonicum]
          Length = 380

 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  107 bits (267), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 74/218 (33%), Positives = 123/218 (56%), Gaps = 8/218 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 380


>gi|297263833|ref|XP_002798871.1| PREDICTED: hypothetical protein LOC712934 isoform 2 [Macaca
           mulatta]
 gi|297263835|ref|XP_001102090.2| PREDICTED: hypothetical protein LOC712934 isoform 1 [Macaca
           mulatta]
 gi|297263839|ref|XP_002798873.1| PREDICTED: hypothetical protein LOC712934 isoform 4 [Macaca
           mulatta]
 gi|297263841|ref|XP_002798874.1| PREDICTED: hypothetical protein LOC712934 isoform 5 [Macaca
           mulatta]
 gi|297263843|ref|XP_002798875.1| PREDICTED: hypothetical protein LOC712934 isoform 6 [Macaca
           mulatta]
 gi|297263845|ref|XP_002798876.1| PREDICTED: hypothetical protein LOC712934 isoform 7 [Macaca
           mulatta]
 gi|297263847|ref|XP_002798877.1| PREDICTED: hypothetical protein LOC712934 isoform 8 [Macaca
           mulatta]
 gi|297263849|ref|XP_002798878.1| PREDICTED: hypothetical protein LOC712934 isoform 9 [Macaca
           mulatta]
 gi|402888093|ref|XP_003907411.1| PREDICTED: polyubiquitin-C isoform 1 [Papio anubis]
 gi|402888095|ref|XP_003907412.1| PREDICTED: polyubiquitin-C isoform 2 [Papio anubis]
 gi|402888097|ref|XP_003907413.1| PREDICTED: polyubiquitin-C isoform 3 [Papio anubis]
 gi|402888099|ref|XP_003907414.1| PREDICTED: polyubiquitin-C isoform 4 [Papio anubis]
 gi|402888101|ref|XP_003907415.1| PREDICTED: polyubiquitin-C isoform 5 [Papio anubis]
 gi|402888103|ref|XP_003907416.1| PREDICTED: polyubiquitin-C isoform 6 [Papio anubis]
 gi|402888105|ref|XP_003907417.1| PREDICTED: polyubiquitin-C isoform 7 [Papio anubis]
 gi|402888107|ref|XP_003907418.1| PREDICTED: polyubiquitin-C isoform 8 [Papio anubis]
 gi|402888109|ref|XP_003907419.1| PREDICTED: polyubiquitin-C isoform 9 [Papio anubis]
 gi|402888111|ref|XP_003907420.1| PREDICTED: polyubiquitin-C isoform 10 [Papio anubis]
 gi|441630368|ref|XP_004089541.1| PREDICTED: polyubiquitin-C [Nomascus leucogenys]
 gi|441630371|ref|XP_004089542.1| PREDICTED: polyubiquitin-C [Nomascus leucogenys]
          Length = 457

 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 403 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  108 bits (270), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 74/219 (33%), Positives = 124/219 (56%), Gaps = 8/219 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSI 215
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  +
Sbjct: 419 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGV 457


>gi|213982779|ref|NP_001135561.1| uncharacterized protein LOC100216108 [Xenopus (Silurana)
           tropicalis]
 gi|126323857|ref|XP_001366753.1| PREDICTED: polyubiquitin [Monodelphis domestica]
 gi|332254371|ref|XP_003276301.1| PREDICTED: polyubiquitin-C isoform 1 [Nomascus leucogenys]
 gi|332254373|ref|XP_003276302.1| PREDICTED: polyubiquitin-C isoform 2 [Nomascus leucogenys]
 gi|332254377|ref|XP_003276304.1| PREDICTED: polyubiquitin-C isoform 4 [Nomascus leucogenys]
 gi|332254379|ref|XP_003276305.1| PREDICTED: polyubiquitin-C isoform 5 [Nomascus leucogenys]
 gi|441630332|ref|XP_004089532.1| PREDICTED: polyubiquitin-C [Nomascus leucogenys]
 gi|441630335|ref|XP_004089533.1| PREDICTED: polyubiquitin-C [Nomascus leucogenys]
 gi|441630338|ref|XP_004089534.1| PREDICTED: polyubiquitin-C [Nomascus leucogenys]
 gi|441630344|ref|XP_004089536.1| PREDICTED: polyubiquitin-C [Nomascus leucogenys]
 gi|441630354|ref|XP_004089537.1| PREDICTED: polyubiquitin-C [Nomascus leucogenys]
 gi|441630357|ref|XP_004089538.1| PREDICTED: polyubiquitin-C [Nomascus leucogenys]
 gi|441630362|ref|XP_004089539.1| PREDICTED: polyubiquitin-C [Nomascus leucogenys]
 gi|441630365|ref|XP_004089540.1| PREDICTED: polyubiquitin-C [Nomascus leucogenys]
 gi|119618869|gb|EAW98463.1| ubiquitin C, isoform CRA_a [Homo sapiens]
 gi|119618870|gb|EAW98464.1| ubiquitin C, isoform CRA_a [Homo sapiens]
 gi|119618871|gb|EAW98465.1| ubiquitin C, isoform CRA_a [Homo sapiens]
 gi|119618872|gb|EAW98466.1| ubiquitin C, isoform CRA_a [Homo sapiens]
 gi|195539774|gb|AAI68051.1| Unknown (protein for MGC:185560) [Xenopus (Silurana) tropicalis]
 gi|444434915|dbj|BAM77032.1| ubiquitin C [Homo sapiens]
          Length = 533

 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 403 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 419 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 478

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 479 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 525



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  108 bits (270), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 74/219 (33%), Positives = 124/219 (56%), Gaps = 8/219 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 319 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 377 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 435

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 436 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 494

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSI 215
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  +
Sbjct: 495 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGV 533


>gi|452820028|gb|EME27076.1| ubiquitin [Galdieria sulphuraria]
          Length = 306

 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKSKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  132 bits (332), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKSKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  107 bits (266), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 74/216 (34%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEPSDTIENVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKSKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 302


>gi|347966903|ref|XP_550846.3| AGAP001971-PA [Anopheles gambiae str. PEST]
 gi|333469848|gb|EAL38503.3| AGAP001971-PA [Anopheles gambiae str. PEST]
          Length = 1065

 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 403 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 419 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 478

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 479 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 525



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 319 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 377 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 435

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 436 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 494

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 495 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 554

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 555 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 601



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 395 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 452

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 453 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 511

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 512 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 570

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 571 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 630

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 631 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 677



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 471 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 528

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 529 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 587

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 588 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 646

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 647 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 706

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 707 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 753



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 547 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 604

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 605 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 663

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 664 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 722

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 723 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 782

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 783 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 829



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 623 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 680

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 681 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 739

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 740 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 798

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 799 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 858

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 859 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 905



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 699 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 756

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 757 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 815

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 816 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 874

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 875 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 934

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 935 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 981



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1    MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
            ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 775  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 832

Query: 58   DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
              G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 833  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 891

Query: 118  LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
            L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 892  LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 950

Query: 177  EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
            +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 951  DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 1010

Query: 235  VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
            + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 1011 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 1057



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  107 bits (267), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 74/218 (33%), Positives = 123/218 (56%), Gaps = 8/218 (3%)

Query: 1    MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
            ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 851  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 908

Query: 58   DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
              G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 909  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 967

Query: 118  LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
            L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 968  LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 1026

Query: 177  EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
            +   L   G+QL++ +TL+ Y+I++   L ++  ++  
Sbjct: 1027 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 1064


>gi|350592414|ref|XP_003483459.1| PREDICTED: polyubiquitin-C isoform 1 [Sus scrofa]
 gi|350592416|ref|XP_003483460.1| PREDICTED: polyubiquitin-C isoform 2 [Sus scrofa]
 gi|350592418|ref|XP_003483461.1| PREDICTED: polyubiquitin-C isoform 3 [Sus scrofa]
 gi|350592420|ref|XP_003483462.1| PREDICTED: polyubiquitin-C isoform 4 [Sus scrofa]
 gi|302595945|sp|P0CG68.1|UBC_PIG RecName: Full=Polyubiquitin-C; Contains: RecName:
           Full=Ubiquitin-related; Contains: RecName:
           Full=Ubiquitin; Flags: Precursor
          Length = 533

 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 403 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 419 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 478

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 479 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 525



 Score =  160 bits (406), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKGKIQEK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKGKIQEKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  107 bits (267), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 74/218 (33%), Positives = 123/218 (56%), Gaps = 8/218 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 319 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 377 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 435

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 436 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 494

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  
Sbjct: 495 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 532


>gi|226469794|emb|CAX76727.1| polyubiquitin [Schistosoma japonicum]
 gi|226473062|emb|CAX71217.1| polyubiquitin [Schistosoma japonicum]
 gi|226473066|emb|CAX71219.1| polyubiquitin [Schistosoma japonicum]
          Length = 304

 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  107 bits (267), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 74/216 (34%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 302


>gi|223646766|gb|ACN10141.1| Ubiquitin [Salmo salar]
 gi|223649344|gb|ACN11430.1| Ubiquitin [Salmo salar]
 gi|223672621|gb|ACN12492.1| Ubiquitin [Salmo salar]
          Length = 457

 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 403 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  107 bits (267), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 74/218 (33%), Positives = 123/218 (56%), Gaps = 8/218 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  
Sbjct: 419 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 456


>gi|195125345|ref|XP_002007139.1| GI12770 [Drosophila mojavensis]
 gi|193918748|gb|EDW17615.1| GI12770 [Drosophila mojavensis]
          Length = 991

 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 403 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 419 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 478

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 479 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 525



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 319 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 377 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 435

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 436 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 494

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 495 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 554

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 555 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 601



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 395 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 452

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 453 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 511

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 512 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 570

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 571 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 630

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 631 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 677



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 471 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 528

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 529 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 587

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 588 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 646

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 647 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 706

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 707 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 753



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 547 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 604

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 605 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 663

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 664 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 722

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 723 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 782

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 783 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 829



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 623 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 680

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 681 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 739

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 740 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 798

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 799 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 858

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 859 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 905



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 699 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 756

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 757 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 815

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 816 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 874

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 875 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 934

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 935 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 981



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  107 bits (267), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 74/216 (34%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 775 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 832

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 833 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 891

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 892 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 950

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 951 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 986


>gi|47682711|gb|AAH69831.1| Zgc:172187 protein [Danio rerio]
 gi|62530956|gb|AAH93444.1| Zgc:172187 protein [Danio rerio]
          Length = 624

 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 29  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 86

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 87  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 145

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 146 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 204

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 205 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 264

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 265 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 311



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 105 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 162

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 163 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 221

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 222 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 280

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 281 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 340

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 341 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 387



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 181 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 238

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 239 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 297

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 298 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 356

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 357 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 416

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 417 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 463



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 257 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 314

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 315 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 373

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 374 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 432

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 433 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 492

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 493 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 539



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 333 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 390

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 391 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 449

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 450 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 508

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 509 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 568

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 569 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 615



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/224 (37%), Positives = 131/224 (58%), Gaps = 5/224 (2%)

Query: 61  VMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDV 120
            M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL  
Sbjct: 14  TMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 72

Query: 121 LNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDC 179
            NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +  
Sbjct: 73  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQ 131

Query: 180 ELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRD 237
            L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +
Sbjct: 132 RLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIEN 191

Query: 238 VKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 192 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 235



 Score =  107 bits (267), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 74/216 (34%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 409 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 466

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 467 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 525

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 526 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 584

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 585 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 620


>gi|443688720|gb|ELT91320.1| hypothetical protein CAPTEDRAFT_162204 [Capitella teleta]
          Length = 457

 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 403 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  107 bits (267), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 74/218 (33%), Positives = 123/218 (56%), Gaps = 8/218 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  
Sbjct: 419 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 456


>gi|194762588|ref|XP_001963416.1| GF20300 [Drosophila ananassae]
 gi|190629075|gb|EDV44492.1| GF20300 [Drosophila ananassae]
 gi|389610665|dbj|BAM18944.1| ubiquitin [Papilio polytes]
          Length = 610

 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 403 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 419 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 478

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 479 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 525



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 319 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 377 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 435

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 436 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 494

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 495 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 554

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 555 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 601



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  107 bits (267), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 74/220 (33%), Positives = 123/220 (55%), Gaps = 8/220 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 395 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 452

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 453 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 511

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 512 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 570

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSIF 216
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    
Sbjct: 571 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGAL 610


>gi|157138587|ref|XP_001664266.1| ubiquitin [Aedes aegypti]
 gi|108880554|gb|EAT44779.1| AAEL003877-PA [Aedes aegypti]
          Length = 761

 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 403 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 419 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 478

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 479 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 525



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 319 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 377 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 435

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 436 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 494

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 495 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 554

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 555 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 601



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 395 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 452

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 453 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 511

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 512 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 570

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 571 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 630

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 631 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 677



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 471 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 528

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 529 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 587

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 588 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 646

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 647 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 706

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 707 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 753



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  107 bits (267), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 74/218 (33%), Positives = 123/218 (56%), Gaps = 8/218 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 547 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 604

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 605 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 663

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 664 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 722

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  
Sbjct: 723 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 760


>gi|2627131|dbj|BAA23487.1| polyubiquitin [Cricetulus griseus]
          Length = 886

 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 403 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 419 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 478

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 479 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 525



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 319 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 377 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 435

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 436 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 494

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 495 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 554

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 555 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 601



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 395 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 452

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 453 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 511

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 512 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 570

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 571 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 630

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 631 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 677



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 471 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 528

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 529 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 587

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 588 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 646

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 647 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 706

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 707 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 753



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 547 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 604

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 605 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 663

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 664 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 722

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 723 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 782

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 783 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 829



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  123 bits (309), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 86/245 (35%), Positives = 139/245 (56%), Gaps = 10/245 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 623 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 680

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 681 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 739

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 740 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 798

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   +T
Sbjct: 799 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSNT 858

Query: 235 VRDVK 239
           ++  K
Sbjct: 859 IKKSK 863


>gi|195042539|ref|XP_001991451.1| GH12661 [Drosophila grimshawi]
 gi|193901209|gb|EDW00076.1| GH12661 [Drosophila grimshawi]
          Length = 699

 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 403 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 419 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 478

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 479 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 525



 Score =  159 bits (402), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 106/283 (37%), Positives = 163/283 (57%), Gaps = 10/283 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 319 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 377 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 435

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 436 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 494

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 495 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 554

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNES 277
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES
Sbjct: 555 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 597



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221


>gi|30060222|gb|AAP13102.1| polyubiquitin, partial [Schistosoma japonicum]
          Length = 340

 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  129 bits (323), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 89/248 (35%), Positives = 142/248 (57%), Gaps = 10/248 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 326

Query: 235 VRDVKDKL 242
           + +VK K+
Sbjct: 327 IENVKAKI 334



 Score = 90.5 bits (223), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 63/172 (36%), Positives = 98/172 (56%), Gaps = 7/172 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVE 168
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQ 335



 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/101 (39%), Positives = 60/101 (59%), Gaps = 6/101 (5%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGI 98
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGI
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGI 340


>gi|346986300|ref|NP_001231307.1| polyubiquitin [Cricetulus griseus]
 gi|2627133|dbj|BAA23488.1| polyubiquitin [Cricetulus griseus]
          Length = 1038

 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 403 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 419 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 478

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 479 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 525



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 623 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 680

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 681 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 739

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 740 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 798

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 799 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 858

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 859 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 905



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 699 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 756

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 757 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 815

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 816 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 874

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 875 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 934

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 935 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 981



 Score =  160 bits (405), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 395 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 452

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 453 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 511

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 512 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 570

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y++++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 571 DQQRLIFAGKQLEDGRTLSDYNVQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 630

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 631 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 677



 Score =  160 bits (405), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 471 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 528

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 529 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 587

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   N+  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 588 LSDYNVQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 646

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 647 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 706

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 707 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 753



 Score =  160 bits (405), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY +   S +H    
Sbjct: 547 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNVQKESTLHLVLR 604

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 605 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 663

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 664 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 722

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 723 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 782

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 783 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 829



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  123 bits (309), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 86/245 (35%), Positives = 139/245 (56%), Gaps = 10/245 (4%)

Query: 1    MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
            ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 775  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 832

Query: 58   DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
              G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 833  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 891

Query: 118  LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
            L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 892  LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 950

Query: 177  EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
            +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   +T
Sbjct: 951  DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSNT 1010

Query: 235  VRDVK 239
            ++  K
Sbjct: 1011 IKKSK 1015


>gi|340374850|ref|XP_003385950.1| PREDICTED: polyubiquitin-like [Amphimedon queenslandica]
          Length = 381

 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  107 bits (267), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 74/218 (33%), Positives = 123/218 (56%), Gaps = 8/218 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 380


>gi|195164963|ref|XP_002023315.1| GL20284 [Drosophila persimilis]
 gi|194105420|gb|EDW27463.1| GL20284 [Drosophila persimilis]
          Length = 382

 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  107 bits (267), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 74/220 (33%), Positives = 123/220 (55%), Gaps = 8/220 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSIF 216
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGAL 382


>gi|195399337|ref|XP_002058277.1| GJ16000 [Drosophila virilis]
 gi|194150701|gb|EDW66385.1| GJ16000 [Drosophila virilis]
          Length = 457

 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 403 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  107 bits (267), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 74/218 (33%), Positives = 123/218 (56%), Gaps = 8/218 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  
Sbjct: 419 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 456


>gi|156358687|ref|XP_001624647.1| predicted protein [Nematostella vectensis]
 gi|170055263|ref|XP_001863505.1| polyubiquitin [Culex quinquefasciatus]
 gi|156211440|gb|EDO32547.1| predicted protein [Nematostella vectensis]
 gi|167875249|gb|EDS38632.1| polyubiquitin [Culex quinquefasciatus]
          Length = 533

 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 403 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 419 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 478

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 479 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 525



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  107 bits (267), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 74/218 (33%), Positives = 123/218 (56%), Gaps = 8/218 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 319 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 377 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 435

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 436 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 494

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  
Sbjct: 495 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 532


>gi|334324804|ref|XP_001373422.2| PREDICTED: polyubiquitin-C-like [Monodelphis domestica]
          Length = 761

 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 403 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 419 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 478

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 479 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 525



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 319 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 377 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 435

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 436 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 494

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 495 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 554

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 555 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 601



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 395 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 452

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 453 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 511

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 512 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 570

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 571 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 630

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 631 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 677



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 471 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 528

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 529 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 587

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 588 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 646

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 647 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 706

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 707 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 753



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  107 bits (267), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 74/218 (33%), Positives = 123/218 (56%), Gaps = 8/218 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 547 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 604

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 605 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 663

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 664 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 722

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  
Sbjct: 723 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 760


>gi|270010560|gb|EFA07008.1| hypothetical protein TcasGA2_TC009978 [Tribolium castaneum]
          Length = 685

 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 403 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 419 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 478

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 479 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 525



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 319 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 377 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 435

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 436 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 494

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 495 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 554

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 555 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 601



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 395 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 452

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 453 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 511

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 512 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 570

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 571 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 630

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 631 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 677



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  107 bits (267), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 74/218 (33%), Positives = 123/218 (56%), Gaps = 8/218 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 471 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 528

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 529 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 587

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 588 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 646

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  
Sbjct: 647 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 684


>gi|209738556|gb|ACI70147.1| Ubiquitin [Salmo salar]
          Length = 381

 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  107 bits (267), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 74/216 (34%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 378


>gi|24640086|ref|NP_727078.1| Ubiquitin-5E [Drosophila melanogaster]
 gi|194896187|ref|XP_001978429.1| GG17684 [Drosophila erecta]
 gi|22831806|gb|AAF46142.3| Ubiquitin-5E [Drosophila melanogaster]
 gi|190650078|gb|EDV47356.1| GG17684 [Drosophila erecta]
 gi|208879484|gb|ACI31287.1| GH17761p [Drosophila melanogaster]
          Length = 534

 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 403 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 419 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 478

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 479 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 525



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  107 bits (267), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 74/216 (34%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 319 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 377 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 435

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 436 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 494

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 495 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 530


>gi|346986309|ref|NP_001231310.1| polyubiquitin [Cricetulus griseus]
 gi|2118958|pir||S21083 polyubiquitin 5 - Chinese hamster
 gi|49477|emb|CAA42941.1| polyubiquitin [Cricetulus griseus]
 gi|25991946|gb|AAN76999.1| poly-ubiquitin [Biomphalaria glabrata]
          Length = 381

 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  107 bits (267), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 74/218 (33%), Positives = 123/218 (56%), Gaps = 8/218 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 380


>gi|323714263|ref|NP_001071272.2| ubuquitin c [Danio rerio]
          Length = 533

 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 403 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 419 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 478

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 479 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 525



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  107 bits (267), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 74/218 (33%), Positives = 123/218 (56%), Gaps = 8/218 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 319 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 377 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 435

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 436 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 494

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  
Sbjct: 495 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 532


>gi|195011548|ref|XP_001983203.1| GH15714 [Drosophila grimshawi]
 gi|193896685|gb|EDV95551.1| GH15714 [Drosophila grimshawi]
          Length = 535

 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 403 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 419 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 478

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 479 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 525



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  107 bits (267), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 74/216 (34%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 319 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 377 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 435

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 436 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 494

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 495 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 530


>gi|410914740|ref|XP_003970845.1| PREDICTED: polyubiquitin-B-like isoform 1 [Takifugu rubripes]
 gi|410914742|ref|XP_003970846.1| PREDICTED: polyubiquitin-B-like isoform 2 [Takifugu rubripes]
 gi|221222312|gb|ACM09817.1| Ubiquitin [Salmo salar]
 gi|334362439|gb|AEG78418.1| Ubiquitin C variant 2 [Epinephelus coioides]
          Length = 305

 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  107 bits (267), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 74/216 (34%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 302


>gi|58618886|gb|AAH89218.1| Ubc protein, partial [Rattus norvegicus]
          Length = 656

 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 13  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 70

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 71  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 129

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 130 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 188

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 189 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 248

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 249 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 295



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 89  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 146

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 147 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 205

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 206 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 264

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 265 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 324

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 325 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 371



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 165 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 222

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 223 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 281

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 282 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 340

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 341 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 400

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 401 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 447



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 241 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 298

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 299 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 357

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 358 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 416

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 417 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 476

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 477 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 523



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 317 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 374

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 375 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 433

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 434 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 492

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 493 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 552

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 553 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 599



 Score =  129 bits (324), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 83/221 (37%), Positives = 129/221 (58%), Gaps = 5/221 (2%)

Query: 64  LYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNI 123
           ++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   NI
Sbjct: 1   IFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 59

Query: 124 NNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELF 182
             E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L 
Sbjct: 60  QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQRLI 118

Query: 183 RGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKD 240
             G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK 
Sbjct: 119 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 178

Query: 241 KLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 219



 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 85/245 (34%), Positives = 137/245 (55%), Gaps = 10/245 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 393 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 450

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 451 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 509

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 510 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 568

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I L+V     
Sbjct: 569 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSVN 628

Query: 235 VRDVK 239
            + VK
Sbjct: 629 TKKVK 633



 Score = 84.7 bits (208), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 61/169 (36%), Positives = 94/169 (55%), Gaps = 7/169 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 469 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 526

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 527 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 585

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKK 165
           L   NI  E TL ++   +   +IFV+T T  T+ L+V  +     VK+
Sbjct: 586 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSVNTKKVKQ 634


>gi|357611679|gb|EHJ67605.1| Ubc protein [Danaus plexippus]
          Length = 381

 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 75/219 (34%), Positives = 124/219 (56%), Gaps = 8/219 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSI 215
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  I
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGI 381


>gi|327291982|ref|XP_003230699.1| PREDICTED: polyubiquitin-C-like [Anolis carolinensis]
          Length = 685

 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 403 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 419 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 478

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 479 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 525



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 319 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 377 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 435

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 436 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 494

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 495 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 554

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 555 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 601



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 395 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 452

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 453 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 511

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 512 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 570

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 571 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 630

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 631 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 677



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  107 bits (267), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 74/218 (33%), Positives = 123/218 (56%), Gaps = 8/218 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 471 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 528

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 529 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 587

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 588 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 646

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  
Sbjct: 647 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 684


>gi|51873890|gb|AAH80583.1| Unknown (protein for IMAGE:2822684), partial [Homo sapiens]
          Length = 698

 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 28  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 85

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 86  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 144

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 145 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 203

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 204 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 263

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 264 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 310



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 104 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 161

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 162 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 220

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 221 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 279

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 280 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 339

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 340 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 386



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 180 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 237

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 238 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 296

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 297 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 355

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 356 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 415

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 416 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 462



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 256 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 313

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 314 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 372

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 373 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 431

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 432 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 491

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 492 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 538



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 332 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 389

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 390 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 448

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 449 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 507

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 508 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 567

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 568 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 614



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 408 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 465

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 466 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 524

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 525 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 583

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 584 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 643

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 644 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 690



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/224 (37%), Positives = 131/224 (58%), Gaps = 5/224 (2%)

Query: 61  VMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDV 120
            M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL  
Sbjct: 13  TMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 71

Query: 121 LNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDC 179
            NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +  
Sbjct: 72  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQ 130

Query: 180 ELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRD 237
            L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +
Sbjct: 131 RLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIEN 190

Query: 238 VKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 191 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 234



 Score =  108 bits (270), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 74/219 (33%), Positives = 124/219 (56%), Gaps = 8/219 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 484 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 541

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 542 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 600

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 601 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 659

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSI 215
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  +
Sbjct: 660 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGV 698



 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 35/73 (47%), Positives = 46/73 (63%)

Query: 209 RHVKHSIFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNL 268
           RH+   IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+F  +QLED R L
Sbjct: 10  RHLTMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 69

Query: 269 ASYKIVNESIVNL 281
           + Y I  ES ++L
Sbjct: 70  SDYNIQKESTLHL 82


>gi|226477470|emb|CAX72429.1| ubiquitin C [Schistosoma japonicum]
 gi|226477472|emb|CAX72430.1| ubiquitin C [Schistosoma japonicum]
 gi|226477474|emb|CAX72431.1| ubiquitin C [Schistosoma japonicum]
 gi|226477476|emb|CAX72432.1| ubiquitin C [Schistosoma japonicum]
 gi|226477478|emb|CAX72433.1| ubiquitin C [Schistosoma japonicum]
 gi|226477480|emb|CAX72434.1| ubiquitin C [Schistosoma japonicum]
 gi|226484001|emb|CAX79669.1| ubiquitin C [Schistosoma japonicum]
 gi|226484003|emb|CAX79670.1| ubiquitin C [Schistosoma japonicum]
 gi|226484055|emb|CAX79696.1| ubiquitin C [Schistosoma japonicum]
 gi|226484057|emb|CAX79697.1| ubiquitin C [Schistosoma japonicum]
 gi|226484059|emb|CAX79698.1| ubiquitin C [Schistosoma japonicum]
 gi|226484063|emb|CAX79700.1| ubiquitin C [Schistosoma japonicum]
 gi|226484065|emb|CAX79701.1| ubiquitin C [Schistosoma japonicum]
 gi|226484067|emb|CAX79702.1| ubiquitin C [Schistosoma japonicum]
 gi|226484069|emb|CAX79703.1| ubiquitin C [Schistosoma japonicum]
 gi|226484071|emb|CAX79704.1| ubiquitin C [Schistosoma japonicum]
 gi|226484073|emb|CAX79705.1| ubiquitin C [Schistosoma japonicum]
 gi|226484075|emb|CAX79706.1| ubiquitin C [Schistosoma japonicum]
 gi|226484077|emb|CAX79707.1| ubiquitin C [Schistosoma japonicum]
 gi|226484079|emb|CAX79708.1| ubiquitin C [Schistosoma japonicum]
 gi|226484083|emb|CAX79710.1| ubiquitin C [Schistosoma japonicum]
 gi|226484311|emb|CAX79711.1| ubiquitin C [Schistosoma japonicum]
 gi|226484870|emb|CAX79712.1| ubiquitin C [Schistosoma japonicum]
          Length = 305

 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  108 bits (269), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 74/219 (33%), Positives = 124/219 (56%), Gaps = 8/219 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSI 215
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  +
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGL 305


>gi|195448336|ref|XP_002071613.1| GK10077 [Drosophila willistoni]
 gi|194167698|gb|EDW82599.1| GK10077 [Drosophila willistoni]
          Length = 610

 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 403 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 419 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 478

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 479 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 525



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 319 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 377 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 435

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 436 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 494

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 495 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 554

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 555 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 601



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  110 bits (274), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 75/220 (34%), Positives = 124/220 (56%), Gaps = 8/220 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 395 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 452

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 453 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 511

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 512 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 570

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSIF 216
           +   L   G+QL++ +TL+ Y+I++   L ++  ++   F
Sbjct: 571 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGAF 610


>gi|195137906|ref|XP_002012597.1| GI14272 [Drosophila mojavensis]
 gi|193906411|gb|EDW05278.1| GI14272 [Drosophila mojavensis]
          Length = 668

 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 403 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 419 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 478

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 479 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 525



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 319 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 377 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 435

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 436 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 494

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 495 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 554

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 555 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 601



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  107 bits (267), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 74/218 (33%), Positives = 123/218 (56%), Gaps = 8/218 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 395 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 452

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 453 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 511

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 512 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 570

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  
Sbjct: 571 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 608


>gi|170034793|ref|XP_001845257.1| conserved hypothetical protein [Culex quinquefasciatus]
 gi|167876387|gb|EDS39770.1| conserved hypothetical protein [Culex quinquefasciatus]
          Length = 1065

 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 403 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 419 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 478

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 479 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 525



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 319 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 377 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 435

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 436 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 494

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 495 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 554

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 555 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 601



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 395 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 452

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 453 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 511

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 512 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 570

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 571 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 630

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 631 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 677



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 471 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 528

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 529 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 587

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 588 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 646

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 647 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 706

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 707 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 753



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 547 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 604

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 605 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 663

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 664 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 722

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 723 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 782

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 783 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 829



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 623 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 680

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 681 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 739

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 740 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 798

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 799 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 858

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 859 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 905



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 699 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 756

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 757 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 815

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 816 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 874

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 875 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 934

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 935 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 981



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1    MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
            ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 775  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 832

Query: 58   DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
              G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 833  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 891

Query: 118  LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
            L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 892  LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 950

Query: 177  EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
            +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 951  DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 1010

Query: 235  VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
            + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 1011 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 1057



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  107 bits (267), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 74/218 (33%), Positives = 123/218 (56%), Gaps = 8/218 (3%)

Query: 1    MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
            ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 851  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 908

Query: 58   DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
              G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 909  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 967

Query: 118  LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
            L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 968  LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 1026

Query: 177  EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
            +   L   G+QL++ +TL+ Y+I++   L ++  ++  
Sbjct: 1027 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 1064


>gi|185135461|ref|NP_001117778.1| polyubiquitin [Oncorhynchus mykiss]
 gi|157110833|ref|XP_001651266.1| ubiquitin [Aedes aegypti]
 gi|13991678|gb|AAK51460.1|AF361365_1 polyubiquitin [Oncorhynchus mykiss]
 gi|108883867|gb|EAT48092.1| AAEL000795-PA [Aedes aegypti]
 gi|209149518|gb|ACI32978.1| Ubiquitin [Salmo salar]
 gi|209737152|gb|ACI69445.1| Ubiquitin [Salmo salar]
          Length = 305

 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  107 bits (267), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 74/216 (34%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 302


>gi|321469467|gb|EFX80447.1| hypothetical protein DAPPUDRAFT_243700 [Daphnia pulex]
          Length = 764

 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 403 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 419 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 478

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 479 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 525



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 319 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 377 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 435

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 436 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 494

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 495 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 554

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 555 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 601



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 395 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 452

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 453 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 511

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 512 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 570

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 571 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 630

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 631 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 677



 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 471 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 528

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 529 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 587

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 588 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 646

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 647 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 706

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 707 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 753



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  107 bits (267), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 74/216 (34%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 547 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 604

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 605 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 663

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 664 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 722

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 723 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 758


>gi|329665078|ref|NP_001193236.1| polyubiquitin-C [Bos taurus]
 gi|302595881|sp|P0CH28.1|UBC_BOVIN RecName: Full=Polyubiquitin-C; Contains: RecName:
           Full=Ubiquitin-related; Contains: RecName:
           Full=Ubiquitin; Flags: Precursor
          Length = 690

 Score =  160 bits (406), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  160 bits (406), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 403 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449



 Score =  160 bits (406), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 419 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 478

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 479 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 525



 Score =  160 bits (406), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 319 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 377 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 435

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 436 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 494

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 495 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 554

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 555 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 601



 Score =  160 bits (406), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 395 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 452

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 453 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 511

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 512 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 570

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 571 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 630

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 631 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 677



 Score =  160 bits (405), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKGKIQEK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKGKIQEKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 74/220 (33%), Positives = 124/220 (56%), Gaps = 8/220 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 471 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 528

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 529 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 587

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 588 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 646

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSIF 216
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  + 
Sbjct: 647 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGVL 686


>gi|6755919|ref|NP_035794.1| polyubiquitin-B [Mus musculus]
 gi|20302085|ref|NP_620250.1| polyubiquitin-B precursor [Rattus norvegicus]
 gi|147904884|ref|NP_001090433.1| uncharacterized protein LOC779345 [Xenopus laevis]
 gi|302595873|sp|P0CG62.1|UBB_CHICK RecName: Full=Polyubiquitin-B; Contains: RecName: Full=Ubiquitin;
           Flags: Precursor
 gi|302595876|sp|P0CG49.1|UBB_MOUSE RecName: Full=Polyubiquitin-B; Contains: RecName: Full=Ubiquitin;
           Flags: Precursor
 gi|302595879|sp|P0CG51.1|UBB_RAT RecName: Full=Polyubiquitin-B; Contains: RecName: Full=Ubiquitin;
           Flags: Precursor
 gi|2118966|pir||I50437 polyubiquitin 4 - chicken
 gi|55118|emb|CAA35999.1| ubiquitin [Mus musculus]
 gi|212849|gb|AAA49128.1| ubiquitin I [Gallus gallus]
 gi|471156|dbj|BAA03983.1| polyubiquitin [Rattus norvegicus]
 gi|12840717|dbj|BAB24930.1| unnamed protein product [Mus musculus]
 gi|12845838|dbj|BAB26919.1| unnamed protein product [Mus musculus]
 gi|12846202|dbj|BAB27071.1| unnamed protein product [Mus musculus]
 gi|12850137|dbj|BAB28606.1| unnamed protein product [Mus musculus]
 gi|37805416|gb|AAH60312.1| Ubiquitin B [Rattus norvegicus]
 gi|47477820|gb|AAH70919.1| Ubiquitin B [Rattus norvegicus]
 gi|71682472|gb|AAI00342.1| Ubiquitin B [Mus musculus]
 gi|74210110|dbj|BAE21330.1| unnamed protein product [Mus musculus]
 gi|89891988|gb|ABD78846.1| ubiquitin C I [Anser anser]
 gi|116487680|gb|AAI26016.1| MGC154789 protein [Xenopus laevis]
 gi|148678404|gb|EDL10351.1| mCG23377, isoform CRA_a [Mus musculus]
 gi|197693972|gb|ACH71654.1| ubiquitin C [Columba livia]
          Length = 305

 Score =  160 bits (406), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  107 bits (267), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 74/218 (33%), Positives = 123/218 (56%), Gaps = 8/218 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 304


>gi|149535948|ref|XP_001508553.1| PREDICTED: polyubiquitin-C-like [Ornithorhynchus anatinus]
 gi|149641796|ref|XP_001508904.1| PREDICTED: polyubiquitin-C-like [Ornithorhynchus anatinus]
 gi|301770987|ref|XP_002920911.1| PREDICTED: hypothetical protein LOC100483436 isoform 1 [Ailuropoda
           melanoleuca]
 gi|301770989|ref|XP_002920912.1| PREDICTED: hypothetical protein LOC100483436 isoform 2 [Ailuropoda
           melanoleuca]
 gi|197129062|gb|ACH45560.1| putative ubiquitin C variant 7 [Taeniopygia guttata]
 gi|197129063|gb|ACH45561.1| putative ubiquitin C variant 7 [Taeniopygia guttata]
          Length = 381

 Score =  160 bits (406), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  160 bits (406), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  107 bits (267), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 74/218 (33%), Positives = 123/218 (56%), Gaps = 8/218 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 380


>gi|12849189|dbj|BAB28242.1| unnamed protein product [Mus musculus]
          Length = 305

 Score =  160 bits (406), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVFRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  131 bits (330), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVFRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  107 bits (267), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 74/216 (34%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVFR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 302


>gi|8394502|ref|NP_059010.1| polyubiquitin-C precursor [Rattus norvegicus]
 gi|81872124|sp|Q63429.1|UBC_RAT RecName: Full=Polyubiquitin-C; Contains: RecName: Full=Ubiquitin;
           Contains: RecName: Full=Ubiquitin-related; Flags:
           Precursor
 gi|471154|dbj|BAA04129.1| polyubiquitin [Rattus norvegicus]
          Length = 810

 Score =  160 bits (406), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  160 bits (406), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  160 bits (406), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 403 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449



 Score =  160 bits (406), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 419 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 478

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 479 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 525



 Score =  160 bits (406), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 319 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 377 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 435

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 436 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 494

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 495 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 554

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 555 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 601



 Score =  160 bits (406), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 395 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 452

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 453 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 511

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 512 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 570

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 571 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 630

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 631 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 677



 Score =  160 bits (406), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 471 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 528

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 529 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 587

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 588 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 646

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 647 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 706

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 707 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 753



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  120 bits (302), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 86/245 (35%), Positives = 137/245 (55%), Gaps = 10/245 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 547 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 604

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 605 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 663

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 664 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 722

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV     
Sbjct: 723 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSVN 782

Query: 235 VRDVK 239
            + VK
Sbjct: 783 TKKVK 787



 Score = 85.9 bits (211), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 62/169 (36%), Positives = 94/169 (55%), Gaps = 7/169 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 623 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 680

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 681 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 739

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKK 165
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  +     VK+
Sbjct: 740 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSVNTKKVKQ 788


>gi|389608337|dbj|BAM17780.1| ubiquitin [Papilio xuthus]
          Length = 306

 Score =  160 bits (406), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 74/220 (33%), Positives = 124/220 (56%), Gaps = 8/220 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSIF 216
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  + 
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGVL 306


>gi|19483857|gb|AAH25894.1| Ubc protein [Mus musculus]
 gi|23958188|gb|AAH36303.1| Ubc protein [Mus musculus]
 gi|26372121|dbj|BAB27296.2| unnamed protein product [Mus musculus]
 gi|62825885|gb|AAH94012.1| Ubc protein [Mus musculus]
          Length = 354

 Score =  160 bits (406), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  131 bits (330), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  121 bits (303), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 86/245 (35%), Positives = 138/245 (56%), Gaps = 10/245 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I L+V    T
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSVT 326

Query: 235 VRDVK 239
            + VK
Sbjct: 327 TKKVK 331



 Score = 86.7 bits (213), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 62/169 (36%), Positives = 95/169 (56%), Gaps = 7/169 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKK 165
           L   NI  E TL ++   +   +IFV+T T  T+ L+V  + T   VK+
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSVTTKKVKQ 332


>gi|308512652|gb|ADO32981.1| polyubiquitin [Eriocheir sinensis]
 gi|325556934|gb|ADZ28743.1| ubiquitin C [Eriocheir sinensis]
          Length = 305

 Score =  160 bits (406), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  107 bits (268), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 74/219 (33%), Positives = 124/219 (56%), Gaps = 8/219 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSI 215
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  +
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 305


>gi|223646702|gb|ACN10109.1| Ubiquitin [Salmo salar]
 gi|223672553|gb|ACN12458.1| Ubiquitin [Salmo salar]
          Length = 305

 Score =  160 bits (406), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  107 bits (267), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 74/212 (34%), Positives = 121/212 (57%), Gaps = 8/212 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQII 208
           +   L   G+QL++ +TL+ Y+I++   L ++
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298


>gi|13879398|gb|AAH06680.1| Ubc protein [Mus musculus]
          Length = 582

 Score =  160 bits (406), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  160 bits (406), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  160 bits (406), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 403 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449



 Score =  160 bits (406), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 419 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 478

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 479 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 525



 Score =  131 bits (330), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  121 bits (303), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 86/245 (35%), Positives = 138/245 (56%), Gaps = 10/245 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 319 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 377 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 435

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 436 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 494

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I L+V    T
Sbjct: 495 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSVT 554

Query: 235 VRDVK 239
            + VK
Sbjct: 555 TKKVK 559



 Score = 86.7 bits (213), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 62/169 (36%), Positives = 95/169 (56%), Gaps = 7/169 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 395 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 452

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 453 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 511

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKK 165
           L   NI  E TL ++   +   +IFV+T T  T+ L+V  + T   VK+
Sbjct: 512 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSVTTKKVKQ 560


>gi|195170771|ref|XP_002026185.1| GL16204 [Drosophila persimilis]
 gi|194111065|gb|EDW33108.1| GL16204 [Drosophila persimilis]
          Length = 307

 Score =  160 bits (406), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  108 bits (269), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 74/219 (33%), Positives = 124/219 (56%), Gaps = 8/219 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSI 215
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  +
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGV 305


>gi|38114661|gb|AAH08955.2| UBC protein, partial [Homo sapiens]
          Length = 546

 Score =  160 bits (406), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 28  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 85

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 86  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 144

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 145 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 203

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 204 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 263

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 264 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 310



 Score =  160 bits (406), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 104 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 161

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 162 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 220

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 221 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 279

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 280 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 339

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 340 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 386



 Score =  160 bits (406), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 180 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 237

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 238 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 296

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 297 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 355

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 356 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 415

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 416 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 462



 Score =  160 bits (406), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 256 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 313

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 314 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 372

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 373 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 431

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 432 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 491

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 492 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 538



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/224 (37%), Positives = 131/224 (58%), Gaps = 5/224 (2%)

Query: 61  VMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDV 120
            M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL  
Sbjct: 13  TMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 71

Query: 121 LNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDC 179
            NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +  
Sbjct: 72  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQ 130

Query: 180 ELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRD 237
            L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +
Sbjct: 131 RLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIEN 190

Query: 238 VKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 191 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 234



 Score =  108 bits (270), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 74/219 (33%), Positives = 124/219 (56%), Gaps = 8/219 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 332 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 389

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 390 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 448

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 449 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 507

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSI 215
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  +
Sbjct: 508 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGV 546



 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 35/73 (47%), Positives = 46/73 (63%)

Query: 209 RHVKHSIFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNL 268
           RH+   IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+F  +QLED R L
Sbjct: 10  RHLTMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 69

Query: 269 ASYKIVNESIVNL 281
           + Y I  ES ++L
Sbjct: 70  SDYNIQKESTLHL 82


>gi|157420221|gb|ABV55648.1| Ubc protein, partial [Penaeus monodon]
          Length = 432

 Score =  160 bits (406), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 66  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 123

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 124 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 182

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 183 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 241

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 242 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 301

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 302 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 348



 Score =  158 bits (399), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 165/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 142 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 199

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 200 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 258

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 259 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 317

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 318 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 377

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  E  ++L
Sbjct: 378 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEFTLHL 424



 Score =  156 bits (395), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 103/274 (37%), Positives = 158/274 (57%), Gaps = 10/274 (3%)

Query: 16  IHAKVE--EEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---NDSGVMKLYFKTPS 70
           + AK++  E I  D   L +AG+QLE+G T+ DY I   S +H      G M+++ KT +
Sbjct: 1   VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLT 60

Query: 71  NEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQ 130
             KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   NI  E TL 
Sbjct: 61  G-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 119

Query: 131 MISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQ 189
           ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL+
Sbjct: 120 LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQRLIFAGKQLE 178

Query: 190 NLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIG 247
           + +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G
Sbjct: 179 DGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG 238

Query: 248 QAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
             PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 239 IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 272



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 74/218 (33%), Positives = 123/218 (56%), Gaps = 8/218 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 218 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 275

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 276 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 334

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 335 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 393

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  
Sbjct: 394 DQQRLIFAGKQLEDGRTLSDYNIQKEFTLHLVLRLRGG 431


>gi|3789942|gb|AAC67552.1| polyubiquitin [Saccharum hybrid cultivar H32-8560]
          Length = 381

 Score =  160 bits (406), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D     +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKAKIQDK--EGIPPDQQRXIFAGKQLEDGRTLADYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++      P 
Sbjct: 208 LAXYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPD 267

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   +F  G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 268 QQRXIF-AGKQLEDGRTLAXYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 327 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 373



 Score =  159 bits (403), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +    + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRXIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLAXYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QR +F  +QLED R LA Y I  ES ++L
Sbjct: 251 IDNVKAKIQDKEGIPPDQQRXIFAGKQLEDGRTLAXYNIQKESTLHL 297



 Score =  132 bits (333), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 130/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++      P +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRX 119

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           +F  G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 120 IF-AGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAXYNIQKESTLHL 221



 Score =  104 bits (260), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 72/212 (33%), Positives = 119/212 (56%), Gaps = 8/212 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+  Y I   S +H    
Sbjct: 167 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLAXYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +    + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRXIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LAXYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQII 208
           +   L   G+QL++ +TLA Y+I++   L ++
Sbjct: 343 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 374


>gi|402888113|ref|XP_003907421.1| PREDICTED: polyubiquitin-C isoform 11 [Papio anubis]
 gi|402888115|ref|XP_003907422.1| PREDICTED: polyubiquitin-C isoform 12 [Papio anubis]
 gi|426374649|ref|XP_004054182.1| PREDICTED: polyubiquitin-B-like isoform 1 [Gorilla gorilla gorilla]
 gi|426374651|ref|XP_004054183.1| PREDICTED: polyubiquitin-B-like isoform 2 [Gorilla gorilla gorilla]
 gi|426374653|ref|XP_004054184.1| PREDICTED: polyubiquitin-B-like isoform 3 [Gorilla gorilla gorilla]
 gi|426374655|ref|XP_004054185.1| PREDICTED: polyubiquitin-B-like isoform 4 [Gorilla gorilla gorilla]
 gi|426374657|ref|XP_004054186.1| PREDICTED: polyubiquitin-B-like isoform 5 [Gorilla gorilla gorilla]
 gi|426374659|ref|XP_004054187.1| PREDICTED: polyubiquitin-B-like isoform 6 [Gorilla gorilla gorilla]
 gi|426374661|ref|XP_004054188.1| PREDICTED: polyubiquitin-B-like isoform 7 [Gorilla gorilla gorilla]
 gi|426374663|ref|XP_004054189.1| PREDICTED: polyubiquitin-B-like isoform 8 [Gorilla gorilla gorilla]
 gi|426374665|ref|XP_004054190.1| PREDICTED: polyubiquitin-B-like isoform 9 [Gorilla gorilla gorilla]
 gi|15928840|gb|AAH14880.1| UBC protein [Homo sapiens]
          Length = 305

 Score =  160 bits (406), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  108 bits (269), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 74/219 (33%), Positives = 124/219 (56%), Gaps = 8/219 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSI 215
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  +
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGV 305


>gi|350537449|ref|NP_001232759.1| putative ubiquitin C variant 5 [Taeniopygia guttata]
 gi|350537609|ref|NP_001232766.1| putative ubiquitin C variant 14 [Taeniopygia guttata]
 gi|291404973|ref|XP_002718831.1| PREDICTED: ubiquitin B-like [Oryctolagus cuniculus]
 gi|344297907|ref|XP_003420637.1| PREDICTED: polyubiquitin-B-like [Loxodonta africana]
 gi|410979979|ref|XP_003996358.1| PREDICTED: polyubiquitin-B isoform 1 [Felis catus]
 gi|410979981|ref|XP_003996359.1| PREDICTED: polyubiquitin-B isoform 2 [Felis catus]
 gi|302595871|sp|P0CG53.1|UBB_BOVIN RecName: Full=Polyubiquitin-B; Contains: RecName: Full=Ubiquitin;
           Flags: Precursor
 gi|89994036|gb|AAI14002.1| Polyubiquitin [Bos taurus]
 gi|197129050|gb|ACH45548.1| putative ubiquitin C variant 1 [Taeniopygia guttata]
 gi|197129061|gb|ACH45559.1| putative ubiquitin C variant 5 [Taeniopygia guttata]
 gi|197129064|gb|ACH45562.1| putative ubiquitin C variant 9 [Taeniopygia guttata]
 gi|197129068|gb|ACH45566.1| putative ubiquitin C variant 14 [Taeniopygia guttata]
 gi|296476687|tpg|DAA18802.1| TPA: polyubiquitin [Bos taurus]
          Length = 305

 Score =  160 bits (406), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  107 bits (267), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 74/216 (34%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 302


>gi|290543384|ref|NP_001166536.1| polyubiquitin-B [Cavia porcellus]
 gi|302595872|sp|P0CG54.1|UBB_CAVPO RecName: Full=Polyubiquitin-B; Contains: RecName: Full=Ubiquitin;
           Flags: Precursor
 gi|1197093|dbj|BAA11842.1| ubiquitin [Cavia porcellus]
          Length = 311

 Score =  160 bits (406), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  109 bits (273), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 74/221 (33%), Positives = 125/221 (56%), Gaps = 8/221 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSIFV 217
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  ++ 
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGVYA 307


>gi|195491528|ref|XP_002093599.1| GE18016 [Drosophila yakuba]
 gi|194179700|gb|EDW93311.1| GE18016 [Drosophila yakuba]
          Length = 317

 Score =  160 bits (406), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  131 bits (330), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  107 bits (267), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 74/212 (34%), Positives = 121/212 (57%), Gaps = 8/212 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQII 208
           +   L   G+QL++ +TL+ Y+I++   L ++
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298


>gi|21428336|gb|AAM49828.1| GH17513p [Drosophila melanogaster]
          Length = 306

 Score =  160 bits (406), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  107 bits (267), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 74/216 (34%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 302


>gi|197129067|gb|ACH45565.1| putative ubiquitin C variant 12 [Taeniopygia guttata]
          Length = 381

 Score =  160 bits (406), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEPSDTIENVKAKIQDK--EGIPPDKQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  160 bits (405), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDKQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  131 bits (330), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDKQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  107 bits (267), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 74/218 (33%), Positives = 123/218 (56%), Gaps = 8/218 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 380


>gi|297847850|ref|XP_002891806.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297337648|gb|EFH68065.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 384

 Score =  160 bits (406), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 93  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 150

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 151 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 209

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ ++K  ++  +  IP 
Sbjct: 210 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNLKTKIQD-KEGIPP 268

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 269 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 328

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 329 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 375



 Score =  152 bits (383), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 100/274 (36%), Positives = 158/274 (57%), Gaps = 10/274 (3%)

Query: 16  IHAKVE--EEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---NDSGVMKLYFKTPS 70
           + AK++  E I  D   L ++G+ L++G T+ DY I   S++H      G M+++ KT +
Sbjct: 28  VKAKIQDIEGIPLDQQRLIFSGKLLDDGRTLADYSIQKESILHLALRLRGGMQIFIKTLT 87

Query: 71  NEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQ 130
             KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   NI  E TL 
Sbjct: 88  G-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 146

Query: 131 MISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQ 189
           ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL+
Sbjct: 147 LVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQRLIFAGKQLE 205

Query: 190 NLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIG 247
           + +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ ++K K+  + G
Sbjct: 206 DGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNLKTKIQDKEG 265

Query: 248 QAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
             PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 266 IPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 299



 Score =  129 bits (323), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 84/224 (37%), Positives = 130/224 (58%), Gaps = 5/224 (2%)

Query: 61  VMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDV 120
           +M++Y KT + EKT  L    SDTI N+K  I+  EGIP+ +  + + GKL++   TL  
Sbjct: 2   LMQIYAKTLT-EKTITLDVESSDTINNVKAKIQDIEGIPLDQQRLIFSGKLLDDGRTLAD 60

Query: 121 LNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDC 179
            +I  E  L +    +   +IF++T T  T+ LEV  + T+ +VK  ++  +  IP +  
Sbjct: 61  YSIQKESILHLALRLRGGMQIFIKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQ 119

Query: 180 ELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRD 237
            L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +
Sbjct: 120 RLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDN 179

Query: 238 VKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 180 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 223



 Score =  109 bits (272), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 74/220 (33%), Positives = 124/220 (56%), Gaps = 8/220 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 169 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 226

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 227 LRGGMQIFVKTLTG-KTITLEVESSDTIDNLKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 285

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 286 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 344

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSIF 216
           +   L   G+QL++ +TLA Y+I++   L ++  ++   F
Sbjct: 345 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGSF 384


>gi|33323472|gb|AAQ07453.1| ubiquitin [Musa acuminata AAA Group]
          Length = 381

 Score =  160 bits (406), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I L+V   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLKVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 251 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 297



 Score =  160 bits (406), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP 
Sbjct: 208 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLKVESSDTIDNVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 327 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 373



 Score =  133 bits (335), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  109 bits (273), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 74/212 (34%), Positives = 121/212 (57%), Gaps = 8/212 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  LK   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLKVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQII 208
           +   L   G+QL++ +TLA Y+I++   L ++
Sbjct: 343 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 374


>gi|197129055|gb|ACH45553.1| putative ubiquitin C variant 2 [Taeniopygia guttata]
 gi|197129057|gb|ACH45555.1| putative ubiquitin C variant 2 [Taeniopygia guttata]
          Length = 412

 Score =  160 bits (405), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  142 bits (358), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 97/263 (36%), Positives = 151/263 (57%), Gaps = 10/263 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L GR I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGRTITLEVEPSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVF 257
           + +VK K+  + G  PD QRL+F
Sbjct: 327 IENVKAKIQDKEGIPPDQQRLIF 349



 Score =  131 bits (329), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 66/192 (34%), Positives = 105/192 (54%), Gaps = 7/192 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++      P 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGRTITLEVEPSDTIENVKAKIQDKEGIPPD 343

Query: 177 EDCELFRGGEQL 188
           +   +F G  ++
Sbjct: 344 QQRLIFAGSWRM 355


>gi|226484007|emb|CAX79672.1| ubiquitin C [Schistosoma japonicum]
          Length = 381

 Score =  160 bits (405), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYHIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  159 bits (401), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   +I  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYHIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  131 bits (329), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 130/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYHIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  108 bits (269), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 74/219 (33%), Positives = 124/219 (56%), Gaps = 8/219 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSI 215
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  +
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGL 381


>gi|226469788|emb|CAX76724.1| polyubiquitin [Schistosoma japonicum]
          Length = 304

 Score =  160 bits (405), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 165/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK   +  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKTQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 130/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K   + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKTQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  105 bits (263), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 73/216 (33%), Positives = 122/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K   + +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKTQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 302


>gi|256079430|ref|XP_002575990.1| ubiquitin (ribosomal protein L40) [Schistosoma mansoni]
          Length = 349

 Score =  160 bits (405), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 59  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 116

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 117 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 175

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 176 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 234

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 235 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 294

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 295 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 341



 Score =  136 bits (342), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 86/231 (37%), Positives = 136/231 (58%), Gaps = 5/231 (2%)

Query: 54  VIHNDSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIE 113
           V+H ++  M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E
Sbjct: 37  VVHENTRRMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE 95

Query: 114 SYITLDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRI 172
              TL   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  + 
Sbjct: 96  DGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KE 154

Query: 173 CIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVA 230
            IP +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV 
Sbjct: 155 GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 214

Query: 231 KFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
             DT+ +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 215 PSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 265



 Score =  108 bits (270), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 75/219 (34%), Positives = 124/219 (56%), Gaps = 8/219 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 135 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 192

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 193 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 251

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 252 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 310

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSI 215
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  I
Sbjct: 311 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGI 349


>gi|347968153|ref|XP_312337.4| AGAP002599-PA [Anopheles gambiae str. PEST]
 gi|333468138|gb|EAA08053.5| AGAP002599-PA [Anopheles gambiae str. PEST]
          Length = 305

 Score =  160 bits (405), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESPLHL 297



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  106 bits (265), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 74/212 (34%), Positives = 121/212 (57%), Gaps = 8/212 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQII 208
           +   L   G+QL++ +TL+ Y+I++   L ++
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESPLHLV 298



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 51/139 (36%), Positives = 78/139 (56%), Gaps = 6/139 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPK 136
           L   NI  E  L ++  P+
Sbjct: 284 LSDYNIQKESPLHLVLRPR 302


>gi|281205784|gb|EFA79973.1| ubiquitin [Polysphondylium pallidum PN500]
          Length = 306

 Score =  160 bits (405), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEGSDTIENVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQVFVKTLTG-KTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   ++FV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQVFVKTLTGKTITLEVEGSDTIENVKTKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    +FVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQVFVKTLTGKTITLEVEGSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  131 bits (330), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 82/223 (36%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   ++FV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQVFVKTLTGKTITLEVEGSDTIENVKTKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    +FVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQVFVKTLTGKTITLEVEGSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  107 bits (266), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 73/218 (33%), Positives = 123/218 (56%), Gaps = 8/218 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEGSDTIENVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQVFVKTLTG-KTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   ++FV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQVFVKTLTGKTITLEVEGSDTIENVKTKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 304


>gi|15284034|dbj|BAB63445.1| ubiquitin 4 [Physarum polycephalum]
 gi|19909906|dbj|BAB87826.1| polyubiquitin [Physarum polycephalum]
          Length = 305

 Score =  160 bits (405), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIESVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIE++K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIESVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+  VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIESVKTKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           +  VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IESVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  130 bits (328), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 129/223 (57%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIE++K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIESVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+  VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIESVKTKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+  V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIESV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  106 bits (265), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 73/216 (33%), Positives = 122/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIESVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIE++K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIESVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+  VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIESVKTKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 302


>gi|395517134|ref|XP_003762737.1| PREDICTED: polyubiquitin-B-like [Sarcophilus harrisii]
          Length = 305

 Score =  160 bits (405), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 165/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++      P 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPD 191

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   +F  G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 192 QXXXIF-AGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  125 bits (313), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 81/223 (36%), Positives = 128/223 (57%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD    +F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQXXXIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  107 bits (267), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 74/219 (33%), Positives = 123/219 (56%), Gaps = 8/219 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +    + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQXXXIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSI 215
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  +
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGV 305


>gi|358370809|dbj|GAA87419.1| polyubiquitin [Aspergillus kawachii IFO 4308]
          Length = 305

 Score =  160 bits (404), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 167/287 (58%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK+K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IDNVKNKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  131 bits (329), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 72/216 (33%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKNKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 302


>gi|328867151|gb|EGG15534.1| ubiquitin [Dictyostelium fasciculatum]
          Length = 380

 Score =  160 bits (404), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEGSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEGSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  131 bits (329), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEGSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  108 bits (269), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 76/224 (33%), Positives = 125/224 (55%), Gaps = 8/224 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEGSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEGSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSIFVKLL 220
           +   L   G+QL++ +TL+ Y+I++   L ++  ++      LL
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGENLAPLL 310


>gi|226484872|emb|CAX79713.1| ubiquitin C [Schistosoma japonicum]
          Length = 305

 Score =  160 bits (404), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QR++F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRMIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  107 bits (266), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 73/219 (33%), Positives = 124/219 (56%), Gaps = 8/219 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSI 215
           +   +   G+QL++ +TL+ Y+I++   L ++  ++  +
Sbjct: 267 DQQRMIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGL 305


>gi|195340400|ref|XP_002036801.1| GM12582 [Drosophila sechellia]
 gi|194130917|gb|EDW52960.1| GM12582 [Drosophila sechellia]
          Length = 321

 Score =  160 bits (404), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LLGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  130 bits (326), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 130/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++       +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLLGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  115 bits (289), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 81/231 (35%), Positives = 131/231 (56%), Gaps = 10/231 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYI 225
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTI 317


>gi|353231251|emb|CCD77669.1| putative ubiquitin (ribosomal protein L40) [Schistosoma mansoni]
          Length = 379

 Score =  160 bits (404), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 106/285 (37%), Positives = 167/285 (58%), Gaps = 8/285 (2%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNS-VIHNDS 59
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I     V+H ++
Sbjct: 91  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQTELIVVHENT 148

Query: 60  GVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLD 119
             M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL 
Sbjct: 149 RRMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLS 207

Query: 120 VLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSED 178
             NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP + 
Sbjct: 208 DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQ 266

Query: 179 CELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVR 236
             L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ 
Sbjct: 267 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 326

Query: 237 DVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 371



 Score =  153 bits (386), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 164/287 (57%), Gaps = 12/287 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E  L ++       +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQTE--LIVVHENTRRMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 188

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 189 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 248

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 249 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 295



 Score =  127 bits (319), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 83/221 (37%), Positives = 128/221 (57%), Gaps = 3/221 (1%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSIFVKLLNGRYIILEVAKFDTVRDVKD 240
           L   G+QL++ +TL+ Y+I+   ++      +  IFVK L G+ I LEV   DT+ +VK 
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQTELIVVHENTRRMQIFVKTLTGKTITLEVEPSDTIENVKA 178

Query: 241 KLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 219



 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 75/219 (34%), Positives = 124/219 (56%), Gaps = 8/219 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 165 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 222

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 223 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 281

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 282 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 340

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSI 215
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  I
Sbjct: 341 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGI 379


>gi|392569337|gb|EIW62510.1| ubiquitin 10.1 [Trametes versicolor FP-101664 SS1]
          Length = 463

 Score =  160 bits (404), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 106/293 (36%), Positives = 168/293 (57%), Gaps = 16/293 (5%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--------IFVKLLNGRYIILE 228
           +   L   G+QL++ +TL+ Y+I++   L ++  ++ +        IFVK L+GR I LE
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGAFRVLDSMQIFVKWLHGRTITLE 326

Query: 229 VAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           V   DT+ DVK K+    G +PD QRL+F  +QL+D R L+ Y I  ES ++L
Sbjct: 327 VRSSDTIDDVKAKIQEIEGISPDRQRLIFASKQLDDGRTLSDYNIQKESTLHL 379



 Score =  159 bits (402), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  149 bits (375), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 105/294 (35%), Positives = 163/294 (55%), Gaps = 18/294 (6%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMI-------SVPKELQEIFVQT-PTSTVKLEVRRAHTVLDVKKMVES 169
           L   NI  E TL ++        V   +Q IFV+     T+ LEVR + T+ DVK  ++ 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGAFRVLDSMQ-IFVKWLHGRTITLEVRSSDTIDDVKAKIQE 342

Query: 170 MRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIIL 227
           +    P     +F   +QL + +TL+ Y+I++   L ++  ++    IFVK L G+ I L
Sbjct: 343 IEGISPDRQRLIF-ASKQLDDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL 401

Query: 228 EVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           EV   DT+ +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 402 EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 455



 Score =  131 bits (329), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score = 85.9 bits (211), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 119/227 (52%), Gaps = 18/227 (7%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIHN--- 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300

Query: 58  --------DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGG 109
                   DS  M+++ K     +T  L+   SDTI+++K  I+  EGI      + +  
Sbjct: 301 LRGAFRVLDS--MQIFVKWLHG-RTITLEVRSSDTIDDVKAKIQEIEGISPDRQRLIFAS 357

Query: 110 KLIESYITLDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVE 168
           K ++   TL   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++
Sbjct: 358 KQLDDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 417

Query: 169 SMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSI 215
             +  IP +   L   G+QL++ +TL+ Y+I++   L ++  ++  +
Sbjct: 418 D-KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGL 463


>gi|296478548|tpg|DAA20663.1| TPA: ubiquitin C [Bos taurus]
          Length = 314

 Score =  160 bits (404), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKGKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKGKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  110 bits (275), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 76/220 (34%), Positives = 124/220 (56%), Gaps = 8/220 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSIF 216
           +   L   G+QL++ +TL+ Y+I++   L ++  +K   F
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLKGRCF 306


>gi|15284032|dbj|BAB63444.1| ubiquitin 3 [Physarum polycephalum]
 gi|19909904|dbj|BAB87825.1| polyubiquitin [Physarum polycephalum]
          Length = 305

 Score =  160 bits (404), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIESVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIHKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIE++K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIESVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+  VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIESVKTKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           +  VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IESVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  130 bits (328), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 130/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIE++K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIESVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI+ E TL ++   +   +IFV+T T  T+ LEV  + T+  VK  ++  +  IP +   
Sbjct: 60  NIHKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIESVKTKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+  V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIESV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  106 bits (265), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 73/212 (34%), Positives = 120/212 (56%), Gaps = 8/212 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIESVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIE++K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIESVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+  VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIESVKTKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQII 208
           +   L   G+QL++ +TL+ Y+I++   L ++
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298


>gi|187729698|gb|ACD31680.1| ubiquitin [Gossypium hirsutum]
          Length = 305

 Score =  160 bits (404), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 165/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L  Y I  ES ++L
Sbjct: 251 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLPDYNIQKESTLHL 297



 Score =  133 bits (334), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  105 bits (263), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 72/216 (33%), Positives = 122/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL  Y+I++   L ++  ++
Sbjct: 267 DQQRLIFAGKQLEDGRTLPDYNIQKESTLHLVLRLR 302


>gi|328353975|emb|CCA40372.1| Ubiquitin cross-reactive protein [Komagataella pastoris CBS 7435]
          Length = 386

 Score =  160 bits (404), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  160 bits (404), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 72/216 (33%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 378


>gi|406606462|emb|CCH42236.1| ubiquitin C [Wickerhamomyces ciferrii]
          Length = 383

 Score =  160 bits (404), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  160 bits (404), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 72/216 (33%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 378


>gi|403413175|emb|CCL99875.1| predicted protein [Fibroporia radiculosa]
          Length = 312

 Score =  160 bits (404), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 22  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 79

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 80  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 138

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 139 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 197

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 198 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 257

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 258 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 304



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/226 (37%), Positives = 132/226 (58%), Gaps = 5/226 (2%)

Query: 59  SGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITL 118
           S  M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL
Sbjct: 5   SSNMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 63

Query: 119 DVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSE 177
              NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +
Sbjct: 64  SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPD 122

Query: 178 DCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTV 235
              L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+
Sbjct: 123 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI 182

Query: 236 RDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
            +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 183 DNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 228



 Score =  107 bits (267), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 72/219 (32%), Positives = 124/219 (56%), Gaps = 8/219 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 98  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 155

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 156 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 214

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 215 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 273

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSI 215
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  +
Sbjct: 274 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGL 312


>gi|6322989|ref|NP_013061.1| ubiquitin [Saccharomyces cerevisiae S288c]
 gi|260940391|ref|XP_002614495.1| ubiquitin [Clavispora lusitaniae ATCC 42720]
 gi|302595956|sp|P0CG63.1|UBI4P_YEAST RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
           Flags: Precursor
 gi|4734|emb|CAA29198.1| unnamed protein product [Saccharomyces cerevisiae]
 gi|1360231|emb|CAA97489.1| UBI4 [Saccharomyces cerevisiae]
 gi|151941132|gb|EDN59510.1| poly-ubiquitin [Saccharomyces cerevisiae YJM789]
 gi|190406010|gb|EDV09277.1| hypothetical protein SCRG_04952 [Saccharomyces cerevisiae RM11-1a]
 gi|238851681|gb|EEQ41145.1| ubiquitin [Clavispora lusitaniae ATCC 42720]
 gi|259147952|emb|CAY81201.1| Ubi4p [Saccharomyces cerevisiae EC1118]
 gi|285813387|tpg|DAA09283.1| TPA: ubiquitin [Saccharomyces cerevisiae S288c]
 gi|323336529|gb|EGA77795.1| Ubi4p [Saccharomyces cerevisiae Vin13]
 gi|349579690|dbj|GAA24851.1| K7_Ubi4p [Saccharomyces cerevisiae Kyokai no. 7]
          Length = 381

 Score =  159 bits (403), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  159 bits (403), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 72/216 (33%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 378


>gi|254585537|ref|XP_002498336.1| ZYRO0G07854p [Zygosaccharomyces rouxii]
 gi|238941230|emb|CAR29403.1| ZYRO0G07854p [Zygosaccharomyces rouxii]
          Length = 460

 Score =  159 bits (403), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  159 bits (403), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  159 bits (403), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 403 IDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 72/221 (32%), Positives = 124/221 (56%), Gaps = 8/221 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSIFV 217
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    +
Sbjct: 419 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGAML 459


>gi|440638790|gb|ELR08709.1| polyubiquitin [Geomyces destructans 20631-21]
          Length = 381

 Score =  159 bits (403), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  159 bits (403), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 72/216 (33%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 378


>gi|261205776|ref|XP_002627625.1| ubiquitin [Ajellomyces dermatitidis SLH14081]
 gi|239592684|gb|EEQ75265.1| ubiquitin [Ajellomyces dermatitidis SLH14081]
          Length = 381

 Score =  159 bits (403), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  158 bits (400), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+  + I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LDVESGDTIDAVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  127 bits (319), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 81/223 (36%), Positives = 128/223 (57%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L     DTI+ +K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLDVESGDTIDAVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 72/216 (33%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 378


>gi|124377852|tpd|FAA00316.1| TPA: polyubiquitin [Eremothecium gossypii]
 gi|124377856|tpd|FAA00318.1| TPA: polyubiquitin [Saccharomyces paradoxus NRRL Y-17217]
          Length = 380

 Score =  159 bits (403), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  159 bits (403), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 72/216 (33%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 378


>gi|405123351|gb|AFR98116.1| polyubiquitin [Cryptococcus neoformans var. grubii H99]
          Length = 381

 Score =  159 bits (403), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  159 bits (403), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  131 bits (330), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  107 bits (266), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 72/219 (32%), Positives = 124/219 (56%), Gaps = 8/219 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSI 215
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  +
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 381


>gi|114159828|gb|ABI53721.1| polyubiquitin [Pyropia yezoensis]
          Length = 457

 Score =  159 bits (403), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  159 bits (403), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  159 bits (403), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 403 IDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  106 bits (265), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 72/219 (32%), Positives = 124/219 (56%), Gaps = 8/219 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSI 215
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  +
Sbjct: 419 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 457


>gi|115492305|ref|XP_001210780.1| ubiquitin [Aspergillus terreus NIH2624]
 gi|149242950|ref|XP_001526489.1| hypothetical protein LELG_03047 [Lodderomyces elongisporus NRRL
           YB-4239]
 gi|169771599|ref|XP_001820269.1| ubiquitin [Aspergillus oryzae RIB40]
 gi|212542037|ref|XP_002151173.1| polyubiquitin UbiD/Ubi4, putative [Talaromyces marneffei ATCC
           18224]
 gi|238485820|ref|XP_002374148.1| polyubiquitin UbiD/Ubi4, putative [Aspergillus flavus NRRL3357]
 gi|242769894|ref|XP_002341866.1| polyubiquitin UbiD/Ubi4, putative [Talaromyces stipitatus ATCC
           10500]
 gi|448097159|ref|XP_004198602.1| Piso0_001982 [Millerozyma farinosa CBS 7064]
 gi|448111178|ref|XP_004201781.1| Piso0_001982 [Millerozyma farinosa CBS 7064]
 gi|83768128|dbj|BAE58267.1| unnamed protein product [Aspergillus oryzae RIB40]
 gi|114197640|gb|EAU39340.1| ubiquitin [Aspergillus terreus NIH2624]
 gi|146450612|gb|EDK44868.1| hypothetical protein LELG_03047 [Lodderomyces elongisporus NRRL
           YB-4239]
 gi|210066080|gb|EEA20173.1| polyubiquitin UbiD/Ubi4, putative [Talaromyces marneffei ATCC
           18224]
 gi|218725062|gb|EED24479.1| polyubiquitin UbiD/Ubi4, putative [Talaromyces stipitatus ATCC
           10500]
 gi|220699027|gb|EED55366.1| polyubiquitin UbiD/Ubi4, putative [Aspergillus flavus NRRL3357]
 gi|359380024|emb|CCE82265.1| Piso0_001982 [Millerozyma farinosa CBS 7064]
 gi|359464770|emb|CCE88475.1| Piso0_001982 [Millerozyma farinosa CBS 7064]
 gi|391871753|gb|EIT80910.1| ubiquitin and ubiquitin-like protein [Aspergillus oryzae 3.042]
          Length = 305

 Score =  159 bits (403), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 72/216 (33%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 302


>gi|124377858|tpd|FAA00319.1| TPA: polyubiquitin [Cryptococcus neoformans var. neoformans
           B-3501A]
          Length = 456

 Score =  159 bits (403), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  159 bits (403), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  159 bits (403), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 403 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449



 Score =  131 bits (330), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  106 bits (265), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 72/216 (33%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 419 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 454


>gi|116202449|ref|XP_001227036.1| polyubiquitin [Chaetomium globosum CBS 148.51]
 gi|126139705|ref|XP_001386375.1| hypothetical protein PICST_73878 [Scheffersomyces stipitis CBS
           6054]
 gi|255948832|ref|XP_002565183.1| Pc22g12390 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|367040177|ref|XP_003650469.1| hypothetical protein THITE_2072392 [Thielavia terrestris NRRL 8126]
 gi|389633097|ref|XP_003714201.1| polyubiquitin [Magnaporthe oryzae 70-15]
 gi|2894304|emb|CAA11267.1| polyubiquitin [Nicotiana tabacum]
 gi|3334645|emb|CAA07773.1| polyubiquitin [Gibberella pulicaris]
 gi|88177627|gb|EAQ85095.1| polyubiquitin [Chaetomium globosum CBS 148.51]
 gi|88766393|gb|ABD49716.1| polyubiquitin [Metarhizium anisopliae]
 gi|126093657|gb|ABN68346.1| predicted protein [Scheffersomyces stipitis CBS 6054]
 gi|211592200|emb|CAP98527.1| Pc22g12390 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|310800960|gb|EFQ35853.1| ubiquitin family protein [Glomerella graminicola M1.001]
 gi|322711004|gb|EFZ02578.1| ubiquitin [Metarhizium anisopliae ARSEF 23]
 gi|340516961|gb|EGR47207.1| polyubiquitin [Trichoderma reesei QM6a]
 gi|346997730|gb|AEO64133.1| hypothetical protein THITE_2072392 [Thielavia terrestris NRRL 8126]
 gi|351646534|gb|EHA54394.1| polyubiquitin [Magnaporthe oryzae 70-15]
 gi|358386330|gb|EHK23926.1| hypothetical protein TRIVIDRAFT_215920 [Trichoderma virens Gv29-8]
 gi|361129858|gb|EHL01740.1| putative Polyubiquitin [Glarea lozoyensis 74030]
 gi|378733143|gb|EHY59602.1| polyubiquitin [Exophiala dermatitidis NIH/UT8656]
 gi|402085157|gb|EJT80055.1| polyubiquitin [Gaeumannomyces graminis var. tritici R3-111a-1]
 gi|406701275|gb|EKD04425.1| hypothetical protein A1Q2_01309 [Trichosporon asahii var. asahii
           CBS 8904]
 gi|406867327|gb|EKD20365.1| ubiquitin [Marssonina brunnea f. sp. 'multigermtubi' MB_m1]
 gi|407920052|gb|EKG13270.1| Ubiquitin [Macrophomina phaseolina MS6]
 gi|453085016|gb|EMF13059.1| ubiquitin [Mycosphaerella populorum SO2202]
          Length = 305

 Score =  159 bits (403), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 72/216 (33%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 302


>gi|297805150|ref|XP_002870459.1| polyubiquitin [Arabidopsis lyrata subsp. lyrata]
 gi|297316295|gb|EFH46718.1| polyubiquitin [Arabidopsis lyrata subsp. lyrata]
          Length = 537

 Score =  159 bits (403), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 170 LEVESSDTIDNVKAKIEDK--EGIPTDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 227

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 228 LRGGMQIFVKTLTG-KTITLEVESSDTIDNLKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 286

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP+
Sbjct: 287 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGRTITLEVESSDTIDNVKAKIQD-KEEIPA 345

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHV--KHSIFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  +     IFVK L G+ I LEV   DT
Sbjct: 346 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLCGGMQIFVKTLTGKTITLEVESSDT 405

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 406 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 452



 Score =  158 bits (399), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ LK +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 246 LEVESSDTIDNLKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 303

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  +T  L+   SDTI+N+K  I+ +E IP  +  + + GK +E   T
Sbjct: 304 LRGGMQIFVKTLTG-RTITLEVESSDTIDNVKAKIQDKEEIPADQQRLIFAGKQLEDGRT 362

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++       +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 363 LADYNIQKESTLHLVLRLCGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 421

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 422 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 481

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 482 IDNVKAKIQDKEGIVPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 528



 Score =  154 bits (390), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 105/279 (37%), Positives = 160/279 (57%), Gaps = 10/279 (3%)

Query: 9   IEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---NDSGVMKLY 65
           I  +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S++H      G M+++
Sbjct: 26  INNVKAQIQDK--EGIPLDQQRLIFAGKQLEDGRTLADYNIQKESILHLALRLRGGMQIF 83

Query: 66  FKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINN 125
            KT +  KT  L+   SDTI+N+K  I+ +EGI   +  + + GK +E   TL   NI  
Sbjct: 84  VKTLTG-KTITLEVESSDTIDNVKAKIQDKEGILPDQQRLIFAGKQLEDGRTLADYNIQK 142

Query: 126 EDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRG 184
           E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  +E  +  IP++   L   
Sbjct: 143 ESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIED-KEGIPTDQQRLIFA 201

Query: 185 GEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKL 242
           G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ ++K K+
Sbjct: 202 GKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNLKAKI 261

Query: 243 FREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
             + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 262 QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 300



 Score =  124 bits (311), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 82/224 (36%), Positives = 129/224 (57%), Gaps = 5/224 (2%)

Query: 61  VMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDV 120
           +M+++ +T + EKT  L A  S TI N+K  I+ +EGIP+ +  + + GK +E   TL  
Sbjct: 3   LMQIFARTLT-EKTITLDAESSYTINNVKAQIQDKEGIPLDQQRLIFAGKQLEDGRTLAD 61

Query: 121 LNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDC 179
            NI  E  L +    +   +IFV+T T  T+ LEV  + T+ +VK  ++     +P +  
Sbjct: 62  YNIQKESILHLALRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGILPDQQR 121

Query: 180 ELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRD 237
            +F  G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +
Sbjct: 122 LIF-AGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDN 180

Query: 238 VKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           VK K+  + G   D QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 181 VKAKIEDKEGIPTDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 224



 Score =  113 bits (282), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 74/220 (33%), Positives = 125/220 (56%), Gaps = 8/220 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  EEI  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 322 LEVESSDTIDNVKAKIQDK--EEIPADQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 379

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 380 LCGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 438

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++     +P 
Sbjct: 439 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIVPD 498

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSIF 216
           +   +F  G+QL++ +TLA Y+I++   L ++  ++   F
Sbjct: 499 QQRLIF-AGKQLEDGRTLADYNIQKESTLHLVLRLRGGSF 537


>gi|50423807|ref|XP_460488.1| DEHA2F02816p [Debaryomyces hansenii CBS767]
 gi|210076178|ref|XP_504128.2| YALI0E18986p [Yarrowia lipolytica]
 gi|49656157|emb|CAG88798.1| DEHA2F02816p [Debaryomyces hansenii CBS767]
 gi|199426939|emb|CAG79723.2| YALI0E18986p [Yarrowia lipolytica CLIB122]
 gi|392574761|gb|EIW67896.1| hypothetical protein TREMEDRAFT_44902 [Tremella mesenterica DSM
           1558]
          Length = 457

 Score =  159 bits (403), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  159 bits (403), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  159 bits (403), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 403 IDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 72/216 (33%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 419 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 454


>gi|45185626|ref|NP_983342.1| ACL062Cp [Ashbya gossypii ATCC 10895]
 gi|44981344|gb|AAS51166.1| ACL062Cp [Ashbya gossypii ATCC 10895]
 gi|374106548|gb|AEY95457.1| FACL062Cp [Ashbya gossypii FDAG1]
          Length = 382

 Score =  159 bits (403), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  159 bits (403), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 72/216 (33%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 378


>gi|58260904|ref|XP_567862.1| ATP-dependent protein binding protein [Cryptococcus neoformans var.
           neoformans JEC21]
 gi|134116983|ref|XP_772718.1| hypothetical protein CNBK0920 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50255336|gb|EAL18071.1| hypothetical protein CNBK0920 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57229943|gb|AAW46345.1| ATP-dependent protein binding protein, putative [Cryptococcus
           neoformans var. neoformans JEC21]
          Length = 457

 Score =  159 bits (403), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  159 bits (403), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  159 bits (403), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 403 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449



 Score =  131 bits (330), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  106 bits (265), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 72/216 (33%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 419 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 454


>gi|296420280|ref|XP_002839703.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|13345367|gb|AAK19308.1| polyubiquitin [Tuber borchii]
 gi|295635897|emb|CAZ83894.1| unnamed protein product [Tuber melanosporum]
          Length = 306

 Score =  159 bits (403), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 72/216 (33%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 302


>gi|402220063|gb|EJU00136.1| ubiquitin [Dacryopinax sp. DJM-731 SS1]
          Length = 381

 Score =  159 bits (403), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  159 bits (403), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  131 bits (330), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  106 bits (265), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 72/216 (33%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 378


>gi|193627304|ref|XP_001947010.1| PREDICTED: polyubiquitin-G-like [Acyrthosiphon pisum]
          Length = 381

 Score =  159 bits (403), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 104/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDSIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SD+IEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + ++ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDSIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   D+
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDS 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  159 bits (403), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 104/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDSIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SD+IEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + ++ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDSIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   D+
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDS 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  130 bits (326), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 81/223 (36%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SD+IEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + ++ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDSIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   D++ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDSIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  107 bits (268), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 72/219 (32%), Positives = 124/219 (56%), Gaps = 8/219 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVESSDSIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SD+IEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + ++ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDSIENVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSI 215
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  +
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 381


>gi|50307963|ref|XP_453980.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|302595952|sp|P0CG75.1|UBI4P_KLULA RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
           Flags: Precursor
 gi|5531273|emb|CAB50898.1| polyubiquitin [Kluyveromyces lactis]
 gi|49643115|emb|CAG99067.1| KLLA0E00749p [Kluyveromyces lactis]
          Length = 381

 Score =  159 bits (403), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  159 bits (403), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  107 bits (267), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 73/219 (33%), Positives = 124/219 (56%), Gaps = 8/219 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSI 215
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  I
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGI 381


>gi|425774856|gb|EKV13151.1| hypothetical protein PDIG_39650 [Penicillium digitatum PHI26]
          Length = 309

 Score =  159 bits (403), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 19  LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 76

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 77  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 135

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 136 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 194

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 195 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 254

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 255 IDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 301



 Score =  129 bits (323), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 80/212 (37%), Positives = 124/212 (58%), Gaps = 4/212 (1%)

Query: 73  KTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMI 132
           KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   NI  E TL ++
Sbjct: 15  KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 74

Query: 133 SVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNL 191
              +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ 
Sbjct: 75  LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPPDQQRLIFAGKQLEDG 133

Query: 192 KTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQA 249
           +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  
Sbjct: 134 RTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIP 193

Query: 250 PDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 194 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 225



 Score =  105 bits (263), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 72/216 (33%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 95  LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 152

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 153 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 211

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 212 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 270

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 271 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 306



 Score = 57.4 bits (137), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 43/68 (63%)

Query: 214 SIFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKI 273
           +I + L+ G+ I LEV   DT+ +VK K+  + G  PD QRL+F  +QLED R L+ Y I
Sbjct: 6   NIPLSLVTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 65

Query: 274 VNESIVNL 281
             ES ++L
Sbjct: 66  QKESTLHL 73


>gi|3776536|gb|AAC64787.1| polyubiquitin [Schizosaccharomyces pombe]
          Length = 610

 Score =  159 bits (403), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  159 bits (403), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  159 bits (403), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 403 IDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449



 Score =  159 bits (403), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 419 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 478

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 479 IDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 525



 Score =  159 bits (403), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 319 LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 377 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 435

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 436 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 494

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 495 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 554

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 555 IDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 601



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  109 bits (272), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 73/220 (33%), Positives = 125/220 (56%), Gaps = 8/220 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 395 LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 452

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 453 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 511

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 512 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 570

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSIF 216
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  +F
Sbjct: 571 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGLF 610


>gi|124377854|tpd|FAA00317.1| TPA: polyubiquitin [Aspergillus nidulans FGSC A4]
          Length = 304

 Score =  159 bits (403), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  131 bits (330), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  105 bits (263), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 72/216 (33%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 302


>gi|259487366|tpe|CBF85986.1| TPA: Polyubiquitin Fragment [Source:UniProtKB/TrEMBL;Acc:A2RVC1]
           [Aspergillus nidulans FGSC A4]
          Length = 305

 Score =  159 bits (403), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  131 bits (330), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  105 bits (263), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 72/216 (33%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 302


>gi|85091236|ref|XP_958803.1| polyubiquitin [Neurospora crassa OR74A]
 gi|302595953|sp|P0CG70.1|UBI4P_NEUCR RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
           Flags: Precursor
 gi|295930|emb|CAA31530.1| ubiquitin [Neurospora crassa]
 gi|28920189|gb|EAA29567.1| polyubiquitin [Neurospora crassa OR74A]
 gi|336466506|gb|EGO54671.1| polyubiquitin [Neurospora tetrasperma FGSC 2508]
 gi|350286609|gb|EGZ67856.1| polyubiquitin [Neurospora tetrasperma FGSC 2509]
          Length = 305

 Score =  159 bits (403), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 167/287 (58%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKQKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK+ ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKQKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 132/223 (59%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK+ ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKQKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 72/212 (33%), Positives = 122/212 (57%), Gaps = 8/212 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKQKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK+ ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKQKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQII 208
           +   L   G+QL++ +TL+ Y+I++   L ++
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298


>gi|389742108|gb|EIM83295.1| polyubiquitin [Stereum hirsutum FP-91666 SS1]
 gi|449546777|gb|EMD37746.1| polyubiquitin [Ceriporiopsis subvermispora B]
 gi|449550837|gb|EMD41801.1| polyubiquitin [Ceriporiopsis subvermispora B]
          Length = 457

 Score =  159 bits (403), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  159 bits (403), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  159 bits (403), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 403 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449



 Score =  131 bits (330), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  107 bits (266), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 72/219 (32%), Positives = 124/219 (56%), Gaps = 8/219 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSI 215
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  +
Sbjct: 419 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGL 457


>gi|336385317|gb|EGO26464.1| hypothetical protein SERLADRAFT_368035 [Serpula lacrymans var.
           lacrymans S7.9]
 gi|392571572|gb|EIW64744.1| ubiquitin [Trametes versicolor FP-101664 SS1]
 gi|395334250|gb|EJF66626.1| ubiquitin [Dichomitus squalens LYAD-421 SS1]
 gi|403414247|emb|CCM00947.1| predicted protein [Fibroporia radiculosa]
          Length = 381

 Score =  159 bits (403), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  159 bits (403), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  131 bits (330), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  106 bits (265), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 72/216 (33%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 378


>gi|55783587|gb|AAV65292.1| polyubiquitin [Aspergillus fumigatus]
          Length = 304

 Score =  159 bits (403), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  105 bits (263), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 72/216 (33%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 302


>gi|170097832|ref|XP_001880135.1| ubiquitin [Laccaria bicolor S238N-H82]
 gi|395056|emb|CAA80851.1| ubiquitin [Phanerochaete chrysosporium]
 gi|164644573|gb|EDR08822.1| ubiquitin [Laccaria bicolor S238N-H82]
 gi|389741436|gb|EIM82624.1| ubiquitin [Stereum hirsutum FP-91666 SS1]
          Length = 381

 Score =  159 bits (403), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  159 bits (403), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  131 bits (330), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  107 bits (266), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 72/219 (32%), Positives = 124/219 (56%), Gaps = 8/219 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSI 215
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  +
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGL 381


>gi|50286405|ref|XP_445631.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49524936|emb|CAG58542.1| unnamed protein product [Candida glabrata]
          Length = 533

 Score =  159 bits (403), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  159 bits (403), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  159 bits (403), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 403 IDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449



 Score =  159 bits (403), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 419 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 478

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 479 IDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 525



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  105 bits (263), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 72/216 (33%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 319 LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 377 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 435

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 436 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 494

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 495 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 530


>gi|156841217|ref|XP_001643983.1| hypothetical protein Kpol_1070p6 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156114615|gb|EDO16125.1| hypothetical protein Kpol_1070p6 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 533

 Score =  159 bits (403), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  159 bits (403), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  159 bits (403), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 403 IDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449



 Score =  159 bits (403), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 419 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 478

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 479 IDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 525



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  105 bits (263), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 72/216 (33%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 319 LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 377 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 435

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 436 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 494

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 495 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 530


>gi|154312178|ref|XP_001555417.1| polyubiquitin [Botryotinia fuckeliana B05.10]
 gi|171682222|ref|XP_001906054.1| hypothetical protein [Podospora anserina S mat+]
 gi|3091264|gb|AAC15225.1| polyubiquitin [Botryotinia fuckeliana]
 gi|170941070|emb|CAP66720.1| unnamed protein product [Podospora anserina S mat+]
 gi|345566606|gb|EGX49548.1| hypothetical protein AOL_s00078g37 [Arthrobotrys oligospora ATCC
           24927]
 gi|347836850|emb|CCD51422.1| similar to polyubiquitin protein [Botryotinia fuckeliana]
 gi|393248123|gb|EJD55630.1| ubiquitin [Auricularia delicata TFB-10046 SS5]
 gi|409051494|gb|EKM60970.1| hypothetical protein PHACADRAFT_247222 [Phanerochaete carnosa
           HHB-10118-sp]
          Length = 305

 Score =  159 bits (403), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  131 bits (330), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  106 bits (265), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 72/216 (33%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 302


>gi|226484061|emb|CAX79699.1| ubiquitin C [Schistosoma japonicum]
          Length = 305

 Score =  159 bits (403), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QR++F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRVIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  106 bits (265), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 73/219 (33%), Positives = 124/219 (56%), Gaps = 8/219 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSI 215
           +   +   G+QL++ +TL+ Y+I++   L ++  ++  +
Sbjct: 267 DQQRVIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGL 305


>gi|126352454|ref|NP_001075331.1| ubiquitin C [Equus caballus]
 gi|302393801|sp|Q8MKD1.3|UBB_HORSE RecName: Full=Polyubiquitin-B; Contains: RecName: Full=Ubiquitin;
           Contains: RecName: Full=Ubiquitin-related; Flags:
           Precursor
 gi|21070215|gb|AAM34211.1|AF506969_1 ubiquitin [Equus caballus]
          Length = 305

 Score =  159 bits (403), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 165/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +       G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRFIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  130 bits (327), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 130/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QR +F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRFIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  106 bits (265), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 74/216 (34%), Positives = 122/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +    + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRFIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 302


>gi|392597236|gb|EIW86558.1| polyubiquitin [Coniophora puteana RWD-64-598 SS2]
          Length = 305

 Score =  159 bits (403), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  131 bits (329), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  106 bits (265), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 72/216 (33%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 302


>gi|321263887|ref|XP_003196661.1| ATP-dependent protein binding protein [Cryptococcus gattii WM276]
 gi|317463138|gb|ADV24874.1| ATP-dependent protein binding protein, putative [Cryptococcus
           gattii WM276]
          Length = 381

 Score =  159 bits (403), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  159 bits (401), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  131 bits (329), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  106 bits (265), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 72/216 (33%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 378


>gi|56754831|gb|AAW25598.1| unknown [Schistosoma japonicum]
          Length = 381

 Score =  159 bits (403), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  +       P 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIHDKEGIPPD 267

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   +F  G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 268 QQRSIF-AGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  159 bits (402), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 165/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QR +F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIHDKEGIPPDQQRSIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 74/219 (33%), Positives = 122/219 (55%), Gaps = 8/219 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I  +EGIP  +    + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIHDKEGIPPDQQRSIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSI 215
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  +
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGL 381


>gi|393245214|gb|EJD52725.1| ubiquitin [Auricularia delicata TFB-10046 SS5]
          Length = 305

 Score =  159 bits (403), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  106 bits (265), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 72/216 (33%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 302


>gi|146421245|ref|XP_001486573.1| ubiquitin [Meyerozyma guilliermondii ATCC 6260]
 gi|146389988|gb|EDK38146.1| ubiquitin [Meyerozyma guilliermondii ATCC 6260]
          Length = 457

 Score =  159 bits (403), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  159 bits (403), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  159 bits (403), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 403 IDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  105 bits (263), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 72/212 (33%), Positives = 121/212 (57%), Gaps = 8/212 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQII 208
           +   L   G+QL++ +TL+ Y+I++   L ++
Sbjct: 419 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 450


>gi|254574192|ref|XP_002494205.1| Ubiquitin [Komagataella pastoris GS115]
 gi|238034004|emb|CAY72026.1| Ubiquitin [Komagataella pastoris GS115]
          Length = 310

 Score =  159 bits (403), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  131 bits (330), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  105 bits (263), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 72/216 (33%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 302


>gi|320580936|gb|EFW95158.1| Ubiquitin C variant [Ogataea parapolymorpha DL-1]
          Length = 761

 Score =  159 bits (403), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  159 bits (403), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  159 bits (403), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 403 IDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449



 Score =  159 bits (403), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 419 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 478

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 479 IDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 525



 Score =  159 bits (403), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 319 LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 377 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 435

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 436 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 494

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 495 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 554

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 555 IDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 601



 Score =  156 bits (394), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 104/287 (36%), Positives = 165/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 471 LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 528

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 529 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 587

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +V+  ++  +  IP 
Sbjct: 588 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVESEIQD-KEGIPP 646

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 647 DQRRLIFAGMQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 706

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 707 IDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 753



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  101 bits (251), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 70/216 (32%), Positives = 122/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 547 LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 604

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N++  I+ +EGIP  +  + + G  +E   T
Sbjct: 605 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVESEIQDKEGIPPDQRRLIFAGMQLEDGRT 663

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 664 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 722

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 723 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 758


>gi|374717833|gb|AEZ66647.1| putative beta-1,6-glucanase [Wickerhamomyces anomalus]
 gi|374717835|gb|AEZ66648.1| putative beta-1,6-glucanase [Wickerhamomyces anomalus]
          Length = 381

 Score =  159 bits (403), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  159 bits (403), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  132 bits (331), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  105 bits (263), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 72/216 (33%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 378


>gi|67523087|ref|XP_659604.1| hypothetical protein AN2000.2 [Aspergillus nidulans FGSC A4]
 gi|40744745|gb|EAA63901.1| hypothetical protein AN2000.2 [Aspergillus nidulans FGSC A4]
          Length = 323

 Score =  159 bits (403), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 33  LEVESSDTIDNVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 90

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 91  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 149

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 150 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 208

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 209 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 268

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 269 IDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 315



 Score =  132 bits (332), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 83/224 (37%), Positives = 132/224 (58%), Gaps = 5/224 (2%)

Query: 61  VMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDV 120
           +M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL  
Sbjct: 18  IMQIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 76

Query: 121 LNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDC 179
            NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +  
Sbjct: 77  YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQD-KEGIPPDQQ 135

Query: 180 ELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRD 237
            L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +
Sbjct: 136 RLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDN 195

Query: 238 VKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 196 VKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 239



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 72/216 (33%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 109 LEVESSDTIDNVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 166

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 167 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 225

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 226 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQD-KEGIPP 284

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 285 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 320


>gi|393218664|gb|EJD04152.1| polyubiquitin [Fomitiporia mediterranea MF3/22]
          Length = 321

 Score =  159 bits (403), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 106/292 (36%), Positives = 168/292 (57%), Gaps = 10/292 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDTVKNKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+ +K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDTVKNKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+  VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDTVKNKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNLTDLGM 286
           +  VK+K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L +LG+
Sbjct: 251 IDTVKNKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLGELGL 302



 Score =  128 bits (321), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 82/223 (36%), Positives = 129/223 (57%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+ +K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDTVKNKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+  VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDTVKNKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+  V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDTV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K+K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KNKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221


>gi|225682563|gb|EEH20847.1| ubiquitin [Paracoccidioides brasiliensis Pb03]
          Length = 305

 Score =  159 bits (403), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 165/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+  + I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESVDTIDSVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLTDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  127 bits (318), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 81/223 (36%), Positives = 130/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+    DTI+++K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESVDTIDSVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLTDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  105 bits (263), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 72/212 (33%), Positives = 121/212 (57%), Gaps = 8/212 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQII 208
           +   L   G+QL++ +TL+ Y+I++   L ++
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298


>gi|226473056|emb|CAX71214.1| polyubiquitin [Schistosoma japonicum]
          Length = 304

 Score =  159 bits (403), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  +   +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIPD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++   +    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRFRGGMQIFVKTLTGKTITLEVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  132 bits (332), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIPDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 74/216 (34%), Positives = 122/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I  +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIPDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRFRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 302


>gi|119500448|ref|XP_001266981.1| polyubiquitin (UbiD), putative [Neosartorya fischeri NRRL 181]
 gi|121707680|ref|XP_001271909.1| polyubiquitin (UbiD), putative [Aspergillus clavatus NRRL 1]
 gi|119400057|gb|EAW10483.1| polyubiquitin (UbiD), putative [Aspergillus clavatus NRRL 1]
 gi|119415146|gb|EAW25084.1| polyubiquitin (UbiD), putative [Neosartorya fischeri NRRL 181]
          Length = 305

 Score =  159 bits (402), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  131 bits (330), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  105 bits (263), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 72/216 (33%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 302


>gi|193678764|ref|XP_001950434.1| PREDICTED: polyubiquitin-A-like [Acyrthosiphon pisum]
          Length = 686

 Score =  159 bits (402), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 104/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDSIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SD+IEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + ++ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDSIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   D+
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDS 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  159 bits (402), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 104/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDSIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SD+IEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + ++ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDSIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   D+
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDS 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  159 bits (402), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 104/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVESSDSIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SD+IEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + ++ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDSIENVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   D+
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDS 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 403 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449



 Score =  159 bits (402), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 104/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVESSDSIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SD+IEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + ++ +VK  ++  +  IP 
Sbjct: 360 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDSIENVKAKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   D+
Sbjct: 419 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDS 478

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 479 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 525



 Score =  159 bits (402), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 104/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 319 LEVESSDSIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SD+IEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 377 LRGGMQIFVKTLTG-KTITLEVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 435

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + ++ +VK  ++  +  IP 
Sbjct: 436 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDSIENVKAKIQD-KEGIPP 494

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   D+
Sbjct: 495 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDS 554

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 555 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 601



 Score =  159 bits (402), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 104/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 395 LEVESSDSIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 452

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SD+IEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 453 LRGGMQIFVKTLTG-KTITLEVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 511

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + ++ +VK  ++  +  IP 
Sbjct: 512 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDSIENVKAKIQD-KEGIPP 570

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   D+
Sbjct: 571 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDS 630

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 631 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 677



 Score =  129 bits (325), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 81/223 (36%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SD+IEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + ++ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDSIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   D++ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDSIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  107 bits (266), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 72/216 (33%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 471 LEVESSDSIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 528

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SD+IEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 529 LRGGMQIFVKTLTG-KTITLEVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 587

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + ++ +VK  ++  +  IP 
Sbjct: 588 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDSIENVKAKIQD-KEGIPP 646

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 647 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 682


>gi|169844322|ref|XP_001828882.1| ubiquitin C [Coprinopsis cinerea okayama7#130]
 gi|170084089|ref|XP_001873268.1| ubiquitin [Laccaria bicolor S238N-H82]
 gi|302695715|ref|XP_003037536.1| hypothetical protein SCHCODRAFT_64979 [Schizophyllum commune H4-8]
 gi|116509994|gb|EAU92889.1| ubiquitin C [Coprinopsis cinerea okayama7#130]
 gi|164650820|gb|EDR15060.1| ubiquitin [Laccaria bicolor S238N-H82]
 gi|300111233|gb|EFJ02634.1| hypothetical protein SCHCODRAFT_64979 [Schizophyllum commune H4-8]
 gi|336385372|gb|EGO26519.1| hypothetical protein SERLADRAFT_385284 [Serpula lacrymans var.
           lacrymans S7.9]
 gi|390604125|gb|EIN13516.1| ubiquitin [Punctularia strigosozonata HHB-11173 SS5]
 gi|409083376|gb|EKM83733.1| hypothetical protein AGABI1DRAFT_81473 [Agaricus bisporus var.
           burnettii JB137-S8]
 gi|426201575|gb|EKV51498.1| ubiquitin [Agaricus bisporus var. bisporus H97]
 gi|443894847|dbj|GAC72194.1| ubiquitin and ubiquitin-like proteins [Pseudozyma antarctica T-34]
          Length = 305

 Score =  159 bits (402), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  106 bits (265), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 72/216 (33%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 302


>gi|302680697|ref|XP_003030030.1| polyubiquitin [Schizophyllum commune H4-8]
 gi|2739333|gb|AAB94630.1| polyubiquitin [Schizophyllum commune]
 gi|300103721|gb|EFI95127.1| polyubiquitin [Schizophyllum commune H4-8]
 gi|328770661|gb|EGF80702.1| polyubiquitin [Batrachochytrium dendrobatidis JAM81]
 gi|409044635|gb|EKM54116.1| hypothetical protein PHACADRAFT_257732 [Phanerochaete carnosa
           HHB-10118-sp]
          Length = 305

 Score =  159 bits (402), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  131 bits (329), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  107 bits (266), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 72/219 (32%), Positives = 124/219 (56%), Gaps = 8/219 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSI 215
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  +
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGL 305


>gi|366992347|ref|XP_003675939.1| hypothetical protein NCAS_0C05850 [Naumovozyma castellii CBS 4309]
 gi|342301804|emb|CCC69575.1| hypothetical protein NCAS_0C05850 [Naumovozyma castellii CBS 4309]
          Length = 388

 Score =  159 bits (402), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  159 bits (402), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  131 bits (330), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 72/219 (32%), Positives = 124/219 (56%), Gaps = 8/219 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSI 215
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  +
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 381


>gi|119192382|ref|XP_001246797.1| polyubiquitin [Coccidioides immitis RS]
 gi|145258352|ref|XP_001402015.1| ubiquitin [Aspergillus niger CBS 513.88]
 gi|258573789|ref|XP_002541076.1| ubiquitin [Uncinocarpus reesii 1704]
 gi|296808323|ref|XP_002844500.1| polyubiquitin [Arthroderma otae CBS 113480]
 gi|303312875|ref|XP_003066449.1| polyubiquitin, putative [Coccidioides posadasii C735 delta SOWgp]
 gi|134074621|emb|CAK44654.1| unnamed protein product [Aspergillus niger]
 gi|237901342|gb|EEP75743.1| ubiquitin [Uncinocarpus reesii 1704]
 gi|238843983|gb|EEQ33645.1| polyubiquitin [Arthroderma otae CBS 113480]
 gi|240106111|gb|EER24304.1| polyubiquitin, putative [Coccidioides posadasii C735 delta SOWgp]
 gi|350632449|gb|EHA20817.1| hypothetical protein ASPNIDRAFT_214265 [Aspergillus niger ATCC
           1015]
 gi|392863964|gb|EJB10724.1| polyubiquitin [Coccidioides immitis RS]
          Length = 305

 Score =  159 bits (402), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  131 bits (329), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  105 bits (263), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 72/216 (33%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 302


>gi|449662449|ref|XP_004205543.1| PREDICTED: polyubiquitin-B-like isoform 1 [Hydra magnipapillata]
 gi|449665888|ref|XP_002158413.2| PREDICTED: polyubiquitin-like [Hydra magnipapillata]
          Length = 380

 Score =  159 bits (402), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 165/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+  + IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEAADTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   +DTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPADTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  A T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPADTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPADT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  157 bits (398), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 165/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+  + I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEPADTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   +DTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEPADTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  A T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPADTIDNVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPADT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  132 bits (332), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   +DTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEAADTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  A T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPADTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPADTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  104 bits (260), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 72/218 (33%), Positives = 122/218 (55%), Gaps = 8/218 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+  + I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVEPADTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   +DTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVEPADTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  A T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPADTIDNVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 380


>gi|241953793|ref|XP_002419618.1| ubiquitin, putative [Candida dubliniensis CD36]
 gi|302595951|sp|P0CG74.1|UBI4P_CANAL RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
           Flags: Precursor
 gi|2437825|emb|CAA90901.1| polyubiquitin [Candida albicans]
 gi|223642958|emb|CAX43214.1| ubiquitin, putative [Candida dubliniensis CD36]
          Length = 305

 Score =  159 bits (402), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  131 bits (330), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  105 bits (263), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 72/216 (33%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 302


>gi|213401917|ref|XP_002171731.1| ubiquitin [Schizosaccharomyces japonicus yFS275]
 gi|211999778|gb|EEB05438.1| ubiquitin [Schizosaccharomyces japonicus yFS275]
          Length = 382

 Score =  159 bits (402), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  159 bits (402), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  131 bits (330), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 72/220 (32%), Positives = 124/220 (56%), Gaps = 8/220 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSIF 216
           +   L   G+QL++ +TL+ Y+I++   L ++  ++   +
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGYY 382


>gi|19112201|ref|NP_595409.1| ubiquitin [Schizosaccharomyces pombe 972h-]
 gi|302595955|sp|P0CG72.1|UBI4P_SCHPO RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
           Flags: Precursor
 gi|3738185|emb|CAA21278.1| ubiquitin [Schizosaccharomyces pombe]
          Length = 382

 Score =  159 bits (402), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  159 bits (402), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  131 bits (330), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  109 bits (272), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 73/220 (33%), Positives = 125/220 (56%), Gaps = 8/220 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSIF 216
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  +F
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGLF 382


>gi|194944118|ref|XP_001983129.1| GG19855 [Drosophila erecta]
 gi|190647611|gb|EDV45009.1| GG19855 [Drosophila erecta]
          Length = 328

 Score =  159 bits (402), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 106/282 (37%), Positives = 162/282 (57%), Gaps = 10/282 (3%)

Query: 6   TEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---NDSGVM 62
           ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H      G M
Sbjct: 2   SDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 59

Query: 63  KLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLN 122
           +++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   N
Sbjct: 60  QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 118

Query: 123 INNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCEL 181
           I  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L
Sbjct: 119 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQRL 177

Query: 182 FRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVK 239
              G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK
Sbjct: 178 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVK 237

Query: 240 DKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
            K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 238 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 279



 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 89/248 (35%), Positives = 142/248 (57%), Gaps = 10/248 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 73  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 130

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 131 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 189

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 190 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 248

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 249 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 308

Query: 235 VRDVKDKL 242
           + +VK K+
Sbjct: 309 IENVKAKI 316



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 64/175 (36%), Positives = 99/175 (56%), Gaps = 7/175 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 149 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 206

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 207 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 265

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMR 171
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  R
Sbjct: 266 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDRR 320



 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/102 (38%), Positives = 58/102 (56%), Gaps = 6/102 (5%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 225 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 282

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIP 99
             G M+++ KT +  KT  L+   SDTIEN+K  I+ R   P
Sbjct: 283 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDRRESP 323


>gi|27806505|ref|NP_776558.1| polyubiquitin-B [Bos taurus]
 gi|645|emb|CAA79146.1| polyubiquitin [Bos taurus]
          Length = 305

 Score =  159 bits (402), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LFDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  130 bits (326), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 130/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL  Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLFDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  108 bits (269), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 74/218 (33%), Positives = 123/218 (56%), Gaps = 8/218 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLFDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 304


>gi|169847035|ref|XP_001830230.1| ubiquitin [Coprinopsis cinerea okayama7#130]
 gi|116508706|gb|EAU91601.1| ubiquitin [Coprinopsis cinerea okayama7#130]
          Length = 305

 Score =  159 bits (402), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  131 bits (329), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  106 bits (265), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 72/216 (33%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 302


>gi|156101796|ref|XP_001616591.1| polyubiquitin 5 [Plasmodium vivax Sal-1]
 gi|148805465|gb|EDL46864.1| polyubiquitin 5, putative [Plasmodium vivax]
          Length = 381

 Score =  159 bits (402), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LDVESSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLDVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVESSDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I L+V   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVESSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  159 bits (401), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LDVESSDTIENVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLDVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVESSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I L+V   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  130 bits (326), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 82/223 (36%), Positives = 130/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLDVESSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVESSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I L+V   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVESSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  107 bits (266), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 73/216 (33%), Positives = 121/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LDVESSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLDVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVESSDTIENVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 378


>gi|221059958|ref|XP_002260624.1| ubiquitin [Plasmodium knowlesi strain H]
 gi|193810698|emb|CAQ42596.1| ubiquitin, putative [Plasmodium knowlesi strain H]
          Length = 609

 Score =  159 bits (402), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LDVESSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLDVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVESSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I L+V   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  159 bits (402), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LDVESSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLDVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVESSDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I L+V   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVESSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  159 bits (402), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LDVESSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLDVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVESSDTIENVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I L+V   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVESSDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 403 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449



 Score =  159 bits (402), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LDVESSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLDVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP 
Sbjct: 360 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVESSDTIENVKAKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I L+V   DT
Sbjct: 419 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVESSDT 478

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 479 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 525



 Score =  159 bits (402), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 319 LDVESSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 377 LRGGMQIFVKTLTG-KTITLDVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 435

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP 
Sbjct: 436 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVESSDTIENVKAKIQD-KEGIPP 494

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I L+V   DT
Sbjct: 495 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVESSDT 554

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 555 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 601



 Score =  130 bits (327), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 82/223 (36%), Positives = 130/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLDVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVESSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I L+V   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVESSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  107 bits (266), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 73/216 (33%), Positives = 121/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 395 LDVESSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 452

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 453 LRGGMQIFVKTLTG-KTITLDVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 511

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP 
Sbjct: 512 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVESSDTIENVKAKIQD-KEGIPP 570

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 571 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 606


>gi|322699454|gb|EFY91215.1| ubiquitin [Metarhizium acridum CQMa 102]
          Length = 343

 Score =  159 bits (402), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 53  LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 110

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 111 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 169

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 170 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 228

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 229 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 288

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 289 IDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 335



 Score =  132 bits (332), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 86/233 (36%), Positives = 136/233 (58%), Gaps = 6/233 (2%)

Query: 52  NSVIHNDSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKL 111
           +S I  D+  M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK 
Sbjct: 30  HSDIQTDA-AMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQ 87

Query: 112 IESYITLDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESM 170
           +E   TL   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  
Sbjct: 88  LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD- 146

Query: 171 RICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILE 228
           +  IP +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LE
Sbjct: 147 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 206

Query: 229 VAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           V   DT+ +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 207 VESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 259



 Score =  105 bits (263), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 72/212 (33%), Positives = 121/212 (57%), Gaps = 8/212 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 129 LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 186

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 187 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 245

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 246 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 304

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQII 208
           +   L   G+QL++ +TL+ Y+I++   L ++
Sbjct: 305 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 336



 Score = 67.0 bits (162), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 41/102 (40%), Positives = 57/102 (55%), Gaps = 15/102 (14%)

Query: 195 AYYDIKENEVL------QIIRHVKHS---------IFVKLLNGRYIILEVAKFDTVRDVK 239
           AY+ ++  + L      QI +H +HS         IFVK L G+ I LEV   DT+ +VK
Sbjct: 6   AYFGVRMCKYLRLPLISQIDKHSEHSDIQTDAAMQIFVKTLTGKTITLEVESSDTIDNVK 65

Query: 240 DKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
            K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 66  SKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 107


>gi|302918054|ref|XP_003052575.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256733515|gb|EEU46862.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 305

 Score =  159 bits (402), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  133 bits (334), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  106 bits (265), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 72/216 (33%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 302


>gi|396492504|ref|XP_003843815.1| hypothetical protein LEMA_P014660.1 [Leptosphaeria maculans JN3]
 gi|312220395|emb|CBY00336.1| hypothetical protein LEMA_P014660.1 [Leptosphaeria maculans JN3]
          Length = 395

 Score =  159 bits (402), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 105 LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 162

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 163 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 221

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 222 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 280

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 281 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 340

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 341 IDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 387



 Score =  131 bits (330), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 91  MQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 149

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 150 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPPDQQR 208

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 209 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 268

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 269 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 311



 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 72/216 (33%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 181 LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 238

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 239 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 297

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 298 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 356

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 357 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 392



 Score = 68.9 bits (167), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 41/108 (37%), Positives = 54/108 (50%), Gaps = 1/108 (0%)

Query: 175 PSEDCELFRGGEQLQNLKTLAYYDIKENEVLQII-RHVKHSIFVKLLNGRYIILEVAKFD 233
           P   C +  G      L T A       +V   +    K  IFVK L G+ I LEV   D
Sbjct: 52  PERSCPVGTGTGAFTRLVTAAGTQHPPTQVFNTLYTRAKMQIFVKTLTGKTITLEVESSD 111

Query: 234 TVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           T+ +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 112 TIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 159


>gi|336372565|gb|EGO00904.1| hypothetical protein SERLA73DRAFT_178893 [Serpula lacrymans var.
           lacrymans S7.3]
          Length = 312

 Score =  159 bits (402), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  130 bits (328), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 72/212 (33%), Positives = 121/212 (57%), Gaps = 8/212 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQII 208
           +   L   G+QL++ +TL+ Y+I++   L ++
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298



 Score = 78.2 bits (191), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 50/137 (36%), Positives = 78/137 (56%), Gaps = 6/137 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISV 134
           L   NI  E TL ++ V
Sbjct: 284 LSDYNIQKESTLHLVFV 300


>gi|168028716|ref|XP_001766873.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162681852|gb|EDQ68275.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 344

 Score =  159 bits (402), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 165/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   +I  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYSIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYSIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 251 IDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 297



 Score =  132 bits (332), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 130/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYSIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYSIQKESTLHL 221



 Score =  109 bits (273), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 77/234 (32%), Positives = 130/234 (55%), Gaps = 8/234 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYSIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   +I  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LADYSIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSIFVKLLNGRYIILEVA 230
           +   L   G+QL++ +TLA Y+I++   L ++  ++  I   + N R I +  A
Sbjct: 267 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGISDTVCNVRRIYISQA 320


>gi|290750644|gb|ADD52202.1| ubiquitin [Catharanthus roseus]
 gi|341869050|gb|AEK98798.1| ubiquitin [Carthamus tinctorius]
          Length = 381

 Score =  159 bits (402), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +   K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKTQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDT +N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTTDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADCNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 251 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 297



 Score =  154 bits (390), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 104/287 (36%), Positives = 163/287 (56%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++  + +K +I  K  E I  D   L +AG+QLE+G T+ D  I   S +H    
Sbjct: 91  LEVESSDTTDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADCNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+   +QLED R LA Y I  ES ++L
Sbjct: 327 IDNVKAKIQDKEGIPPDQQRLILAGKQLEDGRTLADYNIQKESTLHL 373



 Score =  127 bits (320), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 128/223 (57%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K   + +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKTQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T  +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTTDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA  +I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADCNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  108 bits (269), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 73/216 (33%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TLA Y+I++   L ++  ++
Sbjct: 343 DQQRLILAGKQLEDGRTLADYNIQKESTLHLVLRLR 378


>gi|157877206|ref|XP_001686933.1| putative polyubiquitin [Leishmania major strain Friedlin]
 gi|68130008|emb|CAJ09316.1| putative polyubiquitin [Leishmania major strain Friedlin]
          Length = 837

 Score =  159 bits (402), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 165/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE G T+ DY I   S +H    
Sbjct: 167 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDTIENVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL+  +TL+ Y+I++   L ++  ++    IFVK L G+ I+LEV   DT
Sbjct: 343 DQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIVLEVEPSDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLE+ R L+ Y I  ES ++L
Sbjct: 403 IENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHL 449



 Score =  157 bits (398), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL+  +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLE+ R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHL 297



 Score =  157 bits (398), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE G T+ DY I   S +H    
Sbjct: 91  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL+  +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLE+ R L+ Y I  ES ++L
Sbjct: 327 IENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHL 373



 Score =  157 bits (398), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE G T+ DY I   S +H    
Sbjct: 395 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLR 452

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 453 LRGGMQIFVKTLTG-KTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRT 511

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 512 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDTIENVKAKIQD-KEGIPP 570

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL+  +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 571 DQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDT 630

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLE+ R L+ Y I  ES ++L
Sbjct: 631 IENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHL 677



 Score =  157 bits (398), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE G T+ DY I   S +H    
Sbjct: 471 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLR 528

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 529 LRGGMQIFVKTLTG-KTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRT 587

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 588 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDTIENVKAKIQD-KEGIPP 646

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL+  +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 647 DQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDT 706

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLE+ R L+ Y I  ES ++L
Sbjct: 707 IENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHL 753



 Score =  157 bits (398), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE G T+ DY I   S +H    
Sbjct: 547 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLR 604

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 605 LRGGMQIFVKTLTG-KTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRT 663

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 664 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDTIENVKAKIQD-KEGIPP 722

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL+  +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 723 DQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDT 782

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLE+ R L+ Y I  ES ++L
Sbjct: 783 IENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHL 829



 Score =  157 bits (396), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE G T+ DY I   S +H    
Sbjct: 243 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIVLEVEPSDTIENVKAKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL+  +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 419 DQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDT 478

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLE+ R L+ Y I  ES ++L
Sbjct: 479 IENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHL 525



 Score =  157 bits (396), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE G T+ DY I   S +H    
Sbjct: 319 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLR 376

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 377 LRGGMQIFVKTLTG-KTIVLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRT 435

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 436 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDTIENVKAKIQD-KEGIPP 494

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL+  +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 495 DQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDT 554

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLE+ R L+ Y I  ES ++L
Sbjct: 555 IENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHL 601



 Score =  129 bits (325), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 130/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL+  +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLE+ R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHL 221



 Score =  105 bits (263), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 74/218 (33%), Positives = 121/218 (55%), Gaps = 8/218 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE G T+ DY I   S +H    
Sbjct: 623 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLR 680

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 681 LRGGMQIFVKTLTG-KTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRT 739

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 740 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDTIENVKAKIQD-KEGIPP 798

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
           +   L   G+QL+  +TL+ Y+I++   L ++  ++  
Sbjct: 799 DQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGG 836


>gi|296425005|ref|XP_002842034.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295638291|emb|CAZ86225.1| unnamed protein product [Tuber melanosporum]
          Length = 305

 Score =  159 bits (402), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKGKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKGKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IDNVKGKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  131 bits (330), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKGKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KGKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  105 bits (263), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 72/219 (32%), Positives = 124/219 (56%), Gaps = 8/219 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKGKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKGKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKGKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSI 215
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  +
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 305


>gi|576773|gb|AAA82978.1| polyubiquitin [Cryptococcus neoformans var. grubii]
          Length = 381

 Score =  159 bits (401), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 165/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL + +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLDDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  158 bits (400), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 104/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK ++   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLDDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  130 bits (327), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 82/223 (36%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QL+D R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLDDGRTLSDYNIQKESTLHL 221



 Score =  105 bits (263), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 71/219 (32%), Positives = 124/219 (56%), Gaps = 8/219 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QL++G T+ DY I   S +H    
Sbjct: 167 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLDDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSI 215
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  +
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 381


>gi|384493519|gb|EIE84010.1| polyubiquitin [Rhizopus delemar RA 99-880]
          Length = 305

 Score =  159 bits (401), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 104/287 (36%), Positives = 167/287 (58%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDSIENVKQKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SD+IEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDSIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + ++ +VK+ ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDSIENVKQKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   D+
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDS 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  129 bits (325), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 81/223 (36%), Positives = 132/223 (59%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SD+IEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDSIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + ++ +VK+ ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDSIENVKQKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   D++ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDSIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  106 bits (265), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 72/212 (33%), Positives = 122/212 (57%), Gaps = 8/212 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDSIENVKQKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SD+IEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDSIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + ++ +VK+ ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDSIENVKQKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQII 208
           +   L   G+QL++ +TL+ Y+I++   L ++
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298


>gi|154339611|ref|XP_001562497.1| polyubiquitin, putative [Leishmania braziliensis MHOM/BR/75/M2904]
 gi|134063080|emb|CAM39530.1| polyubiquitin, putative [Leishmania braziliensis MHOM/BR/75/M2904]
          Length = 1068

 Score =  159 bits (401), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE G T+ DY I   S +H    
Sbjct: 167 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL+  +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLE+ R L+ Y I  ES ++L
Sbjct: 403 IENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHL 449



 Score =  159 bits (401), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE G T+ DY I   S +H    
Sbjct: 91  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL+  +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLE+ R L+ Y I  ES ++L
Sbjct: 327 IENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHL 373



 Score =  159 bits (401), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE G T+ DY I   S +H    
Sbjct: 243 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL+  +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 419 DQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDT 478

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLE+ R L+ Y I  ES ++L
Sbjct: 479 IENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHL 525



 Score =  158 bits (400), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE G T+ DY I   S +H    
Sbjct: 15  LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL+  +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLE+ R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHL 297



 Score =  158 bits (400), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE G T+ DY I   S +H    
Sbjct: 319 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLR 376

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 377 LRGGMQIFVKTLTG-KTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRT 435

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 436 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDTIENVKAKIQD-KEGIPP 494

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL+  +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 495 DQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDT 554

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLE+ R L+ Y I  ES ++L
Sbjct: 555 IENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHL 601



 Score =  158 bits (400), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE G T+ DY I   S +H    
Sbjct: 395 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLR 452

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 453 LRGGMQIFVKTLTG-KTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRT 511

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 512 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAKIQD-KEGIPP 570

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL+  +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 571 DQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDT 630

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLE+ R L+ Y I  ES ++L
Sbjct: 631 IENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHL 677



 Score =  158 bits (400), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE G T+ DY I   S +H    
Sbjct: 471 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLR 528

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 529 LRGGMQIFVKTLTG-KTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRT 587

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 588 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAKIQD-KEGIPP 646

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL+  +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 647 DQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDT 706

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLE+ R L+ Y I  ES ++L
Sbjct: 707 IENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHL 753



 Score =  158 bits (400), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE G T+ DY I   S +H    
Sbjct: 547 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLR 604

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 605 LRGGMQIFVKTLTG-KTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRT 663

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 664 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDTIENVKAKIQD-KEGIPP 722

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL+  +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 723 DQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDT 782

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLE+ R L+ Y I  ES ++L
Sbjct: 783 IENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHL 829



 Score =  158 bits (399), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE G T+ DY I   S +H    
Sbjct: 623 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLR 680

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 681 LRGGMQIFVKTLTG-KTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRT 739

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 740 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDTIENVKAKIQD-KEGIPP 798

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL+  +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 799 DQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDT 858

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLE+ R L+ Y I  ES ++L
Sbjct: 859 IENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHL 905



 Score =  158 bits (399), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE G T+ DY I   S +H    
Sbjct: 699 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLR 756

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 757 LRGGMQIFVKTLTG-KTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRT 815

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 816 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAKIQD-KEGIPP 874

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL+  +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 875 DQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDT 934

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLE+ R L+ Y I  ES ++L
Sbjct: 935 IENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHL 981



 Score =  158 bits (399), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1    MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
            ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE G T+ DY I   S +H    
Sbjct: 775  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLR 832

Query: 58   DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
              G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 833  LRGGMQIFVKTLTG-KTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRT 891

Query: 118  LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
            L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 892  LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDTIENVKAKIQD-KEGIPP 950

Query: 177  EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
            +   L   G+QL+  +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 951  DQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDT 1010

Query: 235  VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
            + +VK K+  + G  PD QRL+F  +QLE+ R L+ Y I  ES ++L
Sbjct: 1011 IENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHL 1057



 Score =  130 bits (327), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 130/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL+  +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLE+ R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHL 221



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 74/216 (34%), Positives = 121/216 (56%), Gaps = 8/216 (3%)

Query: 1    MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
            ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE G T+ DY I   S +H    
Sbjct: 851  LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLR 908

Query: 58   DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
              G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 909  LRGGMQIFVKTLTG-KTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRT 967

Query: 118  LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
            L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 968  LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDTIENVKAKIQD-KEGIPP 1026

Query: 177  EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
            +   L   G+QL+  +TL+ Y+I++   L ++  ++
Sbjct: 1027 DQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLR 1062


>gi|255714909|ref|XP_002553736.1| KLTH0E05852p [Lachancea thermotolerans]
 gi|238935118|emb|CAR23299.1| KLTH0E05852p [Lachancea thermotolerans CBS 6340]
          Length = 409

 Score =  159 bits (401), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 119 LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 176

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 177 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 235

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 236 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 294

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 295 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 354

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 355 IDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 401



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 94/280 (33%), Positives = 148/280 (52%), Gaps = 27/280 (9%)

Query: 17  HAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIHNDS------------GVMKL 64
           H  +  + LE LP L          LT   +  P+    +ND+              M++
Sbjct: 58  HRSINTKELEYLPPL----------LTAERHSFPSVKASNNDTRKRLTERKTQARDTMQI 107

Query: 65  YFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNIN 124
           + KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   NI 
Sbjct: 108 FVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 166

Query: 125 NEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFR 183
            E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L  
Sbjct: 167 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPPDQQRLIF 225

Query: 184 GGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDK 241
            G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K
Sbjct: 226 AGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSK 285

Query: 242 LFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           +  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 286 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 325



 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 72/212 (33%), Positives = 121/212 (57%), Gaps = 8/212 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 195 LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 252

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 253 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 311

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 312 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 370

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQII 208
           +   L   G+QL++ +TL+ Y+I++   L ++
Sbjct: 371 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 402


>gi|226289971|gb|EEH45455.1| ubiquitin [Paracoccidioides brasiliensis Pb18]
          Length = 305

 Score =  159 bits (401), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 165/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+  + I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESVDTIDSVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  127 bits (319), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 81/223 (36%), Positives = 130/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+    DTI+++K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESVDTIDSVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  105 bits (263), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 72/212 (33%), Positives = 121/212 (57%), Gaps = 8/212 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQII 208
           +   L   G+QL++ +TL+ Y+I++   L ++
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298


>gi|118484244|gb|ABK94002.1| unknown [Populus trichocarpa]
          Length = 305

 Score =  159 bits (401), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 165/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ D  I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADNNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 251 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 297



 Score =  132 bits (333), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADN 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  108 bits (269), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 73/218 (33%), Positives = 123/218 (56%), Gaps = 8/218 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
           +   L   G+QL++ +TLA Y+I++   L ++  ++  
Sbjct: 267 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 304


>gi|118370590|ref|XP_001018496.1| Ubiquitin family protein [Tetrahymena thermophila]
 gi|118370606|ref|XP_001018504.1| Ubiquitin family protein [Tetrahymena thermophila]
 gi|89300263|gb|EAR98251.1| Ubiquitin family protein [Tetrahymena thermophila SB210]
 gi|89300271|gb|EAR98259.1| Ubiquitin family protein [Tetrahymena thermophila SB210]
          Length = 304

 Score =  159 bits (401), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LDVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I L+V   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  130 bits (326), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 82/223 (36%), Positives = 130/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I L+V   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  106 bits (265), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 73/216 (33%), Positives = 121/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LDVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 302


>gi|118358270|ref|XP_001012381.1| Ubiquitin family protein [Tetrahymena thermophila]
 gi|118364888|ref|XP_001015665.1| Ubiquitin family protein [Tetrahymena thermophila]
 gi|1778712|gb|AAC47430.1| polyubiquitin [Tetrahymena thermophila]
 gi|89294148|gb|EAR92136.1| Ubiquitin family protein [Tetrahymena thermophila SB210]
 gi|89297432|gb|EAR95420.1| Ubiquitin family protein [Tetrahymena thermophila SB210]
          Length = 381

 Score =  159 bits (401), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LDVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I L+V   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  159 bits (401), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LDVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I L+V   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  130 bits (326), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 82/223 (36%), Positives = 130/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I L+V   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  106 bits (265), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 73/218 (33%), Positives = 121/218 (55%), Gaps = 8/218 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LDVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 380


>gi|154275270|ref|XP_001538486.1| polyubiquitin [Ajellomyces capsulatus NAm1]
 gi|150414926|gb|EDN10288.1| polyubiquitin [Ajellomyces capsulatus NAm1]
          Length = 305

 Score =  159 bits (401), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+  + I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LDVESADTIDAVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVENSDTIDNVKSKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  127 bits (319), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 81/223 (36%), Positives = 129/223 (57%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L    +DTI+ +K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLDVESADTIDAVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVENSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 72/212 (33%), Positives = 121/212 (57%), Gaps = 8/212 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVENSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQII 208
           +   L   G+QL++ +TL+ Y+I++   L ++
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298


>gi|302595967|sp|P0CG82.1|UBIQP_TETPY RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
           Flags: Precursor
 gi|578547|emb|CAA43387.1| ubiquitin [Tetrahymena pyriformis]
          Length = 381

 Score =  159 bits (401), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LDVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I L+V   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  159 bits (401), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LDVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I L+V   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  130 bits (326), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 82/223 (36%), Positives = 130/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I L+V   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  106 bits (265), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 73/216 (33%), Positives = 121/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LDVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 378


>gi|294891345|ref|XP_002773533.1| polyubiquitin, putative [Perkinsus marinus ATCC 50983]
 gi|239878705|gb|EER05349.1| polyubiquitin, putative [Perkinsus marinus ATCC 50983]
          Length = 458

 Score =  158 bits (400), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LDVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I L+V   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  158 bits (400), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LDVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I L+V   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  158 bits (400), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LDVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I L+V   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 403 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449



 Score =  129 bits (325), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 82/223 (36%), Positives = 130/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I L+V   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  107 bits (266), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 73/220 (33%), Positives = 121/220 (55%), Gaps = 8/220 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LDVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP 
Sbjct: 360 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSIF 216
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    
Sbjct: 419 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGCL 458


>gi|290987764|ref|XP_002676592.1| polyubiquitin [Naegleria gruberi]
 gi|290995460|ref|XP_002680313.1| polyubiquitin [Naegleria gruberi]
 gi|284090195|gb|EFC43848.1| polyubiquitin [Naegleria gruberi]
 gi|284093933|gb|EFC47569.1| polyubiquitin [Naegleria gruberi]
          Length = 305

 Score =  158 bits (400), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+  + IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESNDTIENVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   +DTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESNDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV    T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESNDTIENVKSKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESNDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  130 bits (328), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 130/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   +DTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESNDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV    T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESNDTIENVKSKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESNDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  104 bits (260), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 73/216 (33%), Positives = 121/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+  + IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESNDTIENVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   +DTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESNDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV    T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESNDTIENVKSKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 302


>gi|294885539|ref|XP_002771351.1| polyubiquitin, putative [Perkinsus marinus ATCC 50983]
 gi|239874907|gb|EER03167.1| polyubiquitin, putative [Perkinsus marinus ATCC 50983]
          Length = 458

 Score =  158 bits (400), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LDVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I L+V   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  158 bits (400), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LDVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I L+V   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  155 bits (392), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 104/287 (36%), Positives = 163/287 (56%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LDVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L  + I L+V   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTDKTITLDVEASDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 403 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449



 Score =  129 bits (325), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 82/223 (36%), Positives = 130/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I L+V   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  106 bits (265), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 73/220 (33%), Positives = 121/220 (55%), Gaps = 8/220 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LDVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP 
Sbjct: 360 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTDKTITLDVEASDTIENVKAKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSIF 216
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    
Sbjct: 419 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGCL 458


>gi|197129051|gb|ACH45549.1| putative ubiquitin C variant 1 [Taeniopygia guttata]
          Length = 305

 Score =  158 bits (400), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G +PD QRL+F  +QLED R L+ Y I  E  ++L
Sbjct: 251 IENVKAKIQDKEGISPDQQRLIFAGKQLEDGRTLSDYNIQKELTLHL 297



 Score =  131 bits (330), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  103 bits (258), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 73/212 (34%), Positives = 120/212 (56%), Gaps = 8/212 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++      P 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGISPD 267

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQII 208
           +   +F  G+QL++ +TL+ Y+I++   L ++
Sbjct: 268 QQRLIF-AGKQLEDGRTLSDYNIQKELTLHLV 298


>gi|225558948|gb|EEH07231.1| ubiquitin [Ajellomyces capsulatus G186AR]
 gi|240281869|gb|EER45372.1| polyubiquitin [Ajellomyces capsulatus H143]
 gi|325088005|gb|EGC41315.1| polyubiquitin [Ajellomyces capsulatus H88]
          Length = 305

 Score =  158 bits (400), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+  + I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LDVESADTIDAVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  127 bits (319), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 81/223 (36%), Positives = 129/223 (57%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L    +DTI+ +K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLDVESADTIDAVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 72/212 (33%), Positives = 121/212 (57%), Gaps = 8/212 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQII 208
           +   L   G+QL++ +TL+ Y+I++   L ++
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298


>gi|154346116|ref|XP_001568995.1| putative polyubiquitin [Leishmania braziliensis MHOM/BR/75/M2904]
 gi|134066337|emb|CAM44128.1| putative polyubiquitin [Leishmania braziliensis MHOM/BR/75/M2904]
          Length = 992

 Score =  158 bits (400), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE G T+ DY I   S +H    
Sbjct: 395 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLR 452

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 453 LRGGMQIFVKTLTG-KTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRT 511

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 512 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAKIQD-KEGIPP 570

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL+  +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 571 DQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDT 630

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLE+ R L+ Y I  ES ++L
Sbjct: 631 IENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHL 677



 Score =  158 bits (400), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE G T+ DY I   S +H    
Sbjct: 471 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLR 528

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 529 LRGGMQIFVKTLTG-KTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRT 587

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 588 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDTIENVKAKIQD-KEGIPP 646

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL+  +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 647 DQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDT 706

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLE+ R L+ Y I  ES ++L
Sbjct: 707 IENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHL 753



 Score =  158 bits (400), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE G T+ DY I   S +H    
Sbjct: 699 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLR 756

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 757 LRGGMQIFVKTLTG-KTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRT 815

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 816 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAKIQD-KEGIPP 874

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL+  +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 875 DQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDT 934

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLE+ R L+ Y I  ES ++L
Sbjct: 935 IENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHL 981



 Score =  158 bits (400), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE G T+ DY I   S +H    
Sbjct: 319 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLR 376

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 377 LRGGMQIFVKTLTG-KTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRT 435

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 436 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAKIQD-KEGIPP 494

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL+  +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 495 DQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDT 554

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLE+ R L+ Y I  ES ++L
Sbjct: 555 IENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHL 601



 Score =  158 bits (400), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE G T+ DY I   S +H    
Sbjct: 547 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLR 604

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 605 LRGGMQIFVKTLTG-KTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRT 663

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 664 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAKIQD-KEGIPP 722

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL+  +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 723 DQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDT 782

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLE+ R L+ Y I  ES ++L
Sbjct: 783 IENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHL 829



 Score =  158 bits (400), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE G T+ DY I   S +H    
Sbjct: 623 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLR 680

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 681 LRGGMQIFVKTLTG-KTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRT 739

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 740 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDTIENVKAKIQD-KEGIPP 798

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL+  +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 799 DQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDT 858

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLE+ R L+ Y I  ES ++L
Sbjct: 859 IENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHL 905



 Score =  158 bits (399), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE G T+ DY I   S +H    
Sbjct: 15  LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL+  +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLE+ R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHL 297



 Score =  158 bits (399), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE G T+ DY I   S +H    
Sbjct: 91  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL+  +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLE+ R L+ Y I  ES ++L
Sbjct: 327 IENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHL 373



 Score =  158 bits (399), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE G T+ DY I   S +H    
Sbjct: 167 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDTIENVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL+  +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLE+ R L+ Y I  ES ++L
Sbjct: 403 IENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHL 449



 Score =  158 bits (399), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE G T+ DY I   S +H    
Sbjct: 243 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDTIENVKAKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL+  +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 419 DQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDT 478

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLE+ R L+ Y I  ES ++L
Sbjct: 479 IENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHL 525



 Score =  130 bits (326), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 130/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL+  +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLE+ R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHL 221



 Score =  107 bits (266), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 74/216 (34%), Positives = 121/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE G T+ DY I   S +H    
Sbjct: 775 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLR 832

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 833 LRGGMQIFVKTLTG-KTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRT 891

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 892 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAKIQD-KEGIPP 950

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL+  +TL+ Y+I++   L ++  ++
Sbjct: 951 DQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLR 986


>gi|395536358|ref|XP_003770187.1| PREDICTED: polyubiquitin-B [Sarcophilus harrisii]
          Length = 305

 Score =  158 bits (400), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++   L+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDXXXLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  128 bits (322), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 130/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED   L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDXXXLSDYNIQKESTLHL 221



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 73/216 (33%), Positives = 122/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E    
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDXXX 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 302


>gi|239611163|gb|EEQ88150.1| ubiquitin [Ajellomyces dermatitidis ER-3]
          Length = 305

 Score =  158 bits (400), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+  + I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LDVESGDTIDAVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  127 bits (319), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 81/223 (36%), Positives = 128/223 (57%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L     DTI+ +K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLDVESGDTIDAVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 72/216 (33%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 302


>gi|402898876|ref|XP_003919464.1| PREDICTED: LOW QUALITY PROTEIN: polyubiquitin-B [Papio anubis]
          Length = 305

 Score =  158 bits (399), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 165/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
               M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRXCMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  132 bits (333), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRXCMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  107 bits (266), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 74/216 (34%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 302


>gi|156064327|ref|XP_001598085.1| polyubiquitin [Sclerotinia sclerotiorum 1980]
 gi|154691033|gb|EDN90771.1| polyubiquitin [Sclerotinia sclerotiorum 1980 UF-70]
          Length = 305

 Score =  158 bits (399), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 165/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L  Y I  ES ++L
Sbjct: 251 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLLDYNIQKESTLHL 297



 Score =  131 bits (329), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  105 bits (261), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 72/216 (33%), Positives = 122/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL  Y+I++   L ++  ++
Sbjct: 267 DQQRLIFAGKQLEDGRTLLDYNIQKESTLHLVLRLR 302


>gi|367029699|ref|XP_003664133.1| hypothetical protein MYCTH_2315548 [Myceliophthora thermophila ATCC
           42464]
 gi|347011403|gb|AEO58888.1| hypothetical protein MYCTH_2315548 [Myceliophthora thermophila ATCC
           42464]
          Length = 305

 Score =  158 bits (399), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 163/287 (56%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+  + IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESADSIETVKNKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   +DTIE +K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESADTIETVKNKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  A T+  VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESADTIETVKNKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESADT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           +  VK+K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IETVKNKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  129 bits (323), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 82/223 (36%), Positives = 129/223 (57%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   +D+IE +K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESADSIETVKNKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  A T+  VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESADTIETVKNKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+  V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESADTIETV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K+K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KNKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  103 bits (257), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 73/216 (33%), Positives = 120/216 (55%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+  + IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESADTIETVKNKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   +DTIE +K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESADTIETVKNKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  A T+  VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESADTIETVKNKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 302


>gi|335345806|gb|AEH41483.1| ubiquitin [Endocarpon pusillum]
          Length = 305

 Score =  158 bits (399), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKEFTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  129 bits (323), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 82/223 (36%), Positives = 130/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  E  ++L
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEFTLHL 221



 Score =  104 bits (259), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 72/216 (33%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKEFTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 302


>gi|295661227|ref|XP_002791169.1| ubiquitin [Paracoccidioides sp. 'lutzii' Pb01]
 gi|226281096|gb|EEH36662.1| ubiquitin [Paracoccidioides sp. 'lutzii' Pb01]
          Length = 305

 Score =  158 bits (399), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+  + I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LDVESGDTIDGVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  128 bits (321), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 81/223 (36%), Positives = 128/223 (57%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L     DTI+ +K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLDVESGDTIDGVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  105 bits (263), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 72/212 (33%), Positives = 121/212 (57%), Gaps = 8/212 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQII 208
           +   L   G+QL++ +TL+ Y+I++   L ++
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298


>gi|449662451|ref|XP_004205544.1| PREDICTED: polyubiquitin-B-like isoform 2 [Hydra magnipapillata]
          Length = 304

 Score =  158 bits (399), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 165/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+  + I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPADTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   +DTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPADTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  A T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPADTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPADT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  130 bits (328), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   +DTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPADTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  A T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPADTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPADTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  105 bits (261), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 72/218 (33%), Positives = 122/218 (55%), Gaps = 8/218 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+  + I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEPADTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   +DTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEPADTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  A T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPADTIDNVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 304


>gi|440473707|gb|ELQ42489.1| RING finger protein [Magnaporthe oryzae Y34]
          Length = 1058

 Score =  158 bits (399), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  130 bits (327), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  103 bits (258), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 72/219 (32%), Positives = 124/219 (56%), Gaps = 8/219 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSI 215
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  +
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 305


>gi|170583349|ref|XP_001896539.1| ubiquitin [Brugia malayi]
 gi|158596243|gb|EDP34630.1| ubiquitin, putative [Brugia malayi]
          Length = 307

 Score =  158 bits (399), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 106/288 (36%), Positives = 165/288 (57%), Gaps = 10/288 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEASDTIENVKAKIQDK--EGIPADQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDT+EN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVETSDTVENVKAKIQDKEGIPPGQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T TS T+ LEV  + T+ +VK  V+      P 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGLQIFVKTLTSMTITLEVETSDTIENVKAKVQDKEGIPPD 191

Query: 177 EDCELFRGG-EQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFD 233
           +   +F G  +QL++ +T + Y+I++   L ++  ++    IFVK L G+ I LEV   D
Sbjct: 192 QQRLIFAGKRKQLEDGRTFSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASD 251

Query: 234 TVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           T+ +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 252 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 299



 Score =  127 bits (318), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 85/225 (37%), Positives = 129/225 (57%), Gaps = 7/225 (3%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPADQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + TV +VK  ++  +  IP     
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVETSDTVENVKAKIQD-KEGIPPGQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L    I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGLQIFVKTLTSMTITLEVETSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVF--KRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  KR+QLED R  + Y I  ES ++L
Sbjct: 179 KAKVQDKEGIPPDQQRLIFAGKRKQLEDGRTFSDYNIQKESTLHL 223



 Score = 94.4 bits (233), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 68/218 (31%), Positives = 121/218 (55%), Gaps = 10/218 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ +E +K +I  K  E I      L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVETSDTVENVKAKIQDK--EGIPPGQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKL--IESY 115
             G ++++ KT ++  T  L+   SDTIEN+K  ++ +EGIP  +  + + GK   +E  
Sbjct: 149 LRGGLQIFVKTLTS-MTITLEVETSDTIENVKAKVQDKEGIPPDQQRLIFAGKRKQLEDG 207

Query: 116 ITLDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICI 174
            T    NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  I
Sbjct: 208 RTFSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGI 266

Query: 175 PSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           P +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 267 PPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 304


>gi|440482103|gb|ELQ62622.1| RING finger protein [Magnaporthe oryzae P131]
          Length = 1056

 Score =  157 bits (398), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  130 bits (327), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  103 bits (258), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 72/219 (32%), Positives = 124/219 (56%), Gaps = 8/219 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSI 215
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  +
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 305


>gi|339899350|ref|XP_003392827.1| putative polyubiquitin [Leishmania infantum JPCM5]
 gi|321398786|emb|CBZ09034.1| putative polyubiquitin [Leishmania infantum JPCM5]
          Length = 684

 Score =  157 bits (398), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE G T+ DY I   S +H    
Sbjct: 91  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL+  +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLE+ R L+ Y I  ES ++L
Sbjct: 327 IENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHL 373



 Score =  157 bits (398), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE G T+ DY I   S +H    
Sbjct: 167 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDTIENVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL+  +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 343 DQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLE+ R L+ Y I  ES ++L
Sbjct: 403 IENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHL 449



 Score =  157 bits (398), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE G T+ DY I   S +H    
Sbjct: 243 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 360 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDTIENVKAKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL+  +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 419 DQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDT 478

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLE+ R L+ Y I  ES ++L
Sbjct: 479 IENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHL 525



 Score =  157 bits (398), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE G T+ DY I   S +H    
Sbjct: 319 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLR 376

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 377 LRGGMQIFVKTLTG-KTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRT 435

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 436 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDTIENVKAKIQD-KEGIPP 494

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL+  +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 495 DQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDT 554

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLE+ R L+ Y I  ES ++L
Sbjct: 555 IENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHL 601



 Score =  157 bits (398), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE G T+ DY I   S +H    
Sbjct: 395 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLR 452

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 453 LRGGMQIFVKTLTG-KTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRT 511

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 512 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDTIENVKAKIQD-KEGIPP 570

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL+  +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 571 DQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDT 630

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLE+ R L+ Y I  ES ++L
Sbjct: 631 IENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHL 677



 Score =  151 bits (381), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIHNDSG 60
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLLLR 72

Query: 61  V---MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
           +   M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL+  +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLE+ R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHL 297



 Score =  127 bits (318), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 130/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLLLRLRGGMQIFVKTLTGKTIALEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL+  +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLE+ R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHL 221



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 74/218 (33%), Positives = 121/218 (55%), Gaps = 8/218 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE G T+ DY I   S +H    
Sbjct: 471 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLR 528

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 529 LRGGMQIFVKTLTG-KTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRT 587

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 588 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDTIENVKAKIQD-KEGIPP 646

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
           +   L   G+QL+  +TL+ Y+I++   L ++  ++  
Sbjct: 647 DQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGG 684


>gi|387916118|gb|AFK11668.1| polyubiquitin-like protein [Callorhinchus milii]
          Length = 381

 Score =  157 bits (398), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 165/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFVGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++        
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPLD 267

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           + C +F  G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 268 QQCLIF-AGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  150 bits (380), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFVGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G   D Q L+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPLDQQCLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  130 bits (328), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFVGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  105 bits (263), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 73/218 (33%), Positives = 123/218 (56%), Gaps = 8/218 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L + G+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFVGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP+ +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPLDQQCLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 380


>gi|197129053|gb|ACH45551.1| putative ubiquitin C variant 1 [Taeniopygia guttata]
          Length = 305

 Score =  157 bits (398), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G    DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRRRADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  126 bits (316), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 82/223 (36%), Positives = 129/223 (57%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E        
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRRRADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  107 bits (267), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 74/218 (33%), Positives = 123/218 (56%), Gaps = 8/218 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 304


>gi|401412470|ref|XP_003885682.1| Ubiquitin, related [Neospora caninum Liverpool]
 gi|325120102|emb|CBZ55656.1| Ubiquitin, related [Neospora caninum Liverpool]
          Length = 535

 Score =  157 bits (398), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LDVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I L+V   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  157 bits (398), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LDVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I L+V   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  157 bits (398), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LDVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I L+V   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 403 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449



 Score =  157 bits (398), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LDVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP 
Sbjct: 360 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I L+V   DT
Sbjct: 419 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDT 478

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 479 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 525



 Score =  129 bits (323), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 82/223 (36%), Positives = 130/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I L+V   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 73/218 (33%), Positives = 121/218 (55%), Gaps = 8/218 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 319 LDVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 377 LRGGMQIFVKTLTG-KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 435

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP 
Sbjct: 436 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQD-KEGIPP 494

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  
Sbjct: 495 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 532


>gi|307108562|gb|EFN56802.1| hypothetical protein CHLNCDRAFT_51574 [Chlorella variabilis]
          Length = 979

 Score =  157 bits (398), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 101/261 (38%), Positives = 151/261 (57%), Gaps = 8/261 (3%)

Query: 27  DLPELFYAGQQLENGLTVIDYGIPNNSVIH---NDSGVMKLYFKTPSNEKTFELKANRSD 83
           D   L +AG+QLE+G T+ DY I   S +H      G M+++ KT +  KT  L+   SD
Sbjct: 713 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG-KTITLEVESSD 771

Query: 84  TIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEIFV 143
           TIEN+K  I+ +EGIP  +  + + GK +E   TL   NI  E TL ++   +   +IFV
Sbjct: 772 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFV 831

Query: 144 QTPT-STVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKEN 202
           +T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TLA Y+I++ 
Sbjct: 832 KTLTGKTITLEVESSDTIENVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKE 890

Query: 203 EVLQIIRHVK--HSIFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQ 260
             L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+F  +
Sbjct: 891 STLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGK 950

Query: 261 QLEDDRNLASYKIVNESIVNL 281
           QLED R LA Y I  ES ++L
Sbjct: 951 QLEDGRTLADYNIQKESTLHL 971



 Score =  133 bits (335), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 83/212 (39%), Positives = 124/212 (58%), Gaps = 4/212 (1%)

Query: 73  KTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMI 132
           KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   NI  E TL ++
Sbjct: 81  KTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 140

Query: 133 SVPKELQEIFVQTPT-STVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNL 191
              +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ 
Sbjct: 141 LRLRGGMQIFVKTLTGKTITLEVESSDTIENVKAKIQD-KEGIPPDQQRLIFAGKQLEDG 199

Query: 192 KTLAYYDIKENEVLQIIRHVK--HSIFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQA 249
           +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  
Sbjct: 200 RTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIP 259

Query: 250 PDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 260 PDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 291



 Score =  119 bits (299), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 86/254 (33%), Positives = 131/254 (51%), Gaps = 36/254 (14%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVRE------------------------- 96
           M+++ KT +  KT  L+   SDTIEN+K  I+ +E                         
Sbjct: 644 MQIFVKTLTG-KTITLEVESSDTIENVKAKIQDKEDQTCLPVRIKLVWSLCRWYVLSTLP 702

Query: 97  ------GIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEIFVQTPT-ST 149
                 GIP  +  + + GK +E   TL   NI  E TL ++   +   +IFV+T T  T
Sbjct: 703 NPAAAAGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 762

Query: 150 VKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIR 209
           + LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TLA Y+I++   L ++ 
Sbjct: 763 ITLEVESSDTIENVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 821

Query: 210 HVK--HSIFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRN 267
            ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+F  +QLED R 
Sbjct: 822 RLRGGMQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 881

Query: 268 LASYKIVNESIVNL 281
           LA Y I  ES ++L
Sbjct: 882 LADYNIQKESTLHL 895



 Score =  112 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 75/216 (34%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 765 LEVESSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 822

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 823 LRGGMQIFVKTLTG-KTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 881

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPT-STVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 882 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKAKIQD-KEGIPP 940

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TLA Y+I++   L ++  ++
Sbjct: 941 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 976



 Score =  111 bits (278), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 76/214 (35%), Positives = 121/214 (56%), Gaps = 8/214 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 85  LEVESSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 142

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 143 LRGGMQIFVKTLTG-KTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 201

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPT-STVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 202 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKAKIQD-KEGIPP 260

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRH 210
           +   L   G+QL++ +TLA Y+I++   L +  H
Sbjct: 261 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLDLH 294



 Score = 57.0 bits (136), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/64 (46%), Positives = 40/64 (62%)

Query: 218 KLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNES 277
           K + G+ I LEV   DT+ +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES
Sbjct: 76  KGVGGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKES 135

Query: 278 IVNL 281
            ++L
Sbjct: 136 TLHL 139


>gi|237842873|ref|XP_002370734.1| polyubiquitin, putative [Toxoplasma gondii ME49]
 gi|211968398|gb|EEB03594.1| polyubiquitin, putative [Toxoplasma gondii ME49]
 gi|221485709|gb|EEE23990.1| polyubiquitin, putative [Toxoplasma gondii GT1]
 gi|221502923|gb|EEE28633.1| polyubiquitin, putative [Toxoplasma gondii VEG]
          Length = 307

 Score =  157 bits (398), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LDVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I L+V   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  129 bits (323), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 82/223 (36%), Positives = 130/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I L+V   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 73/218 (33%), Positives = 121/218 (55%), Gaps = 8/218 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LDVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 304


>gi|92790164|emb|CAI83751.1| Polyubiqutin 1 [Entodinium caudatum]
          Length = 297

 Score =  157 bits (398), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ IE +K +I  K  E I  D   L +AG+QLE+  T+ DY I   S +H    
Sbjct: 7   LDVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLR 64

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 65  LRGGMQIFVKTLTG-KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRT 123

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP 
Sbjct: 124 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQD-KEGIPP 182

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I L+V   DT
Sbjct: 183 DQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDT 242

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED+R LA Y I  ES ++L
Sbjct: 243 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHL 289



 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 81/212 (38%), Positives = 124/212 (58%), Gaps = 4/212 (1%)

Query: 73  KTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMI 132
           KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   NI  E TL ++
Sbjct: 3   KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLV 62

Query: 133 SVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNL 191
              +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP +   L   G+QL++ 
Sbjct: 63  LRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQD-KEGIPPDQQRLIFAGKQLEDN 121

Query: 192 KTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQA 249
           +TLA Y+I++   L ++  ++    IFVK L G+ I L+V   DT+ +VK K+  + G  
Sbjct: 122 RTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIP 181

Query: 250 PDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           PD QRL+F  +QLED+R LA Y I  ES ++L
Sbjct: 182 PDQQRLIFAGKQLEDNRTLADYNIQKESTLHL 213



 Score =  103 bits (257), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 73/216 (33%), Positives = 120/216 (55%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ IE +K +I  K  E I  D   L +AG+QLE+  T+ DY I   S +H    
Sbjct: 83  LDVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLR 140

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 141 LRGGMQIFVKTLTG-KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRT 199

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP 
Sbjct: 200 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQD-KEGIPP 258

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TLA Y+I++   L ++  ++
Sbjct: 259 DQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLRLR 294



 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 28/60 (46%), Positives = 39/60 (65%)

Query: 222 GRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           G+ I L+V   DT+ +VK K+  + G  PD QRL+F  +QLED+R LA Y I  ES ++L
Sbjct: 2   GKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHL 61


>gi|339896986|ref|XP_001463552.2| polyubiquitin [Leishmania infantum JPCM5]
 gi|321399001|emb|CAM65917.2| polyubiquitin [Leishmania infantum JPCM5]
          Length = 866

 Score =  157 bits (398), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE G T+ DY I   S +H    
Sbjct: 69  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLR 126

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 127 LRGGMQIFVKTLTG-KTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRT 185

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 186 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDTIENVKAKIQD-KEGIPP 244

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL+  +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 245 DQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDT 304

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLE+ R L+ Y I  ES ++L
Sbjct: 305 IENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHL 351



 Score =  157 bits (398), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE G T+ DY I   S +H    
Sbjct: 145 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLR 202

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 203 LRGGMQIFVKTLTG-KTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRT 261

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 262 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDTIENVKAKIQD-KEGIPP 320

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL+  +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 321 DQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDT 380

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLE+ R L+ Y I  ES ++L
Sbjct: 381 IENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHL 427



 Score =  157 bits (398), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE G T+ DY I   S +H    
Sbjct: 221 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLR 278

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 279 LRGGMQIFVKTLTG-KTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRT 337

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 338 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDTIENVKAKIQD-KEGIPP 396

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL+  +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 397 DQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDT 456

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLE+ R L+ Y I  ES ++L
Sbjct: 457 IENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHL 503



 Score =  157 bits (398), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE G T+ DY I   S +H    
Sbjct: 297 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLR 354

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 355 LRGGMQIFVKTLTG-KTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRT 413

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 414 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDTIENVKAKIQD-KEGIPP 472

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL+  +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 473 DQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDT 532

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLE+ R L+ Y I  ES ++L
Sbjct: 533 IENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHL 579



 Score =  157 bits (398), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE G T+ DY I   S +H    
Sbjct: 373 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLR 430

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 431 LRGGMQIFVKTLTG-KTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRT 489

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 490 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDTIENVKAKIQD-KEGIPP 548

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL+  +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 549 DQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDT 608

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLE+ R L+ Y I  ES ++L
Sbjct: 609 IENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHL 655



 Score =  157 bits (398), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE G T+ DY I   S +H    
Sbjct: 449 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLR 506

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 507 LRGGMQIFVKTLTG-KTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRT 565

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 566 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDTIENVKAKIQD-KEGIPP 624

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL+  +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 625 DQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDT 684

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLE+ R L+ Y I  ES ++L
Sbjct: 685 IENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHL 731



 Score =  157 bits (398), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE G T+ DY I   S +H    
Sbjct: 525 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLR 582

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 583 LRGGMQIFVKTLTG-KTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRT 641

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 642 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDTIENVKAKIQD-KEGIPP 700

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL+  +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 701 DQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDT 760

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLE+ R L+ Y I  ES ++L
Sbjct: 761 IENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHL 807



 Score =  152 bits (384), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 100/267 (37%), Positives = 152/267 (56%), Gaps = 8/267 (2%)

Query: 21  EEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---NDSGVMKLYFKTPSNEKTFEL 77
           +E I  D   L +AG+QLE G T+ DY I   S +H      G M+++ KT +  KT  L
Sbjct: 11  KEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG-KTIAL 69

Query: 78  KANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMISVPKE 137
           +   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   NI  E TL ++   + 
Sbjct: 70  EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRG 129

Query: 138 LQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAY 196
             +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL+  +TL+ 
Sbjct: 130 GMQIFVKTLTGKTIALEVEPSDTIENVKAKIQD-KEGIPPDQQRLIFAGKQLEEGRTLSD 188

Query: 197 YDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQR 254
           Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QR
Sbjct: 189 YNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQR 248

Query: 255 LVFKRQQLEDDRNLASYKIVNESIVNL 281
           L+F  +QLE+ R L+ Y I  ES ++L
Sbjct: 249 LIFAGKQLEEGRTLSDYNIQKESTLHL 275



 Score =  107 bits (267), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 74/220 (33%), Positives = 122/220 (55%), Gaps = 8/220 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE G T+ DY I   S +H    
Sbjct: 601 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLR 658

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 659 LRGGMQIFVKTLTG-KTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRT 717

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 718 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEPSDTIENVKAKIQD-KEGIPP 776

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSIF 216
           +   L   G+QL+  +TL+ Y+I++   L ++  ++  + 
Sbjct: 777 DQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGGVM 816


>gi|92790160|emb|CAI83749.1| Polyubiqutin 3 [Isotricha prostoma]
          Length = 374

 Score =  157 bits (398), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ IE +K +I  K  E I  D   L +AG+QLE+  T+ DY I   S +H    
Sbjct: 8   LDVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLR 65

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 66  LRGGMQIFVKTLTG-KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRT 124

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP 
Sbjct: 125 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQD-KEGIPP 183

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I L+V   DT
Sbjct: 184 DQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDT 243

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED+R LA Y I  ES ++L
Sbjct: 244 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHL 290



 Score =  157 bits (398), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ IE +K +I  K  E I  D   L +AG+QLE+  T+ DY I   S +H    
Sbjct: 84  LDVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLR 141

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 142 LRGGMQIFVKTLTG-KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRT 200

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP 
Sbjct: 201 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQD-KEGIPP 259

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I L+V   DT
Sbjct: 260 DQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDT 319

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED+R LA Y I  ES ++L
Sbjct: 320 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHL 366



 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 81/212 (38%), Positives = 124/212 (58%), Gaps = 4/212 (1%)

Query: 73  KTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMI 132
           KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   NI  E TL ++
Sbjct: 4   KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLV 63

Query: 133 SVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNL 191
              +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP +   L   G+QL++ 
Sbjct: 64  LRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQD-KEGIPPDQQRLIFAGKQLEDN 122

Query: 192 KTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQA 249
           +TLA Y+I++   L ++  ++    IFVK L G+ I L+V   DT+ +VK K+  + G  
Sbjct: 123 RTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIP 182

Query: 250 PDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           PD QRL+F  +QLED+R LA Y I  ES ++L
Sbjct: 183 PDQQRLIFAGKQLEDNRTLADYNIQKESTLHL 214



 Score =  103 bits (257), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 73/216 (33%), Positives = 120/216 (55%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ IE +K +I  K  E I  D   L +AG+QLE+  T+ DY I   S +H    
Sbjct: 160 LDVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLR 217

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 218 LRGGMQIFVKTLTG-KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRT 276

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP 
Sbjct: 277 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQD-KEGIPP 335

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TLA Y+I++   L ++  ++
Sbjct: 336 DQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLRLR 371



 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 29/62 (46%), Positives = 40/62 (64%)

Query: 220 LNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIV 279
           L G+ I L+V   DT+ +VK K+  + G  PD QRL+F  +QLED+R LA Y I  ES +
Sbjct: 1   LTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTL 60

Query: 280 NL 281
           +L
Sbjct: 61  HL 62


>gi|92790172|emb|CAI83755.1| Polyubiqutin 2 [Polyplastron multivesiculatum]
          Length = 346

 Score =  157 bits (398), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+  T+ DY I   S +H    
Sbjct: 56  LEVEPSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLR 113

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 114 LRGGMQIFVKTLTG-KTITLEVEPSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDNRT 172

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 173 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIDNVKAKIQD-KEGIPP 231

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 232 DQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 291

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED+R LA Y I  ES ++L
Sbjct: 292 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHL 338



 Score =  152 bits (383), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 100/264 (37%), Positives = 152/264 (57%), Gaps = 8/264 (3%)

Query: 24  ILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---NDSGVMKLYFKTPSNEKTFELKAN 80
           I  D   L +AG+QLE+  T+ DY I   S +H      G M+++ KT +  KT  L+  
Sbjct: 1   IPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG-KTITLEVE 59

Query: 81  RSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMISVPKELQE 140
            SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   NI  E TL ++   +   +
Sbjct: 60  PSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLRLRGGMQ 119

Query: 141 IFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDI 199
           IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TLA Y+I
Sbjct: 120 IFVKTLTGKTITLEVEPSDTIDNVKAKIQD-KEGIPPDQQRLIFAGKQLEDNRTLADYNI 178

Query: 200 KENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVF 257
           ++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+F
Sbjct: 179 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIDNVKAKIQDKEGIPPDQQRLIF 238

Query: 258 KRQQLEDDRNLASYKIVNESIVNL 281
             +QLED+R LA Y I  ES ++L
Sbjct: 239 AGKQLEDNRTLADYNIQKESTLHL 262



 Score =  103 bits (256), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 72/216 (33%), Positives = 122/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+  T+ DY I   S +H    
Sbjct: 132 LEVEPSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLR 189

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 190 LRGGMQIFVKTLTG-KTITLEVEPSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDNRT 248

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 249 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIDNVKAKIQD-KEGIPP 307

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TLA Y+I++   L ++  ++
Sbjct: 308 DQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLRLR 343


>gi|124805744|ref|XP_001350526.1| polyubiquitin [Plasmodium falciparum 3D7]
 gi|6138833|emb|CAB59728.1| Polyubiquitin [Plasmodium falciparum 3D7]
 gi|23496650|gb|AAN36206.1| polyubiquitin [Plasmodium falciparum 3D7]
          Length = 381

 Score =  157 bits (398), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LDVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I L+V   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  157 bits (398), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LDVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I L+V   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  129 bits (323), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 82/223 (36%), Positives = 130/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I L+V   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 73/218 (33%), Positives = 121/218 (55%), Gaps = 8/218 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LDVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 380


>gi|403330856|gb|EJY64339.1| Putative ubiquitin C variant 2 [Oxytricha trifallax]
          Length = 304

 Score =  157 bits (397), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LDVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I L+V   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  129 bits (323), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 82/223 (36%), Positives = 130/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I L+V   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 73/218 (33%), Positives = 121/218 (55%), Gaps = 8/218 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LDVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 304


>gi|390334818|ref|XP_003724023.1| PREDICTED: uncharacterized protein LOC754856 [Strongylocentrotus
           purpuratus]
          Length = 1673

 Score =  157 bits (397), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 104/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEPSDSIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SD+IEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + ++ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   D+
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDS 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  157 bits (397), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 104/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVEPSDSIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SD+IEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + ++ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   D+
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDS 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 403 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449



 Score =  157 bits (397), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 104/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVEPSDSIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SD+IEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + ++ +VK  ++  +  IP 
Sbjct: 360 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   D+
Sbjct: 419 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDS 478

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 479 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 525



 Score =  157 bits (397), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 104/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 319 LEVEPSDSIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SD+IEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 377 LRGGMQIFVKTLTG-KTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 435

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + ++ +VK  ++  +  IP 
Sbjct: 436 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKIQD-KEGIPP 494

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   D+
Sbjct: 495 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDS 554

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 555 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 601



 Score =  157 bits (397), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 104/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 395 LEVEPSDSIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 452

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SD+IEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 453 LRGGMQIFVKTLTG-KTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 511

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + ++ +VK  ++  +  IP 
Sbjct: 512 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKIQD-KEGIPP 570

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   D+
Sbjct: 571 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDS 630

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 631 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 677



 Score =  157 bits (397), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 104/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 471 LEVEPSDSIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 528

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SD+IEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 529 LRGGMQIFVKTLTG-KTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 587

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + ++ +VK  ++  +  IP 
Sbjct: 588 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKIQD-KEGIPP 646

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   D+
Sbjct: 647 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDS 706

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 707 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 753



 Score =  157 bits (397), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 104/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 547 LEVEPSDSIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 604

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SD+IEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 605 LRGGMQIFVKTLTG-KTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 663

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + ++ +VK  ++  +  IP 
Sbjct: 664 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKIQD-KEGIPP 722

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   D+
Sbjct: 723 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDS 782

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 783 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 829



 Score =  157 bits (397), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 104/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 623 LEVEPSDSIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 680

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SD+IEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 681 LRGGMQIFVKTLTG-KTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 739

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + ++ +VK  ++  +  IP 
Sbjct: 740 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKIQD-KEGIPP 798

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   D+
Sbjct: 799 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDS 858

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 859 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 905



 Score =  157 bits (397), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 104/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 699 LEVEPSDSIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 756

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SD+IEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 757 LRGGMQIFVKTLTG-KTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 815

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + ++ +VK  ++  +  IP 
Sbjct: 816 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKIQD-KEGIPP 874

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   D+
Sbjct: 875 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDS 934

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 935 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 981



 Score =  157 bits (397), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 104/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1    MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
            ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 775  LEVEPSDSIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 832

Query: 58   DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
              G M+++ KT +  KT  L+   SD+IEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 833  LRGGMQIFVKTLTG-KTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 891

Query: 118  LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
            L   NI  E TL ++   +   +IFV+T T  T+ LEV  + ++ +VK  ++  +  IP 
Sbjct: 892  LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKIQD-KEGIPP 950

Query: 177  EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
            +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   D+
Sbjct: 951  DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDS 1010

Query: 235  VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
            + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 1011 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 1057



 Score =  157 bits (397), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 104/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1    MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
            ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 851  LEVEPSDSIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 908

Query: 58   DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
              G M+++ KT +  KT  L+   SD+IEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 909  LRGGMQIFVKTLTG-KTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 967

Query: 118  LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
            L   NI  E TL ++   +   +IFV+T T  T+ LEV  + ++ +VK  ++  +  IP 
Sbjct: 968  LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKIQD-KEGIPP 1026

Query: 177  EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
            +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   D+
Sbjct: 1027 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDS 1086

Query: 235  VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
            + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 1087 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 1133



 Score =  157 bits (397), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 104/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1    MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
            ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 927  LEVEPSDSIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 984

Query: 58   DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
              G M+++ KT +  KT  L+   SD+IEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 985  LRGGMQIFVKTLTG-KTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 1043

Query: 118  LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
            L   NI  E TL ++   +   +IFV+T T  T+ LEV  + ++ +VK  ++  +  IP 
Sbjct: 1044 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKIQD-KEGIPP 1102

Query: 177  EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
            +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   D+
Sbjct: 1103 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDS 1162

Query: 235  VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
            + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 1163 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 1209



 Score =  157 bits (397), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 104/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1    MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
            ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 1003 LEVEPSDSIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 1060

Query: 58   DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
              G M+++ KT +  KT  L+   SD+IEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 1061 LRGGMQIFVKTLTG-KTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 1119

Query: 118  LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
            L   NI  E TL ++   +   +IFV+T T  T+ LEV  + ++ +VK  ++  +  IP 
Sbjct: 1120 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKIQD-KEGIPP 1178

Query: 177  EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
            +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   D+
Sbjct: 1179 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDS 1238

Query: 235  VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
            + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 1239 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 1285



 Score =  157 bits (397), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 104/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1    MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
            ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 1079 LEVEPSDSIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 1136

Query: 58   DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
              G M+++ KT +  KT  L+   SD+IEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 1137 LRGGMQIFVKTLTG-KTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 1195

Query: 118  LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
            L   NI  E TL ++   +   +IFV+T T  T+ LEV  + ++ +VK  ++  +  IP 
Sbjct: 1196 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKIQD-KEGIPP 1254

Query: 177  EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
            +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   D+
Sbjct: 1255 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDS 1314

Query: 235  VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
            + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 1315 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 1361



 Score =  157 bits (397), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 104/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1    MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
            ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 1155 LEVEPSDSIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 1212

Query: 58   DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
              G M+++ KT +  KT  L+   SD+IEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 1213 LRGGMQIFVKTLTG-KTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 1271

Query: 118  LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
            L   NI  E TL ++   +   +IFV+T T  T+ LEV  + ++ +VK  ++  +  IP 
Sbjct: 1272 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKIQD-KEGIPP 1330

Query: 177  EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
            +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   D+
Sbjct: 1331 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDS 1390

Query: 235  VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
            + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 1391 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 1437



 Score =  157 bits (397), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 104/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1    MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
            ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 1231 LEVEPSDSIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 1288

Query: 58   DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
              G M+++ KT +  KT  L+   SD+IEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 1289 LRGGMQIFVKTLTG-KTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 1347

Query: 118  LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
            L   NI  E TL ++   +   +IFV+T T  T+ LEV  + ++ +VK  ++  +  IP 
Sbjct: 1348 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKIQD-KEGIPP 1406

Query: 177  EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
            +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   D+
Sbjct: 1407 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDS 1466

Query: 235  VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
            + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 1467 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 1513



 Score =  157 bits (397), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 104/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1    MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
            ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 1307 LEVEPSDSIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 1364

Query: 58   DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
              G M+++ KT +  KT  L+   SD+IEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 1365 LRGGMQIFVKTLTG-KTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 1423

Query: 118  LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
            L   NI  E TL ++   +   +IFV+T T  T+ LEV  + ++ +VK  ++  +  IP 
Sbjct: 1424 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKIQD-KEGIPP 1482

Query: 177  EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
            +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   D+
Sbjct: 1483 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDS 1542

Query: 235  VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
            + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 1543 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 1589



 Score =  157 bits (397), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 104/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1    MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
            ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 1383 LEVEPSDSIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 1440

Query: 58   DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
              G M+++ KT +  KT  L+   SD+IEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 1441 LRGGMQIFVKTLTG-KTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 1499

Query: 118  LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
            L   NI  E TL ++   +   +IFV+T T  T+ LEV  + ++ +VK  ++  +  IP 
Sbjct: 1500 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKIQD-KEGIPP 1558

Query: 177  EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
            +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   D+
Sbjct: 1559 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDS 1618

Query: 235  VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
            + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 1619 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 1665



 Score =  148 bits (374), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 101/287 (35%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVI---HN 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I         ++
Sbjct: 15  LEVEPSDSIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKXQTFLFFYS 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
               M+++ KT +  KT  L+   SD+IEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LQVNMQIFVKTLTG-KTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + ++ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   D+
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDS 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  120 bits (301), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 79/223 (35%), Positives = 127/223 (56%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SD+IEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI    T       +   +IFV+T T  T+ LEV  + ++ +VK  ++  +  IP +   
Sbjct: 60  NIQKXQTFLFFYSLQVNMQIFVKTLTGKTITLEVEPSDSIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   D++ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  105 bits (262), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 72/216 (33%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1    MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
            ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 1459 LEVEPSDSIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 1516

Query: 58   DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
              G M+++ KT +  KT  L+   SD+IEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 1517 LRGGMQIFVKTLTG-KTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 1575

Query: 118  LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
            L   NI  E TL ++   +   +IFV+T T  T+ LEV  + ++ +VK  ++  +  IP 
Sbjct: 1576 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKIQD-KEGIPP 1634

Query: 177  EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
            +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 1635 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 1670


>gi|28436479|gb|AAO43306.1| putative polyubiquitin [Arabidopsis thaliana]
          Length = 325

 Score =  157 bits (397), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 166/287 (57%), Gaps = 11/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 35  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 92

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 93  LRGGMQIFLKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 151

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  ++T+ +VK  ++  +  IP 
Sbjct: 152 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSNTIDNVKAKIQD-KEWIPP 210

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV    T
Sbjct: 211 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSGT 270

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F + QLED R LA Y I  ES ++L
Sbjct: 271 IDNVKAKIQDKEGIPPDQQRLIFGK-QLEDGRTLADYNIQKESTLHL 316



 Score =  135 bits (340), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 89/242 (36%), Positives = 138/242 (57%), Gaps = 8/242 (3%)

Query: 46  DYGIPNNSVIH---NDSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHE 102
           DY I   S +H      G M+++FKT +  KT  L+   SDTI+N+K  I+ +EGIP  +
Sbjct: 2   DYNIQKESTLHLVLRLRGGMQIFFKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQ 60

Query: 103 YDIYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVL 161
             + + GK +E   TL   NI  E TL ++   +   +IF++T T  T+ LEV  + T+ 
Sbjct: 61  QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFLKTLTGKTITLEVESSDTID 120

Query: 162 DVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKL 219
           +VK  ++  +  IP +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK 
Sbjct: 121 NVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKT 179

Query: 220 LNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIV 279
           L G+ I LEV   +T+ +VK K+  +    PD QRL+F  +QLED R LA Y I  ES +
Sbjct: 180 LTGKTITLEVESSNTIDNVKAKIQDKEWIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL 239

Query: 280 NL 281
           +L
Sbjct: 240 HL 241



 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 71/220 (32%), Positives = 122/220 (55%), Gaps = 9/220 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 111 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 168

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   S+TI+N+K  I+ +E IP  +  + + GK +E   T
Sbjct: 169 LRGGMQIFVKTLTG-KTITLEVESSNTIDNVKAKIQDKEWIPPDQQRLIFAGKQLEDGRT 227

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++      P 
Sbjct: 228 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSGTIDNVKAKIQDKEGIPPD 287

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSIF 216
           +   +F  G+QL++ +TLA Y+I++   L ++  ++   F
Sbjct: 288 QQRLIF--GKQLEDGRTLADYNIQKESTLHLVLRLRGGSF 325


>gi|92790146|emb|CAI83742.1| Polyubiquitin 2 [Dasytricha ruminantium]
          Length = 354

 Score =  157 bits (397), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ IE +K +I  K  E I  D   L +AG+QLE+  T+ DY I   S +H    
Sbjct: 64  LDVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLR 121

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 122 LRGGMQIFVKTLTG-KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRT 180

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP 
Sbjct: 181 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQD-KEGIPP 239

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I L+V   DT
Sbjct: 240 DQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDT 299

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED+R LA Y I  ES ++L
Sbjct: 300 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHL 346



 Score =  152 bits (384), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 102/272 (37%), Positives = 156/272 (57%), Gaps = 10/272 (3%)

Query: 18  AKVE--EEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---NDSGVMKLYFKTPSNE 72
           AK++  E I  D   L +AG+QLE+  T+ DY I   S +H      G M+++ KT +  
Sbjct: 1   AKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG- 59

Query: 73  KTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMI 132
           KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   NI  E TL ++
Sbjct: 60  KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLV 119

Query: 133 SVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNL 191
              +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP +   L   G+QL++ 
Sbjct: 120 LRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQD-KEGIPPDQQRLIFAGKQLEDN 178

Query: 192 KTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQA 249
           +TLA Y+I++   L ++  ++    IFVK L G+ I L+V   DT+ +VK K+  + G  
Sbjct: 179 RTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIP 238

Query: 250 PDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           PD QRL+F  +QLED+R LA Y I  ES ++L
Sbjct: 239 PDQQRLIFAGKQLEDNRTLADYNIQKESTLHL 270



 Score =  103 bits (258), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 73/216 (33%), Positives = 120/216 (55%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ IE +K +I  K  E I  D   L +AG+QLE+  T+ DY I   S +H    
Sbjct: 140 LDVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLR 197

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 198 LRGGMQIFVKTLTG-KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRT 256

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP 
Sbjct: 257 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQD-KEGIPP 315

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TLA Y+I++   L ++  ++
Sbjct: 316 DQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLRLR 351


>gi|92790170|emb|CAI83754.1| Polyubiqutin 1 [Polyplastron multivesiculatum]
          Length = 379

 Score =  157 bits (397), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+  T+ DY I   S +H    
Sbjct: 13  LEVEPSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLR 70

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 71  LRGGMQIFVKTLTG-KTITLEVEPSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDNRT 129

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 130 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIDNVKAKIQD-KEGIPP 188

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 189 DQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 248

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED+R LA Y I  ES ++L
Sbjct: 249 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHL 295



 Score =  157 bits (397), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+  T+ DY I   S +H    
Sbjct: 89  LEVEPSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLR 146

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 147 LRGGMQIFVKTLTG-KTITLEVEPSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDNRT 205

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 206 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIDNVKAKIQD-KEGIPP 264

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 265 DQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 324

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED+R LA Y I  ES ++L
Sbjct: 325 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHL 371



 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 84/221 (38%), Positives = 130/221 (58%), Gaps = 5/221 (2%)

Query: 64  LYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNI 123
           ++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   NI
Sbjct: 1   IFVKTLTG-KTITLEVEPSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNI 59

Query: 124 NNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELF 182
             E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L 
Sbjct: 60  QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIDNVKAKIQD-KEGIPPDQQRLI 118

Query: 183 RGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKD 240
             G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK 
Sbjct: 119 FAGKQLEDNRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIDNVKA 178

Query: 241 KLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K+  + G  PD QRL+F  +QLED+R LA Y I  ES ++L
Sbjct: 179 KIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHL 219



 Score =  102 bits (255), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 72/216 (33%), Positives = 122/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+  T+ DY I   S +H    
Sbjct: 165 LEVEPSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLR 222

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 223 LRGGMQIFVKTLTG-KTITLEVEPSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDNRT 281

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 282 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIDNVKAKIQD-KEGIPP 340

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TLA Y+I++   L ++  ++
Sbjct: 341 DQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLRLR 376


>gi|118370594|ref|XP_001018498.1| Ubiquitin family protein [Tetrahymena thermophila]
 gi|89300265|gb|EAR98253.1| Ubiquitin family protein [Tetrahymena thermophila SB210]
          Length = 304

 Score =  157 bits (397), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 104/287 (36%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LDVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I L+V   D+
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDS 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  130 bits (326), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 82/223 (36%), Positives = 130/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I L+V   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 72/216 (33%), Positives = 121/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LDVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ L+V  + ++ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDSIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 302


>gi|12851404|dbj|BAB29028.1| unnamed protein product [Mus musculus]
          Length = 305

 Score =  157 bits (397), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY     S +H    
Sbjct: 15  LEVEPSDTIENVKAKIRDK--EGIPPDQQRLIFAGKQLEDGSTLSDYNNQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLGVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  126 bits (316), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 82/223 (36%), Positives = 128/223 (57%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I  +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIRDKEGIPPDQQRLIFAGKQLEDGSTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           N   E TL ++   +   +IFV+T T  T+ L V  + T+ +VK  ++  +  IP +   
Sbjct: 60  NNQKESTLHLVLRLRGGMQIFVKTLTGKTITLGVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  107 bits (266), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 74/218 (33%), Positives = 122/218 (55%), Gaps = 8/218 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LGVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 304


>gi|92790152|emb|CAI83745.1| Polyubiqutin 1 [Isotricha intestinalis]
          Length = 301

 Score =  157 bits (397), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ IE +K +I  K  E I  D   L +AG+QLE+  T+ DY I   S +H    
Sbjct: 11  LDVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLR 68

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 69  LRGGMQIFVKTLTG-KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRT 127

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP 
Sbjct: 128 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQD-KEGIPP 186

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I L+V   DT
Sbjct: 187 DQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDT 246

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED+R LA Y I  ES ++L
Sbjct: 247 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHL 293



 Score =  128 bits (322), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 81/212 (38%), Positives = 124/212 (58%), Gaps = 4/212 (1%)

Query: 73  KTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMI 132
           KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   NI  E TL ++
Sbjct: 7   KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLV 66

Query: 133 SVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNL 191
              +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP +   L   G+QL++ 
Sbjct: 67  LRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQD-KEGIPPDQQRLIFAGKQLEDN 125

Query: 192 KTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQA 249
           +TLA Y+I++   L ++  ++    IFVK L G+ I L+V   DT+ +VK K+  + G  
Sbjct: 126 RTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIP 185

Query: 250 PDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           PD QRL+F  +QLED+R LA Y I  ES ++L
Sbjct: 186 PDQQRLIFAGKQLEDNRTLADYNIQKESTLHL 217



 Score =  103 bits (257), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 73/216 (33%), Positives = 120/216 (55%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ IE +K +I  K  E I  D   L +AG+QLE+  T+ DY I   S +H    
Sbjct: 87  LDVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLR 144

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 145 LRGGMQIFVKTLTG-KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRT 203

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP 
Sbjct: 204 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQD-KEGIPP 262

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TLA Y+I++   L ++  ++
Sbjct: 263 DQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLRLR 298



 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/65 (47%), Positives = 42/65 (64%)

Query: 217 VKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNE 276
           VK L G+ I L+V   DT+ +VK K+  + G  PD QRL+F  +QLED+R LA Y I  E
Sbjct: 1   VKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKE 60

Query: 277 SIVNL 281
           S ++L
Sbjct: 61  STLHL 65


>gi|92790156|emb|CAI83747.1| Polyubiqutin 1 [Isotricha prostoma]
          Length = 366

 Score =  157 bits (397), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ IE +K +I  K  E I  D   L +AG+QLE+  T+ DY I   S +H    
Sbjct: 76  LDVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLR 133

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 134 LRGGMQIFVKTLTG-KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRT 192

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP 
Sbjct: 193 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQD-KEGIPP 251

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I L+V   DT
Sbjct: 252 DQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDT 311

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED+R LA Y I  ES ++L
Sbjct: 312 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHL 358



 Score =  157 bits (396), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 106/285 (37%), Positives = 163/285 (57%), Gaps = 10/285 (3%)

Query: 3   VKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---NDS 59
           V+ ++ IE +K +I  K  E I  D   L +AG+QLE+  T+ DY I   S +H      
Sbjct: 2   VEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLRLR 59

Query: 60  GVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLD 119
           G M+++ KT +  KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E   TL 
Sbjct: 60  GGMQIFVKTLTG-KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLA 118

Query: 120 VLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSED 178
             NI  E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP + 
Sbjct: 119 DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQD-KEGIPPDQ 177

Query: 179 CELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVR 236
             L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I L+V   DT+ 
Sbjct: 178 QRLIFAGKQLEDNRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIE 237

Query: 237 DVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           +VK K+  + G  PD QRL+F  +QLED+R LA Y I  ES ++L
Sbjct: 238 NVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHL 282



 Score =  103 bits (257), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 73/216 (33%), Positives = 120/216 (55%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ IE +K +I  K  E I  D   L +AG+QLE+  T+ DY I   S +H    
Sbjct: 152 LDVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLR 209

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 210 LRGGMQIFVKTLTG-KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRT 268

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP 
Sbjct: 269 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQD-KEGIPP 327

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TLA Y+I++   L ++  ++
Sbjct: 328 DQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLRLR 363



 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 49/131 (37%), Positives = 79/131 (60%), Gaps = 3/131 (2%)

Query: 153 EVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +V  + T+ +VK  ++  +  IP +   L   G+QL++ +TLA Y+I++   L ++  ++
Sbjct: 1   DVEPSDTIENVKAKIQD-KEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLRLR 59

Query: 213 HS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLAS 270
               IFVK L G+ I L+V   DT+ +VK K+  + G  PD QRL+F  +QLED+R LA 
Sbjct: 60  GGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLAD 119

Query: 271 YKIVNESIVNL 281
           Y I  ES ++L
Sbjct: 120 YNIQKESTLHL 130


>gi|92790148|emb|CAI83743.1| Polyubiqutin 3 [Dasytricha ruminantium]
          Length = 363

 Score =  157 bits (397), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ IE +K +I  K  E I  D   L +AG+QLE+  T+ DY I   S +H    
Sbjct: 73  LDVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLR 130

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 131 LRGGMQIFVKTLTG-KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRT 189

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP 
Sbjct: 190 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQD-KEGIPP 248

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I L+V   DT
Sbjct: 249 DQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDT 308

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED+R LA Y I  ES ++L
Sbjct: 309 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHL 355



 Score =  155 bits (393), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 105/282 (37%), Positives = 161/282 (57%), Gaps = 10/282 (3%)

Query: 6   TEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---NDSGVM 62
           ++ IE +K +I  K  E I  D   L +AG+QLE+  T+ DY I   S +H      G M
Sbjct: 2   SDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLRLRGGM 59

Query: 63  KLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLN 122
           +++ KT +  KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   N
Sbjct: 60  QIFVKTLTG-KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYN 118

Query: 123 INNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCEL 181
           I  E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP +   L
Sbjct: 119 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQD-KEGIPPDQQRL 177

Query: 182 FRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVK 239
              G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I L+V   DT+ +VK
Sbjct: 178 IFAGKQLEDNRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVK 237

Query: 240 DKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
            K+  + G  PD QRL+F  +QLED+R LA Y I  ES ++L
Sbjct: 238 AKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHL 279



 Score =  103 bits (257), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 73/216 (33%), Positives = 120/216 (55%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ IE +K +I  K  E I  D   L +AG+QLE+  T+ DY I   S +H    
Sbjct: 149 LDVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLR 206

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 207 LRGGMQIFVKTLTG-KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRT 265

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP 
Sbjct: 266 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQD-KEGIPP 324

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TLA Y+I++   L ++  ++
Sbjct: 325 DQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLRLR 360


>gi|302393784|sp|P69315.2|UBIQP_LINUS RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
           Contains: RecName: Full=Ubiquitin-related; Flags:
           Precursor
 gi|168304|gb|AAA33401.1| ubiquitin, partial [Linum usitatissimum]
          Length = 305

 Score =  157 bits (397), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 100/261 (38%), Positives = 151/261 (57%), Gaps = 8/261 (3%)

Query: 27  DLPELFYAGQQLENGLTVIDYGIPNNSVIH---NDSGVMKLYFKTPSNEKTFELKANRSD 83
           D   L +AG+QLE+G T+ DY I   S +H      G M+++ KT +  KT  L+   SD
Sbjct: 4   DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFLKTLTG-KTITLEVESSD 62

Query: 84  TIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEIFV 143
           TI+N+K  I+ +EGIP  +  + + GK +E   TL   NI  E TL ++   +   +IFV
Sbjct: 63  TIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFV 122

Query: 144 QTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKEN 202
           +T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TLA Y+I++ 
Sbjct: 123 KTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKE 181

Query: 203 EVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQ 260
             L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+F  +
Sbjct: 182 STLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGK 241

Query: 261 QLEDDRNLASYKIVNESIVNL 281
           QLED R LA Y I  ES ++L
Sbjct: 242 QLEDGRTLADYNIQKESTLHL 262



 Score =  129 bits (323), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 88/248 (35%), Positives = 142/248 (57%), Gaps = 10/248 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 56  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 113

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 114 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 172

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 173 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 231

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 232 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 291

Query: 235 VRDVKDKL 242
           + +VK K+
Sbjct: 292 IDNVKAKI 299



 Score =  108 bits (269), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 69/187 (36%), Positives = 107/187 (57%), Gaps = 4/187 (2%)

Query: 98  IPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRR 156
           IP  +  + + GK +E   TL   NI  E TL ++   +   +IF++T T  T+ LEV  
Sbjct: 1   IPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFLKTLTGKTITLEVES 60

Query: 157 AHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS-- 214
           + T+ +VK  ++  +  IP +   L   G+QL++ +TLA Y+I++   L ++  ++    
Sbjct: 61  SDTIDNVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQ 119

Query: 215 IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIV 274
           IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+F  +QLED R LA Y I 
Sbjct: 120 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 179

Query: 275 NESIVNL 281
            ES ++L
Sbjct: 180 KESTLHL 186



 Score = 90.1 bits (222), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 61/172 (35%), Positives = 98/172 (56%), Gaps = 7/172 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 132 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 189

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 190 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 248

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVE 168
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++
Sbjct: 249 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 300



 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/101 (37%), Positives = 60/101 (59%), Gaps = 6/101 (5%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 208 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 265

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGI 98
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGI
Sbjct: 266 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGI 305


>gi|92790182|emb|CAI83760.1| Polyubiqutin 1 [Epidinium ecaudatum]
          Length = 378

 Score =  157 bits (397), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ IE +K +I  K  E I  D   L +AG+QLE+  T+ DY I   S +H    
Sbjct: 12  LDVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLR 69

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 70  LRGGMQIFVKTLTG-KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRT 128

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP 
Sbjct: 129 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQD-KEGIPP 187

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I L+V   DT
Sbjct: 188 DQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDT 247

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED+R LA Y I  ES ++L
Sbjct: 248 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHL 294



 Score =  157 bits (397), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ IE +K +I  K  E I  D   L +AG+QLE+  T+ DY I   S +H    
Sbjct: 88  LDVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLR 145

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 146 LRGGMQIFVKTLTG-KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRT 204

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP 
Sbjct: 205 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQD-KEGIPP 263

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I L+V   DT
Sbjct: 264 DQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDT 323

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED+R LA Y I  ES ++L
Sbjct: 324 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHL 370



 Score =  128 bits (321), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 81/212 (38%), Positives = 124/212 (58%), Gaps = 4/212 (1%)

Query: 73  KTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMI 132
           KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   NI  E TL ++
Sbjct: 8   KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLV 67

Query: 133 SVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNL 191
              +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP +   L   G+QL++ 
Sbjct: 68  LRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQD-KEGIPPDQQRLIFAGKQLEDN 126

Query: 192 KTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQA 249
           +TLA Y+I++   L ++  ++    IFVK L G+ I L+V   DT+ +VK K+  + G  
Sbjct: 127 RTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIP 186

Query: 250 PDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           PD QRL+F  +QLED+R LA Y I  ES ++L
Sbjct: 187 PDQQRLIFAGKQLEDNRTLADYNIQKESTLHL 218



 Score =  103 bits (257), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 73/216 (33%), Positives = 120/216 (55%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ IE +K +I  K  E I  D   L +AG+QLE+  T+ DY I   S +H    
Sbjct: 164 LDVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLR 221

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 222 LRGGMQIFVKTLTG-KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRT 280

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP 
Sbjct: 281 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQD-KEGIPP 339

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TLA Y+I++   L ++  ++
Sbjct: 340 DQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLRLR 375



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 55/143 (38%), Positives = 87/143 (60%), Gaps = 4/143 (2%)

Query: 142 FVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIK 200
           FV+T T  T+ L+V  + T+ +VK  ++  +  IP +   L   G+QL++ +TLA Y+I+
Sbjct: 1   FVKTLTGKTITLDVEPSDTIENVKAKIQD-KEGIPPDQQRLIFAGKQLEDNRTLADYNIQ 59

Query: 201 ENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFK 258
           +   L ++  ++    IFVK L G+ I L+V   DT+ +VK K+  + G  PD QRL+F 
Sbjct: 60  KESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFA 119

Query: 259 RQQLEDDRNLASYKIVNESIVNL 281
            +QLED+R LA Y I  ES ++L
Sbjct: 120 GKQLEDNRTLADYNIQKESTLHL 142


>gi|92790144|emb|CAI83741.1| Polyubiqutin 1 [Dasytricha ruminantium]
 gi|92790150|emb|CAI83744.1| Polyubiqutin 4 [Dasytricha ruminantium]
 gi|92790154|emb|CAI83746.1| Polyubiqutin 2 [Isotricha intestinalis]
 gi|92790158|emb|CAI83748.1| Polyubiqutin 2 [Isotricha prostoma]
          Length = 379

 Score =  157 bits (396), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ IE +K +I  K  E I  D   L +AG+QLE+  T+ DY I   S +H    
Sbjct: 13  LDVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLR 70

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 71  LRGGMQIFVKTLTG-KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRT 129

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP 
Sbjct: 130 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQD-KEGIPP 188

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I L+V   DT
Sbjct: 189 DQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDT 248

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED+R LA Y I  ES ++L
Sbjct: 249 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHL 295



 Score =  157 bits (396), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ IE +K +I  K  E I  D   L +AG+QLE+  T+ DY I   S +H    
Sbjct: 89  LDVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLR 146

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 147 LRGGMQIFVKTLTG-KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRT 205

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP 
Sbjct: 206 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQD-KEGIPP 264

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I L+V   DT
Sbjct: 265 DQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDT 324

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED+R LA Y I  ES ++L
Sbjct: 325 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHL 371



 Score =  128 bits (321), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 83/221 (37%), Positives = 129/221 (58%), Gaps = 5/221 (2%)

Query: 64  LYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNI 123
           ++ KT +  KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   NI
Sbjct: 1   IFVKTLTG-KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNI 59

Query: 124 NNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELF 182
             E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP +   L 
Sbjct: 60  QKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQD-KEGIPPDQQRLI 118

Query: 183 RGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKD 240
             G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I L+V   DT+ +VK 
Sbjct: 119 FAGKQLEDNRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKA 178

Query: 241 KLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K+  + G  PD QRL+F  +QLED+R LA Y I  ES ++L
Sbjct: 179 KIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHL 219



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 73/216 (33%), Positives = 120/216 (55%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ IE +K +I  K  E I  D   L +AG+QLE+  T+ DY I   S +H    
Sbjct: 165 LDVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLR 222

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 223 LRGGMQIFVKTLTG-KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRT 281

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP 
Sbjct: 282 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQD-KEGIPP 340

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TLA Y+I++   L ++  ++
Sbjct: 341 DQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLRLR 376


>gi|226473052|emb|CAX71212.1| polyubiquitin [Schistosoma japonicum]
          Length = 304

 Score =  157 bits (396), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 163/287 (56%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++   +    IFVK L G+ I LEV   D 
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLCFRGGMQIFVKTLTGKTITLEVEPSDP 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES + L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIPKESTLPL 297



 Score =  132 bits (332), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  105 bits (261), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 73/218 (33%), Positives = 121/218 (55%), Gaps = 8/218 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  +  + +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLCFRGGMQIFVKTLTGKTITLEVEPSDPIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
           +   L   G+QL++ +TL+ Y+I +   L ++  ++  
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIPKESTLPLVLRLRGG 304


>gi|320031616|gb|EFW13576.1| ubiquitin [Coccidioides posadasii str. Silveira]
          Length = 625

 Score =  157 bits (396), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 335 LEVESSDTIDNVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 392

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 393 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 451

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 452 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQD-KEGIPP 510

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 511 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 570

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 571 IDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 617



 Score =  126 bits (316), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 80/212 (37%), Positives = 124/212 (58%), Gaps = 4/212 (1%)

Query: 73  KTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMI 132
           KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   NI  E TL ++
Sbjct: 331 KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 390

Query: 133 SVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNL 191
              +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ 
Sbjct: 391 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQD-KEGIPPDQQRLIFAGKQLEDG 449

Query: 192 KTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQA 249
           +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  
Sbjct: 450 RTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIP 509

Query: 250 PDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 510 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 541



 Score =  104 bits (259), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 72/212 (33%), Positives = 121/212 (57%), Gaps = 8/212 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 411 LEVESSDTIDNVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 468

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 469 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 527

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 528 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQD-KEGIPP 586

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQII 208
           +   L   G+QL++ +TL+ Y+I++   L ++
Sbjct: 587 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 618



 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/66 (46%), Positives = 41/66 (62%)

Query: 216 FVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVN 275
            VK L G+ I LEV   DT+ +VK K+  + G  PD QRL+F  +QLED R L+ Y I  
Sbjct: 324 LVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK 383

Query: 276 ESIVNL 281
           ES ++L
Sbjct: 384 ESTLHL 389


>gi|102655942|gb|AAY33920.2| polyubiquitin [Euphorbia characias]
          Length = 381

 Score =  157 bits (396), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 163/287 (56%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +   K  E I  D   L +AG+ LE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKFQDK--EGIPPDQQRLIFAGKHLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKHLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL + +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLDHGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 251 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 297



 Score =  156 bits (394), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 104/287 (36%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+ LE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKHLEDGRTLADYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK ++   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLDHGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  P  QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 327 IDNVKAKIQDKEGIPPSQQRLIFAGKQLEDGRTLADYNIQKESTLHL 373



 Score =  125 bits (314), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 81/223 (36%), Positives = 128/223 (57%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K   + +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKFQDKEGIPPDQQRLIFAGKHLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+ L++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKHLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QL+  R LA Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLDHGRTLADYNIQKESTLHL 221



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 72/212 (33%), Positives = 121/212 (57%), Gaps = 8/212 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QL++G T+ DY I   S +H    
Sbjct: 167 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLDHGRTLADYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++      PS
Sbjct: 284 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPS 343

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQII 208
           +   +F  G+QL++ +TLA Y+I++   L ++
Sbjct: 344 QQRLIF-AGKQLEDGRTLADYNIQKESTLHLV 374


>gi|424513675|emb|CCO66297.1| polyubiquitin [Bathycoccus prasinos]
          Length = 359

 Score =  157 bits (396), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 100/261 (38%), Positives = 151/261 (57%), Gaps = 8/261 (3%)

Query: 27  DLPELFYAGQQLENGLTVIDYGIPNNSVIH---NDSGVMKLYFKTPSNEKTFELKANRSD 83
           D   L +AG+QLE+G T+ DY I   S +H      G M+++ KT +  KT  L+   SD
Sbjct: 90  DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG-KTITLEVESSD 148

Query: 84  TIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEIFV 143
           TI+N+K  I+ +EGIP  +  + + GK +E   TL   NI  E TL ++   +   +IFV
Sbjct: 149 TIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFV 208

Query: 144 QTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKEN 202
           +T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TLA Y+I++ 
Sbjct: 209 KTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKE 267

Query: 203 EVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQ 260
             L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+F  +
Sbjct: 268 STLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGK 327

Query: 261 QLEDDRNLASYKIVNESIVNL 281
           QLED R LA Y I  ES ++L
Sbjct: 328 QLEDGRTLADYNIQKESTLHL 348



 Score =  111 bits (278), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 71/188 (37%), Positives = 108/188 (57%), Gaps = 4/188 (2%)

Query: 97  GIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVR 155
           GIP  +  + + GK +E   TL   NI  E TL ++   +   +IFV+T T  T+ LEV 
Sbjct: 86  GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 145

Query: 156 RAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS- 214
            + T+ +VK  ++  +  IP +   L   G+QL++ +TLA Y+I++   L ++  ++   
Sbjct: 146 SSDTIDNVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGM 204

Query: 215 -IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKI 273
            IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+F  +QLED R LA Y I
Sbjct: 205 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 264

Query: 274 VNESIVNL 281
             ES ++L
Sbjct: 265 QKESTLHL 272



 Score =  108 bits (269), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 73/212 (34%), Positives = 121/212 (57%), Gaps = 8/212 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 142 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 199

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 200 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 258

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 259 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 317

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQII 208
           +   L   G+QL++ +TLA Y+I++   L ++
Sbjct: 318 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 349



 Score = 44.7 bits (104), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 43/118 (36%), Gaps = 51/118 (43%)

Query: 215 IFVKLLNGRYIILEVAKFDTVRDVKDK--------------------------------- 241
           IFVK L G+ I LEV   DT+ +VK K                                 
Sbjct: 3   IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGTFRVKSRRLKFCLLALLDSATTIESSL 62

Query: 242 ------------------LFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
                             L R  G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 63  ALRSKKSSERREREKESALSRARGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 120


>gi|395328003|gb|EJF60398.1| polyubiquitin [Dichomitus squalens LYAD-421 SS1]
          Length = 305

 Score =  157 bits (396), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 104/287 (36%), Positives = 165/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G  + DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRPLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  129 bits (323), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 82/223 (36%), Positives = 130/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E    L   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRPLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  107 bits (266), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 72/219 (32%), Positives = 124/219 (56%), Gaps = 8/219 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSI 215
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  +
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGL 305


>gi|28436474|gb|AAO43304.1| putative polyubiquitin [Arabidopsis thaliana]
          Length = 325

 Score =  157 bits (396), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 165/287 (57%), Gaps = 11/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 35  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 92

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 93  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 151

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 152 L-ADNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEWIPP 209

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV    T
Sbjct: 210 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSGT 269

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 270 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 316



 Score =  128 bits (321), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 89/242 (36%), Positives = 136/242 (56%), Gaps = 9/242 (3%)

Query: 46  DYGIPNNSVIH---NDSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHE 102
           DY I   S +H      G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +
Sbjct: 2   DYNIQKESTLHLVLRLRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQ 60

Query: 103 YDIYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVL 161
             + + GK +E   TL   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ 
Sbjct: 61  QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 120

Query: 162 DVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKL 219
           +VK  ++  +  IP +   L   G+QL++ +TLA  +I++   L ++  ++    IFVK 
Sbjct: 121 NVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLA-DNIQKESTLHLVLRLRGGMQIFVKT 178

Query: 220 LNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIV 279
           L G+ I LEV   DT+ +VK K+  +    PD QRL+F  +QLED R LA Y I  ES +
Sbjct: 179 LTGKTITLEVESSDTIDNVKAKIQDKEWIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL 238

Query: 280 NL 281
           +L
Sbjct: 239 HL 240



 Score = 99.4 bits (246), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 72/220 (32%), Positives = 122/220 (55%), Gaps = 9/220 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ D  I   S +H    
Sbjct: 111 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLAD-NIQKESTLHLVLR 167

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +E IP  +  + + GK +E   T
Sbjct: 168 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEWIPPDQQRLIFAGKQLEDGRT 226

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 227 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSGTIDNVKAKIQD-KEGIPP 285

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSIF 216
           +   L   G+QL++ +TLA Y+I++   L ++  ++   F
Sbjct: 286 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGSF 325



 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 38/89 (42%), Positives = 54/89 (60%), Gaps = 2/89 (2%)

Query: 195 AYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDS 252
           A Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD 
Sbjct: 1   ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 60

Query: 253 QRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 61  QRLIFAGKQLEDGRTLADYNIQKESTLHL 89


>gi|92790184|emb|CAI83761.1| Polyubiqutin 2 [Epidinium ecaudatum]
          Length = 322

 Score =  157 bits (396), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ IE +K +I  K  E I  D   L +AG+QLE+  T+ DY I   S +H    
Sbjct: 32  LDVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLR 89

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 90  LRGGMQIFVKTLTG-KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRT 148

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP 
Sbjct: 149 LADYNIQKESTLHLVLRLRGGMQIFVKTFTGKTITLDVEPSDTIENVKAKIQD-KEGIPP 207

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I L+V   DT
Sbjct: 208 DQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDT 267

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED+R LA Y I  ES ++L
Sbjct: 268 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHL 314



 Score =  131 bits (329), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 84/225 (37%), Positives = 131/225 (58%), Gaps = 5/225 (2%)

Query: 60  GVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLD 119
           G M+++ KT +  KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E   TL 
Sbjct: 16  GGMQIFVKTLTG-KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLA 74

Query: 120 VLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSED 178
             NI  E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP + 
Sbjct: 75  DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQD-KEGIPPDQ 133

Query: 179 CELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVR 236
             L   G+QL++ +TLA Y+I++   L ++  ++    IFVK   G+ I L+V   DT+ 
Sbjct: 134 QRLIFAGKQLEDNRTLADYNIQKESTLHLVLRLRGGMQIFVKTFTGKTITLDVEPSDTIE 193

Query: 237 DVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           +VK K+  + G  PD QRL+F  +QLED+R LA Y I  ES ++L
Sbjct: 194 NVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHL 238



 Score =  103 bits (256), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 73/212 (34%), Positives = 118/212 (55%), Gaps = 8/212 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ IE +K +I  K  E I  D   L +AG+QLE+  T+ DY I   S +H    
Sbjct: 108 LDVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLR 165

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 166 LRGGMQIFVKTFTG-KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRT 224

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP 
Sbjct: 225 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQD-KEGIPP 283

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQII 208
           +   L   G+QL++ +TLA Y+I++   L ++
Sbjct: 284 DQQRLIFAGKQLEDNRTLADYNIQKESTLHLV 315



 Score = 97.1 bits (240), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 61/163 (37%), Positives = 97/163 (59%), Gaps = 4/163 (2%)

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP +   
Sbjct: 1   NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQD-KEGIPPDQQR 59

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I L+V   DT+ +V
Sbjct: 60  LIFAGKQLEDNRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENV 119

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED+R LA Y I  ES ++L
Sbjct: 120 KAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHL 162


>gi|82539669|ref|XP_724205.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
 gi|23478774|gb|EAA15770.1| Unknown protein [Plasmodium yoelii yoelii]
          Length = 329

 Score =  156 bits (395), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 40  LDVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 97

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 98  LRGGMQIFVKTLTG-KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 156

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP 
Sbjct: 157 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQD-KEGIPP 215

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I L+V   DT
Sbjct: 216 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDT 275

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 276 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 322



 Score =  125 bits (314), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 79/212 (37%), Positives = 123/212 (58%), Gaps = 4/212 (1%)

Query: 73  KTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMI 132
           KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   NI  E TL ++
Sbjct: 36  KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 95

Query: 133 SVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNL 191
              +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP +   L   G+QL++ 
Sbjct: 96  LRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQD-KEGIPPDQQRLIFAGKQLEDG 154

Query: 192 KTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQA 249
           +TL+ Y+I++   L ++  ++    IFVK L G+ I L+V   DT+ +VK K+  + G  
Sbjct: 155 RTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIP 214

Query: 250 PDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 215 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 246



 Score =  104 bits (260), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 73/216 (33%), Positives = 121/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 116 LDVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 173

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 174 LRGGMQIFVKTLTG-KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 232

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP 
Sbjct: 233 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQD-KEGIPP 291

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 292 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 327



 Score = 84.3 bits (207), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 55/168 (32%), Positives = 91/168 (54%), Gaps = 20/168 (11%)

Query: 133 SVPKELQEIFVQTPTS-----------------TVKLEVRRAHTVLDVKKMVESMRICIP 175
           ++P    +IFV+T T                  T+ L+V  + T+ +VK  ++  +  IP
Sbjct: 4   TIPLPKMQIFVKTLTGKLANNILLIMYIFLIRKTITLDVEPSDTIENVKAKIQD-KEGIP 62

Query: 176 SEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFD 233
            +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I L+V   D
Sbjct: 63  PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSD 122

Query: 234 TVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           T+ +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 123 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 170


>gi|449266037|gb|EMC77164.1| Ubiquitin, partial [Columba livia]
          Length = 290

 Score =  156 bits (395), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 104/279 (37%), Positives = 161/279 (57%), Gaps = 10/279 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKI 273
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 289



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  104 bits (259), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 73/204 (35%), Positives = 117/204 (57%), Gaps = 8/204 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIK 200
           +   L   G+QL++ +TL+ Y+I+
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQ 290


>gi|281211832|gb|EFA85994.1| hypothetical protein PPL_01227 [Polysphondylium pallidum PN500]
          Length = 385

 Score =  156 bits (395), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 103/288 (35%), Positives = 165/288 (57%), Gaps = 9/288 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPE-LFYAGQQLENGLTVIDYGIPNNSVIH--- 56
           ++V+ ++ IE +K +I       +   + + L +AG+QLE+G T+ DY I   S +H   
Sbjct: 91  LEVEGSDTIENVKTKIQGYRARMVFHPINQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 150

Query: 57  NDSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYI 116
              G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   
Sbjct: 151 RLRGGMQIFVKTLTG-KTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGR 209

Query: 117 TLDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIP 175
           TL   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP
Sbjct: 210 TLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDTIENVKTKIQD-KEGIP 268

Query: 176 SEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFD 233
            +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   D
Sbjct: 269 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSD 328

Query: 234 TVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           T+ +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 329 TIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 376



 Score =  147 bits (370), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 105/290 (36%), Positives = 164/290 (56%), Gaps = 13/290 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEGSDTIENVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIE-VREGIPVHEYD--IYYGGKLIES 114
             G M+++ KT +  KT  L+   SDTIEN+K  I+  R  +  H  +  + + GK +E 
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEGSDTIENVKTKIQGYRARMVFHPINQRLIFAGKQLED 131

Query: 115 YITLDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRIC 173
             TL   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  
Sbjct: 132 GRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDTIENVKTKIQD-KEG 190

Query: 174 IPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAK 231
           IP +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV  
Sbjct: 191 IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEG 250

Query: 232 FDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
            DT+ +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 SDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 300



 Score =  129 bits (323), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 83/225 (36%), Positives = 130/225 (57%), Gaps = 6/225 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVES--MRICIPSED 178
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++    R+     +
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDTIENVKTKIQGYRARMVFHPIN 119

Query: 179 CELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVR 236
             L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ 
Sbjct: 120 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDTIE 179

Query: 237 DVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 180 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 224



 Score =  107 bits (268), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 74/212 (34%), Positives = 121/212 (57%), Gaps = 8/212 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 170 LEVEGSDTIENVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 227

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 228 LRGGMQIFVKTLTG-KTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 286

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 287 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDTIENVKTKIQD-KEGIPP 345

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQII 208
           +   L   G+QL++ +TL+ Y+I++   L ++
Sbjct: 346 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 377


>gi|42490818|gb|AAH66197.1| Ubiquitin B [Mus musculus]
          Length = 305

 Score =  156 bits (395), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 165/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LPDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV    T
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSVT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  131 bits (329), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 130/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL  Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLPDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 74/218 (33%), Positives = 123/218 (56%), Gaps = 8/218 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLPDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSVTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 304


>gi|164510214|emb|CAJ41447.1| polyubiquitin [Paralvinella grasslei]
          Length = 304

 Score =  156 bits (395), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 103/287 (35%), Positives = 166/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEASDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLGDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEASDTIDNVKAKIQDKEGIPPDQRRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  + TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKKSTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   D+
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDS 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  131 bits (329), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEASDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLGDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIDNVKAKIQD-KEGIPPDQRR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKKSTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  104 bits (260), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 71/212 (33%), Positives = 121/212 (57%), Gaps = 8/212 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEASDTIDNVKAKIQDK--EGIPPDQRRLIFAGKQLEDGRTLSDYNIQKKSTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEASDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + ++ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDSIENVKTKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQII 208
           +   L   G+QL++ +TL+ Y+I++   L ++
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298


>gi|226763|prf||1604470A poly-ubiquitin
          Length = 272

 Score =  156 bits (395), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 101/264 (38%), Positives = 152/264 (57%), Gaps = 8/264 (3%)

Query: 24  ILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---NDSGVMKLYFKTPSNEKTFELKAN 80
           I  D   L +AG+QLE+G T+ DY I   S +H      G M+++ KT +  KT  L+  
Sbjct: 3   IPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG-KTITLEVE 61

Query: 81  RSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMISVPKELQE 140
            SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   NI  E TL ++   +   +
Sbjct: 62  SSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQ 121

Query: 141 IFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDI 199
           IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TLA Y+I
Sbjct: 122 IFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLADYNI 180

Query: 200 KENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVF 257
           ++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+F
Sbjct: 181 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIF 240

Query: 258 KRQQLEDDRNLASYKIVNESIVNL 281
             +QLED R LA Y I  ES ++L
Sbjct: 241 AGKQLEDGRTLADYNIQKESTLHL 264



 Score =  111 bits (278), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 71/188 (37%), Positives = 108/188 (57%), Gaps = 4/188 (2%)

Query: 97  GIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVR 155
           GIP  +  + + GK +E   TL   NI  E TL ++   +   +IFV+T T  T+ LEV 
Sbjct: 2   GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 61

Query: 156 RAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS- 214
            + T+ +VK  ++  +  IP +   L   G+QL++ +TLA Y+I++   L ++  ++   
Sbjct: 62  SSDTIDNVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGM 120

Query: 215 -IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKI 273
            IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+F  +QLED R LA Y I
Sbjct: 121 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 180

Query: 274 VNESIVNL 281
             ES ++L
Sbjct: 181 QKESTLHL 188



 Score =  108 bits (269), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 73/218 (33%), Positives = 123/218 (56%), Gaps = 8/218 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 58  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 115

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 116 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 174

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 175 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 233

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
           +   L   G+QL++ +TLA Y+I++   L ++  ++  
Sbjct: 234 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 271


>gi|28436476|gb|AAO43305.1| putative polyubiquitin [Arabidopsis thaliana]
          Length = 325

 Score =  156 bits (394), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 165/287 (57%), Gaps = 11/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 35  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 92

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 93  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 151

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 152 L-ADNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 209

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV    T
Sbjct: 210 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSGT 269

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 270 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 316



 Score =  131 bits (329), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 90/242 (37%), Positives = 137/242 (56%), Gaps = 9/242 (3%)

Query: 46  DYGIPNNSVIH---NDSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHE 102
           DY I   S +H      G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +
Sbjct: 2   DYNIQKESTLHLVLRLRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQ 60

Query: 103 YDIYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVL 161
             + + GK +E   TL   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ 
Sbjct: 61  QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 120

Query: 162 DVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKL 219
           +VK  ++  +  IP +   L   G+QL++ +TLA  +I++   L ++  ++    IFVK 
Sbjct: 121 NVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLAD-NIQKESTLHLVLRLRGGMQIFVKT 178

Query: 220 LNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIV 279
           L G+ I LEV   DT+ +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES +
Sbjct: 179 LTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL 238

Query: 280 NL 281
           +L
Sbjct: 239 HL 240



 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 73/220 (33%), Positives = 123/220 (55%), Gaps = 9/220 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ D  I   S +H    
Sbjct: 111 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLAD-NIQKESTLHLVLR 167

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 168 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 226

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 227 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSGTIDNVKAKIQD-KEGIPP 285

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSIF 216
           +   L   G+QL++ +TLA Y+I++   L ++  ++   F
Sbjct: 286 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGSF 325



 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 38/89 (42%), Positives = 54/89 (60%), Gaps = 2/89 (2%)

Query: 195 AYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDS 252
           A Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD 
Sbjct: 1   ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 60

Query: 253 QRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 61  QRLIFAGKQLEDGRTLADYNIQKESTLHL 89


>gi|90655082|gb|ABD96088.1| polyubiquitin [Malus x domestica]
          Length = 270

 Score =  156 bits (394), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 101/264 (38%), Positives = 152/264 (57%), Gaps = 8/264 (3%)

Query: 24  ILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---NDSGVMKLYFKTPSNEKTFELKAN 80
           I  D   L +AG+QLE+G T+ DY I   S +H      G M+++ KT +  KT  L+  
Sbjct: 1   IPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG-KTITLEVE 59

Query: 81  RSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMISVPKELQE 140
            SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   NI  E TL ++   +   +
Sbjct: 60  SSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQ 119

Query: 141 IFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDI 199
           IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TLA Y+I
Sbjct: 120 IFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLADYNI 178

Query: 200 KENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVF 257
           ++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+F
Sbjct: 179 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIF 238

Query: 258 KRQQLEDDRNLASYKIVNESIVNL 281
             +QLED R LA Y I  ES ++L
Sbjct: 239 AGKQLEDGRTLADYNIQKESTLHL 262



 Score =  108 bits (269), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 73/216 (33%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 56  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 113

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 114 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 172

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 173 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 231

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TLA Y+I++   L ++  ++
Sbjct: 232 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 267


>gi|157093353|gb|ABV22331.1| ubiquitin [Noctiluca scintillans]
          Length = 302

 Score =  156 bits (394), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 103/287 (35%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LDVEASDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L    SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLDVEASDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I L+V   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYSIQKESTLHL 297



 Score =  128 bits (321), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 81/223 (36%), Positives = 130/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L    SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLDVEASDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I L+V   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  103 bits (258), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 71/216 (32%), Positives = 120/216 (55%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LDVEASDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L    SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLDVEASDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIDNVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y I++   L ++  ++
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYSIQKESTLHLVLRLR 302


>gi|157093211|gb|ABV22260.1| polyubiquitin [Karlodinium micrum]
          Length = 536

 Score =  155 bits (393), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 103/287 (35%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LDVEASDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L    SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLDVEASDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I L+V   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  155 bits (393), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 103/287 (35%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LDVEASDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L    SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLDVEASDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIDNVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I L+V   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  155 bits (393), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 103/287 (35%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LDVEASDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L    SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLDVEASDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIDNVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I L+V   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 403 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449



 Score =  155 bits (393), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 103/287 (35%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LDVEASDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L    SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLDVEASDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP 
Sbjct: 360 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIDNVKAKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I L+V   DT
Sbjct: 419 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDT 478

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 479 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 525



 Score =  128 bits (321), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 81/223 (36%), Positives = 130/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L    SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLDVEASDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I L+V   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  105 bits (261), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 71/219 (32%), Positives = 122/219 (55%), Gaps = 8/219 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 319 LDVEASDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L    SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 377 LRGGMQIFVKTLTG-KTITLDVEASDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 435

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP 
Sbjct: 436 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIDNVKAKIQD-KEGIPP 494

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSI 215
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  +
Sbjct: 495 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 533


>gi|3603456|gb|AAC35858.1| polyubiquitin [Capsicum chinense]
          Length = 265

 Score =  155 bits (393), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 99/257 (38%), Positives = 150/257 (58%), Gaps = 8/257 (3%)

Query: 31  LFYAGQQLENGLTVIDYGIPNNSVIH---NDSGVMKLYFKTPSNEKTFELKANRSDTIEN 87
           L +AG+QLE+G T+ DY I   S +H      G M+++ KT +  KT  L+   SDTI+N
Sbjct: 3   LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG-KTITLEVESSDTIDN 61

Query: 88  IKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEIFVQTPT 147
           +K  I+ +EGIP  +  + + GK +E   TL   NI  E TL ++   +   +IFV+T T
Sbjct: 62  VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLT 121

Query: 148 S-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQ 206
             T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TLA Y+I++   L 
Sbjct: 122 GKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 180

Query: 207 IIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLED 264
           ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+F  +QLED
Sbjct: 181 LVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLED 240

Query: 265 DRNLASYKIVNESIVNL 281
            R LA Y I  ES ++L
Sbjct: 241 GRTLADYNIQKESTLHL 257



 Score =  107 bits (268), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 73/216 (33%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 51  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 108

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 109 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 167

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 168 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQD-KEGIPP 226

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TLA Y+I++   L ++  ++
Sbjct: 227 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 262


>gi|444791|prf||1908225A ubiquitin
          Length = 305

 Score =  155 bits (393), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 165/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +E IP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKECIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LFDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  134 bits (338), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  + CIP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KECIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL  Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLFDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  107 bits (267), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 74/216 (34%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEPSDTIENVKAKIQDK--ECIPPDQQRLIFAGKQLEDGRTLFDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 302


>gi|255732802|ref|XP_002551324.1| ubiquitin [Candida tropicalis MYA-3404]
 gi|240131065|gb|EER30626.1| ubiquitin [Candida tropicalis MYA-3404]
          Length = 299

 Score =  155 bits (393), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 102/285 (35%), Positives = 165/285 (57%), Gaps = 10/285 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIV 279
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ++++
Sbjct: 251 IDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNISKKNLL 295



 Score =  131 bits (330), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221


>gi|28436472|gb|AAO43303.1| putative polyubiquitin [Arabidopsis thaliana]
          Length = 325

 Score =  155 bits (392), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 165/287 (57%), Gaps = 11/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 35  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 92

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 93  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 151

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 152 L-ADNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEWIPP 209

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV    T
Sbjct: 210 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKNLTGKTITLEVESSGT 269

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 270 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 316



 Score =  128 bits (321), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 89/242 (36%), Positives = 136/242 (56%), Gaps = 9/242 (3%)

Query: 46  DYGIPNNSVIH---NDSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHE 102
           DY I   S +H      G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +
Sbjct: 2   DYNIQKESTLHLVLRLRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQ 60

Query: 103 YDIYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVL 161
             + + GK +E   TL   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ 
Sbjct: 61  QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 120

Query: 162 DVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKL 219
           +VK  ++  +  IP +   L   G+QL++ +TLA  +I++   L ++  ++    IFVK 
Sbjct: 121 NVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLAD-NIQKESTLHLVLRLRGGMQIFVKT 178

Query: 220 LNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIV 279
           L G+ I LEV   DT+ +VK K+  +    PD QRL+F  +QLED R LA Y I  ES +
Sbjct: 179 LTGKTITLEVESSDTIDNVKAKIQDKEWIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL 238

Query: 280 NL 281
           +L
Sbjct: 239 HL 240



 Score = 97.1 bits (240), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 71/220 (32%), Positives = 121/220 (55%), Gaps = 9/220 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ D  I   S +H    
Sbjct: 111 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLAD-NIQKESTLHLVLR 167

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +E IP  +  + + GK +E   T
Sbjct: 168 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEWIPPDQQRLIFAGKQLEDGRT 226

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+  T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 227 LADYNIQKESTLHLVLRLRGGMQIFVKNLTGKTITLEVESSGTIDNVKAKIQD-KEGIPP 285

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSIF 216
           +   L   G+QL++ +TLA Y+I++   L ++  ++   F
Sbjct: 286 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGSF 325



 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 38/89 (42%), Positives = 54/89 (60%), Gaps = 2/89 (2%)

Query: 195 AYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDS 252
           A Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD 
Sbjct: 1   ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 60

Query: 253 QRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 61  QRLIFAGKQLEDGRTLADYNIQKESTLHL 89


>gi|66804955|ref|XP_636210.1| hypothetical protein DDB_G0289449 [Dictyostelium discoideum AX4]
 gi|302595960|sp|P0CG78.1|UBIQF_DICDI RecName: Full=Polyubiquitin-F; Contains: RecName: Full=Ubiquitin;
           Flags: Precursor
 gi|167947|gb|AAA33267.1| ubiquitin [Dictyostelium discoideum]
 gi|60464567|gb|EAL62704.1| hypothetical protein DDB_G0289449 [Dictyostelium discoideum AX4]
          Length = 533

 Score =  155 bits (392), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 104/287 (36%), Positives = 163/287 (56%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEGSDNIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SD IEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  +  + +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   D 
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDN 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  155 bits (392), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 104/287 (36%), Positives = 163/287 (56%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEGSDNIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SD IEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  +  + +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   D 
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDN 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  155 bits (392), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 104/287 (36%), Positives = 163/287 (56%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVEGSDNIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SD IEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  +  + +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   D 
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDN 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 403 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449



 Score =  155 bits (392), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 104/287 (36%), Positives = 163/287 (56%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LEVEGSDNIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SD IEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  +  + +VK  ++  +  IP 
Sbjct: 360 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   D 
Sbjct: 419 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDN 478

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 479 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 525



 Score =  126 bits (317), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 81/223 (36%), Positives = 128/223 (57%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SD IEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  +  + +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   D + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  104 bits (259), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 72/218 (33%), Positives = 121/218 (55%), Gaps = 8/218 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 319 LEVEGSDNIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SD IEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 377 LRGGMQIFVKTLTG-KTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 435

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  +  + +VK  ++  +  IP 
Sbjct: 436 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQD-KEGIPP 494

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  
Sbjct: 495 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 532


>gi|66812158|ref|XP_640258.1| hypothetical protein DDB_G0282295 [Dictyostelium discoideum AX4]
 gi|302595958|sp|P0CG76.1|UBIQA_DICDI RecName: Full=Polyubiquitin-A; Contains: RecName: Full=Ubiquitin;
           Contains: RecName: Full=Ubiquitin-related 1; Flags:
           Precursor
 gi|167937|gb|AAA33262.1| ubiquitin [Dictyostelium discoideum]
 gi|167951|gb|AAA33269.1| ubiquitin [Dictyostelium discoideum]
 gi|60468260|gb|EAL66269.1| hypothetical protein DDB_G0282295 [Dictyostelium discoideum AX4]
          Length = 381

 Score =  155 bits (392), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 104/287 (36%), Positives = 163/287 (56%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEGSDNIENVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SD IEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEGSDNIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  +  + +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   D 
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDN 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  155 bits (392), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 104/287 (36%), Positives = 163/287 (56%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEGSDNIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SD IEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEGSDNIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  +  + +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENVKTKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   D 
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDN 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  126 bits (317), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 81/223 (36%), Positives = 128/223 (57%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SD IEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  +  + +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENVKTKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   D + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  103 bits (258), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 72/218 (33%), Positives = 121/218 (55%), Gaps = 8/218 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVEGSDNIENVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SD IEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  +  + +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENVKTKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 380


>gi|66802284|ref|XP_629924.1| hypothetical protein DDB_G0291928 [Dictyostelium discoideum AX4]
 gi|66825263|ref|XP_645986.1| hypothetical protein DDB_G0269458 [Dictyostelium discoideum AX4]
 gi|302595963|sp|P0CG80.1|UBIQI_DICDI RecName: Full=Polyubiquitin-I; Contains: RecName: Full=Ubiquitin;
           Flags: Precursor
 gi|302595964|sp|P0CG88.1|UBIQJ_DICDI RecName: Full=Polyubiquitin-J; Contains: RecName: Full=Ubiquitin;
           Flags: Precursor
 gi|60463302|gb|EAL61494.1| hypothetical protein DDB_G0291928 [Dictyostelium discoideum AX4]
 gi|60474142|gb|EAL72079.1| hypothetical protein DDB_G0269458 [Dictyostelium discoideum AX4]
          Length = 305

 Score =  155 bits (392), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 104/287 (36%), Positives = 163/287 (56%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEGSDNIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SD IEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  +  + +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   D 
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDN 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  126 bits (317), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 81/223 (36%), Positives = 128/223 (57%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SD IEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  +  + +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   D + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  104 bits (259), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 72/218 (33%), Positives = 121/218 (55%), Gaps = 8/218 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEGSDNIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SD IEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  +  + +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 304


>gi|66811838|ref|XP_640098.1| hypothetical protein DDB_G0282369 [Dictyostelium discoideum AX4]
 gi|302595961|sp|P0CG79.1|UBIQG_DICDI RecName: Full=Polyubiquitin-G; Contains: RecName: Full=Ubiquitin;
           Flags: Precursor
 gi|167949|gb|AAA33268.1| ubiquitin [Dictyostelium discoideum]
 gi|60468034|gb|EAL66044.1| hypothetical protein DDB_G0282369 [Dictyostelium discoideum AX4]
          Length = 381

 Score =  155 bits (392), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 104/287 (36%), Positives = 163/287 (56%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEGSDNIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SD IEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  +  + +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   D 
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDN 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  155 bits (392), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 104/287 (36%), Positives = 163/287 (56%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEGSDNIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SD IEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  +  + +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   D 
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDN 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  126 bits (317), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 81/223 (36%), Positives = 128/223 (57%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SD IEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  +  + +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   D + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  104 bits (260), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 72/219 (32%), Positives = 122/219 (55%), Gaps = 8/219 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVEGSDNIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SD IEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  +  + +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSI 215
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  +
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGL 381


>gi|167935|gb|AAA33261.1| ubiquitin, partial [Dictyostelium discoideum]
          Length = 381

 Score =  155 bits (392), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 104/287 (36%), Positives = 163/287 (56%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEGSDNIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SD IEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEGSDNIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  +  + +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENVKTKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   D 
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDN 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  154 bits (388), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 104/287 (36%), Positives = 162/287 (56%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEGSDNIENVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SD IEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEGSDNIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  +  + +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   D 
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDN 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L  Y I  ES ++L
Sbjct: 327 IENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLFDYNIQKESTLHL 373



 Score =  126 bits (317), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 81/223 (36%), Positives = 128/223 (57%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SD IEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  +  + +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENVKTKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   D + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 72/218 (33%), Positives = 120/218 (55%), Gaps = 8/218 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVEGSDNIENVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SD IEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  +  + +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENVKTKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
           +   L   G+QL++ +TL  Y+I++   L ++  ++  
Sbjct: 343 DQQRLIFAGKQLEDGRTLFDYNIQKESTLHLVLRLRGG 380


>gi|426263332|emb|CCG34086.1| Polyubiquitin [uncultured eukaryote]
          Length = 304

 Score =  155 bits (391), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 102/287 (35%), Positives = 163/287 (56%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMRIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I   ++   
Sbjct: 251 IDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKRALCTW 297



 Score =  131 bits (329), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221


>gi|6118549|gb|AAF04147.1| ubiquitin precursor [Hevea brasiliensis]
          Length = 381

 Score =  155 bits (391), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 160/287 (55%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L    SDTI+N+K  I+ +EGIP  +    + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLGVESSDTIDNVKAKIQDKEGIPPDQQRFIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G  L+ +  LA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGSSLRMVAPLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 251 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 297



 Score =  155 bits (391), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 103/287 (35%), Positives = 161/287 (56%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ I+ +K +I  K  E I  D     +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LGVESSDTIDNVKAKIQDK--EGIPPDQQRFIFAGKQLEDGRTLADYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + G  +     
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGSSLRMVAP 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 327 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 373



 Score =  116 bits (291), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 79/223 (35%), Positives = 124/223 (55%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ L V  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLGVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
               G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 FIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F    L     LA Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGSSLRMVAPLADYNIQKESTLHL 221



 Score = 95.9 bits (237), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 69/216 (31%), Positives = 117/216 (54%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG  L     + DY I   S +H    
Sbjct: 167 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGSSLRMVAPLADYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 284 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TLA Y+I++   L ++  ++
Sbjct: 343 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 378


>gi|307006571|gb|ADN23570.1| ubiquitin [Hyalomma marginatum rufipes]
          Length = 275

 Score =  155 bits (391), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 101/267 (37%), Positives = 153/267 (57%), Gaps = 8/267 (2%)

Query: 21  EEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---NDSGVMKLYFKTPSNEKTFEL 77
           +E I  D   L +AG+QLE+G T+ DY I   S +H      G M+++ KT +  KT  L
Sbjct: 3   KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG-KTITL 61

Query: 78  KANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMISVPKE 137
           +   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   NI  E TL ++   + 
Sbjct: 62  EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRG 121

Query: 138 LQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAY 196
             +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TL+ 
Sbjct: 122 GMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSD 180

Query: 197 YDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQR 254
           Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QR
Sbjct: 181 YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 240

Query: 255 LVFKRQQLEDDRNLASYKIVNESIVNL 281
           L+F  +QLED R L  Y I  ES ++L
Sbjct: 241 LIFAGKQLEDGRTLPDYNIQKESTLHL 267



 Score =  107 bits (266), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 74/218 (33%), Positives = 122/218 (55%), Gaps = 8/218 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 61  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 118

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 119 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 177

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 178 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 236

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
           +   L   G+QL++ +TL  Y+I++   L ++  ++  
Sbjct: 237 DQQRLIFAGKQLEDGRTLPDYNIQKESTLHLVLRLRGG 274


>gi|66814762|ref|XP_641560.1| hypothetical protein DDB_G0279721 [Dictyostelium discoideum AX4]
 gi|302595962|sp|P0CG81.1|UBIQH_DICDI RecName: Full=Polyubiquitin-H; Contains: RecName: Full=Ubiquitin;
           Contains: RecName: Full=Ubiquitin-like
 gi|60469646|gb|EAL67635.1| hypothetical protein DDB_G0279721 [Dictyostelium discoideum AX4]
          Length = 381

 Score =  155 bits (391), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 104/287 (36%), Positives = 163/287 (56%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEGSDNIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SD IEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  +  + +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   D 
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDN 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  154 bits (389), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 104/287 (36%), Positives = 163/287 (56%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEGSDNIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SD IEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  +  + +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   D 
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVECSDN 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  126 bits (316), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 81/223 (36%), Positives = 128/223 (57%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SD IEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  +  + +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   D + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  103 bits (256), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 72/218 (33%), Positives = 121/218 (55%), Gaps = 8/218 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVEGSDNIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SD IEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  +  + +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVECSDNIENVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 380


>gi|340504493|gb|EGR30931.1| ubiquitin family protein, putative [Ichthyophthirius multifiliis]
          Length = 329

 Score =  155 bits (391), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 102/287 (35%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 39  LDVEASDSIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 96

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L    SD+IEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 97  LRGGMQIFVKTLTG-KTITLDVEASDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 155

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ L+V  + ++ +VK  ++  +  IP 
Sbjct: 156 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDSIENVKAKIQD-KEGIPP 214

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I L+V   D+
Sbjct: 215 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDS 274

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 275 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 321



 Score =  125 bits (315), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 79/223 (35%), Positives = 130/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L    SD+IEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 25  MQIFVKTLTG-KTITLDVEASDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 83

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ L+V  + ++ +VK  ++  +  IP +   
Sbjct: 84  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDSIENVKAKIQD-KEGIPPDQQR 142

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I L+V   D++ +V
Sbjct: 143 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDSIENV 202

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 203 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 245



 Score =  105 bits (261), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 71/219 (32%), Positives = 122/219 (55%), Gaps = 8/219 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 115 LDVEASDSIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 172

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L    SD+IEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 173 LRGGMQIFVKTLTG-KTITLDVEASDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 231

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ L+V  + ++ +VK  ++  +  IP 
Sbjct: 232 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDSIENVKAKIQD-KEGIPP 290

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSI 215
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  +
Sbjct: 291 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGL 329


>gi|219118861|ref|XP_002180197.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|219118863|ref|XP_002180198.1| ubiquitin extension protein 4 [Phaeodactylum tricornutum CCAP
           1055/1]
 gi|217408454|gb|EEC48388.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217408455|gb|EEC48389.1| ubiquitin extension protein 4 [Phaeodactylum tricornutum CCAP
           1055/1]
          Length = 381

 Score =  154 bits (390), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 103/287 (35%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LDVEPSDTIDNVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L    SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLDVEPSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDNVKTKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I L+V   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  154 bits (390), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 103/287 (35%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LDVEPSDTIDNVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L    SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLDVEPSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDNVKTKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I L+V   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  127 bits (318), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 81/223 (36%), Positives = 130/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L    SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLDVEPSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDNVKTKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I L+V   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  102 bits (255), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 71/218 (32%), Positives = 121/218 (55%), Gaps = 8/218 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LDVEPSDTIDNVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L    SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLDVEPSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDNVKTKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 380


>gi|323452163|gb|EGB08038.1| polyubiquitin [Aureococcus anophagefferens]
          Length = 305

 Score =  154 bits (389), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 103/287 (35%), Positives = 165/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LDVEPSDTIDNVKQKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L    SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK+ ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDNVKQKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I L+V   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  127 bits (319), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 81/223 (36%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L    SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK+ ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDNVKQKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I L+V   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 71/216 (32%), Positives = 122/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LDVEPSDTIDNVKQKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L    SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK+ ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDNVKQKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 302


>gi|340058|gb|AAA36787.1| ubiquitin precursor, partial [Homo sapiens]
          Length = 269

 Score =  154 bits (389), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 99/261 (37%), Positives = 151/261 (57%), Gaps = 8/261 (3%)

Query: 27  DLPELFYAGQQLENGLTVIDYGIPNNSVIH---NDSGVMKLYFKTPSNEKTFELKANRSD 83
           D   L +AG+QLE+G T+ DY I   S +H      G M+++ KT +  KT  L+   SD
Sbjct: 3   DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG-KTITLEVEPSD 61

Query: 84  TIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEIFV 143
           TIEN+K  I+ +EGIP  +  + + GK +E   TL   NI  E TL ++   +   +IFV
Sbjct: 62  TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFV 121

Query: 144 QTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKEN 202
           +T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TL+ Y+I++ 
Sbjct: 122 KTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 180

Query: 203 EVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQ 260
             L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+F  +
Sbjct: 181 STLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGK 240

Query: 261 QLEDDRNLASYKIVNESIVNL 281
           QLED R L+ Y I  ES ++L
Sbjct: 241 QLEDGRTLSDYNIQKESTLHL 261



 Score =  108 bits (270), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 74/219 (33%), Positives = 124/219 (56%), Gaps = 8/219 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 55  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 112

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 113 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 171

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 172 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 230

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSI 215
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  +
Sbjct: 231 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGV 269



 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 67/186 (36%), Positives = 106/186 (56%), Gaps = 4/186 (2%)

Query: 99  PVHEYDIYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRA 157
           P  +  + + GK +E   TL   NI  E TL ++   +   +IFV+T T  T+ LEV  +
Sbjct: 1   PPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPS 60

Query: 158 HTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--I 215
            T+ +VK  ++  +  IP +   L   G+QL++ +TL+ Y+I++   L ++  ++    I
Sbjct: 61  DTIENVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQI 119

Query: 216 FVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVN 275
           FVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+F  +QLED R L+ Y I  
Sbjct: 120 FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK 179

Query: 276 ESIVNL 281
           ES ++L
Sbjct: 180 ESTLHL 185


>gi|630479|pir||S43306 polyubiquitin 6 - Geodia cydonium
          Length = 448

 Score =  154 bits (388), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 108/283 (38%), Positives = 164/283 (57%), Gaps = 12/283 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++ +   +Q IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKE-TLHLVRLRGGMQ-IFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 188

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIR-HVKHSIFVKLLNGRYIILEVAKFDTV 235
           +   L   G+QL++ +TL+ Y+I + E L ++R      IFVK L G+ I LEV   DT+
Sbjct: 189 DQQRLIFAGKQLEDGRTLSDYNI-QKETLHLVRLRGGMQIFVKTLTGKTITLEVEASDTI 247

Query: 236 RDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESI 278
            +VK K+  + G  PD QRL+F  +QLED R L+ Y I  E++
Sbjct: 248 ENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKETL 290



 Score =  149 bits (375), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 105/281 (37%), Positives = 163/281 (58%), Gaps = 9/281 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSV-IHNDS 59
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   ++ +    
Sbjct: 165 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKETLHLVRLR 222

Query: 60  GVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLD 119
           G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL 
Sbjct: 223 GGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLS 281

Query: 120 VLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSED 178
             NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP + 
Sbjct: 282 DYNIQKE-TLHLVVRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPPDQ 339

Query: 179 CELFRGGEQLQNLKTLAYYDIKENEVLQIIR-HVKHSIFVKLLNGRYIILEVAKFDTVRD 237
             L   G+QL++ +TL+ Y+I + E L ++R      IFVK L G+ I LEV   DT+ +
Sbjct: 340 QRLIFAGKQLEDGRTLSDYNI-QKETLHLVRLRGGMQIFVKTLTGKTITLEVEASDTIEN 398

Query: 238 VKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESI 278
           VK K+  + G  PD QRL+F  +QLED R L+ Y I  E++
Sbjct: 399 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKETL 439



 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 84/219 (38%), Positives = 128/219 (58%), Gaps = 5/219 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIR-HVKHSIFVKLLNGRYIILEVAKFDTVRDVK 239
           L   G+QL++ +TL+ Y+I + E L ++R      IFVK L G+ I LEV   DT+ +VK
Sbjct: 119 LIFAGKQLEDGRTLSDYNI-QKETLHLVRLRGGMQIFVKTLTGKTITLEVEASDTIENVK 177

Query: 240 DKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESI 278
            K+  + G  PD QRL+F  +QLED R L+ Y I  E++
Sbjct: 178 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKETL 216



 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/67 (49%), Positives = 43/67 (64%)

Query: 215 IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIV 274
           IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+F  +QLED R L+ Y I 
Sbjct: 3   IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 62

Query: 275 NESIVNL 281
            ES ++L
Sbjct: 63  KESTLHL 69


>gi|3789940|gb|AAC67551.1| tetra-ubiquitin [Saccharum hybrid cultivar H32-8560]
          Length = 305

 Score =  154 bits (388), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 104/287 (36%), Positives = 160/287 (55%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +  +I  K  E I  D   L +AG+QLE+G T+ DY I   S  H    
Sbjct: 15  LEVESSDXIDXVXAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLXDYNIQKESTXHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E    ++   +   +IFV+T T  T+ LEV  + T  +VK  ++  +  IP 
Sbjct: 132 LADYNIQXESXXHLVLRXRGGMQIFVKTXTGKTITLEVESSDTXDNVKXKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++   +    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRXRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 251 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 297



 Score =  117 bits (294), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 79/223 (35%), Positives = 122/223 (54%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SD I+ +   I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDXIDXVXAKIQDKEGIPPDQQRLIFAGKQLEDGRTLXDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E T  ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTXHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I+      ++   +    IFVK   G+ I LEV   DT  +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQXESXXHLVLRXRGGMQIFVKTXTGKTITLEVESSDTXDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KXKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  107 bits (266), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 72/212 (33%), Positives = 119/212 (56%), Gaps = 8/212 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S  H    
Sbjct: 91  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQXESXXHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDT +N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 XRGGMQIFVKTXTG-KTITLEVESSDTXDNVKXKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LADYNIQKESTLHLVLRXRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQII 208
           +   L   G+QL++ +TLA Y+I++   L ++
Sbjct: 267 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298


>gi|118370588|ref|XP_001018495.1| Ubiquitin family protein [Tetrahymena thermophila]
 gi|89300262|gb|EAR98250.1| Ubiquitin family protein [Tetrahymena thermophila SB210]
          Length = 854

 Score =  154 bits (388), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 565 LDVEASDSIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 622

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 623 LRGGMQIFVKTLTG-KTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 681

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP 
Sbjct: 682 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQD-KEGIPP 740

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I L+V   DT
Sbjct: 741 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDT 800

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 801 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 847



 Score =  121 bits (304), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 78/212 (36%), Positives = 123/212 (58%), Gaps = 4/212 (1%)

Query: 73  KTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMI 132
           KT  L    SD+IEN+K  I+ +EGIP  +  + + GK +E   TL   NI  E TL ++
Sbjct: 561 KTITLDVEASDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 620

Query: 133 SVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNL 191
              +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP +   L   G+QL++ 
Sbjct: 621 LRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQD-KEGIPPDQQRLIFAGKQLEDG 679

Query: 192 KTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQA 249
           +TL+ Y+I++   L ++  ++    IFVK L G+ I L+V   DT+ +VK K+  + G  
Sbjct: 680 RTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIP 739

Query: 250 PDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 740 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 771



 Score =  102 bits (255), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 73/216 (33%), Positives = 121/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 641 LDVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 698

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 699 LRGGMQIFVKTLTG-KTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 757

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP 
Sbjct: 758 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQD-KEGIPP 816

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 817 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 852


>gi|70993888|ref|XP_751791.1| polyubiquitin UbiD/Ubi4 [Aspergillus fumigatus Af293]
 gi|66849425|gb|EAL89753.1| polyubiquitin UbiD/Ubi4, putative [Aspergillus fumigatus Af293]
 gi|159125290|gb|EDP50407.1| polyubiquitin UbiD/Ubi4, putative [Aspergillus fumigatus A1163]
          Length = 314

 Score =  154 bits (388), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 104/295 (35%), Positives = 164/295 (55%), Gaps = 17/295 (5%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPS--------NEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGG 109
             G M+++    S          KT  L+   SDTI+N+K  I+ +EGIP  +  + + G
Sbjct: 73  LRGGMQIWSPADSLITVVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAG 132

Query: 110 KLIESYITLDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVE 168
           K +E   TL   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++
Sbjct: 133 KQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQ 192

Query: 169 SMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYII 226
             +  IP +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I 
Sbjct: 193 D-KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIT 251

Query: 227 LEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           LEV   DT+ +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 252 LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 306



 Score =  123 bits (308), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 83/232 (35%), Positives = 129/232 (55%), Gaps = 14/232 (6%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQM---------ISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMR 171
           NI  E TL +         I  P +     V+T T  T+ LEV  + T+ +VK  ++  +
Sbjct: 60  NIQKESTLHLVLRLRGGMQIWSPADSLITVVKTLTGKTITLEVESSDTIDNVKSKIQD-K 118

Query: 172 ICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEV 229
             IP +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV
Sbjct: 119 EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEV 178

Query: 230 AKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
              DT+ +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 ESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 230



 Score =  105 bits (263), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 72/216 (33%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 100 LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 157

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 158 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 216

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 217 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 275

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 276 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 311


>gi|357498825|ref|XP_003619701.1| Ubiquitin-like protein [Medicago truncatula]
 gi|355494716|gb|AES75919.1| Ubiquitin-like protein [Medicago truncatula]
          Length = 290

 Score =  153 bits (387), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 104/287 (36%), Positives = 158/287 (55%), Gaps = 25/287 (8%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV R +                P 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVERGY----------------PP 175

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 176 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 235

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 236 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 282



 Score =  120 bits (300), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 81/223 (36%), Positives = 123/223 (55%), Gaps = 20/223 (8%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV         
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEV--------- 169

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
                 E G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 170 ------ERGYPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 206



 Score = 84.3 bits (207), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 66/218 (30%), Positives = 111/218 (50%), Gaps = 23/218 (10%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L               EV  G P  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITL---------------EVERGYPPDQQRLIFAGKQLEDGRT 192

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 193 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 251

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
           +   L   G+QL++ +TLA Y+I++   L ++  ++  
Sbjct: 252 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 289


>gi|71008515|ref|XP_758220.1| hypothetical protein UM02073.1 [Ustilago maydis 521]
 gi|46097838|gb|EAK83071.1| hypothetical protein UM02073.1 [Ustilago maydis 521]
          Length = 387

 Score =  153 bits (386), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 105/293 (35%), Positives = 166/293 (56%), Gaps = 16/293 (5%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEV------LQIIRHVKHS--IFVKLLNGRYIILE 228
           +   L   G+QL++ +TL+ Y+I++         L ++  ++    IFVK L G+ I LE
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTHSPCSTLHLVLRLRGGMQIFVKTLTGKTITLE 250

Query: 229 VAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           V   DT+ +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 VESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 303



 Score =  153 bits (386), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 105/293 (35%), Positives = 166/293 (56%), Gaps = 16/293 (5%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDT------LQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESM 170
           L   NI  E T      L ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  
Sbjct: 208 LSDYNIQKESTHSPCSTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD- 266

Query: 171 RICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILE 228
           +  IP +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LE
Sbjct: 267 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 326

Query: 229 VAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           V   DT+ +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 VESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 379



 Score =  129 bits (325), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 82/219 (37%), Positives = 128/219 (58%), Gaps = 5/219 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNES 277
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 217



 Score =  100 bits (250), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 72/218 (33%), Positives = 120/218 (55%), Gaps = 14/218 (6%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIHNDS- 59
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S     S 
Sbjct: 167 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTHSPCST 224

Query: 60  --------GVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKL 111
                   G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK 
Sbjct: 225 LHLVLRLRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQ 283

Query: 112 IESYITLDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESM 170
           +E   TL   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  
Sbjct: 284 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD- 342

Query: 171 RICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQII 208
           +  IP +   L   G+QL++ +TL+ Y+I++   L ++
Sbjct: 343 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 380



 Score = 92.0 bits (227), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 56/145 (38%), Positives = 88/145 (60%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TL+ Y+
Sbjct: 2   QIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F  +QLED R L+ Y I  ES ++L
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHL 145


>gi|344243115|gb|EGV99218.1| Ubiquitin [Cricetulus griseus]
          Length = 430

 Score =  153 bits (386), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 104/287 (36%), Positives = 162/287 (56%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E    
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRP 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV    T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPRDTIENVKAWIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ + L+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRPLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPRDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK  +  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IENVKAWIQDKEGIPPDQQRLIFAGKQLEDGRPLSDYNIQKESTLHL 297



 Score =  149 bits (377), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 102/287 (35%), Positives = 160/287 (55%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G  + DY I   S +H    
Sbjct: 91  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRPLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+    DTIEN+K  I+ +EGIP  +  + + GK +E    
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEPRDTIENVKAWIQDKEGIPPDQQRLIFAGKQLEDGRP 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV    T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPRDTIENVKAWIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ + L+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 267 DQQRLIFAGKQLEDGRPLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPRDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK  +  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IENVKAWIQDKEGIPPDQQRLIFAGKQLEDGRPLSDYNIQKESTLHL 373



 Score =  126 bits (316), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 82/223 (36%), Positives = 129/223 (57%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ + L+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRPLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPRDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K  +  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAWIQDKEGIPPDQQRLIFAGKQLEDGRPLSDYNIQKESTLHL 221



 Score =  113 bits (282), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 82/245 (33%), Positives = 132/245 (53%), Gaps = 10/245 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+  + IE +K  I  K  E I  D   L +AG+QLE+G  + DY I   S +H    
Sbjct: 167 LEVEPRDTIENVKAWIQDK--EGIPPDQQRLIFAGKQLEDGRPLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+    DTIEN+K  I+ +EGIP  +  + + GK +E    
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVEPRDTIENVKAWIQDKEGIPPDQQRLIFAGKQLEDGRP 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV    T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPRDTIENVKAWIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ + L+ Y+I++   L ++  ++    IFVK L G+ I LEV   +T
Sbjct: 343 DQQRLIFAGKQLEDGRPLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSNT 402

Query: 235 VRDVK 239
           ++  K
Sbjct: 403 IKKSK 407


>gi|224079387|ref|XP_002305847.1| predicted protein [Populus trichocarpa]
 gi|222848811|gb|EEE86358.1| predicted protein [Populus trichocarpa]
          Length = 369

 Score =  152 bits (385), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 97/285 (34%), Positives = 168/285 (58%), Gaps = 8/285 (2%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           MKV++++ I  +K     K  E I +   ELF+ G +L++   V+DYGIP ++ +H    
Sbjct: 13  MKVQRSDTIGTIKSAFCEK--EGIPKSFQELFFNGDRLKDDQRVVDYGIPKDATLHMILQ 70

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
            S  +KL    PS +K+  ++A   DT++ IK +I  +E I  H+Y++ Y G+++E   +
Sbjct: 71  SSVGVKLLVVIPSRQKSVVVEARTYDTVQKIKAVILEKEQILPHQYNLVYAGEVLEDDRS 130

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L  LN+ +E TL +I  PK+L    V TP   TVKL+V+  ++V +VK ++  + I +P 
Sbjct: 131 LASLNLQSEPTLHLIFNPKDLLSFSVITPAGETVKLKVKFLYSVSEVKAIIGGV-IGVPV 189

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSIFVKLLNGRYIILEVAKFDTVR 236
            D +L   G++L++  +LA  D++E  +L++       +FVK  +G+ I L V + DTV 
Sbjct: 190 SDYDLIYQGKKLEDSNSLACCDLQEESILEMSPQT-FQVFVKAWSGKTITLNVHQRDTVE 248

Query: 237 DVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           DVKDK+F+++G     Q +VF  ++LE + +LA Y I   + +++
Sbjct: 249 DVKDKIFQKLGGPSYCQSIVFSGKRLEANLDLAYYNIRKNATLHM 293



 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 60/225 (26%), Positives = 105/225 (46%), Gaps = 8/225 (3%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M +Y K     KT  +K  RSDTI  IK     +EGIP    ++++ G  ++    +   
Sbjct: 1   MTIYLKV---MKTSTMKVQRSDTIGTIKSAFCEKEGIPKSFQELFFNGDRLKDDQRVVDY 57

Query: 122 NINNEDTLQMISVPKELQEIFVQTPT--STVKLEVRRAHTVLDVKKMVESMRICIPSEDC 179
            I  + TL MI       ++ V  P+   +V +E R   TV  +K ++      +P +  
Sbjct: 58  GIPKDATLHMILQSSVGVKLLVVIPSRQKSVVVEARTYDTVQKIKAVILEKEQILPHQ-Y 116

Query: 180 ELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKH--SIFVKLLNGRYIILEVAKFDTVRD 237
            L   GE L++ ++LA  +++    L +I + K   S  V    G  + L+V    +V +
Sbjct: 117 NLVYAGEVLEDDRSLASLNLQSEPTLHLIFNPKDLLSFSVITPAGETVKLKVKFLYSVSE 176

Query: 238 VKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNLT 282
           VK  +   IG       L+++ ++LED  +LA   +  ESI+ ++
Sbjct: 177 VKAIIGGVIGVPVSDYDLIYQGKKLEDSNSLACCDLQEESILEMS 221



 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/179 (25%), Positives = 88/179 (49%), Gaps = 7/179 (3%)

Query: 30  ELFYAGQQLENGLTVIDYGIPNNSVIHNDSGVMKLYFKTPSNEKTFELKANRSDTIENIK 89
           +L Y G++LE+  ++    +   S++       +++ K  S  KT  L  ++ DT+E++K
Sbjct: 193 DLIYQGKKLEDSNSLACCDLQEESILEMSPQTFQVFVKAWSG-KTITLNVHQRDTVEDVK 251

Query: 90  FIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEIFVQTPTST 149
             I  + G P +   I + GK +E+ + L   NI    TL M+  P     I  +   S 
Sbjct: 252 DKIFQKLGGPSYCQSIVFSGKRLEANLDLAYYNIRKNATLHMVFSP---STITTKMGLSQ 308

Query: 150 VKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQII 208
           +  E   +  + D+K M+++    +PS   E++     LQ+  ++A Y+I E++ L ++
Sbjct: 309 IGAEPNSSARIRDLKAMIQNK---LPSTVKEVYFREIPLQDECSIASYNIGESDELTVV 364


>gi|578545|emb|CAA84813.1| ubiquitin [Tetrahymena pyriformis]
          Length = 379

 Score =  152 bits (384), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 100/287 (34%), Positives = 163/287 (56%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V +T+ IE +K +I  K  E I  D   L +AG+QLE+G TV DY I   S +H    
Sbjct: 91  LDVAQTDNIENIKQKIQDK--EGIPPDQQRLIFAGKQLEDGRTVSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L  + +D IEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQVFIKTLTG-KTITLDVDSADNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           +   NI  E TL ++   +   ++FV+T T  T+ L+V  +  + +VK  ++  +  IP 
Sbjct: 208 VSDYNIQKESTLHLVLRLRGGMQVFVKTLTGKTITLDVDSSDNIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +T++ Y+I++   L ++  ++    IFVK L G+ I L+V   D 
Sbjct: 267 DQQRLIFAGKQLEDGRTVSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVNSTDN 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R++A Y I  ES ++L
Sbjct: 327 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRSIADYNISKESTLHL 373



 Score =  149 bits (376), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 99/287 (34%), Positives = 161/287 (56%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V  T+ IE +K +I  K  E I  D   L +AG+QLE+G TV DY I   S +H    
Sbjct: 15  LDVASTDNIENIKQKIQDK--EGIPPDQQRLIFAGKQLEDGRTVSDYNIQKESTVHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L   ++D IENIK  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQVFVKTLTG-KTITLDVAQTDNIENIKQKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           +   NI  E TL ++   +   ++F++T T  T+ L+V  A  + +VK  ++  +  IP 
Sbjct: 132 VSDYNIQKESTLHLVLRLRGGMQVFIKTLTGKTITLDVDSADNIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +T++ Y+I++   L ++  ++    +FVK L G+ I L+V   D 
Sbjct: 191 DQQRLIFAGKQLEDGRTVSDYNIQKESTLHLVLRLRGGMQVFVKTLTGKTITLDVDSSDN 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R ++ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTVSDYNIQKESTLHL 297



 Score =  115 bits (287), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 71/223 (31%), Positives = 128/223 (57%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L    +D IENIK  I+ +EGIP  +  + + GK +E   T+   
Sbjct: 1   MQIFVKTLTG-KTVTLDVASTDNIENIKQKIQDKEGIPPDQQRLIFAGKQLEDGRTVSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E T+ ++   +   ++FV+T T  T+ L+V +   + ++K+ ++  +  IP +   
Sbjct: 60  NIQKESTVHLVLRLRGGMQVFVKTLTGKTITLDVAQTDNIENIKQKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +T++ Y+I++   L ++  ++    +F+K L G+ I L+V   D + +V
Sbjct: 119 LIFAGKQLEDGRTVSDYNIQKESTLHLVLRLRGGMQVFIKTLTGKTITLDVDSADNIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R ++ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTVSDYNIQKESTLHL 221



 Score =  100 bits (250), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 70/212 (33%), Positives = 114/212 (53%), Gaps = 8/212 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V   + IE +K +I  K  E I  D   L +AG+QLE+G TV DY I   S +H    
Sbjct: 167 LDVDSADNIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTVSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L  + SD IEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQVFVKTLTG-KTITLDVDSSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           +   NI  E TL ++   +   +IFV+T T  T+ L+V     + +VK  ++  +  IP 
Sbjct: 284 VSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVNSTDNIENVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQII 208
           +   L   G+QL++ +++A Y+I +   L ++
Sbjct: 343 DQQRLIFAGKQLEDGRSIADYNISKESTLHLV 374


>gi|388578851|gb|EIM19184.1| ubiquitin [Wallemia sebi CBS 633.66]
          Length = 701

 Score =  152 bits (384), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 96/261 (36%), Positives = 151/261 (57%), Gaps = 8/261 (3%)

Query: 27  DLPELFYAGQQLENGLTVIDYGIPNNSVIH---NDSGVMKLYFKTPSNEKTFELKANRSD 83
           D   L +AG+QLE+G T+ DY I   S +H      G M+++ KT +  KT  L+   SD
Sbjct: 435 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQVFVKTLTG-KTITLEVESSD 493

Query: 84  TIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEIFV 143
           TI+N+K  I+ +EGIP  +  + + GK +E   TL   NI  E TL ++   +   ++FV
Sbjct: 494 TIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQVFV 553

Query: 144 QTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKEN 202
           +T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TL+ Y+I++ 
Sbjct: 554 KTLTGKTITLEVESSDTIDNVKTKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 612

Query: 203 EVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQ 260
             L ++  ++    +FVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+F  +
Sbjct: 613 STLHLVLRLRGGMQVFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGK 672

Query: 261 QLEDDRNLASYKIVNESIVNL 281
           QLED R L+ Y I  ES ++L
Sbjct: 673 QLEDGRTLSDYNIQKESTLHL 693



 Score =  144 bits (363), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 103/327 (31%), Positives = 166/327 (50%), Gaps = 49/327 (14%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 218 LEVESSDTIDNVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 275

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+    DTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 276 LRGGMQIFVKTLTG-KTITLEVESQDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 334

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVES------- 169
           L   NI  E TL ++   +   ++FV+T T  T+ LEV  + T+ +VK  ++        
Sbjct: 335 LSDYNIQKESTLHLVLRLRGGMQVFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPD 394

Query: 170 ---------------------------------MRICIPSEDCELFRGGEQLQNLKTLAY 196
                                            +R  IP +   L   G+QL++ +TL+ 
Sbjct: 395 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGIPPDQQRLIFAGKQLEDGRTLSD 454

Query: 197 YDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQR 254
           Y+I++   L ++  ++    +FVK L G+ I LEV   DT+ +VK K+  + G  PD QR
Sbjct: 455 YNIQKESTLHLVLRLRGGMQVFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQR 514

Query: 255 LVFKRQQLEDDRNLASYKIVNESIVNL 281
           L+F  +QLED R L+ Y I  ES ++L
Sbjct: 515 LIFAGKQLEDGRTLSDYNIQKESTLHL 541



 Score =  143 bits (361), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 105/328 (32%), Positives = 168/328 (51%), Gaps = 51/328 (15%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+  + I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 294 LEVESQDTIDNVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 351

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 352 LRGGMQVFVKTLTG-KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 410

Query: 118 LDVLNINNEDTLQMI-----SVPKELQ--------------------------------- 139
           L   NI  E TL ++      +P + Q                                 
Sbjct: 411 LSDYNIQKESTLHLVLRLRGGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 470

Query: 140 ---EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLA 195
              ++FV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TL+
Sbjct: 471 GGMQVFVKTLTGKTITLEVESSDTIDNVKTKIQD-KEGIPPDQQRLIFAGKQLEDGRTLS 529

Query: 196 YYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQ 253
            Y+I++   L ++  ++    +FVK L G+ I LEV   DT+ +VK K+  + G  PD Q
Sbjct: 530 DYNIQKESTLHLVLRLRGGMQVFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQ 589

Query: 254 RLVFKRQQLEDDRNLASYKIVNESIVNL 281
           RL+F  +QLED R L+ Y I  ES ++L
Sbjct: 590 RLIFAGKQLEDGRTLSDYNIQKESTLHL 617



 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 105/337 (31%), Positives = 166/337 (49%), Gaps = 59/337 (17%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+  + I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESQDTIDNVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKT-----------------------------PSNE---------------- 72
             G M+++ KT                             P ++                
Sbjct: 149 LRGGMQIFVKTLTGKTITLEVESQDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGLFV 208

Query: 73  -----KTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNED 127
                KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   NI  E 
Sbjct: 209 KTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 268

Query: 128 TLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGE 186
           TL ++   +   +IFV+T T  T+ LEV    T+ +VK  ++  +  IP +   L   G+
Sbjct: 269 TLHLVLRLRGGMQIFVKTLTGKTITLEVESQDTIDNVKTKIQD-KEGIPPDQQRLIFAGK 327

Query: 187 QLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFR 244
           QL++ +TL+ Y+I++   L ++  ++    +FVK L G+ I LEV   DT+ +VK K+  
Sbjct: 328 QLEDGRTLSDYNIQKESTLHLVLRLRGGMQVFVKTLTGKTITLEVESSDTIDNVKTKIQD 387

Query: 245 EIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 388 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 424



 Score =  136 bits (343), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 98/285 (34%), Positives = 149/285 (52%), Gaps = 31/285 (10%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LDVESSDTIDNVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+    DTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESQDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV    T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESQDTIDNVKTKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSIFVKLLNGRYIILEVAKFDTVR 236
           +   L   G+QL++                        +FVK L G+ I LEV   DT+ 
Sbjct: 191 DQQRLIFAGKQLED-----------------------GLFVKTLTGKTITLEVESSDTID 227

Query: 237 DVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 228 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 272



 Score =  116 bits (290), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 76/206 (36%), Positives = 119/206 (57%), Gaps = 5/206 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L    SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQVFVKTLTG-KTITLDVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV    T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESQDTIDNVKTKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESQDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLED 264
           K K+  + G  PD QRL+F  +QLED
Sbjct: 179 KTKIQDKEGIPPDQQRLIFAGKQLED 204



 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 71/216 (32%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 487 LEVESSDTIDNVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 544

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 545 LRGGMQVFVKTLTG-KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 603

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   ++FV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 604 LSDYNIQKESTLHLVLRLRGGMQVFVKTLTGKTITLEVESSDTIDNVKTKIQD-KEGIPP 662

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 663 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 698



 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 31/67 (46%), Positives = 43/67 (64%)

Query: 215 IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIV 274
           +FVK L G+ I L+V   DT+ +VK K+  + G  PD QRL+F  +QLED R L+ Y I 
Sbjct: 3   VFVKTLTGKTITLDVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 62

Query: 275 NESIVNL 281
            ES ++L
Sbjct: 63  KESTLHL 69


>gi|403366242|gb|EJY82919.1| Ubiquitin [Oxytricha trifallax]
          Length = 379

 Score =  152 bits (383), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 101/277 (36%), Positives = 158/277 (57%), Gaps = 10/277 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LDVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I L+V   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASY 271
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 287



 Score =  148 bits (373), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 106/288 (36%), Positives = 161/288 (55%), Gaps = 13/288 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LDVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYY---DIKENEVLQIIRHVKHSIFVKLLNGRYIILEVAKFD 233
           +   L   G+QL++ +TL+ Y    I  +   Q  R   ++IFVK L G+ I L+V   D
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYTSRKIYSSFGPQTQRW--YAIFVKTLTGKTITLDVEPSD 324

Query: 234 TVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           T+ +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 325 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 372



 Score =  129 bits (323), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 82/223 (36%), Positives = 130/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I L+V   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score = 88.2 bits (217), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 72/223 (32%), Positives = 120/223 (53%), Gaps = 19/223 (8%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LDVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMI--SVPKELQE---IFVQTPTS-TVKLEVRRAHTVLDVKKMVESMR 171
           L      ++ T + I  S   + Q    IFV+T T  T+ L+V  + T+ +VK  ++  +
Sbjct: 284 L------SDYTSRKIYSSFGPQTQRWYAIFVKTLTGKTITLDVEPSDTIENVKAKIQD-K 336

Query: 172 ICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
             IP +   L   G+QL++ +TL+ Y+I++   L ++  ++  
Sbjct: 337 EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 379


>gi|449479809|ref|XP_004177054.1| PREDICTED: LOW QUALITY PROTEIN: polyubiquitin-C-like [Taeniopygia
           guttata]
          Length = 534

 Score =  151 bits (382), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 159/287 (55%), Gaps = 9/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIHND-- 58
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T  DY I   +V      
Sbjct: 243 LEVELSDTIENVKAKIQDK--EGIPPDSRXLIFAGKQLEDGRTFSDYNIQKVAVAETSVC 300

Query: 59  -SGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
            SG     F      KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LSGQQWQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 360

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 361 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 419

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 420 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 479

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 480 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 526



 Score =  144 bits (364), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 102/288 (35%), Positives = 159/288 (55%), Gaps = 11/288 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +    +     T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGCXVLPLCMTGKTITLEVELSDTIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQ---IIRHVKHSIFVKLLNGRYIILEVAKFD 233
           +   L   G+QL++ +T + Y+I++  V +    +   +  IFVK L G+ I LEV   D
Sbjct: 267 DSRXLIFAGKQLEDGRTFSDYNIQKVAVAETSVCLSGQQWQIFVKTLTGKTITLEVEPSD 326

Query: 234 TVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           T+ +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 374



 Score =  143 bits (360), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 98/279 (35%), Positives = 157/279 (56%), Gaps = 10/279 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSIFV--KLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    V    + G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGCXVLPLCMTGKTITLEVELSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKI 273
           + +VK K+  + G  PDS+ L+F  +QLED R  + Y I
Sbjct: 251 IENVKAKIQDKEGIPPDSRXLIFAGKQLEDGRTFSDYNI 289



 Score =  142 bits (359), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 101/291 (34%), Positives = 157/291 (53%), Gaps = 17/291 (5%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---- 56
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 57  --NDSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIES 114
                 V+ L        KT  L+   SDTIEN+K  I+ +EGIP     + + GK +E 
Sbjct: 225 LRGGCXVLPLCM----TGKTITLEVELSDTIENVKAKIQDKEGIPPDSRXLIFAGKQLED 280

Query: 115 YITLDVLNINNEDTLQM-ISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRI 172
             T    NI      +  + +  +  +IFV+T T  T+ LEV  + T+ +VK  ++  + 
Sbjct: 281 GRTFSDYNIQKVAVAETSVCLSGQQWQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KE 339

Query: 173 CIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVA 230
            IP +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV 
Sbjct: 340 GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 399

Query: 231 KFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
             DT+ +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 400 PSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 450



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  107 bits (267), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 74/218 (33%), Positives = 123/218 (56%), Gaps = 8/218 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 320 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 377

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 378 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 436

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 437 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 495

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  
Sbjct: 496 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 533


>gi|298710587|emb|CBJ32017.1| similar to ubiquitin [Ectocarpus siliculosus]
          Length = 609

 Score =  151 bits (382), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 102/287 (35%), Positives = 162/287 (56%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LDVEPSDTIDGVKQKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L    SDTI+ +K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ L+V  + T+  VK+ ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I L+V   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           +  VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  151 bits (382), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 102/287 (35%), Positives = 162/287 (56%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LDVEPSDTIDGVKQKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L    SDTI+ +K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ L+V  + T+  VK+ ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I L+V   DT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           +  VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 327 IDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score =  151 bits (382), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 102/287 (35%), Positives = 162/287 (56%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LDVEPSDTIDGVKQKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L    SDTI+ +K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ L+V  + T+  VK+ ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I L+V   DT
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDT 402

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           +  VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 403 IDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449



 Score =  151 bits (382), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 102/287 (35%), Positives = 162/287 (56%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 243 LDVEPSDTIDGVKQKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L    SDTI+ +K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT 359

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ L+V  + T+  VK+ ++  +  IP 
Sbjct: 360 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQD-KEGIPP 418

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I L+V   DT
Sbjct: 419 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDT 478

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           +  VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 479 IDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 525



 Score =  151 bits (382), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 102/287 (35%), Positives = 162/287 (56%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 319 LDVEPSDTIDGVKQKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L    SDTI+ +K  I+ +EGIP  +  + + GK +E   T
Sbjct: 377 LRGGMQIFVKTLTG-KTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT 435

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ L+V  + T+  VK+ ++  +  IP 
Sbjct: 436 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQD-KEGIPP 494

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I L+V   DT
Sbjct: 495 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDT 554

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           +  VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 555 IDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 601



 Score =  124 bits (312), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 80/223 (35%), Positives = 128/223 (57%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L    SDTI+ +K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ L+V  + T+  VK+ ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I L+V   DT+  V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  100 bits (248), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 70/218 (32%), Positives = 120/218 (55%), Gaps = 8/218 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 395 LDVEPSDTIDGVKQKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 452

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L    SDTI+ +K  I+ +EGIP  +  + + GK +E   T
Sbjct: 453 LRGGMQIFVKTLTG-KTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT 511

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ L+V  + T+  VK+ ++  +  IP 
Sbjct: 512 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQD-KEGIPP 570

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  
Sbjct: 571 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 608


>gi|413926507|gb|AFW66439.1| putative ubiquitin family protein [Zea mays]
          Length = 297

 Score =  151 bits (381), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 162/287 (56%), Gaps = 18/287 (6%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV     
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVES--- 247

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
             D++DK     G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 248 -SDIQDKE----GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 289



 Score =  133 bits (335), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score = 98.6 bits (244), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 71/216 (32%), Positives = 119/216 (55%), Gaps = 16/216 (7%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  +    D++      +  IP 
Sbjct: 208 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESS----DIQD-----KEGIPP 258

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TLA Y+I++   L ++  ++
Sbjct: 259 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 294


>gi|301096555|ref|XP_002897374.1| ubiquitin family protein, putative [Phytophthora infestans T30-4]
 gi|262107065|gb|EEY65117.1| ubiquitin family protein, putative [Phytophthora infestans T30-4]
 gi|348684366|gb|EGZ24181.1| hypothetical protein PHYSODRAFT_353926 [Phytophthora sojae]
          Length = 305

 Score =  150 bits (380), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 100/287 (34%), Positives = 165/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LDVEPSDSIDNVKQKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L    SD+I+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLDVEPSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ L+V  + ++ +VK+ ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDSIDNVKQKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I L+V   D+
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDS 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 251 IDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score =  123 bits (309), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 78/223 (34%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L    SD+I+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLDVEPSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ L+V  + ++ +VK+ ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDSIDNVKQKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I L+V   D++ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDSIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  100 bits (249), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 69/216 (31%), Positives = 122/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LDVEPSDSIDNVKQKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L    SD+I+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLDVEPSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ L+V  + ++ +VK+ ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDSIDNVKQKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 302


>gi|16552475|dbj|BAB71316.1| unnamed protein product [Homo sapiens]
          Length = 388

 Score =  150 bits (380), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 101/270 (37%), Positives = 155/270 (57%), Gaps = 10/270 (3%)

Query: 6   TEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---NDSGVM 62
           ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H      G M
Sbjct: 66  SDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 123

Query: 63  KLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLN 122
           +++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   N
Sbjct: 124 QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 182

Query: 123 INNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCEL 181
           I  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L
Sbjct: 183 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQRL 241

Query: 182 FRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVK 239
              G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK
Sbjct: 242 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVK 301

Query: 240 DKLFREIGQAPDSQRLVFKRQQLEDDRNLA 269
            K+  + G  PD QRL+F  +QLED R L+
Sbjct: 302 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLS 331



 Score =  140 bits (353), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 98/284 (34%), Positives = 152/284 (53%), Gaps = 34/284 (11%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIHNDSG 60
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I           
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNI----------- 61

Query: 61  VMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDV 120
                            +   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL  
Sbjct: 62  -----------------QKEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 104

Query: 121 LNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDC 179
            NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +  
Sbjct: 105 YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQ 163

Query: 180 ELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRD 237
            L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +
Sbjct: 164 RLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIEN 223

Query: 238 VKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 224 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 267



 Score =  107 bits (266), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 74/222 (33%), Positives = 116/222 (52%), Gaps = 33/222 (14%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTSTVKLEVRRAHTVLDVKKMVESMRICIPSEDCEL 181
           NI  E                   P+ T++          +VK  ++  +  IP +   L
Sbjct: 60  NIQKE-------------------PSDTIE----------NVKAKIQD-KEGIPPDQQRL 89

Query: 182 FRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVK 239
              G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK
Sbjct: 90  IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVK 149

Query: 240 DKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
            K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 150 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 191



 Score = 63.9 bits (154), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 52/171 (30%), Positives = 77/171 (45%), Gaps = 41/171 (23%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 213 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 270

Query: 58  DSGVMKLYFKT-----------PSNE-------------------------KTFELKANR 81
             G M+++ KT           PS+                          K  E     
Sbjct: 271 LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 330

Query: 82  SDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMI 132
           SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   NI  E TL ++
Sbjct: 331 SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 381


>gi|27734398|gb|AAM51223.1| polyubiquitin [Bigelowiella natans]
 gi|27734402|gb|AAM51224.1| polyubiquitin [Bigelowiella natans]
          Length = 306

 Score =  150 bits (379), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 105/290 (36%), Positives = 159/290 (54%), Gaps = 13/290 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIHN--- 57
           + V  ++ I  +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 17  LDVDSSDTINTVKQKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 74

Query: 58  -DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYI 116
              G M+++ KT +  KT  L  + SDTI  +K  I+ +EGIP  +  + + GK +E   
Sbjct: 75  LRGGSMQIFVKTLTG-KTITLDVDSSDTINTVKQKIQDKEGIPPDQQRLIFAGKQLEDGR 133

Query: 117 TLDVLNINNEDTLQMI-SVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICI 174
           TL   NI  E TL ++  +     +IFV+T T  T+ L+V  + T+  VK+ ++  +  I
Sbjct: 134 TLADYNIQKESTLHLVLRLRGGSMQIFVKTLTGKTITLDVDSSDTINTVKQKIQD-KEGI 192

Query: 175 PSEDCELFRGGEQLQNLKTLAYYDIKENEVLQII---RHVKHSIFVKLLNGRYIILEVAK 231
           P +   L   G+QL++ +TLA Y+I++   L ++   R     IFVK L G+ I L+V  
Sbjct: 193 PPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGSMQIFVKTLTGKTITLDVDS 252

Query: 232 FDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
            DT+  VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 253 SDTINTVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 302



 Score =  123 bits (309), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 83/225 (36%), Positives = 127/225 (56%), Gaps = 7/225 (3%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L  + SDTI  +K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 3   MQIFVKTLTG-KTITLDVDSSDTINTVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 61

Query: 122 NINNEDTLQMI-SVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDC 179
           NI  E TL ++  +     +IFV+T T  T+ L+V  + T+  VK+ ++  +  IP +  
Sbjct: 62  NIQKESTLHLVLRLRGGSMQIFVKTLTGKTITLDVDSSDTINTVKQKIQD-KEGIPPDQQ 120

Query: 180 ELFRGGEQLQNLKTLAYYDIKENEVLQII---RHVKHSIFVKLLNGRYIILEVAKFDTVR 236
            L   G+QL++ +TLA Y+I++   L ++   R     IFVK L G+ I L+V   DT+ 
Sbjct: 121 RLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGSMQIFVKTLTGKTITLDVDSSDTIN 180

Query: 237 DVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
            VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 181 TVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 225



 Score = 97.8 bits (242), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 71/214 (33%), Positives = 116/214 (54%), Gaps = 10/214 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIHN--- 57
           + V  ++ I  +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 94  LDVDSSDTINTVKQKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 151

Query: 58  -DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYI 116
              G M+++ KT +  KT  L  + SDTI  +K  I+ +EGIP  +  + + GK +E   
Sbjct: 152 LRGGSMQIFVKTLTG-KTITLDVDSSDTINTVKQKIQDKEGIPPDQQRLIFAGKQLEDGR 210

Query: 117 TLDVLNINNEDTLQMI-SVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICI 174
           TL   NI  E TL ++  +     +IFV+T T  T+ L+V  + T+  VK+ ++  +  I
Sbjct: 211 TLADYNIQKESTLHLVLRLRGGSMQIFVKTLTGKTITLDVDSSDTINTVKQKIQD-KEGI 269

Query: 175 PSEDCELFRGGEQLQNLKTLAYYDIKENEVLQII 208
           P +   L   G+QL++ +TLA Y+I++   L ++
Sbjct: 270 PPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 303


>gi|27734407|gb|AAM51225.1| polyubiquitin [Bigelowiella natans]
          Length = 320

 Score =  150 bits (378), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 105/290 (36%), Positives = 159/290 (54%), Gaps = 13/290 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIHN--- 57
           + V  ++ I  +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 17  LDVDSSDTINTVKQKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 74

Query: 58  -DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYI 116
              G M+++ KT +  KT  L  + SDTI  +K  I+ +EGIP  +  + + GK +E   
Sbjct: 75  LRGGSMQIFVKTLTG-KTITLDVDSSDTINTVKQKIQDKEGIPPDQQRLIFAGKQLEDGR 133

Query: 117 TLDVLNINNEDTLQMI-SVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICI 174
           TL   NI  E TL ++  +     +IFV+T T  T+ L+V  + T+  VK+ ++  +  I
Sbjct: 134 TLADYNIQKESTLHLVLRLRGGSMQIFVKTLTGKTITLDVDSSDTINTVKQKIQD-KEGI 192

Query: 175 PSEDCELFRGGEQLQNLKTLAYYDIKENEVLQII---RHVKHSIFVKLLNGRYIILEVAK 231
           P +   L   G+QL++ +TLA Y+I++   L ++   R     IFVK L G+ I L+V  
Sbjct: 193 PPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGSMQIFVKTLTGKTITLDVDS 252

Query: 232 FDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
            DT+  VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 253 SDTINTVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 302



 Score =  123 bits (308), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 83/225 (36%), Positives = 127/225 (56%), Gaps = 7/225 (3%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L  + SDTI  +K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 3   MQIFVKTLTG-KTITLDVDSSDTINTVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 61

Query: 122 NINNEDTLQMI-SVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDC 179
           NI  E TL ++  +     +IFV+T T  T+ L+V  + T+  VK+ ++  +  IP +  
Sbjct: 62  NIQKESTLHLVLRLRGGSMQIFVKTLTGKTITLDVDSSDTINTVKQKIQD-KEGIPPDQQ 120

Query: 180 ELFRGGEQLQNLKTLAYYDIKENEVLQII---RHVKHSIFVKLLNGRYIILEVAKFDTVR 236
            L   G+QL++ +TLA Y+I++   L ++   R     IFVK L G+ I L+V   DT+ 
Sbjct: 121 RLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGSMQIFVKTLTGKTITLDVDSSDTIN 180

Query: 237 DVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
            VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 181 TVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 225



 Score =  101 bits (251), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 77/229 (33%), Positives = 122/229 (53%), Gaps = 13/229 (5%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIHN--- 57
           + V  ++ I  +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 94  LDVDSSDTINTVKQKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 151

Query: 58  -DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYI 116
              G M+++ KT +  KT  L  + SDTI  +K  I+ +EGIP  +  + + GK +E   
Sbjct: 152 LRGGSMQIFVKTLTG-KTITLDVDSSDTINTVKQKIQDKEGIPPDQQRLIFAGKQLEDGR 210

Query: 117 TLDVLNINNEDTLQMI-SVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICI 174
           TL   NI  E TL ++  +     +IFV+T T  T+ L+V  + T+  VK+ ++  +  I
Sbjct: 211 TLADYNIQKESTLHLVLRLRGGSMQIFVKTLTGKTITLDVDSSDTINTVKQKIQD-KEGI 269

Query: 175 PSEDCELFRGGEQLQNLKTLAYYDIKENEVLQII---RHVKHSIFVKLL 220
           P +   L   G+QL++ +TLA Y+I++   L ++   R     IFVK L
Sbjct: 270 PPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGSMQIFVKTL 318


>gi|223646966|gb|ACN10241.1| Ubiquitin [Salmo salar]
 gi|223672829|gb|ACN12596.1| Ubiquitin [Salmo salar]
          Length = 305

 Score =  150 bits (378), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 102/287 (35%), Positives = 163/287 (56%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  P  QR++F  +Q E+   L+ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPGQQRMIFAGKQPEEGGPLSDYNIQKESTLHL 297



 Score =  132 bits (332), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  102 bits (253), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 72/218 (33%), Positives = 118/218 (54%), Gaps = 8/218 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++      P 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPG 267

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
           +   +F  G+Q +    L+ Y+I++   L + R ++  
Sbjct: 268 QQRMIF-AGKQPEEGGPLSDYNIQKESTLHLFRRLRGG 304


>gi|145530714|ref|XP_001451129.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124418773|emb|CAK83732.1| unnamed protein product [Paramecium tetraurelia]
          Length = 624

 Score =  150 bits (378), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 102/287 (35%), Positives = 161/287 (56%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 182 LDVEPSDTIDAVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 239

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L    SDTI+ +K  I+ +EGIP  +  + + GK +E   T
Sbjct: 240 LRGGMQIFVKTLTG-KTITLDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 298

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ L+V  + T+  VK  ++  +  IP 
Sbjct: 299 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDAVKAKIQD-KEGIPP 357

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I L+V   DT
Sbjct: 358 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDT 417

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           +  VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 418 IDAVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 464



 Score =  148 bits (374), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 101/287 (35%), Positives = 161/287 (56%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 334 LDVEPSDTIDAVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 391

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L    SDTI+ +K  I+ +EGIP  +  + + GK +E   T
Sbjct: 392 LRGGMQIFVKTLTG-KTITLDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 450

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV++ T  T+ L+V  + T+  VK  ++  +  IP 
Sbjct: 451 LSDYNIQKESTLHLVLRLRGGMQIFVKSLTGKTITLDVEPSDTIDAVKAKIQD-KEGIPP 509

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I L+V   DT
Sbjct: 510 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDT 569

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           +  VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 570 IDAVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 616



 Score =  122 bits (306), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 92/284 (32%), Positives = 148/284 (52%), Gaps = 14/284 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIHNDSG 60
           + V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 40  LDVEPSDTIDAVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL--- 94

Query: 61  VMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDV 120
           V++L        KT  L    SDTI+ +K  I+ +EGIP  +  + +  K+I  +     
Sbjct: 95  VLRLKRWNTLTGKTITLDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFCRKVIRRW----- 149

Query: 121 LNINNEDTLQMISVPKELQ-EIFVQTPTSTVKLEVRRAHTVLDVKKMVESMRICIPSEDC 179
            N      L+ I  P   + E +      T+ L+V  + T+  VK  ++  +  IP +  
Sbjct: 150 KNTFRLQHLKGIHSPLSFEIERWNTLTGKTITLDVEPSDTIDAVKAKIQD-KEGIPPDQQ 208

Query: 180 ELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRD 237
            L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I L+V   DT+  
Sbjct: 209 RLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDA 268

Query: 238 VKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 269 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 312



 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 77/212 (36%), Positives = 120/212 (56%), Gaps = 4/212 (1%)

Query: 73  KTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMI 132
           KT  L    SDTI+ +K  I+ +EGIP  +  + + GK +E   TL   NI  E TL ++
Sbjct: 178 KTITLDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 237

Query: 133 SVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNL 191
              +   +IFV+T T  T+ L+V  + T+  VK  ++  +  IP +   L   G+QL++ 
Sbjct: 238 LRLRGGMQIFVKTLTGKTITLDVEPSDTIDAVKAKIQD-KEGIPPDQQRLIFAGKQLEDG 296

Query: 192 KTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQA 249
           +TL+ Y+I++   L ++  ++    IFVK L G+ I L+V   DT+  VK K+  + G  
Sbjct: 297 RTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDAVKAKIQDKEGIP 356

Query: 250 PDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 357 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 388



 Score = 98.2 bits (243), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 69/212 (32%), Positives = 117/212 (55%), Gaps = 8/212 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 410 LDVEPSDTIDAVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 467

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ K+ +  KT  L    SDTI+ +K  I+ +EGIP  +  + + GK +E   T
Sbjct: 468 LRGGMQIFVKSLTG-KTITLDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 526

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ L+V  + T+  VK  ++  +  IP 
Sbjct: 527 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDAVKAKIQD-KEGIPP 585

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQII 208
           +   L   G+QL++ +TL+ Y+I++   L ++
Sbjct: 586 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 617



 Score = 84.0 bits (206), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 69/237 (29%), Positives = 114/237 (48%), Gaps = 19/237 (8%)

Query: 50  PNNSVIHNDSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGG 109
           P ++++    G M+++ KT +  KT  L    SDTI+ +K  I+ +EGIP  +  + + G
Sbjct: 14  PLSTLVLRLRGGMQIFVKTLTG-KTITLDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAG 72

Query: 110 KLIESYITLDVLNINNEDTLQMISVPKELQEIFVQTPTSTVKLEVRRAHTVLDVKKMVES 169
           K +E   TL   NI  E TL ++   K    +       T+ L+V  + T+  VK  ++ 
Sbjct: 73  KQLEDGRTLSDYNIQKESTLHLVLRLKRWNTLT----GKTITLDVEPSDTIDAVKAKIQD 128

Query: 170 MRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSIFVKL-----LNGRY 224
                P +   +F         K +  +  K    LQ ++ +   +  ++     L G+ 
Sbjct: 129 KEGIPPDQQRLIF-------CRKVIRRW--KNTFRLQHLKGIHSPLSFEIERWNTLTGKT 179

Query: 225 IILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           I L+V   DT+  VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 180 ITLDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 236


>gi|28394784|gb|AAO42469.1| putative polyubiquitin [Arabidopsis lyrata]
          Length = 289

 Score =  149 bits (376), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 104/287 (36%), Positives = 162/287 (56%), Gaps = 18/287 (6%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 6   LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 63

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 64  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 122

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 123 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 181

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV     
Sbjct: 182 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVES--- 238

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
             +++DK     G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 239 -SEIQDKE----GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 280



 Score =  130 bits (327), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 82/212 (38%), Positives = 124/212 (58%), Gaps = 4/212 (1%)

Query: 73  KTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMI 132
           KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   NI  E TL ++
Sbjct: 2   KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 61

Query: 133 SVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNL 191
              +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ 
Sbjct: 62  LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQRLIFAGKQLEDG 120

Query: 192 KTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQA 249
           +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  
Sbjct: 121 RTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIP 180

Query: 250 PDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 181 PDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 212



 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 72/220 (32%), Positives = 119/220 (54%), Gaps = 16/220 (7%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 82  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 139

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 140 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 198

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  +  + D        +  IP 
Sbjct: 199 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSE-IQD--------KEGIPP 249

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSIF 216
           +   L   G+QL++ +TLA Y+I++   L ++  ++   F
Sbjct: 250 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGSF 289



 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 29/60 (48%), Positives = 38/60 (63%)

Query: 222 GRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           G+ I LEV   DT+ +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 1   GKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 60


>gi|578546|emb|CAA84814.1| ubiquitin [Tetrahymena pyriformis]
          Length = 379

 Score =  149 bits (375), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 98/287 (34%), Positives = 162/287 (56%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V +T+ IE +K +I  K  E I  D   L +AG+QLE+G TV DY I   S +H    
Sbjct: 91  LDVAQTDNIENIKAKIQDK--EGIPSDQQRLIFAGKQLEDGRTVSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+ N SD IE+IK  I+ +EGIP  +  + + GK +E    
Sbjct: 149 LRGGMQVFVKTLTG-KTITLEVNSSDNIESIKSKIQDKEGIPSDQQRLIFAGKQLEDGRN 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           +   NI  E TL ++   +   ++FV+T T  T+ L+V  +  + +VK  ++  +  IPS
Sbjct: 208 ISDYNIQKESTLHLVLRLRGGMQVFVKTLTGKTITLDVDSSDNIENVKAKIQD-KEGIPS 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +T++ Y+I++   L ++  ++    IFVK L G+ + L++   D 
Sbjct: 267 DQQRLIFAGKQLEDGRTVSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTLTLDINSTDN 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G   D QRL+F  +QLED R ++ Y I  ES ++L
Sbjct: 327 IENVKAKIQDKEGIPTDQQRLIFAGKQLEDGRTVSDYNISKESTLHL 373



 Score =  147 bits (371), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 98/287 (34%), Positives = 158/287 (55%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V  T+ IE +K +I  K  E I  D   L +AG+QLE G TV DY I   S +H    
Sbjct: 15  LDVASTDNIENIKQKIQDK--EGIPSDQQRLIFAGKQLEEGRTVSDYNIQKESTVHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L   ++D IENIK  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQVFVKTLTG-KTITLDVAQTDNIENIKAKIQDKEGIPSDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           +   NI  E TL ++   +   ++FV+T T  T+ LEV  +  +  +K  ++  +  IPS
Sbjct: 132 VSDYNIQKESTLHLVLRLRGGMQVFVKTLTGKTITLEVNSSDNIESIKSKIQD-KEGIPS 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ + ++ Y+I++   L ++  ++    +FVK L G+ I L+V   D 
Sbjct: 191 DQQRLIFAGKQLEDGRNISDYNIQKESTLHLVLRLRGGMQVFVKTLTGKTITLDVDSSDN 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G   D QRL+F  +QLED R ++ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPSDQQRLIFAGKQLEDGRTVSDYNIQKESTLHL 297



 Score =  117 bits (293), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 73/223 (32%), Positives = 127/223 (56%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L    +D IENIK  I+ +EGIP  +  + + GK +E   T+   
Sbjct: 1   MQIFVKTLTG-KTVTLDVASTDNIENIKQKIQDKEGIPSDQQRLIFAGKQLEEGRTVSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E T+ ++   +   ++FV+T T  T+ L+V +   + ++K  ++  +  IPS+   
Sbjct: 60  NIQKESTVHLVLRLRGGMQVFVKTLTGKTITLDVAQTDNIENIKAKIQD-KEGIPSDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +T++ Y+I++   L ++  ++    +FVK L G+ I LEV   D +  +
Sbjct: 119 LIFAGKQLEDGRTVSDYNIQKESTLHLVLRLRGGMQVFVKTLTGKTITLEVNSSDNIESI 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G   D QRL+F  +QLED RN++ Y I  ES ++L
Sbjct: 179 KSKIQDKEGIPSDQQRLIFAGKQLEDGRNISDYNIQKESTLHL 221



 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 67/212 (31%), Positives = 116/212 (54%), Gaps = 8/212 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V  ++ IE +K +I  K  E I  D   L +AG+QLE+G  + DY I   S +H    
Sbjct: 167 LEVNSSDNIESIKSKIQDK--EGIPSDQQRLIFAGKQLEDGRNISDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L  + SD IEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQVFVKTLTG-KTITLDVDSSDNIENVKAKIQDKEGIPSDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           +   NI  E TL ++   +   +IFV+T T  T+ L++     + +VK  ++  +  IP+
Sbjct: 284 VSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTLTLDINSTDNIENVKAKIQD-KEGIPT 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQII 208
           +   L   G+QL++ +T++ Y+I +   L ++
Sbjct: 343 DQQRLIFAGKQLEDGRTVSDYNISKESTLHLV 374


>gi|413926506|gb|AFW66438.1| putative ubiquitin family protein, partial [Zea mays]
 gi|413926515|gb|AFW66447.1| ubiquitin2, partial [Zea mays]
          Length = 349

 Score =  147 bits (370), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 109/331 (32%), Positives = 168/331 (50%), Gaps = 53/331 (16%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVE-------- 168
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++        
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQKESTLHLV 191

Query: 169 -----SMRI-------------------------------CIPSEDCELFRGGEQLQNLK 192
                 M+I                                IP +   L   G+QL++ +
Sbjct: 192 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 251

Query: 193 TLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAP 250
           TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  P
Sbjct: 252 TLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPP 311

Query: 251 DSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           D QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 312 DQQRLIFAGKQLEDGRTLADYNIQKESTLHL 342



 Score = 94.4 bits (233), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 58/145 (40%), Positives = 88/145 (60%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TLA Y+
Sbjct: 2   QIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F  +QLED R LA Y I  ES ++L
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHL 145



 Score = 92.0 bits (227), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 74/257 (28%), Positives = 124/257 (48%), Gaps = 53/257 (20%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---- 56
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148

Query: 57  -----------------------NDS---------------------GVMKLYFKTPSNE 72
                                  +D+                     G M+++ KT +  
Sbjct: 149 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQKESTLHLVLRLRGGMQIFVKTLTG- 207

Query: 73  KTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMI 132
           KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   NI  E TL ++
Sbjct: 208 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 267

Query: 133 SVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNL 191
              +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ 
Sbjct: 268 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQRLIFAGKQLEDG 326

Query: 192 KTLAYYDIKENEVLQII 208
           +TLA Y+I++   L ++
Sbjct: 327 RTLADYNIQKESTLHLV 343


>gi|2654141|gb|AAB87694.1| polyubiquitin [Amoeba proteus]
          Length = 382

 Score =  147 bits (370), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 97/287 (33%), Positives = 165/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+  + I+ +K +I  K  E I  D   L +AG+QLE+G ++ DY I   S +H    
Sbjct: 15  LEVEPGDSIDNVKQKIQDK--EGIPPDQQRLIFAGKQLEDGRSLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+    D+I+N+K  I+ +EGIP  +  + + GK +E   +
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPGDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRS 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV    ++ +VK+ ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPGDSIDNVKQKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++  +L+ Y+I++   L ++  ++    IF+K L G+ I LEV   D+
Sbjct: 191 DGQGLIFAGKQLEDGGSLSDYNIQKESTLHLVLRLRGGMQIFIKTLTGKTITLEVEPGDS 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK+K+  + G  PD QRL+F  +QLED R+L+ Y I  ES ++L
Sbjct: 251 IDNVKEKIQDKEGIPPDQQRLIFAGKQLEDGRSLSDYNIQKESTLHL 297



 Score =  147 bits (370), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 97/287 (33%), Positives = 164/287 (57%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+  + I+ +K +I  K  E I  D   L +AG+QLE+G ++ DY I   S +H    
Sbjct: 91  LEVEPGDSIDNVKQKIQDK--EGIPPDQQRLIFAGKQLEDGRSLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+    D+I+N+K  I+ +EGIP     + + GK +E   +
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEPGDSIDNVKQKIQDKEGIPPDGQGLIFAGKQLEDGGS 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IF++T T  T+ LEV    ++ +VK+ ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFIKTLTGKTITLEVEPGDSIDNVKEKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ ++L+ Y+I++   L ++  ++    IFVK L G+ I LEV   D+
Sbjct: 267 DQQRLIFAGKQLEDGRSLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPGDS 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R+L+ Y I  ES ++L
Sbjct: 327 IDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRSLSDYNIQKESTLHL 373



 Score =  118 bits (295), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 75/223 (33%), Positives = 129/223 (57%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+    D+I+N+K  I+ +EGIP  +  + + GK +E   +L   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPGDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRSLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV    ++ +VK+ ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPGDSIDNVKQKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ ++L+ Y+I++   L ++  ++    IFVK L G+ I LEV   D++ +V
Sbjct: 119 LIFAGKQLEDGRSLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPGDSIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD Q L+F  +QLED  +L+ Y I  ES ++L
Sbjct: 179 KQKIQDKEGIPPDGQGLIFAGKQLEDGGSLSDYNIQKESTLHL 221



 Score = 95.1 bits (235), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 66/218 (30%), Positives = 121/218 (55%), Gaps = 8/218 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+  + I+ +K +I  K  E I  D   L +AG+QLE+G ++ DY I   S +H    
Sbjct: 167 LEVEPGDSIDNVKQKIQDK--EGIPPDGQGLIFAGKQLEDGGSLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+    D+I+N+K  I+ +EGIP  +  + + GK +E   +
Sbjct: 225 LRGGMQIFIKTLTG-KTITLEVEPGDSIDNVKEKIQDKEGIPPDQQRLIFAGKQLEDGRS 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV    ++ +VK+ ++  +  IP 
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPGDSIDNVKQKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
           +   L   G+QL++ ++L+ Y+I++   L ++  ++  
Sbjct: 343 DQQRLIFAGKQLEDGRSLSDYNIQKESTLHLVLRLRGG 380


>gi|110736490|dbj|BAF00213.1| polyubiquitin 4 UBQ4 [Arabidopsis thaliana]
          Length = 351

 Score =  146 bits (369), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 109/331 (32%), Positives = 168/331 (50%), Gaps = 53/331 (16%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVE-------- 168
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++        
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQKESTLHLV 191

Query: 169 -----SMRI-------------------------------CIPSEDCELFRGGEQLQNLK 192
                 M+I                                IP +   L   G+QL++ +
Sbjct: 192 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 251

Query: 193 TLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAP 250
           TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  P
Sbjct: 252 TLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPP 311

Query: 251 DSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           D QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 312 DQQRLIFAGKQLEDGRTLADYNIQKESTLHL 342



 Score = 94.4 bits (233), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 58/145 (40%), Positives = 88/145 (60%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TLA Y+
Sbjct: 2   QIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F  +QLED R LA Y I  ES ++L
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHL 145



 Score = 94.0 bits (232), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 75/265 (28%), Positives = 127/265 (47%), Gaps = 53/265 (20%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---- 56
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148

Query: 57  -----------------------NDS---------------------GVMKLYFKTPSNE 72
                                  +D+                     G M+++ KT +  
Sbjct: 149 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQKESTLHLVLRLRGGMQIFVKTLTG- 207

Query: 73  KTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMI 132
           KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   NI  E TL ++
Sbjct: 208 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 267

Query: 133 SVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNL 191
              +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ 
Sbjct: 268 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQRLIFAGKQLEDG 326

Query: 192 KTLAYYDIKENEVLQIIRHVKHSIF 216
           +TLA Y+I++   L ++  ++   F
Sbjct: 327 RTLADYNIQKESTLHLVLRLRGGSF 351


>gi|336372502|gb|EGO00841.1| hypothetical protein SERLA73DRAFT_121253 [Serpula lacrymans var.
           lacrymans S7.3]
          Length = 371

 Score =  146 bits (369), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 102/287 (35%), Positives = 162/287 (56%), Gaps = 20/287 (6%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +      G+ +  Y  
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQH----GRTLSDY-- 125

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
               NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 126 ----NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 180

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 181 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 240

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 241 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 287



 Score =  140 bits (352), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 91/249 (36%), Positives = 143/249 (57%), Gaps = 8/249 (3%)

Query: 39  ENGLTVIDYGIPNNSVIH---NDSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVR 95
           ++G T+ DY I   S +H      G M+++ KT +  KT  L+   SDTI+N+K  I+ +
Sbjct: 117 QHGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDK 175

Query: 96  EGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEV 154
           EGIP  +  + + GK +E   TL   NI  E TL ++   +   +IFV+T T  T+ LEV
Sbjct: 176 EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEV 235

Query: 155 RRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
             + T+ +VK  ++  +  IP +   L   G+QL++ +TL+ Y+I++   L ++  ++  
Sbjct: 236 ESSDTIDNVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 294

Query: 215 --IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYK 272
             IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+F  +QLED R L+ Y 
Sbjct: 295 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 354

Query: 273 IVNESIVNL 281
           I  ES ++L
Sbjct: 355 IQKESTLHL 363



 Score =  119 bits (299), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 79/223 (35%), Positives = 124/223 (55%), Gaps = 15/223 (6%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++      P +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ--- 116

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
                   Q+ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 117 --------QHGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 168

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 169 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 211



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 72/212 (33%), Positives = 121/212 (57%), Gaps = 8/212 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 157 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 214

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 215 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 273

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 274 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 332

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQII 208
           +   L   G+QL++ +TL+ Y+I++   L ++
Sbjct: 333 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 364


>gi|330797961|ref|XP_003287025.1| ubiquitin [Dictyostelium purpureum]
 gi|325082988|gb|EGC36453.1| ubiquitin [Dictyostelium purpureum]
          Length = 365

 Score =  145 bits (366), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 103/287 (35%), Positives = 157/287 (54%), Gaps = 26/287 (9%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEGSDTIENVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++        
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDTIENVKTKIQD-----KE 262

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           ED             +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 263 EDG------------RTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDT 310

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 311 IENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 357



 Score =  134 bits (337), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 98/287 (34%), Positives = 156/287 (54%), Gaps = 26/287 (9%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEGSDTIENVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDTIENVKTKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+                + + ED R L+ Y I  ES ++L
Sbjct: 251 IENVKTKI----------------QDKEEDGRTLSDYNIQKESTLHL 281



 Score =  132 bits (333), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDTIENVKTKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score = 86.7 bits (213), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 69/219 (31%), Positives = 115/219 (52%), Gaps = 24/219 (10%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVEGSDTIENVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +E                E   T
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVEGSDTIENVKTKIQDKE----------------EDGRT 267

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 268 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDTIENVKTKIQD-KEGIPP 326

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSI 215
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  +
Sbjct: 327 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGL 365


>gi|402483942|gb|AFQ60003.1| polyubiquitin, partial [Solen grandis]
          Length = 275

 Score =  145 bits (366), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 97/275 (35%), Positives = 157/275 (57%), Gaps = 10/275 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 5   LEVEASDSIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 62

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SD+IEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 63  LRGGMQIFVKTLTG-KTITLEVEASDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 121

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + ++ +VK  ++  +  IP 
Sbjct: 122 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDSIENVKAKIQD-KEGIPP 180

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+ L++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   D+
Sbjct: 181 DQQRLIFAGKHLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDS 240

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLA 269
           + +VK K+  +    PD QRL+F  +QLED R L+
Sbjct: 241 IENVKAKIQDKESIPPDQQRLIFAGKQLEDGRTLS 275



 Score =  124 bits (310), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 77/212 (36%), Positives = 123/212 (58%), Gaps = 4/212 (1%)

Query: 73  KTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMI 132
           KT  L+   SD+IEN+K  I+ +EGIP  +  + + GK +E   TL   NI  E TL ++
Sbjct: 1   KTITLEVEASDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 60

Query: 133 SVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNL 191
              +   +IFV+T T  T+ LEV  + ++ +VK  ++  +  IP +   L   G+QL++ 
Sbjct: 61  LRLRGGMQIFVKTLTGKTITLEVEASDSIENVKAKIQD-KEGIPPDQQRLIFAGKQLEDG 119

Query: 192 KTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQA 249
           +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   D++ +VK K+  + G  
Sbjct: 120 RTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDSIENVKAKIQDKEGIP 179

Query: 250 PDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           PD QRL+F  + LED R L+ Y I  ES ++L
Sbjct: 180 PDQQRLIFAGKHLEDGRTLSDYNIQKESTLHL 211


>gi|226499354|ref|NP_001147027.1| polyubiquitin containing 7 ubiquitin monomers [Zea mays]
 gi|195606596|gb|ACG25128.1| polyubiquitin containing 7 ubiquitin monomers [Zea mays]
          Length = 311

 Score =  145 bits (366), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 102/293 (34%), Positives = 161/293 (54%), Gaps = 16/293 (5%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIHNDS- 59
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G  +I      N+       
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRNLIFSPFARNAHTARSPI 72

Query: 60  --------GVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKL 111
                     M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK 
Sbjct: 73  SDPRSPRRSKMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQ 131

Query: 112 IESYITLDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESM 170
           +E   TL   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  
Sbjct: 132 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD- 190

Query: 171 RICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILE 228
           +  IP +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LE
Sbjct: 191 KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 250

Query: 229 VAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           V   DT+ +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 251 VESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 303



 Score =  119 bits (299), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 83/229 (36%), Positives = 128/229 (55%), Gaps = 11/229 (4%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITL--D 119
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E    L   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRNLIFS 59

Query: 120 VLNINNEDTLQMISVPKELQ----EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICI 174
               N       IS P+  +    +IFV+T T  T+ LEV  + T+ +VK  ++  +  I
Sbjct: 60  PFARNAHTARSPISDPRSPRRSKMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGI 118

Query: 175 PSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKF 232
           P +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   
Sbjct: 119 PPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESS 178

Query: 233 DTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           DT+ +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 DTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 227



 Score =  108 bits (269), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 73/212 (34%), Positives = 121/212 (57%), Gaps = 8/212 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 97  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 154

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 155 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 213

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 214 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 272

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQII 208
           +   L   G+QL++ +TLA Y+I++   L ++
Sbjct: 273 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 304


>gi|328864943|gb|EGG13329.1| hypothetical protein DFA_11090 [Dictyostelium fasciculatum]
          Length = 356

 Score =  145 bits (366), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 100/286 (34%), Positives = 152/286 (53%), Gaps = 33/286 (11%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEGSDTIENVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTSTVKLEVRRAHTVLDVKKMVESMRICIPSE 177
           L   NI  E TL ++   +   +IFV+T T                          IP +
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTG-------------------------IPPD 242

Query: 178 DCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTV 235
              L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+
Sbjct: 243 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDTI 302

Query: 236 RDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
            +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 303 ENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 348



 Score =  132 bits (332), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDTIENVKTKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score = 73.6 bits (179), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 46/122 (37%), Positives = 67/122 (54%), Gaps = 4/122 (3%)

Query: 14  LRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---NDSGVMKLYFKTPS 70
           ++I  K    I  D   L +AG+QLE+G T+ DY I   S +H      G M+++ KT +
Sbjct: 229 MQIFVKTLTGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLT 288

Query: 71  NEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQ 130
             KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   NI  E TL 
Sbjct: 289 G-KTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 347

Query: 131 MI 132
           ++
Sbjct: 348 LV 349


>gi|118370598|ref|XP_001018500.1| Ubiquitin family protein [Tetrahymena thermophila]
 gi|89300267|gb|EAR98255.1| Ubiquitin family protein [Tetrahymena thermophila SB210]
          Length = 547

 Score =  145 bits (365), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 98/281 (34%), Positives = 157/281 (55%), Gaps = 10/281 (3%)

Query: 7   EKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---NDSGVMK 63
           + +E +K +I  K  E I  D   L +AG+QL++G TV DY I   S +H      G M+
Sbjct: 173 DTVENVKAKIQDK--EGIPPDQQRLIFAGKQLDDGRTVQDYNIQKESTLHLVLRLRGGMQ 230

Query: 64  LYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNI 123
           ++ KT +  KT  L    SDTIENIK  I+ +EGIP  +  + + GK ++   TL   NI
Sbjct: 231 IFVKTLTG-KTVTLDFEASDTIENIKAKIQDKEGIPPDQQRLIFAGKQLDDSRTLSDYNI 289

Query: 124 NNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELF 182
             E TL ++   +   +IFV+T T  TV L+   + T+ ++K  ++  +  IP +   L 
Sbjct: 290 QKESTLHLVLRLRGGMQIFVKTLTGKTVTLDFEASDTIENIKAKIQD-KEGIPPDQQRLI 348

Query: 183 RGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKD 240
             G+QL + +T+  Y+I++   L ++  ++    IFVK L G+ + L++   DTV +VK 
Sbjct: 349 FAGKQLDDGRTVQDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTVTLDLEPCDTVENVKA 408

Query: 241 KLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K+  + G  PD QRL+F  +QL+D R ++ Y I  ES ++L
Sbjct: 409 KIQDKEGIPPDQQRLIFAGKQLDDSRTISDYNIQKESTLHL 449



 Score =  142 bits (357), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 99/282 (35%), Positives = 157/282 (55%), Gaps = 10/282 (3%)

Query: 6   TEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---NDSGVM 62
           ++ IE +K +I  K  E I  D   L +AG+QL++  T+ DY I   S +H      G M
Sbjct: 248 SDTIENIKAKIQDK--EGIPPDQQRLIFAGKQLDDSRTLSDYNIQKESTLHLVLRLRGGM 305

Query: 63  KLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLN 122
           +++ KT +  KT  L    SDTIENIK  I+ +EGIP  +  + + GK ++   T+   N
Sbjct: 306 QIFVKTLTG-KTVTLDFEASDTIENIKAKIQDKEGIPPDQQRLIFAGKQLDDGRTVQDYN 364

Query: 123 INNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCEL 181
           I  E TL ++   +   +IFV+T T  TV L++    TV +VK  ++  +  IP +   L
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLTGKTVTLDLEPCDTVENVKAKIQD-KEGIPPDQQRL 423

Query: 182 FRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVK 239
              G+QL + +T++ Y+I++   L ++  ++    IFVK L G+ I L++   DT+ +VK
Sbjct: 424 IFAGKQLDDSRTISDYNIQKESTLHLVLRLRGGLQIFVKTLTGKTITLDLEASDTIENVK 483

Query: 240 DKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
            K+  + G  PD QRL+F  + LED R L+ Y I  ES ++L
Sbjct: 484 SKIQDKEGIPPDQQRLIFSGKCLEDFRTLSDYNIQKESTLHL 525



 Score =  141 bits (355), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 98/282 (34%), Positives = 156/282 (55%), Gaps = 10/282 (3%)

Query: 6   TEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---NDSGVM 62
           ++ IE +K +I  K  E I  D   L +AG+QL++  T+ DY I   S +H      G M
Sbjct: 20  SDTIEDVKAKIQDK--EGIPPDQQRLIFAGKQLDDSRTLSDYNIQKESTLHLVLRLRGGM 77

Query: 63  KLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLN 122
           +++ KT +  KT  L    SDTIENIK  I+ +EGIP  +  + + GK ++   TL   N
Sbjct: 78  QIFVKTLTG-KTVTLDFEASDTIENIKAKIQDKEGIPPDQQRLIFAGKQLDDGRTLQDYN 136

Query: 123 INNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCEL 181
           I  E TL ++   +   +IFV+T T  TV L++    TV +VK  ++  +  IP +   L
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLTGKTVTLDLEPFDTVENVKAKIQD-KEGIPPDQQRL 195

Query: 182 FRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVK 239
              G+QL + +T+  Y+I++   L ++  ++    IFVK L G+ + L+    DT+ ++K
Sbjct: 196 IFAGKQLDDGRTVQDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTVTLDFEASDTIENIK 255

Query: 240 DKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
            K+  + G  PD QRL+F  +QL+D R L+ Y I  ES ++L
Sbjct: 256 AKIQDKEGIPPDQQRLIFAGKQLDDSRTLSDYNIQKESTLHL 297



 Score =  139 bits (349), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 93/282 (32%), Positives = 156/282 (55%), Gaps = 10/282 (3%)

Query: 6   TEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---NDSGVM 62
           ++ IE +K +I  K  E I  D   L +AG+QL++G T+ DY I   S +H      G M
Sbjct: 96  SDTIENIKAKIQDK--EGIPPDQQRLIFAGKQLDDGRTLQDYNIQKESTLHLVLRLRGGM 153

Query: 63  KLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLN 122
           +++ KT +  KT  L     DT+EN+K  I+ +EGIP  +  + + GK ++   T+   N
Sbjct: 154 QIFVKTLTG-KTVTLDLEPFDTVENVKAKIQDKEGIPPDQQRLIFAGKQLDDGRTVQDYN 212

Query: 123 INNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCEL 181
           I  E TL ++   +   +IFV+T T  TV L+   + T+ ++K  ++  +  IP +   L
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLTGKTVTLDFEASDTIENIKAKIQD-KEGIPPDQQRL 271

Query: 182 FRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVK 239
              G+QL + +TL+ Y+I++   L ++  ++    IFVK L G+ + L+    DT+ ++K
Sbjct: 272 IFAGKQLDDSRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTVTLDFEASDTIENIK 331

Query: 240 DKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
            K+  + G  PD QRL+F  +QL+D R +  Y I  ES ++L
Sbjct: 332 AKIQDKEGIPPDQQRLIFAGKQLDDGRTVQDYNIQKESTLHL 373



 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 77/223 (34%), Positives = 127/223 (56%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L    SDTIE++K  I+ +EGIP  +  + + GK ++   TL   
Sbjct: 1   MQIFVKTLTG-KTITLDFEVSDTIEDVKAKIQDKEGIPPDQQRLIFAGKQLDDSRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  TV L+   + T+ ++K  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTVTLDFEASDTIENIKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL + +TL  Y+I++   L ++  ++    IFVK L G+ + L++  FDTV +V
Sbjct: 119 LIFAGKQLDDGRTLQDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTVTLDLEPFDTVENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QL+D R +  Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLDDGRTVQDYNIQKESTLHL 221



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 66/211 (31%), Positives = 116/211 (54%), Gaps = 8/211 (3%)

Query: 6   TEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---NDSGVM 62
           ++ IE +K +I  K  E I  D   L +AG+QL++G TV DY I   S +H      G M
Sbjct: 324 SDTIENIKAKIQDK--EGIPPDQQRLIFAGKQLDDGRTVQDYNIQKESTLHLVLRLRGGM 381

Query: 63  KLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLN 122
           +++ KT +  KT  L     DT+EN+K  I+ +EGIP  +  + + GK ++   T+   N
Sbjct: 382 QIFVKTLTG-KTVTLDLEPCDTVENVKAKIQDKEGIPPDQQRLIFAGKQLDDSRTISDYN 440

Query: 123 INNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCEL 181
           I  E TL ++   +   +IFV+T T  T+ L++  + T+ +VK  ++  +  IP +   L
Sbjct: 441 IQKESTLHLVLRLRGGLQIFVKTLTGKTITLDLEASDTIENVKSKIQD-KEGIPPDQQRL 499

Query: 182 FRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
              G+ L++ +TL+ Y+I++   L ++  ++
Sbjct: 500 IFSGKCLEDFRTLSDYNIQKESTLHLVLRLR 530



 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 46/135 (34%), Positives = 74/135 (54%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + ++  + +E +K +I  K  E I  D   L +AG+QL++  T+ DY I   S +H    
Sbjct: 395 LDLEPCDTVENVKAKIQDK--EGIPPDQQRLIFAGKQLDDSRTISDYNIQKESTLHLVLR 452

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G ++++ KT +  KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E + T
Sbjct: 453 LRGGLQIFVKTLTG-KTITLDLEASDTIENVKSKIQDKEGIPPDQQRLIFSGKCLEDFRT 511

Query: 118 LDVLNINNEDTLQMI 132
           L   NI  E TL ++
Sbjct: 512 LSDYNIQKESTLHLV 526


>gi|92790166|emb|CAI83752.1| Polyubiqutin 1 [Eudiplodinium maggii]
          Length = 259

 Score =  145 bits (365), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 95/253 (37%), Positives = 146/253 (57%), Gaps = 8/253 (3%)

Query: 35  GQQLENGLTVIDYGIPNNSVIH---NDSGVMKLYFKTPSNEKTFELKANRSDTIENIKFI 91
           G+QLE+  T+ DY I   S +H      G M+++ KT +  KT  L    SDTIEN+K  
Sbjct: 1   GKQLEDNRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG-KTITLDVEPSDTIENVKAK 59

Query: 92  IEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEIFVQTPTS-TV 150
           I+ +EGIP  +  + + GK +E   TL   NI  E TL ++   +   +IFV+T T  T+
Sbjct: 60  IQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTI 119

Query: 151 KLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRH 210
            L+V  + T+ +VK  ++  +  IP +   L   G+QL++ +TLA Y+I++   L ++  
Sbjct: 120 TLDVEPSDTIENVKAKIQD-KEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLR 178

Query: 211 VKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNL 268
           ++    IFVK L G+ I L+V   DT+ +VK K+  + G  PD QRL+F  +QLED+R L
Sbjct: 179 LRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTL 238

Query: 269 ASYKIVNESIVNL 281
           A Y I  ES ++L
Sbjct: 239 ADYNIQKESTLHL 251



 Score =  103 bits (257), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 73/216 (33%), Positives = 120/216 (55%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ IE +K +I  K  E I  D   L +AG+QLE+  T+ DY I   S +H    
Sbjct: 45  LDVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLR 102

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 103 LRGGMQIFVKTLTG-KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRT 161

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP 
Sbjct: 162 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQD-KEGIPP 220

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TLA Y+I++   L ++  ++
Sbjct: 221 DQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLRLR 256


>gi|24640094|ref|NP_572306.1| CG11700 [Drosophila melanogaster]
 gi|7290696|gb|AAF46143.1| CG11700 [Drosophila melanogaster]
          Length = 301

 Score =  144 bits (363), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 100/286 (34%), Positives = 161/286 (56%), Gaps = 10/286 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  EE   +   L + G+ LENG T+ DY I   S I+    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EENPPEHQRLIFGGKHLENGRTLSDYNIQKESTIYLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +E  P     + +GGK +E+  T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEENPPEHQRLIFGGKHLENGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E T+ ++   +   +IFV+T T  T+ LEV  + ++ +VK  +   +  IP 
Sbjct: 132 LSDYNIQKESTIYLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKARIHD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVN 280
           ++ VK ++  + G  PD QRL+F  +QLED R L+ Y I  ES ++
Sbjct: 251 IKHVKARIHDKDGIPPDHQRLIFAGKQLEDGRTLSDYNIQKESTLH 296



 Score =  121 bits (303), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 80/223 (35%), Positives = 128/223 (57%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +E  P     + +GGK +E+  TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEENPPEHQRLIFGGKHLENGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E T+ ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++      P E   
Sbjct: 60  NIQKESTIYLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEEN-PPEHQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L  GG+ L+N +TL+ Y+I++   + ++  ++    IFVK L G+ I LEV   D++ +V
Sbjct: 119 LIFGGKHLENGRTLSDYNIQKESTIYLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K ++  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KARIHDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score = 41.2 bits (95), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 22/57 (38%), Positives = 36/57 (63%), Gaps = 2/57 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIHN 57
           ++V+ ++ I+ +K RIH K  + I  D   L +AG+QLE+G T+ DY I   S +H+
Sbjct: 243 LEVEPSDTIKHVKARIHDK--DGIPPDHQRLIFAGKQLEDGRTLSDYNIQKESTLHS 297


>gi|578549|emb|CAA80335.1| ubiquitin [Tetrahymena pyriformis]
          Length = 303

 Score =  143 bits (360), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 95/287 (33%), Positives = 160/287 (55%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V  T+ I+ +K +I+ K  E I  D   L +AG+QLE+G TV DY I   S +H    
Sbjct: 15  LDVSSTDNIDTIKQKIYDK--EGIPSDQQRLIFAGKQLEDGRTVSDYNIQKESTVHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L   ++D IENIK  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQVFVKTLTG-KTITLDVAQTDNIENIKAKIQDKEGIPSDQQRLIFAGKQLEDERT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           +   NI  E TL ++   +   ++FV+T T  T+ L++  +  + +VK  ++  +  IP+
Sbjct: 132 VSDYNIQKESTLHLVLRLRGGMQVFVKTLTGKTITLDIDSSDNIENVKAKIQD-KEGIPA 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +T+  Y+I++   L ++  ++    IF+K L G+ I L+V   D 
Sbjct: 191 DQQRLIFAGKQLEDGRTVTDYNIQKESTLHLVLRLRGGMQIFMKTLTGKTITLDVNSADN 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           +  VK ++  + G   D QRL+F  +QLED + ++ Y I  ES +NL
Sbjct: 251 IEKVKAQIQDKEGIPVDQQRLIFAGKQLEDGKTVSDYNISKESTLNL 297



 Score =  108 bits (269), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 69/223 (30%), Positives = 125/223 (56%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L  + +D I+ IK  I  +EGIP  +  + + GK +E   T+   
Sbjct: 1   MQIFVKTLTG-KTVALDVSSTDNIDTIKQKIYDKEGIPSDQQRLIFAGKQLEDGRTVSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E T+ ++   +   ++FV+T T  T+ L+V +   + ++K  ++  +  IPS+   
Sbjct: 60  NIQKESTVHLVLRLRGGMQVFVKTLTGKTITLDVAQTDNIENIKAKIQD-KEGIPSDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +T++ Y+I++   L ++  ++    +FVK L G+ I L++   D + +V
Sbjct: 119 LIFAGKQLEDERTVSDYNIQKESTLHLVLRLRGGMQVFVKTLTGKTITLDIDSSDNIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G   D QRL+F  +QLED R +  Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPADQQRLIFAGKQLEDGRTVTDYNIQKESTLHL 221



 Score =  100 bits (250), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 71/212 (33%), Positives = 115/212 (54%), Gaps = 8/212 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V +T+ IE +K +I  K  E I  D   L +AG+QLE+  TV DY I   S +H    
Sbjct: 91  LDVAQTDNIENIKAKIQDK--EGIPSDQQRLIFAGKQLEDERTVSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L  + SD IEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQVFVKTLTG-KTITLDIDSSDNIENVKAKIQDKEGIPADQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           +   NI  E TL ++   +   +IF++T T  T+ L+V  A  +  VK  ++  +  IP 
Sbjct: 208 VTDYNIQKESTLHLVLRLRGGMQIFMKTLTGKTITLDVNSADNIEKVKAQIQD-KEGIPV 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQII 208
           +   L   G+QL++ KT++ Y+I +   L ++
Sbjct: 267 DQQRLIFAGKQLEDGKTVSDYNISKESTLNLV 298


>gi|1101011|gb|AAC46935.1| polyubiquitin, partial [Trichomonas vaginalis]
          Length = 770

 Score =  143 bits (360), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 99/287 (34%), Positives = 159/287 (55%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ T++IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I  +S +H    
Sbjct: 24  LEVEPTDRIEDVKAKIQDK--EGIPPDQQRLIFAGKQLEDGNTLQDYSIQKDSTLHLVLR 81

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  K   L+   +D IE++K  I+ +EGIP  +  + + GK +E   T
Sbjct: 82  LRGGMQIFVKTLTG-KHITLEVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGKQLEDGNT 140

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTST-VKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   +I  + TL ++   +   +IFV+T T   + LEV     + DVK  ++  +  IP 
Sbjct: 141 LQDYSIQKDSTLHLVLRLRGGMQIFVKTLTGKHITLEVEPTDRIEDVKAKIQD-KEGIPP 199

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++  TL  Y I+++  L ++  ++    IFVK L G++I LEV   D 
Sbjct: 200 DQQRLIFAGKQLEDGNTLQDYSIQKDSTLHLVLRLRGGMQIFVKTLTGKHITLEVEPTDR 259

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + DVK K+  + G  PD QRL+F  +QLED   L  Y I  +S ++L
Sbjct: 260 IEDVKAKIQDKEGIPPDQQRLIFAGKQLEDGNTLQDYSIQKDSTLHL 306



 Score =  143 bits (360), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 99/287 (34%), Positives = 159/287 (55%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ T++IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I  +S +H    
Sbjct: 100 LEVEPTDRIEDVKAKIQDK--EGIPPDQQRLIFAGKQLEDGNTLQDYSIQKDSTLHLVLR 157

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  K   L+   +D IE++K  I+ +EGIP  +  + + GK +E   T
Sbjct: 158 LRGGMQIFVKTLTG-KHITLEVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGKQLEDGNT 216

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTST-VKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   +I  + TL ++   +   +IFV+T T   + LEV     + DVK  ++  +  IP 
Sbjct: 217 LQDYSIQKDSTLHLVLRLRGGMQIFVKTLTGKHITLEVEPTDRIEDVKAKIQD-KEGIPP 275

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++  TL  Y I+++  L ++  ++    IFVK L G++I LEV   D 
Sbjct: 276 DQQRLIFAGKQLEDGNTLQDYSIQKDSTLHLVLRLRGGMQIFVKTLTGKHITLEVEPTDR 335

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + DVK K+  + G  PD QRL+F  +QLED   L  Y I  +S ++L
Sbjct: 336 IEDVKAKIQDKEGIPPDQQRLIFAGKQLEDGNTLQDYSIQKDSTLHL 382



 Score =  143 bits (360), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 99/287 (34%), Positives = 159/287 (55%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ T++IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I  +S +H    
Sbjct: 176 LEVEPTDRIEDVKAKIQDK--EGIPPDQQRLIFAGKQLEDGNTLQDYSIQKDSTLHLVLR 233

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  K   L+   +D IE++K  I+ +EGIP  +  + + GK +E   T
Sbjct: 234 LRGGMQIFVKTLTG-KHITLEVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGKQLEDGNT 292

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTST-VKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   +I  + TL ++   +   +IFV+T T   + LEV     + DVK  ++  +  IP 
Sbjct: 293 LQDYSIQKDSTLHLVLRLRGGMQIFVKTLTGKHITLEVEPTDRIEDVKAKIQD-KEGIPP 351

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++  TL  Y I+++  L ++  ++    IFVK L G++I LEV   D 
Sbjct: 352 DQQRLIFAGKQLEDGNTLQDYSIQKDSTLHLVLRLRGGMQIFVKTLTGKHITLEVEPTDR 411

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + DVK K+  + G  PD QRL+F  +QLED   L  Y I  +S ++L
Sbjct: 412 IEDVKAKIQDKEGIPPDQQRLIFAGKQLEDGNTLQDYSIQKDSTLHL 458



 Score =  143 bits (360), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 99/287 (34%), Positives = 159/287 (55%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ T++IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I  +S +H    
Sbjct: 252 LEVEPTDRIEDVKAKIQDK--EGIPPDQQRLIFAGKQLEDGNTLQDYSIQKDSTLHLVLR 309

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  K   L+   +D IE++K  I+ +EGIP  +  + + GK +E   T
Sbjct: 310 LRGGMQIFVKTLTG-KHITLEVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGKQLEDGNT 368

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTST-VKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   +I  + TL ++   +   +IFV+T T   + LEV     + DVK  ++  +  IP 
Sbjct: 369 LQDYSIQKDSTLHLVLRLRGGMQIFVKTLTGKHITLEVEPTDRIEDVKAKIQD-KEGIPP 427

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++  TL  Y I+++  L ++  ++    IFVK L G++I LEV   D 
Sbjct: 428 DQQRLIFAGKQLEDGNTLQDYSIQKDSTLHLVLRLRGGMQIFVKTLTGKHITLEVEPTDR 487

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + DVK K+  + G  PD QRL+F  +QLED   L  Y I  +S ++L
Sbjct: 488 IEDVKAKIQDKEGIPPDQQRLIFAGKQLEDGNTLQDYSIQKDSTLHL 534



 Score =  143 bits (360), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 99/287 (34%), Positives = 159/287 (55%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ T++IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I  +S +H    
Sbjct: 328 LEVEPTDRIEDVKAKIQDK--EGIPPDQQRLIFAGKQLEDGNTLQDYSIQKDSTLHLVLR 385

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  K   L+   +D IE++K  I+ +EGIP  +  + + GK +E   T
Sbjct: 386 LRGGMQIFVKTLTG-KHITLEVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGKQLEDGNT 444

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTST-VKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   +I  + TL ++   +   +IFV+T T   + LEV     + DVK  ++  +  IP 
Sbjct: 445 LQDYSIQKDSTLHLVLRLRGGMQIFVKTLTGKHITLEVEPTDRIEDVKAKIQD-KEGIPP 503

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++  TL  Y I+++  L ++  ++    IFVK L G++I LEV   D 
Sbjct: 504 DQQRLIFAGKQLEDGNTLQDYSIQKDSTLHLVLRLRGGMQIFVKTLTGKHITLEVEPTDR 563

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + DVK K+  + G  PD QRL+F  +QLED   L  Y I  +S ++L
Sbjct: 564 IEDVKAKIQDKEGIPPDQQRLIFAGKQLEDGNTLQDYSIQKDSTLHL 610



 Score =  143 bits (360), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 99/287 (34%), Positives = 159/287 (55%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ T++IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I  +S +H    
Sbjct: 404 LEVEPTDRIEDVKAKIQDK--EGIPPDQQRLIFAGKQLEDGNTLQDYSIQKDSTLHLVLR 461

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  K   L+   +D IE++K  I+ +EGIP  +  + + GK +E   T
Sbjct: 462 LRGGMQIFVKTLTG-KHITLEVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGKQLEDGNT 520

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTST-VKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   +I  + TL ++   +   +IFV+T T   + LEV     + DVK  ++  +  IP 
Sbjct: 521 LQDYSIQKDSTLHLVLRLRGGMQIFVKTLTGKHITLEVEPTDRIEDVKAKIQD-KEGIPP 579

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++  TL  Y I+++  L ++  ++    IFVK L G++I LEV   D 
Sbjct: 580 DQQRLIFAGKQLEDGNTLQDYSIQKDSTLHLVLRLRGGMQIFVKTLTGKHITLEVEPTDR 639

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + DVK K+  + G  PD QRL+F  +QLED   L  Y I  +S ++L
Sbjct: 640 IEDVKAKIQDKEGIPPDQQRLIFAGKQLEDGNTLQDYSIQKDSTLHL 686



 Score =  140 bits (354), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 98/287 (34%), Positives = 159/287 (55%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ T++IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I  +S +H    
Sbjct: 480 LEVEPTDRIEDVKAKIQDK--EGIPPDQQRLIFAGKQLEDGNTLQDYSIQKDSTLHLVLR 537

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  K   L+   +D IE++K  I+ +EGIP  +  + + GK +E   T
Sbjct: 538 LRGGMQIFVKTLTG-KHITLEVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGKQLEDGNT 596

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTST-VKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   +I  + TL ++   +   +IFV+T T   + LEV     + DVK  ++  +  IP 
Sbjct: 597 LQDYSIQKDSTLHLVLRLRGGMQIFVKTLTGKHITLEVEPTDRIEDVKAKIQD-KEGIPP 655

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++  TL  Y I+++  L ++  ++    IFVK L G++I LEV   D 
Sbjct: 656 DQQRLIFAGKQLEDGNTLQDYSIQKDSTLHLVLRLRGGMQIFVKTLTGKHITLEVEPTDR 715

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + DVK K+  + G  PD Q L+F  +QLED + L  Y I  +S ++L
Sbjct: 716 IEDVKAKIQVKEGIPPDQQGLIFAGKQLEDGKTLQDYSIQKDSTLHL 762



 Score =  113 bits (283), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 76/225 (33%), Positives = 123/225 (54%), Gaps = 5/225 (2%)

Query: 60  GVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLD 119
           G M+++ KT +  K   L+   +D IE++K  I+ +EGIP  +  + + GK +E   TL 
Sbjct: 8   GGMQIFVKTLTG-KHITLEVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGKQLEDGNTLQ 66

Query: 120 VLNINNEDTLQMISVPKELQEIFVQTPTST-VKLEVRRAHTVLDVKKMVESMRICIPSED 178
             +I  + TL ++   +   +IFV+T T   + LEV     + DVK  ++  +  IP + 
Sbjct: 67  DYSIQKDSTLHLVLRLRGGMQIFVKTLTGKHITLEVEPTDRIEDVKAKIQD-KEGIPPDQ 125

Query: 179 CELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVR 236
             L   G+QL++  TL  Y I+++  L ++  ++    IFVK L G++I LEV   D + 
Sbjct: 126 QRLIFAGKQLEDGNTLQDYSIQKDSTLHLVLRLRGGMQIFVKTLTGKHITLEVEPTDRIE 185

Query: 237 DVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           DVK K+  + G  PD QRL+F  +QLED   L  Y I  +S ++L
Sbjct: 186 DVKAKIQDKEGIPPDQQRLIFAGKQLEDGNTLQDYSIQKDSTLHL 230



 Score = 95.9 bits (237), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 69/212 (32%), Positives = 118/212 (55%), Gaps = 8/212 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ T++IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I  +S +H    
Sbjct: 556 LEVEPTDRIEDVKAKIQDK--EGIPPDQQRLIFAGKQLEDGNTLQDYSIQKDSTLHLVLR 613

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  K   L+   +D IE++K  I+ +EGIP  +  + + GK +E   T
Sbjct: 614 LRGGMQIFVKTLTG-KHITLEVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGKQLEDGNT 672

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTST-VKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   +I  + TL ++   +   +IFV+T T   + LEV     + DVK  ++ ++  IP 
Sbjct: 673 LQDYSIQKDSTLHLVLRLRGGMQIFVKTLTGKHITLEVEPTDRIEDVKAKIQ-VKEGIPP 731

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQII 208
           +   L   G+QL++ KTL  Y I+++  L ++
Sbjct: 732 DQQGLIFAGKQLEDGKTLQDYSIQKDSTLHLV 763


>gi|578551|emb|CAA80337.1| ubiquitin [Tetrahymena pyriformis]
          Length = 379

 Score =  142 bits (359), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 95/287 (33%), Positives = 161/287 (56%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V  ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVDSSDNIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTISDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G + L+ KT +  KT  L    +DTIE +K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGIYLFVKTLTG-KTITLDVEYNDTIEKVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           +   N+  + TL ++   +   ++F++T T  T+ L+V  +  + +VK  ++  +  IP 
Sbjct: 208 VSDYNLQKDSTLHLVLRLRGGMQVFIKTLTGKTITLDVDSSENIENVKAKIQD-KEGIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +T++ Y+I++   L ++  ++    IFVK L G+ I L+V   D 
Sbjct: 267 DQQRLIFAGKQLEDGRTVSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVNSTDN 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R+L+ Y I  ES ++L
Sbjct: 327 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRSLSDYNISKESTLHL 373



 Score =  140 bits (352), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 94/287 (32%), Positives = 161/287 (56%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V +T+ +E +K +I  K  E I  D   L +AG+QLE+  T+ DY I   S +H    
Sbjct: 15  LDVAQTDSVENIKQKIQDK--EGIPPDQQRLIFAGKQLEDARTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+ + SD IEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVDSSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           +   NI  E TL ++   +    +FV+T T  T+ L+V    T+  VK  ++  +  IP 
Sbjct: 132 ISDYNIQKESTLHLVLRLRGGIYLFVKTLTGKTITLDVEYNDTIEKVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +T++ Y+++++  L ++  ++    +F+K L G+ I L+V   + 
Sbjct: 191 DQQRLIFAGKQLEDGRTVSDYNLQKDSTLHLVLRLRGGMQVFIKTLTGKTITLDVDSSEN 250

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R ++ Y I  ES ++L
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTVSDYNIQKESTLHL 297



 Score =  119 bits (297), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 76/223 (34%), Positives = 129/223 (57%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L   ++D++ENIK  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTVTLDVAQTDSVENIKQKIQDKEGIPPDQQRLIFAGKQLEDARTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  +  + +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVDSSDNIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSI--FVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +T++ Y+I++   L ++  ++  I  FVK L G+ I L+V   DT+  V
Sbjct: 119 LIFAGKQLEDGRTISDYNIQKESTLHLVLRLRGGIYLFVKTLTGKTITLDVEYNDTIEKV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R ++ Y +  +S ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTVSDYNLQKDSTLHL 221



 Score = 99.4 bits (246), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 69/216 (31%), Positives = 119/216 (55%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+  + IEK+K +I  K  E I  D   L +AG+QLE+G TV DY +  +S +H    
Sbjct: 167 LDVEYNDTIEKVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTVSDYNLQKDSTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L  + S+ IEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 225 LRGGMQVFIKTLTG-KTITLDVDSSENIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           +   NI  E TL ++   +   +IFV+T T  T+ L+V     + +VK  ++  +  IP 
Sbjct: 284 VSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVNSTDNIENVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ ++L+ Y+I +   L ++  ++
Sbjct: 343 DQQRLIFAGKQLEDGRSLSDYNISKESTLHLVLRLR 378


>gi|164708|gb|AAA31133.1| poly-ubiquitin precursor, partial [Sus scrofa]
          Length = 255

 Score =  142 bits (358), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 93/249 (37%), Positives = 143/249 (57%), Gaps = 8/249 (3%)

Query: 39  ENGLTVIDYGIPNNSVIH---NDSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVR 95
           E+G T+ DY I   S +H      G M+++ KT +  KT  L+   SDTIEN+K  I+ +
Sbjct: 1   EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDK 59

Query: 96  EGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEV 154
           EGIP  +  + + GK +E   TL   NI  E TL ++   +   +IFV+T T  T+ LEV
Sbjct: 60  EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEV 119

Query: 155 RRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
             + T+ +VK  ++  +  IP +   L   G+QL++ +TL+ Y+I++   L ++  ++  
Sbjct: 120 EPSDTIENVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 178

Query: 215 --IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYK 272
             IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+F  +QLED R L+ Y 
Sbjct: 179 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 238

Query: 273 IVNESIVNL 281
           I  ES ++L
Sbjct: 239 IQKESTLHL 247



 Score =  107 bits (268), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 74/216 (34%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 41  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 98

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 99  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 157

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 158 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 216

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 217 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 252


>gi|327356699|gb|EGE85556.1| hypothetical protein BDDG_08501 [Ajellomyces dermatitidis ATCC
           18188]
          Length = 333

 Score =  142 bits (358), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 105/314 (33%), Positives = 163/314 (51%), Gaps = 36/314 (11%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+  + I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LDVESGDTIDAVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKL------------YFKTPSNE---------------KTFELKANRSDTIENIKF 90
             G M++             F    N+               KT  L+   SDTI+N+K 
Sbjct: 73  LRGGMQICMSFEQVLSYIDMFYVRENQALTYTLQTVVKTLTGKTITLEVESSDTIDNVKS 132

Query: 91  IIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEIFVQTPTS-T 149
            I+ +EGIP  +  + + GK +E   TL   NI  E TL ++   +   +IFV+T T  T
Sbjct: 133 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 192

Query: 150 VKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIR 209
           + LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TL+ Y+I++   L ++ 
Sbjct: 193 ITLEVESSDTIDNVKSKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 251

Query: 210 HVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRN 267
            ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+F  +QLED R 
Sbjct: 252 RLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 311

Query: 268 LASYKIVNESIVNL 281
           L+ Y I  ES ++L
Sbjct: 312 LSDYNIQKESTLHL 325



 Score =  111 bits (277), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 78/251 (31%), Positives = 125/251 (49%), Gaps = 33/251 (13%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L     DTI+ +K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLDVESGDTIDAVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMI-----------------------------SVPKELQEIFVQTPTSTVKL 152
           NI  E TL ++                             ++   LQ +       T+ L
Sbjct: 60  NIQKESTLHLVLRLRGGMQICMSFEQVLSYIDMFYVRENQALTYTLQTVVKTLTGKTITL 119

Query: 153 EVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           EV  + T+ +VK  ++  +  IP +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 120 EVESSDTIDNVKSKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 178

Query: 213 HS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLAS 270
               IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+F  +QLED R L+ 
Sbjct: 179 GGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 238

Query: 271 YKIVNESIVNL 281
           Y I  ES ++L
Sbjct: 239 YNIQKESTLHL 249



 Score =  105 bits (263), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 72/216 (33%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 119 LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 176

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 177 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 235

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 236 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 294

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 295 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 330


>gi|118370604|ref|XP_001018503.1| Ubiquitin family protein [Tetrahymena thermophila]
 gi|89300270|gb|EAR98258.1| Ubiquitin family protein [Tetrahymena thermophila SB210]
          Length = 384

 Score =  142 bits (357), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 94/282 (33%), Positives = 159/282 (56%), Gaps = 10/282 (3%)

Query: 6   TEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---NDSGVM 62
           ++ IE +K +I  K  E I  D   L +AG+QL++G T+ DY I   S +H      G M
Sbjct: 20  SDTIEGIKAKIQDK--EGIPPDQQRLIFAGKQLDDGKTLSDYNIQKESTLHLVLRLRGGM 77

Query: 63  KLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLN 122
           +++ KT +  KT  L     DTIEN+K  I+ +EGIP  +  + + GK ++   T+   N
Sbjct: 78  QIFVKTLTG-KTVTLDLEPCDTIENVKAKIQDKEGIPPDQQRLIFAGKQLDDSKTISDYN 136

Query: 123 INNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCEL 181
           I+ E TL ++   +   +IFV+T T  T+ L++  + T+ +VK  ++  +  IP +   L
Sbjct: 137 ISKESTLHLVLRLRGGMQIFVKTLTGKTITLDLEVSDTIENVKSKIQD-KEGIPPDQQRL 195

Query: 182 FRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVK 239
              G+QL + K L+ Y+I++   L ++  ++    IFVK L G+ + L++   DT+ +VK
Sbjct: 196 IFAGKQLDDGKILSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTVTLDLESCDTIENVK 255

Query: 240 DKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
            K+  + G  PD QRL+F  +QL+D + ++ Y I  ES ++L
Sbjct: 256 AKIQDKEGIPPDQQRLIFAGKQLDDSKTISDYNISKESTLHL 297



 Score =  140 bits (352), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 97/281 (34%), Positives = 153/281 (54%), Gaps = 10/281 (3%)

Query: 7   EKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---NDSGVMK 63
           + IE +K +I  K  E I  D   L +AG+QL++  T+ DY I   S +H      G M+
Sbjct: 97  DTIENVKAKIQDK--EGIPPDQQRLIFAGKQLDDSKTISDYNISKESTLHLVLRLRGGMQ 154

Query: 64  LYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNI 123
           ++ KT +  KT  L    SDTIEN+K  I+ +EGIP  +  + + GK ++    L   NI
Sbjct: 155 IFVKTLTG-KTITLDLEVSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLDDGKILSDYNI 213

Query: 124 NNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELF 182
             E TL ++   +   +IFV+T T  TV L++    T+ +VK  ++  +  IP +   L 
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTVTLDLESCDTIENVKAKIQD-KEGIPPDQQRLI 272

Query: 183 RGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKD 240
             G+QL + KT++ Y+I +   L ++  ++    IFVK L G+ I L++   DT+ +VK 
Sbjct: 273 FAGKQLDDSKTISDYNISKESTLHLVLRLRGGMQIFVKTLTGKTITLDLEASDTIENVKS 332

Query: 241 KLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K+  + G  PD QRL+F  + LED R L+ Y I  E  ++L
Sbjct: 333 KIQDKEGIPPDQQRLIFSGKCLEDTRTLSDYNIQKEQTLHL 373



 Score =  116 bits (290), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 78/223 (34%), Positives = 126/223 (56%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L    SDTIE IK  I+ +EGIP  +  + + GK ++   TL   
Sbjct: 1   MQIFVKTLTR-KTITLGLEVSDTIEGIKAKIQDKEGIPPDQQRLIFAGKQLDDGKTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  TV L++    T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTVTLDLEPCDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL + KT++ Y+I +   L ++  ++    IFVK L G+ I L++   DT+ +V
Sbjct: 119 LIFAGKQLDDSKTISDYNISKESTLHLVLRLRGGMQIFVKTLTGKTITLDLEVSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QL+D + L+ Y I  ES ++L
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLDDGKILSDYNIQKESTLHL 221



 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 65/211 (30%), Positives = 117/211 (55%), Gaps = 8/211 (3%)

Query: 6   TEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---NDSGVM 62
           ++ IE +K +I  K  E I  D   L +AG+QL++G  + DY I   S +H      G M
Sbjct: 172 SDTIENVKSKIQDK--EGIPPDQQRLIFAGKQLDDGKILSDYNIQKESTLHLVLRLRGGM 229

Query: 63  KLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLN 122
           +++ KT +  KT  L     DTIEN+K  I+ +EGIP  +  + + GK ++   T+   N
Sbjct: 230 QIFVKTLTG-KTVTLDLESCDTIENVKAKIQDKEGIPPDQQRLIFAGKQLDDSKTISDYN 288

Query: 123 INNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCEL 181
           I+ E TL ++   +   +IFV+T T  T+ L++  + T+ +VK  ++  +  IP +   L
Sbjct: 289 ISKESTLHLVLRLRGGMQIFVKTLTGKTITLDLEASDTIENVKSKIQD-KEGIPPDQQRL 347

Query: 182 FRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
              G+ L++ +TL+ Y+I++ + L ++  ++
Sbjct: 348 IFSGKCLEDTRTLSDYNIQKEQTLHLVLRLR 378



 Score = 73.6 bits (179), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 48/135 (35%), Positives = 73/135 (54%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + ++  + IE +K +I  K  E I  D   L +AG+QL++  T+ DY I   S +H    
Sbjct: 243 LDLESCDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLDDSKTISDYNISKESTLHLVLR 300

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 301 LRGGMQIFVKTLTG-KTITLDLEASDTIENVKSKIQDKEGIPPDQQRLIFSGKCLEDTRT 359

Query: 118 LDVLNINNEDTLQMI 132
           L   NI  E TL ++
Sbjct: 360 LSDYNIQKEQTLHLV 374


>gi|299470074|emb|CBN79251.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 380

 Score =  141 bits (356), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 102/301 (33%), Positives = 162/301 (53%), Gaps = 24/301 (7%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPN--------- 51
           + V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I           
Sbjct: 76  LDVEPSDTIDGVKQKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKLEDGRTLSD 133

Query: 52  -----NSVIH---NDSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEY 103
                 S +H      G M+++ KT +  KT  L    SDTI+ +K  I+ +EGIP  + 
Sbjct: 134 YNIQKESTLHLVLRLRGGMQIFVKTLTG-KTITLDVEPSDTIDGVKQKIQDKEGIPPDQQ 192

Query: 104 DIYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLD 162
            + + GK +E   TL   NI  E TL ++   +   +IFV+T T  T+ L+V  + T+  
Sbjct: 193 RLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDG 252

Query: 163 VKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLL 220
           VK+ ++  +  IP +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L
Sbjct: 253 VKQKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 311

Query: 221 NGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVN 280
            G+ I L+V   DT+  VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++
Sbjct: 312 TGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 371

Query: 281 L 281
           L
Sbjct: 372 L 372



 Score =  133 bits (334), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 99/298 (33%), Positives = 157/298 (52%), Gaps = 33/298 (11%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIHNDSG 60
           + V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I           
Sbjct: 15  LDVEPSDTIDGVKQKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNI----------- 61

Query: 61  VMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDV 120
             K++ KT +  KT  L    SDTI+ +K  I+ +EGIP  +  + + GK +E   TL  
Sbjct: 62  -QKIFVKTLTG-KTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 119

Query: 121 LNINN--------------EDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKK 165
            NI                E TL ++   +   +IFV+T T  T+ L+V  + T+  VK+
Sbjct: 120 YNIQKLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQ 179

Query: 166 MVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGR 223
            ++  +  IP +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+
Sbjct: 180 KIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK 238

Query: 224 YIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
            I L+V   DT+  VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 239 TITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 296



 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 79/237 (33%), Positives = 124/237 (52%), Gaps = 34/237 (14%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L    SDTI+ +K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI               Q+IFV+T T  T+ L+V  + T+  VK+ ++  +  IP +   
Sbjct: 60  NI---------------QKIFVKTLTGKTITLDVEPSDTIDGVKQKIQD-KEGIPPDQQR 103

Query: 181 LFRGGEQLQNLKTLAYYDIKENE--------------VLQIIRHVKHS--IFVKLLNGRY 224
           L   G+QL++ +TL+ Y+I++ E               L ++  ++    IFVK L G+ 
Sbjct: 104 LIFAGKQLEDGRTLSDYNIQKLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 163

Query: 225 IILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           I L+V   DT+  VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 164 ITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 220



 Score =  100 bits (248), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 70/218 (32%), Positives = 120/218 (55%), Gaps = 8/218 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 166 LDVEPSDTIDGVKQKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 223

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L    SDTI+ +K  I+ +EGIP  +  + + GK +E   T
Sbjct: 224 LRGGMQIFVKTLTG-KTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT 282

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ L+V  + T+  VK+ ++  +  IP 
Sbjct: 283 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQD-KEGIPP 341

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  
Sbjct: 342 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 379


>gi|308809920|ref|XP_003082269.1| polyubiquitin (ISS) [Ostreococcus tauri]
 gi|116060737|emb|CAL57215.1| polyubiquitin (ISS) [Ostreococcus tauri]
          Length = 288

 Score =  141 bits (356), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 93/251 (37%), Positives = 144/251 (57%), Gaps = 8/251 (3%)

Query: 20  VEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---NDSGVMKLYFKTPSNEKTFE 76
            ++ I  D   L +AG+QLE+G T+ DY I   S +H      G M+++ KT +  KT  
Sbjct: 8   TDDGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG-KTIT 66

Query: 77  LKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMISVPK 136
           L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   NI  E TL ++   +
Sbjct: 67  LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 126

Query: 137 ELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLA 195
              +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TLA
Sbjct: 127 GGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLA 185

Query: 196 YYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQ 253
            Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD Q
Sbjct: 186 DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQ 245

Query: 254 RLVFKRQQLED 264
           RL+F  +QLED
Sbjct: 246 RLIFAGKQLED 256



 Score =  111 bits (278), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 71/189 (37%), Positives = 109/189 (57%), Gaps = 4/189 (2%)

Query: 96  EGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEV 154
           +GIP  +  + + GK +E   TL   NI  E TL ++   +   +IFV+T T  T+ LEV
Sbjct: 10  DGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEV 69

Query: 155 RRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
             + T+ +VK  ++  +  IP +   L   G+QL++ +TLA Y+I++   L ++  ++  
Sbjct: 70  ESSDTIDNVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 128

Query: 215 --IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYK 272
             IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+F  +QLED R LA Y 
Sbjct: 129 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 188

Query: 273 IVNESIVNL 281
           I  ES ++L
Sbjct: 189 IQKESTLHL 197



 Score = 42.0 bits (97), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 20/42 (47%), Positives = 26/42 (61%)

Query: 240 DKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           D+   + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 4   DECVTDDGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 45


>gi|118370592|ref|XP_001018497.1| Ubiquitin family protein [Tetrahymena thermophila]
 gi|89300264|gb|EAR98252.1| Ubiquitin family protein [Tetrahymena thermophila SB210]
          Length = 384

 Score =  140 bits (354), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 99/287 (34%), Positives = 157/287 (54%), Gaps = 10/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + ++  + +E +K +I  K  E I  D   L +AG+QL++  T+ DY I   S +H    
Sbjct: 91  LDLEPCDTVENVKAKIQDK--EGIPPDQQRLIFAGKQLDDSRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L    SDTIENIK  I+ +EGIP  +  + + GK ++   T
Sbjct: 149 LRGGMQIFVKTLTG-KTVTLDIEASDTIENIKAKIQDKEGIPPDQQRLIFAGKQLDDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           +   NI  E TL ++   +   +IFV+T T  TV L++    T+ +VK  ++  +  IP 
Sbjct: 208 VQDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTVTLDLDPCDTIENVKAKIQD-KERIPP 266

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL + +TL+ Y+I+    L ++  ++    IFVK L G+ I L+V   DT
Sbjct: 267 DQQRLIFAGKQLDDSRTLSDYNIQRESTLHLVLRLRGGMQIFVKTLTGKTITLDVESSDT 326

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  + LED R L  Y I  ES ++L
Sbjct: 327 IDNVKAKIQDKEGIPPDQQRLIFSGKCLEDTRKLTDYNIQKESTLHL 373



 Score =  138 bits (347), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 92/282 (32%), Positives = 157/282 (55%), Gaps = 10/282 (3%)

Query: 6   TEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---NDSGVM 62
           ++ I+ +K +I  K  E I  D   L +AG+QL++G ++ DY I   S +H      G M
Sbjct: 20  SDSIQDVKAKIQDK--EGIPPDQQRLIFAGKQLDDGRSLSDYNIQKESTLHLVLRLRGGM 77

Query: 63  KLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLN 122
           +++ KT +  KT  L     DT+EN+K  I+ +EGIP  +  + + GK ++   TL   N
Sbjct: 78  QIFVKTLTG-KTVTLDLEPCDTVENVKAKIQDKEGIPPDQQRLIFAGKQLDDSRTLSDYN 136

Query: 123 INNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCEL 181
           I  E TL ++   +   +IFV+T T  TV L++  + T+ ++K  ++  +  IP +   L
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLTGKTVTLDIEASDTIENIKAKIQD-KEGIPPDQQRL 195

Query: 182 FRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVK 239
              G+QL + +T+  Y+I++   L ++  ++    IFVK L G+ + L++   DT+ +VK
Sbjct: 196 IFAGKQLDDGRTVQDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTVTLDLDPCDTIENVK 255

Query: 240 DKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
            K+  +    PD QRL+F  +QL+D R L+ Y I  ES ++L
Sbjct: 256 AKIQDKERIPPDQQRLIFAGKQLDDSRTLSDYNIQRESTLHL 297



 Score =  115 bits (287), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 73/223 (32%), Positives = 127/223 (56%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L    SD+I+++K  I+ +EGIP  +  + + GK ++   +L   
Sbjct: 1   MQIFVKTLTG-KTITLNTEVSDSIQDVKAKIQDKEGIPPDQQRLIFAGKQLDDGRSLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  TV L++    TV +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTVTLDLEPCDTVENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL + +TL+ Y+I++   L ++  ++    IFVK L G+ + L++   DT+ ++
Sbjct: 119 LIFAGKQLDDSRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTVTLDIEASDTIENI 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QL+D R +  Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLDDGRTVQDYNIQKESTLHL 221



 Score = 94.0 bits (232), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 67/216 (31%), Positives = 117/216 (54%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + ++ ++ IE +K +I  K  E I  D   L +AG+QL++G TV DY I   S +H    
Sbjct: 167 LDIEASDTIENIKAKIQDK--EGIPPDQQRLIFAGKQLDDGRTVQDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L  +  DTIEN+K  I+ +E IP  +  + + GK ++   T
Sbjct: 225 LRGGMQIFVKTLTG-KTVTLDLDPCDTIENVKAKIQDKERIPPDQQRLIFAGKQLDDSRT 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP 
Sbjct: 284 LSDYNIQRESTLHLVLRLRGGMQIFVKTLTGKTITLDVESSDTIDNVKAKIQD-KEGIPP 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+ L++ + L  Y+I++   L ++  ++
Sbjct: 343 DQQRLIFSGKCLEDTRKLTDYNIQKESTLHLVLRLR 378


>gi|240254322|ref|NP_176714.4| ubiquitin 13 [Arabidopsis thaliana]
 gi|332196241|gb|AEE34362.1| ubiquitin 13 [Arabidopsis thaliana]
          Length = 319

 Score =  140 bits (353), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 104/301 (34%), Positives = 163/301 (54%), Gaps = 25/301 (8%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 L-ADNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEWIPP 189

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV    T
Sbjct: 190 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSGT 249

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRN--------------LASYKIVNESIVN 280
           + +VK K+  + G  PD QRL+F  +QLE                  LA Y I  ES ++
Sbjct: 250 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEGGPGGGGGHFQKAEALAFLADYNIQKESTLH 309

Query: 281 L 281
           L
Sbjct: 310 L 310



 Score =  122 bits (306), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 129/223 (57%), Gaps = 6/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA  +I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLAD-NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 177

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  +    PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 178 KAKIQDKEWIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 220



 Score = 87.0 bits (214), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 72/234 (30%), Positives = 120/234 (51%), Gaps = 23/234 (9%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ D  I   S +H    
Sbjct: 91  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLAD-NIQKESTLHLVLR 147

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +E IP  +  + + GK +E   T
Sbjct: 148 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEWIPPDQQRLIFAGKQLEDGRT 206

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 207 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSGTIDNVKAKIQD-KEGIPP 265

Query: 177 EDCELFRGGEQLQN--------------LKTLAYYDIKENEVLQIIRHVKHSIF 216
           +   L   G+QL+               L  LA Y+I++   L ++  ++   F
Sbjct: 266 DQQRLIFAGKQLEGGPGGGGGHFQKAEALAFLADYNIQKESTLHLVLRLRGGSF 319


>gi|7439572|pir||T02358 ubiquitin homolog T8F5.13 - Arabidopsis thaliana
 gi|3335355|gb|AAC27157.1| Match to polyubiquitin DNA gb|L05401 from A. thaliana. Contains
           insertion of mitochondrial NADH dehydrogenase gb|X82618
           and gb|X98301. May be a pseudogene with an expressed
           insert. EST gb|AA586248 comes from this region
           [Arabidopsis thaliana]
          Length = 324

 Score =  140 bits (352), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 97/269 (36%), Positives = 154/269 (57%), Gaps = 11/269 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 L-ADNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEWIPP 189

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV    T
Sbjct: 190 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSGT 249

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLE 263
           + +VK K+  + G  PD QRL+F  +QLE
Sbjct: 250 IDNVKAKIQDKEGIPPDQQRLIFAGKQLE 278



 Score =  122 bits (306), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 129/223 (57%), Gaps = 6/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA  +I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLAD-NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 177

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  +    PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 178 KAKIQDKEWIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 220



 Score = 85.5 bits (210), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 72/239 (30%), Positives = 120/239 (50%), Gaps = 28/239 (11%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ D  I   S +H    
Sbjct: 91  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLAD-NIQKESTLHLVLR 147

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +E IP  +  + + GK +E   T
Sbjct: 148 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEWIPPDQQRLIFAGKQLEDGRT 206

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 207 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSGTIDNVKAKIQD-KEGIPP 265

Query: 177 EDCELFRGGEQLQN-------------------LKTLAYYDIKENEVLQIIRHVKHSIF 216
           +   L   G+QL+                    L  LA Y+I++   L ++  ++   F
Sbjct: 266 DQQRLIFAGKQLEGGPGGGGGSRASRHFQKAEALAFLADYNIQKESTLHLVLRLRGGSF 324


>gi|19698785|gb|AAL91103.1| ubiquitin [Acanthocheilonema viteae]
          Length = 258

 Score =  139 bits (350), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 91/245 (37%), Positives = 140/245 (57%), Gaps = 8/245 (3%)

Query: 43  TVIDYGIPNNSVIH---NDSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIP 99
           T+ DY I   S +H      G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP
Sbjct: 8   TLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIP 66

Query: 100 VHEYDIYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAH 158
             +  + + GK +E   TL   NI  E TL ++   +   +IFV+T T  T+ LEV  + 
Sbjct: 67  PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASD 126

Query: 159 TVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IF 216
           T+ +VK  ++  +  IP +   L   G+QL++ +TL+ Y+I++   L ++  ++    IF
Sbjct: 127 TIENVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIF 185

Query: 217 VKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNE 276
           VK L G+ I LEV   DT+ +VK K+  + G  PD QRL+F  +QLED R L+ Y I  E
Sbjct: 186 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 245

Query: 277 SIVNL 281
           S ++L
Sbjct: 246 STLHL 250



 Score =  108 bits (270), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 74/212 (34%), Positives = 121/212 (57%), Gaps = 8/212 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 44  LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 101

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 102 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 160

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 161 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 219

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQII 208
           +   L   G+QL++ +TL+ Y+I++   L ++
Sbjct: 220 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 251



 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/92 (41%), Positives = 57/92 (61%), Gaps = 2/92 (2%)

Query: 192 KTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQA 249
           +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  
Sbjct: 7   RTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIP 66

Query: 250 PDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 67  PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 98


>gi|297833748|ref|XP_002884756.1| hypothetical protein ARALYDRAFT_478302 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297330596|gb|EFH61015.1| hypothetical protein ARALYDRAFT_478302 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 598

 Score =  139 bits (349), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 102/291 (35%), Positives = 160/291 (54%), Gaps = 15/291 (5%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQL--ENGLTVIDYGIPNNSVIHND 58
           ++V+ ++ I+ +K +I  +  E +  D   L + G++L  ++G T+ DYGI N S +H  
Sbjct: 150 LEVESSDTIDSVKAKIQDR--EGLRPDHQRLSFHGEELFTKDGRTLADYGIQNKSALHLG 207

Query: 59  S---GVMKLYFKT-PSNEKT---FELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKL 111
           +   G M ++ K  P N  T   F L+   SDTI+N+K  I+ +EGIP+  + + + GK 
Sbjct: 208 TRLRGNMYIFVKNLPYNTFTGENFILEVESSDTIDNVKAKIQEKEGIPMDLHRLIFAGKP 267

Query: 112 IESYITLDVLNINNEDTLQMISVPKELQEIFVQTPTST-VKLEVRRAHTVLDVKKMVESM 170
           +E   TL   NI    TL +++  +   +IFV+T T   + LEV    T+ +VK M++  
Sbjct: 268 LEGGRTLAHYNIQKGSTLYLVTRFRCGMQIFVKTLTGKRINLEVESWDTIENVKAMIQDK 327

Query: 171 RICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSIFVKLLNGRYIILEVA 230
               P     +F G E L++  T A Y I++   L ++  ++  IFVKL  G+ I LEV 
Sbjct: 328 EGIQPDLQRLIFLGKE-LKDRCTPADYGIQKESTLHLVLGMQ--IFVKLFGGKIITLEVV 384

Query: 231 KFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
             DT+  VK K+  ++G  PD QRL+F   +LED R LA Y I NES + L
Sbjct: 385 SSDTIESVKAKIQDKVGSPPDQQRLIFLGHELEDGRTLADYDIRNESTLRL 435



 Score =  115 bits (289), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 100/292 (34%), Positives = 156/292 (53%), Gaps = 17/292 (5%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIHNDSG 60
           ++V+  + IE +K  I  K  E I  DL  L + G++L++  T  DYGI   S +H   G
Sbjct: 309 LEVESWDTIENVKAMIQDK--EGIQPDLQRLIFLGKELKDRCTPADYGIQKESTLHLVLG 366

Query: 61  VMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDV 120
            M+++ K     K   L+   SDTIE++K  I+ + G P  +  + + G  +E   TL  
Sbjct: 367 -MQIFVKLFGG-KIITLEVVSSDTIESVKAKIQDKVGSPPDQQRLIFLGHELEDGRTLAD 424

Query: 121 LNINNEDTLQMI-SVPKELQEIFV-------QTPTS-TVKLEVRRAHTVLDVKKMVESMR 171
            +I NE TL++   +P  +Q IFV       +TPT  T+ LEV  + T+ +VK  ++  +
Sbjct: 425 YDIRNESTLRLFFHIPHGMQ-IFVKTYAFSGETPTCKTITLEVESSDTIDNVKVKIQH-K 482

Query: 172 ICIPSEDCELFRGGEQLQNLKTLAYYDI-KENEVLQI-IRHVKHSIFVKLLNGRYIILEV 229
           + IP +   L  GG  L   +TL  Y+I KE+ + Q+ ++     IF+K L G+ I+LEV
Sbjct: 483 VGIPLDRQSLIFGGRVLVGTRTLLDYNIQKESTIHQLFLQRGGMQIFIKTLTGKTIMLEV 542

Query: 230 AKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
              DT+ +VK+K+  + G  P  QRL+F  +QLED   L  Y I   S + L
Sbjct: 543 ENSDTIANVKEKIQVKEGITPVQQRLIFFGKQLEDGVTLGDYCIHKNSTLYL 594



 Score =  102 bits (255), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 87/261 (33%), Positives = 128/261 (49%), Gaps = 18/261 (6%)

Query: 38  LENGLTVIDYGIPNNSVIH---NDSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEV 94
           LE+GLT+ DY I   S +H      G M+++ KT +  KT  L+   SDTI+N+K  I+ 
Sbjct: 28  LEDGLTLADYSIQKESTLHLVLRLRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQD 86

Query: 95  REGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEIFVQT------PTS 148
           +EGIP  +  + + GK +E   TL   +I  E TL ++   +   +IFV T         
Sbjct: 87  KEGIPPDQQRLIFAGKQLEDGHTLADYSIQKESTLHLVLRLRGGMQIFVITFPGKNFTGE 146

Query: 149 TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQL-QNLKTLAYYDIKENEVLQI 207
           T+ LEV  + T+  VK  ++      P      F G E   ++ +TLA Y I+    L +
Sbjct: 147 TLTLEVESSDTIDSVKAKIQDREGLRPDHQRLSFHGEELFTKDGRTLADYGIQNKSALHL 206

Query: 208 IRHVKHS--IFVKLL-----NGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQ 260
              ++ +  IFVK L      G   ILEV   DT+ +VK K+  + G   D  RL+F  +
Sbjct: 207 GTRLRGNMYIFVKNLPYNTFTGENFILEVESSDTIDNVKAKIQEKEGIPMDLHRLIFAGK 266

Query: 261 QLEDDRNLASYKIVNESIVNL 281
            LE  R LA Y I   S + L
Sbjct: 267 PLEGGRTLAHYNIQKGSTLYL 287



 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 47/136 (34%), Positives = 76/136 (55%), Gaps = 8/136 (5%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIHN--- 57
           ++V+ ++ I+ +K++I  KV   I  D   L + G+ L    T++DY I   S IH    
Sbjct: 464 LEVESSDTIDNVKVKIQHKVG--IPLDRQSLIFGGRVLVGTRTLLDYNIQKESTIHQLFL 521

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGI-PVHEYDIYYGGKLIESYI 116
             G M+++ KT +  KT  L+   SDTI N+K  I+V+EGI PV +  I++ GK +E  +
Sbjct: 522 QRGGMQIFIKTLTG-KTIMLEVENSDTIANVKEKIQVKEGITPVQQRLIFF-GKQLEDGV 579

Query: 117 TLDVLNINNEDTLQMI 132
           TL    I+   TL ++
Sbjct: 580 TLGDYCIHKNSTLYLV 595


>gi|290979900|ref|XP_002672671.1| polyubiquitin [Naegleria gruberi]
 gi|284086249|gb|EFC39927.1| polyubiquitin [Naegleria gruberi]
          Length = 293

 Score =  139 bits (349), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 98/282 (34%), Positives = 157/282 (55%), Gaps = 16/282 (5%)

Query: 3   VKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIHNDSGVM 62
           V+ T+ IEK+K  ++ K  + I      L   G++LE+G T+ DY +  +S I+     +
Sbjct: 17  VECTDSIEKIKELVNEK--QGIPPPSQRLILNGKKLEDGKTIQDYEMKQDSTIY-----L 69

Query: 63  KLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLN 122
            L ++      T  L+   +DTIEN+K  I+ +EGIP  +  + + GK +E   TL   N
Sbjct: 70  ALSWR-----DTITLEVESNDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 124

Query: 123 INNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCEL 181
           I  E TL ++   +   +IFV+T T  T+ LEV    T+ +VK  ++  +  IP +   L
Sbjct: 125 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESNDTIENVKSKIQD-KEGIPPDQQRL 183

Query: 182 FRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVK 239
              G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK
Sbjct: 184 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESNDTIENVK 243

Query: 240 DKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
            K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 244 SKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 285



 Score =  104 bits (259), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 73/216 (33%), Positives = 121/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+  + IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 79  LEVESNDTIENVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 136

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   +DTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 137 LRGGMQIFVKTLTG-KTITLEVESNDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 195

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV    T+ +VK  ++  +  IP 
Sbjct: 196 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESNDTIENVKSKIQD-KEGIPP 254

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 255 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 290



 Score =  103 bits (256), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 70/222 (31%), Positives = 118/222 (53%), Gaps = 15/222 (6%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+L+ KT S   +F +    +D+IE IK ++  ++GIP     +   GK +E   T+   
Sbjct: 1   MQLFIKTLSGH-SFPIDVECTDSIEKIKELVNEKQGIPPPSQRLILNGKKLEDGKTIQDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTSTVKLEVRRAHTVLDVKKMVESMRICIPSEDCEL 181
            +  + T+ +    ++           T+ LEV    T+ +VK  ++  +  IP +   L
Sbjct: 60  EMKQDSTIYLALSWRD-----------TITLEVESNDTIENVKSKIQD-KEGIPPDQQRL 107

Query: 182 FRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVK 239
              G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK
Sbjct: 108 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESNDTIENVK 167

Query: 240 DKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
            K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 168 SKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 209


>gi|28436481|gb|AAO43307.1| putative polyubiquitin [Arabidopsis thaliana]
          Length = 250

 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 91/242 (37%), Positives = 138/242 (57%), Gaps = 8/242 (3%)

Query: 46  DYGIPNNSVIH---NDSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHE 102
           DY I   S +H      G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +
Sbjct: 2   DYNIQKESTLHLVLRLRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQ 60

Query: 103 YDIYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVL 161
             + + GK +E   TL   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ 
Sbjct: 61  QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 120

Query: 162 DVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKL 219
           +VK  ++  +  IP +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK 
Sbjct: 121 NVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKT 179

Query: 220 LNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIV 279
           L G+ I LEV   DT+ +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES +
Sbjct: 180 LTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL 239

Query: 280 NL 281
           +L
Sbjct: 240 HL 241



 Score =  109 bits (273), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 74/220 (33%), Positives = 124/220 (56%), Gaps = 8/220 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 35  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 92

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 93  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 151

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 152 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 210

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSIF 216
           +   L   G+QL++ +TLA Y+I++   L ++  ++   F
Sbjct: 211 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGSF 250



 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 38/89 (42%), Positives = 54/89 (60%), Gaps = 2/89 (2%)

Query: 195 AYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDS 252
           A Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD 
Sbjct: 1   ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 60

Query: 253 QRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 61  QRLIFAGKQLEDGRTLADYNIQKESTLHL 89


>gi|28436483|gb|AAO43308.1| putative polyubiquitin [Arabidopsis thaliana]
          Length = 250

 Score =  138 bits (347), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 91/242 (37%), Positives = 138/242 (57%), Gaps = 8/242 (3%)

Query: 46  DYGIPNNSVIH---NDSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHE 102
           DY I   S +H      G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +
Sbjct: 2   DYNIQKESTLHLVLRLRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQ 60

Query: 103 YDIYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVL 161
             + + GK +E   TL   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ 
Sbjct: 61  QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 120

Query: 162 DVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKL 219
           +VK  ++  +  IP +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK 
Sbjct: 121 NVKAKIQD-KEWIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKT 179

Query: 220 LNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIV 279
           L G+ I LEV   DT+ +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES +
Sbjct: 180 LTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAVYNIQKESTL 239

Query: 280 NL 281
           +L
Sbjct: 240 HL 241



 Score =  107 bits (266), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 73/220 (33%), Positives = 123/220 (55%), Gaps = 8/220 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 35  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 92

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +E IP  +  + + GK +E   T
Sbjct: 93  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEWIPPDQQRLIFAGKQLEDGRT 151

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 152 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 210

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSIF 216
           +   L   G+QL++ +TLA Y+I++   L ++  ++   F
Sbjct: 211 DQQRLIFAGKQLEDGRTLAVYNIQKESTLHLVLRLRGGSF 250



 Score = 67.8 bits (164), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 38/89 (42%), Positives = 54/89 (60%), Gaps = 2/89 (2%)

Query: 195 AYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDS 252
           A Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD 
Sbjct: 1   ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 60

Query: 253 QRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 61  QRLIFAGKQLEDGRTLADYNIQKESTLHL 89


>gi|145524136|ref|XP_001447898.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124415426|emb|CAK80501.1| unnamed protein product [Paramecium tetraurelia]
          Length = 637

 Score =  137 bits (346), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 101/285 (35%), Positives = 153/285 (53%), Gaps = 14/285 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 355 LDVEPSDTIDAVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 412

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L    SDTI+ +K  I+ +EGIP  +  + + GK +E   T
Sbjct: 413 LRGGMQIFVKTLTG-KTITLDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 471

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ L+V  + T+  VK  ++      P 
Sbjct: 472 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDAVKAKIQDKEGIPPD 531

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSIFVKLLNGRYIILEVAKFDTVR 236
           +   +F G  +LQ+LK      I      +I R ++  IFVK L G+ I L+V   DT+ 
Sbjct: 532 QQRLIFAG--KLQHLK-----GIHSPLSFEIERWLRLQIFVKTLTGKTITLDVEPSDTID 584

Query: 237 DVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
            VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 585 AVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 629



 Score =  105 bits (261), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 92/297 (30%), Positives = 146/297 (49%), Gaps = 34/297 (11%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 131 LDVEPSDTIDAVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 188

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENI-KFIIEVREGIPVHEYDIYYGGKLIESYI 116
             G M+++ KT +  KT  L    S T+  + +  I+ +EGIP  +  + + GK +E   
Sbjct: 189 LRGGMQIFVKTLTG-KTITLDVEPSSTLLTLSRLQIQDKEGIPPDQQRLIFAGKQLEDGR 247

Query: 117 TLDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIP 175
           TL   NI  E TL ++   +   +IFV+T T  T+ L+V  + T+  VK  ++      P
Sbjct: 248 TLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDAVKAKIQDKEGIPP 307

Query: 176 ----SEDCE----LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSIFVKLLN---GRY 224
               +  C      ++   +LQ+LK +               H   S  ++  N   G+ 
Sbjct: 308 GLIKTHFCRKVIRRWKNTFRLQHLKGI---------------HSPLSFEIERWNTLTGKT 352

Query: 225 IILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           I L+V   DT+  VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 353 ITLDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 409



 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 71/206 (34%), Positives = 114/206 (55%), Gaps = 6/206 (2%)

Query: 73  KTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMI 132
           KT  L    SDTI+ +K  I+ +EGIP  +  + + GK +E   TL   NI  E TL ++
Sbjct: 351 KTITLDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 410

Query: 133 SVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNL 191
              +   +IFV+T T  T+ L+V  + T+  VK  ++  +  IP +   L   G+QL++ 
Sbjct: 411 LRLRGGMQIFVKTLTGKTITLDVEPSDTIDAVKAKIQD-KEGIPPDQQRLIFAGKQLEDG 469

Query: 192 KTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQA 249
           +TL+ Y+I++   L ++  ++    IFVK L G+ I L+V   DT+  VK K+  + G  
Sbjct: 470 RTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDAVKAKIQDKEGIP 529

Query: 250 PDSQRLVF--KRQQLEDDRNLASYKI 273
           PD QRL+F  K Q L+   +  S++I
Sbjct: 530 PDQQRLIFAGKLQHLKGIHSPLSFEI 555



 Score = 98.2 bits (243), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 74/224 (33%), Positives = 123/224 (54%), Gaps = 15/224 (6%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L    SDTI+ +K  I+ +EGIP  +   ++   L E+Y      
Sbjct: 50  MQIFVKTLTG-KTITLDVEPSDTIDAVKAKIQDKEGIPPDQQKTHF---LQENY------ 99

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ L+V  + T+  VK  ++  +  IP +   
Sbjct: 100 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDAVKAKIQD-KEGIPPDQQR 158

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I L+V    T+  +
Sbjct: 159 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSSTLLTL 218

Query: 239 KD-KLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
              ++  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 219 SRLQIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 262



 Score = 95.1 bits (235), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 68/211 (32%), Positives = 113/211 (53%), Gaps = 7/211 (3%)

Query: 46  DYGIPNNSVIH---NDSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHE 102
           +Y I   S +H      G M+++ KT +  KT  L    SDTI+ +K  I+ +EGIP  +
Sbjct: 98  NYNIQKESTLHLVLRLRGGMQIFVKTLTG-KTITLDVEPSDTIDAVKAKIQDKEGIPPDQ 156

Query: 103 YDIYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVL 161
             + + GK +E   TL   NI  E TL ++   +   +IFV+T T  T+ L+V  + T+L
Sbjct: 157 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSSTLL 216

Query: 162 DVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKL 219
            + ++    +  IP +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK 
Sbjct: 217 TLSRLQIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKT 276

Query: 220 LNGRYIILEVAKFDTVRDVKDKLFREIGQAP 250
           L G+ I L+V   DT+  VK K+  + G  P
Sbjct: 277 LTGKTITLDVEPSDTIDAVKAKIQDKEGIPP 307



 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 66/212 (31%), Positives = 112/212 (52%), Gaps = 16/212 (7%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 431 LDVEPSDTIDAVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 488

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L    SDTI+ +K  I+ +EGIP  +  + + GKL      
Sbjct: 489 LRGGMQIFVKTLTG-KTITLDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKLQHLKGI 547

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
              L+   E  L++        +IFV+T T  T+ L+V  + T+  VK  ++  +  IP 
Sbjct: 548 HSPLSFEIERWLRL--------QIFVKTLTGKTITLDVEPSDTIDAVKAKIQD-KEGIPP 598

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQII 208
           +   L   G+QL++ +TL+ Y+I++   L ++
Sbjct: 599 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 630


>gi|281212331|gb|EFA86491.1| hypothetical protein PPL_00285 [Polysphondylium pallidum PN500]
          Length = 1074

 Score =  137 bits (344), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 98/285 (34%), Positives = 156/285 (54%), Gaps = 23/285 (8%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEGSDTIENVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDTIENVKTKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSIFVKLLNGRYIILEVAKFDTVR 236
           +   L   G+QL++ +TL+ Y+I++   L ++  ++                V   DT+ 
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRG---------------VEGSDTIE 235

Query: 237 DVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 236 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 280



 Score =  129 bits (325), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDTIENVKTKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  109 bits (273), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 82/248 (33%), Positives = 133/248 (53%), Gaps = 27/248 (10%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEGSDTIENVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTSTVKLE-VRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++                 ++L  V  + T+ +VK  ++  +  IP 
Sbjct: 208 LSDYNIQKESTLHLV-----------------LRLRGVEGSDTIENVKTKIQD-KEGIPP 249

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 250 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDT 309

Query: 235 VRDVKDKL 242
           + +VK K+
Sbjct: 310 IENVKTKI 317



 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 38/97 (39%), Positives = 56/97 (57%), Gaps = 6/97 (6%)

Query: 3   VKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---NDS 59
           V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H      
Sbjct: 228 VEGSDTIENVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 285

Query: 60  GVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVRE 96
           G M+++ KT +  KT  L+   SDTIEN+K  I+ +E
Sbjct: 286 GGMQIFVKTLTG-KTITLEVEGSDTIENVKTKIQDKE 321


>gi|28436485|gb|AAO43309.1| putative polyubiquitin [Arabidopsis thaliana]
          Length = 250

 Score =  136 bits (343), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 90/242 (37%), Positives = 138/242 (57%), Gaps = 8/242 (3%)

Query: 46  DYGIPNNSVIH---NDSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHE 102
           DY I   S +H      G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +
Sbjct: 2   DYNIQKESTLHLVLRLRGGMQIFVKTLTG-KTITLEVQSSDTIDNVKAKIQDKEGIPPDQ 60

Query: 103 YDIYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVL 161
             + + GK +E   TL   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ 
Sbjct: 61  QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 120

Query: 162 DVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKL 219
           +VK  ++  +  IP +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK 
Sbjct: 121 NVKAKIQD-KEWIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKT 179

Query: 220 LNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIV 279
           L G+ I LEV   DT+ +VK K+  + G  PD +RL+F  +QLED R LA Y I  ES +
Sbjct: 180 LTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQKRLIFAGKQLEDGRTLAVYNIQKESTL 239

Query: 280 NL 281
           +L
Sbjct: 240 HL 241



 Score =  109 bits (273), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 74/220 (33%), Positives = 124/220 (56%), Gaps = 8/220 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 35  LEVQSSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 92

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +E IP  +  + + GK +E   T
Sbjct: 93  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEWIPPDQQRLIFAGKQLEDGRT 151

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 152 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 210

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSIF 216
           +   L   G+QL++ +TLA Y+I++   L ++  ++  IF
Sbjct: 211 DQKRLIFAGKQLEDGRTLAVYNIQKESTLHLVLRLRGGIF 250



 Score = 67.8 bits (164), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 38/89 (42%), Positives = 54/89 (60%), Gaps = 2/89 (2%)

Query: 195 AYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDS 252
           A Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD 
Sbjct: 1   ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVQSSDTIDNVKAKIQDKEGIPPDQ 60

Query: 253 QRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 61  QRLIFAGKQLEDGRTLADYNIQKESTLHL 89


>gi|164521185|gb|ABY60454.1| putative polyubiquitin [Adonis aestivalis var. palaestina]
          Length = 281

 Score =  136 bits (342), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 93/260 (35%), Positives = 148/260 (56%), Gaps = 10/260 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 26  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 83

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 84  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 142

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 143 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 201

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 202 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 261

Query: 235 VRDVKDKLFREIGQAPDSQR 254
           + +VK K+  + G  PD QR
Sbjct: 262 IDNVKAKIQDKEGIPPDQQR 281



 Score =  135 bits (340), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 86/225 (38%), Positives = 132/225 (58%), Gaps = 5/225 (2%)

Query: 60  GVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLD 119
           G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL 
Sbjct: 10  GGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLA 68

Query: 120 VLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSED 178
             NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP + 
Sbjct: 69  DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQ 127

Query: 179 CELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVR 236
             L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ 
Sbjct: 128 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 187

Query: 237 DVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 188 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 232



 Score = 94.4 bits (233), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 60/157 (38%), Positives = 93/157 (59%), Gaps = 4/157 (2%)

Query: 128 TLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGE 186
           TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+
Sbjct: 1   TLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQRLIFAGK 59

Query: 187 QLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFR 244
           QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  
Sbjct: 60  QLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD 119

Query: 245 EIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 120 KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 156


>gi|440798058|gb|ELR19129.1| polyubiquitin, putative [Acanthamoeba castellanii str. Neff]
          Length = 229

 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 86/223 (38%), Positives = 132/223 (59%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK+ ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKQKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  109 bits (273), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 75/212 (35%), Positives = 122/212 (57%), Gaps = 8/212 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIENVKQKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK+ ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKQKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQII 208
           +   L   G+QL++ +TLA Y+I++   L ++
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 222


>gi|32400967|gb|AAP80689.1| polyubiquitin [Griffithsia japonica]
          Length = 246

 Score =  135 bits (340), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 89/240 (37%), Positives = 138/240 (57%), Gaps = 8/240 (3%)

Query: 48  GIPNNSVIHNDSG---VMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYD 104
           G  N+S +H       VM+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  
Sbjct: 1   GTRNSSHLHPKHTLFIVMQIFVKTLTG-KTITLEVESSDTIENVKTKIQDKEGIPPDQQR 59

Query: 105 IYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDV 163
           + + GK +E   TL   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +V
Sbjct: 60  LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENV 119

Query: 164 KKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLN 221
           K  ++  +  IP +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L 
Sbjct: 120 KTKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLT 178

Query: 222 GRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           G+ I LEV   DT+ +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 GKTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 238



 Score =  108 bits (270), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 74/212 (34%), Positives = 121/212 (57%), Gaps = 8/212 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 32  LEVESSDTIENVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 89

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 90  LRGGMQIFVKTLTG-KTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 148

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 149 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKTKIQD-KEGIPP 207

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQII 208
           +   L   G+QL++ +TL+ Y+I++   L ++
Sbjct: 208 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 239


>gi|89891990|gb|ABD78847.1| ubiquitin C II [Anser anser]
          Length = 271

 Score =  135 bits (339), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 93/260 (35%), Positives = 148/260 (56%), Gaps = 10/260 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQR 254
           + +VK K+  + G  PD Q+
Sbjct: 251 IENVKAKIQDKEGIPPDQQK 270



 Score =  132 bits (332), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221


>gi|440791755|gb|ELR12993.1| polyubiquitin, putative [Acanthamoeba castellanii str. Neff]
 gi|440792103|gb|ELR13331.1| polyubiquitin, putative [Acanthamoeba castellanii str. Neff]
          Length = 220

 Score =  134 bits (338), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 87/221 (39%), Positives = 129/221 (58%), Gaps = 10/221 (4%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK+ ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKQKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSIFVKLLNGRYIILEVAKFDTVRDVKD 240
           L   G+QL++ +TLA Y+I++   L       H IFVK L G+ I LEV   DT+ +VK 
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTL-------HLIFVKTLTGKTITLEVESSDTIENVKQ 171

Query: 241 KLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 172 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 212



 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 75/212 (35%), Positives = 119/212 (56%), Gaps = 17/212 (8%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIENVKQKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL +         IFV+T T  T+ LEV  + T+ +VK+ ++  +  IP 
Sbjct: 132 LADYNIQKESTLHL---------IFVKTLTGKTITLEVESSDTIENVKQKIQD-KEGIPP 181

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQII 208
           +   L   G+QL++ +TLA Y+I++   L ++
Sbjct: 182 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 213


>gi|28436487|gb|AAO43310.1| putative polyubiquitin [Arabidopsis thaliana]
          Length = 250

 Score =  134 bits (338), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 90/242 (37%), Positives = 136/242 (56%), Gaps = 8/242 (3%)

Query: 46  DYGIPNNSVIH---NDSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHE 102
           DY I     +H      G M+++ KT +  KT  L+   SDTI+NIK  I+ +EGIP  +
Sbjct: 2   DYNIQKEPTLHLVLRLRGGMQIFVKTLTG-KTITLEVKSSDTIDNIKAKIQDKEGIPPDQ 60

Query: 103 YDIYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEIFVQTPTSTV-KLEVRRAHTVL 161
             + + GK +E   TL   NI  E TL ++   +   +IFV+T T  +  LEV  + T+ 
Sbjct: 61  QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKIITLEVESSDTID 120

Query: 162 DVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKL 219
           +VK  ++  +  IP +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK 
Sbjct: 121 NVKAKIQD-KEWIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKT 179

Query: 220 LNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIV 279
           L G+ I LEV   DT+ +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES +
Sbjct: 180 LTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAVYNIQKESTL 239

Query: 280 NL 281
           +L
Sbjct: 240 HL 241



 Score =  106 bits (265), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 73/220 (33%), Positives = 122/220 (55%), Gaps = 8/220 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++VK ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 35  LEVKSSDTIDNIKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 92

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  K   L+   SDTI+N+K  I+ +E IP  +  + + GK +E   T
Sbjct: 93  LRGGMQIFVKTLTG-KIITLEVESSDTIDNVKAKIQDKEWIPPDQQRLIFAGKQLEDGRT 151

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 152 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 210

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSIF 216
           +   L   G+QL++ +TLA Y+I++   L ++  ++   F
Sbjct: 211 DQQRLIFAGKQLEDGRTLAVYNIQKESTLHLVLRLRGGSF 250



 Score = 67.0 bits (162), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 37/89 (41%), Positives = 54/89 (60%), Gaps = 2/89 (2%)

Query: 195 AYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDS 252
           A Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ ++K K+  + G  PD 
Sbjct: 1   ADYNIQKEPTLHLVLRLRGGMQIFVKTLTGKTITLEVKSSDTIDNIKAKIQDKEGIPPDQ 60

Query: 253 QRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 61  QRLIFAGKQLEDGRTLADYNIQKESTLHL 89


>gi|18421671|ref|NP_568552.1| polyubiquitin 9 [Arabidopsis thaliana]
 gi|75170661|sp|Q9FHQ6.1|UBQ9_ARATH RecName: Full=Polyubiquitin 9; Contains: RecName:
           Full=Ubiquitin-related 1; Contains: RecName:
           Full=Ubiquitin-related 2; Contains: RecName:
           Full=Ubiquitin-related 3; Contains: RecName:
           Full=Ubiquitin-related 4; Flags: Precursor
 gi|9757974|dbj|BAB08310.1| polyubiquitin [Arabidopsis thaliana]
 gi|332006830|gb|AED94213.1| polyubiquitin 9 [Arabidopsis thaliana]
          Length = 322

 Score =  134 bits (337), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 96/275 (34%), Positives = 154/275 (56%), Gaps = 11/275 (4%)

Query: 16  IHAKVE--EEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---NDSGVMKLYFKTPS 70
           + AK++  E I  D   L ++G+ L++G T+ DY I  +S++H      G M+++ KT +
Sbjct: 28  VKAKIQDIEGIPLDQQRLIFSGKLLDDGRTLADYSIQKDSILHLALRLRGGMQIFVKTLT 87

Query: 71  NEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQ 130
             KT  L+   SDTI+N+K  I+ +EG+P  +  + + GK ++   TL   NI  E TL 
Sbjct: 88  G-KTITLEVESSDTIDNVKAKIQDKEGVPPDQQRLIFAGKQLDDGRTLADYNIQKESTLH 146

Query: 131 MISVPKELQEIFVQTPT-STVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQ 189
           ++   +   +IFV+T T  T+ LEV  + T  +VK  ++  +  IP +   L   G+QL+
Sbjct: 147 LVLRLRGGMQIFVRTLTRKTIALEVESSDTTDNVKAKIQD-KEGIPPDQQRLIFAGKQLE 205

Query: 190 NLKTLAYYDIKENEVLQIIRHV--KHSIFVKLLNGRYIILEVAKFDTVRDVKDKLFREIG 247
           + +TLA Y+I++   L ++  +     IFV  L G+ I LEV   DT+ +VK K+  +  
Sbjct: 206 DGRTLADYNIQKESTLHLVLRLCGGMQIFVNTLTGKTITLEVESSDTIDNVKAKIQDKER 265

Query: 248 QAPDSQRLVFKRQQLEDD-RNLASYKIVNESIVNL 281
             PD QRL+F  +QLED    LA Y I  ES ++L
Sbjct: 266 IQPDQQRLIFAGEQLEDGYYTLADYNIQKESTLHL 300



 Score =  115 bits (288), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 79/223 (35%), Positives = 126/223 (56%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT + EKT  +    SDTI N+K  I+  EGIP+ +  + + GKL++   TL   
Sbjct: 3   MQIHAKTLT-EKTITIDVVSSDTINNVKAKIQDIEGIPLDQQRLIFSGKLLDDGRTLADY 61

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           +I  +  L +    +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  +P +   
Sbjct: 62  SIQKDSILHLALRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGVPPDQQR 120

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL + +TLA Y+I++   L ++  ++    IFV+ L  + I LEV   DT  +V
Sbjct: 121 LIFAGKQLDDGRTLADYNIQKESTLHLVLRLRGGMQIFVRTLTRKTIALEVESSDTTDNV 180

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 181 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 223



 Score = 94.0 bits (232), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 73/230 (31%), Positives = 123/230 (53%), Gaps = 14/230 (6%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E +  D   L +AG+QL++G T+ DY I   S +H    
Sbjct: 93  LEVESSDTIDNVKAKIQDK--EGVPPDQQRLIFAGKQLDDGRTLADYNIQKESTLHLVLR 150

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ +T +  KT  L+   SDT +N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 151 LRGGMQIFVRTLT-RKTIALEVESSDTTDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 209

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++       +IFV T T  T+ LEV  + T+ +VK  ++      P 
Sbjct: 210 LADYNIQKESTLHLVLRLCGGMQIFVNTLTGKTITLEVESSDTIDNVKAKIQDKERIQPD 269

Query: 177 EDCELFRGGEQLQN-LKTLAYYDIKENEVLQIIRHVKHS-----IFVKLL 220
           +   +F  GEQL++   TLA Y+I++   L ++  ++       IF+ LL
Sbjct: 270 QQRLIF-AGEQLEDGYYTLADYNIQKESTLHLVLRLRGGECFGFIFLFLL 318


>gi|21592581|gb|AAM64530.1| ubiquitin homolog [Arabidopsis thaliana]
          Length = 229

 Score =  134 bits (337), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLXLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  107 bits (268), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 73/216 (33%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLX 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TLA Y+I++   L ++  ++
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 226


>gi|344232965|gb|EGV64838.1| ubiquitin [Candida tenuis ATCC 10573]
          Length = 229

 Score =  134 bits (336), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  107 bits (267), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 73/216 (33%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TLA Y+I++   L ++  ++
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 226


>gi|5912028|emb|CAB55973.1| hypothetical protein [Homo sapiens]
          Length = 239

 Score =  134 bits (336), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 85/225 (37%), Positives = 132/225 (58%), Gaps = 5/225 (2%)

Query: 60  GVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLD 119
           G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL 
Sbjct: 9   GGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLS 67

Query: 120 VLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSED 178
             NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP + 
Sbjct: 68  DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQ 126

Query: 179 CELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVR 236
             L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ 
Sbjct: 127 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 186

Query: 237 DVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 187 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 231



 Score =  108 bits (270), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 74/219 (33%), Positives = 124/219 (56%), Gaps = 8/219 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 25  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 82

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 83  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 141

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 142 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 200

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSI 215
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  +
Sbjct: 201 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGV 239


>gi|151935411|gb|ABS18744.1| ubiqutin ligase-like protein [Oryza sativa Japonica Group]
 gi|326518380|dbj|BAJ88219.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 229

 Score =  133 bits (335), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  108 bits (269), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 73/216 (33%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TLA Y+I++   L ++  ++
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 226


>gi|224116110|ref|XP_002317213.1| predicted protein [Populus trichocarpa]
 gi|118487986|gb|ABK95814.1| unknown [Populus trichocarpa]
 gi|222860278|gb|EEE97825.1| predicted protein [Populus trichocarpa]
          Length = 229

 Score =  133 bits (335), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  109 bits (273), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 74/219 (33%), Positives = 124/219 (56%), Gaps = 8/219 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSI 215
           +   L   G+QL++ +TLA Y+I++   L ++  ++  I
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGI 229


>gi|163573|gb|AAA30719.1| polyubiquitin, partial [Bos taurus]
          Length = 245

 Score =  133 bits (335), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 85/225 (37%), Positives = 132/225 (58%), Gaps = 5/225 (2%)

Query: 60  GVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLD 119
           G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL 
Sbjct: 10  GGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLS 68

Query: 120 VLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSED 178
             NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP + 
Sbjct: 69  DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQ 127

Query: 179 CELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVR 236
             L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ 
Sbjct: 128 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 187

Query: 237 DVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 188 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 232



 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 74/220 (33%), Positives = 124/220 (56%), Gaps = 8/220 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 26  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 83

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 84  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 142

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 143 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 201

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSIF 216
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  + 
Sbjct: 202 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGVL 241



 Score = 91.7 bits (226), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 58/157 (36%), Positives = 93/157 (59%), Gaps = 4/157 (2%)

Query: 128 TLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGE 186
           TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+
Sbjct: 1   TLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQRLIFAGK 59

Query: 187 QLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFR 244
           QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  
Sbjct: 60  QLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD 119

Query: 245 EIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 120 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 156


>gi|355754493|gb|AET06143.1| ubiquitin [Papaver somniferum]
          Length = 229

 Score =  133 bits (335), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  107 bits (268), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 73/216 (33%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TLA Y+I++   L ++  ++
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 226


>gi|28804499|dbj|BAC57955.1| polyubiquitin [Aster tripolium]
          Length = 229

 Score =  133 bits (335), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  108 bits (270), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 73/219 (33%), Positives = 124/219 (56%), Gaps = 8/219 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSI 215
           +   L   G+QL++ +TLA Y+I++   L ++  ++  +
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGL 229


>gi|30523391|gb|AAP31578.1| ubiquitin [Hevea brasiliensis]
          Length = 230

 Score =  133 bits (335), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  108 bits (269), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 73/220 (33%), Positives = 124/220 (56%), Gaps = 8/220 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSIF 216
           +   L   G+QL++ +TLA Y+I++   L ++  ++   +
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGDY 230


>gi|53850089|emb|CAH59739.1| polyubiquitin [Plantago major]
          Length = 232

 Score =  133 bits (335), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  108 bits (270), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 73/219 (33%), Positives = 124/219 (56%), Gaps = 8/219 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSI 215
           +   L   G+QL++ +TLA Y+I++   L ++  ++  +
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGL 229


>gi|388507280|gb|AFK41706.1| unknown [Medicago truncatula]
          Length = 233

 Score =  133 bits (335), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  107 bits (268), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 73/218 (33%), Positives = 123/218 (56%), Gaps = 8/218 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
           +   L   G+QL++ +TLA Y+I++   L ++  ++  
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 228


>gi|380446928|gb|AFD53810.1| ubiquitin, partial [Trichoderma harzianum]
          Length = 264

 Score =  133 bits (335), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 85/226 (37%), Positives = 132/226 (58%), Gaps = 5/226 (2%)

Query: 59  SGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITL 118
           S  M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL
Sbjct: 3   SATMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTL 61

Query: 119 DVLNINNEDTLQMISVPKELQEIFVQTPT-STVKLEVRRAHTVLDVKKMVESMRICIPSE 177
              NI  E TL ++   +   +IFV+T T  TV LEV  + T+ +VK  ++  +  IP +
Sbjct: 62  SDYNIQKESTLHLVLRLRGGMQIFVKTLTWKTVTLEVESSDTIDNVKSKIQD-KEGIPPD 120

Query: 178 DCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTV 235
              L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+
Sbjct: 121 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI 180

Query: 236 RDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
            +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 181 DNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYXIQXESTLHL 226



 Score =  121 bits (303), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 85/244 (34%), Positives = 137/244 (56%), Gaps = 10/244 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 20  LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 77

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 78  LRGGMQIFVKTLT-WKTVTLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 136

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 137 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 195

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y I+    L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 196 DQQRLIFAGKQLEDGRTLSDYXIQXESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 255

Query: 235 VRDV 238
           + +V
Sbjct: 256 IDNV 259


>gi|18412785|ref|NP_567286.1| ubiquitin 11 [Arabidopsis thaliana]
 gi|30679296|ref|NP_849291.1| polyubiquitin 14 [Arabidopsis thaliana]
 gi|79325001|ref|NP_001031585.1| ubiquitin 11 [Arabidopsis thaliana]
 gi|186511479|ref|NP_567247.2| polyubiquitin 14 [Arabidopsis thaliana]
 gi|186511546|ref|NP_001118936.1| ubiquitin 11 [Arabidopsis thaliana]
 gi|224078711|ref|XP_002305607.1| predicted protein [Populus trichocarpa]
 gi|224169339|ref|XP_002339256.1| predicted protein [Populus trichocarpa]
 gi|302595976|sp|P0CH33.1|UBQ11_ARATH RecName: Full=Polyubiquitin 11; Contains: RecName: Full=Ubiquitin;
           Flags: Precursor
 gi|5732081|gb|AAD48980.1|AF162444_12 contains similarity to Pfam family PF00240 - Ubiquitin family;
           score=526.5, E=1.9e-154, N=3 [Arabidopsis thaliana]
 gi|3882081|emb|CAA10056.1| polyubiquitin [Vicia faba]
 gi|7267264|emb|CAB81047.1| AT4g05050 [Arabidopsis thaliana]
 gi|12583569|emb|CAC27335.1| putative polyubiquitin [Picea abies]
 gi|15450587|gb|AAK96565.1| AT4g05050/T32N4_13 [Arabidopsis thaliana]
 gi|15810026|gb|AAL06940.1| AT4g05050/T32N4_13 [Arabidopsis thaliana]
 gi|15982846|gb|AAL09770.1| AT4g05050/T32N4_13 [Arabidopsis thaliana]
 gi|20466093|gb|AAM19968.1| AT4g05050/T32N4_13 [Arabidopsis thaliana]
 gi|24899675|gb|AAN65052.1| Unknown protein [Arabidopsis thaliana]
 gi|56481667|gb|AAV92464.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
 gi|56481669|gb|AAV92465.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
 gi|56481671|gb|AAV92466.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
 gi|56481673|gb|AAV92467.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
 gi|56481675|gb|AAV92468.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
 gi|56481677|gb|AAV92469.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
 gi|56481679|gb|AAV92470.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
 gi|56481681|gb|AAV92471.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
 gi|56481683|gb|AAV92472.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
 gi|56481685|gb|AAV92473.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
 gi|56481687|gb|AAV92474.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
 gi|56481689|gb|AAV92475.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
 gi|56481691|gb|AAV92476.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
 gi|56481693|gb|AAV92477.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
 gi|56481695|gb|AAV92478.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
 gi|56481697|gb|AAV92479.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
 gi|56481699|gb|AAV92480.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
 gi|56481701|gb|AAV92481.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
 gi|56481703|gb|AAV92482.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
 gi|56481705|gb|AAV92483.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
 gi|56481707|gb|AAV92484.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
 gi|56481709|gb|AAV92485.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
 gi|56481711|gb|AAV92486.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
 gi|56481713|gb|AAV92487.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
 gi|56481715|gb|AAV92488.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
 gi|56481717|gb|AAV92489.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
 gi|56481719|gb|AAV92490.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
 gi|110740912|dbj|BAE98552.1| hypothetical protein [Arabidopsis thaliana]
 gi|222848571|gb|EEE86118.1| predicted protein [Populus trichocarpa]
 gi|222874764|gb|EEF11895.1| predicted protein [Populus trichocarpa]
 gi|332656844|gb|AEE82244.1| polyubiquitin 14 [Arabidopsis thaliana]
 gi|332656845|gb|AEE82245.1| polyubiquitin 14 [Arabidopsis thaliana]
 gi|332657068|gb|AEE82468.1| ubiquitin 11 [Arabidopsis thaliana]
 gi|332657069|gb|AEE82469.1| ubiquitin 11 [Arabidopsis thaliana]
 gi|332657070|gb|AEE82470.1| ubiquitin 11 [Arabidopsis thaliana]
 gi|399513946|gb|AFP43343.1| polyubiquitin [Arabidopsis thaliana]
          Length = 229

 Score =  133 bits (335), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  108 bits (269), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 73/216 (33%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TLA Y+I++   L ++  ++
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 226


>gi|168062150|ref|XP_001783045.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162665429|gb|EDQ52114.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 229

 Score =  133 bits (335), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  107 bits (267), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 73/216 (33%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TLA Y+I++   L ++  ++
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 226


>gi|217074516|gb|ACJ85618.1| unknown [Medicago truncatula]
          Length = 229

 Score =  133 bits (335), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  107 bits (268), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 73/216 (33%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TLA Y+I++   L ++  ++
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 226


>gi|302822663|ref|XP_002992988.1| hypothetical protein SELMODRAFT_187148 [Selaginella moellendorffii]
 gi|302825886|ref|XP_002994514.1| hypothetical protein SELMODRAFT_138728 [Selaginella moellendorffii]
 gi|300137505|gb|EFJ04422.1| hypothetical protein SELMODRAFT_138728 [Selaginella moellendorffii]
 gi|300139188|gb|EFJ05934.1| hypothetical protein SELMODRAFT_187148 [Selaginella moellendorffii]
          Length = 229

 Score =  133 bits (335), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  107 bits (268), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 73/219 (33%), Positives = 124/219 (56%), Gaps = 8/219 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSI 215
           +   L   G+QL++ +TLA Y+I++   L ++  ++  +
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGM 229


>gi|217074566|gb|ACJ85643.1| unknown [Medicago truncatula]
          Length = 229

 Score =  133 bits (335), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQNKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  107 bits (268), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 73/216 (33%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQNK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TLA Y+I++   L ++  ++
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 226


>gi|357513727|ref|XP_003627152.1| Ubiquitin [Medicago truncatula]
 gi|355521174|gb|AET01628.1| Ubiquitin [Medicago truncatula]
          Length = 270

 Score =  133 bits (335), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  119 bits (298), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 82/234 (35%), Positives = 133/234 (56%), Gaps = 10/234 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILE 228
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LE
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 244



 Score = 84.0 bits (206), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 59/169 (34%), Positives = 94/169 (55%), Gaps = 7/169 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKK 165
           L   NI  E TL ++   +   +IFV+T T  T+ LE  R     +++K
Sbjct: 208 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEDGRTLADYNIQK 256


>gi|363992286|gb|AEW46688.1| polyubiquitin, partial [Ulva linza]
          Length = 226

 Score =  133 bits (335), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  108 bits (269), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 73/216 (33%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TLA Y+I++   L ++  ++
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 226


>gi|357137122|ref|XP_003570150.1| PREDICTED: polyubiquitin 11-like [Brachypodium distachyon]
          Length = 241

 Score =  133 bits (335), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  108 bits (269), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 73/222 (32%), Positives = 125/222 (56%), Gaps = 8/222 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSIFVK 218
           +   L   G+QL++ +TLA Y+I++   L ++  ++    ++
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGALMQ 232


>gi|374412404|gb|AEZ49160.1| polyubiquitin, partial [Wolffia australiana]
          Length = 281

 Score =  133 bits (334), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 21  MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 79

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 80  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 138

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 139 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 198

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 199 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 241



 Score =  131 bits (329), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 89/248 (35%), Positives = 143/248 (57%), Gaps = 10/248 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 35  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 92

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 93  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 151

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 152 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 210

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEVA  DT
Sbjct: 211 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVASSDT 270

Query: 235 VRDVKDKL 242
           + +VK K+
Sbjct: 271 IDNVKAKI 278



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 61/172 (35%), Positives = 98/172 (56%), Gaps = 7/172 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 111 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 168

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 169 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 227

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVE 168
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++
Sbjct: 228 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVASSDTIDNVKAKIQ 279



 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 35/70 (50%), Positives = 44/70 (62%)

Query: 212 KHSIFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASY 271
           K  IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+F  +QLED R LA Y
Sbjct: 20  KMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 79

Query: 272 KIVNESIVNL 281
            I  ES ++L
Sbjct: 80  NIQKESTLHL 89


>gi|168005465|ref|XP_001755431.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162693559|gb|EDQ79911.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 231

 Score =  133 bits (334), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  107 bits (267), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 73/216 (33%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TLA Y+I++   L ++  ++
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 226


>gi|375298520|dbj|BAL61087.1| polyubiquitin [Dianthus caryophyllus]
          Length = 229

 Score =  133 bits (334), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  107 bits (267), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 73/216 (33%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TLA Y+I++   L ++  ++
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 226


>gi|358336555|dbj|GAA55031.1| ubiquitin C [Clonorchis sinensis]
          Length = 228

 Score =  133 bits (334), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 74/216 (34%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 226


>gi|302595947|sp|P0CG73.1|UBI1P_CANAL RecName: Full=Polyubiquitin; Contains: RecName:
           Full=Ubiquitin-related; Contains: RecName:
           Full=Ubiquitin; Flags: Precursor
 gi|1143188|gb|AAA84868.1| ubiquitin precursor [Candida albicans]
          Length = 229

 Score =  133 bits (334), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRSRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  107 bits (268), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 72/216 (33%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  SRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 226


>gi|290462837|gb|ADD24466.1| Ubiquitin [Lepeophtheirus salmonis]
          Length = 229

 Score =  132 bits (333), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  108 bits (269), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 74/216 (34%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 226


>gi|340727978|ref|XP_003402310.1| PREDICTED: polyubiquitin-B-like isoform 1 [Bombus terrestris]
 gi|340727980|ref|XP_003402311.1| PREDICTED: polyubiquitin-B-like isoform 2 [Bombus terrestris]
 gi|340727982|ref|XP_003402312.1| PREDICTED: polyubiquitin-B-like isoform 3 [Bombus terrestris]
          Length = 229

 Score =  132 bits (333), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 74/216 (34%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 226


>gi|357474767|ref|XP_003607669.1| Multidrug resistance protein ABC transporter family [Medicago
           truncatula]
 gi|355508724|gb|AES89866.1| Multidrug resistance protein ABC transporter family [Medicago
           truncatula]
          Length = 448

 Score =  132 bits (333), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 87/227 (38%), Positives = 133/227 (58%), Gaps = 5/227 (2%)

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
           DS  M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 216 DSFKMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 274

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 275 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 333

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 334 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 393

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 394 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 440



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 73/212 (34%), Positives = 121/212 (57%), Gaps = 8/212 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 234 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 291

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 292 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 350

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 351 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 409

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQII 208
           +   L   G+QL++ +TLA Y+I++   L ++
Sbjct: 410 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 441


>gi|330805887|ref|XP_003290908.1| ubiquitin [Dictyostelium purpureum]
 gi|325078946|gb|EGC32571.1| ubiquitin [Dictyostelium purpureum]
          Length = 229

 Score =  132 bits (333), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEGSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 74/219 (33%), Positives = 124/219 (56%), Gaps = 8/219 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEGSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEGSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSI 215
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  +
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGL 229


>gi|145524134|ref|XP_001447897.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124415425|emb|CAK80500.1| unnamed protein product [Paramecium tetraurelia]
          Length = 358

 Score =  132 bits (333), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 95/271 (35%), Positives = 148/271 (54%), Gaps = 12/271 (4%)

Query: 18  AKVE--EEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---NDSGVMKLYFKTPSNE 72
           AK++  E I  D   L +AG+QLE+G T+ DY I   S +H      G M+++ KT +  
Sbjct: 1   AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG- 59

Query: 73  KTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMI 132
           KT  L    SDTI+ +K  I+ +EGIP  +  + + GK +E   TL   NI  E TL ++
Sbjct: 60  KTITLDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 119

Query: 133 SVPKELQEIFVQTPTSTVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLK 192
                L+   + T  +   L+V  + T+  VK  ++  +  IP +   L   G+QL++ +
Sbjct: 120 L---RLRGGILLTWKNHAALDVEPSDTIDAVKAKIQD-KEGIPPDQQRLIFAGKQLEDGR 175

Query: 193 TLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAP 250
           TL+ Y+I++   L ++  ++    IFVK L G+ I L+V   DT+  VK K+  + G  P
Sbjct: 176 TLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDAVKAKIQDKEGIPP 235

Query: 251 DSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           D QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 236 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 266



 Score = 94.0 bits (232), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 73/241 (30%), Positives = 126/241 (52%), Gaps = 14/241 (5%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 64  LDVEPSDTIDAVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 121

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G + L +K  +      L    SDTI+ +K  I+ +EGIP  +  + + GK +E   T
Sbjct: 122 LRGGILLTWKNHA-----ALDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 176

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ L+V  + T+  VK  ++  +  IP 
Sbjct: 177 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDAVKAKIQD-KEGIPP 235

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFV +     + + V + DT
Sbjct: 236 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGIMIFVSIFTSFILYIHVKQSDT 295

Query: 235 V 235
           +
Sbjct: 296 I 296


>gi|302143596|emb|CBI22349.3| unnamed protein product [Vitis vinifera]
          Length = 298

 Score =  132 bits (333), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 28  MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 86

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 87  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 145

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 146 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 205

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 206 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 248



 Score =  127 bits (320), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 88/248 (35%), Positives = 142/248 (57%), Gaps = 10/248 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 42  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 99

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 100 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 158

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 159 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 217

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 218 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 277

Query: 235 VRDVKDKL 242
           + +VK K+
Sbjct: 278 IDNVKAKI 285



 Score = 90.9 bits (224), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 65/181 (35%), Positives = 102/181 (56%), Gaps = 10/181 (5%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 118 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 175

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 176 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 234

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMV---ESMRIC 173
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  +   E M+I 
Sbjct: 235 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGMQIF 294

Query: 174 I 174
           I
Sbjct: 295 I 295



 Score = 65.1 bits (157), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 35/70 (50%), Positives = 44/70 (62%)

Query: 212 KHSIFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASY 271
           K  IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+F  +QLED R LA Y
Sbjct: 27  KMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 86

Query: 272 KIVNESIVNL 281
            I  ES ++L
Sbjct: 87  NIQKESTLHL 96


>gi|452824412|gb|EME31415.1| ubiquitin [Galdieria sulphuraria]
          Length = 229

 Score =  132 bits (333), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKSKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  107 bits (267), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 74/219 (33%), Positives = 124/219 (56%), Gaps = 8/219 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKSKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSI 215
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  +
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGL 229


>gi|358332080|dbj|GAA27344.2| polyubiquitin-A [Clonorchis sinensis]
          Length = 288

 Score =  132 bits (333), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 84/224 (37%), Positives = 131/224 (58%), Gaps = 5/224 (2%)

Query: 61  VMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDV 120
            M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL  
Sbjct: 60  AMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 118

Query: 121 LNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDC 179
            NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +  
Sbjct: 119 YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKAKIQD-KEGIPPDQQ 177

Query: 180 ELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRD 237
            L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +
Sbjct: 178 RLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIEN 237

Query: 238 VKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 238 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 281



 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 74/212 (34%), Positives = 121/212 (57%), Gaps = 8/212 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 75  LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 132

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 133 LRGGMQIFVKTLTG-KTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 191

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 192 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 250

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQII 208
           +   L   G+QL++ +TL+ Y+I++   L ++
Sbjct: 251 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 282



 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 34/74 (45%), Positives = 45/74 (60%)

Query: 208 IRHVKHSIFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRN 267
           +R     IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+F  +QLED R 
Sbjct: 56  LRRTAMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 115

Query: 268 LASYKIVNESIVNL 281
           L+ Y I  ES ++L
Sbjct: 116 LSDYNIQKESTLHL 129


>gi|297809843|ref|XP_002872805.1| hypothetical protein ARALYDRAFT_490270 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297318642|gb|EFH49064.1| hypothetical protein ARALYDRAFT_490270 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 309

 Score =  132 bits (333), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  128 bits (322), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 88/248 (35%), Positives = 142/248 (57%), Gaps = 10/248 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250

Query: 235 VRDVKDKL 242
           + +VK K+
Sbjct: 251 IDNVKAKI 258



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 61/172 (35%), Positives = 98/172 (56%), Gaps = 7/172 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVE 168
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++
Sbjct: 208 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 259


>gi|357474765|ref|XP_003607668.1| Multidrug resistance protein ABC transporter family [Medicago
           truncatula]
 gi|355508723|gb|AES89865.1| Multidrug resistance protein ABC transporter family [Medicago
           truncatula]
          Length = 497

 Score =  132 bits (332), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 87/227 (38%), Positives = 133/227 (58%), Gaps = 5/227 (2%)

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
           DS  M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 216 DSFKMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 274

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 275 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 333

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 334 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 393

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 394 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 440



 Score =  116 bits (291), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 82/234 (35%), Positives = 133/234 (56%), Gaps = 10/234 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 234 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 291

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 292 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 350

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 351 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 409

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILE 228
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LE
Sbjct: 410 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 463


>gi|334362473|gb|AEG78435.1| ubiquitin C variant 3 [Epinephelus coioides]
          Length = 268

 Score =  132 bits (332), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 2   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 60

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 61  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 119

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 120 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 179

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 180 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 222



 Score =  128 bits (322), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 91/260 (35%), Positives = 145/260 (55%), Gaps = 17/260 (6%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 16  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 73

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 74  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 132

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 133 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 191

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 192 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 251

Query: 235 VRDVKDKLFREIGQAPDSQR 254
           + +V        GQ P ++R
Sbjct: 252 IENVX-------GQDPGTKR 264


>gi|35187449|gb|AAQ84316.1| fiber polyubiquitin [Gossypium barbadense]
          Length = 229

 Score =  132 bits (332), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 130/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES + L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLPL 221



 Score =  107 bits (267), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 73/218 (33%), Positives = 123/218 (56%), Gaps = 8/218 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
           +   L   G+QL++ +TLA Y+I++   L ++  ++  
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLPLVLRLRGG 228


>gi|330805713|ref|XP_003290823.1| hypothetical protein DICPUDRAFT_92560 [Dictyostelium purpureum]
 gi|325079033|gb|EGC32654.1| hypothetical protein DICPUDRAFT_92560 [Dictyostelium purpureum]
          Length = 229

 Score =  132 bits (332), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDTIENVKTKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  107 bits (268), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 74/218 (33%), Positives = 123/218 (56%), Gaps = 8/218 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEGSDTIENVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDTIENVKTKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 228


>gi|340375318|ref|XP_003386183.1| PREDICTED: polyubiquitin-like [Amphimedon queenslandica]
          Length = 968

 Score =  132 bits (332), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 99/292 (33%), Positives = 162/292 (55%), Gaps = 15/292 (5%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ +E +K +I  K  E I  D   L + G+QLENG T+ DY I N S +H    
Sbjct: 15  LEVEASDTVESVKEKIQDK--EGIPPDQQRLIFVGKQLENGRTLSDYNIQNESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDT+ENIK  I+ +EGIP  +  + + G+ +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTMENIKAKIQDKEGIPPDQQRLIFAGRQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRRRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLL----NGRYIILEVA 230
           +   L   G+ L++ +TL+ Y+I++   L ++   +H   IFVK+      G+ I L+V 
Sbjct: 191 DQQRLIFAGKILEDGRTLSDYNIQKESTLHLVLCFRHDMLIFVKIWIGNETGKIIFLQVE 250

Query: 231 KFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDR-NLASYKIVNESIVNL 281
             +T+ +VK K+  +    PD Q+L+F  +QLE+    L  Y I  ES ++L
Sbjct: 251 PSNTIENVKAKIQDKERIPPDQQKLIFAGKQLENGHYTLLDYGIQRESTLDL 302



 Score =  118 bits (295), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 80/223 (35%), Positives = 128/223 (57%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M++  K P   ++  L+   SDT+E++K  I+ +EGIP  +  + + GK +E+  TL   
Sbjct: 1   MRISIK-PLVGESLSLEVEASDTVESVKEKIQDKEGIPPDQQRLIFVGKQLENGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI NE TL ++   +   +IFV+T T  T+ LEV  + T+ ++K  ++  +  IP +   
Sbjct: 60  NIQNESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTMENIKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQII--RHVKHSIFVKLLNGRYIILEVAKFDTVRDV 238
           L   G QL++ +TL+ Y+I++   L ++  R     IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGRQLEDGRTLSDYNIQKESTLHLVLRRRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  + LED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKILEDGRTLSDYNIQKESTLHL 221



 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 86/291 (29%), Positives = 148/291 (50%), Gaps = 14/291 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ +E +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEPSDTMENIKAKIQDK--EGIPPDQQRLIFAGRQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK++E   T
Sbjct: 149 RRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKILEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTST-----VKLEVRRAHTVLDVKKMVESMRI 172
           L   NI  E TL ++   +    IFV+          + L+V  ++T+ +VK  ++  + 
Sbjct: 208 LSDYNIQKESTLHLVLCFRHDMLIFVKIWIGNETGKIIFLQVEPSNTIENVKAKIQD-KE 266

Query: 173 CIPSEDCELFRGGEQLQNLK-TLAYYDIKENEVLQIIRHVKHSIFVKLLNGRYII-LEVA 230
            IP +  +L   G+QL+N   TL  Y I+    L ++      I +K ++G  +  + + 
Sbjct: 267 RIPPDQQKLIFAGKQLENGHYTLLDYGIQRESTLDLLLPDHMIINIKEVDGNVVTDVIIN 326

Query: 231 KFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
            +  +  +K  +  +     D QRL F  +QL   R  + YKI +   ++L
Sbjct: 327 SYRNIGYIKADIKSKTNIPYDEQRLTFAGKQLSFGRTFSHYKIKDGDTLHL 377



 Score =  100 bits (249), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 93/305 (30%), Positives = 153/305 (50%), Gaps = 22/305 (7%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVI---HN 57
           +KV  T+ IE +  +I  ++   I +      Y  ++L+N LT+ DY I N S++   H 
Sbjct: 400 LKVDLTDTIENVMSQIQDEIRIPIDQQKLSTRYR-KRLDNSLTLSDYNIENKSILYLNHY 458

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G   +Y ++ +      ++   +DTI ++K +IE +E I   +  ++Y G+L++   T
Sbjct: 459 HRGGENIYIRSVTG-NIIVIEVLPTDTISDLKRMIEDKERISPTDQTLFYAGQLLDDAST 517

Query: 118 LDVLNINNEDTLQMI--SVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICI 174
           L   +I  E  L +   S P     I+V+T T  T +L V   +T+ +VK  +E     I
Sbjct: 518 LASYDIPMESVLDLFIRSNPNPNMTIYVKTLTGKTFELNVIYCNTIGNVKTKIEETG-GI 576

Query: 175 PSEDCELFRGGEQLQN-----------LKTLAYYDIKENEVLQIIRHVKH--SIFVKLLN 221
           P    ++   G QL++           +KTL  + IK+   L ++  ++    IFVK L 
Sbjct: 577 PCNQQKIIYDGRQLEDDYIEDTLLPNKIKTLFDHGIKDKSTLHLLLRLRGGMQIFVKTLT 636

Query: 222 GRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           GR I LEV   DT+ +VK K+  + G  PD QRL+F  + L DDR L+ Y I  +  ++L
Sbjct: 637 GRTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKVLVDDRTLSDYNIKTKDTIDL 696

Query: 282 TDLGM 286
              GM
Sbjct: 697 QHKGM 701



 Score = 87.4 bits (215), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 89/299 (29%), Positives = 154/299 (51%), Gaps = 28/299 (9%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---- 56
           ++V+ ++ IE +K +I  K  E I  D   L +AG+ LE+G T+ DY I   S +H    
Sbjct: 167 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKILEDGRTLSDYNIQKESTLHLVLC 224

Query: 57  --NDSGV-MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIE 113
             +D  + +K++    + +  F L+   S+TIEN+K  I+ +E IP  +  + + GK +E
Sbjct: 225 FRHDMLIFVKIWIGNETGKIIF-LQVEPSNTIENVKAKIQDKERIPPDQQKLIFAGKQLE 283

Query: 114 S--YITLDVLNINNEDTLQMISVPKEL----QEIFVQTPTSTVKLEVRR-AHTVLDVKKM 166
           +  Y  LD   I  E TL ++ +P  +    +E+     T  +    R   +   D+K  
Sbjct: 284 NGHYTLLD-YGIQRESTLDLL-LPDHMIINIKEVDGNVVTDVIINSYRNIGYIKADIKS- 340

Query: 167 VESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQII-RHVKHSIFV--KLLNGR 223
               +  IP ++  L   G+QL   +T ++Y IK+ + L ++ R   H+IFV  K+L   
Sbjct: 341 ----KTNIPYDEQRLTFAGKQLSFGRTFSHYKIKDGDTLHLVPRRPGHTIFVETKILFSP 396

Query: 224 YIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFK-RQQLEDDRNLASYKIVNESIVNL 281
            I L+V   DT+ +V  ++  EI    D Q+L  + R++L++   L+ Y I N+SI+ L
Sbjct: 397 TITLKVDLTDTIENVMSQIQDEIRIPIDQQKLSTRYRKRLDNSLTLSDYNIENKSILYL 455



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 50/172 (29%), Positives = 81/172 (47%), Gaps = 29/172 (16%)

Query: 30  ELFYAGQQLENGL-----------TVIDYGIPNNSVIHNDSGV---MKLYFKTPSNEKTF 75
           ++ Y G+QLE+             T+ D+GI + S +H    +   M+++ KT +  +T 
Sbjct: 582 KIIYDGRQLEDDYIEDTLLPNKIKTLFDHGIKDKSTLHLLLRLRGGMQIFVKTLTG-RTI 640

Query: 76  ELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMISVP 135
            L+   SDTIEN+K  I+ +EGIP  +  + + GK++    TL   NI  +DT+ +    
Sbjct: 641 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKVLVDDRTLSDYNIKTKDTIDLQHKG 700

Query: 136 KELQEI--------FVQTPTS---TVKLEVRRAHTVLDVKKMVESM--RICI 174
            E Q +        +  TP +    V   V   H   D+KK +  M  R CI
Sbjct: 701 METQPLNHYKLLTFYEHTPATKIWNVHFVVTMNH-FYDIKKAISEMSARSCI 751


>gi|388510652|gb|AFK43392.1| unknown [Medicago truncatula]
          Length = 233

 Score =  132 bits (332), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 130/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNAKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  107 bits (267), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 73/218 (33%), Positives = 122/218 (55%), Gaps = 8/218 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+  K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNAKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
           +   L   G+QL++ +TLA Y+I++   L ++  ++  
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 228


>gi|225709684|gb|ACO10688.1| Ubiquitin [Caligus rogercresseyi]
          Length = 229

 Score =  132 bits (332), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKTKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  107 bits (267), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 74/216 (34%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKTKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 226


>gi|323303927|gb|EGA57707.1| Ubi4p [Saccharomyces cerevisiae FostersB]
          Length = 248

 Score =  132 bits (332), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKXLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  116 bits (290), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 81/235 (34%), Positives = 133/235 (56%), Gaps = 10/235 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+ LE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKXLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEV 229
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEV 245


>gi|324520160|gb|ADY47572.1| Polyubiquitin-A, partial [Ascaris suum]
          Length = 354

 Score =  132 bits (332), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  129 bits (325), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 89/248 (35%), Positives = 142/248 (57%), Gaps = 10/248 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 250

Query: 235 VRDVKDKL 242
           + +VK K+
Sbjct: 251 IENVKAKI 258



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 63/172 (36%), Positives = 98/172 (56%), Gaps = 7/172 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVE 168
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQ 259



 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/100 (39%), Positives = 59/100 (59%), Gaps = 6/100 (6%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 167 LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREG 97
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EG
Sbjct: 225 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEG 263


>gi|325302882|tpg|DAA34473.1| TPA_exp: ubiquitin [Amblyomma variegatum]
          Length = 241

 Score =  132 bits (332), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 2   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 60

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 61  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 119

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 120 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 179

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 180 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 222



 Score =  112 bits (280), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 80/229 (34%), Positives = 129/229 (56%), Gaps = 10/229 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 16  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 73

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 74  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 132

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 133 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 191

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGR 223
           +   L   G+QL++ +TL+ Y+I++   L +   ++    IFVK L G+
Sbjct: 192 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLGLRLRGGMQIFVKTLTGK 240



 Score = 64.7 bits (156), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 34/70 (48%), Positives = 44/70 (62%)

Query: 212 KHSIFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASY 271
           K  IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+F  +QLED R L+ Y
Sbjct: 1   KMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 60

Query: 272 KIVNESIVNL 281
            I  ES ++L
Sbjct: 61  NIQKESTLHL 70


>gi|242096698|ref|XP_002438839.1| hypothetical protein SORBIDRAFT_10g027030 [Sorghum bicolor]
 gi|241917062|gb|EER90206.1| hypothetical protein SORBIDRAFT_10g027030 [Sorghum bicolor]
          Length = 229

 Score =  132 bits (332), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  +S ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKDSTLHL 221



 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 73/216 (33%), Positives = 124/216 (57%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TLA Y+I+++  L ++  ++
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKDSTLHLVLRLR 226


>gi|221048065|gb|ACL98140.1| ubiquitin C variant [Epinephelus coioides]
          Length = 255

 Score =  132 bits (332), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  127 bits (319), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 88/245 (35%), Positives = 140/245 (57%), Gaps = 10/245 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 250

Query: 235 VRDVK 239
           + +VK
Sbjct: 251 IENVK 255


>gi|158753|gb|AAA28997.1| ubiquitin [Drosophila melanogaster]
          Length = 231

 Score =  132 bits (332), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 75/219 (34%), Positives = 124/219 (56%), Gaps = 8/219 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSI 215
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  I
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGI 229


>gi|225711930|gb|ACO11811.1| Ubiquitin [Lepeophtheirus salmonis]
          Length = 229

 Score =  132 bits (332), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 130/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKEPTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL+  +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEGGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  106 bits (265), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 73/218 (33%), Positives = 122/218 (55%), Gaps = 8/218 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I     +H    
Sbjct: 15  LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEPTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEGGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 228


>gi|49586|emb|CAA30815.1| unnamed protein product [Cricetulus sp.]
          Length = 223

 Score =  132 bits (332), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  107 bits (267), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 74/212 (34%), Positives = 121/212 (57%), Gaps = 8/212 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQII 208
           +   L   G+QL++ +TL+ Y+I++   L ++
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 222


>gi|350537977|ref|NP_001232075.1| putative ubiquitin C variant 2 [Taeniopygia guttata]
 gi|197129056|gb|ACH45554.1| putative ubiquitin C variant 2 [Taeniopygia guttata]
          Length = 248

 Score =  132 bits (332), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  108 bits (269), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 74/219 (33%), Positives = 124/219 (56%), Gaps = 8/219 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSI 215
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  +
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 229


>gi|410976446|ref|XP_003994631.1| PREDICTED: polyubiquitin-B-like [Felis catus]
          Length = 229

 Score =  132 bits (332), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKGKIQEKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  107 bits (268), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 74/219 (33%), Positives = 124/219 (56%), Gaps = 8/219 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKGKIQEK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSI 215
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  +
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGV 229


>gi|324525461|gb|ADY48550.1| Polyubiquitin, partial [Ascaris suum]
          Length = 263

 Score =  132 bits (332), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+L+ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQLFVKTLTG-KTITLEVEPSDTIENVKVKIQDKEGIPPDQQRLIFAGKQLEDGRTLLDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ + LEV   D V+ V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTLTLEVEPSDAVQHV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLEDDR L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDDRTLSDYNIQKESTLHL 221



 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 75/221 (33%), Positives = 125/221 (56%), Gaps = 8/221 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K++I  K  E I  D   L +AG+QLE+G T++DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKVKIQDK--EGIPPDQQRLIFAGKQLEDGRTLLDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  +  V  VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTLTLEVEPSDAVQHVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSIFV 217
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  + V
Sbjct: 191 DQQRLIFAGKQLEDDRTLSDYNIQKESTLHLVLRLRGGVRV 231


>gi|195587564|ref|XP_002083531.1| GD13314 [Drosophila simulans]
 gi|194195540|gb|EDX09116.1| GD13314 [Drosophila simulans]
          Length = 300

 Score =  132 bits (332), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 93/259 (35%), Positives = 146/259 (56%), Gaps = 10/259 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKGKIQDK--EGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPDSQ 253
           + +VK K+  + G  PD Q
Sbjct: 251 IENVKAKIQDKEGIPPDQQ 269



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKGKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221


>gi|67616274|ref|XP_667472.1| ubiquitin B [Cryptosporidium hominis TU502]
 gi|54658618|gb|EAL37248.1| ubiquitin B [Cryptosporidium hominis]
          Length = 229

 Score =  132 bits (332), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  107 bits (268), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 74/219 (33%), Positives = 124/219 (56%), Gaps = 8/219 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSI 215
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  +
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 229


>gi|324525469|gb|ADY48551.1| Polyubiquitin, partial [Ascaris suum]
          Length = 263

 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+L+ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQLFVKTLTG-KTITLEVEPSDTIENVKVKIQDKEGIPPDQQRLIFAGKQLEDGRTLLDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ + LEV   D V+ V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTLTLEVEPSDAVQHV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLEDDR L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDDRTLSDYNIQKESTLHL 221



 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 75/221 (33%), Positives = 125/221 (56%), Gaps = 8/221 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K++I  K  E I  D   L +AG+QLE+G T++DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKVKIQDK--EGIPPDQQRLIFAGKQLEDGRTLLDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  +  V  VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTLTLEVEPSDAVQHVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSIFV 217
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  + V
Sbjct: 191 DQQRLIFAGKQLEDDRTLSDYNIQKESTLHLVLRLRGGVRV 231


>gi|226477454|emb|CAX72421.1| ubiquitin C [Schistosoma japonicum]
 gi|226477456|emb|CAX72422.1| ubiquitin C [Schistosoma japonicum]
 gi|226477458|emb|CAX72423.1| ubiquitin C [Schistosoma japonicum]
 gi|226477460|emb|CAX72424.1| ubiquitin C [Schistosoma japonicum]
 gi|226477462|emb|CAX72425.1| ubiquitin C [Schistosoma japonicum]
 gi|226477464|emb|CAX72426.1| ubiquitin C [Schistosoma japonicum]
 gi|226484015|emb|CAX79676.1| ubiquitin C [Schistosoma japonicum]
 gi|226484017|emb|CAX79677.1| ubiquitin C [Schistosoma japonicum]
 gi|226484019|emb|CAX79678.1| ubiquitin C [Schistosoma japonicum]
 gi|226484021|emb|CAX79679.1| ubiquitin C [Schistosoma japonicum]
 gi|226484023|emb|CAX79680.1| ubiquitin C [Schistosoma japonicum]
 gi|226484027|emb|CAX79682.1| ubiquitin C [Schistosoma japonicum]
 gi|226484029|emb|CAX79683.1| ubiquitin C [Schistosoma japonicum]
 gi|226484031|emb|CAX79684.1| ubiquitin C [Schistosoma japonicum]
 gi|226484033|emb|CAX79685.1| ubiquitin C [Schistosoma japonicum]
 gi|226484035|emb|CAX79686.1| ubiquitin C [Schistosoma japonicum]
 gi|226484037|emb|CAX79687.1| ubiquitin C [Schistosoma japonicum]
 gi|226484039|emb|CAX79688.1| ubiquitin C [Schistosoma japonicum]
 gi|226484041|emb|CAX79689.1| ubiquitin C [Schistosoma japonicum]
 gi|226484043|emb|CAX79690.1| ubiquitin C [Schistosoma japonicum]
 gi|226484045|emb|CAX79691.1| ubiquitin C [Schistosoma japonicum]
 gi|226484049|emb|CAX79693.1| ubiquitin C [Schistosoma japonicum]
 gi|226484051|emb|CAX79694.1| ubiquitin C [Schistosoma japonicum]
 gi|226484053|emb|CAX79695.1| ubiquitin C [Schistosoma japonicum]
 gi|226484081|emb|CAX79709.1| ubiquitin C [Schistosoma japonicum]
 gi|443725027|gb|ELU12769.1| hypothetical protein CAPTEDRAFT_192594 [Capitella teleta]
          Length = 229

 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  108 bits (269), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 74/219 (33%), Positives = 124/219 (56%), Gaps = 8/219 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSI 215
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  +
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGL 229


>gi|46128781|ref|XP_388944.1| hypothetical protein FG08768.1 [Gibberella zeae PH-1]
 gi|189190970|ref|XP_001931824.1| ubiquitin [Pyrenophora tritici-repentis Pt-1C-BFP]
 gi|330938030|ref|XP_003305664.1| hypothetical protein PTT_18575 [Pyrenophora teres f. teres 0-1]
 gi|398405616|ref|XP_003854274.1| hypothetical protein MYCGRDRAFT_57170 [Zymoseptoria tritici IPO323]
 gi|187973430|gb|EDU40929.1| ubiquitin [Pyrenophora tritici-repentis Pt-1C-BFP]
 gi|311317170|gb|EFQ86204.1| hypothetical protein PTT_18575 [Pyrenophora teres f. teres 0-1]
 gi|339474157|gb|EGP89250.1| hypothetical protein MYCGRDRAFT_57170 [Zymoseptoria tritici IPO323]
 gi|344301515|gb|EGW31827.1| polyubiquitin [Spathaspora passalidarum NRRL Y-27907]
 gi|346970979|gb|EGY14431.1| ubiquitin [Verticillium dahliae VdLs.17]
 gi|358394958|gb|EHK44351.1| hypothetical protein TRIATDRAFT_300588 [Trichoderma atroviride IMI
           206040]
 gi|401882407|gb|EJT46666.1| hypothetical protein A1Q1_04737 [Trichosporon asahii var. asahii
           CBS 2479]
 gi|408390396|gb|EKJ69797.1| hypothetical protein FPSE_10045 [Fusarium pseudograminearum CS3096]
 gi|429860337|gb|ELA35078.1| ubiquitin [Colletotrichum gloeosporioides Nara gc5]
 gi|449302308|gb|EMC98317.1| hypothetical protein BAUCODRAFT_32336 [Baudoinia compniacensis UAMH
           10762]
 gi|452843190|gb|EME45125.1| hypothetical protein DOTSEDRAFT_70987 [Dothistroma septosporum
           NZE10]
          Length = 229

 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 72/216 (33%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 226


>gi|195469924|ref|XP_002099886.1| GE16472 [Drosophila yakuba]
 gi|194187410|gb|EDX00994.1| GE16472 [Drosophila yakuba]
          Length = 230

 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  107 bits (267), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 74/216 (34%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 226


>gi|291413653|ref|XP_002723083.1| PREDICTED: ubiquitin B [Oryctolagus cuniculus]
 gi|55977015|gb|AAV68344.1| ubiquitin C splice variant [Homo sapiens]
 gi|357610605|gb|EHJ67056.1| putative ubiquitin C variant 2 [Danaus plexippus]
          Length = 229

 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  108 bits (270), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 74/219 (33%), Positives = 124/219 (56%), Gaps = 8/219 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSI 215
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  +
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGV 229


>gi|356545971|ref|XP_003541406.1| PREDICTED: polyubiquitin-like [Glycine max]
          Length = 269

 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 40  MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 98

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 99  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 157

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 158 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 217

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 218 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 260



 Score =  107 bits (268), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 74/220 (33%), Positives = 124/220 (56%), Gaps = 8/220 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 54  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 111

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 112 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 170

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 171 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 229

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSIF 216
           +   L   G+QL++ +TLA Y+I++   L ++  ++   F
Sbjct: 230 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGDF 269



 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 37/77 (48%), Positives = 46/77 (59%)

Query: 205 LQIIRHVKHSIFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLED 264
           L II      IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+F  +QLED
Sbjct: 32  LSIILVFNMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 91

Query: 265 DRNLASYKIVNESIVNL 281
            R LA Y I  ES ++L
Sbjct: 92  GRTLADYNIQKESTLHL 108


>gi|226477450|emb|CAX72419.1| polyubiquitin [Schistosoma japonicum]
          Length = 245

 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  115 bits (288), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 81/231 (35%), Positives = 131/231 (56%), Gaps = 10/231 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYI 225
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTI 241


>gi|289740633|gb|ADD19064.1| ubiquitin/40S ribosomal protein S27a fusion protein [Glossina
           morsitans morsitans]
          Length = 229

 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 75/219 (34%), Positives = 124/219 (56%), Gaps = 8/219 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSI 215
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  I
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGI 229


>gi|14596193|gb|AAK68824.1| Unknown protein [Arabidopsis thaliana]
          Length = 229

 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKPLPGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  107 bits (267), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 72/218 (33%), Positives = 122/218 (55%), Gaps = 8/218 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQT-PTSTVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+  P  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKPLPGKTITLEVESSDTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
           +   L   G+QL++ +TLA Y+I++   L ++  ++  
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 228


>gi|357512381|ref|XP_003626479.1| Ubiquitin-like protein [Medicago truncatula]
 gi|355501494|gb|AES82697.1| Ubiquitin-like protein [Medicago truncatula]
          Length = 277

 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 49  MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 107

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 108 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 166

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 167 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 226

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 227 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 269



 Score =  107 bits (266), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 73/212 (34%), Positives = 121/212 (57%), Gaps = 8/212 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 63  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 120

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 121 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 179

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 180 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 238

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQII 208
           +   L   G+QL++ +TLA Y+I++   L ++
Sbjct: 239 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 270



 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 36/85 (42%), Positives = 50/85 (58%)

Query: 197 YDIKENEVLQIIRHVKHSIFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           +  +E +   +   +K  IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+
Sbjct: 33  FRCREKKKKTLTHRIKMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 92

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F  +QLED R LA Y I  ES ++L
Sbjct: 93  FAGKQLEDGRTLADYNIQKESTLHL 117


>gi|11024714|ref|NP_061828.1| polyubiquitin-B precursor [Homo sapiens]
 gi|57114099|ref|NP_001009117.1| polyubiquitin-B [Pan troglodytes]
 gi|157427740|ref|NP_001098779.1| ubiquitin [Sus scrofa]
 gi|302563653|ref|NP_001181737.1| polyubiquitin-B [Macaca mulatta]
 gi|109113442|ref|XP_001087796.1| PREDICTED: ubiquitin D-like isoform 1 [Macaca mulatta]
 gi|109113444|ref|XP_001088043.1| PREDICTED: ubiquitin D-like isoform 3 [Macaca mulatta]
 gi|109113446|ref|XP_001087919.1| PREDICTED: ubiquitin D-like isoform 2 [Macaca mulatta]
 gi|296201638|ref|XP_002748114.1| PREDICTED: polyubiquitin-B-like isoform 1 [Callithrix jacchus]
 gi|296201640|ref|XP_002748115.1| PREDICTED: polyubiquitin-B-like isoform 2 [Callithrix jacchus]
 gi|296201642|ref|XP_002748116.1| PREDICTED: polyubiquitin-B-like isoform 3 [Callithrix jacchus]
 gi|297272002|ref|XP_002800358.1| PREDICTED: ubiquitin D-like [Macaca mulatta]
 gi|297272004|ref|XP_002800359.1| PREDICTED: ubiquitin D-like [Macaca mulatta]
 gi|297272006|ref|XP_002800360.1| PREDICTED: ubiquitin D-like [Macaca mulatta]
 gi|297272009|ref|XP_002800361.1| PREDICTED: ubiquitin D-like [Macaca mulatta]
 gi|297700142|ref|XP_002827118.1| PREDICTED: polyubiquitin-B isoform 2 [Pongo abelii]
 gi|301617759|ref|XP_002938289.1| PREDICTED: ubiquitin D isoform 1 [Xenopus (Silurana) tropicalis]
 gi|301617761|ref|XP_002938290.1| PREDICTED: ubiquitin D isoform 2 [Xenopus (Silurana) tropicalis]
 gi|332226973|ref|XP_003262663.1| PREDICTED: polyubiquitin-B isoform 2 [Nomascus leucogenys]
 gi|332267429|ref|XP_003282687.1| PREDICTED: polyubiquitin-B-like isoform 2 [Nomascus leucogenys]
 gi|332267433|ref|XP_003282689.1| PREDICTED: polyubiquitin-B-like isoform 4 [Nomascus leucogenys]
 gi|348560904|ref|XP_003466253.1| PREDICTED: polyubiquitin-B-like [Cavia porcellus]
 gi|390463130|ref|XP_003732975.1| PREDICTED: polyubiquitin-B-like [Callithrix jacchus]
 gi|395748608|ref|XP_003778797.1| PREDICTED: polyubiquitin-B [Pongo abelii]
 gi|426349328|ref|XP_004042260.1| PREDICTED: polyubiquitin-B isoform 1 [Gorilla gorilla gorilla]
 gi|426349330|ref|XP_004042261.1| PREDICTED: polyubiquitin-B isoform 2 [Gorilla gorilla gorilla]
 gi|426349332|ref|XP_004042262.1| PREDICTED: polyubiquitin-B isoform 3 [Gorilla gorilla gorilla]
 gi|426349334|ref|XP_004042263.1| PREDICTED: polyubiquitin-B isoform 4 [Gorilla gorilla gorilla]
 gi|426349336|ref|XP_004042264.1| PREDICTED: polyubiquitin-B isoform 5 [Gorilla gorilla gorilla]
 gi|426349338|ref|XP_004042265.1| PREDICTED: polyubiquitin-B isoform 6 [Gorilla gorilla gorilla]
 gi|426349340|ref|XP_004042266.1| PREDICTED: polyubiquitin-B isoform 7 [Gorilla gorilla gorilla]
 gi|441661901|ref|XP_004091551.1| PREDICTED: polyubiquitin-B [Nomascus leucogenys]
 gi|441661906|ref|XP_004091552.1| PREDICTED: polyubiquitin-B [Nomascus leucogenys]
 gi|441661909|ref|XP_004091553.1| PREDICTED: polyubiquitin-B [Nomascus leucogenys]
 gi|441678730|ref|XP_004092833.1| PREDICTED: polyubiquitin-B-like [Nomascus leucogenys]
 gi|441678733|ref|XP_004092834.1| PREDICTED: polyubiquitin-B-like [Nomascus leucogenys]
 gi|441678738|ref|XP_004092835.1| PREDICTED: polyubiquitin-B-like [Nomascus leucogenys]
 gi|302595874|sp|P0CG67.1|UBB_GORGO RecName: Full=Polyubiquitin-B; Contains: RecName: Full=Ubiquitin;
           Flags: Precursor
 gi|302595875|sp|P0CG47.1|UBB_HUMAN RecName: Full=Polyubiquitin-B; Contains: RecName: Full=Ubiquitin;
           Flags: Precursor
 gi|302595877|sp|P0CG65.1|UBB_PANTR RecName: Full=Polyubiquitin-B; Contains: RecName: Full=Ubiquitin;
           Flags: Precursor
 gi|302595878|sp|P0CG60.1|UBB_PONPY RecName: Full=Polyubiquitin-B; Contains: RecName: Full=Ubiquitin;
           Flags: Precursor
 gi|6647298|emb|CAA28495.1| ubiquitin [Homo sapiens]
 gi|12653221|gb|AAH00379.1| Ubiquitin B [Homo sapiens]
 gi|14424552|gb|AAH09301.1| Ubiquitin B [Homo sapiens]
 gi|15451313|dbj|BAB64460.1| hypothetical protein [Macaca fascicularis]
 gi|15929389|gb|AAH15127.1| Ubiquitin B [Homo sapiens]
 gi|20070823|gb|AAH26301.1| Ubiquitin B [Homo sapiens]
 gi|21410249|gb|AAH31027.1| Ubiquitin B [Homo sapiens]
 gi|28278206|gb|AAH46123.1| Ubiquitin B [Homo sapiens]
 gi|28316344|dbj|BAC56955.1| polyubiquitin B [Homo sapiens]
 gi|28316346|dbj|BAC56956.1| polyubiquitin B [Pongo pygmaeus]
 gi|28316348|dbj|BAC56957.1| polyubiquitin B [Pan troglodytes]
 gi|28316350|dbj|BAC56958.1| polyubiquitin B [Gorilla gorilla]
 gi|54697070|gb|AAV38907.1| ubiquitin B [Homo sapiens]
 gi|54887368|gb|AAH38999.1| Ubiquitin B [Homo sapiens]
 gi|61355410|gb|AAX41137.1| ubiquitin B [synthetic construct]
 gi|61359496|gb|AAX41727.1| ubiquitin B [synthetic construct]
 gi|119624906|gb|EAX04501.1| ubiquitin B, isoform CRA_a [Homo sapiens]
 gi|119624907|gb|EAX04502.1| ubiquitin B, isoform CRA_a [Homo sapiens]
 gi|156105183|gb|ABU49130.1| ubiquitin B [Sus scrofa]
 gi|156105185|gb|ABU49131.1| ubiquitin B [Sus scrofa]
 gi|281339566|gb|EFB15150.1| hypothetical protein PANDA_009728 [Ailuropoda melanoleuca]
 gi|343958162|dbj|BAK62936.1| ubiquitin [Pan troglodytes]
          Length = 229

 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  107 bits (267), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 74/216 (34%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 226


>gi|365986434|ref|XP_003670049.1| hypothetical protein NDAI_0D04930 [Naumovozyma dairenensis CBS 421]
 gi|410082970|ref|XP_003959063.1| hypothetical protein KAFR_0I01470 [Kazachstania africana CBS 2517]
 gi|444321755|ref|XP_004181533.1| hypothetical protein TBLA_0G00670 [Tetrapisispora blattae CBS 6284]
 gi|343768818|emb|CCD24806.1| hypothetical protein NDAI_0D04930 [Naumovozyma dairenensis CBS 421]
 gi|372465653|emb|CCF59928.1| hypothetical protein KAFR_0I01470 [Kazachstania africana CBS 2517]
 gi|387514578|emb|CCH62014.1| hypothetical protein TBLA_0G00670 [Tetrapisispora blattae CBS 6284]
          Length = 229

 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 72/219 (32%), Positives = 124/219 (56%), Gaps = 8/219 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSI 215
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  +
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 229


>gi|213510698|ref|NP_001133175.1| polyubiquitin [Salmo salar]
 gi|350534516|ref|NP_001232808.1| uncharacterized protein LOC100228572 [Taeniopygia guttata]
 gi|118098426|ref|XP_415105.2| PREDICTED: polyubiquitin-B isoform 2 [Gallus gallus]
 gi|118098428|ref|XP_001233377.1| PREDICTED: polyubiquitin-B isoform 1 [Gallus gallus]
 gi|432884643|ref|XP_004074520.1| PREDICTED: polyubiquitin-B-like isoform 1 [Oryzias latipes]
 gi|432884645|ref|XP_004074521.1| PREDICTED: polyubiquitin-B-like isoform 2 [Oryzias latipes]
 gi|432884647|ref|XP_004074522.1| PREDICTED: polyubiquitin-B-like isoform 3 [Oryzias latipes]
 gi|432884649|ref|XP_004074523.1| PREDICTED: polyubiquitin-B-like isoform 4 [Oryzias latipes]
 gi|449476588|ref|XP_004176460.1| PREDICTED: polyubiquitin-B [Taeniopygia guttata]
 gi|104829|pir||S13928 ubiquitin precursor - chicken
 gi|533889|gb|AAA29362.1| polyubiquitin [Anopheles gambiae]
 gi|197129058|gb|ACH45556.1| putative ubiquitin C variant 4 [Taeniopygia guttata]
 gi|197632335|gb|ACH70891.1| polyubiquitin [Salmo salar]
 gi|223647274|gb|ACN10395.1| Ubiquitin [Salmo salar]
 gi|223673153|gb|ACN12758.1| Ubiquitin [Salmo salar]
 gi|449279318|gb|EMC86953.1| Ubiquitin [Columba livia]
          Length = 229

 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  107 bits (267), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 74/216 (34%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 226


>gi|256072199|ref|XP_002572424.1| ubiquitin (ribosomal protein L40) [Schistosoma mansoni]
 gi|164510084|emb|CAJ32646.1| ubiquitin [Xantho incisus]
 gi|226473060|emb|CAX71216.1| polyubiquitin [Schistosoma japonicum]
          Length = 228

 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  107 bits (267), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 74/216 (34%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 226


>gi|307193107|gb|EFN76024.1| Ubiquitin [Harpegnathos saltator]
          Length = 229

 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ +T +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVRTLAG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 74/216 (34%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 226


>gi|169607224|ref|XP_001797032.1| hypothetical protein SNOG_06667 [Phaeosphaeria nodorum SN15]
 gi|111065378|gb|EAT86498.1| hypothetical protein SNOG_06667 [Phaeosphaeria nodorum SN15]
          Length = 234

 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 75/228 (32%), Positives = 127/228 (55%), Gaps = 16/228 (7%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSIFVKLLNGRY 224
           +   L   G+QL++ +TL+ Y+I++   L ++        ++L  G+Y
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV--------LRLRGGQY 230


>gi|12833702|dbj|BAB22630.1| unnamed protein product [Mus musculus]
          Length = 229

 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  107 bits (267), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 74/216 (34%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 226


>gi|61369554|gb|AAX43350.1| ubiquitin B [synthetic construct]
          Length = 230

 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  107 bits (267), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 74/220 (33%), Positives = 123/220 (55%), Gaps = 8/220 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSIF 216
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGCL 230


>gi|336271700|ref|XP_003350608.1| hypothetical protein SMAC_07925 [Sordaria macrospora k-hell]
 gi|380089527|emb|CCC12626.1| unnamed protein product [Sordaria macrospora k-hell]
          Length = 229

 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 132/223 (59%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK+ ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKQKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 72/216 (33%), Positives = 124/216 (57%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKQKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK+ ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKQKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 226


>gi|156087036|ref|XP_001610925.1| polyubiquitin [Babesia bovis T2Bo]
 gi|154798178|gb|EDO07357.1| polyubiquitin, putative [Babesia bovis]
          Length = 233

 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  107 bits (267), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 74/223 (33%), Positives = 126/223 (56%), Gaps = 8/223 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSIFVKL 219
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    +++
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGKVIEI 233


>gi|302393782|sp|P23324.2|UBIQP_EUPEU RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
           Flags: Precursor
 gi|159038|gb|AAA62225.1| ubiquitin [Euplotes eurystomus]
          Length = 229

 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 133/223 (59%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L   +SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLDVEQSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ L+V ++ T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEQSDTIDNVKTKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I L+V + DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEQSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  107 bits (267), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 72/218 (33%), Positives = 124/218 (56%), Gaps = 8/218 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V++++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LDVEQSDTIDNVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L   +SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLDVEQSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ L+V ++ T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEQSDTIDNVKTKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
           +   L   G+QL++ +TLA Y+I++   L ++  ++  
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 228


>gi|365764258|gb|EHN05782.1| Ubi4p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
 gi|452984043|gb|EME83800.1| hypothetical protein MYCFIDRAFT_60610 [Pseudocercospora fijiensis
           CIRAD86]
          Length = 229

 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  105 bits (263), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 72/216 (33%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 226


>gi|110671522|gb|ABG82012.1| putative ubiquitin B [Diaphorina citri]
 gi|387019647|gb|AFJ51941.1| putative ubiquitin B [Crotalus adamanteus]
          Length = 229

 Score =  132 bits (331), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  107 bits (267), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 74/218 (33%), Positives = 123/218 (56%), Gaps = 8/218 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 228


>gi|443713356|gb|ELU06246.1| hypothetical protein CAPTEDRAFT_186294 [Capitella teleta]
          Length = 231

 Score =  131 bits (330), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  106 bits (265), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 74/214 (34%), Positives = 121/214 (56%), Gaps = 8/214 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRH 210
           +   L   G+QL++ +TL+ Y+I++   L + + 
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLCQR 224


>gi|357440433|ref|XP_003590494.1| Ubiquitin [Medicago truncatula]
 gi|355479542|gb|AES60745.1| Ubiquitin [Medicago truncatula]
          Length = 312

 Score =  131 bits (330), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  107 bits (266), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 73/212 (34%), Positives = 121/212 (57%), Gaps = 8/212 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQII 208
           +   L   G+QL++ +TLA Y+I++   L ++
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 222


>gi|68472143|ref|XP_719867.1| hypothetical protein CaO19.6771 [Candida albicans SC5314]
 gi|68472378|ref|XP_719750.1| hypothetical protein CaO19.14063 [Candida albicans SC5314]
 gi|3687425|emb|CAA76783.1| polyubiquitin [Candida albicans]
 gi|46441582|gb|EAL00878.1| hypothetical protein CaO19.14063 [Candida albicans SC5314]
 gi|46441708|gb|EAL01003.1| hypothetical protein CaO19.6771 [Candida albicans SC5314]
 gi|238881109|gb|EEQ44747.1| hypothetical protein CAWG_03035 [Candida albicans WO-1]
 gi|354545623|emb|CCE42351.1| hypothetical protein CPAR2_809000 [Candida parapsilosis]
          Length = 229

 Score =  131 bits (330), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  105 bits (263), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 72/216 (33%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 226


>gi|440796241|gb|ELR17350.1| polyubiquitin, putative [Acanthamoeba castellanii str. Neff]
          Length = 220

 Score =  131 bits (330), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 86/223 (38%), Positives = 129/223 (57%), Gaps = 14/223 (6%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL +I         FV+T T  T+ LEV  + T+ +VK+ ++  +  IP +   
Sbjct: 60  NIQKESTLHLI---------FVKTLTGKTITLEVESSDTIENVKQKIQD-KEGIPPDQQR 109

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 110 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENV 169

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 170 KQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 212



 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 73/209 (34%), Positives = 116/209 (55%), Gaps = 11/209 (5%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIHNDSG 60
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIENVKQKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH---- 68

Query: 61  VMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDV 120
              L F      KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL  
Sbjct: 69  ---LIFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD 125

Query: 121 LNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDC 179
            NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK+ ++  +  IP +  
Sbjct: 126 YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKQKIQD-KEGIPPDQQ 184

Query: 180 ELFRGGEQLQNLKTLAYYDIKENEVLQII 208
            L   G+QL++ +TLA Y+I++   L ++
Sbjct: 185 RLIFAGKQLEDGRTLADYNIQKESTLHLV 213


>gi|66358028|ref|XP_626192.1| polyubiquitin with 3 Ub domains [Cryptosporidium parvum Iowa II]
 gi|46227264|gb|EAK88214.1| polyubiquitin with 3 Ub domains [Cryptosporidium parvum Iowa II]
          Length = 241

 Score =  131 bits (330), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 13  MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 71

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 72  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 130

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 131 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 190

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 191 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 233



 Score =  107 bits (268), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 74/219 (33%), Positives = 124/219 (56%), Gaps = 8/219 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 27  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 84

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 85  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 143

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 144 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 202

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSI 215
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  +
Sbjct: 203 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 241



 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 37/86 (43%), Positives = 49/86 (56%), Gaps = 8/86 (9%)

Query: 196 YYDIKENEVLQIIRHVKHSIFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRL 255
           Y D  +N  +QI        FVK L G+ I LEV   DT+ +VK K+  + G  PD QRL
Sbjct: 4   YRDCSKNTNMQI--------FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 55

Query: 256 VFKRQQLEDDRNLASYKIVNESIVNL 281
           +F  +QLED R L+ Y I  ES ++L
Sbjct: 56  IFAGKQLEDGRTLSDYNIQKESTLHL 81


>gi|149063232|gb|EDM13555.1| rCG21222, isoform CRA_a [Rattus norvegicus]
 gi|149063234|gb|EDM13557.1| rCG21222, isoform CRA_a [Rattus norvegicus]
          Length = 278

 Score =  131 bits (330), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  119 bits (297), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 85/245 (34%), Positives = 137/245 (55%), Gaps = 10/245 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I L+V     
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSVN 250

Query: 235 VRDVK 239
            + VK
Sbjct: 251 TKKVK 255



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 61/169 (36%), Positives = 94/169 (55%), Gaps = 7/169 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKK 165
           L   NI  E TL ++   +   +IFV+T T  T+ L+V  +     VK+
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSVNTKKVKQ 256


>gi|37595366|gb|AAQ94569.1| ubiquitin C [Danio rerio]
          Length = 235

 Score =  131 bits (330), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKPLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  107 bits (268), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 77/224 (34%), Positives = 126/224 (56%), Gaps = 10/224 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+  T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKPLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVK 218
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVK 234



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 55/148 (37%), Positives = 83/148 (56%), Gaps = 6/148 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ K P   KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVK-PLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQT 145
           L   NI  E TL ++   +   +IFV+T
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKT 235


>gi|226469792|emb|CAX76726.1| polyubiquitin [Schistosoma japonicum]
          Length = 228

 Score =  131 bits (330), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTISLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIPDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  106 bits (265), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 74/216 (34%), Positives = 122/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  +   +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTISLEVEPSDTIENVKAKIPD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 226


>gi|74214198|dbj|BAE40351.1| unnamed protein product [Mus musculus]
          Length = 278

 Score =  131 bits (330), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  121 bits (303), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 86/245 (35%), Positives = 138/245 (56%), Gaps = 10/245 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I L+V    T
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSVT 250

Query: 235 VRDVK 239
            + VK
Sbjct: 251 TKKVK 255



 Score = 86.7 bits (213), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 62/169 (36%), Positives = 95/169 (56%), Gaps = 7/169 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKK 165
           L   NI  E TL ++   +   +IFV+T T  T+ L+V  + T   VK+
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSVTTKKVKQ 256


>gi|226477468|emb|CAX72428.1| ubiquitin C [Schistosoma japonicum]
          Length = 229

 Score =  131 bits (330), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 130/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES + L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLPL 221



 Score =  107 bits (268), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 74/219 (33%), Positives = 124/219 (56%), Gaps = 8/219 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSI 215
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  +
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLPLVLRLRGGL 229


>gi|225715800|gb|ACO13746.1| Ubiquitin [Esox lucius]
          Length = 229

 Score =  131 bits (330), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDT+EN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTVENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  106 bits (265), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 73/216 (33%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ +E +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTVENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 226


>gi|73955934|ref|XP_536651.2| PREDICTED: polyubiquitin-B isoform 1 [Canis lupus familiaris]
 gi|345800303|ref|XP_003434677.1| PREDICTED: polyubiquitin-B [Canis lupus familiaris]
          Length = 229

 Score =  131 bits (329), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 130/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M ++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MPIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  107 bits (267), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 74/216 (34%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 226


>gi|402224638|gb|EJU04700.1| polyubiquitin UbiD/Ubi4 [Dacryopinax sp. DJM-731 SS1]
          Length = 229

 Score =  131 bits (329), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  106 bits (265), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 72/216 (33%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 226


>gi|302496049|ref|XP_003010029.1| polyubiquitin UbiD/Ubi4, putative [Arthroderma benhamiae CBS
           112371]
 gi|315043104|ref|XP_003170928.1| ubiquitin [Arthroderma gypseum CBS 118893]
 gi|327295188|ref|XP_003232289.1| polyubiquitin [Trichophyton rubrum CBS 118892]
 gi|291173564|gb|EFE29389.1| polyubiquitin UbiD/Ubi4, putative [Arthroderma benhamiae CBS
           112371]
 gi|311344717|gb|EFR03920.1| ubiquitin [Arthroderma gypseum CBS 118893]
 gi|326465461|gb|EGD90914.1| polyubiquitin [Trichophyton rubrum CBS 118892]
 gi|326473983|gb|EGD97992.1| polyubiquitin [Trichophyton tonsurans CBS 112818]
 gi|326480982|gb|EGE04992.1| ubiquitin [Trichophyton equinum CBS 127.97]
          Length = 229

 Score =  131 bits (329), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 72/216 (33%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 226


>gi|18398638|ref|NP_566357.1| polyubiquitin 8 [Arabidopsis thaliana]
 gi|75101960|sp|Q39256.1|UBQ8_ARATH RecName: Full=Polyubiquitin 8; Contains: RecName:
           Full=Ubiquitin-related 1; Contains: RecName:
           Full=Ubiquitin-related 2; Contains: RecName:
           Full=Ubiquitin-related 3; Contains: RecName:
           Full=Ubiquitin-related 4; Contains: RecName:
           Full=Ubiquitin-related 5; Contains: RecName:
           Full=Ubiquitin-related 6; Contains: RecName:
           Full=Ubiquitin-related 7; Contains: RecName:
           Full=Ubiquitin-related 8; Flags: Precursor
 gi|6681339|gb|AAF23256.1|AC015985_14 polyubiquitin (ubq8) [Arabidopsis thaliana]
 gi|6682255|gb|AAF23307.1|AC016661_32 polyubiquitin [Arabidopsis thaliana]
 gi|870794|gb|AAA68879.1| polyubiquitin [Arabidopsis thaliana]
 gi|332641292|gb|AEE74813.1| polyubiquitin 8 [Arabidopsis thaliana]
          Length = 631

 Score =  131 bits (329), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 100/292 (34%), Positives = 160/292 (54%), Gaps = 15/292 (5%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQL--ENGLTVIDYGIPNNSVIH-- 56
           +KV+ ++ IE +K +I  +  E +  D   L + G++L  E+  T+ DYGI N S +   
Sbjct: 174 LKVESSDTIENVKAKIQDR--EGLRPDHQRLIFHGEELFTEDNRTLADYGIRNRSTLCLA 231

Query: 57  -NDSGVMKLYFKT-PSNEKT---FELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKL 111
               G M ++ K  P N  T   F L+   SDTI+N+K  ++ +E IP+  + + + GK 
Sbjct: 232 LRLRGDMYIFVKNLPYNSFTGENFILEVESSDTIDNVKAKLQDKERIPMDLHRLIFAGKP 291

Query: 112 IESYITLDVLNINNEDTLQMISVPKELQEIFVQTPT-STVKLEVRRAHTVLDVKKMVESM 170
           +E   TL   NI    TL +++  +   +IFV+T T   + LEV    T+ +VK MV+  
Sbjct: 292 LEGGRTLAHYNIQKGSTLYLVTRFRCGMQIFVKTLTRKRINLEVESWDTIENVKAMVQDK 351

Query: 171 RICIPSEDCE-LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSIFVKLLNGRYIILEV 229
               P  + + L   G++L++  TLA Y I++   L ++  ++  IFVKL  G+ I LEV
Sbjct: 352 EGIQPQPNLQRLIFLGKELKDGCTLADYSIQKESTLHLVLGMQ--IFVKLFGGKIITLEV 409

Query: 230 AKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
              DT++ VK K+  ++G  PD Q L+F+  QL+D R L  Y I NES ++L
Sbjct: 410 LSSDTIKSVKAKIQDKVGSPPDQQILLFRGGQLQDGRTLGDYNIRNESTLHL 461



 Score =  116 bits (290), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 92/291 (31%), Positives = 151/291 (51%), Gaps = 13/291 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIHNDSG 60
           ++V+  + IE +K  +  K   +   +L  L + G++L++G T+ DY I   S +H   G
Sbjct: 333 LEVESWDTIENVKAMVQDKEGIQPQPNLQRLIFLGKELKDGCTLADYSIQKESTLHLVLG 392

Query: 61  VMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDV 120
            M+++ K     K   L+   SDTI+++K  I+ + G P  +  + + G  ++   TL  
Sbjct: 393 -MQIFVKLFGG-KIITLEVLSSDTIKSVKAKIQDKVGSPPDQQILLFRGGQLQDGRTLGD 450

Query: 121 LNINNEDTLQMISVPKELQEIFV-------QTPTS-TVKLEVRRAHTVLDVKKMVESMRI 172
            NI NE TL +    +   +IFV       +TPT  T+ LEV  + T+ +VK  ++  ++
Sbjct: 451 YNIRNESTLHLFFHIRHGMQIFVKTFSFSGETPTCKTITLEVESSDTIDNVKVKIQH-KV 509

Query: 173 CIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQ--IIRHVKHSIFVKLLNGRYIILEVA 230
            IP +   L  GG  L   +TL  Y+I++   +    ++     IF+K L G+ IILEV 
Sbjct: 510 GIPLDRQRLIFGGRVLVGSRTLLDYNIQKGSTIHQLFLQRGGMQIFIKTLTGKTIILEVE 569

Query: 231 KFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
             DT+ +VK+K+  + G  PD Q L+F  QQLED   L  Y I  +S + L
Sbjct: 570 SSDTIANVKEKIQVKEGIKPDQQMLIFFGQQLEDGVTLGDYDIHKKSTLYL 620



 Score =  115 bits (288), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 80/232 (34%), Positives = 130/232 (56%), Gaps = 12/232 (5%)

Query: 61  VMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDV 120
            +++Y KT + EKT  L    SD+I N+K  I+ +EGIP+ +  + + GK +E  +TL  
Sbjct: 2   TIQIYAKTLT-EKTITLDVETSDSIHNVKAKIQNKEGIPLDQQRLIFAGKQLEDGLTLAD 60

Query: 121 LNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDC 179
            NI  E TL ++   +   +IFVQT T  T+ LEV+ + T+ +VK  ++     +P +  
Sbjct: 61  YNIQKESTLHLVLRLRGGMQIFVQTLTGKTITLEVKSSDTIDNVKAKIQDKEGILPRQQR 120

Query: 180 ELFRGGEQLQNLKTLAYYDIKENEVLQIIRHV--KHSIFVKLLNGR-----YIILEVAKF 232
            +F  G+QL++ +TLA Y+I++   L ++  +     IFV   +G+      + L+V   
Sbjct: 121 LIF-AGKQLEDGRTLADYNIQKESTLHLVLRLCGGMQIFVSTFSGKNFTSDTLTLKVESS 179

Query: 233 DTVRDVKDKLFREIGQAPDSQRLVFKRQQL--EDDRNLASYKIVNESIVNLT 282
           DT+ +VK K+    G  PD QRL+F  ++L  ED+R LA Y I N S + L 
Sbjct: 180 DTIENVKAKIQDREGLRPDHQRLIFHGEELFTEDNRTLADYGIRNRSTLCLA 231



 Score =  110 bits (275), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 97/298 (32%), Positives = 147/298 (49%), Gaps = 20/298 (6%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ I  +K +I  K  E I  D   L +AG+QLE+GLT+ DY I   S +H    
Sbjct: 17  LDVETSDSIHNVKAKIQNK--EGIPLDQQRLIFAGKQLEDGLTLADYNIQKESTLHLVLR 74

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ +T +  KT  L+   SDTI+N+K  I+ +EGI   +  + + GK +E   T
Sbjct: 75  LRGGMQIFVQTLTG-KTITLEVKSSDTIDNVKAKIQDKEGILPRQQRLIFAGKQLEDGRT 133

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQT------PTSTVKLEVRRAHTVLDVKKMVESMR 171
           L   NI  E TL ++       +IFV T       + T+ L+V  + T+ +VK  ++   
Sbjct: 134 LADYNIQKESTLHLVLRLCGGMQIFVSTFSGKNFTSDTLTLKVESSDTIENVKAKIQDRE 193

Query: 172 ICIPSEDCELFRGGEQL-QNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLL-----NGR 223
              P     +F G E   ++ +TLA Y I+    L +   ++    IFVK L      G 
Sbjct: 194 GLRPDHQRLIFHGEELFTEDNRTLADYGIRNRSTLCLALRLRGDMYIFVKNLPYNSFTGE 253

Query: 224 YIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
             ILEV   DT+ +VK KL  +     D  RL+F  + LE  R LA Y I   S + L
Sbjct: 254 NFILEVESSDTIDNVKAKLQDKERIPMDLHRLIFAGKPLEGGRTLAHYNIQKGSTLYL 311



 Score = 84.0 bits (206), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 65/223 (29%), Positives = 116/223 (52%), Gaps = 13/223 (5%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V  ++ I+ +K +I  KV      D   L + G QL++G T+ DY I N S +H   +
Sbjct: 407 LEVLSSDTIKSVKAKIQDKVGSP--PDQQILLFRGGQLQDGRTLGDYNIRNESTLHLFFH 464

Query: 58  DSGVMKLYFKTPS------NEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKL 111
               M+++ KT S        KT  L+   SDTI+N+K  I+ + GIP+    + +GG++
Sbjct: 465 IRHGMQIFVKTFSFSGETPTCKTITLEVESSDTIDNVKVKIQHKVGIPLDRQRLIFGGRV 524

Query: 112 IESYITLDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESM 170
           +    TL   NI    T+  + + +   +IF++T T  T+ LEV  + T+ +VK+ ++  
Sbjct: 525 LVGSRTLLDYNIQKGSTIHQLFLQRGGMQIFIKTLTGKTIILEVESSDTIANVKEKIQVK 584

Query: 171 RICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKH 213
               P +   +F G +QL++  TL  YDI +   L ++  ++ 
Sbjct: 585 EGIKPDQQMLIFFG-QQLEDGVTLGDYDIHKKSTLYLVLRLRQ 626


>gi|355568283|gb|EHH24564.1| Polyubiquitin-C [Macaca mulatta]
          Length = 229

 Score =  131 bits (329), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 130/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  +     IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLSGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 74/216 (34%), Positives = 122/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++       +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLSGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 226


>gi|93359417|gb|ABF13286.1| polyubiquitin [Anser anser]
          Length = 265

 Score =  131 bits (329), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 130/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES  +L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTPHL 221



 Score =  125 bits (313), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 87/247 (35%), Positives = 140/247 (56%), Gaps = 10/247 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TL+ Y+I++     ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTPHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 250

Query: 235 VRDVKDK 241
           + +VK +
Sbjct: 251 IENVKAR 257


>gi|343485975|dbj|BAK61744.1| ubiquitin [Collozoum amoeboides]
          Length = 228

 Score =  130 bits (328), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 129/223 (57%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L    SDTI N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLDVESSDTISNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVESSDTISNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I L+V   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVESSDTISNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  105 bits (261), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 72/216 (33%), Positives = 119/216 (55%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ I  +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LDVESSDTISNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L    SDTI N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLDVESSDTISNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVESSDTISNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TLA Y+I++   L ++  ++
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 226


>gi|226477452|emb|CAX72420.1| polyubiquitin [Schistosoma japonicum]
          Length = 268

 Score =  130 bits (328), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 92/257 (35%), Positives = 145/257 (56%), Gaps = 10/257 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL + +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 191 DQQRLIFAGKQLGDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 250

Query: 235 VRDVKDKLFREIGQAPD 251
           + +VK K+  + G  PD
Sbjct: 251 IENVKAKIQDKEGIPPD 267



 Score =  129 bits (325), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 130/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QL D R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLGDGRTLSDYNIQKESTLHL 221


>gi|350537541|ref|NP_001232763.1| putative ubiquitin C variant 9 [Taeniopygia guttata]
 gi|197129065|gb|ACH45563.1| putative ubiquitin C variant 9 [Taeniopygia guttata]
          Length = 229

 Score =  130 bits (328), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTIILEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 74/218 (33%), Positives = 123/218 (56%), Gaps = 8/218 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTIILEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 228


>gi|111218908|gb|ABH08755.1| ubiquitin [Arabidopsis thaliana]
          Length = 221

 Score =  130 bits (328), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 82/212 (38%), Positives = 124/212 (58%), Gaps = 4/212 (1%)

Query: 73  KTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMI 132
           KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   NI  E TL ++
Sbjct: 3   KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 62

Query: 133 SVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNL 191
              +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ 
Sbjct: 63  LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQRLIFAGKQLEDG 121

Query: 192 KTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQA 249
           +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  
Sbjct: 122 RTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIP 181

Query: 250 PDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 182 PDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 213



 Score =  108 bits (269), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 73/212 (34%), Positives = 121/212 (57%), Gaps = 8/212 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 7   LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 64

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 65  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 123

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 124 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 182

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQII 208
           +   L   G+QL++ +TLA Y+I++   L ++
Sbjct: 183 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 214



 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 29/61 (47%), Positives = 38/61 (62%)

Query: 221 NGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVN 280
            G+ I LEV   DT+ +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++
Sbjct: 1   TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 60

Query: 281 L 281
           L
Sbjct: 61  L 61


>gi|399217583|emb|CCF74470.1| unnamed protein product [Babesia microti strain RI]
          Length = 282

 Score =  130 bits (327), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  107 bits (267), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 74/220 (33%), Positives = 124/220 (56%), Gaps = 8/220 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSIF 216
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  + 
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGVI 230


>gi|15284030|dbj|BAB63443.1| ubiquitin 2 [Physarum polycephalum]
 gi|19909902|dbj|BAB87824.1| polyubiquitin [Physarum polycephalum]
          Length = 229

 Score =  130 bits (327), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 129/223 (57%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIE++K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIESVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+  VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIESVKTKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+  V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIESV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  106 bits (265), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 73/216 (33%), Positives = 122/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIESVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIE++K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIESVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+  VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIESVKTKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 226


>gi|290984061|ref|XP_002674746.1| polyubiquitin [Naegleria gruberi]
 gi|284088338|gb|EFC42002.1| polyubiquitin [Naegleria gruberi]
          Length = 229

 Score =  130 bits (327), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 130/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   +DTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESNDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV    T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESNDTIENVKSKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESNDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  104 bits (260), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 73/216 (33%), Positives = 121/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+  + IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESNDTIENVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   +DTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESNDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV    T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESNDTIENVKSKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 226


>gi|226484047|emb|CAX79692.1| ubiquitin C [Schistosoma japonicum]
          Length = 229

 Score =  130 bits (327), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QL+D R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLKDGRTLSDYNIQKESTLHL 221



 Score =  108 bits (269), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 74/219 (33%), Positives = 124/219 (56%), Gaps = 8/219 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSI 215
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  +
Sbjct: 191 DQQRLIFAGKQLKDGRTLSDYNIQKESTLHLVLRLRGGL 229


>gi|226484025|emb|CAX79681.1| ubiquitin C [Schistosoma japonicum]
          Length = 229

 Score =  130 bits (327), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 130/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++      P +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGTPPDQQRL 119

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           +F  G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 120 IF-AGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 73/219 (33%), Positives = 123/219 (56%), Gaps = 8/219 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EG P  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGTPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSI 215
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  +
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGL 229


>gi|111218906|gb|ABH08754.1| ubiquitin [Arabidopsis thaliana]
          Length = 220

 Score =  130 bits (327), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 82/212 (38%), Positives = 124/212 (58%), Gaps = 4/212 (1%)

Query: 73  KTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMI 132
           KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   NI  E TL ++
Sbjct: 1   KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 60

Query: 133 SVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNL 191
              +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ 
Sbjct: 61  LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQRLIFAGKQLEDG 119

Query: 192 KTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQA 249
           +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  
Sbjct: 120 RTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIP 179

Query: 250 PDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 180 PDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 211



 Score =  110 bits (274), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 74/220 (33%), Positives = 124/220 (56%), Gaps = 8/220 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 5   LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 62

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 63  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 121

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 122 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 180

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSIF 216
           +   L   G+QL++ +TLA Y+I++   L ++  ++   F
Sbjct: 181 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGSF 220


>gi|156358391|ref|XP_001624503.1| predicted protein [Nematostella vectensis]
 gi|156211288|gb|EDO32403.1| predicted protein [Nematostella vectensis]
          Length = 229

 Score =  130 bits (327), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 130/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QR +F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRFIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  105 bits (263), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 73/216 (33%), Positives = 122/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +       G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 191 DQQRFIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 226


>gi|111218904|gb|ABH08753.1| ubiquitin [Arabidopsis thaliana]
          Length = 219

 Score =  130 bits (327), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 82/212 (38%), Positives = 124/212 (58%), Gaps = 4/212 (1%)

Query: 73  KTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMI 132
           KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   NI  E TL ++
Sbjct: 1   KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 60

Query: 133 SVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNL 191
              +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ 
Sbjct: 61  LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQRLIFAGKQLEDG 119

Query: 192 KTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQA 249
           +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  
Sbjct: 120 RTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIP 179

Query: 250 PDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 180 PDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 211



 Score =  108 bits (269), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 73/216 (33%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 5   LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 62

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 63  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 121

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 122 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 180

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TLA Y+I++   L ++  ++
Sbjct: 181 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 216


>gi|320163196|gb|EFW40095.1| polyubiquitin 5 [Capsaspora owczarzaki ATCC 30864]
          Length = 228

 Score =  130 bits (326), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 82/223 (36%), Positives = 130/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLDVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVESSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I L+V   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVESSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  107 bits (266), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 73/216 (33%), Positives = 121/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LDVESSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLDVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVESSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 226


>gi|312380774|gb|EFR26677.1| hypothetical protein AND_07080 [Anopheles darlingi]
          Length = 567

 Score =  130 bits (326), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 94/276 (34%), Positives = 151/276 (54%), Gaps = 20/276 (7%)

Query: 14  LRIHAKVEEE--ILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---NDSGVMKLYFKT 68
           L I +K+EE   I  D   + +AG+QLENG  + DY I + S +H      G M+++ + 
Sbjct: 24  LDIKSKIEEREGIDPDQQRIIFAGKQLENGRIISDYNIQHGSTMHLVLRLKGGMQIFVRM 83

Query: 69  PSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDT 128
            +  KT  +      T+E++K  I+ RE IP ++  + + GK +E   TL+  +I     
Sbjct: 84  LTG-KTIAIDTEPEATVESVKKQIDEREEIPPNQQRMIFAGKQLEDGRTLEEYSIIKATN 142

Query: 129 LQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQ 187
           +Q          IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+Q
Sbjct: 143 MQ----------IFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQRLIFAGKQ 191

Query: 188 LQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFRE 245
           L++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  +
Sbjct: 192 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK 251

Query: 246 IGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
            G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 252 EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 287



 Score =  104 bits (259), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 77/221 (34%), Positives = 117/221 (52%), Gaps = 11/221 (4%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L    ++T+ +IK  IE REGI   +  I + GK +E+   +   
Sbjct: 1   MQIFVKTLTG-KTITLDVVPTETVLDIKSKIEEREGIDPDQQRIIFAGKQLENGRIISDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI +  T+ ++   K   +IFV+  T  T+ ++     TV  VKK ++  R  IP     
Sbjct: 60  NIQHGSTMHLVLRLKGGMQIFVRMLTGKTIAIDTEPEATVESVKKQIDE-REEIPPNQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSIFVKLLNGRYIILEVAKFDTVRDVKD 240
           +   G+QL++ +TL  Y         II+     IFVK L G+ I LEV   DT+ +VK 
Sbjct: 119 MIFAGKQLEDGRTLEEY--------SIIKATNMQIFVKTLTGKTITLEVEPSDTIENVKA 170

Query: 241 KLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 171 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 211



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 67/201 (33%), Positives = 115/201 (57%), Gaps = 12/201 (5%)

Query: 9   IEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIHNDSGVMKLYFKT 68
           +E +K +I  +  EEI  +   + +AG+QLE+G T+ +Y     S+I   +  M+++ KT
Sbjct: 99  VESVKKQIDER--EEIPPNQQRMIFAGKQLEDGRTLEEY-----SIIKATN--MQIFVKT 149

Query: 69  PSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDT 128
            +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   NI  E T
Sbjct: 150 LTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST 208

Query: 129 LQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQ 187
           L ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+Q
Sbjct: 209 LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQRLIFAGKQ 267

Query: 188 LQNLKTLAYYDIKENEVLQII 208
           L++ +TL+ Y+I++   L ++
Sbjct: 268 LEDGRTLSDYNIQKESTLHLV 288



 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 51/135 (37%), Positives = 77/135 (57%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 157 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 214

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 215 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 273

Query: 118 LDVLNINNEDTLQMI 132
           L   NI  E TL ++
Sbjct: 274 LSDYNIQKESTLHLV 288


>gi|118370600|ref|XP_001018501.1| Ubiquitin family protein [Tetrahymena thermophila]
 gi|89300268|gb|EAR98256.1| Ubiquitin family protein [Tetrahymena thermophila SB210]
          Length = 228

 Score =  130 bits (326), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 82/223 (36%), Positives = 130/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I L+V   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  106 bits (265), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 73/216 (33%), Positives = 121/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LDVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 226


>gi|413926510|gb|AFW66442.1| putative ubiquitin family protein, partial [Zea mays]
          Length = 216

 Score =  130 bits (326), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 83/218 (38%), Positives = 127/218 (58%), Gaps = 5/218 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNE 276
           K K+  + G  PD QRL+F  +QLED R LA Y I  E
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKE 216



 Score =  105 bits (261), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 72/205 (35%), Positives = 118/205 (57%), Gaps = 8/205 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKE 201
           +   L   G+QL++ +TLA Y+I++
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQK 215



 Score = 94.4 bits (233), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 58/145 (40%), Positives = 88/145 (60%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TLA Y+
Sbjct: 2   QIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F  +QLED R LA Y I  ES ++L
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHL 145


>gi|384496533|gb|EIE87024.1| polyubiquitin [Rhizopus delemar RA 99-880]
          Length = 229

 Score =  129 bits (325), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 81/223 (36%), Positives = 132/223 (59%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SD+IEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDSIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + ++ +VK+ ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDSIENVKQKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   D++ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDSIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 72/212 (33%), Positives = 122/212 (57%), Gaps = 8/212 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDSIENVKQKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SD+IEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDSIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + ++ +VK+ ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDSIENVKQKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQII 208
           +   L   G+QL++ +TL+ Y+I++   L ++
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 222


>gi|294887015|ref|XP_002771956.1| polyubiquitin, putative [Perkinsus marinus ATCC 50983]
 gi|239875778|gb|EER03772.1| polyubiquitin, putative [Perkinsus marinus ATCC 50983]
          Length = 230

 Score =  129 bits (325), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 82/223 (36%), Positives = 130/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I L+V   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  106 bits (265), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 73/216 (33%), Positives = 121/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LDVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 226


>gi|92790178|emb|CAI83758.1| Polyubiqutin 5 [Polyplastron multivesiculatum]
          Length = 220

 Score =  129 bits (325), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 82/212 (38%), Positives = 125/212 (58%), Gaps = 4/212 (1%)

Query: 73  KTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMI 132
           KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   NI  E TL ++
Sbjct: 2   KTITLEVEPSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLV 61

Query: 133 SVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNL 191
              +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ 
Sbjct: 62  LRLRGGMQIFVKTLTGKTITLEVEPSDTIDNVKAKIQD-KEGIPPDQQRLIFAGKQLEDN 120

Query: 192 KTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQA 249
           +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  
Sbjct: 121 RTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIDNVKAKIQDKEGIP 180

Query: 250 PDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           PD QRL+F  +QLED+R LA Y I  ES ++L
Sbjct: 181 PDQQRLIFAGKQLEDNRTLADYNIQKESTLHL 212



 Score =  103 bits (256), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 72/216 (33%), Positives = 122/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+  T+ DY I   S +H    
Sbjct: 6   LEVEPSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLR 63

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 64  LRGGMQIFVKTLTG-KTITLEVEPSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDNRT 122

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 123 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIDNVKAKIQD-KEGIPP 181

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TLA Y+I++   L ++  ++
Sbjct: 182 DQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLRLR 217



 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/60 (48%), Positives = 39/60 (65%)

Query: 222 GRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           G+ I LEV   DT+ +VK K+  + G  PD QRL+F  +QLED+R LA Y I  ES ++L
Sbjct: 1   GKTITLEVEPSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHL 60


>gi|405978203|gb|EKC42613.1| Ubiquitin [Crassostrea gigas]
          Length = 222

 Score =  129 bits (325), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 81/212 (38%), Positives = 124/212 (58%), Gaps = 4/212 (1%)

Query: 73  KTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMI 132
           KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   NI  E TL ++
Sbjct: 4   KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 63

Query: 133 SVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNL 191
              +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ 
Sbjct: 64  LRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQRLIFAGKQLEDG 122

Query: 192 KTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQA 249
           +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  
Sbjct: 123 RTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIP 182

Query: 250 PDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 183 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 214



 Score =  107 bits (268), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 74/216 (34%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 8   LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 65

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 66  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 124

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 125 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 183

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 184 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 219



 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 28/62 (45%), Positives = 39/62 (62%)

Query: 220 LNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIV 279
           + G+ I LEV   DT+ +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES +
Sbjct: 1   MTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 60

Query: 280 NL 281
           +L
Sbjct: 61  HL 62


>gi|118370596|ref|XP_001018499.1| Ubiquitin family protein [Tetrahymena thermophila]
 gi|89300266|gb|EAR98254.1| Ubiquitin family protein [Tetrahymena thermophila SB210]
          Length = 228

 Score =  129 bits (325), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 82/223 (36%), Positives = 130/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLDIEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  TV L+V  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTVTLDVEASDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I L++   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDIEASDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 71/216 (32%), Positives = 121/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + ++ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LDIEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTVTLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ L++  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDIEASDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 226


>gi|343485991|dbj|BAK61751.1| ubiquitin [Sphaerozoum punctatum]
          Length = 228

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 82/223 (36%), Positives = 129/223 (57%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L    SDTI N++  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLDVESSDTISNVEAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVESSDTISNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I L+V   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVESSDTISNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  103 bits (257), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 71/216 (32%), Positives = 119/216 (55%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ I  ++ +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LDVESSDTISNVEAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L    SDTI N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLDVESSDTISNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVESSDTISNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TLA Y+I++   L ++  ++
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 226


>gi|443922596|gb|ELU42015.1| polyubiquitin [Rhizoctonia solani AG-1 IA]
          Length = 681

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 83/224 (37%), Positives = 131/224 (58%), Gaps = 5/224 (2%)

Query: 61  VMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDV 120
            M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL  
Sbjct: 452 TMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 510

Query: 121 LNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDC 179
            NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +  
Sbjct: 511 YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQ 569

Query: 180 ELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRD 237
            L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +
Sbjct: 570 RLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDN 629

Query: 238 VKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 630 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 673



 Score =  103 bits (258), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 72/212 (33%), Positives = 121/212 (57%), Gaps = 8/212 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 467 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 524

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 525 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 583

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 584 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 642

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQII 208
           +   L   G+QL++ +TL+ Y+I++   L ++
Sbjct: 643 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 674



 Score = 94.0 bits (232), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 59/157 (37%), Positives = 95/157 (60%), Gaps = 5/157 (3%)

Query: 128 TLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGE 186
           +L++  +P  +Q IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+
Sbjct: 443 SLRLPEIPTTMQ-IFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQRLIFAGK 500

Query: 187 QLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFR 244
           QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  
Sbjct: 501 QLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD 560

Query: 245 EIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 561 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 597


>gi|339233016|ref|XP_003381625.1| ubiquitin family protein [Trichinella spiralis]
 gi|316979538|gb|EFV62321.1| ubiquitin family protein [Trichinella spiralis]
          Length = 258

 Score =  129 bits (324), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 130/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 33  MQIFVKTLTG-KTITLEVEPSDTIENVKGKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 91

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 92  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKSKIQD-KEGIPPDQQR 150

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ + L+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 151 LIFAGKQLEDGRMLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 210

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 211 KGKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 253



 Score =  103 bits (258), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 73/212 (34%), Positives = 120/212 (56%), Gaps = 8/212 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 47  LEVEPSDTIENVKGKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 104

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E    
Sbjct: 105 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRM 163

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 164 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKGKIQD-KEGIPP 222

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQII 208
           +   L   G+QL++ +TL+ Y+I++   L ++
Sbjct: 223 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 254



 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/72 (48%), Positives = 45/72 (62%)

Query: 210 HVKHSIFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLA 269
           H K  IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+F  +QLED R L+
Sbjct: 30  HRKMQIFVKTLTGKTITLEVEPSDTIENVKGKIQDKEGIPPDQQRLIFAGKQLEDGRTLS 89

Query: 270 SYKIVNESIVNL 281
            Y I  ES ++L
Sbjct: 90  DYNIQKESTLHL 101


>gi|164430972|gb|ABY55758.1| ubiquitin [Drosophila silvestris]
          Length = 222

 Score =  129 bits (324), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 82/217 (37%), Positives = 127/217 (58%), Gaps = 5/217 (2%)

Query: 60  GVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLD 119
           G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL 
Sbjct: 7   GGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLS 65

Query: 120 VLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSED 178
             NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP + 
Sbjct: 66  DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQ 124

Query: 179 CELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVR 236
             L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ 
Sbjct: 125 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 184

Query: 237 DVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKI 273
           +VK K+  + G  PD QRL+F  +QLED R L+ Y I
Sbjct: 185 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 221



 Score =  104 bits (260), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 73/204 (35%), Positives = 117/204 (57%), Gaps = 8/204 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 23  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 80

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 81  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 139

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 140 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 198

Query: 177 EDCELFRGGEQLQNLKTLAYYDIK 200
           +   L   G+QL++ +TL+ Y+I+
Sbjct: 199 DQQRLIFAGKQLEDGRTLSDYNIQ 222



 Score = 91.7 bits (226), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 56/145 (38%), Positives = 88/145 (60%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TL+ Y+
Sbjct: 10  QIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYN 68

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+
Sbjct: 69  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 128

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F  +QLED R L+ Y I  ES ++L
Sbjct: 129 FAGKQLEDGRTLSDYNIQKESTLHL 153


>gi|425780946|gb|EKV18932.1| hypothetical protein PDIP_25190 [Penicillium digitatum Pd1]
          Length = 233

 Score =  129 bits (324), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 80/212 (37%), Positives = 124/212 (58%), Gaps = 4/212 (1%)

Query: 73  KTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMI 132
           KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   NI  E TL ++
Sbjct: 15  KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 74

Query: 133 SVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNL 191
              +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ 
Sbjct: 75  LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPPDQQRLIFAGKQLEDG 133

Query: 192 KTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQA 249
           +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  
Sbjct: 134 RTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIP 193

Query: 250 PDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 194 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 225



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 72/216 (33%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 19  LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 76

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 77  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 135

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 136 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 194

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 195 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 230



 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 43/68 (63%)

Query: 214 SIFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKI 273
           +I + L+ G+ I LEV   DT+ +VK K+  + G  PD QRL+F  +QLED R L+ Y I
Sbjct: 6   NIPLSLVTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 65

Query: 274 VNESIVNL 281
             ES ++L
Sbjct: 66  QKESTLHL 73


>gi|221122833|ref|XP_002155023.1| PREDICTED: polyubiquitin-C, partial [Hydra magnipapillata]
          Length = 530

 Score =  129 bits (324), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 100/291 (34%), Positives = 161/291 (55%), Gaps = 19/291 (6%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIHND-- 58
           ++V++   IE +K  I  KV E +  D   LF+AG  L++  T+ DY I   S++ +   
Sbjct: 87  LEVERINTIEDVKENI--KVREGVPPDQQRLFFAGNILKDERTLSDYNILKESILQHVLR 144

Query: 59  -SGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G MK++ KT +  KT  L+   +DTIEN+K  I+ +EG    +  + + GK +E   T
Sbjct: 145 LEGDMKIFVKTLTG-KTITLEVEPADTIENVKAKIQDKEGFLPDQQRLIFAGKELEDDRT 203

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRIC--- 173
           L   N+  E TL ++   +   +IFV+T T  T  LEV  A+T+ +VK      +IC   
Sbjct: 204 LSYYNVQKESTLHLVLRLRGGMQIFVKTLTGKTFTLEVEPANTIDEVK-----AKICDKE 258

Query: 174 -IPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVA 230
            +P +   L   G  L++  TL+  ++++  VLQ++  ++    IFVK L G+ I LEV 
Sbjct: 259 GVPPDQQRLIFHGILLED-ATLSDCNVQKKSVLQLVLRLRGGMQIFVKTLTGKTITLEVE 317

Query: 231 KFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
             DT+ +VK ++  + G  PD QRL+F  ++LEDDR L+ Y +  ES ++L
Sbjct: 318 LADTIENVKARIQDKKGFLPDQQRLIFAGKELEDDRTLSYYNVQKESTLHL 368



 Score =  127 bits (319), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 91/287 (31%), Positives = 162/287 (56%), Gaps = 11/287 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+  + IE +K +I  K  E  L D   L +AG++LE+  T+  Y +   S +H    
Sbjct: 163 LEVEPADTIENVKAKIQDK--EGFLPDQQRLIFAGKELEDDRTLSYYNVQKESTLHLVLR 220

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KTF L+   ++TI+ +K  I  +EG+P  +  + + G L+E   T
Sbjct: 221 LRGGMQIFVKTLTG-KTFTLEVEPANTIDEVKAKICDKEGVPPDQQRLIFHGILLEDA-T 278

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   N+  +  LQ++   +   +IFV+T T  T+ LEV  A T+ +VK  ++  +  +P 
Sbjct: 279 LSDCNVQKKSVLQLVLRLRGGMQIFVKTLTGKTITLEVELADTIENVKARIQDKKGFLPD 338

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   +F  G++L++ +TL+YY++++   L ++  ++ S  IFVK L G+ I LEV   DT
Sbjct: 339 QQRLIF-AGKELEDDRTLSYYNVQKESTLHLVLRLRGSMNIFVKTLTGKTITLEVEPADT 397

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G   D Q L F  ++LE++R L+ Y I  +  ++L
Sbjct: 398 IDNVKAKIHDKEGVPLDQQSLFFAGKELENERTLSDYNIQKKYTLDL 444



 Score =  123 bits (309), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 83/255 (32%), Positives = 149/255 (58%), Gaps = 7/255 (2%)

Query: 31  LFYAGQQLENGLTVIDYGIPNNSVIH-NDSGVMKLYFKTPSNEKTFELKANRSDTIENIK 89
           L +A ++LE+G T++DY I  NS ++  + G+ +++ KT ++ K   L+  R +TIE++K
Sbjct: 41  LIFANKKLEDGRTLVDYNIQKNSCLYLVEVGIGQIHIKTLTS-KIISLEVERINTIEDVK 99

Query: 90  FIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEIFVQTPTS- 148
             I+VREG+P  +  +++ G +++   TL   NI  E  LQ +   +   +IFV+T T  
Sbjct: 100 ENIKVREGVPPDQQRLFFAGNILKDERTLSDYNILKESILQHVLRLEGDMKIFVKTLTGK 159

Query: 149 TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQII 208
           T+ LEV  A T+ +VK  ++     +P +   +F  G++L++ +TL+YY++++   L ++
Sbjct: 160 TITLEVEPADTIENVKAKIQDKEGFLPDQQRLIF-AGKELEDDRTLSYYNVQKESTLHLV 218

Query: 209 RHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDR 266
             ++    IFVK L G+   LEV   +T+ +VK K+  + G  PD QRL+F    LE D 
Sbjct: 219 LRLRGGMQIFVKTLTGKTFTLEVEPANTIDEVKAKICDKEGVPPDQQRLIFHGILLE-DA 277

Query: 267 NLASYKIVNESIVNL 281
            L+   +  +S++ L
Sbjct: 278 TLSDCNVQKKSVLQL 292



 Score =  105 bits (261), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 88/285 (30%), Positives = 151/285 (52%), Gaps = 11/285 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+    I+++K +I  K  E +  D   L + G  LE+  T+ D  +   SV+     
Sbjct: 239 LEVEPANTIDEVKAKICDK--EGVPPDQQRLIFHGILLEDA-TLSDCNVQKKSVLQLVLR 295

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   +DTIEN+K  I+ ++G    +  + + GK +E   T
Sbjct: 296 LRGGMQIFVKTLTG-KTITLEVELADTIENVKARIQDKKGFLPDQQRLIFAGKELEDDRT 354

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   N+  E TL ++   +    IFV+T T  T+ LEV  A T+ +VK  +   +  +P 
Sbjct: 355 LSYYNVQKESTLHLVLRLRGSMNIFVKTLTGKTITLEVEPADTIDNVKAKIHD-KEGVPL 413

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   LF  G++L+N +TL+ Y+I++   L +   ++    I VK L  + I LEV   +T
Sbjct: 414 DQQSLFFAGKELENERTLSDYNIQKKYTLDLFLRIEGGMRINVKTLTRKIITLEVNPANT 473

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIV 279
           + ++K K+       PD   L F  QQL+++R+L+SY I +ES +
Sbjct: 474 INNIKAKISDMDCILPDQHVLTFNGQQLDNERSLSSYNIESESTL 518



 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 75/212 (35%), Positives = 120/212 (56%), Gaps = 8/212 (3%)

Query: 73  KTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMI 132
           K   L+   +DTI+  K  I+ +EGIP     + +  K +E   TL   NI     L ++
Sbjct: 11  KIMTLEVEPADTIKKAK--IQDKEGIPPAYQHLIFANKKLEDGRTLVDYNIQKNSCLYLV 68

Query: 133 SVPKELQEIFVQTPTSTV-KLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNL 191
            V   + +I ++T TS +  LEV R +T+ DVK+ ++ +R  +P +   LF  G  L++ 
Sbjct: 69  EVG--IGQIHIKTLTSKIISLEVERINTIEDVKENIK-VREGVPPDQQRLFFAGNILKDE 125

Query: 192 KTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQA 249
           +TL+ Y+I +  +LQ +  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  
Sbjct: 126 RTLSDYNILKESILQHVLRLEGDMKIFVKTLTGKTITLEVEPADTIENVKAKIQDKEGFL 185

Query: 250 PDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           PD QRL+F  ++LEDDR L+ Y +  ES ++L
Sbjct: 186 PDQQRLIFAGKELEDDRTLSYYNVQKESTLHL 217



 Score = 65.5 bits (158), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 47/141 (33%), Positives = 74/141 (52%), Gaps = 4/141 (2%)

Query: 140 EIFVQTPTSTV-KLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IF +T    +  LEV  A T+   KK     +  IP     L    ++L++ +TL  Y+
Sbjct: 2   QIFAETQCYKIMTLEVEPADTI---KKAKIQDKEGIPPAYQHLIFANKKLEDGRTLVDYN 58

Query: 199 IKENEVLQIIRHVKHSIFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFK 258
           I++N  L ++      I +K L  + I LEV + +T+ DVK+ +    G  PD QRL F 
Sbjct: 59  IQKNSCLYLVEVGIGQIHIKTLTSKIISLEVERINTIEDVKENIKVREGVPPDQQRLFFA 118

Query: 259 RQQLEDDRNLASYKIVNESIV 279
              L+D+R L+ Y I+ ESI+
Sbjct: 119 GNILKDERTLSDYNILKESIL 139



 Score = 37.7 bits (86), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 2/72 (2%)

Query: 215 IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIV 274
           IF +    + + LEV   DT++  K K+  + G  P  Q L+F  ++LED R L  Y I 
Sbjct: 3   IFAETQCYKIMTLEVEPADTIK--KAKIQDKEGIPPAYQHLIFANKKLEDGRTLVDYNIQ 60

Query: 275 NESIVNLTDLGM 286
             S + L ++G+
Sbjct: 61  KNSCLYLVEVGI 72


>gi|403338482|gb|EJY68482.1| Putative ubiquitin C variant 2 [Oxytricha trifallax]
          Length = 228

 Score =  129 bits (323), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 82/223 (36%), Positives = 130/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I L+V   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 73/218 (33%), Positives = 121/218 (55%), Gaps = 8/218 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LDVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 228


>gi|297809725|ref|XP_002872746.1| hypothetical protein ARALYDRAFT_911794 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297809771|ref|XP_002872769.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297318583|gb|EFH49005.1| hypothetical protein ARALYDRAFT_911794 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297318606|gb|EFH49028.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 229

 Score =  129 bits (323), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 130/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G   D QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPLDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  107 bits (267), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 73/216 (33%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPL 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TLA Y+I++   L ++  ++
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 226


>gi|340059193|emb|CCC53576.1| putative polyubiquitin [Trypanosoma vivax Y486]
          Length = 282

 Score =  129 bits (323), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 82/212 (38%), Positives = 123/212 (58%), Gaps = 4/212 (1%)

Query: 73  KTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMI 132
           KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   NI  E TL ++
Sbjct: 48  KTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLHLV 107

Query: 133 SVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNL 191
              +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL+  
Sbjct: 108 LRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAKIQD-KEGIPPDQQRLIFAGKQLEEG 166

Query: 192 KTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQA 249
           +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  
Sbjct: 167 RTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIP 226

Query: 250 PDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           PD QRL+F  +QLE+ R LA Y I  ES ++L
Sbjct: 227 PDQQRLIFAGKQLEEGRTLADYNIQKESTLHL 258



 Score =  111 bits (278), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 80/226 (35%), Positives = 126/226 (55%), Gaps = 10/226 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE G T+ DY I   S +H    
Sbjct: 52  LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLHLVLR 109

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 110 LRGGMQIFVKTLTG-KTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRT 168

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 169 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAKIQD-KEGIPP 227

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLL 220
           +   L   G+QL+  +TLA Y+I++   L ++  ++    IFVK L
Sbjct: 228 DQQRLIFAGKQLEEGRTLADYNIQKESTLHLVLRLRGGMQIFVKYL 273



 Score = 88.2 bits (217), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 56/144 (38%), Positives = 85/144 (59%), Gaps = 4/144 (2%)

Query: 141 IFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDI 199
           I V+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL+  +TLA Y+I
Sbjct: 40  ILVKTLTGKTIALEVEASDTIENVKAKIQD-KEGIPPDQQRLIFAGKQLEEGRTLADYNI 98

Query: 200 KENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVF 257
           ++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+F
Sbjct: 99  QKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIF 158

Query: 258 KRQQLEDDRNLASYKIVNESIVNL 281
             +QLE+ R LA Y I  ES ++L
Sbjct: 159 AGKQLEEGRTLADYNIQKESTLHL 182


>gi|6007448|gb|AAF00920.1|AF188158_1 ubiquitin [Oxytricha trifallax]
 gi|403333775|gb|EJY66009.1| Putative ubiquitin C variant 2 [Oxytricha trifallax]
          Length = 229

 Score =  129 bits (323), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 82/223 (36%), Positives = 130/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I L+V   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 73/216 (33%), Positives = 121/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LDVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 226


>gi|339233010|ref|XP_003381622.1| ubiquitin family protein [Trichinella spiralis]
 gi|316979542|gb|EFV62324.1| ubiquitin family protein [Trichinella spiralis]
          Length = 277

 Score =  129 bits (323), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 82/223 (36%), Positives = 130/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SD+IEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDSIENVKGKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKSKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ + L+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRMLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KGKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 78/239 (32%), Positives = 130/239 (54%), Gaps = 8/239 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDSIENVKGKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E    
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRM 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKGKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSIFVKLLNGRYIILEVAKFDTV 235
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  +      G+  I EV    T+
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMRNFGKTGQTAISEVESSRTI 249


>gi|388518367|gb|AFK47245.1| unknown [Medicago truncatula]
          Length = 233

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 130/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTIILEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LVFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKALTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA   I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADNNIQKESTLHL 221



 Score =  102 bits (255), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 71/218 (32%), Positives = 121/218 (55%), Gaps = 8/218 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLVFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+  T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKALTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
           +   L   G+QL++ +TLA  +I++   L ++  ++  
Sbjct: 191 DQQRLIFAGKQLEDGRTLADNNIQKESTLHLVLRLRGG 228


>gi|118370602|ref|XP_001018502.1| Ubiquitin family protein [Tetrahymena thermophila]
 gi|89300269|gb|EAR98257.1| Ubiquitin family protein [Tetrahymena thermophila SB210]
          Length = 228

 Score =  128 bits (321), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 81/223 (36%), Positives = 129/223 (57%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLDIEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  TV L+V    T+ ++K  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTVTLDVEATDTIENIKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I L+V   DT+ ++
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVESSDTIENI 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  104 bits (260), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 71/216 (32%), Positives = 121/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + ++ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LDIEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L    +DTIENIK  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTVTLDVEATDTIENIKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ L+V  + T+ ++K  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVESSDTIENIKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 226


>gi|1684857|gb|AAB36546.1| polyubiquitin [Phaseolus vulgaris]
          Length = 215

 Score =  127 bits (319), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 80/208 (38%), Positives = 122/208 (58%), Gaps = 4/208 (1%)

Query: 77  LKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMISVPK 136
           L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   NI  E TL ++   +
Sbjct: 1   LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 60

Query: 137 ELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLA 195
              +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TLA
Sbjct: 61  GGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLA 119

Query: 196 YYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQ 253
            Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD Q
Sbjct: 120 DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQ 179

Query: 254 RLVFKRQQLEDDRNLASYKIVNESIVNL 281
           RL+F  +QLED R LA Y I  ES ++L
Sbjct: 180 RLIFAGKQLEDGRTLADYNIQKESTLHL 207



 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 73/219 (33%), Positives = 124/219 (56%), Gaps = 8/219 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 1   LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 58

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 59  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 117

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 118 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 176

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSI 215
           +   L   G+QL++ +TLA Y+I++   L ++  ++  +
Sbjct: 177 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGL 215


>gi|6934302|gb|AAF31707.1|AF221858_1 polyubiquitin [Euphorbia esula]
          Length = 215

 Score =  127 bits (319), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 80/208 (38%), Positives = 122/208 (58%), Gaps = 4/208 (1%)

Query: 77  LKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMISVPK 136
           L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   NI  E TL ++   +
Sbjct: 1   LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 60

Query: 137 ELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLA 195
              +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TLA
Sbjct: 61  GGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLA 119

Query: 196 YYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQ 253
            Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD Q
Sbjct: 120 DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQ 179

Query: 254 RLVFKRQQLEDDRNLASYKIVNESIVNL 281
           RL+F  +QLED R LA Y I  ES ++L
Sbjct: 180 RLIFAGKQLEDGRTLADYNIQKESTLHL 207



 Score =  108 bits (269), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 73/212 (34%), Positives = 121/212 (57%), Gaps = 8/212 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 1   LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 58

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 59  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 117

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 118 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 176

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQII 208
           +   L   G+QL++ +TLA Y+I++   L ++
Sbjct: 177 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 208


>gi|309252551|gb|ADO60140.1| ubiquitin [Beauveria bassiana]
          Length = 215

 Score =  127 bits (319), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 80/215 (37%), Positives = 126/215 (58%), Gaps = 5/215 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKI 273
           K K+  + G  PD QRL+F  +QLED R L+ Y I
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 213



 Score =  103 bits (256), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 71/205 (34%), Positives = 118/205 (57%), Gaps = 8/205 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKE 201
           +   L   G+QL++ +TL+ Y+I++
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQK 215



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 56/145 (38%), Positives = 88/145 (60%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TL+ Y+
Sbjct: 2   QIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F  +QLED R L+ Y I  ES ++L
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHL 145


>gi|198424689|ref|XP_002119546.1| PREDICTED: similar to ubiquitin isoform 2 [Ciona intestinalis]
 gi|198424691|ref|XP_002119309.1| PREDICTED: similar to ubiquitin isoform 1 [Ciona intestinalis]
          Length = 229

 Score =  127 bits (319), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 80/223 (35%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SD+I+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEASDSIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + ++ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDSIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   D++ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDSIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  105 bits (263), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 71/219 (32%), Positives = 124/219 (56%), Gaps = 8/219 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEASDSIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SD+I+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEASDSIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + ++ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDSIDNVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSI 215
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  I
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGI 229


>gi|323448851|gb|EGB04744.1| ubiquitin [Aureococcus anophagefferens]
          Length = 229

 Score =  127 bits (319), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 81/223 (36%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L    SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK+ ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDNVKQKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I L+V   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  102 bits (255), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 71/216 (32%), Positives = 122/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LDVEPSDTIDNVKQKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L    SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK+ ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDNVKQKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 226


>gi|428175943|gb|EKX44830.1| ubiquitin [Guillardia theta CCMP2712]
          Length = 229

 Score =  127 bits (318), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 128/223 (57%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+ +K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDMVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+  VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDMVKSKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+  V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDMV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221



 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 72/216 (33%), Positives = 121/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDMVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+ +K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDMVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+  VK  ++  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDMVKSKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TLA Y+I++   L ++  ++
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 226


>gi|56684130|gb|AAW22168.1| polyubiquitin [Monocercomonoides sp. PA203]
          Length = 229

 Score =  127 bits (318), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 82/223 (36%), Positives = 128/223 (57%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   +DTIE++K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVENADTIESVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLQDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  A T+  VK+ ++  +  IP +   
Sbjct: 60  NIQKEATLHLVLRLRGGMQIFVKTLTGKTITLEVENADTIESVKQKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL  Y+I++   L ++  ++    IFVK L G+ I LEV   DT+  V
Sbjct: 119 LIFAGKQLEDGRTLQDYNIQKEATLHLVLRLRGGMQIFVKTLTGKTITLEVENADTIESV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L  Y I  E+ ++L
Sbjct: 179 KQKIQDKEGIPPDQQRLIFAGKQLEDGRTLQDYNIQKEATLHL 221



 Score =  102 bits (255), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 72/218 (33%), Positives = 121/218 (55%), Gaps = 8/218 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+  + IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   + +H    
Sbjct: 15  LEVENADTIESVKQKIQDK--EGIPPDQQRLIFAGKQLEDGRTLQDYNIQKEATLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   +DTIE++K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVENADTIESVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  A T+  VK+ ++  +  IP 
Sbjct: 132 LQDYNIQKEATLHLVLRLRGGMQIFVKTLTGKTITLEVENADTIESVKQKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
           +   L   G+QL++ +TL  Y+I++   L ++  ++  
Sbjct: 191 DQQRLIFAGKQLEDGRTLQDYNIQKEATLHLVLRLRGG 228


>gi|124784679|gb|ABN14988.1| polyubiquitin [Taenia asiatica]
          Length = 251

 Score =  127 bits (318), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 89/254 (35%), Positives = 143/254 (56%), Gaps = 10/254 (3%)

Query: 3   VKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---NDS 59
           V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H      
Sbjct: 2   VEPSDSIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 59

Query: 60  GVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLD 119
           G M+++ KT +  KT  L+   SD+IEN+K  I+ +EGIP  +  + + GK +E   TL 
Sbjct: 60  GGMQIFVKTLTG-KTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLS 118

Query: 120 VLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSED 178
             NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP + 
Sbjct: 119 DYNIQKESTLHLVLRMRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQ 177

Query: 179 CELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVR 236
             L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   D++ 
Sbjct: 178 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIE 237

Query: 237 DVKDKLFREIGQAP 250
           +VK K+  + G  P
Sbjct: 238 NVKAKIPDKEGIPP 251



 Score =  123 bits (308), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 76/203 (37%), Positives = 120/203 (59%), Gaps = 4/203 (1%)

Query: 82  SDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEI 141
           SD+IEN+K  I+ +EGIP  +  + + GK +E   TL   NI  E TL ++   +   +I
Sbjct: 5   SDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQI 64

Query: 142 FVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIK 200
           FV+T T  T+ LEV  + ++ +VK  ++  +  IP +   L   G+QL++ +TL+ Y+I+
Sbjct: 65  FVKTLTGKTITLEVEPSDSIENVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 123

Query: 201 ENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFK 258
           +   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+F 
Sbjct: 124 KESTLHLVLRMRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFA 183

Query: 259 RQQLEDDRNLASYKIVNESIVNL 281
            +QLED R L+ Y I  ES ++L
Sbjct: 184 GKQLEDGRTLSDYNIQKESTLHL 206



 Score = 89.4 bits (220), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 62/171 (36%), Positives = 97/171 (56%), Gaps = 7/171 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 76  LEVEPSDSIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 133

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 134 MRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 192

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMV 167
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + ++ +VK  +
Sbjct: 193 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKI 243



 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 24/54 (44%), Positives = 34/54 (62%)

Query: 228 EVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           EV   D++ +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 1   EVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 54


>gi|239788925|dbj|BAH71115.1| ACYPI006410 [Acyrthosiphon pisum]
          Length = 230

 Score =  126 bits (317), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 80/223 (35%), Positives = 130/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SD+IEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + ++ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDSIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   D++ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDSIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  E  ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEFTLHL 221



 Score =  105 bits (263), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 72/212 (33%), Positives = 121/212 (57%), Gaps = 8/212 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDSIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SD+IEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + ++ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDSIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQII 208
           +   L   G+QL++ +TL+ Y+I++   L ++
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKEFTLHLV 222


>gi|353238378|emb|CCA70326.1| related to UBI4-Ubiquitin [Piriformospora indica DSM 11827]
          Length = 222

 Score =  126 bits (317), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 79/211 (37%), Positives = 123/211 (58%), Gaps = 4/211 (1%)

Query: 74  TFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMIS 133
           T  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   NI  E TL ++ 
Sbjct: 5   TITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 64

Query: 134 VPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLK 192
             +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +
Sbjct: 65  RLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQD-KEGIPPDQQRLIFAGKQLEDGR 123

Query: 193 TLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAP 250
           TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  P
Sbjct: 124 TLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPP 183

Query: 251 DSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           D QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 184 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 214



 Score =  106 bits (265), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 72/219 (32%), Positives = 124/219 (56%), Gaps = 8/219 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 8   LEVESSDTIDNVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 65

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 66  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 124

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 125 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQD-KEGIPP 183

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSI 215
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  +
Sbjct: 184 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGL 222


>gi|66807485|ref|XP_637465.1| hypothetical protein DDB_G0286907 [Dictyostelium discoideum AX4]
 gi|302595959|sp|P0CG77.1|UBIQD_DICDI RecName: Full=Polyubiquitin-D; Contains: RecName: Full=Ubiquitin;
           Flags: Precursor
 gi|167943|gb|AAA33265.1| ubiquitin [Dictyostelium discoideum]
 gi|167953|gb|AAA33270.1| ubiquitin [Dictyostelium discoideum]
 gi|60465881|gb|EAL63951.1| hypothetical protein DDB_G0286907 [Dictyostelium discoideum AX4]
          Length = 229

 Score =  126 bits (317), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 81/223 (36%), Positives = 128/223 (57%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SD IEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  +  + +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   D + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  104 bits (260), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 72/219 (32%), Positives = 122/219 (55%), Gaps = 8/219 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEGSDNIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SD IEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  +  + +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSI 215
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  +
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGL 229


>gi|164510092|emb|CAJ32650.1| ubiquitin [Mytilus edulis]
          Length = 228

 Score =  126 bits (316), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 82/223 (36%), Positives = 126/223 (56%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQSLIFAGKQLEDGSTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++       +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLSGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQS 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++  TL+ Y+I++   L ++  +     IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGSTLSDYNIQKESTLHLVLRLSGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD Q L+F  +QLED   L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQSLMFAGKQLEDGSTLSDYNIQKESTLHL 221



 Score =  109 bits (272), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 75/212 (35%), Positives = 120/212 (56%), Gaps = 8/212 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQSLIFAGKQLEDGSTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
            SG M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LSGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQSLIFAGKQLEDGST 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++       +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLSGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQII 208
           +   L   G+QL++  TL+ Y+I++   L ++
Sbjct: 191 DQQSLMFAGKQLEDGSTLSDYNIQKESTLHLV 222


>gi|197129052|gb|ACH45550.1| putative ubiquitin C variant 1 [Taeniopygia guttata]
          Length = 245

 Score =  126 bits (316), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 81/215 (37%), Positives = 126/215 (58%), Gaps = 5/215 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDD 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKI 273
           K K+  + G  PD QRL+F  +QLED R L+ Y I
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 213



 Score =  100 bits (248), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 72/205 (35%), Positives = 117/205 (57%), Gaps = 8/205 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ D  I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDDNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKE 201
           +   L   G+QL++ +TL+ Y+I++
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQK 215



 Score = 87.8 bits (216), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 55/145 (37%), Positives = 87/145 (60%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TL+  +
Sbjct: 2   QIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDDN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F  +QLED R L+ Y I  ES ++L
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHL 145


>gi|625174|gb|AAC84175.1| ubiquitin [Artemia franciscana]
          Length = 225

 Score =  126 bits (316), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 78/203 (38%), Positives = 120/203 (59%), Gaps = 4/203 (1%)

Query: 82  SDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEI 141
           SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   NI  E TL ++   +   +I
Sbjct: 3   SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQI 62

Query: 142 FVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIK 200
           FV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TL+ Y+I+
Sbjct: 63  FVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 121

Query: 201 ENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFK 258
           +   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+F 
Sbjct: 122 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFA 181

Query: 259 RQQLEDDRNLASYKIVNESIVNL 281
            +QLED R L+ Y I  ES ++L
Sbjct: 182 GKQLEDGRTLSDYNIQKESTLHL 204



 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 73/211 (34%), Positives = 119/211 (56%), Gaps = 8/211 (3%)

Query: 6   TEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---NDSGVM 62
           ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H      G M
Sbjct: 3   SDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 60

Query: 63  KLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLN 122
           +++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   N
Sbjct: 61  QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 119

Query: 123 INNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCEL 181
           I  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L
Sbjct: 120 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQRL 178

Query: 182 FRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
              G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 179 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 209


>gi|218198762|gb|EEC81189.1| hypothetical protein OsI_24195 [Oryza sativa Indica Group]
          Length = 223

 Score =  125 bits (315), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 79/203 (38%), Positives = 120/203 (59%), Gaps = 4/203 (1%)

Query: 82  SDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEI 141
           SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   NI  E TL ++   +   +I
Sbjct: 14  SDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQI 73

Query: 142 FVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIK 200
           FV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TLA Y+I+
Sbjct: 74  FVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 132

Query: 201 ENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFK 258
           +   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+F 
Sbjct: 133 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 192

Query: 259 RQQLEDDRNLASYKIVNESIVNL 281
            +QLED R LA Y I  ES ++L
Sbjct: 193 GKQLEDGRTLADYNIQKESTLHL 215



 Score =  106 bits (265), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 73/214 (34%), Positives = 121/214 (56%), Gaps = 8/214 (3%)

Query: 3   VKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---NDS 59
           V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H      
Sbjct: 11  VESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 68

Query: 60  GVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLD 119
           G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL 
Sbjct: 69  GGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLA 127

Query: 120 VLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSED 178
             NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP + 
Sbjct: 128 DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQ 186

Query: 179 CELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
             L   G+QL++ +TLA Y+I++   L ++  ++
Sbjct: 187 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 220



 Score = 84.7 bits (208), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 51/131 (38%), Positives = 78/131 (59%), Gaps = 3/131 (2%)

Query: 153 EVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           EV  + T+ +VK  ++  +  IP +   L   G+QL++ +TLA Y+I++   L ++  ++
Sbjct: 10  EVESSDTIDNVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 68

Query: 213 HS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLAS 270
               IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+F  +QLED R LA 
Sbjct: 69  GGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD 128

Query: 271 YKIVNESIVNL 281
           Y I  ES ++L
Sbjct: 129 YNIQKESTLHL 139


>gi|18405196|ref|NP_564675.1| polyubiquitin 12 [Arabidopsis thaliana]
 gi|122213849|sp|Q3E7K8.1|UBQ12_ARATH RecName: Full=Polyubiquitin 12; Contains: RecName:
           Full=Ubiquitin-related 1; Contains: RecName:
           Full=Ubiquitin-related 2; Contains: RecName:
           Full=Ubiquitin-related 3; Flags: Precursor
 gi|332195060|gb|AEE33181.1| polyubiquitin 12 [Arabidopsis thaliana]
          Length = 230

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 81/223 (36%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+  EGIP  ++ + + GK +E   TL   
Sbjct: 1   MQIFLKTLTG-KTKVLEVESSDTIDNVKAKIQDIEGIPPDQHRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           N+  + TL ++   +   +IFV+T T  T+ LEV  + T+ ++K  ++  +  IP +   
Sbjct: 60  NVQEDSTLHLLLRFRGGMQIFVKTLTGKTITLEVESSDTIDNLKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G +PD QRL+F  +Q ED R LA Y I  ES ++L
Sbjct: 179 KAKIQDKEGISPDQQRLIFAGKQHEDGRTLADYNIQKESTLHL 221



 Score =  101 bits (252), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 70/220 (31%), Positives = 122/220 (55%), Gaps = 8/220 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I     E I  D   L +AG+QLE+G T+ DY +  +S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDI--EGIPPDQHRLIFAGKQLEDGRTLADYNVQEDSTLHLLLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  FRGGMQIFVKTLTG-KTITLEVESSDTIDNLKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++      P 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGISPD 191

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSIF 216
           +   +F  G+Q ++ +TLA Y+I++   L ++  ++   F
Sbjct: 192 QQRLIF-AGKQHEDGRTLADYNIQKESTLHLVLRLRGGSF 230


>gi|224503947|gb|ACN53545.1| polyubiquitin-like protein [Piriformospora indica]
          Length = 229

 Score =  125 bits (313), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 80/223 (35%), Positives = 128/223 (57%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M ++ KT +  KT  L+   SDTI+++K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MHIFVKTLTG-KTITLEVESSDTIDDVKTNIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           +I  E TL ++   +   +IF++T T  T+ LEV  + T+ DVK  ++      P +   
Sbjct: 60  DIQKESTLHLVLRLRGGMQIFLKTLTGKTITLEVESSDTIDDVKTKIQDKEGIPPDQQRW 119

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           +F  G+QL++ +TL+ Y+I++   L ++  +     IFVK L G+ I LEV   DT+ +V
Sbjct: 120 IF-AGKQLEDGRTLSDYNIQKESTLHLVLRLTGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 71/219 (32%), Positives = 121/219 (55%), Gaps = 8/219 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K  I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDDVKTNIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYDIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+++K  I+ +EGIP  +    + GK +E   T
Sbjct: 73  LRGGMQIFLKTLTG-KTITLEVESSDTIDDVKTKIQDKEGIPPDQQRWIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++       +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLTGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSI 215
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  +
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGL 229


>gi|349592832|gb|AEP96154.1| ubiquitin C-like protein [Euplectes orix]
          Length = 224

 Score =  124 bits (312), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 80/223 (35%), Positives = 127/223 (56%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD Q L+F  +QLED R L+ Y I  + +   
Sbjct: 179 KAKIQDKEGIPPDQQXLIFAGKQLEDGRTLSDYNIQKDPLCTW 221



 Score =  104 bits (259), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 73/206 (35%), Positives = 119/206 (57%), Gaps = 8/206 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKEN 202
           +   L   G+QL++ +TL+ Y+I+++
Sbjct: 191 DQQXLIFAGKQLEDGRTLSDYNIQKD 216


>gi|167945|gb|AAA33266.1| ubiquitin [Dictyostelium discoideum]
          Length = 229

 Score =  124 bits (311), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 80/223 (35%), Positives = 127/223 (56%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +   T  L+   SD IEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-NTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  +  + +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   D + +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  104 bits (260), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 72/219 (32%), Positives = 122/219 (55%), Gaps = 8/219 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEGSDNIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SD IEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  +  + +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSI 215
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  +
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGL 229


>gi|16191634|emb|CAC94926.1| putative ubiquitin [Pleurotus sp. 'Florida']
          Length = 243

 Score =  124 bits (311), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 77/203 (37%), Positives = 120/203 (59%), Gaps = 4/203 (1%)

Query: 82  SDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEI 141
           SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   NI  E TL ++   +   +I
Sbjct: 1   SDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQI 60

Query: 142 FVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIK 200
           FV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TL+ Y+I+
Sbjct: 61  FVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 119

Query: 201 ENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFK 258
           +   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+F 
Sbjct: 120 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 179

Query: 259 RQQLEDDRNLASYKIVNESIVNL 281
            +QLED R L+ Y I  ES ++L
Sbjct: 180 GKQLEDGRTLSDYNIQKESTLHL 202



 Score =  124 bits (311), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 85/240 (35%), Positives = 136/240 (56%), Gaps = 10/240 (4%)

Query: 6   TEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---NDSGVM 62
           ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H      G M
Sbjct: 1   SDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 58

Query: 63  KLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLN 122
           +++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   N
Sbjct: 59  QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 117

Query: 123 INNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCEL 181
           I  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L
Sbjct: 118 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQRL 176

Query: 182 FRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVK 239
              G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK
Sbjct: 177 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVK 236


>gi|326427340|gb|EGD72910.1| ubiquitin [Salpingoeca sp. ATCC 50818]
          Length = 220

 Score =  124 bits (311), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 81/223 (36%), Positives = 128/223 (57%), Gaps = 14/223 (6%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SD+IEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL +I         FV+T T  T+ LEV  + ++ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLI---------FVKTLTGKTITLEVEPSDSIENVKAKIQD-KEGIPPDQQR 109

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   D++ +V
Sbjct: 110 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENV 169

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 170 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 212



 Score =  101 bits (251), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 70/213 (32%), Positives = 117/213 (54%), Gaps = 11/213 (5%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIHNDSG 60
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDSIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH---- 68

Query: 61  VMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDV 120
              L F      KT  L+   SD+IEN+K  I+ +EGIP  +  + + GK +E   TL  
Sbjct: 69  ---LIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 125

Query: 121 LNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDC 179
            NI  E TL ++   +   +IFV+T T  T+ LEV  + ++ +VK  ++  +  IP +  
Sbjct: 126 YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKIQD-KEGIPPDQQ 184

Query: 180 ELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
            L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 185 RLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 217


>gi|302393786|sp|P22589.2|UBIQP_PHYIN RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
           Flags: Precursor
 gi|3176|emb|CAA39250.1| ubiquitin [Phytophthora infestans]
 gi|348684114|gb|EGZ23929.1| hypothetical protein PHYSODRAFT_284823 [Phytophthora sojae]
          Length = 229

 Score =  123 bits (309), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 78/223 (34%), Positives = 131/223 (58%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L    SD+I+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLDVEPSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ L+V  + ++ +VK+ ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDSIDNVKQKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I L+V   D++ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDSIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score =  100 bits (249), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 69/216 (31%), Positives = 122/216 (56%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LDVEPSDSIDNVKQKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L    SD+I+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLDVEPSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ L+V  + ++ +VK+ ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDSIDNVKQKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 226


>gi|339233042|ref|XP_003381638.1| ubiquitin family protein [Trichinella spiralis]
 gi|316979524|gb|EFV62308.1| ubiquitin family protein [Trichinella spiralis]
          Length = 274

 Score =  123 bits (309), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 84/231 (36%), Positives = 130/231 (56%), Gaps = 13/231 (5%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 10  MQIFVKTLTG-KTITLEVEPSDTIENVKGKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 68

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 69  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKSKIQD-KEGIPPDQQR 127

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ + L+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 128 LIFAGKQLEDGRMLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 187

Query: 239 KDKLFREIGQAPDSQRLVFKR--------QQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F          +QLED R LA Y I  ES ++L
Sbjct: 188 KGKIQDKEGIPPDQQRLIFAEFMCMAFIGKQLEDGRTLADYNIQKESTLHL 238



 Score =  102 bits (255), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 79/239 (33%), Positives = 128/239 (53%), Gaps = 18/239 (7%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 24  LEVEPSDTIENVKGKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 81

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E    
Sbjct: 82  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRM 140

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++      P 
Sbjct: 141 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKGKIQDKEGIPPD 200

Query: 177 ED--------CELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYI 225
           +         C  F  G+QL++ +TLA Y+I++   L ++  ++    IFVK   G+ +
Sbjct: 201 QQRLIFAEFMCMAFI-GKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTPTGKSL 258



 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/72 (48%), Positives = 45/72 (62%)

Query: 210 HVKHSIFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLA 269
           H K  IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+F  +QLED R L+
Sbjct: 7   HRKMQIFVKTLTGKTITLEVEPSDTIENVKGKIQDKEGIPPDQQRLIFAGKQLEDGRTLS 66

Query: 270 SYKIVNESIVNL 281
            Y I  ES ++L
Sbjct: 67  DYNIQKESTLHL 78


>gi|339232978|ref|XP_003381606.1| ubiquitin family protein [Trichinella spiralis]
 gi|316979561|gb|EFV62340.1| ubiquitin family protein [Trichinella spiralis]
          Length = 315

 Score =  123 bits (308), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 79/203 (38%), Positives = 120/203 (59%), Gaps = 4/203 (1%)

Query: 82  SDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEI 141
           SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   NI  E TL ++   +   +I
Sbjct: 10  SDTIENVKGKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQI 69

Query: 142 FVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIK 200
           FV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TL+ Y+I+
Sbjct: 70  FVKTLTGKTITLEVEPSDTIENVKGKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 128

Query: 201 ENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFK 258
           +   L ++  ++    IFVK L G+ I LEV   DTV +VK K+  + G  PD QRL+F 
Sbjct: 129 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTVENVKGKIQDKEGIPPDQQRLIFA 188

Query: 259 RQQLEDDRNLASYKIVNESIVNL 281
            +QLED R L+ Y I  ES ++L
Sbjct: 189 GKQLEDSRTLSDYNIQKESTLHL 211



 Score =  107 bits (266), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 79/237 (33%), Positives = 129/237 (54%), Gaps = 8/237 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
             V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 5   WAVEPSDTIENVKGKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 62

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 63  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKGKIQDKEGIPPDQQRLIFAGKQLEDGRT 121

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + TV +VK  ++  +  IP 
Sbjct: 122 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTVENVKGKIQD-KEGIPP 180

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSIFVKLLNGRYIILEVAKFD 233
           +   L   G+QL++ +TL+ Y+I++   L ++  ++    + L +  + I+    FD
Sbjct: 181 DQQRLIFAGKQLEDSRTLSDYNIQKESTLHLVLRLRGGCGIFLSHRCWKIMMWTVFD 237


>gi|140083661|gb|ABO84843.1| ubiquitin B [Sus scrofa]
          Length = 209

 Score =  123 bits (308), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 79/210 (37%), Positives = 123/210 (58%), Gaps = 5/210 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNL 268
           K K+  + G  PD QRL+F  +QLED R L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 208



 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 71/198 (35%), Positives = 112/198 (56%), Gaps = 8/198 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTL 194
           +   L   G+QL++ +TL
Sbjct: 191 DQQRLIFAGKQLEDGRTL 208



 Score = 92.0 bits (227), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 56/145 (38%), Positives = 88/145 (60%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TL+ Y+
Sbjct: 2   QIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F  +QLED R L+ Y I  ES ++L
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHL 145


>gi|57282601|emb|CAD27944.1| polyubiquitin-like [Oryza sativa]
          Length = 219

 Score =  122 bits (306), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 81/220 (36%), Positives = 127/220 (57%), Gaps = 5/220 (2%)

Query: 63  KLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLN 122
           +++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   N
Sbjct: 2   QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 123 INNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCEL 181
           I  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQRL 119

Query: 182 FRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVK 239
              G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVK 179

Query: 240 DKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIV 279
            K+  + G    S+RL+F  +QLED R LA Y I  ES +
Sbjct: 180 AKIQDKEGIHQTSKRLIFAGKQLEDGRTLADYNIQKESTL 219



 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 72/209 (34%), Positives = 117/209 (55%), Gaps = 8/209 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  I  
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIHQ 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVL 205
               L   G+QL++ +TLA Y+I++   L
Sbjct: 191 TSKRLIFAGKQLEDGRTLADYNIQKESTL 219



 Score = 94.4 bits (233), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 58/145 (40%), Positives = 88/145 (60%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TLA Y+
Sbjct: 2   QIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F  +QLED R LA Y I  ES ++L
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHL 145


>gi|290974051|ref|XP_002669760.1| polyubiquitin [Naegleria gruberi]
 gi|284083311|gb|EFC37016.1| polyubiquitin [Naegleria gruberi]
          Length = 274

 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 98/284 (34%), Positives = 151/284 (53%), Gaps = 35/284 (12%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIHNDSG 60
           ++V+  + IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESNDTIENVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH---- 68

Query: 61  VMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDV 120
            + L  KT     T E+++N  DTIEN+K+        P     I          ++L V
Sbjct: 69  -LTLTGKTI----TLEVESN--DTIENVKY--------PSRSTKID---------LSL-V 103

Query: 121 LNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDC 179
            N   E TL ++   +   +IFV+T T  T+ LEV    T+ +VK  ++  +  IP +  
Sbjct: 104 SNWKMESTLHLVLRLRGGMQIFVKTLTGKTITLEVESNDTIENVKSKIQD-KEGIPPDQQ 162

Query: 180 ELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRD 237
            L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +
Sbjct: 163 RLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESNDTIEN 222

Query: 238 VKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 223 VKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 266



 Score = 95.9 bits (237), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 72/220 (32%), Positives = 107/220 (48%), Gaps = 30/220 (13%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   +DTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESNDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTSTVKLEVRRAHTVLDVKKMVESMRICIPSEDCEL 181
           NI  E TL +    K            T+ LEV    T+ +VK    S +I         
Sbjct: 60  NIQKESTLHLTLTGK------------TITLEVESNDTIENVKYPSRSTKI--------- 98

Query: 182 FRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSIFVKLLNGRYIILEVAKFDTVRDVKDK 241
                   +L  ++ + ++    L +       IFVK L G+ I LEV   DT+ +VK K
Sbjct: 99  --------DLSLVSNWKMESTLHLVLRLRGGMQIFVKTLTGKTITLEVESNDTIENVKSK 150

Query: 242 LFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           +  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 151 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 190



 Score = 76.3 bits (186), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 50/135 (37%), Positives = 76/135 (56%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+  + IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 136 LEVESNDTIENVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 193

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   +DTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 194 LRGGMQIFVKTLTG-KTITLEVESNDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 252

Query: 118 LDVLNINNEDTLQMI 132
           L   NI  E TL ++
Sbjct: 253 LSDYNIQKESTLHLV 267



 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 35/71 (49%), Positives = 45/71 (63%)

Query: 215 IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIV 274
           IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+F  +QLED R L+ Y I 
Sbjct: 3   IFVKTLTGKTITLEVESNDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 62

Query: 275 NESIVNLTDLG 285
            ES ++LT  G
Sbjct: 63  KESTLHLTLTG 73


>gi|118399883|ref|XP_001032265.1| Ubiquitin family protein [Tetrahymena thermophila]
 gi|89286605|gb|EAR84602.1| Ubiquitin family protein [Tetrahymena thermophila SB210]
          Length = 1252

 Score =  121 bits (304), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 79/212 (37%), Positives = 123/212 (58%), Gaps = 4/212 (1%)

Query: 73   KTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMI 132
            KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   NI  E TL ++
Sbjct: 1034 KTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 1093

Query: 133  SVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNL 191
               +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP +   L   G+QL++ 
Sbjct: 1094 LRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQD-KEGIPPDQQRLIFAGKQLEDG 1152

Query: 192  KTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQA 249
            +TL+ Y+I++   L ++  ++    IFVK L G+ I L+V   DT+ +VK K+  + G  
Sbjct: 1153 RTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIP 1212

Query: 250  PDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
            PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 1213 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 1244



 Score =  101 bits (251), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 73/216 (33%), Positives = 121/216 (56%), Gaps = 8/216 (3%)

Query: 1    MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
            + V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 1038 LDVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 1095

Query: 58   DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
              G M+++ KT +  KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 1096 LRGGMQIFVKTLTG-KTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 1154

Query: 118  LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
            L   NI  E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP 
Sbjct: 1155 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQD-KEGIPP 1213

Query: 177  EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
            +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 1214 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 1249


>gi|361584495|gb|AEW12070.1| polyubiquitin, partial [Drosophila melanogaster]
          Length = 231

 Score =  121 bits (303), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 80/223 (35%), Positives = 128/223 (57%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +E  P     + +GGK +E+  TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEENPPEHQRLIFGGKHLENGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E T+ ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++      P E   
Sbjct: 60  NIQKESTIYLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEEN-PPEHQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L  GG+ L+N +TL+ Y+I++   + ++  ++    IFVK L G+ I LEV   D++ +V
Sbjct: 119 LIFGGKHLENGRTLSDYNIQKESTIYLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K ++  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KARIHDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/219 (31%), Positives = 120/219 (54%), Gaps = 8/219 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  EE   +   L + G+ LENG T+ DY I   S I+    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EENPPEHQRLIFGGKHLENGRTLSDYNIQKESTIYLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +E  P     + +GGK +E+  T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEENPPEHQRLIFGGKHLENGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E T+ ++   +   +IFV+T T  T+ LEV  + ++ +VK  +   +  IP 
Sbjct: 132 LSDYNIQKESTIYLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKARIHD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSI 215
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  +
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 229


>gi|145498417|ref|XP_001435196.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124402326|emb|CAK67799.1| unnamed protein product [Paramecium tetraurelia]
          Length = 369

 Score =  120 bits (302), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 93/284 (32%), Positives = 148/284 (52%), Gaps = 16/284 (5%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIHNDSG 60
           + V+ ++ I+ +K +I  K  E I  D   L +A     + +  I  GI       N S 
Sbjct: 91  LDVEPSDTIDAVKAKIQDK--EGIPPDQQRLIFAEH---SQIITIQRGI-------NPSL 138

Query: 61  VMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDV 120
             K+  +     KT  L    SDTI+ +K  I+ +EGIP  +  + + GK +E   TL  
Sbjct: 139 GFKIKRRNTLTGKTITLDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 198

Query: 121 LNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDC 179
            NI  E TL ++   +   +IFV+T T  T+ L+V  + T+  VK  ++  +  IP +  
Sbjct: 199 YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDAVKAKIQD-KEGIPPDQQ 257

Query: 180 ELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRD 237
            L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I L+V   DT+  
Sbjct: 258 RLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDA 317

Query: 238 VKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 318 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 361



 Score =  117 bits (294), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 92/291 (31%), Positives = 148/291 (50%), Gaps = 30/291 (10%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LDVEPSDTIDAVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGK----LIE 113
             G M+++ KT +  KT  L    SDTI+ +K  I+ +EGIP  +  + +        I+
Sbjct: 73  LRGGMQIFVKTLTG-KTITLDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAEHSQIITIQ 131

Query: 114 SYITLDV-LNINNEDTLQMISVPKELQEIFVQTPTSTVKLEVRRAHTVLDVKKMVESMRI 172
             I   +   I   +TL                   T+ L+V  + T+  VK  ++  + 
Sbjct: 132 RGINPSLGFKIKRRNTLT----------------GKTITLDVEPSDTIDAVKAKIQD-KE 174

Query: 173 CIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVA 230
            IP +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I L+V 
Sbjct: 175 GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVE 234

Query: 231 KFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
             DT+  VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 235 PSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 285



 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 70/212 (33%), Positives = 117/212 (55%), Gaps = 8/212 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 155 LDVEPSDTIDAVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 212

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L    SDTI+ +K  I+ +EGIP  +  + + GK +E   T
Sbjct: 213 LRGGMQIFVKTLTG-KTITLDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 271

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ L+V  + T+  VK  ++  +  IP 
Sbjct: 272 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDAVKAKIQD-KEGIPP 330

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQII 208
           +   L   G+QL++ +TL+ Y+I++   L ++
Sbjct: 331 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 362



 Score = 95.9 bits (237), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 71/226 (31%), Positives = 114/226 (50%), Gaps = 23/226 (10%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L    SDTI+ +K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ L+V  + T+  VK  ++      P +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDAVKAKIQDKEGIPPDQQRL 119

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSIFVKL-----LNGRYIILEVAKFDTV 235
           +F                 + ++++ I R +  S+  K+     L G+ I L+V   DT+
Sbjct: 120 IF----------------AEHSQIITIQRGINPSLGFKIKRRNTLTGKTITLDVEPSDTI 163

Query: 236 RDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
             VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 164 DAVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 209


>gi|27734375|gb|AAM51216.1| polyubiquitin [Cercomonas sp. ATCC 50316]
          Length = 255

 Score =  120 bits (302), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 80/216 (37%), Positives = 121/216 (56%), Gaps = 8/216 (3%)

Query: 73  KTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMI 132
           KT  L    SDTIE +K  I+ +EGIP  +  + + GK +E   TL   NI  E TL ++
Sbjct: 4   KTITLDVESSDTIETVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 63

Query: 133 SVPK--ELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQ 189
              +     +IFV+T T  T+ L+V  + T+  VK+ ++  +  IP +   L   G+QL+
Sbjct: 64  LRLRGGSGMQIFVKTLTGKTITLDVESSDTIETVKQKIQD-KEGIPPDQQRLIFAGKQLE 122

Query: 190 NLKTLAYYDIKENEVLQIIRHVKHS----IFVKLLNGRYIILEVAKFDTVRDVKDKLFRE 245
           + +TLA Y+I++   L ++  ++      IFVK L G+ I L+V   DT+  VK K+  +
Sbjct: 123 DGRTLADYNIQKESTLHLVLRLRGGSGMQIFVKTLTGKTITLDVESSDTIETVKQKIQDK 182

Query: 246 IGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
            G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 183 EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 218



 Score =  117 bits (292), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 87/252 (34%), Positives = 137/252 (54%), Gaps = 18/252 (7%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---- 56
           + V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 8   LDVESSDTIETVKQKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 65

Query: 57  --NDSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIES 114
               SG M+++ KT +  KT  L    SDTIE +K  I+ +EGIP  +  + + GK +E 
Sbjct: 66  LRGGSG-MQIFVKTLTG-KTITLDVESSDTIETVKQKIQDKEGIPPDQQRLIFAGKQLED 123

Query: 115 YITLDVLNINNEDTLQMISVPK--ELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMR 171
             TL   NI  E TL ++   +     +IFV+T T  T+ L+V  + T+  VK+ ++  +
Sbjct: 124 GRTLADYNIQKESTLHLVLRLRGGSGMQIFVKTLTGKTITLDVESSDTIETVKQKIQD-K 182

Query: 172 ICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS----IFVKLLNGRYIIL 227
             IP +   L   G+QL++ +TLA Y+I++   L ++  ++      IFVK L G+ I L
Sbjct: 183 EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGSGMQIFVKTLTGKTITL 242

Query: 228 EVAKFDTVRDVK 239
           +V   DT+  VK
Sbjct: 243 DVESSDTIETVK 254



 Score = 80.9 bits (198), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 62/174 (35%), Positives = 94/174 (54%), Gaps = 13/174 (7%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---- 56
           + V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 86  LDVESSDTIETVKQKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 143

Query: 57  --NDSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIES 114
               SG M+++ KT +  KT  L    SDTIE +K  I+ +EGIP  +  + + GK +E 
Sbjct: 144 LRGGSG-MQIFVKTLTG-KTITLDVESSDTIETVKQKIQDKEGIPPDQQRLIFAGKQLED 201

Query: 115 YITLDVLNINNEDTLQMISVPK--ELQEIFVQTPTS-TVKLEVRRAHTVLDVKK 165
             TL   NI  E TL ++   +     +IFV+T T  T+ L+V  + T+  VK+
Sbjct: 202 GRTLADYNIQKESTLHLVLRLRGGSGMQIFVKTLTGKTITLDVESSDTIETVKQ 255



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/62 (46%), Positives = 38/62 (61%)

Query: 220 LNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIV 279
           L G+ I L+V   DT+  VK K+  + G  PD QRL+F  +QLED R LA Y I  ES +
Sbjct: 1   LTGKTITLDVESSDTIETVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL 60

Query: 280 NL 281
           +L
Sbjct: 61  HL 62


>gi|83305995|emb|CAE00783.1| polyubiquitin homolog [Sordaria macrospora]
          Length = 208

 Score =  120 bits (302), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 76/207 (36%), Positives = 121/207 (58%), Gaps = 4/207 (1%)

Query: 77  LKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMISVPK 136
           L+   SDTI+N+K  I+ +E IP  +  + + GK +E   TL   NI  E TL ++   +
Sbjct: 3   LEVESSDTIDNVKQKIQDKEDIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 62

Query: 137 ELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLA 195
              +IFV+T T  T+ LEV  + T+ +VK+ ++  +  IP +   L   G+QL++ +TL+
Sbjct: 63  GGMQIFVKTLTGKTITLEVESSDTIDNVKQKIQD-KEGIPPDQQRLIFAGKQLEDGRTLS 121

Query: 196 YYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQ 253
            Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD Q
Sbjct: 122 DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKQKIQDKEGIPPDQQ 181

Query: 254 RLVFKRQQLEDDRNLASYKIVNESIVN 280
           RL+F  +QLED R L+ Y I  ES ++
Sbjct: 182 RLIFAGKQLEDGRTLSDYNIQKESTLH 208



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 72/209 (34%), Positives = 121/209 (57%), Gaps = 8/209 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E+I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 3   LEVESSDTIDNVKQKIQDK--EDIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 60

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 61  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT 119

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK+ ++  +  IP 
Sbjct: 120 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKQKIQD-KEGIPP 178

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVL 205
           +   L   G+QL++ +TL+ Y+I++   L
Sbjct: 179 DQQRLIFAGKQLEDGRTLSDYNIQKESTL 207



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 50/134 (37%), Positives = 81/134 (60%), Gaps = 3/134 (2%)

Query: 150 VKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIR 209
           + LEV  + T+ +VK+ ++  +  IP +   L   G+QL++ +TL+ Y+I++   L ++ 
Sbjct: 1   ITLEVESSDTIDNVKQKIQD-KEDIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 59

Query: 210 HVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRN 267
            ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+F  +QLED R 
Sbjct: 60  RLRGGMQIFVKTLTGKTITLEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT 119

Query: 268 LASYKIVNESIVNL 281
           L+ Y I  ES ++L
Sbjct: 120 LSDYNIQKESTLHL 133



 Score = 38.9 bits (89), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 21/56 (37%), Positives = 34/56 (60%), Gaps = 2/56 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH 56
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H
Sbjct: 155 LEVESSDTIDNVKQKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 208


>gi|361584499|gb|AEW12072.1| polyubiquitin, partial [Drosophila melanogaster]
          Length = 231

 Score =  120 bits (301), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 80/223 (35%), Positives = 127/223 (56%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M ++ KT +  KT  L+   SDTIEN+K  I+ +E  P     + +GGK +E+  TL   
Sbjct: 1   MHIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEENPPEHQRLIFGGKHLENGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E T+ ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++      P E   
Sbjct: 60  NIQKESTIYLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEEN-PPEHQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L  GG+ L+N +TL+ Y+I++   + ++  ++    IFVK L G+ I LEV   D++ +V
Sbjct: 119 LIFGGKHLENGRTLSDYNIQKESTIYLVLRLRGGMQIFVKTLTGKTITLEVEPSDSLENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K ++  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KARIHDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score = 91.7 bits (226), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 69/212 (32%), Positives = 117/212 (55%), Gaps = 8/212 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  EE   +   L + G+ LENG T+ DY I   S I+    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EENPPEHQRLIFGGKHLENGRTLSDYNIQKESTIYLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +E  P     + +GGK +E+  T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEENPPEHQRLIFGGKHLENGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E T+ ++   +   +IFV+T T  T+ LEV  + ++ +VK  +   +  IP 
Sbjct: 132 LSDYNIQKESTIYLVLRLRGGMQIFVKTLTGKTITLEVEPSDSLENVKARIHD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQII 208
           +   L   G+QL++ +TL+ Y+I++   L ++
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 222


>gi|773586|emb|CAA35579.1| ubiquitin [Tetrahymena pyriformis]
          Length = 264

 Score =  120 bits (300), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 82/248 (33%), Positives = 135/248 (54%), Gaps = 10/248 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V  T+ IE +K +I  K  E I  D   L +AG+QLE G TV DY I   S +H    
Sbjct: 15  LDVASTDNIENIKQKIQDK--EGIPSDQQRLIFAGKQLEEGRTVSDYNIQKESTVHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L   ++D IENIK  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQVFVKTLTG-KTITLDVAQTDNIENIKAKIQDKEGIPSDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           +   NI  E TL ++   +   ++FV+T T  T+ LEV  +  +  +K  ++  +  IPS
Sbjct: 132 VSDYNIQKESTLHLVLRLRGGMQVFVKTLTGKTITLEVNSSDNIESIKSKIQD-KEGIPS 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ + ++ Y+I++   L ++  ++    +FVK L G+ I L+V   D 
Sbjct: 191 DQQRLIFAGKQLEDGRNISDYNIQKESTLHLVLRLRGGMQVFVKTLTGKTITLDVDSSDN 250

Query: 235 VRDVKDKL 242
           + +VK K+
Sbjct: 251 IENVKAKI 258



 Score =  117 bits (293), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 73/223 (32%), Positives = 127/223 (56%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L    +D IENIK  I+ +EGIP  +  + + GK +E   T+   
Sbjct: 1   MQIFVKTLTG-KTVTLDVASTDNIENIKQKIQDKEGIPSDQQRLIFAGKQLEEGRTVSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E T+ ++   +   ++FV+T T  T+ L+V +   + ++K  ++  +  IPS+   
Sbjct: 60  NIQKESTVHLVLRLRGGMQVFVKTLTGKTITLDVAQTDNIENIKAKIQD-KEGIPSDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +T++ Y+I++   L ++  ++    +FVK L G+ I LEV   D +  +
Sbjct: 119 LIFAGKQLEDGRTVSDYNIQKESTLHLVLRLRGGMQVFVKTLTGKTITLEVNSSDNIESI 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G   D QRL+F  +QLED RN++ Y I  ES ++L
Sbjct: 179 KSKIQDKEGIPSDQQRLIFAGKQLEDGRNISDYNIQKESTLHL 221



 Score = 87.8 bits (216), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 60/172 (34%), Positives = 95/172 (55%), Gaps = 7/172 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V +T+ IE +K +I  K  E I  D   L +AG+QLE+G TV DY I   S +H    
Sbjct: 91  LDVAQTDNIENIKAKIQDK--EGIPSDQQRLIFAGKQLEDGRTVSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+ N SD IE+IK  I+ +EGIP  +  + + GK +E    
Sbjct: 149 LRGGMQVFVKTLTG-KTITLEVNSSDNIESIKSKIQDKEGIPSDQQRLIFAGKQLEDGRN 207

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVE 168
           +   NI  E TL ++   +   ++FV+T T  T+ L+V  +  + +VK  ++
Sbjct: 208 ISDYNIQKESTLHLVLRLRGGMQVFVKTLTGKTITLDVDSSDNIENVKAKIQ 259



 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 38/101 (37%), Positives = 57/101 (56%), Gaps = 6/101 (5%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V  ++ IE +K +I  K  E I  D   L +AG+QLE+G  + DY I   S +H    
Sbjct: 167 LEVNSSDNIESIKSKIQDK--EGIPSDQQRLIFAGKQLEDGRNISDYNIQKESTLHLVLR 224

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGI 98
             G M+++ KT +  KT  L  + SD IEN+K  I+ +EGI
Sbjct: 225 LRGGMQVFVKTLTG-KTITLDVDSSDNIENVKAKIQDKEGI 264


>gi|361584493|gb|AEW12069.1| polyubiquitin, partial [Drosophila melanogaster]
 gi|361584497|gb|AEW12071.1| polyubiquitin, partial [Drosophila melanogaster]
          Length = 231

 Score =  119 bits (299), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 79/223 (35%), Positives = 128/223 (57%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +E  P     + +GGK +E+  TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIKNVKAKIQDKEENPPEHQRLIFGGKHLENGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E T+ ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++      P E   
Sbjct: 60  NIQKESTIYLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEEN-PPEHQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L  GG+ L+N +TL+ Y+I++   + ++  ++    IFVK L G+ I LEV   D++ +V
Sbjct: 119 LIFGGKHLENGRTLSDYNIQKESTIYLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K ++  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KARIHDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score = 90.5 bits (223), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 68/219 (31%), Positives = 120/219 (54%), Gaps = 8/219 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  EE   +   L + G+ LENG T+ DY I   S I+    
Sbjct: 15  LEVEPSDTIKNVKAKIQDK--EENPPEHQRLIFGGKHLENGRTLSDYNIQKESTIYLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +E  P     + +GGK +E+  T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEENPPEHQRLIFGGKHLENGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E T+ ++   +   +IFV+T T  T+ LEV  + ++ +VK  +   +  IP 
Sbjct: 132 LSDYNIQKESTIYLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKARIHD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSI 215
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  +
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 229


>gi|378747684|gb|AFC36452.1| ubiquitin, partial [Anoectochilus roxburghii]
          Length = 214

 Score =  119 bits (299), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 79/215 (36%), Positives = 124/215 (57%), Gaps = 8/215 (3%)

Query: 34  AGQQLENGLTVIDYGIPNNSVIH---NDSGVMKLYFKTPSNEKTFELKANRSDTIENIKF 90
           AG+QLE+G T+ DY I   S +H      G M+++ KT +  KT  L+   SDTI+N+K 
Sbjct: 1   AGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG-KTITLEVESSDTIDNVKA 59

Query: 91  IIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEIFVQTPTS-T 149
            I+ +EGIP  +  + + GK +E   TL   NI  E TL ++   +   +IFV+T T  T
Sbjct: 60  KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 119

Query: 150 VKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIR 209
           + LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TLA Y+I++   L ++ 
Sbjct: 120 ITLEVESSDTIDNVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 178

Query: 210 HVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKL 242
            ++    IFVK L G+ I LEV   DT+ +VK K+
Sbjct: 179 RLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKI 213



 Score =  104 bits (259), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 68/176 (38%), Positives = 102/176 (57%), Gaps = 4/176 (2%)

Query: 109 GKLIESYITLDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMV 167
           GK +E   TL   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  +
Sbjct: 2   GKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKI 61

Query: 168 ESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYI 225
           +  +  IP +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I
Sbjct: 62  QD-KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTI 120

Query: 226 ILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
            LEV   DT+ +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 121 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 176



 Score = 89.4 bits (220), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 61/171 (35%), Positives = 97/171 (56%), Gaps = 7/171 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 46  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 103

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 104 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 162

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMV 167
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  +
Sbjct: 163 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKI 213


>gi|60417384|emb|CAI59819.1| ubiquitin [Nyctotherus ovalis]
          Length = 208

 Score =  119 bits (298), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 78/208 (37%), Positives = 116/208 (55%), Gaps = 4/208 (1%)

Query: 73  KTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMI 132
           KT  L    +DTIE +K  I+ +EGIP  +  + + GK +E   TL   NI  E TL ++
Sbjct: 1   KTITLDVEPNDTIEQVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 60

Query: 133 SVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNL 191
              +   +IFV+T T  T+ L+V    T+  VK  ++  +  IP +   L   G+QL++ 
Sbjct: 61  LRLRGGMQIFVKTLTGKTITLDVEPNDTIEQVKAKIQD-KEGIPPDQQRLIFAGKQLEDG 119

Query: 192 KTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQA 249
           +TLA Y+I++   L ++  ++    IFVK L G+ I L+V   DT+  VK K+  + G  
Sbjct: 120 RTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPNDTIEQVKAKIQDKEGIP 179

Query: 250 PDSQRLVFKRQQLEDDRNLASYKIVNES 277
           PD QRL+F  +QLED R LA Y I  ES
Sbjct: 180 PDQQRLIFAGKQLEDGRTLADYNIQKES 207



 Score = 98.2 bits (243), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 71/205 (34%), Positives = 113/205 (55%), Gaps = 8/205 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+  + IE++K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 5   LDVEPNDTIEQVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 62

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L    +DTIE +K  I+ +EGIP  +  + + GK +E   T
Sbjct: 63  LRGGMQIFVKTLTG-KTITLDVEPNDTIEQVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 121

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ L+V    T+  VK  ++  +  IP 
Sbjct: 122 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPNDTIEQVKAKIQD-KEGIPP 180

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKE 201
           +   L   G+QL++ +TLA Y+I++
Sbjct: 181 DQQRLIFAGKQLEDGRTLADYNIQK 205



 Score = 84.3 bits (207), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 51/135 (37%), Positives = 78/135 (57%), Gaps = 3/135 (2%)

Query: 149 TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQII 208
           T+ L+V    T+  VK  ++  +  IP +   L   G+QL++ +TLA Y+I++   L ++
Sbjct: 2   TITLDVEPNDTIEQVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 60

Query: 209 RHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDR 266
             ++    IFVK L G+ I L+V   DT+  VK K+  + G  PD QRL+F  +QLED R
Sbjct: 61  LRLRGGMQIFVKTLTGKTITLDVEPNDTIEQVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 120

Query: 267 NLASYKIVNESIVNL 281
            LA Y I  ES ++L
Sbjct: 121 TLADYNIQKESTLHL 135



 Score = 71.6 bits (174), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 48/131 (36%), Positives = 71/131 (54%), Gaps = 6/131 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+  + IE++K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 81  LDVEPNDTIEQVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 138

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L    +DTIE +K  I+ +EGIP  +  + + GK +E   T
Sbjct: 139 LRGGMQIFVKTLTG-KTITLDVEPNDTIEQVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 197

Query: 118 LDVLNINNEDT 128
           L   NI  E T
Sbjct: 198 LADYNIQKEST 208


>gi|361584491|gb|AEW12068.1| polyubiquitin, partial [Drosophila melanogaster]
          Length = 231

 Score =  119 bits (297), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 79/223 (35%), Positives = 127/223 (56%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M ++ KT +  KT  L+   SDTI+N+K  I+ +E  P     + +GGK +E+  TL   
Sbjct: 1   MHIFVKTLTG-KTITLEVEPSDTIKNVKAKIQDKEENPPEHQRLIFGGKHLENGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E T+ ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++      P E   
Sbjct: 60  NIQKESTIYLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEEN-PPEHQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L  GG+ L+N +TL+ Y+I++   + ++  ++    IFVK L G+ I LEV   D++ +V
Sbjct: 119 LIFGGKHLENGRTLSDYNIQKESTIYLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K ++  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KARIHDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score = 90.5 bits (223), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 68/212 (32%), Positives = 117/212 (55%), Gaps = 8/212 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  EE   +   L + G+ LENG T+ DY I   S I+    
Sbjct: 15  LEVEPSDTIKNVKAKIQDK--EENPPEHQRLIFGGKHLENGRTLSDYNIQKESTIYLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +E  P     + +GGK +E+  T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEENPPEHQRLIFGGKHLENGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E T+ ++   +   +IFV+T T  T+ LEV  + ++ +VK  +   +  IP 
Sbjct: 132 LSDYNIQKESTIYLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKARIHD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQII 208
           +   L   G+QL++ +TL+ Y+I++   L ++
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 222


>gi|361584485|gb|AEW12065.1| polyubiquitin, partial [Drosophila melanogaster]
 gi|361584487|gb|AEW12066.1| polyubiquitin, partial [Drosophila melanogaster]
 gi|361584489|gb|AEW12067.1| polyubiquitin, partial [Drosophila melanogaster]
 gi|361584501|gb|AEW12073.1| polyubiquitin, partial [Drosophila melanogaster]
          Length = 231

 Score =  119 bits (297), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 79/223 (35%), Positives = 127/223 (56%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +E  P     + +GGK +E+  TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEENPPEHQRLIFGGKHLENGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E T+ ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++      P E   
Sbjct: 60  NIQKESTIYLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEEN-PPEHQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+ L+N +TL+ Y+I++   + ++  ++    IFVK L G+ I LEV   D++ +V
Sbjct: 119 LIFAGKHLENGRTLSDYNIQKESTIYLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K ++  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 KARIHDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 68/219 (31%), Positives = 119/219 (54%), Gaps = 8/219 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  EE   +   L + G+ LENG T+ DY I   S I+    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EENPPEHQRLIFGGKHLENGRTLSDYNIQKESTIYLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +E  P     + + GK +E+  T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEENPPEHQRLIFAGKHLENGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E T+ ++   +   +IFV+T T  T+ LEV  + ++ +VK  +   +  IP 
Sbjct: 132 LSDYNIQKESTIYLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKARIHD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSI 215
           +   L   G+QL++ +TL+ Y+I++   L ++  ++  +
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 229


>gi|392569339|gb|EIW62512.1| ubiquitin-domain-containing protein [Trametes versicolor FP-101664
           SS1]
          Length = 769

 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 89/284 (31%), Positives = 155/284 (54%), Gaps = 13/284 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIHNDSG 60
           ++VK  + I  +K +I AK  E    D   + +A  +LE   T++DY I  NS +    G
Sbjct: 471 LEVKPLDTIGSIKTKIQAK--EGTPPDQQCVKFADDELEEDRTLLDYNIQWNSTLQL-VG 527

Query: 61  VMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGI-PVHEYDIYYGGKLIESYITLD 119
             +++ K     +T  L+   SDTI+++K   + +EG+ P H+  + + GKL++    L 
Sbjct: 528 RFQIFVKRALTRETTPLEVKSSDTIKDVKEKYQDKEGVAPAHQR-LIFAGKLLQDGCVLS 586

Query: 120 VLNINNEDTLQM-ISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSE 177
              I  E TL + I +P    +IFV++ T  T+ ++ + + T+  V++ +  +    P  
Sbjct: 587 DCGIQKESTLHLVIRLPG--MQIFVKSFTGKTITIKAKPSDTIGRVREKIRDVEGISP-- 642

Query: 178 DCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSIFVKLLNGRYIILEVAKFDTVRD 237
           D  L   G++L++ + L+ Y+I+  + L +IR+ +  IFV+ + G+ + LE   FDTV +
Sbjct: 643 DSILKFAGKELEDGRLLSDYNIQGEDTLHLIRYFQ--IFVRSMRGKTVTLEAEPFDTVEN 700

Query: 238 VKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           VK K+  + G  PD QRL+F  +QL D R L+ Y I N S ++L
Sbjct: 701 VKAKIHDKEGCPPDLQRLIFAGKQLVDGRTLSDYSIPNNSTLHL 744



 Score =  116 bits (291), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 81/231 (35%), Positives = 128/231 (55%), Gaps = 17/231 (7%)

Query: 61  VMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREG-------IPVHEYDIYYGGKLIE 113
            M+ Y KT +  KT  L+   SDTI+N+K  I+ +EG       +P  +  + + GK +E
Sbjct: 45  TMQTYLKTLTG-KTITLEVESSDTIDNVKAKIQDKEGTDIPSASLPPDQQRLIFAGKQLE 103

Query: 114 SYITLDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRI 172
              TL   +I  E TL +  +     +IFV+T T  T+ LEV  + T+ +VK  ++  + 
Sbjct: 104 DGRTLSDYSIQKESTLHLGGM-----QIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KE 157

Query: 173 CIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVA 230
            IP +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV 
Sbjct: 158 GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 217

Query: 231 KFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
             DT+ + K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 218 SSDTIDNSKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 268



 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 70/214 (32%), Positives = 120/214 (56%), Gaps = 10/214 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILE-----DLPELFYAGQQLENGLTVIDYGIPNNSVI 55
           ++V+ ++ I+ +K +I  K   +I       D   L +AG+QLE+G T+ DY I   S +
Sbjct: 60  LEVESSDTIDNVKAKIQDKEGTDIPSASLPPDQQRLIFAGKQLEDGRTLSDYSIQKESTL 119

Query: 56  HNDSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESY 115
           H   G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E  
Sbjct: 120 H--LGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDG 176

Query: 116 ITLDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICI 174
            TL   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ + K  ++  +  I
Sbjct: 177 RTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNSKAKIQD-KEGI 235

Query: 175 PSEDCELFRGGEQLQNLKTLAYYDIKENEVLQII 208
           P +   L   G+QL++ +TL+ Y+I++   L ++
Sbjct: 236 PPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 269



 Score =  100 bits (248), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 72/222 (32%), Positives = 122/222 (54%), Gaps = 5/222 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M ++ K P+  KT  L+A+ SDTIEN+K +I  +EG+  ++  + + GK ++S  T+   
Sbjct: 380 MLIFVKNPTVGKTIALEADSSDTIENVKAMIHDKEGVAPNQQRLIFAGKQLDSRRTVSDY 439

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           N+    T+ +I    +  +I V+T +  T+ LEV+   T+  +K  +++     P + C 
Sbjct: 440 NMRKGSTVFLIFRVLDGMQISVKTLSGKTITLEVKPLDTIGSIKTKIQAKEGTPPDQQCV 499

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSIFVK-LLNGRYIILEVAKFDTVRDVK 239
            F   ++L+  +TL  Y+I+ N  LQ++   +  IFVK  L      LEV   DT++DVK
Sbjct: 500 KF-ADDELEEDRTLLDYNIQWNSTLQLVG--RFQIFVKRALTRETTPLEVKSSDTIKDVK 556

Query: 240 DKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           +K   + G AP  QRL+F  + L+D   L+   I  ES ++L
Sbjct: 557 EKYQDKEGVAPAHQRLIFAGKLLQDGCVLSDCGIQKESTLHL 598



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 88/287 (30%), Positives = 142/287 (49%), Gaps = 15/287 (5%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIHNDSG 60
           ++   ++ IE +K  IH K  E +  +   L +AG+QL++  TV DY +   S +     
Sbjct: 395 LEADSSDTIENVKAMIHDK--EGVAPNQQRLIFAGKQLDSRRTVSDYNMRKGSTVFLIFR 452

Query: 61  V---MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
           V   M++  KT S  KT  L+    DTI +IK  I+ +EG P  +  + +    +E   T
Sbjct: 453 VLDGMQISVKTLSG-KTITLEVKPLDTIGSIKTKIQAKEGTPPDQQCVKFADDELEEDRT 511

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS--TVKLEVRRAHTVLDVKKMVESMRICIP 175
           L   NI    TLQ++       +IFV+   +  T  LEV+ + T+ DVK+  +      P
Sbjct: 512 LLDYNIQWNSTLQLVG----RFQIFVKRALTRETTPLEVKSSDTIKDVKEKYQDKEGVAP 567

Query: 176 SEDCELFRGGEQLQNLKTLAYYDIKENEVLQ-IIRHVKHSIFVKLLNGRYIILEVAKFDT 234
           +    +F  G+ LQ+   L+   I++   L  +IR     IFVK   G+ I ++    DT
Sbjct: 568 AHQRLIF-AGKLLQDGCVLSDCGIQKESTLHLVIRLPGMQIFVKSFTGKTITIKAKPSDT 626

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           +  V++K+    G +PDS  L F  ++LED R L+ Y I  E  ++L
Sbjct: 627 IGRVREKIRDVEGISPDSI-LKFAGKELEDGRLLSDYNIQGEDTLHL 672



 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 65/212 (30%), Positives = 103/212 (48%), Gaps = 14/212 (6%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++VK ++ I+ +K +   K  E +      L +AG+ L++G  + D GI   S +H    
Sbjct: 544 LEVKSSDTIKDVKEKYQDK--EGVAPAHQRLIFAGKLLQDGCVLSDCGIQKESTLHLVIR 601

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ K+ +  KT  +KA  SDTI  ++  I   EGI      + + GK +E    
Sbjct: 602 LPG-MQIFVKSFTG-KTITIKAKPSDTIGRVREKIRDVEGISPDSI-LKFAGKELEDGRL 658

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  EDTL +I       +IFV++    TV LE     TV +VK  +     C P 
Sbjct: 659 LSDYNIQGEDTLHLI----RYFQIFVRSMRGKTVTLEAEPFDTVENVKAKIHDKEGCPPD 714

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQII 208
               +F  G+QL + +TL+ Y I  N  L ++
Sbjct: 715 LQRLIF-AGKQLVDGRTLSDYSIPNNSTLHLV 745


>gi|310693627|gb|ADP05114.1| polyubiquitin 10 [Aponogeton madagascariensis]
          Length = 221

 Score =  118 bits (296), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 79/212 (37%), Positives = 120/212 (56%), Gaps = 4/212 (1%)

Query: 73  KTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMI 132
           KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   NI  E TL ++
Sbjct: 5   KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 64

Query: 133 SVPKELQEIFVQTPTSTVKLE-VRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNL 191
              +   +IFV+T T       V  + T+ +VK  ++  +  IP +   L   G+QL++ 
Sbjct: 65  LRLRGGMQIFVKTLTGETTTLEVESSDTIDNVKAKIQD-KEGIPPDQQRLIFAGKQLEDG 123

Query: 192 KTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQA 249
           +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  
Sbjct: 124 RTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIP 183

Query: 250 PDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 184 PDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 215



 Score = 98.6 bits (244), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 72/212 (33%), Positives = 120/212 (56%), Gaps = 8/212 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 9   LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 66

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT    +T  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 67  LRGGMQIFVKT-LTGETTTLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 125

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 126 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 184

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQII 208
           +   L   G+QL++ +TLA Y+I++   L ++
Sbjct: 185 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 216



 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/62 (48%), Positives = 39/62 (62%)

Query: 220 LNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIV 279
           L G+ I LEV   DT+ +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES +
Sbjct: 2   LTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL 61

Query: 280 NL 281
           +L
Sbjct: 62  HL 63


>gi|324515150|gb|ADY46106.1| Polyubiquitin-A [Ascaris suum]
          Length = 267

 Score =  117 bits (294), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 80/224 (35%), Positives = 127/224 (56%), Gaps = 7/224 (3%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT S  KT  L+   SDTIEN+K  I+ +EGIP  E  + Y G+ ++   T    
Sbjct: 1   MQIFVKTISG-KTITLEVEPSDTIENVKTKIQDKEGIPPIEQRLIYAGRHLQDCRTASDY 59

Query: 122 NINNEDTLQMI-SVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDC 179
           NI    TL ++  +P  +Q IFV+T T  T+ LEV  + T+ +VK  ++      P +  
Sbjct: 60  NIEKASTLHLLLRLPCGMQ-IFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIRPDQQR 118

Query: 180 ELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRD 237
            +F  G+QL + + +  Y+I+   ++ ++  ++    IF+K L G  + LEV   D V+ 
Sbjct: 119 LIF-AGKQLDDHQKIGDYNIRNGSIVHLVFRLRGGMLIFIKTLTGVTMTLEVELSDKVQH 177

Query: 238 VKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           VK K++ + G  PD QRL++  +QLEDDR L+ Y I  ES V+L
Sbjct: 178 VKAKIYDKEGIPPDQQRLIYAGKQLEDDRTLSDYNIQKESTVHL 221



 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 73/260 (28%), Positives = 132/260 (50%), Gaps = 20/260 (7%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLP----ELFYAGQQLENGLTVIDYGIPNNSVIH 56
           ++V+ ++ IE +K +I  K      E +P     L YAG+ L++  T  DY I   S +H
Sbjct: 15  LEVEPSDTIENVKTKIQDK------EGIPPIEQRLIYAGRHLQDCRTASDYNIEKASTLH 68

Query: 57  ---NDSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIE 113
                   M+++ KT +  KT  L+   SDTIEN+K  I+ +EGI   +  + + GK ++
Sbjct: 69  LLLRLPCGMQIFVKTLTG-KTITLEVESSDTIENVKAKIQDKEGIRPDQQRLIFAGKQLD 127

Query: 114 SYITLDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRI 172
            +  +   NI N   + ++   +    IF++T T  T+ LEV  +  V  VK  +   + 
Sbjct: 128 DHQKIGDYNIRNGSIVHLVFRLRGGMLIFIKTLTGVTMTLEVELSDKVQHVKAKIYD-KE 186

Query: 173 CIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVA 230
            IP +   L   G+QL++ +TL+ Y+I++   + ++  ++    I +  L G  + L+V 
Sbjct: 187 GIPPDQQRLIYAGKQLEDDRTLSDYNIQKESTVHLVLRLRGGMDISINTLVGDAMTLQVD 246

Query: 231 KFDTVRDVKDKLFREIGQAP 250
             D+V ++K     ++ QAP
Sbjct: 247 ASDSVENIKAD--GQVEQAP 264


>gi|195164961|ref|XP_002023314.1| GL20619 [Drosophila persimilis]
 gi|194105419|gb|EDW27462.1| GL20619 [Drosophila persimilis]
          Length = 231

 Score =  117 bits (293), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 80/224 (35%), Positives = 123/224 (54%), Gaps = 6/224 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTSTVKLEVRRA--HTVLDVKKMVESMRICIPSEDC 179
           NI  E TL ++   +   +IFV+T          RA  H     K  ++  +  IP +  
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLDWQDHHPRGRALGHHRESFKAKIQD-KEGIPPDQQ 118

Query: 180 ELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRD 237
            L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +
Sbjct: 119 RLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIEN 178

Query: 238 VKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 179 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 222



 Score = 90.1 bits (222), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 66/212 (31%), Positives = 112/212 (52%), Gaps = 7/212 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT   +             E+ K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLDWQDHHPRGRALGHHRESFKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 132

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 133 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 191

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQII 208
           +   L   G+QL++ +TL+ Y+I++   L ++
Sbjct: 192 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 223


>gi|29836445|gb|AAM78180.1| putative polyubiquitin [Gossypium herbaceum]
 gi|29836447|gb|AAM78181.1| putative polyubiquitin [Gossypium raimondii]
 gi|29836449|gb|AAM78182.1| putative polyubiquitin [Gossypium barbadense]
 gi|29836451|gb|AAM78183.1| putative polyubiquitin [Gossypium barbadense]
 gi|29836453|gb|AAM78184.1| putative polyubiquitin [Gossypioides kirkii]
          Length = 204

 Score =  116 bits (290), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 74/197 (37%), Positives = 114/197 (57%), Gaps = 4/197 (2%)

Query: 88  IKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEIFVQTPT 147
           +K  I+ +EGIP  +  + + GK +E   TL   NI  E TL ++   +   +IFV+T T
Sbjct: 1   VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLT 60

Query: 148 S-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQ 206
             T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TLA Y+I++   L 
Sbjct: 61  GKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 119

Query: 207 IIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLED 264
           ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+F  +QLED
Sbjct: 120 LVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 179

Query: 265 DRNLASYKIVNESIVNL 281
            R LA Y I  ES ++L
Sbjct: 180 GRTLADYNIQKESTLHL 196



 Score =  104 bits (260), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 70/205 (34%), Positives = 115/205 (56%), Gaps = 8/205 (3%)

Query: 16  IHAKVE--EEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---NDSGVMKLYFKTPS 70
           + AK++  E I  D   L +AG+QLE+G T+ DY I   S +H      G M+++ KT +
Sbjct: 1   VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLT 60

Query: 71  NEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQ 130
             KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   NI  E TL 
Sbjct: 61  G-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 119

Query: 131 MISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQ 189
           ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL+
Sbjct: 120 LVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQRLIFAGKQLE 178

Query: 190 NLKTLAYYDIKENEVLQIIRHVKHS 214
           + +TLA Y+I++   L ++  ++  
Sbjct: 179 DGRTLADYNIQKESTLHLVLRLRGG 203


>gi|392569336|gb|EIW62509.1| ubiquitin [Trametes versicolor FP-101664 SS1]
          Length = 397

 Score =  115 bits (289), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 74/221 (33%), Positives = 128/221 (57%), Gaps = 4/221 (1%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M++  K P+  KT  L+ + SDTIEN+K +I  +EG+  ++  + + GK ++S+ T+   
Sbjct: 1   MQISVKNPTTGKTITLEVDSSDTIENVKAMIHDKEGVAPNQQRLIFAGKQLDSHRTVSDY 60

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           N+    T+ ++    +  +IFV+T +  T+ LEV+   T+ ++K  +++     P +   
Sbjct: 61  NLRKGSTVFLMFRVLDGMQIFVKTLSGKTITLEVKPLDTIRNIKAKIQAKEGNPPDQQRI 120

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSIFVKLLNGRYIILEVAKFDTVRDVKD 240
            F   EQL++ +TL+ Y+I+ N  LQ++   +  IFVK + G    LEV   DT++DVK+
Sbjct: 121 KF-AEEQLEDDRTLSDYNIQWNSTLQLVG--RFQIFVKTVAGETTPLEVVSSDTIKDVKE 177

Query: 241 KLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K   + G  P  QRL+F  ++LEDD  L+ Y I  +S V+L
Sbjct: 178 KYRDKEGAVPAQQRLIFAGKELEDDCILSDYGIQKDSTVHL 218



 Score =  105 bits (263), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 91/287 (31%), Positives = 149/287 (51%), Gaps = 14/287 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIHNDSG 60
           ++V  ++ IE +K  IH K  E +  +   L +AG+QL++  TV DY +   S +     
Sbjct: 16  LEVDSSDTIENVKAMIHDK--EGVAPNQQRLIFAGKQLDSHRTVSDYNLRKGSTVFLMFR 73

Query: 61  V---MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
           V   M+++ KT S  KT  L+    DTI NIK  I+ +EG P  +  I +  + +E   T
Sbjct: 74  VLDGMQIFVKTLSG-KTITLEVKPLDTIRNIKAKIQAKEGNPPDQQRIKFAEEQLEDDRT 132

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI    TLQ++       +IFV+T    T  LEV  + T+ DVK+        +P+
Sbjct: 133 LSDYNIQWNSTLQLVG----RFQIFVKTVAGETTPLEVVSSDTIKDVKEKYRDKEGAVPA 188

Query: 177 EDCELFRGGEQLQNLKTLAYYDI-KENEVLQIIRHVKHSIFVKLLNGRYIILEVAKFDTV 235
           +   +F  G++L++   L+ Y I K++ V  ++R     IFVK   G+ I +E    DT+
Sbjct: 189 QQRLIF-AGKELEDDCILSDYGIQKDSTVHLVLRLPGMQIFVKSYTGKTITIEAKSSDTI 247

Query: 236 RDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNLT 282
             V++++ R+  + P    L F  ++LEDDR L+ Y I  +  ++LT
Sbjct: 248 GCVRERI-RDTKEIPSDYILKFADKELEDDRMLSDYNIQWDDTLHLT 293



 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 86/282 (30%), Positives = 151/282 (53%), Gaps = 10/282 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIHNDSG 60
           ++VK  + I  +K +I AK  E    D   + +A +QLE+  T+ DY I  NS +    G
Sbjct: 92  LEVKPLDTIRNIKAKIQAK--EGNPPDQQRIKFAEEQLEDDRTLSDYNIQWNSTLQL-VG 148

Query: 61  VMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDV 120
             +++ KT + E T  L+   SDTI+++K     +EG    +  + + GK +E    L  
Sbjct: 149 RFQIFVKTVAGETT-PLEVVSSDTIKDVKEKYRDKEGAVPAQQRLIFAGKELEDDCILSD 207

Query: 121 LNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDC 179
             I  + T+ ++     +Q IFV++ T  T+ +E + + T+  V++ +   +  IPS D 
Sbjct: 208 YGIQKDSTVHLVLRLPGMQ-IFVKSYTGKTITIEAKSSDTIGCVRERIRDTK-EIPS-DY 264

Query: 180 ELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSIFVKLLNGRYIILEVAKFDTVRDVK 239
            L    ++L++ + L+ Y+I+ ++ L + R+ +  IFVK + G+ + LE   FDTV +VK
Sbjct: 265 ILKFADKELEDDRMLSDYNIQWDDTLHLTRYFQ--IFVKTMIGKTVTLEAESFDTVENVK 322

Query: 240 DKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
            K+  + G  P  Q L+F  +QL D R L+ Y I  ES +++
Sbjct: 323 AKIQDKDGNPPHKQCLIFAGKQLVDGRTLSDYNIQKESTLHV 364



 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 64/211 (30%), Positives = 105/211 (49%), Gaps = 14/211 (6%)

Query: 31  LFYAGQQLENGLTVIDYGIPNNSVIH---NDSGVMKLYFKTPSNEKTFELKANRSDTIEN 87
           L +AG++LE+   + DYGI  +S +H      G M+++ K+ +  KT  ++A  SDTI  
Sbjct: 192 LIFAGKELEDDCILSDYGIQKDSTVHLVLRLPG-MQIFVKSYTG-KTITIEAKSSDTIGC 249

Query: 88  IKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEIFVQTPT 147
           ++  I   + IP  +Y + +  K +E    L   NI  +DTL +        +IFV+T  
Sbjct: 250 VRERIRDTKEIP-SDYILKFADKELEDDRMLSDYNIQWDDTLHLT----RYFQIFVKTMI 304

Query: 148 S-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQ 206
             TV LE     TV +VK  ++      P + C +F  G+QL + +TL+ Y+I++   L 
Sbjct: 305 GKTVTLEAESFDTVENVKAKIQDKDGNPPHKQCLIF-AGKQLVDGRTLSDYNIQKESTLH 363

Query: 207 IIRHVKHSI--FVKLLNGRYIILEVAKFDTV 235
           ++      +   V  L    I L+V   DTV
Sbjct: 364 VVWRQFGGMQPSVGTLPSEPIALDVESSDTV 394


>gi|197129049|gb|ACH45547.1| putative ubiquitin C variant 1 [Taeniopygia guttata]
          Length = 209

 Score =  115 bits (288), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 75/204 (36%), Positives = 119/204 (58%), Gaps = 5/204 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQL 262
           K K+  + G  PD QRL+F  +QL
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQL 202



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 69/192 (35%), Positives = 107/192 (55%), Gaps = 8/192 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQL 188
           +   L   G+QL
Sbjct: 191 DQQRLIFAGKQL 202



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 56/145 (38%), Positives = 88/145 (60%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TL+ Y+
Sbjct: 2   QIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F  +QLED R L+ Y I  ES ++L
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHL 145


>gi|149391359|gb|ABR25697.1| polyubiquitin containing 7 ubiquitin monomers [Oryza sativa Indica
           Group]
          Length = 201

 Score =  115 bits (287), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 73/193 (37%), Positives = 112/193 (58%), Gaps = 4/193 (2%)

Query: 92  IEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEIFVQTPTS-TV 150
           I+ +EGIP  +  + + GK +E   TL   NI  E TL ++   +   +IFV+T T  T+
Sbjct: 2   IQDKEGIPPDQQRLIFAGKQLEDGRTLXDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTI 61

Query: 151 KLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRH 210
            LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TLA Y+I++   L ++  
Sbjct: 62  TLEVESSDTIDNVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 120

Query: 211 VKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNL 268
           ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+F  +QLED R L
Sbjct: 121 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 180

Query: 269 ASYKIVNESIVNL 281
           A Y I  ES ++L
Sbjct: 181 ADYNIQKESTLHL 193



 Score =  103 bits (256), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 68/192 (35%), Positives = 109/192 (56%), Gaps = 6/192 (3%)

Query: 21  EEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---NDSGVMKLYFKTPSNEKTFEL 77
           +E I  D   L +AG+QLE+G T+ DY I   S +H      G M+++ KT +  KT  L
Sbjct: 5   KEGIPPDQQRLIFAGKQLEDGRTLXDYNIQKESTLHLVLRLRGGMQIFVKTLTG-KTITL 63

Query: 78  KANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMISVPKE 137
           +   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   NI  E TL ++   + 
Sbjct: 64  EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRG 123

Query: 138 LQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAY 196
             +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TLA 
Sbjct: 124 GMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLAD 182

Query: 197 YDIKENEVLQII 208
           Y+I++   L ++
Sbjct: 183 YNIQKESTLHLV 194


>gi|302847323|ref|XP_002955196.1| polyubiquitin [Volvox carteri f. nagariensis]
 gi|300259488|gb|EFJ43715.1| polyubiquitin [Volvox carteri f. nagariensis]
          Length = 229

 Score =  114 bits (286), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 72/223 (32%), Positives = 128/223 (57%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSIFVKL--LNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++  + +K+  L G+ I +++   DT+  +
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMMIKVKTLTGKEIEIDIEPSDTIERI 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K+++  + G  P  QRL+F  +Q+ DD+    Y I   S+++L
Sbjct: 179 KERVEEKEGIPPVQQRLIFAGKQMNDDKQAKDYNIEGGSVLHL 221



 Score = 91.3 bits (225), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 69/219 (31%), Positives = 117/219 (53%), Gaps = 8/219 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTST-VKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +    I V+T T   +++++  + T+  +K+ VE  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMMIKVKTLTGKEIEIDIEPSDTIERIKERVEE-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSI 215
               L   G+Q+ + K    Y+I+   VL ++  ++  +
Sbjct: 191 VQQRLIFAGKQMNDDKQAKDYNIEGGSVLHLVLALRGGL 229


>gi|270300599|gb|ACZ69386.1| polyubiquitin UBQ14 [Cucumis sativus]
          Length = 197

 Score =  114 bits (285), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 72/190 (37%), Positives = 110/190 (57%), Gaps = 4/190 (2%)

Query: 95  REGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLE 153
           +EGIP  +  + + GK +E   TL   NI  E TL ++   +   +IFV+T T  T+ LE
Sbjct: 1   KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 60

Query: 154 VRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKH 213
           V  + T+ +VK  ++  +  IP +   L   G+QL++ +TLA Y+I++   L ++  ++ 
Sbjct: 61  VESSDTIDNVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRG 119

Query: 214 S--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASY 271
              IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+F  +QLED R LA Y
Sbjct: 120 GMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 179

Query: 272 KIVNESIVNL 281
            I  ES ++L
Sbjct: 180 NIQKESTLHL 189



 Score =  103 bits (257), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 68/198 (34%), Positives = 111/198 (56%), Gaps = 6/198 (3%)

Query: 21  EEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---NDSGVMKLYFKTPSNEKTFEL 77
           +E I  D   L +AG+QLE+G T+ DY I   S +H      G M+++ KT +  KT  L
Sbjct: 1   KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG-KTITL 59

Query: 78  KANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMISVPKE 137
           +   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   NI  E TL ++   + 
Sbjct: 60  EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRG 119

Query: 138 LQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAY 196
             +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TLA 
Sbjct: 120 GMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLAD 178

Query: 197 YDIKENEVLQIIRHVKHS 214
           Y+I++   L ++  ++  
Sbjct: 179 YNIQKESTLHLVLRLRGG 196


>gi|302655191|ref|XP_003019389.1| hypothetical protein TRV_06592 [Trichophyton verrucosum HKI 0517]
 gi|291183107|gb|EFE38744.1| hypothetical protein TRV_06592 [Trichophyton verrucosum HKI 0517]
          Length = 438

 Score =  113 bits (283), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 76/217 (35%), Positives = 122/217 (56%), Gaps = 11/217 (5%)

Query: 61  VMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDV 120
            M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL  
Sbjct: 4   TMQIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 62

Query: 121 LNINNEDTLQMI------SVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRIC 173
            NI  E TL ++      +    + +  V+T T  T+ LEV  + T+ +VK  ++  +  
Sbjct: 63  YNIQKESTLHLVLRLRGETTTNTISQPVVKTLTGKTITLEVESSDTIDNVKTKIQD-KEG 121

Query: 174 IPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAK 231
           IP +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV  
Sbjct: 122 IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVES 181

Query: 232 FDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNL 268
            DT+ +VK K+  + G  PD QRL+F  +QLED R L
Sbjct: 182 SDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTL 218



 Score = 90.9 bits (224), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 69/206 (33%), Positives = 112/206 (54%), Gaps = 18/206 (8%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIHNDSG 60
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 19  LEVESSDTIDNVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL--- 73

Query: 61  VMKLYFKTPSNE-----------KTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGG 109
           V++L  +T +N            KT  L+   SDTI+N+K  I+ +EGIP  +  + + G
Sbjct: 74  VLRLRGETTTNTISQPVVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAG 133

Query: 110 KLIESYITLDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVE 168
           K +E   TL   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++
Sbjct: 134 KQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQ 193

Query: 169 SMRICIPSEDCELFRGGEQLQNLKTL 194
             +  IP +   L   G+QL++ +TL
Sbjct: 194 D-KEGIPPDQQRLIFAGKQLEDGRTL 218



 Score = 83.6 bits (205), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 54/151 (35%), Positives = 86/151 (56%), Gaps = 10/151 (6%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TL+ Y+
Sbjct: 6   QIFVKTLTGKTITLEVESSDTIDNVKTKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYN 64

Query: 199 IKENEVLQIIRHVKHSI--------FVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAP 250
           I++   L ++  ++            VK L G+ I LEV   DT+ +VK K+  + G  P
Sbjct: 65  IQKESTLHLVLRLRGETTTNTISQPVVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPP 124

Query: 251 DSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           D QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 125 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 155


>gi|116783396|gb|ABK22925.1| unknown [Picea sitchensis]
          Length = 262

 Score =  113 bits (282), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 85/227 (37%), Positives = 127/227 (55%), Gaps = 9/227 (3%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SD I+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQVFVKTLTG-KTISLEVESSDIIDNLKADIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++     +P +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGILPDQQSL 119

Query: 181 LFRGGEQLQNLKTLAYYDI-KENEVL--QIIRHVKHS---IFVKLLNGRYIILEVAKFDT 234
           +F  G+QL++ + LA Y+I KE+ +L    IR    S   IFV  L G  I L VA  DT
Sbjct: 120 IF-AGKQLEDGRNLADYNIQKESTILGTSFIRVRLTSDMLIFVITLTGEAITLVVATSDT 178

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + DVK K+  + G  P  QRL+F  +QLED RNLA Y I   S +++
Sbjct: 179 IYDVKAKIQGKKGIPPFRQRLIFAGKQLEDRRNLAYYNIQKWSTLHV 225



 Score = 87.0 bits (214), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 72/215 (33%), Positives = 112/215 (52%), Gaps = 12/215 (5%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ LK  I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDIIDNLKADIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGI   +  + + GK +E    
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGILPDQQSLIFAGKQLEDGRN 131

Query: 118 LDVLNINNEDTLQMISVPK-ELQE---IFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRI 172
           L   NI  E T+   S  +  L     IFV T T   + L V  + T+ DVK  ++  + 
Sbjct: 132 LADYNIQKESTILGTSFIRVRLTSDMLIFVITLTGEAITLVVATSDTIYDVKAKIQGKK- 190

Query: 173 CIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQI 207
            IP     L   G+QL++ + LAYY+I++   L +
Sbjct: 191 GIPPFRQRLIFAGKQLEDRRNLAYYNIQKWSTLHV 225


>gi|402586659|gb|EJW80596.1| polyubiquitin, partial [Wuchereria bancrofti]
          Length = 198

 Score =  112 bits (280), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 70/190 (36%), Positives = 110/190 (57%), Gaps = 4/190 (2%)

Query: 95  REGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLE 153
           +EGIP  +  + + GK +E   TL   NI  E TL ++   +   +IFV+T T  T+ LE
Sbjct: 2   KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 61

Query: 154 VRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKH 213
           V  + T+ +VK  ++  +  IP +   L   G+QL++ +TL+ Y+I++   L ++  ++ 
Sbjct: 62  VEASDTIENVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRG 120

Query: 214 S--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASY 271
              IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+F  +QLED R L+ Y
Sbjct: 121 GMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 180

Query: 272 KIVNESIVNL 281
            I  ES ++L
Sbjct: 181 NIQKESTLHL 190



 Score =  103 bits (256), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 68/192 (35%), Positives = 109/192 (56%), Gaps = 6/192 (3%)

Query: 21  EEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---NDSGVMKLYFKTPSNEKTFEL 77
           +E I  D   L +AG+QLE+G T+ DY I   S +H      G M+++ KT +  KT  L
Sbjct: 2   KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG-KTITL 60

Query: 78  KANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMISVPKE 137
           +   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   NI  E TL ++   + 
Sbjct: 61  EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRG 120

Query: 138 LQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAY 196
             +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TL+ 
Sbjct: 121 GMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSD 179

Query: 197 YDIKENEVLQII 208
           Y+I++   L ++
Sbjct: 180 YNIQKESTLHLV 191


>gi|307110244|gb|EFN58480.1| hypothetical protein CHLNCDRAFT_48528 [Chlorella variabilis]
          Length = 229

 Score =  112 bits (280), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 72/223 (32%), Positives = 128/223 (57%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSIFVKL--LNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++  + +K+  L G+ I +++   DTV+ +
Sbjct: 119 LVFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMMIKVKTLTGKEIEIDIEPTDTVQRI 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K+++  + G  P  QRL+F  + + DD+    Y I   S+++L
Sbjct: 179 KERVEEKEGIPPVQQRLIFAGKAMNDDKMAKDYNIEGGSVLHL 221



 Score = 89.4 bits (220), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 69/212 (32%), Positives = 112/212 (52%), Gaps = 8/212 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIENVKAKIQDKEGIPPDQQRLVFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTST-VKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +    I V+T T   +++++    TV  +K+ VE  +  IP 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMMIKVKTLTGKEIEIDIEPTDTVQRIKERVEE-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQII 208
               L   G+ + + K    Y+I+   VL ++
Sbjct: 191 VQQRLIFAGKAMNDDKMAKDYNIEGGSVLHLV 222


>gi|148908993|gb|ABR17600.1| unknown [Picea sitchensis]
          Length = 252

 Score =  112 bits (279), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 85/227 (37%), Positives = 127/227 (55%), Gaps = 9/227 (3%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SD I+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQVFVKTLTG-KTISLEVESSDIIDNLKADIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++     +P +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGILPDQQSL 119

Query: 181 LFRGGEQLQNLKTLAYYDI-KENEVL--QIIRHVKHS---IFVKLLNGRYIILEVAKFDT 234
           +F  G+QL++ + LA Y+I KE+ +L    IR    S   IFV  L G  I L VA  DT
Sbjct: 120 IF-AGKQLEDGRNLADYNIQKESTILGTSFIRVRLTSDMLIFVITLTGEAITLVVATSDT 178

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + DVK K+  + G  P  QRL+F  +QLED RNLA Y I   S +++
Sbjct: 179 IYDVKAKIQGKKGIPPFRQRLIFAGKQLEDRRNLAYYNIQKWSTLHV 225



 Score = 87.4 bits (215), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 72/216 (33%), Positives = 113/216 (52%), Gaps = 12/216 (5%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ LK  I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDIIDNLKADIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGI   +  + + GK +E    
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGILPDQQSLIFAGKQLEDGRN 131

Query: 118 LDVLNINNEDTLQMISVPK-ELQE---IFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRI 172
           L   NI  E T+   S  +  L     IFV T T   + L V  + T+ DVK  ++  + 
Sbjct: 132 LADYNIQKESTILGTSFIRVRLTSDMLIFVITLTGEAITLVVATSDTIYDVKAKIQGKK- 190

Query: 173 CIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQII 208
            IP     L   G+QL++ + LAYY+I++   L ++
Sbjct: 191 GIPPFRQRLIFAGKQLEDRRNLAYYNIQKWSTLHVV 226


>gi|339232974|ref|XP_003381604.1| ubiquitin family protein [Trichinella spiralis]
 gi|316979565|gb|EFV62342.1| ubiquitin family protein [Trichinella spiralis]
          Length = 210

 Score =  112 bits (279), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 73/199 (36%), Positives = 116/199 (58%), Gaps = 5/199 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKGKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKGKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPDSQRLVF 257
           K K+  + G  PD QRL+F
Sbjct: 179 KGKIQDKEGIPPDQQRLIF 197



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/188 (35%), Positives = 103/188 (54%), Gaps = 7/188 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKGKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKGKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++      P 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKGKIQDKEGIPPD 191

Query: 177 EDCELFRG 184
           +   +F G
Sbjct: 192 QQRLIFAG 199



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 56/145 (38%), Positives = 88/145 (60%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TL+ Y+
Sbjct: 2   QIFVKTLTGKTITLEVEPSDTIENVKGKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKGKIQDKEGIPPDQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F  +QLED R L+ Y I  ES ++L
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHL 145



 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 45/118 (38%), Positives = 68/118 (57%), Gaps = 8/118 (6%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEPSDTIENVKGKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESY 115
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + G  IE Y
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKGKIQDKEGIPPDQQRLIFAG--IELY 203


>gi|429327043|gb|AFZ78850.1| polyubiquitin [Coptotermes formosanus]
          Length = 230

 Score =  111 bits (278), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 75/223 (33%), Positives = 122/223 (54%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  K   L+   +D IE++K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KHITLEVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGKQLEDGNTLQDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTST-VKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           +I  + TL ++   +   +IFV+T T   + LEV     + DVK  ++  +  IP +   
Sbjct: 60  SIQKDSTLHLVLRLRGGMQIFVKTLTGKHITLEVEPTDRIEDVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++  TL  Y I+++  L ++  ++    IFVK L G++I LEV   D + DV
Sbjct: 119 LIFAGKQLEDGNTLQDYSIQKDSTLHLVLRLRGGMQIFVKTLTGKHITLEVEPTDRIEDV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED   L  Y I  +S ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGNTLQDYSIQKDSTLHL 221



 Score = 94.0 bits (232), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 68/212 (32%), Positives = 116/212 (54%), Gaps = 8/212 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ T++IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I  +S +H    
Sbjct: 15  LEVEPTDRIEDVKAKIQDK--EGIPPDQQRLIFAGKQLEDGNTLQDYSIQKDSTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  K   L+   +D IE++K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KHITLEVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGKQLEDGNT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTST-VKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   +I  + TL ++   +   +IFV+T T   + LEV     + DVK  ++  +  IP 
Sbjct: 132 LQDYSIQKDSTLHLVLRLRGGMQIFVKTLTGKHITLEVEPTDRIEDVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQII 208
           +   L   G+QL++  TL  Y I+++  L ++
Sbjct: 191 DQQRLIFAGKQLEDGNTLQDYSIQKDSTLHLV 222


>gi|123445177|ref|XP_001311351.1| polyubiquitin [Trichomonas vaginalis G3]
 gi|121893157|gb|EAX98421.1| polyubiquitin, putative [Trichomonas vaginalis G3]
          Length = 229

 Score =  111 bits (278), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 75/223 (33%), Positives = 122/223 (54%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  K   L+   +D IE++K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KHITLEVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGKQLEDGNTLQDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTST-VKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           +I  + TL ++   +   +IFV+T T   + LEV     + DVK  ++  +  IP +   
Sbjct: 60  SIQKDSTLHLVLRLRGGMQIFVKTLTGKHITLEVEPTDRIEDVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++  TL  Y I+++  L ++  ++    IFVK L G++I LEV   D + DV
Sbjct: 119 LIFAGKQLEDGNTLQDYSIQKDSTLHLVLRLRGGMQIFVKTLTGKHITLEVEPTDRIEDV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED   L  Y I  +S ++L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGNTLQDYSIQKDSTLHL 221



 Score = 94.0 bits (232), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 68/212 (32%), Positives = 116/212 (54%), Gaps = 8/212 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ T++IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I  +S +H    
Sbjct: 15  LEVEPTDRIEDVKAKIQDK--EGIPPDQQRLIFAGKQLEDGNTLQDYSIQKDSTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  K   L+   +D IE++K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KHITLEVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGKQLEDGNT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTST-VKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   +I  + TL ++   +   +IFV+T T   + LEV     + DVK  ++  +  IP 
Sbjct: 132 LQDYSIQKDSTLHLVLRLRGGMQIFVKTLTGKHITLEVEPTDRIEDVKAKIQD-KEGIPP 190

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQII 208
           +   L   G+QL++  TL  Y I+++  L ++
Sbjct: 191 DQQRLIFAGKQLEDGNTLQDYSIQKDSTLHLV 222


>gi|224284138|gb|ACN39806.1| unknown [Picea sitchensis]
          Length = 252

 Score =  111 bits (278), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 85/227 (37%), Positives = 126/227 (55%), Gaps = 9/227 (3%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SD I+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQVFVKTLTG-KTISLEVESSDIIDNLKADIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++     +P +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGILPDQQSL 119

Query: 181 LFRGGEQLQNLKTLAYYDI-KENEVL--QIIRHVKHS---IFVKLLNGRYIILEVAKFDT 234
           +F  G+QL + + LA Y+I KE+ +L    IR    S   IFV  L G  I L VA  DT
Sbjct: 120 IF-AGKQLGDGRNLADYNIQKESTILGTSFIRVRLTSDMLIFVITLTGEAITLVVATSDT 178

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + DVK K+  + G  P  QRL+F  +QLED RNLA Y I   S +++
Sbjct: 179 IYDVKAKIQGKKGIPPFRQRLIFAGKQLEDRRNLAYYNIQKWSTLHV 225



 Score = 85.1 bits (209), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 71/216 (32%), Positives = 112/216 (51%), Gaps = 12/216 (5%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ LK  I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDIIDNLKADIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGI   +  + + GK +     
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGILPDQQSLIFAGKQLGDGRN 131

Query: 118 LDVLNINNEDTLQMISVPK-ELQE---IFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRI 172
           L   NI  E T+   S  +  L     IFV T T   + L V  + T+ DVK  ++  + 
Sbjct: 132 LADYNIQKESTILGTSFIRVRLTSDMLIFVITLTGEAITLVVATSDTIYDVKAKIQGKK- 190

Query: 173 CIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQII 208
            IP     L   G+QL++ + LAYY+I++   L ++
Sbjct: 191 GIPPFRQRLIFAGKQLEDRRNLAYYNIQKWSTLHVV 226


>gi|357474747|ref|XP_003607659.1| Ubiquitin [Medicago truncatula]
 gi|355508714|gb|AES89856.1| Ubiquitin [Medicago truncatula]
          Length = 259

 Score =  111 bits (277), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 76/223 (34%), Positives = 124/223 (55%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E    L   
Sbjct: 29  MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRILADY 87

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 88  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 146

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL  Y+I++   L ++  ++    IFV  L G+ I L+V   DT+ DV
Sbjct: 147 LIFAGKQLEDGRTLGDYNIQKESTLHLVLRLRGGMQIFVNTLTGKTITLDVESSDTIADV 206

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K  L  ++G   D  R+V   +QL+D   LA Y I  ES +++
Sbjct: 207 KLTLEEKVGIPLDQVRVVIAGKQLKDSYTLAHYNIQKESTLHM 249



 Score =  108 bits (269), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 73/215 (33%), Positives = 121/215 (56%), Gaps = 8/215 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G  + DY I   S +H    
Sbjct: 43  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRILADYNIQKESTLHLVLR 100

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 101 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 159

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV T T  T+ L+V  + T+ DVK  +E  ++ IP 
Sbjct: 160 LGDYNIQKESTLHLVLRLRGGMQIFVNTLTGKTITLDVESSDTIADVKLTLEE-KVGIPL 218

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHV 211
           +   +   G+QL++  TLA+Y+I++   L ++  V
Sbjct: 219 DQVRVVIAGKQLKDSYTLAHYNIQKESTLHMVLQV 253



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 57/148 (38%), Positives = 87/148 (58%), Gaps = 4/148 (2%)

Query: 137 ELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLA 195
           E  +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ + LA
Sbjct: 27  EQMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRILA 85

Query: 196 YYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQ 253
            Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD Q
Sbjct: 86  DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQ 145

Query: 254 RLVFKRQQLEDDRNLASYKIVNESIVNL 281
           RL+F  +QLED R L  Y I  ES ++L
Sbjct: 146 RLIFAGKQLEDGRTLGDYNIQKESTLHL 173


>gi|90076064|dbj|BAE87712.1| unnamed protein product [Macaca fascicularis]
          Length = 210

 Score =  111 bits (277), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 73/204 (35%), Positives = 118/204 (57%), Gaps = 6/204 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+A  SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEAEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS---IFVKLLNGRYIILEVAKFDTVRD 237
           L   G+QL++ +TL+ Y+I++   L ++  ++      +VK L G+ I LEV   DT+ +
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGDAVSYVKTLTGKTITLEVEPSDTIEN 178

Query: 238 VKDKLFREIGQAPDSQRLVFKRQQ 261
           VK K+  + G  PD QRL+F  +Q
Sbjct: 179 VKAKIQDKEGIPPDQQRLIFAGKQ 202



 Score = 90.5 bits (223), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 55/145 (37%), Positives = 87/145 (60%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LE   + T+ +VK  ++  +  IP +   L   G+QL++ +TL+ Y+
Sbjct: 2   QIFVKTLTGKTITLEAEPSDTIENVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F  +QLED R L+ Y I  ES ++L
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHL 145



 Score = 85.1 bits (209), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 63/189 (33%), Positives = 101/189 (53%), Gaps = 8/189 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++ + ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEAEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEI-FVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIP 175
           L   NI  E TL ++   +    + +V+T T  T+ LEV  + T+ +VK  ++      P
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGDAVSYVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP 191

Query: 176 SEDCELFRG 184
            +   +F G
Sbjct: 192 DQQRLIFAG 200


>gi|217074596|gb|ACJ85658.1| unknown [Medicago truncatula]
          Length = 228

 Score =  110 bits (276), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 74/204 (36%), Positives = 117/204 (57%), Gaps = 5/204 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTIILEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LVFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKALTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQL 262
           K K+  + G  PD QRL+F    L
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGNNL 202



 Score = 94.4 bits (233), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 59/145 (40%), Positives = 88/145 (60%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TLA Y+
Sbjct: 2   QIFVKTLTGKTIILEVESSDTIDNVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRLV
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLV 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F  +QLED R LA Y I  ES ++L
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHL 145



 Score = 90.9 bits (224), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 63/188 (33%), Positives = 102/188 (54%), Gaps = 7/188 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLVFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+  T  T+ LEV  + T+ +VK  ++      P 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKALTGKTITLEVESSDTIDNVKAKIQDKEGIPPD 191

Query: 177 EDCELFRG 184
           +   +F G
Sbjct: 192 QQRLIFAG 199


>gi|403352030|gb|EJY75518.1| Polyubiquitin-C [Oxytricha trifallax]
          Length = 385

 Score =  110 bits (276), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 87/285 (30%), Positives = 152/285 (53%), Gaps = 10/285 (3%)

Query: 3   VKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---NDS 59
           V +++ I  +K +I  KV    L D   L + G+ L+N  T+ DY I N S ++   N  
Sbjct: 17  VDESDTIAMVKQKIQEKVV--TLPDPLWLAFGGKFLDNKKTIKDYNIGNQSTLYQVLNLK 74

Query: 60  GVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLD 119
           G ++++ +T +  KT  ++    DTIE I+  I+ + G+P     + +GGK ++    L 
Sbjct: 75  GGVQIFVRTLTG-KTITIEVELDDTIECIRAKIQDKPGMPPDHIRLVFGGKKLQDGKILS 133

Query: 120 VLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSED 178
              +  E T+ M+   +   +IFV+  T  T+ LEV +  ++  ++  ++  +  IP + 
Sbjct: 134 DYGLQKESTIHMVLRLRGGMQIFVKALTGRTITLEVEQDESIESIRAKLQD-KEGIPPDQ 192

Query: 179 CELFRGGEQLQNLKTLAYYDI-KENEVLQIIR-HVKHSIFVKLLNGRYIILEVAKFDTVR 236
             L  GG++L   KTL  Y I KE+ +  ++R     +I+VK L+G+   LEV + D++ 
Sbjct: 193 LRLIFGGKELLVGKTLKDYGIQKESTIFTVLRLRGGMNIYVKTLSGKTKTLEVEESDSIE 252

Query: 237 DVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
            +++K+  +    PD  RLVF  + LED R L+ Y I NES ++L
Sbjct: 253 IIREKILDKGWVPPDQVRLVFNGKLLEDGRYLSDYNIQNESTLHL 297



 Score = 86.7 bits (213), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 68/269 (25%), Positives = 139/269 (51%), Gaps = 10/269 (3%)

Query: 16  IHAKVEEE--ILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---NDSGVMKLYFKTPS 70
           I AK++++  +  D   L + G++L++G  + DYG+   S IH      G M+++ K  +
Sbjct: 102 IRAKIQDKPGMPPDHIRLVFGGKKLQDGKILSDYGLQKESTIHMVLRLRGGMQIFVKALT 161

Query: 71  NEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQ 130
             +T  L+  + ++IE+I+  ++ +EGIP  +  + +GGK +    TL    I  E T+ 
Sbjct: 162 G-RTITLEVEQDESIESIRAKLQDKEGIPPDQLRLIFGGKELLVGKTLKDYGIQKESTIF 220

Query: 131 MISVPKELQEIFVQTPTSTVK-LEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQ 189
            +   +    I+V+T +   K LEV  + ++  +++ +   +  +P +   L   G+ L+
Sbjct: 221 TVLRLRGGMNIYVKTLSGKTKTLEVEESDSIEIIREKILD-KGWVPPDQVRLVFNGKLLE 279

Query: 190 NLKTLAYYDIKENEVLQIIRHVK--HSIFVKLLNGRYIILEVAKFDTVRDVKDKLFREIG 247
           + + L+ Y+I+    L ++  ++    I  K L G+ + L V + + + ++K  +  + G
Sbjct: 280 DGRYLSDYNIQNESTLHLVLKLRIGMQIHAKTLGGKTLTLPVDENEPIENIKAMIQNKEG 339

Query: 248 QAPDSQRLVFKRQQLEDDRNLASYKIVNE 276
              D  RL+   +QLED + L+ Y I N+
Sbjct: 340 IPADQLRLIIGAKQLEDGKTLSDYNIQND 368



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 64/221 (28%), Positives = 117/221 (52%), Gaps = 5/221 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ K   N KT+ +  + SDTI  +K  I+ +         + +GGK +++  T+   
Sbjct: 1   MQIFVKI-VNGKTYAIDVDESDTIAMVKQKIQEKVVTLPDPLWLAFGGKFLDNKKTIKDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI N+ TL  +   K   +IFV+T T  T+ +EV    T+  ++  ++  +  +P +   
Sbjct: 60  NIGNQSTLYQVLNLKGGVQIFVRTLTGKTITIEVELDDTIECIRAKIQD-KPGMPPDHIR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L  GG++LQ+ K L+ Y +++   + ++  ++    IFVK L GR I LEV + +++  +
Sbjct: 119 LVFGGKKLQDGKILSDYGLQKESTIHMVLRLRGGMQIFVKALTGRTITLEVEQDESIESI 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIV 279
           + KL  + G  PD  RL+F  ++L   + L  Y I  ES +
Sbjct: 179 RAKLQDKEGIPPDQLRLIFGGKELLVGKTLKDYGIQKESTI 219



 Score = 77.4 bits (189), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 66/216 (30%), Positives = 113/216 (52%), Gaps = 8/216 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIHND-- 58
           ++V++ E IE ++ ++  K  E I  D   L + G++L  G T+ DYGI   S I     
Sbjct: 167 LEVEQDESIESIRAKLQDK--EGIPPDQLRLIFGGKELLVGKTLKDYGIQKESTIFTVLR 224

Query: 59  -SGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M +Y KT S  KT  L+   SD+IE I+  I  +  +P  +  + + GKL+E    
Sbjct: 225 LRGGMNIYVKTLSG-KTKTLEVEESDSIEIIREKILDKGWVPPDQVRLVFNGKLLEDGRY 283

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQT-PTSTVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI NE TL ++   +   +I  +T    T+ L V     + ++K M+++ +  IP+
Sbjct: 284 LSDYNIQNESTLHLVLKLRIGMQIHAKTLGGKTLTLPVDENEPIENIKAMIQN-KEGIPA 342

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L  G +QL++ KTL+ Y+I+ +  + I+  +K
Sbjct: 343 DQLRLIIGAKQLEDGKTLSDYNIQNDYAILIVLKLK 378


>gi|400599610|gb|EJP67307.1| Ubiquitin subgroup [Beauveria bassiana ARSEF 2860]
          Length = 212

 Score =  109 bits (273), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 74/221 (33%), Positives = 121/221 (54%), Gaps = 18/221 (8%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSIFVKLLNGRYIILEVAKFDTVRDVKD 240
           L   G+QL++ +TL+ Y+I++   L ++  ++                V   DT+ +VK 
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRG---------------VESSDTIDNVKS 163

Query: 241 KLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 164 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 204



 Score = 87.8 bits (216), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 65/212 (30%), Positives = 112/212 (52%), Gaps = 25/212 (11%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTSTVKLE-VRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++                 ++L  V  + T+ +VK  ++  +  IP 
Sbjct: 132 LSDYNIQKESTLHLV-----------------LRLRGVESSDTIDNVKSKIQD-KEGIPP 173

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQII 208
           +   L   G+QL++ +TL+ Y+I++   L ++
Sbjct: 174 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 205


>gi|340382024|ref|XP_003389521.1| PREDICTED: polyubiquitin-like, partial [Amphimedon queenslandica]
          Length = 921

 Score =  109 bits (272), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 86/257 (33%), Positives = 141/257 (54%), Gaps = 15/257 (5%)

Query: 36  QQLENGLTVIDYGIPNNSVI-------HNDSGVMKLYFKTPSNEKTFELKANRSDTIENI 88
           + L++G T+  YGI     I       H  S  M ++ KT +  KT  L+  R+D+IEN+
Sbjct: 61  KTLKDGHTLSYYGIQKEGTIIHLVLPLHRSS--MIIFLKTLTG-KTITLEVERTDSIENV 117

Query: 89  KFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEIFV-QTPT 147
           K  I+ +EGIP ++  + + G+ +E   TL    I  E TL ++   +   +IFV QT T
Sbjct: 118 KIKIQEKEGIPPNQQRLVFDGRQLEDGPTLSDYRIQKESTLLLLLCVQGGMQIFVKQTLT 177

Query: 148 STV-KLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQ 206
           + +  LEV  + T+  VK  ++   +  P +  EL    +QL++  TL+ Y +++  +L+
Sbjct: 178 NKIFTLEVEPSDTIKTVKAKIQK-ELGDPPDYQELKLDDKQLEDGHTLSDYKVQKESMLE 236

Query: 207 I--IRHVKHSIFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLED 264
           +  +  V   IFVK    + I LEV + DT+ +VK K+  E G  PD Q+L+F  ++LED
Sbjct: 237 LSPLLEVSMKIFVKAFTFKTITLEVNRSDTIENVKAKILHEKGIQPDQQKLIFNGKRLED 296

Query: 265 DRNLASYKIVNESIVNL 281
              L++Y I NE+ +NL
Sbjct: 297 GCKLSNYFIQNEATLNL 313



 Score =  102 bits (253), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 90/297 (30%), Positives = 152/297 (51%), Gaps = 21/297 (7%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V  T+ I  LK  I  K  E+I  D   LFYAG+QL++  T+ +Y IP  S++    +
Sbjct: 486 IEVLPTDTISNLKKMIRDK--EKISPDNQTLFYAGRQLDDASTLANYDIPMESILQLVTS 543

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
            +  MK+  K  S EK  EL  N SDTI +IK  IE  +GIP +   I +  K +E    
Sbjct: 544 FNPTMKVSVKLLSGEK-MELNVNFSDTISDIKAKIEEIQGIPCNRQKIMFAKKRLEDDYV 602

Query: 118 LDVL-----------NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKK 165
             VL           NI +  T+ +I +   +  IF++ P+  T+  EV  + T+  +K 
Sbjct: 603 EKVLSPNKIKTLIDHNITDGSTMHLIFLRGGMT-IFIKLPSGRTISFEVDPSDTIKTIKY 661

Query: 166 MVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQII-RHVKHSIFVKLLNGRY 224
            ++      P++   +F   ++L++  TL+ Y+I++ + + ++   +   IFVK + G  
Sbjct: 662 KIQDKEKLSPNQQRLIF-AFKRLEDHYTLSDYNIQKEDTMHLLDSSLPMQIFVKAIIGET 720

Query: 225 IILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
             L+V    T+  VK  +  E G  P  Q+L+F  ++LED   L+ Y I N++ ++L
Sbjct: 721 FALQVDSCCTIETVKYMILYEKGIPPYLQKLLFASKRLEDCHTLSYYNIKNQNTLDL 777



 Score = 91.3 bits (225), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 83/303 (27%), Positives = 153/303 (50%), Gaps = 21/303 (6%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYA-GQQLENGLTVIDYGIPNNSVI---H 56
           +KV   + IE +K +I  K  E I  D  +LF     QL+N LT++ Y I +N+ +   H
Sbjct: 409 LKVDPNDTIENVKSQIRDK--ESIELDQQKLFTRYCNQLDNSLTLLHYNIGHNATLYLSH 466

Query: 57  NDSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYI 116
              G   +Y +T +  K   ++   +DTI N+K +I  +E I      ++Y G+ ++   
Sbjct: 467 YPRGGANIYIRTFTG-KMIVIEVLPTDTISNLKKMIRDKEKISPDNQTLFYAGRQLDDAS 525

Query: 117 TLDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIP 175
           TL   +I  E  LQ+++      ++ V+  +   ++L V  + T+ D+K  +E ++  IP
Sbjct: 526 TLANYDIPMESILQLVTSFNPTMKVSVKLLSGEKMELNVNFSDTISDIKAKIEEIQ-GIP 584

Query: 176 SEDCELFRGGEQLQN-----------LKTLAYYDIKENEVLQII-RHVKHSIFVKLLNGR 223
               ++    ++L++           +KTL  ++I +   + +I      +IF+KL +GR
Sbjct: 585 CNRQKIMFAKKRLEDDYVEKVLSPNKIKTLIDHNITDGSTMHLIFLRGGMTIFIKLPSGR 644

Query: 224 YIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNLTD 283
            I  EV   DT++ +K K+  +   +P+ QRL+F  ++LED   L+ Y I  E  ++L D
Sbjct: 645 TISFEVDPSDTIKTIKYKIQDKEKLSPNQQRLIFAFKRLEDHYTLSDYNIQKEDTMHLLD 704

Query: 284 LGM 286
             +
Sbjct: 705 SSL 707



 Score = 90.9 bits (224), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 83/276 (30%), Positives = 143/276 (51%), Gaps = 13/276 (4%)

Query: 16  IHAKVEEEILE--DLPELFYAGQQLENGLTVIDYGIPNNSVIHNDSGV---MKLYFKTPS 70
           + AK+++E+ +  D  EL    +QLE+G T+ DY +   S++     +   MK++ K  +
Sbjct: 194 VKAKIQKELGDPPDYQELKLDDKQLEDGHTLSDYKVQKESMLELSPLLEVSMKIFVKAFT 253

Query: 71  NEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQ 130
             KT  L+ NRSDTIEN+K  I   +GI   +  + + GK +E    L    I NE TL 
Sbjct: 254 F-KTITLEVNRSDTIENVKAKILHEKGIQPDQQKLIFNGKRLEDGCKLSNYFIQNEATLN 312

Query: 131 MISVPKELQ-EIFVQTPTSTVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQ 189
           ++ +P+++   I V        + +     +  +K ++E+ +  IP  +  L   G+QL 
Sbjct: 313 LL-LPEDISINIKVVNGQVLTSVYISPDLNIESLKTIIET-KTSIPCSEQNLILAGKQLS 370

Query: 190 NLKTLAYYDIKENEVLQII-RHVKHSIFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQ 248
             +T +YY+I E + L ++ RH   +IFVK   G+ I L+V   DT+ +VK ++  +   
Sbjct: 371 FGRTFSYYNITEGDTLHLVQRHADCTIFVKTETGQMIALKVDPNDTIENVKSQIRDKESI 430

Query: 249 APDSQRLVFKR--QQLEDDRNLASYKIVNESIVNLT 282
             D Q+L F R   QL++   L  Y I + + + L+
Sbjct: 431 ELDQQKL-FTRYCNQLDNSLTLLHYNIGHNATLYLS 465



 Score = 78.2 bits (191), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 73/224 (32%), Positives = 115/224 (51%), Gaps = 15/224 (6%)

Query: 75  FELKANRSDTIENI-KFIIEVREGIP------VHEYDIYYGG-KLIESYITLDVLNINNE 126
           F ++   SDTIE + K I + +E  P      +  + IY G  K ++   TL    I  E
Sbjct: 18  FSVEVEASDTIEGVRKKIYKEKEYNPRYYPSQLSLFKIYDGKFKTLKDGHTLSYYGIQKE 77

Query: 127 DTLQMISVP--KELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFR 183
            T+  + +P  +    IF++T T  T+ LEV R  ++ +VK  ++  +  IP     L  
Sbjct: 78  GTIIHLVLPLHRSSMIIFLKTLTGKTITLEVERTDSIENVKIKIQE-KEGIPPNQQRLVF 136

Query: 184 GGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVK-LLNGRYIILEVAKFDTVRDVKD 240
            G QL++  TL+ Y I++   L ++  V+    IFVK  L  +   LEV   DT++ VK 
Sbjct: 137 DGRQLEDGPTLSDYRIQKESTLLLLLCVQGGMQIFVKQTLTNKIFTLEVEPSDTIKTVKA 196

Query: 241 KLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNLTDL 284
           K+ +E+G  PD Q L    +QLED   L+ YK+  ES++ L+ L
Sbjct: 197 KIQKELGDPPDYQELKLDDKQLEDGHTLSDYKVQKESMLELSPL 240



 Score = 73.6 bits (179), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 78/293 (26%), Positives = 140/293 (47%), Gaps = 22/293 (7%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNS---VIHN 57
           ++V++T+ IE +K++I  K  E I  +   L + G+QLE+G T+ DY I   S   ++  
Sbjct: 106 LEVERTDSIENVKIKIQEK--EGIPPNQQRLVFDGRQLEDGPTLSDYRIQKESTLLLLLC 163

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ K     K F L+   SDTI+ +K  I+   G P    ++    K +E   T
Sbjct: 164 VQGGMQIFVKQTLTNKIFTLEVEPSDTIKTVKAKIQKELGDPPDYQELKLDDKQLEDGHT 223

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPT-STVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L    +  E  L++  + +   +IFV+  T  T+ LEV R+ T+ +VK  +   +   P 
Sbjct: 224 LSDYKVQKESMLELSPLLEVSMKIFVKAFTFKTITLEVNRSDTIENVKAKILHEKGIQPD 283

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSIFVKLLNGRYII-------LEV 229
           +   +F  G++L++   L+ Y I+    L ++     SI +K++NG+ +        L +
Sbjct: 284 QQKLIF-NGKRLEDGCKLSNYFIQNEATLNLLLPEDISINIKVVNGQVLTSVYISPDLNI 342

Query: 230 AKFDTVRDVKDKLFREIGQAPDS-QRLVFKRQQLEDDRNLASYKIVNESIVNL 281
               T+ + K  +       P S Q L+   +QL   R  + Y I     ++L
Sbjct: 343 ESLKTIIETKTSI-------PCSEQNLILAGKQLSFGRTFSYYNITEGDTLHL 388



 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 73/137 (53%), Gaps = 5/137 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH--ND 58
            +V  ++ I+ +K +I  K  E++  +   L +A ++LE+  T+ DY I     +H  + 
Sbjct: 648 FEVDPSDTIKTIKYKIQDK--EKLSPNQQRLIFAFKRLEDHYTLSDYNIQKEDTMHLLDS 705

Query: 59  SGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITL 118
           S  M+++ K    E TF L+ +   TIE +K++I   +GIP +   + +  K +E   TL
Sbjct: 706 SLPMQIFVKAIIGE-TFALQVDSCCTIETVKYMILYEKGIPPYLQKLLFASKRLEDCHTL 764

Query: 119 DVLNINNEDTLQMISVP 135
              NI N++TL +  +P
Sbjct: 765 SYYNIKNQNTLDLQFIP 781


>gi|182407850|gb|ACB87916.1| polyubiquitin 1 [Malus x domestica]
          Length = 208

 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 69/199 (34%), Positives = 116/199 (58%), Gaps = 5/199 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  ++ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGESITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ ++LA Y+I++   L ++  ++    IFVK L G+ I LEV   +T+ +V
Sbjct: 119 LIFAGKQLEDGRSLADYNIQKESTLHLVLRLRGGMHIFVKSLTGKTITLEVESSETIDNV 178

Query: 239 KDKLFREIGQAPDSQRLVF 257
           + K+  + G  PD QRL+F
Sbjct: 179 QAKIQDKEGIPPDQQRLIF 197



 Score = 94.0 bits (232), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 58/145 (40%), Positives = 88/145 (60%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TLA Y+
Sbjct: 2   QIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    IFVK L G  I LEV   DT+ +VK K+  + G  PD QRL+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGESITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F  +QLED R+LA Y I  ES ++L
Sbjct: 121 FAGKQLEDGRSLADYNIQKESTLHL 145



 Score = 87.4 bits (215), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 60/188 (31%), Positives = 102/188 (54%), Gaps = 7/188 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT + E +  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   +
Sbjct: 73  LRGGMQIFVKTLTGE-SITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRS 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +    IFV++ T  T+ LEV  + T+ +V+  ++      P 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMHIFVKSLTGKTITLEVESSETIDNVQAKIQDKEGIPPD 191

Query: 177 EDCELFRG 184
           +   +F G
Sbjct: 192 QQRLIFAG 199


>gi|82512|pir||PS0380 ubiquitin precursor - rice (fragment)
 gi|218189|dbj|BAA02241.1| poly-ubiquitin [Oryza sativa Japonica Group]
          Length = 189

 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 68/180 (37%), Positives = 104/180 (57%), Gaps = 4/180 (2%)

Query: 105 IYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDV 163
           + + GK +E   TL   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +V
Sbjct: 3   LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 62

Query: 164 KKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLN 221
           K  ++  +  IP +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L 
Sbjct: 63  KAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLT 121

Query: 222 GRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           G+ I LEV   DT+ +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 122 GKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 181



 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 65/189 (34%), Positives = 108/189 (57%), Gaps = 6/189 (3%)

Query: 31  LFYAGQQLENGLTVIDYGIPNNSVIH---NDSGVMKLYFKTPSNEKTFELKANRSDTIEN 87
           L +AG+QLE+G T+ DY I   S +H      G M+++ KT +  KT  L+   SDTI+N
Sbjct: 3   LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG-KTITLEVESSDTIDN 61

Query: 88  IKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEIFVQTPT 147
           +K  I+ +EGIP  +  + + GK +E   TL   NI  E TL ++   +   +IFV+T T
Sbjct: 62  VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLT 121

Query: 148 S-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQ 206
             T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TLA Y+I++   L 
Sbjct: 122 GKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 180

Query: 207 IIRHVKHSI 215
           ++  ++  +
Sbjct: 181 LVLRLRGGL 189



 Score = 77.4 bits (189), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 49/135 (36%), Positives = 77/135 (57%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 51  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 108

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 109 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 167

Query: 118 LDVLNINNEDTLQMI 132
           L   NI  E TL ++
Sbjct: 168 LADYNIQKESTLHLV 182


>gi|254540256|gb|ACT66230.1| polyubiquitin protein [Piriformospora indica]
          Length = 196

 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 67/187 (35%), Positives = 108/187 (57%), Gaps = 4/187 (2%)

Query: 77  LKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMISVPK 136
           L+   SDT++N+K  I+ +EGIP  +  + + GK +E   TL   NI  E TL ++   +
Sbjct: 6   LEVESSDTMDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 65

Query: 137 ELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLA 195
              +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TL+
Sbjct: 66  GGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQD-KEGIPPDQQRLIFAGKQLEDGRTLS 124

Query: 196 YYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQ 253
            Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD Q
Sbjct: 125 DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQ 184

Query: 254 RLVFKRQ 260
           RL+F  Q
Sbjct: 185 RLIFAGQ 191



 Score = 92.0 bits (227), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 63/188 (33%), Positives = 103/188 (54%), Gaps = 7/188 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ ++ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 6   LEVESSDTMDNVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 63

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 64  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 122

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++      P 
Sbjct: 123 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPD 182

Query: 177 EDCELFRG 184
           +   +F G
Sbjct: 183 QQRLIFAG 190



 Score = 84.3 bits (207), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 50/134 (37%), Positives = 80/134 (59%), Gaps = 3/134 (2%)

Query: 150 VKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIR 209
           + LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TL+ Y+I++   L ++ 
Sbjct: 4   ITLEVESSDTMDNVKTKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 62

Query: 210 HVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRN 267
            ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+F  +QLED R 
Sbjct: 63  RLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 122

Query: 268 LASYKIVNESIVNL 281
           L+ Y I  ES ++L
Sbjct: 123 LSDYNIQKESTLHL 136



 Score = 65.5 bits (158), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 40/113 (35%), Positives = 66/113 (58%), Gaps = 6/113 (5%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 82  LEVESSDTIDNVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 139

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGK 110
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + G+
Sbjct: 140 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGQ 191



 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/60 (46%), Positives = 37/60 (61%)

Query: 222 GRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
            R I LEV   DT+ +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 1   ARGITLEVESSDTMDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 60


>gi|340374063|ref|XP_003385558.1| PREDICTED: polyubiquitin-C-like, partial [Amphimedon queenslandica]
          Length = 675

 Score =  105 bits (261), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 92/299 (30%), Positives = 147/299 (49%), Gaps = 23/299 (7%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
            +V  T+ +  LK  I  K  E I  +   LFYAGQQL++  T+ +Y IP  S++     
Sbjct: 114 FEVLPTDTVSYLKKMIRDK--EGISSNDQTLFYAGQQLDDASTLANYDIPMESMLQLVTR 171

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLI-ESYI 116
               M ++ KT S  KT +L  N SDT+ +IK  IE  EGIP HE  I +G +L+ E YI
Sbjct: 172 FCPNMTIFAKTLSG-KTIKLNVNFSDTVSDIKRKIEEMEGIPCHEQKIIFGQRLLGEDYI 230

Query: 117 ----------TLDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKK 165
                     TL   N+ +   L +I  P     + V+ P    + L+   + T+ +VK 
Sbjct: 231 EEALSPGKIKTLLDHNVKDGSILHLI-FPSRASGVIVKFPAGKIIMLDTEPSDTIENVKA 289

Query: 166 MVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRH---VKHSIFVKLLNG 222
            ++  +  IP +   L     +L++ +TL+ Y+I+  + + ++ H       +FVK   G
Sbjct: 290 KIKD-KEGIPPDQQRLIFAFRRLEDGRTLSDYNIQNKDTIHLLLHRFGTSMKVFVKAFTG 348

Query: 223 RYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
             I L+V    T+  VK  +  E G     Q L+F  +QL++   L+ Y I NE+ ++L
Sbjct: 349 NMITLQVEPSFTIESVKYMILDEEGVPLHLQELLFAGKQLDNGHQLSHYNIKNENTLDL 407



 Score =  103 bits (258), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 90/299 (30%), Positives = 156/299 (52%), Gaps = 23/299 (7%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYA-GQQLENGLTVIDYGIPNNSVI---H 56
           +KV   + IE +K +I AK  + I  D  +L     +QL+N LT+ DY I + +++   H
Sbjct: 37  LKVDPNDTIENIKSQIQAK--KMIPIDQQKLITRYRKQLDNSLTLSDYNIEDKAILYLTH 94

Query: 57  NDSGVMKLYFKTPSNEKT-FELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESY 115
                  +Y +T S +   FE+    +DT+  +K +I  +EGI  ++  ++Y G+ ++  
Sbjct: 95  YLRSGTDIYIRTFSGKMVVFEVLP--TDTVSYLKKMIRDKEGISSNDQTLFYAGQQLDDA 152

Query: 116 ITLDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICI 174
            TL   +I  E  LQ+++       IF +T +  T+KL V  + TV D+K+ +E M   I
Sbjct: 153 STLANYDIPMESMLQLVTRFCPNMTIFAKTLSGKTIKLNVNFSDTVSDIKRKIEEME-GI 211

Query: 175 PSEDCELFRGGEQLQ-----------NLKTLAYYDIKENEVLQIIRHVKHS-IFVKLLNG 222
           P  + ++  G   L             +KTL  +++K+  +L +I   + S + VK   G
Sbjct: 212 PCHEQKIIFGQRLLGEDYIEEALSPGKIKTLLDHNVKDGSILHLIFPSRASGVIVKFPAG 271

Query: 223 RYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + I+L+    DT+ +VK K+  + G  PD QRL+F  ++LED R L+ Y I N+  ++L
Sbjct: 272 KIIMLDTEPSDTIENVKAKIKDKEGIPPDQQRLIFAFRRLEDGRTLSDYNIQNKDTIHL 330



 Score = 80.1 bits (196), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 109/206 (52%), Gaps = 6/206 (2%)

Query: 64  LYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYD-IYYGGKLIESYITLDVLN 122
           ++ KT +   T  LK + +DTIENIK  I+ ++ IP+ +   I    K +++ +TL   N
Sbjct: 25  VFIKTATG-NTITLKVDPNDTIENIKSQIQAKKMIPIDQQKLITRYRKQLDNSLTLSDYN 83

Query: 123 INNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCEL 181
           I ++  L +    +   +I+++T +   V  EV    TV  +KKM+   +  I S D  L
Sbjct: 84  IEDKAILYLTHYLRSGTDIYIRTFSGKMVVFEVLPTDTVSYLKKMIRD-KEGISSNDQTL 142

Query: 182 FRGGEQLQNLKTLAYYDIKENEVLQIIRHV--KHSIFVKLLNGRYIILEVAKFDTVRDVK 239
           F  G+QL +  TLA YDI    +LQ++       +IF K L+G+ I L V   DTV D+K
Sbjct: 143 FYAGQQLDDASTLANYDIPMESMLQLVTRFCPNMTIFAKTLSGKTIKLNVNFSDTVSDIK 202

Query: 240 DKLFREIGQAPDSQRLVFKRQQLEDD 265
            K+    G     Q+++F ++ L +D
Sbjct: 203 RKIEEMEGIPCHEQKIIFGQRLLGED 228



 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/139 (31%), Positives = 75/139 (53%), Gaps = 7/139 (5%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---- 56
           +  + ++ IE +K +I  K +E I  D   L +A ++LE+G T+ DY I N   IH    
Sbjct: 276 LDTEPSDTIENVKAKI--KDKEGIPPDQQRLIFAFRRLEDGRTLSDYNIQNKDTIHLLLH 333

Query: 57  NDSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYI 116
                MK++ K  +      L+   S TIE++K++I   EG+P+H  ++ + GK +++  
Sbjct: 334 RFGTSMKVFVKAFTG-NMITLQVEPSFTIESVKYMILDEEGVPLHLQELLFAGKQLDNGH 392

Query: 117 TLDVLNINNEDTLQMISVP 135
            L   NI NE+TL +  +P
Sbjct: 393 QLSHYNIKNENTLDLQFIP 411



 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 30/93 (32%), Positives = 56/93 (60%), Gaps = 2/93 (2%)

Query: 192 KTLAYYDIKENEVLQII-RHVKHSIFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAP 250
           +T  +Y+IKE + L ++ RH  H +F+K   G  I L+V   DT+ ++K ++  +     
Sbjct: 1   RTFLHYNIKEGDTLHLVPRHAHHMVFIKTATGNTITLKVDPNDTIENIKSQIQAKKMIPI 60

Query: 251 DSQRLVFK-RQQLEDDRNLASYKIVNESIVNLT 282
           D Q+L+ + R+QL++   L+ Y I +++I+ LT
Sbjct: 61  DQQKLITRYRKQLDNSLTLSDYNIEDKAILYLT 93


>gi|347966900|ref|XP_321092.3| AGAP001969-PA [Anopheles gambiae str. PEST]
 gi|333469849|gb|EAA01267.4| AGAP001969-PA [Anopheles gambiae str. PEST]
          Length = 309

 Score =  105 bits (261), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 83/279 (29%), Positives = 141/279 (50%), Gaps = 10/279 (3%)

Query: 9   IEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---NDSGVMKLY 65
           +E +K +I  +  EEI  +   + +AG+QLE+G  + +Y I   S IH      G M+++
Sbjct: 23  VESVKKQIDER--EEIPPNQQRMIFAGKQLEDGRQLQEYSIIKGSTIHLVLRLKGGMQIF 80

Query: 66  FKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINN 125
            K  +  KT  +      T+E++K  I+ RE IP ++  + + GK +E    L   +I  
Sbjct: 81  VKMLTG-KTIAVDTEPEATVESVKKQIDEREEIPPNQQRMIFAGKQLEDGRQLQEYSIIK 139

Query: 126 EDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRG 184
             T+ ++   K   +IFV+  T  T+ ++     TV  VKK ++  R  IP     +   
Sbjct: 140 GSTVHLVLRLKGGMQIFVKMLTGKTIAVDTEPEATVESVKKQIDE-REEIPPNQQRMIFA 198

Query: 185 GEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKL 242
           G+QL++ + L  Y I +   + ++  +K    IFVK+L G+ I ++     TV  VK ++
Sbjct: 199 GKQLEDGRQLQEYSIIKGSTVHLVLRLKGGMQIFVKMLTGKTIAVDTEPEATVESVKKQI 258

Query: 243 FREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
                  P+ QR++F  +QLED R L  Y I+  S V+L
Sbjct: 259 DEREEIPPNQQRMIFAGKQLEDGRQLQEYSIIKGSTVHL 297



 Score = 85.1 bits (209), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 65/223 (29%), Positives = 112/223 (50%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ K  +  KT  +      T+E++K  I+ RE IP ++  + + GK +E    L   
Sbjct: 1   MQIFVKMLTG-KTIAVDTEPEATVESVKKQIDEREEIPPNQQRMIFAGKQLEDGRQLQEY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           +I    T+ ++   K   +IFV+  T  T+ ++     TV  VKK ++  R  IP     
Sbjct: 60  SIIKGSTIHLVLRLKGGMQIFVKMLTGKTIAVDTEPEATVESVKKQIDE-REEIPPNQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           +   G+QL++ + L  Y I +   + ++  +K    IFVK+L G+ I ++     TV  V
Sbjct: 119 MIFAGKQLEDGRQLQEYSIIKGSTVHLVLRLKGGMQIFVKMLTGKTIAVDTEPEATVESV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K ++       P+ QR++F  +QLED R L  Y I+  S V+L
Sbjct: 179 KKQIDEREEIPPNQQRMIFAGKQLEDGRQLQEYSIIKGSTVHL 221



 Score = 65.1 bits (157), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 56/211 (26%), Positives = 104/211 (49%), Gaps = 8/211 (3%)

Query: 9   IEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---NDSGVMKLY 65
           +E +K +I  +  EEI  +   + +AG+QLE+G  + +Y I   S +H      G M+++
Sbjct: 99  VESVKKQIDER--EEIPPNQQRMIFAGKQLEDGRQLQEYSIIKGSTVHLVLRLKGGMQIF 156

Query: 66  FKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINN 125
            K  +  KT  +      T+E++K  I+ RE IP ++  + + GK +E    L   +I  
Sbjct: 157 VKMLTG-KTIAVDTEPEATVESVKKQIDEREEIPPNQQRMIFAGKQLEDGRQLQEYSIIK 215

Query: 126 EDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRG 184
             T+ ++   K   +IFV+  T  T+ ++     TV  VKK ++  R  IP     +   
Sbjct: 216 GSTVHLVLRLKGGMQIFVKMLTGKTIAVDTEPEATVESVKKQIDE-REEIPPNQQRMIFA 274

Query: 185 GEQLQNLKTLAYYDIKENEVLQIIRHVKHSI 215
           G+QL++ + L  Y I +   + ++  +K  +
Sbjct: 275 GKQLEDGRQLQEYSIIKGSTVHLVLRLKGGL 305


>gi|224321|prf||1101405A ubiquitin precursor
          Length = 191

 Score =  104 bits (259), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 66/180 (36%), Positives = 104/180 (57%), Gaps = 4/180 (2%)

Query: 105 IYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDV 163
           + + GK +E   TL   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +V
Sbjct: 5   LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 64

Query: 164 KKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLN 221
           K  ++  +  IP +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L 
Sbjct: 65  KSKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLT 123

Query: 222 GRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           G+ I LEV   DT+ +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 124 GKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 183



 Score =  100 bits (250), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 65/186 (34%), Positives = 106/186 (56%), Gaps = 6/186 (3%)

Query: 27  DLPELFYAGQQLENGLTVIDYGIPNNSVIH---NDSGVMKLYFKTPSNEKTFELKANRSD 83
           D   L +AG+QLE+G T+ DY I   S +H      G M+++ KT +  KT  L+   SD
Sbjct: 1   DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG-KTITLEVESSD 59

Query: 84  TIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEIFV 143
           TI+N+K  I+ +EGIP  +  + + GK +E   TL   NI  E TL ++   +   +IFV
Sbjct: 60  TIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFV 119

Query: 144 QTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKEN 202
           +T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TL+ Y+I++ 
Sbjct: 120 KTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 178

Query: 203 EVLQII 208
             L ++
Sbjct: 179 STLHLV 184



 Score = 77.0 bits (188), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 49/135 (36%), Positives = 77/135 (57%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 53  LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 110

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 111 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 169

Query: 118 LDVLNINNEDTLQMI 132
           L   NI  E TL ++
Sbjct: 170 LSDYNIQKESTLHLV 184


>gi|124784704|gb|ABN14989.1| polyubiquitin [Taenia asiatica]
          Length = 200

 Score =  103 bits (258), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 66/187 (35%), Positives = 107/187 (57%), Gaps = 4/187 (2%)

Query: 98  IPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRR 156
           IP  +  + + GK +E   TL   NI  E TL ++   +   +IFV+T T  T+ LEV  
Sbjct: 2   IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEP 61

Query: 157 AHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS-- 214
           + ++ +VK  ++  +  IP +   L   G+QL++ +TL+ Y+I++   L ++  ++    
Sbjct: 62  SDSIENVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 120

Query: 215 IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIV 274
           IFVK L G+ I LEV   D++ +VK K+  + G  PD QRL+F  +QLED R L+ Y I 
Sbjct: 121 IFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 180

Query: 275 NESIVNL 281
            ES ++L
Sbjct: 181 KESTLHL 187



 Score =  100 bits (250), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 69/201 (34%), Positives = 113/201 (56%), Gaps = 8/201 (3%)

Query: 24  ILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---NDSGVMKLYFKTPSNEKTFELKAN 80
           I  D   L +AG+QLE+G T+ DY I   S +H      G M+++ KT +  KT  L+  
Sbjct: 2   IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG-KTITLEVE 60

Query: 81  RSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMISVPKELQE 140
            SD+IEN+K  I+ +EGIP  +  + + GK +E   TL   NI  E TL ++   +   +
Sbjct: 61  PSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 120

Query: 141 IFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDI 199
           IFV+T T  T+ LEV  + ++ +VK  ++  +  IP +   L   G+QL++ +TL+ Y+I
Sbjct: 121 IFVKTLTGKTITLEVEPSDSIENVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYNI 179

Query: 200 KENEVLQIIRHVKHS--IFVK 218
           ++   L ++  ++    IFVK
Sbjct: 180 QKESTLHLVLRLRGGMRIFVK 200



 Score = 82.8 bits (203), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 44/111 (39%), Positives = 68/111 (61%), Gaps = 2/111 (1%)

Query: 173 CIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVA 230
           CIP +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV 
Sbjct: 1   CIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 60

Query: 231 KFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
             D++ +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 61  PSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 111



 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 53/147 (36%), Positives = 82/147 (55%), Gaps = 6/147 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 57  LEVEPSDSIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 114

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SD+IEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 115 LRGGMQIFVKTLTG-KTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 173

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQ 144
           L   NI  E TL ++   +    IFV+
Sbjct: 174 LSDYNIQKESTLHLVLRLRGGMRIFVK 200


>gi|1326022|emb|CAA25706.1| unnamed protein product [Saccharomyces cerevisiae]
          Length = 191

 Score =  103 bits (258), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 66/180 (36%), Positives = 103/180 (57%), Gaps = 4/180 (2%)

Query: 105 IYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDV 163
           + + GK +E   TL   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +V
Sbjct: 5   LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 64

Query: 164 KKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLN 221
           K  ++  +  IP +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L 
Sbjct: 65  KSKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLT 123

Query: 222 GRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           G+ I LEV   DT+ +VK K+  + G  PD QRL+F   QLED R L+ Y I  ES ++L
Sbjct: 124 GKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGNQLEDGRTLSDYNIQKESTLHL 183



 Score =  100 bits (249), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 65/190 (34%), Positives = 107/190 (56%), Gaps = 6/190 (3%)

Query: 27  DLPELFYAGQQLENGLTVIDYGIPNNSVIH---NDSGVMKLYFKTPSNEKTFELKANRSD 83
           D   L +AG+QLE+G T+ DY I   S +H      G M+++ KT +  KT  L+   SD
Sbjct: 1   DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG-KTITLEVESSD 59

Query: 84  TIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEIFV 143
           TI+N+K  I+ +EGIP  +  + + GK +E   TL   NI  E TL ++   +   +IFV
Sbjct: 60  TIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFV 119

Query: 144 QTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKEN 202
           +T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G QL++ +TL+ Y+I++ 
Sbjct: 120 KTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPPDQQRLIFAGNQLEDGRTLSDYNIQKE 178

Query: 203 EVLQIIRHVK 212
             L ++  ++
Sbjct: 179 STLHLVLRLR 188



 Score = 74.7 bits (182), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 48/135 (35%), Positives = 76/135 (56%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 53  LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 110

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + G  +E   T
Sbjct: 111 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGNQLEDGRT 169

Query: 118 LDVLNINNEDTLQMI 132
           L   NI  E TL ++
Sbjct: 170 LSDYNIQKESTLHLV 184


>gi|56199554|gb|AAV84266.1| ubiquitin [Culicoides sonorensis]
          Length = 191

 Score =  103 bits (257), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 66/180 (36%), Positives = 104/180 (57%), Gaps = 4/180 (2%)

Query: 105 IYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDV 163
           + + GK +E   TL   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +V
Sbjct: 5   LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 64

Query: 164 KKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLN 221
           K  ++  +  IP +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L 
Sbjct: 65  KAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLT 123

Query: 222 GRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           G+ I LEV   DT+ +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 124 GKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 183



 Score =  100 bits (250), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 66/186 (35%), Positives = 106/186 (56%), Gaps = 6/186 (3%)

Query: 27  DLPELFYAGQQLENGLTVIDYGIPNNSVIH---NDSGVMKLYFKTPSNEKTFELKANRSD 83
           D   L +AG+QLE+G T+ DY I   S +H      G M+++ KT +  KT  L+   SD
Sbjct: 1   DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG-KTITLEVEPSD 59

Query: 84  TIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEIFV 143
           TIEN+K  I+ +EGIP  +  + + GK +E   TL   NI  E TL ++   +   +IFV
Sbjct: 60  TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFV 119

Query: 144 QTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKEN 202
           +T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TL+ Y+I++ 
Sbjct: 120 KTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 178

Query: 203 EVLQII 208
             L ++
Sbjct: 179 STLHLV 184



 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 51/135 (37%), Positives = 77/135 (57%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 53  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 110

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 111 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 169

Query: 118 LDVLNINNEDTLQMI 132
           L   NI  E TL ++
Sbjct: 170 LSDYNIQKESTLHLV 184


>gi|86370988|gb|ABC94632.1| ubiquitin C [Ictalurus punctatus]
          Length = 192

 Score =  103 bits (257), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 66/180 (36%), Positives = 104/180 (57%), Gaps = 4/180 (2%)

Query: 105 IYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDV 163
           + + GK +E   TL   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +V
Sbjct: 6   LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 65

Query: 164 KKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLN 221
           K  ++  +  IP +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L 
Sbjct: 66  KAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLT 124

Query: 222 GRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           G+ I LEV   DT+ +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 125 GKTITLEVEPSDTIGNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 184



 Score =  101 bits (251), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 66/186 (35%), Positives = 106/186 (56%), Gaps = 6/186 (3%)

Query: 27  DLPELFYAGQQLENGLTVIDYGIPNNSVIH---NDSGVMKLYFKTPSNEKTFELKANRSD 83
           D   L +AG+QLE+G T+ DY I   S +H      G M+++ KT +  KT  L+   SD
Sbjct: 2   DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG-KTITLEVEPSD 60

Query: 84  TIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEIFV 143
           TIEN+K  I+ +EGIP  +  + + GK +E   TL   NI  E TL ++   +   +IFV
Sbjct: 61  TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFV 120

Query: 144 QTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKEN 202
           +T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TL+ Y+I++ 
Sbjct: 121 KTLTGKTITLEVEPSDTIGNVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 179

Query: 203 EVLQII 208
             L ++
Sbjct: 180 STLHLV 185



 Score = 77.0 bits (188), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 50/135 (37%), Positives = 76/135 (56%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 54  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 111

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 112 LRGGMQIFVKTLTG-KTITLEVEPSDTIGNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 170

Query: 118 LDVLNINNEDTLQMI 132
           L   NI  E TL ++
Sbjct: 171 LSDYNIQKESTLHLV 185



 Score = 39.3 bits (90), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 17/32 (53%), Positives = 22/32 (68%)

Query: 250 PDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 1   PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 32


>gi|115187323|gb|ABI84246.1| polyubiquitin 10 [Arachis hypogaea]
          Length = 192

 Score =  103 bits (256), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 69/193 (35%), Positives = 111/193 (57%), Gaps = 5/193 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKLFREIGQAPD 251
           K K+  + G  PD
Sbjct: 179 KAKIQDKEGIPPD 191



 Score = 94.7 bits (234), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 58/145 (40%), Positives = 88/145 (60%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TLA Y+
Sbjct: 2   QIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F  +QLED R LA Y I  ES ++L
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHL 145



 Score = 90.1 bits (222), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 62/181 (34%), Positives = 100/181 (55%), Gaps = 7/181 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++      P 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPD 191

Query: 177 E 177
           +
Sbjct: 192 Q 192


>gi|342884385|gb|EGU84600.1| hypothetical protein FOXB_04788 [Fusarium oxysporum Fo5176]
          Length = 890

 Score =  103 bits (256), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 67/190 (35%), Positives = 102/190 (53%), Gaps = 20/190 (10%)

Query: 95  REGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEIFVQTPT-STVKLE 153
           +EGIP  +  + + GK +E   TL   NI  E TL ++   +   +IFV+T T  T+ LE
Sbjct: 2   KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 61

Query: 154 VRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK- 212
           V  + T+                 D  L   G+QL++ +TL+ Y+I++   L ++  ++ 
Sbjct: 62  VESSDTI-----------------DNRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRG 104

Query: 213 -HSIFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASY 271
              IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+F  +QLED R L+ Y
Sbjct: 105 GMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 164

Query: 272 KIVNESIVNL 281
            I  ES ++L
Sbjct: 165 NIQKESTLHL 174



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 61/196 (31%), Positives = 101/196 (51%), Gaps = 22/196 (11%)

Query: 21  EEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---NDSGVMKLYFKTPSNEKTFEL 77
           +E I  D   L +AG+QLE+G T+ DY I   S +H      G M+++ KT +  KT  L
Sbjct: 2   KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG-KTITL 60

Query: 78  KANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMISVPKE 137
           +   SDTI+N                 + + GK +E   TL   NI  E TL ++   + 
Sbjct: 61  EVESSDTIDN----------------RLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRG 104

Query: 138 LQEIFVQTPT-STVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAY 196
             +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TL+ 
Sbjct: 105 GMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSD 163

Query: 197 YDIKENEVLQIIRHVK 212
           Y+I++   L ++  ++
Sbjct: 164 YNIQKESTLHLVLRLR 179


>gi|195587566|ref|XP_002083532.1| GD13313 [Drosophila simulans]
 gi|194195541|gb|EDX09117.1| GD13313 [Drosophila simulans]
          Length = 195

 Score =  103 bits (256), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 69/193 (35%), Positives = 111/193 (57%), Gaps = 5/193 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 KDKLFREIGQAPD 251
           K K+  + G  PD
Sbjct: 179 KAKIQDKEGIPPD 191



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 56/145 (38%), Positives = 88/145 (60%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TL+ Y+
Sbjct: 2   QIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F  +QLED R L+ Y I  ES ++L
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHL 145



 Score = 90.9 bits (224), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 64/183 (34%), Positives = 100/183 (54%), Gaps = 7/183 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++      P 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPD 191

Query: 177 EDC 179
           +  
Sbjct: 192 QGS 194


>gi|353237461|emb|CCA69433.1| related to UBI4-Ubiquitin [Piriformospora indica DSM 11827]
          Length = 195

 Score =  103 bits (256), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 73/221 (33%), Positives = 109/221 (49%), Gaps = 35/221 (15%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++      P +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQ-- 117

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSIFVKLLNGRYIILEVAKFDTVRDVKD 240
                                          +  IFVK L G+ I LEV   DT+ +VK 
Sbjct: 118 -------------------------------RMQIFVKTLTGKTITLEVESSDTIDNVKT 146

Query: 241 KLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 147 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 187



 Score = 77.4 bits (189), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 62/216 (28%), Positives = 108/216 (50%), Gaps = 42/216 (19%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  +            
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRM------------ 119

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
                                 +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 120 ----------------------QIFVKTLTGKTITLEVESSDTIDNVKTKIQD-KEGIPP 156

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 157 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 192


>gi|170034811|ref|XP_001845266.1| ubiquitin [Culex quinquefasciatus]
 gi|167876396|gb|EDS39779.1| ubiquitin [Culex quinquefasciatus]
          Length = 323

 Score =  102 bits (253), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 79/309 (25%), Positives = 159/309 (51%), Gaps = 31/309 (10%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---- 56
           ++V+ +  ++ +K+ I  K      +    L    + +E+G T+ DY + + S IH    
Sbjct: 18  LQVEPSNTVQDVKVMIQQKAGCPTEQQC--LIADSKVMEDGRTLADYSVQDKSTIHVAQQ 75

Query: 57  ------NDSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGK 110
                 + +  M+++ KT +  KT  L+    +++ ++K +++ +EG P ++  + +  +
Sbjct: 76  AGGPCTDCNPSMEIFVKTLTG-KTIALRLRSFNSVGDVKIMVQEKEGFPPNQQRLIFDCQ 134

Query: 111 LIESYITLDVLNINNEDTLQMI-------SVPKELQEIFVQTPTS-TVKLEVRRAHTVLD 162
           L+E   TL   N+ + D + ++        V     EIFV++ T  T+ + VRR +T  +
Sbjct: 135 LLEDGRTLSGYNVKHGDIMLLLLQSGGSCDVCNPNMEIFVKSLTGKTMTMPVRRFNTAEE 194

Query: 163 VKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS-------- 214
           VK M+   +  IP +   L    +QL + +TLA Y I+  + + ++  +           
Sbjct: 195 VKIMILQ-KEGIPLDQQRLVFNSKQLDDERTLADYGIQNKDTIHLLIRLGGPCNVCNPYM 253

Query: 215 -IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKI 273
            I++KL  G+ + L   +F+TV+DVK+ +  + G  P+ QRL+F +Q+LE+  +L+ Y I
Sbjct: 254 EIYIKLSAGKTMTLRPRRFNTVKDVKNMILDKEGYPPNQQRLIFNQQELENGCSLSYYHI 313

Query: 274 VNESIVNLT 282
            ++ I+NL 
Sbjct: 314 QDKDIINLA 322



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 69/231 (29%), Positives = 120/231 (51%), Gaps = 28/231 (12%)

Query: 73  KTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTL--- 129
           K F L+   S+T++++K +I+ + G P  +  +    K++E   TL   ++ ++ T+   
Sbjct: 14  KHFTLQVEPSNTVQDVKVMIQQKAGCPTEQQCLIADSKVMEDGRTLADYSVQDKSTIHVA 73

Query: 130 QMISVP----KELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSE-----DC 179
           Q    P        EIFV+T T  T+ L +R  ++V DVK MV+      P++     DC
Sbjct: 74  QQAGGPCTDCNPSMEIFVKTLTGKTIALRLRSFNSVGDVKIMVQEKEGFPPNQQRLIFDC 133

Query: 180 ELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS---------IFVKLLNGRYIILEVA 230
           +L   G      +TL+ Y++K  +++ ++     S         IFVK L G+ + + V 
Sbjct: 134 QLLEDG------RTLSGYNVKHGDIMLLLLQSGGSCDVCNPNMEIFVKSLTGKTMTMPVR 187

Query: 231 KFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           +F+T  +VK  + ++ G   D QRLVF  +QL+D+R LA Y I N+  ++L
Sbjct: 188 RFNTAEEVKIMILQKEGIPLDQQRLVFNSKQLDDERTLADYGIQNKDTIHL 238



 Score = 37.7 bits (86), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 18/61 (29%), Positives = 36/61 (59%)

Query: 222 GRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           G++  L+V   +TV+DVK  + ++ G   + Q L+   + +ED R LA Y + ++S +++
Sbjct: 13  GKHFTLQVEPSNTVQDVKVMIQQKAGCPTEQQCLIADSKVMEDGRTLADYSVQDKSTIHV 72

Query: 282 T 282
            
Sbjct: 73  A 73


>gi|399525602|gb|AFP44113.1| ubiquitin, partial [Lycoris longituba]
          Length = 187

 Score =  102 bits (253), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 67/186 (36%), Positives = 108/186 (58%), Gaps = 5/186 (2%)

Query: 60  GVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLD 119
           G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL 
Sbjct: 2   GGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLA 60

Query: 120 VLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSED 178
             NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP + 
Sbjct: 61  DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQ 119

Query: 179 CELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVR 236
             L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ 
Sbjct: 120 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDTID 179

Query: 237 DVKDKL 242
           +VK K+
Sbjct: 180 NVKAKI 185



 Score = 94.7 bits (234), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 58/145 (40%), Positives = 88/145 (60%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TLA Y+
Sbjct: 5   QIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLADYN 63

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+
Sbjct: 64  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 123

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F  +QLED R LA Y I  ES ++L
Sbjct: 124 FAGKQLEDGRTLADYNIQKESTLHL 148



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 61/172 (35%), Positives = 98/172 (56%), Gaps = 7/172 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 18  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 75

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 76  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 134

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVE 168
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++
Sbjct: 135 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDTIDNVKAKIQ 186


>gi|379771652|gb|AFD18177.1| ubiquitin C, partial [Mylabris cichorii]
          Length = 204

 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 65/179 (36%), Positives = 104/179 (58%), Gaps = 4/179 (2%)

Query: 82  SDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEI 141
           SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   NI  E TL ++   +   +I
Sbjct: 4   SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQI 63

Query: 142 FVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIK 200
           FV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TL+ Y+I+
Sbjct: 64  FVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 122

Query: 201 ENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVF 257
           +   L ++  ++    IFVK L G+ I LEV   DT+ +V+ K+  + G  PD QRL+ 
Sbjct: 123 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVEAKIQDKEGIPPDQQRLIL 181



 Score = 88.2 bits (217), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 63/179 (35%), Positives = 98/179 (54%), Gaps = 7/179 (3%)

Query: 3   VKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---NDS 59
           V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H      
Sbjct: 1   VEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 58

Query: 60  GVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLD 119
           G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL 
Sbjct: 59  GGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLS 117

Query: 120 VLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSE 177
             NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +V+  ++      P +
Sbjct: 118 DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVEAKIQDKEGIPPDQ 176



 Score = 81.6 bits (200), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 48/130 (36%), Positives = 77/130 (59%), Gaps = 3/130 (2%)

Query: 154 VRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKH 213
           V  + T+ +VK  ++  +  IP +   L   G+QL++ +TL+ Y+I++   L ++  ++ 
Sbjct: 1   VEPSDTIENVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRG 59

Query: 214 S--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASY 271
              IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+F  +QLED R L+ Y
Sbjct: 60  GMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 119

Query: 272 KIVNESIVNL 281
            I  ES ++L
Sbjct: 120 NIQKESTLHL 129



 Score = 61.6 bits (148), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 40/102 (39%), Positives = 61/102 (59%), Gaps = 6/102 (5%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 75  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 132

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIP 99
             G M+++ KT +  KT  L+   SDTIEN++  I+ +EGIP
Sbjct: 133 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVEAKIQDKEGIP 173


>gi|182407852|gb|ACB87917.1| polyubiquitin 2 [Malus x domestica]
          Length = 177

 Score =  101 bits (251), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 65/177 (36%), Positives = 101/177 (57%), Gaps = 4/177 (2%)

Query: 95  REGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLE 153
           +EGIP  +  + + GK +E   TL   NI  E TL ++   +   +IFV+T T  T+ LE
Sbjct: 2   KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 61

Query: 154 VRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKH 213
           V  + T+ +VK  ++  +  IP +   L   G+QL++ +TLA Y+I++   L ++  ++ 
Sbjct: 62  VESSDTIDNVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRR 120

Query: 214 S--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNL 268
              IFVK L G+ I LEV   DT+ +VK K+  + G  PD Q L+F  +QLED R L
Sbjct: 121 GMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKDGIPPDQQTLIFAGKQLEDGRTL 177



 Score = 94.7 bits (234), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 64/178 (35%), Positives = 100/178 (56%), Gaps = 6/178 (3%)

Query: 21  EEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---NDSGVMKLYFKTPSNEKTFEL 77
           +E I  D   L +AG+QLE+G T+ DY I   S +H      G M+++ KT +  KT  L
Sbjct: 2   KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG-KTITL 60

Query: 78  KANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMISVPKE 137
           +   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   NI  E TL ++   + 
Sbjct: 61  EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRR 120

Query: 138 LQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTL 194
             +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TL
Sbjct: 121 GMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KDGIPPDQQTLIFAGKQLEDGRTL 177



 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 46/111 (41%), Positives = 67/111 (60%), Gaps = 2/111 (1%)

Query: 173 CIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVA 230
            IP +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV 
Sbjct: 4   GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 63

Query: 231 KFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
             DT+ +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 64  SSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 114


>gi|39939489|gb|AAR32784.1| polyubiquitin [Clusia minor]
          Length = 223

 Score =  101 bits (251), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 66/173 (38%), Positives = 100/173 (57%), Gaps = 4/173 (2%)

Query: 112 IESYITLDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESM 170
           +E   TL   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  
Sbjct: 2   LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD- 60

Query: 171 RICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILE 228
           +  IP +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LE
Sbjct: 61  KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 120

Query: 229 VAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           V   DT+ +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 121 VESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 173



 Score =  100 bits (248), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 68/193 (35%), Positives = 109/193 (56%), Gaps = 8/193 (4%)

Query: 37  QLENGLTVIDYGIPNNSVIH---NDSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIE 93
           QLE+G T+ DY I   S +H      G M+++ KT +  KT  L+   SDTI+N+K  I+
Sbjct: 1   QLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQ 59

Query: 94  VREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKL 152
            +EGIP  +  + + GK +E   TL   NI  E TL ++   +   +IFV+T T  T+ L
Sbjct: 60  DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL 119

Query: 153 EVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           EV  + T+ +VK  ++  +  IP +   L   G+QL++ +TLA Y+I++   L ++  ++
Sbjct: 120 EVESSDTIDNVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 178

Query: 213 HS--IFVKLLNGR 223
               IFVK L G+
Sbjct: 179 GGMQIFVKTLTGK 191



 Score = 81.6 bits (200), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 54/151 (35%), Positives = 85/151 (56%), Gaps = 6/151 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 43  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 100

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 101 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 159

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS 148
           L   NI  E TL ++   +   +IFV+T T 
Sbjct: 160 LADYNIQKESTLHLVLRLRGGMQIFVKTLTG 190



 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 42/97 (43%), Positives = 61/97 (62%), Gaps = 2/97 (2%)

Query: 187 QLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFR 244
           QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  
Sbjct: 1   QLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD 60

Query: 245 EIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 61  KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 97


>gi|313215765|emb|CBY16339.1| unnamed protein product [Oikopleura dioica]
          Length = 188

 Score =  101 bits (251), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 66/184 (35%), Positives = 107/184 (58%), Gaps = 5/184 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENV 178

Query: 239 KDKL 242
           K K+
Sbjct: 179 KAKI 182



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 56/145 (38%), Positives = 88/145 (60%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TL+ Y+
Sbjct: 2   QIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F  +QLED R L+ Y I  ES ++L
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHL 145



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 63/172 (36%), Positives = 98/172 (56%), Gaps = 7/172 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVE 168
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQ 183



 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 38/100 (38%), Positives = 58/100 (58%), Gaps = 6/100 (6%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREG 97
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +E 
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEA 187


>gi|182407854|gb|ACB87918.1| polyubiquitin 3 [Malus x domestica]
          Length = 188

 Score =  100 bits (250), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 66/182 (36%), Positives = 104/182 (57%), Gaps = 4/182 (2%)

Query: 73  KTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMI 132
           KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   NI  E TL ++
Sbjct: 7   KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 66

Query: 133 SVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNL 191
              +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ 
Sbjct: 67  LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQRLIFAGKQLEDG 125

Query: 192 KTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQA 249
           +TLA Y+I++   L ++  ++    +FVK L G  I LEV   DT+ +VKDK+  + G  
Sbjct: 126 RTLADYNIQKESTLHLVLRLRGGMQMFVKTLTGNTITLEVETSDTIDNVKDKIQDKEGIP 185

Query: 250 PD 251
           PD
Sbjct: 186 PD 187



 Score = 90.1 bits (222), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 53/135 (39%), Positives = 81/135 (60%), Gaps = 3/135 (2%)

Query: 149 TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQII 208
           T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TLA Y+I++   L ++
Sbjct: 8   TITLEVESSDTIDNVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 66

Query: 209 RHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDR 266
             ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+F  +QLED R
Sbjct: 67  LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 126

Query: 267 NLASYKIVNESIVNL 281
            LA Y I  ES ++L
Sbjct: 127 TLADYNIQKESTLHL 141



 Score = 88.6 bits (218), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 61/181 (33%), Positives = 100/181 (55%), Gaps = 7/181 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 11  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 68

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 69  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 127

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           L   NI  E TL ++   +   ++FV+T T  T+ LEV  + T+ +VK  ++      P 
Sbjct: 128 LADYNIQKESTLHLVLRLRGGMQMFVKTLTGNTITLEVETSDTIDNVKDKIQDKEGIPPD 187

Query: 177 E 177
           +
Sbjct: 188 Q 188



 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/65 (49%), Positives = 41/65 (63%)

Query: 217 VKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNE 276
           VK L G+ I LEV   DT+ +VK K+  + G  PD QRL+F  +QLED R LA Y I  E
Sbjct: 1   VKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKE 60

Query: 277 SIVNL 281
           S ++L
Sbjct: 61  STLHL 65


>gi|149391401|gb|ABR25718.1| polyubiquitin containing 7 ubiquitin monomers [Oryza sativa Indica
           Group]
          Length = 178

 Score =  100 bits (250), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 65/168 (38%), Positives = 98/168 (58%), Gaps = 4/168 (2%)

Query: 117 TLDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIP 175
           TL   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP
Sbjct: 4   TLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIP 62

Query: 176 SEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFD 233
            +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   D
Sbjct: 63  PDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSD 122

Query: 234 TVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           T+ +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 123 TIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 170



 Score = 88.6 bits (218), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 59/173 (34%), Positives = 97/173 (56%), Gaps = 6/173 (3%)

Query: 40  NGLTVIDYGIPNNSVIH---NDSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVRE 96
           +G T+ DY I   S +H      G M+++ KT +  KT  L+   SDTI+N+K  I+ +E
Sbjct: 1   DGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE 59

Query: 97  GIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVR 155
           GIP  +  + + GK +E   TL   NI  E TL ++   +   +IFV+T T  T+ LEV 
Sbjct: 60  GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 119

Query: 156 RAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQII 208
            + T+ +VK  ++  +  IP +   L   G+QL++ +TLA Y+I++   L ++
Sbjct: 120 SSDTIDNVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 171



 Score = 77.4 bits (189), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 49/135 (36%), Positives = 77/135 (57%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 40  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 97

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 98  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 156

Query: 118 LDVLNINNEDTLQMI 132
           L   NI  E TL ++
Sbjct: 157 LADYNIQKESTLHLV 171



 Score = 72.0 bits (175), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 40/92 (43%), Positives = 57/92 (61%), Gaps = 2/92 (2%)

Query: 192 KTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQA 249
           +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  
Sbjct: 3   RTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIP 62

Query: 250 PDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 63  PDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 94


>gi|71534894|gb|AAZ32851.1| pentameric polyubiquitin [Medicago sativa]
          Length = 189

 Score =  100 bits (249), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 65/168 (38%), Positives = 98/168 (58%), Gaps = 4/168 (2%)

Query: 117 TLDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIP 175
           TL   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP
Sbjct: 1   TLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIP 59

Query: 176 SEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFD 233
            +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   D
Sbjct: 60  PDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSD 119

Query: 234 TVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           T+ +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 120 TIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 167



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 66/191 (34%), Positives = 106/191 (55%), Gaps = 8/191 (4%)

Query: 43  TVIDYGIPNNSVIH---NDSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIP 99
           T+ DY I   S +H      G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP
Sbjct: 1   TLADYNIQKESTLHLVLRLRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIP 59

Query: 100 VHEYDIYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAH 158
             +  + + GK +E   TL   NI  E TL ++   +   +IFV+T T  T+ LEV  + 
Sbjct: 60  PDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSD 119

Query: 159 TVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IF 216
           T+ +VK  ++  +  IP +   L   G+QL++ +TLA Y+I++   L ++  ++    IF
Sbjct: 120 TIDNVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIF 178

Query: 217 VKLLNGRYIIL 227
           VK L G+ I L
Sbjct: 179 VKTLTGKTITL 189



 Score = 82.0 bits (201), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 54/151 (35%), Positives = 85/151 (56%), Gaps = 6/151 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 37  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 94

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 95  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 153

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS 148
           L   NI  E TL ++   +   +IFV+T T 
Sbjct: 154 LADYNIQKESTLHLVLRLRGGMQIFVKTLTG 184


>gi|578550|emb|CAA80336.1| ubiquitin [Tetrahymena pyriformis]
          Length = 225

 Score =  100 bits (249), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 72/213 (33%), Positives = 120/213 (56%), Gaps = 4/213 (1%)

Query: 71  NEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQ 130
           N KT  L+   SDTIE +K +I+ +EGI + +  + + GK +E+  TL   +I  + TLQ
Sbjct: 9   NGKTMTLEVTHSDTIEKVKSLIQNKEGILIEQQRLLHTGKNLENQRTLSYYSIQIQSTLQ 68

Query: 131 MISVPKELQEIFVQT-PTSTVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQ 189
           +      + +IFVQT    T+ L+V  ++T+ D+K M+ S +  IP ++      G+ L+
Sbjct: 69  LEIRQSGVMQIFVQTLAGKTITLDVTSSNTINDIKSMI-SDKESIPPDELRFIFAGKFLE 127

Query: 190 NLKTLAYYDI-KENEVLQIIRHVKHSIFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQ 248
             +TL+  +I KEN +  ++  V   IFV+ L  +   LEV   D ++ VK K+  + G 
Sbjct: 128 EERTLSDLNIQKENTLHLVLIRVSMKIFVRTL-CKIFTLEVDPSDNIKTVKTKIQDKEGI 186

Query: 249 APDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
             D  +L+F   +LED++ L+SY I  +S +NL
Sbjct: 187 PSDQLKLIFSGTKLEDEKTLSSYNIQKDSTLNL 219



 Score = 90.5 bits (223), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 69/211 (32%), Positives = 114/211 (54%), Gaps = 8/211 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V  ++ IEK+K  I  K  E IL +   L + G+ LEN  T+  Y I   S +     
Sbjct: 15  LEVTHSDTIEKVKSLIQNK--EGILIEQQRLLHTGKNLENQRTLSYYSIQIQSTLQLEIR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
            SGVM+++ +T +  KT  L    S+TI +IK +I  +E IP  E    + GK +E   T
Sbjct: 73  QSGVMQIFVQTLAG-KTITLDVTSSNTINDIKSMISDKESIPPDELRFIFAGKFLEEERT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTSTVKLEVRRAHTVLDVKKMVESMRICIPSE 177
           L  LNI  E+TL ++ +   ++ IFV+T      LEV  +  +  VK  ++  +  IPS+
Sbjct: 132 LSDLNIQKENTLHLVLIRVSMK-IFVRTLCKIFTLEVDPSDNIKTVKTKIQD-KEGIPSD 189

Query: 178 DCELFRGGEQLQNLKTLAYYDIKENEVLQII 208
             +L   G +L++ KTL+ Y+I+++  L ++
Sbjct: 190 QLKLIFSGTKLEDEKTLSSYNIQKDSTLNLV 220



 Score = 43.5 bits (101), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 38/67 (56%)

Query: 215 IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIV 274
           IF K+LNG+ + LEV   DT+  VK  +  + G   + QRL+   + LE+ R L+ Y I 
Sbjct: 3   IFAKILNGKTMTLEVTHSDTIEKVKSLIQNKEGILIEQQRLLHTGKNLENQRTLSYYSIQ 62

Query: 275 NESIVNL 281
            +S + L
Sbjct: 63  IQSTLQL 69


>gi|169635149|gb|ACA58351.1| ubiquitin-like protein [Sandersonia aurantiaca]
          Length = 189

 Score =  100 bits (249), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 66/184 (35%), Positives = 107/184 (58%), Gaps = 5/184 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

Query: 239 KDKL 242
           K K+
Sbjct: 179 KAKI 182



 Score = 94.7 bits (234), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 58/145 (40%), Positives = 88/145 (60%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TLA Y+
Sbjct: 2   QIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F  +QLED R LA Y I  ES ++L
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHL 145



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 61/172 (35%), Positives = 98/172 (56%), Gaps = 7/172 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVE 168
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 183



 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/102 (38%), Positives = 61/102 (59%), Gaps = 6/102 (5%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIP 99
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP
Sbjct: 149 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIP 189


>gi|386278574|gb|AFJ04519.1| ubiquitin, partial [Vernicia fordii]
          Length = 176

 Score =  100 bits (248), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 65/168 (38%), Positives = 98/168 (58%), Gaps = 4/168 (2%)

Query: 117 TLDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIP 175
           TL   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP
Sbjct: 2   TLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIP 60

Query: 176 SEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFD 233
            +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   D
Sbjct: 61  PDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSD 120

Query: 234 TVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           T+ +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 121 TIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 168



 Score = 85.9 bits (211), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 58/174 (33%), Positives = 97/174 (55%), Gaps = 6/174 (3%)

Query: 43  TVIDYGIPNNSVIH---NDSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIP 99
           T+ DY I   S +H      G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP
Sbjct: 2   TLADYNIQKESTLHLVLRLRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIP 60

Query: 100 VHEYDIYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAH 158
             +  + + GK +E   TL   NI  E TL ++   +   +IFV+T T  T+ LEV  + 
Sbjct: 61  PDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSD 120

Query: 159 TVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           T+ +VK  ++  +  IP +   L   G+QL++ +TLA Y+I++   L ++  ++
Sbjct: 121 TIDNVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 173



 Score = 77.4 bits (189), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 49/135 (36%), Positives = 77/135 (57%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 38  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 95

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 96  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 154

Query: 118 LDVLNINNEDTLQMI 132
           L   NI  E TL ++
Sbjct: 155 LADYNIQKESTLHLV 169



 Score = 72.0 bits (175), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 40/92 (43%), Positives = 57/92 (61%), Gaps = 2/92 (2%)

Query: 192 KTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQA 249
           +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  
Sbjct: 1   RTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIP 60

Query: 250 PDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 61  PDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 92


>gi|302595966|sp|P0CG83.1|UBIQP_HORVU RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
           Flags: Precursor
 gi|755763|emb|CAA27751.1| unnamed protein product [Hordeum vulgare subsp. vulgare]
          Length = 171

 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 63/163 (38%), Positives = 96/163 (58%), Gaps = 4/163 (2%)

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 2   NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 60

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 61  LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 120

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 121 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 163



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 56/166 (33%), Positives = 92/166 (55%), Gaps = 6/166 (3%)

Query: 47  YGIPNNSVIH---NDSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEY 103
           Y I   S +H      G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  + 
Sbjct: 1   YNIQKESTLHLVLRLRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQ 59

Query: 104 DIYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLD 162
            + + GK +E   TL   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +
Sbjct: 60  RLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDN 119

Query: 163 VKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQII 208
           VK  ++  +  IP +   L   G+QL++ +TLA Y+I++   L ++
Sbjct: 120 VKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 164



 Score = 77.4 bits (189), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 49/135 (36%), Positives = 77/135 (57%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 33  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 90

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 91  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 149

Query: 118 LDVLNINNEDTLQMI 132
           L   NI  E TL ++
Sbjct: 150 LADYNIQKESTLHLV 164



 Score = 67.0 bits (162), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 37/87 (42%), Positives = 53/87 (60%), Gaps = 2/87 (2%)

Query: 197 YDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQR 254
           Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QR
Sbjct: 1   YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 60

Query: 255 LVFKRQQLEDDRNLASYKIVNESIVNL 281
           L+F  +QLED R LA Y I  ES ++L
Sbjct: 61  LIFAGKQLEDGRTLADYNIQKESTLHL 87


>gi|254802948|gb|ACT82769.1| polyubiquitin [Nicotiana tabacum]
          Length = 188

 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 65/168 (38%), Positives = 98/168 (58%), Gaps = 4/168 (2%)

Query: 117 TLDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIP 175
           TL   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP
Sbjct: 1   TLPDYNIQKESTLHLVLRLRGGLQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIP 59

Query: 176 SEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFD 233
            +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   D
Sbjct: 60  PDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSD 119

Query: 234 TVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           T+ +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 120 TIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 167



 Score = 91.7 bits (226), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 64/189 (33%), Positives = 105/189 (55%), Gaps = 8/189 (4%)

Query: 43  TVIDYGIPNNSVIH---NDSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIP 99
           T+ DY I   S +H      G ++++ KT +  KT  L+   SDTI+N+K  I+ +EGIP
Sbjct: 1   TLPDYNIQKESTLHLVLRLRGGLQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIP 59

Query: 100 VHEYDIYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAH 158
             +  + + GK +E   TL   NI  E TL ++   +   +IFV+T T  T+ LEV  + 
Sbjct: 60  PDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSD 119

Query: 159 TVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IF 216
           T+ +VK  ++  +  IP +   L   G+QL++ +TLA Y+I++   L ++  ++    IF
Sbjct: 120 TIDNVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIF 178

Query: 217 VKLLNGRYI 225
           VK L G+ I
Sbjct: 179 VKTLTGKTI 187



 Score = 81.6 bits (200), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 54/151 (35%), Positives = 85/151 (56%), Gaps = 6/151 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 37  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 94

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 95  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 153

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS 148
           L   NI  E TL ++   +   +IFV+T T 
Sbjct: 154 LADYNIQKESTLHLVLRLRGGMQIFVKTLTG 184


>gi|92790176|emb|CAI83757.1| Polyubiqutin 4 [Polyplastron multivesiculatum]
          Length = 177

 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 65/168 (38%), Positives = 99/168 (58%), Gaps = 4/168 (2%)

Query: 117 TLDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIP 175
           TL   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP
Sbjct: 3   TLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIDNVKAKIQD-KEGIP 61

Query: 176 SEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFD 233
            +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   D
Sbjct: 62  PDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSD 121

Query: 234 TVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           T+ +VK K+  + G  PD QRL+F  +QLED+R LA Y I  ES ++L
Sbjct: 122 TIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHL 169



 Score = 84.3 bits (207), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 58/170 (34%), Positives = 95/170 (55%), Gaps = 6/170 (3%)

Query: 43  TVIDYGIPNNSVIH---NDSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIP 99
           T+ DY I   S +H      G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP
Sbjct: 3   TLADYNIQKESTLHLVLRLRGGMQIFVKTLTG-KTITLEVEPSDTIDNVKAKIQDKEGIP 61

Query: 100 VHEYDIYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAH 158
             +  + + GK +E   TL   NI  E TL ++   +   +IFV+T T  T+ LEV  + 
Sbjct: 62  PDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSD 121

Query: 159 TVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQII 208
           T+ +VK  ++  +  IP +   L   G+QL++ +TLA Y+I++   L ++
Sbjct: 122 TIDNVKAKIQD-KEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLV 170



 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 48/135 (35%), Positives = 76/135 (56%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+  T+ DY I   S +H    
Sbjct: 39  LEVEPSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLR 96

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 97  LRGGMQIFVKTLTG-KTITLEVEPSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDNRT 155

Query: 118 LDVLNINNEDTLQMI 132
           L   NI  E TL ++
Sbjct: 156 LADYNIQKESTLHLV 170



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 40/92 (43%), Positives = 58/92 (63%), Gaps = 2/92 (2%)

Query: 192 KTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQA 249
           +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  
Sbjct: 2   RTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIDNVKAKIQDKEGIP 61

Query: 250 PDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           PD QRL+F  +QLED+R LA Y I  ES ++L
Sbjct: 62  PDQQRLIFAGKQLEDNRTLADYNIQKESTLHL 93


>gi|357498827|ref|XP_003619702.1| Ubiquitin-like protein [Medicago truncatula]
 gi|355494717|gb|AES75920.1| Ubiquitin-like protein [Medicago truncatula]
          Length = 245

 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 66/184 (35%), Positives = 107/184 (58%), Gaps = 5/184 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 52  MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 110

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 111 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 169

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 170 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 229

Query: 239 KDKL 242
           K K+
Sbjct: 230 KAKI 233



 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 58/145 (40%), Positives = 88/145 (60%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TLA Y+
Sbjct: 53  QIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLADYN 111

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+
Sbjct: 112 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 171

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F  +QLED R LA Y I  ES ++L
Sbjct: 172 FAGKQLEDGRTLADYNIQKESTLHL 196



 Score = 90.1 bits (222), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 61/172 (35%), Positives = 98/172 (56%), Gaps = 7/172 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 66  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 123

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 124 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 182

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVE 168
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++
Sbjct: 183 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 234



 Score = 65.5 bits (158), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 35/70 (50%), Positives = 44/70 (62%)

Query: 212 KHSIFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASY 271
           K  IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+F  +QLED R LA Y
Sbjct: 51  KMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 110

Query: 272 KIVNESIVNL 281
            I  ES ++L
Sbjct: 111 NIQKESTLHL 120



 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/102 (38%), Positives = 61/102 (59%), Gaps = 6/102 (5%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 142 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 199

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIP 99
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP
Sbjct: 200 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIP 240


>gi|226473064|emb|CAX71218.1| polyubiquitin [Schistosoma japonicum]
          Length = 194

 Score = 97.8 bits (242), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 65/181 (35%), Positives = 105/181 (58%), Gaps = 5/181 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178

Query: 239 K 239
           K
Sbjct: 179 K 179



 Score = 91.7 bits (226), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 56/145 (38%), Positives = 88/145 (60%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TL+ Y+
Sbjct: 2   QIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F  +QLED R L+ Y I  ES ++L
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHL 145



 Score = 90.5 bits (223), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 65/179 (36%), Positives = 99/179 (55%), Gaps = 7/179 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIP 175
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK      R  +P
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKVRSRIRRESLP 190


>gi|343485961|dbj|BAK61738.1| ubiquitin [Larcopyle butschlii]
          Length = 188

 Score = 97.8 bits (242), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 64/184 (34%), Positives = 105/184 (57%), Gaps = 5/184 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L    SDTI N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLDVESSDTISNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVESSDTISNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I L+V   DT+ +V
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVESSDTISNV 178

Query: 239 KDKL 242
           K K+
Sbjct: 179 KAKI 182



 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 56/145 (38%), Positives = 88/145 (60%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP +   L   G+QL++ +TLA Y+
Sbjct: 2   QIFVKTLTGKTITLDVESSDTISNVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    IFVK L G+ I L+V   DT+ +VK K+  + G  PD QRL+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVESSDTISNVKAKIQDKEGIPPDQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F  +QLED R LA Y I  ES ++L
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHL 145



 Score = 87.4 bits (215), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 60/172 (34%), Positives = 94/172 (54%), Gaps = 7/172 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ I  +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LDVESSDTISNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L    SDTI N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLDVESSDTISNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVE 168
           L   NI  E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK  ++
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVESSDTISNVKAKIQ 183



 Score = 57.4 bits (137), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 38/101 (37%), Positives = 56/101 (55%), Gaps = 6/101 (5%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ I  +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 91  LDVESSDTISNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGI 98
             G M+++ KT +  KT  L    SDTI N+K  I+ +EGI
Sbjct: 149 LRGGMQIFVKTLTG-KTITLDVESSDTISNVKAKIQDKEGI 188


>gi|325302604|tpg|DAA34466.1| TPA_exp: ubiquitin [Amblyomma variegatum]
          Length = 194

 Score = 97.4 bits (241), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 66/184 (35%), Positives = 106/184 (57%), Gaps = 5/184 (2%)

Query: 59  SGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITL 118
           S  M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL
Sbjct: 13  SVTMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 71

Query: 119 DVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSE 177
              NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +
Sbjct: 72  SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPD 130

Query: 178 DCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTV 235
              L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+
Sbjct: 131 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTI 190

Query: 236 RDVK 239
            +VK
Sbjct: 191 ENVK 194



 Score = 90.5 bits (223), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 56/145 (38%), Positives = 88/145 (60%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TL+ Y+
Sbjct: 17  QIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYN 75

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+
Sbjct: 76  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 135

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F  +QLED R L+ Y I  ES ++L
Sbjct: 136 FAGKQLEDGRTLSDYNIQKESTLHL 160



 Score = 90.1 bits (222), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 63/168 (37%), Positives = 96/168 (57%), Gaps = 7/168 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 30  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 87

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 88  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 146

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVK 164
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK
Sbjct: 147 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVK 194



 Score = 67.4 bits (163), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 36/77 (46%), Positives = 48/77 (62%)

Query: 205 LQIIRHVKHSIFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLED 264
           L++ R V   IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+F  +QLED
Sbjct: 8   LRLKRSVTMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 67

Query: 265 DRNLASYKIVNESIVNL 281
            R L+ Y I  ES ++L
Sbjct: 68  GRTLSDYNIQKESTLHL 84


>gi|10121776|gb|AAG13367.1| polyprotein [bovine viral diarrhea virus type 2]
          Length = 636

 Score = 97.1 bits (240), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 110/206 (53%), Gaps = 4/206 (1%)

Query: 79  ANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMISVPKEL 138
            N    + +++ +  V  GIP  +  + + GK +E   TL   NI  E TL ++   +  
Sbjct: 295 GNLGAEVGDLEHLGWVLRGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 354

Query: 139 QEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYY 197
            +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TL+ Y
Sbjct: 355 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQRLILAGKQLEDGRTLSAY 413

Query: 198 DIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRL 255
            I++   L +   ++    IFVK L G+ I LEV   DT+ +VK K+  + G  P  +RL
Sbjct: 414 KIQKESTLYLGLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPGQKRL 473

Query: 256 VFKRQQLEDDRNLASYKIVNESIVNL 281
           +F   + ED R L+ Y I  ES ++L
Sbjct: 474 IFPANKREDARTLSDYNIQKESTLHL 499



 Score = 83.2 bits (204), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 62/188 (32%), Positives = 100/188 (53%), Gaps = 6/188 (3%)

Query: 24  ILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---NDSGVMKLYFKTPSNEKTFELKAN 80
           I  D   L +AG+QLE+G T+ DY I   S +H      G M+++ KT +  KT  L+  
Sbjct: 314 IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG-KTITLEVE 372

Query: 81  RSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMISVPKELQE 140
            SDTIEN+K  I+ +EGIP  +  +   GK +E   TL    I  E TL +    +   +
Sbjct: 373 PSDTIENVKAKIQDKEGIPPDQQRLILAGKQLEDGRTLSAYKIQKESTLYLGLRLRGGMQ 432

Query: 141 IFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDI 199
           IFV+T T  T+ LEV  + T+ +VK  ++      P +   +F   ++ ++ +TL+ Y+I
Sbjct: 433 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPGQKRLIFPANKR-EDARTLSDYNI 491

Query: 200 KENEVLQI 207
           ++   L +
Sbjct: 492 QKESTLHL 499



 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 47/134 (35%), Positives = 71/134 (52%), Gaps = 6/134 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIHND-- 58
           ++V+ ++ IE +K +I  K  E I  D   L  AG+QLE+G T+  Y I   S ++    
Sbjct: 369 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLILAGKQLEDGRTLSAYKIQKESTLYLGLR 426

Query: 59  -SGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + +     E   T
Sbjct: 427 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPGQKRLIFPANKREDART 485

Query: 118 LDVLNINNEDTLQM 131
           L   NI  E TL +
Sbjct: 486 LSDYNIQKESTLHL 499


>gi|1107481|emb|CAA60629.1| unnamed protein product [Acanthamoeba sp. 4b3]
          Length = 172

 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 58/145 (40%), Positives = 89/145 (61%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + T+ +VK+ ++  +  IP +   L   G+QL++ +TLA Y+
Sbjct: 2   QIFVKTLTGKTITLEVESSDTIENVKQKIQD-KEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F  +QLED R LA Y I  ES ++L
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHL 145



 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 62/171 (36%), Positives = 100/171 (58%), Gaps = 5/171 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK+ ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKQKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEV 229
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEV 169



 Score = 85.9 bits (211), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 60/161 (37%), Positives = 91/161 (56%), Gaps = 7/161 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIENVKQKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRA 157
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  +
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESS 172


>gi|440792566|gb|ELR13775.1| polyubiquitin, putative [Acanthamoeba castellanii str. Neff]
          Length = 153

 Score = 95.9 bits (237), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 58/145 (40%), Positives = 89/145 (61%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + T+ +VK+ ++  +  IP +   L   G+QL++ +TLA Y+
Sbjct: 2   QIFVKTLTGKTITLEVESSDTIENVKQKIQD-KEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F  +QLED R LA Y I  ES ++L
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHL 145



 Score = 80.5 bits (197), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 52/152 (34%), Positives = 89/152 (58%), Gaps = 3/152 (1%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK+ ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKQKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           L   G+QL++ +TLA Y+I++   L ++  ++
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 150



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 51/135 (37%), Positives = 77/135 (57%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIENVKQKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMI 132
           L   NI  E TL ++
Sbjct: 132 LADYNIQKESTLHLV 146


>gi|197129059|gb|ACH45557.1| putative ubiquitin C variant 4 [Taeniopygia guttata]
          Length = 190

 Score = 95.9 bits (237), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 67/196 (34%), Positives = 107/196 (54%), Gaps = 12/196 (6%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+   
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIEXC 178

Query: 239 KDKLFREIGQAPDSQR 254
           +       GQ P   R
Sbjct: 179 Q-------GQDPGQGR 187



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 56/145 (38%), Positives = 88/145 (60%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TL+ Y+
Sbjct: 2   QIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F  +QLED R L+ Y I  ES ++L
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHL 145



 Score = 88.2 bits (217), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 61/164 (37%), Positives = 93/164 (56%), Gaps = 7/164 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTV 160
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTI 175


>gi|37542506|gb|AAL25813.1| polyubiquitin, partial [Prunus avium]
          Length = 154

 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 58/145 (40%), Positives = 88/145 (60%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TLA Y+
Sbjct: 3   QIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLADYN 61

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+
Sbjct: 62  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGTPPDQQRLI 121

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F  +QLED R LA Y I  ES ++L
Sbjct: 122 FAGKQLEDGRTLADYNIQEESTLHL 146



 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 51/154 (33%), Positives = 87/154 (56%), Gaps = 3/154 (1%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 2   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 60

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++      P +   
Sbjct: 61  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGTPPDQQRL 120

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
           +F  G+QL++ +TLA Y+I+E   L ++  ++  
Sbjct: 121 IF-AGKQLEDGRTLADYNIQEESTLHLVLRLRGG 153



 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 48/135 (35%), Positives = 76/135 (56%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 16  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 73

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EG P  +  + + GK +E   T
Sbjct: 74  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGTPPDQQRLIFAGKQLEDGRT 132

Query: 118 LDVLNINNEDTLQMI 132
           L   NI  E TL ++
Sbjct: 133 LADYNIQEESTLHLV 147


>gi|159486707|ref|XP_001701379.1| bi-ubiquitin, major isoform [Chlamydomonas reinhardtii]
 gi|158271681|gb|EDO97495.1| bi-ubiquitin, major isoform [Chlamydomonas reinhardtii]
          Length = 153

 Score = 95.1 bits (235), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 58/145 (40%), Positives = 88/145 (60%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TLA Y+
Sbjct: 2   QIFVKTLTGKTITLEVESSDTIENVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F  +QLED R LA Y I  ES ++L
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHL 145



 Score = 80.5 bits (197), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 52/152 (34%), Positives = 88/152 (57%), Gaps = 3/152 (1%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           L   G+QL++ +TLA Y+I++   L ++  ++
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 150



 Score = 80.5 bits (197), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 51/135 (37%), Positives = 77/135 (57%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMI 132
           L   NI  E TL ++
Sbjct: 132 LADYNIQKESTLHLV 146


>gi|302851086|ref|XP_002957068.1| polyubiquitin [Volvox carteri f. nagariensis]
 gi|300257624|gb|EFJ41870.1| polyubiquitin [Volvox carteri f. nagariensis]
          Length = 153

 Score = 94.7 bits (234), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 58/145 (40%), Positives = 88/145 (60%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TLA Y+
Sbjct: 2   QIFVKTLTGKTITLEVESSDTIENVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F  +QLED R LA Y I  ES ++L
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHL 145



 Score = 80.9 bits (198), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 52/155 (33%), Positives = 89/155 (57%), Gaps = 3/155 (1%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSI 215
           L   G+QL++ +TLA Y+I++   L ++  ++  +
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGL 153



 Score = 80.1 bits (196), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 51/135 (37%), Positives = 77/135 (57%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMI 132
           L   NI  E TL ++
Sbjct: 132 LADYNIQKESTLHLV 146


>gi|123718340|emb|CAL30085.1| polyubiquitin [Globodera pallida]
          Length = 154

 Score = 94.7 bits (234), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 58/145 (40%), Positives = 88/145 (60%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TLA Y+
Sbjct: 2   QIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F  +QLED R LA Y I  ES ++L
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHL 145



 Score = 80.5 bits (197), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 52/154 (33%), Positives = 88/154 (57%), Gaps = 3/154 (1%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
           L   G+QL++ +TLA Y+I++   L ++  ++  
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 152



 Score = 79.7 bits (195), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 51/135 (37%), Positives = 77/135 (57%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMI 132
           L   NI  E TL ++
Sbjct: 132 LADYNIQKESTLHLV 146


>gi|291229072|ref|XP_002734500.1| PREDICTED: ubiquitin C-like [Saccoglossus kowalevskii]
          Length = 877

 Score = 94.7 bits (234), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 63/218 (28%), Positives = 118/218 (54%), Gaps = 9/218 (4%)

Query: 68  TPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNED 127
           TP   + F L+  +S T+++IK +++ REGIP      YY GKL++ + TL   N+ ++ 
Sbjct: 445 TPQKFRPFSLRIRKSKTVDDIKEMVKRREGIPSEWQQFYYNGKLLKDHFTLREQNVYDQS 504

Query: 128 TLQM-ISVPKELQEIFVQT---PTSTVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFR 183
            + + + VP+ +  + ++T    T  +  E+    T+  VK  +   +  IP     L  
Sbjct: 505 KVDLKLEVPEGVLPLIIKTVDDDTHVIAAEME--DTIAAVKARIYD-KEGIPPHQIRLVH 561

Query: 184 GGEQLQNLKTLAYYDIKENEVLQIIRHVKHSIFVKLLNGRYIILEVAKFDTVRDVKDKLF 243
           GG  L N +TL  Y I+    L ++  ++++I V+    + I L+V + D+++ +K  + 
Sbjct: 562 GGINLDNNRTLREYGIESASTLHMV--MRYNIMVRSFKDKTISLQVGEADSIKKIKMLVN 619

Query: 244 REIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
            ++G AP+ QR+VF  + LE+ + LA Y I   S+++L
Sbjct: 620 EKLGIAPEMQRIVFSGKVLENSKCLADYHIWENSVLSL 657



 Score = 42.7 bits (99), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 60/125 (48%), Gaps = 6/125 (4%)

Query: 9   IEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIHNDSGVMKLYFKT 68
           I  +K RI+ K  E I      L + G  L+N  T+ +YGI + S +H    VM+     
Sbjct: 539 IAAVKARIYDK--EGIPPHQIRLVHGGINLDNNRTLREYGIESASTLHM---VMRYNIMV 593

Query: 69  PS-NEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNED 127
            S  +KT  L+   +D+I+ IK ++  + GI      I + GK++E+   L   +I    
Sbjct: 594 RSFKDKTISLQVGEADSIKKIKMLVNEKLGIAPEMQRIVFSGKVLENSKCLADYHIWENS 653

Query: 128 TLQMI 132
            L ++
Sbjct: 654 VLSLV 658


>gi|348537407|ref|XP_003456186.1| PREDICTED: polyubiquitin-C-like [Oreochromis niloticus]
          Length = 237

 Score = 94.7 bits (234), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 78/250 (31%), Positives = 122/250 (48%), Gaps = 51/250 (20%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIP------------------VHEY 103
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP                  + +Y
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 104 DI---------YYGGKLIESYITLDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLE 153
           +I          + GK +E   TL   NI  E TL ++   +E  +IFV+T T  T+ LE
Sbjct: 60  NIQKESTLHLVLFAGKQLEDGRTLSDYNIQKESTLHLVLRLRENMQIFVKTLTGKTITLE 119

Query: 154 VRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKH 213
           V  + T+ +VK  ++  +  IP +   L   G+QL++ +TL+ Y+I++   L ++  ++ 
Sbjct: 120 VEPSDTIENVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRG 178

Query: 214 S--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASY 271
              IFVK L G+ I LEV   DT+ +   K                   QLED R L+ Y
Sbjct: 179 GMQIFVKTLTGKTITLEVEPSDTIENXAGK-------------------QLEDGRTLSDY 219

Query: 272 KIVNESIVNL 281
            I  ES ++L
Sbjct: 220 NIQKESTLHL 229



 Score = 80.9 bits (198), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 71/243 (29%), Positives = 116/243 (47%), Gaps = 54/243 (22%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---- 56
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLF 72

Query: 57  -----------NDSGV---------------MKLYFKTPSNEKTFELKANRSDTIENIKF 90
                      +D  +               M+++ KT +  KT  L+   SDTIEN+K 
Sbjct: 73  AGKQLEDGRTLSDYNIQKESTLHLVLRLRENMQIFVKTLTG-KTITLEVEPSDTIENVKA 131

Query: 91  IIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEIFVQTPTS-T 149
            I+ +EGIP  +  + + GK +E   TL   NI  E TL ++   +   +IFV+T T  T
Sbjct: 132 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 191

Query: 150 VKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIR 209
           + LEV                    PS+  E    G+QL++ +TL+ Y+I++   L ++ 
Sbjct: 192 ITLEVE-------------------PSDTIE-NXAGKQLEDGRTLSDYNIQKESTLHLVL 231

Query: 210 HVK 212
            ++
Sbjct: 232 RLR 234


>gi|397614491|gb|EJK62831.1| hypothetical protein THAOC_16543 [Thalassiosira oceanica]
          Length = 240

 Score = 94.4 bits (233), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 65/194 (33%), Positives = 105/194 (54%), Gaps = 13/194 (6%)

Query: 99  PVHEYDIYYGGKLIESYITLDVLNINNED--------TLQMISVPKELQEIFVQTPTS-T 149
           P H  +  +G + I    T D     +ED        T   ++VP    +IFV+T T  T
Sbjct: 41  PHHRRNTIHGRRPIR-LGTRDAFGRRDEDQAILIHSCTTTKLTVPTPFLQIFVKTLTGKT 99

Query: 150 VKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIR 209
           + L+V  + T+ +VK  ++  +  IP +   L   G+QL++ +TL+ Y+I++   L ++ 
Sbjct: 100 ITLDVEPSDTIDNVKTKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 158

Query: 210 HVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRN 267
            ++    IFVK L G+ I L+V   DT+ +VK K+  + G  PD QRL+F  +QLED R 
Sbjct: 159 RLRGGMQIFVKTLTGKTITLDVEPSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 218

Query: 268 LASYKIVNESIVNL 281
           L+ Y I  ES ++L
Sbjct: 219 LSDYNIQKESTLHL 232



 Score = 75.5 bits (184), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 49/135 (36%), Positives = 75/135 (55%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 102 LDVEPSDTIDNVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 159

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L    SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 160 LRGGMQIFVKTLTG-KTITLDVEPSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 218

Query: 118 LDVLNINNEDTLQMI 132
           L   NI  E TL ++
Sbjct: 219 LSDYNIQKESTLHLV 233



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 48/148 (32%), Positives = 85/148 (57%), Gaps = 3/148 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           ++++ KT +  KT  L    SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 88  LQIFVKTLTG-KTITLDVEPSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 146

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP +   
Sbjct: 147 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDNVKTKIQD-KEGIPPDQQR 205

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQII 208
           L   G+QL++ +TL+ Y+I++   L ++
Sbjct: 206 LIFAGKQLEDGRTLSDYNIQKESTLHLV 233


>gi|73747822|gb|AAZ82816.1| ubiquitin monomer protein [Morus mongolica]
          Length = 152

 Score = 94.4 bits (233), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 58/145 (40%), Positives = 88/145 (60%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TLA Y+
Sbjct: 2   QIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F  +QLED R LA Y I  ES ++L
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHL 145



 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 51/148 (34%), Positives = 86/148 (58%), Gaps = 3/148 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQII 208
           L   G+QL++ +TLA Y+I++   L ++
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLV 146



 Score = 77.4 bits (189), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 49/135 (36%), Positives = 77/135 (57%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMI 132
           L   NI  E TL ++
Sbjct: 132 LADYNIQKESTLHLV 146


>gi|21554192|gb|AAM63271.1| unknown [Arabidopsis thaliana]
          Length = 154

 Score = 94.4 bits (233), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 58/145 (40%), Positives = 88/145 (60%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TLA Y+
Sbjct: 2   QIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQXLIFAGKQLEDGRTLADYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F  +QLED R LA Y I  ES ++L
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHL 145



 Score = 81.3 bits (199), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 52/156 (33%), Positives = 89/156 (57%), Gaps = 3/156 (1%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQXLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSIF 216
           L   G+QL++ +TLA Y+I++   L ++  ++   F
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGSF 154



 Score = 77.0 bits (188), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 49/135 (36%), Positives = 77/135 (57%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQXLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMI 132
           L   NI  E TL ++
Sbjct: 132 LADYNIQKESTLHLV 146


>gi|413926514|gb|AFW66446.1| ubiquitin2 [Zea mays]
 gi|413935669|gb|AFW70220.1| polyubiquitin-like protein [Zea mays]
          Length = 153

 Score = 94.4 bits (233), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 58/145 (40%), Positives = 88/145 (60%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TLA Y+
Sbjct: 2   QIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F  +QLED R LA Y I  ES ++L
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHL 145



 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 51/152 (33%), Positives = 88/152 (57%), Gaps = 3/152 (1%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           L   G+QL++ +TLA Y+I++   L ++  ++
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 150



 Score = 77.8 bits (190), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 49/135 (36%), Positives = 77/135 (57%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMI 132
           L   NI  E TL ++
Sbjct: 132 LADYNIQKESTLHLV 146


>gi|319996466|dbj|BAJ61942.1| ubiquitin [Nymphaea hybrid cultivar]
          Length = 146

 Score = 94.4 bits (233), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 58/146 (39%), Positives = 87/146 (59%), Gaps = 4/146 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TLA Y+
Sbjct: 2   QIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNLT 282
           F  +QLED R LA Y I  ES   L+
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTSTLS 146



 Score = 75.9 bits (185), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 50/141 (35%), Positives = 83/141 (58%), Gaps = 3/141 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKE 201
           L   G+QL++ +TLA Y+I++
Sbjct: 119 LIFAGKQLEDGRTLADYNIQK 139



 Score = 74.3 bits (181), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 48/131 (36%), Positives = 74/131 (56%), Gaps = 6/131 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDT 128
           L   NI  E T
Sbjct: 132 LADYNIQKEST 142


>gi|334186377|ref|NP_001190681.1| ubiquitin 11 [Arabidopsis thaliana]
 gi|357512383|ref|XP_003626480.1| Ubiquitin-like protein [Medicago truncatula]
 gi|40287484|gb|AAR83856.1| hexameric polyubiquitin 6PU11 [Capsicum annuum]
 gi|147802377|emb|CAN77120.1| hypothetical protein VITISV_031666 [Vitis vinifera]
 gi|217074820|gb|ACJ85770.1| unknown [Medicago truncatula]
 gi|332657071|gb|AEE82471.1| ubiquitin 11 [Arabidopsis thaliana]
 gi|355501495|gb|AES82698.1| Ubiquitin-like protein [Medicago truncatula]
 gi|388491722|gb|AFK33927.1| unknown [Medicago truncatula]
 gi|388492650|gb|AFK34391.1| unknown [Lotus japonicus]
 gi|399513944|gb|AFP43342.1| polyubiquitin [Arabidopsis thaliana]
          Length = 153

 Score = 94.4 bits (233), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 58/145 (40%), Positives = 88/145 (60%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TLA Y+
Sbjct: 2   QIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F  +QLED R LA Y I  ES ++L
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHL 145



 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 51/152 (33%), Positives = 88/152 (57%), Gaps = 3/152 (1%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           L   G+QL++ +TLA Y+I++   L ++  ++
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 150



 Score = 77.4 bits (189), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 49/135 (36%), Positives = 77/135 (57%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMI 132
           L   NI  E TL ++
Sbjct: 132 LADYNIQKESTLHLV 146


>gi|384371341|gb|ABF06579.2| polyubiquitin, partial [Gladiolus grandiflorus]
          Length = 162

 Score = 94.4 bits (233), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 58/145 (40%), Positives = 88/145 (60%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TLA Y+
Sbjct: 2   QIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F  +QLED R LA Y I  ES ++L
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHL 145



 Score = 85.5 bits (210), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 57/164 (34%), Positives = 94/164 (57%), Gaps = 5/164 (3%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNG 222
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 162



 Score = 82.0 bits (201), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 54/151 (35%), Positives = 85/151 (56%), Gaps = 6/151 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS 148
           L   NI  E TL ++   +   +IFV+T T 
Sbjct: 132 LADYNIQKESTLHLVLRLRGGMQIFVKTLTG 162


>gi|323457057|gb|EGB12923.1| ubiquitin [Aureococcus anophagefferens]
          Length = 250

 Score = 93.6 bits (231), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 74/238 (31%), Positives = 117/238 (49%), Gaps = 20/238 (8%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  K   L  +  DTI N+K  IE +EGIP     + + G+ +E   TL   
Sbjct: 1   MQIFIKTLTG-KIITLDVDPPDTIANVKQKIEDKEGIPPDRQRLIFCGRQLEDGPTLIDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  + TL ++       +IFV+T T  T+ L+V  + T+ +VK+ ++     IPS+   
Sbjct: 60  NIQKQSTLHLVLRLGGPPQIFVKTLTGKTITLDVEPSDTIGNVKQKIQDKE-GIPSDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHV-----------------KHSIFVKLLNGR 223
           L   G+Q ++ +TL+   I     L ++  +                    I VK L G+
Sbjct: 119 LIFKGKQFEDGRTLSDCSILNYSTLHLVLRLLKEPEREPESEPEPESELEQIVVKTLTGK 178

Query: 224 YIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
            I L V   DT+ +VK K+  + G  PD QRL+FK +Q ED   L+   I N+S  +L
Sbjct: 179 TITLVVEPSDTIGNVKQKIQDKEGIPPDQQRLIFKGKQFEDGLTLSDCNIPNKSTFHL 236



 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 108/227 (47%), Gaps = 23/227 (10%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V   + I  +K +I  K  E I  D   L + G+QLE+G T+IDY I   S +H    
Sbjct: 15  LDVDPPDTIANVKQKIEDK--EGIPPDRQRLIFCGRQLEDGPTLIDYNIQKQSTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G  +++ KT +  KT  L    SDTI N+K  I+ +EGIP  +  + + GK  E   T
Sbjct: 73  LGGPPQIFVKTLTG-KTITLDVEPSDTIGNVKQKIQDKEGIPSDQQRLIFKGKQFEDGRT 131

Query: 118 LDVLNINNEDTLQMI---------------SVPKELQEIFVQTPTS-TVKLEVRRAHTVL 161
           L   +I N  TL ++                   EL++I V+T T  T+ L V  + T+ 
Sbjct: 132 LSDCSILNYSTLHLVLRLLKEPEREPESEPEPESELEQIVVKTLTGKTITLVVEPSDTIG 191

Query: 162 DVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQII 208
           +VK+ ++  +  IP +   L   G+Q ++  TL+  +I       ++
Sbjct: 192 NVKQKIQD-KEGIPPDQQRLIFKGKQFEDGLTLSDCNIPNKSTFHLV 237


>gi|440789929|gb|ELR11220.1| ubiquitin domain containing protein [Acanthamoeba castellanii str.
           Neff]
          Length = 224

 Score = 93.6 bits (231), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 58/145 (40%), Positives = 88/145 (60%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + T+ +VK+ ++     IP +   L   G+QL++ +TLA Y+
Sbjct: 2   QIFVKTLTGKTITLEVESSDTIENVKQKIQDKEG-IPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F  +QLED R LA Y I  ES ++L
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHL 145



 Score = 80.1 bits (196), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 51/135 (37%), Positives = 77/135 (57%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIENVKQKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMI 132
           L   NI  E TL ++
Sbjct: 132 LADYNIQKESTLHLV 146



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 52/148 (35%), Positives = 86/148 (58%), Gaps = 3/148 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK+ ++     IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKQKIQDKEG-IPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQII 208
           L   G+QL++ +TLA Y+I++   L ++
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLV 146


>gi|82622379|gb|ABB86777.1| unknown [Theileria lestoquardi]
          Length = 159

 Score = 93.6 bits (231), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 57/145 (39%), Positives = 88/145 (60%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TL+ Y+
Sbjct: 2   QIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  E G  PD QRL+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDEEGIPPDQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F  +QLED R L+ Y I  ES ++L
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHL 145



 Score = 78.2 bits (191), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 51/135 (37%), Positives = 76/135 (56%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+  EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDEEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMI 132
           L   NI  E TL ++
Sbjct: 132 LSDYNIQKESTLHLV 146



 Score = 77.8 bits (190), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 51/152 (33%), Positives = 87/152 (57%), Gaps = 3/152 (1%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++     IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDEE-GIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150


>gi|242074418|ref|XP_002447145.1| hypothetical protein SORBIDRAFT_06g029360 [Sorghum bicolor]
 gi|241938328|gb|EES11473.1| hypothetical protein SORBIDRAFT_06g029360 [Sorghum bicolor]
          Length = 153

 Score = 93.6 bits (231), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 58/145 (40%), Positives = 87/145 (60%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL + +TLA Y+
Sbjct: 2   QIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQRLIFAGKQLDDGRTLADYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKSITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F  +QLED R LA Y I  ES ++L
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHL 145



 Score = 76.6 bits (187), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 88/152 (57%), Gaps = 3/152 (1%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK ++   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLDDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  ++ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKSITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           L   G+QL++ +TLA Y+I++   L ++  ++
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 150



 Score = 75.1 bits (183), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 47/135 (34%), Positives = 77/135 (57%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QL++G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLDDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  K+  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KSITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMI 132
           L   NI  E TL ++
Sbjct: 132 LADYNIQKESTLHLV 146


>gi|61889379|emb|CAI51312.2| polyubiquitin [Capsicum chinense]
          Length = 153

 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 58/145 (40%), Positives = 87/145 (60%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TLA Y+
Sbjct: 2   QIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++   +    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+
Sbjct: 61  IQKESTLHLVLRFRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F  +QLED R LA Y I  ES ++L
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHL 145



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 51/152 (33%), Positives = 88/152 (57%), Gaps = 3/152 (1%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRFRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           L   G+QL++ +TLA Y+I++   L ++  ++
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 150



 Score = 77.4 bits (189), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 49/135 (36%), Positives = 77/135 (57%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  FRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMI 132
           L   NI  E TL ++
Sbjct: 132 LADYNIQKESTLHLV 146


>gi|408776165|gb|AFU90137.1| polyubiquitin, partial [Paeonia lactiflora]
          Length = 169

 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 60/164 (36%), Positives = 96/164 (58%), Gaps = 4/164 (2%)

Query: 82  SDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEI 141
           SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   NI  E TL ++   +   +I
Sbjct: 1   SDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQI 60

Query: 142 FVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIK 200
           FV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TLA Y+I+
Sbjct: 61  FVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 119

Query: 201 ENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKL 242
           +   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+
Sbjct: 120 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKI 163



 Score = 88.2 bits (217), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 60/167 (35%), Positives = 94/167 (56%), Gaps = 7/167 (4%)

Query: 6   TEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---NDSGVM 62
           ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H      G M
Sbjct: 1   SDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGM 58

Query: 63  KLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLN 122
           +++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   N
Sbjct: 59  QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 117

Query: 123 INNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVE 168
           I  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++
Sbjct: 118 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 164



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 49/127 (38%), Positives = 76/127 (59%), Gaps = 3/127 (2%)

Query: 157 AHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS-- 214
           + T+ +VK  ++  +  IP +   L   G+QL++ +TLA Y+I++   L ++  ++    
Sbjct: 1   SDTIDNVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQ 59

Query: 215 IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIV 274
           IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+F  +QLED R LA Y I 
Sbjct: 60  IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 119

Query: 275 NESIVNL 281
            ES ++L
Sbjct: 120 KESTLHL 126


>gi|567767|gb|AAA53067.1| p125 protein, partial [Bovine viral diarrhea virus 1]
          Length = 1054

 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 59/162 (36%), Positives = 95/162 (58%), Gaps = 4/162 (2%)

Query: 123 INNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCEL 181
           +  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L
Sbjct: 331 LRKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQRL 389

Query: 182 FRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVK 239
              G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK
Sbjct: 390 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVK 449

Query: 240 DKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
            K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 450 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 491



 Score = 77.4 bits (189), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 52/150 (34%), Positives = 87/150 (58%), Gaps = 3/150 (2%)

Query: 60  GVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLD 119
           G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL 
Sbjct: 345 GGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLS 403

Query: 120 VLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSED 178
             NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP + 
Sbjct: 404 DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQ 462

Query: 179 CELFRGGEQLQNLKTLAYYDIKENEVLQII 208
             L   G+QL++ +TL+ Y+I++   L ++
Sbjct: 463 QRLIFAGKQLEDGRTLSDYNIQKESTLHLV 492



 Score = 77.0 bits (188), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 51/135 (37%), Positives = 77/135 (57%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 361 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 418

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 419 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 477

Query: 118 LDVLNINNEDTLQMI 132
           L   NI  E TL ++
Sbjct: 478 LSDYNIQKESTLHLV 492



 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 39/98 (39%), Positives = 58/98 (59%), Gaps = 1/98 (1%)

Query: 185 GEQLQNLKTLAYYDIKENEVLQIIR-HVKHSIFVKLLNGRYIILEVAKFDTVRDVKDKLF 243
           G ++ +L+ L +   KE+ +  ++R      IFVK L G+ I LEV   DT+ +VK K+ 
Sbjct: 318 GAEIGDLEHLGWVLRKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQ 377

Query: 244 REIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
            + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 378 DKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 415


>gi|82568440|dbj|BAE48510.1| polyubiquitin [Raphidiophrys contractilis]
          Length = 173

 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 59/170 (34%), Positives = 98/170 (57%), Gaps = 4/170 (2%)

Query: 73  KTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMI 132
           KT  L+   SD+IEN+K  I+ +EGIP  +  + + GK +E   TL   NI  E TL ++
Sbjct: 4   KTITLEVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 63

Query: 133 SVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNL 191
              +   +IFV+T T  T+ LEV  + ++ +VK  ++  +  IP +   L   G+QL++ 
Sbjct: 64  LRLRGGMQIFVKTLTGKTITLEVESSDSIENVKAKIQD-KEGIPPDQQRLIFAGKQLEDG 122

Query: 192 KTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVK 239
           +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   D++ +VK
Sbjct: 123 RTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDSIENVK 172



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 61/168 (36%), Positives = 96/168 (57%), Gaps = 7/168 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 8   LEVESSDSIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 65

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SD+IEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 66  LRGGMQIFVKTLTG-KTITLEVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 124

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVK 164
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + ++ +VK
Sbjct: 125 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDSIENVK 172



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 49/135 (36%), Positives = 81/135 (60%), Gaps = 3/135 (2%)

Query: 149 TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQII 208
           T+ LEV  + ++ +VK  ++  +  IP +   L   G+QL++ +TL+ Y+I++   L ++
Sbjct: 5   TITLEVESSDSIENVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 63

Query: 209 RHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDR 266
             ++    IFVK L G+ I LEV   D++ +VK K+  + G  PD QRL+F  +QLED R
Sbjct: 64  LRLRGGMQIFVKTLTGKTITLEVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 123

Query: 267 NLASYKIVNESIVNL 281
            L+ Y I  ES ++L
Sbjct: 124 TLSDYNIQKESTLHL 138



 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 28/62 (45%), Positives = 39/62 (62%)

Query: 220 LNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIV 279
           L G+ I LEV   D++ +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES +
Sbjct: 1   LTGKTITLEVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 60

Query: 280 NL 281
           +L
Sbjct: 61  HL 62


>gi|302393789|sp|P62972.2|UBIQP_XENLA RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
           Flags: Precursor
 gi|2118960|pir||I51568 polyubiquitin - African clawed frog (fragment)
 gi|214864|gb|AAA49978.1| polyubiquitin, partial [Xenopus laevis]
          Length = 167

 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 59/159 (37%), Positives = 94/159 (59%), Gaps = 4/159 (2%)

Query: 126 EDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRG 184
           E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   
Sbjct: 3   ESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQRLIFA 61

Query: 185 GEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKL 242
           G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+
Sbjct: 62  GKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 121

Query: 243 FREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
             + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 122 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 160



 Score = 80.1 bits (196), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 52/150 (34%), Positives = 87/150 (58%), Gaps = 3/150 (2%)

Query: 60  GVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLD 119
           G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL 
Sbjct: 14  GGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLS 72

Query: 120 VLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSED 178
             NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP + 
Sbjct: 73  DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQ 131

Query: 179 CELFRGGEQLQNLKTLAYYDIKENEVLQII 208
             L   G+QL++ +TL+ Y+I++   L ++
Sbjct: 132 QRLIFAGKQLEDGRTLSDYNIQKESTLHLV 161



 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 51/135 (37%), Positives = 77/135 (57%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 30  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 87

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 88  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 146

Query: 118 LDVLNINNEDTLQMI 132
           L   NI  E TL ++
Sbjct: 147 LSDYNIQKESTLHLV 161


>gi|283245864|gb|ABH10622.2| ubiquitin [Nicotiana tabacum]
          Length = 143

 Score = 92.8 bits (229), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 57/144 (39%), Positives = 87/144 (60%), Gaps = 4/144 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TLA Y+
Sbjct: 1   QIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLADYN 59

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+
Sbjct: 60  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 119

Query: 257 FKRQQLEDDRNLASYKIVNESIVN 280
           F  +QLED R LA Y I  ES ++
Sbjct: 120 FAGKQLEDGRTLADYNIQKESTLH 143



 Score = 75.9 bits (185), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 49/132 (37%), Positives = 75/132 (56%), Gaps = 6/132 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 14  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 71

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 72  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 130

Query: 118 LDVLNINNEDTL 129
           L   NI  E TL
Sbjct: 131 LADYNIQKESTL 142



 Score = 75.1 bits (183), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 50/144 (34%), Positives = 83/144 (57%), Gaps = 3/144 (2%)

Query: 63  KLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLN 122
           +++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   N
Sbjct: 1   QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 59

Query: 123 INNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCEL 181
           I  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L
Sbjct: 60  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQRL 118

Query: 182 FRGGEQLQNLKTLAYYDIKENEVL 205
              G+QL++ +TLA Y+I++   L
Sbjct: 119 IFAGKQLEDGRTLADYNIQKESTL 142



 Score = 64.3 bits (155), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 34/67 (50%), Positives = 43/67 (64%)

Query: 215 IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIV 274
           IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+F  +QLED R LA Y I 
Sbjct: 2   IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 61

Query: 275 NESIVNL 281
            ES ++L
Sbjct: 62  KESTLHL 68



 Score = 39.7 bits (91), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 21/56 (37%), Positives = 34/56 (60%), Gaps = 2/56 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH 56
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H
Sbjct: 90  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 143


>gi|365759560|gb|EHN01342.1| Ubi4p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
 gi|392297682|gb|EIW08781.1| Ubi4p [Saccharomyces cerevisiae CEN.PK113-7D]
          Length = 153

 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 56/145 (38%), Positives = 88/145 (60%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TL+ Y+
Sbjct: 2   QIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F  +QLED R L+ Y I  ES ++L
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHL 145



 Score = 78.2 bits (191), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 50/152 (32%), Positives = 88/152 (57%), Gaps = 3/152 (1%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150



 Score = 76.6 bits (187), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 49/135 (36%), Positives = 77/135 (57%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMI 132
           L   NI  E TL ++
Sbjct: 132 LSDYNIQKESTLHLV 146


>gi|363756558|ref|XP_003648495.1| hypothetical protein Ecym_8408 [Eremothecium cymbalariae
           DBVPG#7215]
 gi|356891695|gb|AET41678.1| Hypothetical protein Ecym_8408 [Eremothecium cymbalariae
           DBVPG#7215]
          Length = 153

 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 56/145 (38%), Positives = 88/145 (60%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TL+ Y+
Sbjct: 2   QIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F  +QLED R L+ Y I  ES ++L
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHL 145



 Score = 78.2 bits (191), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 50/152 (32%), Positives = 88/152 (57%), Gaps = 3/152 (1%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150



 Score = 77.0 bits (188), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 49/135 (36%), Positives = 77/135 (57%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMI 132
           L   NI  E TL ++
Sbjct: 132 LSDYNIQKESTLHLV 146


>gi|403217874|emb|CCK72367.1| hypothetical protein KNAG_0J02880 [Kazachstania naganishii CBS
           8797]
          Length = 153

 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 56/145 (38%), Positives = 88/145 (60%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TL+ Y+
Sbjct: 2   QIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F  +QLED R L+ Y I  ES ++L
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHL 145



 Score = 78.2 bits (191), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 50/152 (32%), Positives = 88/152 (57%), Gaps = 3/152 (1%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150



 Score = 76.6 bits (187), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 49/135 (36%), Positives = 77/135 (57%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMI 132
           L   NI  E TL ++
Sbjct: 132 LSDYNIQKESTLHLV 146


>gi|54300702|gb|AAV33127.1| ubiquitin C splice variant [Homo sapiens]
          Length = 153

 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 56/145 (38%), Positives = 88/145 (60%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TL+ Y+
Sbjct: 2   QIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F  +QLED R L+ Y I  ES ++L
Sbjct: 121 FAGKQLEDGRTLSGYNIQKESTLHL 145



 Score = 79.7 bits (195), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 51/155 (32%), Positives = 89/155 (57%), Gaps = 3/155 (1%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSI 215
           L   G+QL++ +TL+ Y+I++   L ++  ++  +
Sbjct: 119 LIFAGKQLEDGRTLSGYNIQKESTLHLVLRLRGGV 153



 Score = 79.7 bits (195), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 51/135 (37%), Positives = 77/135 (57%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMI 132
           L   NI  E TL ++
Sbjct: 132 LSGYNIQKESTLHLV 146


>gi|307174680|gb|EFN65063.1| Ubiquitin [Camponotus floridanus]
          Length = 154

 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 56/145 (38%), Positives = 88/145 (60%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TL+ Y+
Sbjct: 2   QIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F  +QLED R L+ Y I  ES ++L
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHL 145



 Score = 79.7 bits (195), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 51/135 (37%), Positives = 77/135 (57%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMI 132
           L   NI  E TL ++
Sbjct: 132 LSDYNIQKESTLHLV 146



 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 51/152 (33%), Positives = 88/152 (57%), Gaps = 3/152 (1%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150


>gi|357120166|ref|XP_003561800.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin-60S ribosomal protein
           L40-like [Brachypodium distachyon]
          Length = 260

 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 75/224 (33%), Positives = 117/224 (52%), Gaps = 31/224 (13%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITL-DV 120
           M+++ KT +  KT  L+   SDT+ N+K  I+ +EGIP  +  + + GK +E   TL D 
Sbjct: 1   MQIFVKTLTG-KTITLEVETSDTVANVKAKIQDKEGIPPEQQRLIFTGKQLEEGDTLADY 59

Query: 121 LNINNEDTLQMISVPKELQEIFVQTPTS--TVKLEVRRAH-TVLDVKKMVESMRICIPSE 177
             I+ E TL ++   +   +IFV++  S  T+ L+V  +  TV  VK  ++ +    P E
Sbjct: 60  GIIHKESTLHLVLRLRGGMQIFVRSICSNKTITLDVLESRDTVGSVKAKIQDVEGVSPGE 119

Query: 178 DCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSIFVKLLNGRYIILEVAKFDTVRD 237
                      Q L+    ++++E +           IFVK L G+ I LEV   DT+ +
Sbjct: 120 -----------QRLR----FEVEEMQ-----------IFVKTLTGKTITLEVESSDTIDN 153

Query: 238 VKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           VK K+  + G  PD QRL+F  +QL+D R LA Y I  ES ++L
Sbjct: 154 VKAKIQDKEGIPPDQQRLIFAGKQLDDGRTLADYNIQKESTLHL 197



 Score = 57.8 bits (138), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 59/219 (26%), Positives = 102/219 (46%), Gaps = 46/219 (21%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIHNDS- 59
           ++V+ ++ +  +K +I  K  E I  +   L + G+QLE G T+ DYGI     IH +S 
Sbjct: 15  LEVETSDTVANVKAKIQDK--EGIPPEQQRLIFTGKQLEEGDTLADYGI-----IHKEST 67

Query: 60  --------GVMKLYFKTPSNEKTFELKANRS-DTIENIKFIIEVREGIPVHEYDIYYGGK 110
                   G M+++ ++  + KT  L    S DT+ ++K  I+  EG+   E        
Sbjct: 68  LHLVLRLRGGMQIFVRSICSNKTITLDVLESRDTVGSVKAKIQDVEGVSPGE-------- 119

Query: 111 LIESYITLDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVES 169
                              Q +    E  +IFV+T T  T+ LEV  + T+ +VK  ++ 
Sbjct: 120 -------------------QRLRFEVEEMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD 160

Query: 170 MRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQII 208
            +  IP +   L   G+QL + +TLA Y+I++   L ++
Sbjct: 161 -KEGIPPDQQRLIFAGKQLDDGRTLADYNIQKESTLHLV 198


>gi|7799051|emb|CAB90826.1| ubiquitin [Cyanidium caldarium]
          Length = 153

 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 56/145 (38%), Positives = 88/145 (60%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TL+ Y+
Sbjct: 2   QIFVKTLTGKTITLEVEPSDTIENVKSKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKSKIQDKEGIPPDQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F  +QLED R L+ Y I  ES ++L
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHL 145



 Score = 78.6 bits (192), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 51/135 (37%), Positives = 77/135 (57%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMI 132
           L   NI  E TL ++
Sbjct: 132 LSDYNIQKESTLHLV 146



 Score = 77.8 bits (190), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 51/152 (33%), Positives = 88/152 (57%), Gaps = 3/152 (1%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKSKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150


>gi|372467011|pdb|3U30|A Chain A, Crystal Structure Of A Linear-Specific Ubiquitin Fab Bound
           To Linear Ubiquitin
 gi|372467014|pdb|3U30|D Chain D, Crystal Structure Of A Linear-Specific Ubiquitin Fab Bound
           To Linear Ubiquitin
          Length = 172

 Score = 92.0 bits (227), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 56/145 (38%), Positives = 88/145 (60%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TL+ Y+
Sbjct: 22  QIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYN 80

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+
Sbjct: 81  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 140

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F  +QLED R L+ Y I  ES ++L
Sbjct: 141 FAGKQLEDGRTLSDYNIQKESTLHL 165



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 51/135 (37%), Positives = 77/135 (57%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 35  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 92

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 93  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 151

Query: 118 LDVLNINNEDTLQMI 132
           L   NI  E TL ++
Sbjct: 152 LSDYNIQKESTLHLV 166



 Score = 78.6 bits (192), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 51/148 (34%), Positives = 86/148 (58%), Gaps = 3/148 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 21  MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 79

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 80  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 138

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQII 208
           L   G+QL++ +TL+ Y+I++   L ++
Sbjct: 139 LIFAGKQLEDGRTLSDYNIQKESTLHLV 166


>gi|225733991|pdb|2ZVN|A Chain A, Nemo Cozi Domain Incomplex With Diubiquitin In P212121
           Space Group
 gi|225733992|pdb|2ZVN|G Chain G, Nemo Cozi Domain Incomplex With Diubiquitin In P212121
           Space Group
 gi|225733995|pdb|2ZVN|C Chain C, Nemo Cozi Domain Incomplex With Diubiquitin In P212121
           Space Group
 gi|225733996|pdb|2ZVN|E Chain E, Nemo Cozi Domain Incomplex With Diubiquitin In P212121
           Space Group
 gi|225733999|pdb|2ZVO|A Chain A, Nemo Cozi Domain In Complex With Diubiquitin In C2 Space
           Group
 gi|225734000|pdb|2ZVO|G Chain G, Nemo Cozi Domain In Complex With Diubiquitin In C2 Space
           Group
 gi|374074071|pdb|3AXC|A Chain A, Crystal Structure Of Linear Diubiquitin
          Length = 154

 Score = 92.0 bits (227), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 56/145 (38%), Positives = 88/145 (60%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TL+ Y+
Sbjct: 4   QIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYN 62

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+
Sbjct: 63  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 122

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F  +QLED R L+ Y I  ES ++L
Sbjct: 123 FAGKQLEDGRTLSDYNIQKESTLHL 147



 Score = 80.5 bits (197), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 52/156 (33%), Positives = 89/156 (57%), Gaps = 3/156 (1%)

Query: 60  GVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLD 119
           G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL 
Sbjct: 1   GSMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLS 59

Query: 120 VLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSED 178
             NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP + 
Sbjct: 60  DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQ 118

Query: 179 CELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
             L   G+QL++ +TL+ Y+I++   L ++  ++  
Sbjct: 119 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 154



 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 51/135 (37%), Positives = 77/135 (57%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 17  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 74

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 75  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 133

Query: 118 LDVLNINNEDTLQMI 132
           L   NI  E TL ++
Sbjct: 134 LSDYNIQKESTLHLV 148


>gi|301617753|ref|XP_002938291.1| PREDICTED: ubiquitin-like [Xenopus (Silurana) tropicalis]
          Length = 153

 Score = 92.0 bits (227), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 56/145 (38%), Positives = 87/145 (60%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ ++LA Y+
Sbjct: 2   QIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQRLIFAGKQLEDCRSLADYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKSKIQDKEGIPPDQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F  +QLED R L  Y I  ES ++L
Sbjct: 121 FAGKQLEDGRTLCDYNIQKESTLHL 145



 Score = 75.9 bits (185), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 50/152 (32%), Positives = 87/152 (57%), Gaps = 3/152 (1%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   +L   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDCRSLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKSKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           L   G+QL++ +TL  Y+I++   L ++  ++
Sbjct: 119 LIFAGKQLEDGRTLCDYNIQKESTLHLVLRLR 150



 Score = 74.3 bits (181), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 49/135 (36%), Positives = 76/135 (56%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+  ++ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDCRSLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMI 132
           L   NI  E TL ++
Sbjct: 132 LCDYNIQKESTLHLV 146


>gi|414865716|tpg|DAA44273.1| TPA: Ubiquitin fusion protein [Zea mays]
          Length = 205

 Score = 92.0 bits (227), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 58/145 (40%), Positives = 88/145 (60%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TLA Y+
Sbjct: 2   QIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F  +QLED R LA Y I  ES ++L
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHL 145



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 52/156 (33%), Positives = 89/156 (57%), Gaps = 3/156 (1%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSIF 216
           L   G+QL++ +TLA Y+I++   L ++  ++  I 
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGII 154



 Score = 77.8 bits (190), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 49/135 (36%), Positives = 77/135 (57%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMI 132
           L   NI  E TL ++
Sbjct: 132 LADYNIQKESTLHLV 146


>gi|4589760|dbj|BAA76889.1| ubiquitin [Trichophyton mentagrophytes]
 gi|6539532|dbj|BAA88168.1| ubiquitin [Arthroderma otae]
          Length = 153

 Score = 92.0 bits (227), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 56/145 (38%), Positives = 88/145 (60%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TL+ Y+
Sbjct: 2   QIFVKTLTGKTITLEVESSDTIDNVKTKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F  +QLED R L+ Y I  ES ++L
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHL 145



 Score = 77.8 bits (190), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 50/152 (32%), Positives = 88/152 (57%), Gaps = 3/152 (1%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150



 Score = 77.4 bits (189), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 49/135 (36%), Positives = 77/135 (57%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMI 132
           L   NI  E TL ++
Sbjct: 132 LSDYNIQKESTLHLV 146


>gi|32400969|gb|AAP80690.1| polyubiquitin [Griffithsia japonica]
          Length = 195

 Score = 92.0 bits (227), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 56/145 (38%), Positives = 88/145 (60%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TL+ Y+
Sbjct: 44  QIFVKTLTGKTITLEVESSDTIENVKTKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYN 102

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+
Sbjct: 103 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKTKIQDKEGIPPDQQRLI 162

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F  +QLED R L+ Y I  ES ++L
Sbjct: 163 FAGKQLEDGRTLSDYNIQKESTLHL 187



 Score = 79.7 bits (195), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 52/149 (34%), Positives = 87/149 (58%), Gaps = 3/149 (2%)

Query: 61  VMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDV 120
           VM+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL  
Sbjct: 42  VMQIFVKTLTG-KTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 100

Query: 121 LNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDC 179
            NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +  
Sbjct: 101 YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKTKIQD-KEGIPPDQQ 159

Query: 180 ELFRGGEQLQNLKTLAYYDIKENEVLQII 208
            L   G+QL++ +TL+ Y+I++   L ++
Sbjct: 160 RLIFAGKQLEDGRTLSDYNIQKESTLHLV 188



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 51/135 (37%), Positives = 77/135 (57%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 57  LEVESSDTIENVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 114

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 115 LRGGMQIFVKTLTG-KTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 173

Query: 118 LDVLNINNEDTLQMI 132
           L   NI  E TL ++
Sbjct: 174 LSDYNIQKESTLHLV 188



 Score = 65.5 bits (158), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 36/78 (46%), Positives = 47/78 (60%), Gaps = 6/78 (7%)

Query: 210 HVKHS------IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLE 263
           H KH+      IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+F  +QLE
Sbjct: 34  HPKHTLFIVMQIFVKTLTGKTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLE 93

Query: 264 DDRNLASYKIVNESIVNL 281
           D R L+ Y I  ES ++L
Sbjct: 94  DGRTLSDYNIQKESTLHL 111


>gi|71033201|ref|XP_766242.1| ubiquitin [Theileria parva strain Muguga]
 gi|68353199|gb|EAN33959.1| ubiquitin, putative [Theileria parva]
          Length = 155

 Score = 92.0 bits (227), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 56/145 (38%), Positives = 88/145 (60%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TL+ Y+
Sbjct: 2   QIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F  +QLED R L+ Y I  ES ++L
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHL 145



 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 51/135 (37%), Positives = 77/135 (57%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMI 132
           L   NI  E TL ++
Sbjct: 132 LSDYNIQKESTLHLV 146



 Score = 78.2 bits (191), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 51/152 (33%), Positives = 88/152 (57%), Gaps = 3/152 (1%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150


>gi|367006115|ref|XP_003687789.1| hypothetical protein TPHA_0K02250 [Tetrapisispora phaffii CBS 4417]
 gi|357526094|emb|CCE65355.1| hypothetical protein TPHA_0K02250 [Tetrapisispora phaffii CBS 4417]
          Length = 153

 Score = 91.7 bits (226), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 56/145 (38%), Positives = 88/145 (60%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TL+ Y+
Sbjct: 2   QIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F  +QLED R L+ Y I  ES ++L
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHL 145



 Score = 77.8 bits (190), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 50/152 (32%), Positives = 88/152 (57%), Gaps = 3/152 (1%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150



 Score = 77.0 bits (188), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 49/135 (36%), Positives = 77/135 (57%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMI 132
           L   NI  E TL ++
Sbjct: 132 LSDYNIQKESTLHLV 146


>gi|228311825|pdb|2W9N|A Chain A, Crystal Structure Of Linear Di-Ubiquitin
          Length = 152

 Score = 91.7 bits (226), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 56/145 (38%), Positives = 88/145 (60%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TL+ Y+
Sbjct: 2   QIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F  +QLED R L+ Y I  ES ++L
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHL 145



 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 51/135 (37%), Positives = 77/135 (57%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMI 132
           L   NI  E TL ++
Sbjct: 132 LSDYNIQKESTLHLV 146



 Score = 75.9 bits (185), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 50/151 (33%), Positives = 87/151 (57%), Gaps = 3/151 (1%)

Query: 63  KLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLN 122
           +++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   N
Sbjct: 2   QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 123 INNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCEL 181
           I  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQRL 119

Query: 182 FRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
              G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150


>gi|361130305|pdb|3B08|A Chain A, Crystal Structure Of The Mouse Hoil1-L-Nzf In Complex With
           Linear Di- Ubiquitin
 gi|361130307|pdb|3B08|D Chain D, Crystal Structure Of The Mouse Hoil1-L-Nzf In Complex With
           Linear Di- Ubiquitin
 gi|361130309|pdb|3B08|G Chain G, Crystal Structure Of The Mouse Hoil1-L-Nzf In Complex With
           Linear Di- Ubiquitin
 gi|361130311|pdb|3B08|J Chain J, Crystal Structure Of The Mouse Hoil1-L-Nzf In Complex With
           Linear Di- Ubiquitin
 gi|361130437|pdb|3B0A|A Chain A, Crystal Structure Of The Mouse Hoil1-L-Nzf In Complex With
           Linear Di- Ubiquitin
 gi|361130439|pdb|3B0A|D Chain D, Crystal Structure Of The Mouse Hoil1-L-Nzf In Complex With
           Linear Di- Ubiquitin
          Length = 152

 Score = 91.7 bits (226), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 56/145 (38%), Positives = 88/145 (60%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TL+ Y+
Sbjct: 2   QIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F  +QLED R L+ Y I  ES ++L
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHL 145



 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 51/135 (37%), Positives = 77/135 (57%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMI 132
           L   NI  E TL ++
Sbjct: 132 LSDYNIQKESTLHLV 146



 Score = 78.6 bits (192), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 51/152 (33%), Positives = 88/152 (57%), Gaps = 3/152 (1%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150


>gi|256079432|ref|XP_002575991.1| ubiquitin (ribosomal protein L40) [Schistosoma mansoni]
          Length = 153

 Score = 91.7 bits (226), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 56/145 (38%), Positives = 88/145 (60%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TL+ Y+
Sbjct: 2   QIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F  +QLED R L+ Y I  ES ++L
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHL 145



 Score = 80.1 bits (196), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 52/155 (33%), Positives = 89/155 (57%), Gaps = 3/155 (1%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSI 215
           L   G+QL++ +TL+ Y+I++   L ++  ++  I
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGI 153



 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 51/135 (37%), Positives = 77/135 (57%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMI 132
           L   NI  E TL ++
Sbjct: 132 LSDYNIQKESTLHLV 146


>gi|56199552|gb|AAV84265.1| ubiquitin [Culicoides sonorensis]
          Length = 167

 Score = 91.7 bits (226), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 56/145 (38%), Positives = 88/145 (60%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TL+ Y+
Sbjct: 2   QIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F  +QLED R L+ Y I  ES ++L
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHL 145



 Score = 87.8 bits (216), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 59/169 (34%), Positives = 97/169 (57%), Gaps = 5/169 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIIL 227
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I L
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL 167



 Score = 83.2 bits (204), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 56/151 (37%), Positives = 85/151 (56%), Gaps = 6/151 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS 148
           L   NI  E TL ++   +   +IFV+T T 
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 162


>gi|238580222|ref|XP_002389222.1| hypothetical protein MPER_11681 [Moniliophthora perniciosa FA553]
 gi|215451253|gb|EEB90152.1| hypothetical protein MPER_11681 [Moniliophthora perniciosa FA553]
          Length = 153

 Score = 91.7 bits (226), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 56/145 (38%), Positives = 88/145 (60%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TL+ Y+
Sbjct: 2   QIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F  +QLED R L+ Y I  ES ++L
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHL 145



 Score = 78.2 bits (191), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 50/152 (32%), Positives = 88/152 (57%), Gaps = 3/152 (1%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150



 Score = 77.4 bits (189), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 49/135 (36%), Positives = 77/135 (57%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMI 132
           L   NI  E TL ++
Sbjct: 132 LSDYNIQKESTLHLV 146


>gi|350537349|ref|NP_001232755.1| putative ubiquitin C variant 4 [Taeniopygia guttata]
 gi|326929576|ref|XP_003210936.1| PREDICTED: polyubiquitin-like [Meleagris gallopavo]
 gi|197129060|gb|ACH45558.1| putative ubiquitin C variant 4 [Taeniopygia guttata]
 gi|225708456|gb|ACO10074.1| Ubiquitin [Osmerus mordax]
          Length = 153

 Score = 91.7 bits (226), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 56/145 (38%), Positives = 88/145 (60%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TL+ Y+
Sbjct: 2   QIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F  +QLED R L+ Y I  ES ++L
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHL 145



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 51/135 (37%), Positives = 77/135 (57%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMI 132
           L   NI  E TL ++
Sbjct: 132 LSDYNIQKESTLHLV 146



 Score = 78.6 bits (192), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 51/152 (33%), Positives = 88/152 (57%), Gaps = 3/152 (1%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150


>gi|226484009|emb|CAX79673.1| ubiquitin C [Schistosoma japonicum]
 gi|226484011|emb|CAX79674.1| ubiquitin C [Schistosoma japonicum]
 gi|226484013|emb|CAX79675.1| ubiquitin C [Schistosoma japonicum]
          Length = 153

 Score = 91.7 bits (226), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 56/145 (38%), Positives = 88/145 (60%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TL+ Y+
Sbjct: 2   QIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F  +QLED R L+ Y I  ES ++L
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHL 145



 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 51/135 (37%), Positives = 77/135 (57%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMI 132
           L   NI  E TL ++
Sbjct: 132 LSDYNIQKESTLHLV 146



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 51/155 (32%), Positives = 89/155 (57%), Gaps = 3/155 (1%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSI 215
           L   G+QL++ +TL+ Y+I++   L ++  ++  +
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGL 153


>gi|71835909|gb|AAZ42330.1| ubiquitin protein 1 [Caenorhabditis remanei]
          Length = 164

 Score = 91.7 bits (226), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 56/145 (38%), Positives = 88/145 (60%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TL+ Y+
Sbjct: 12  QIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYN 70

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+
Sbjct: 71  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 130

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F  +QLED R L+ Y I  ES ++L
Sbjct: 131 FAGKQLEDGRTLSDYNIQKESTLHL 155



 Score = 81.3 bits (199), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 52/150 (34%), Positives = 87/150 (58%), Gaps = 3/150 (2%)

Query: 60  GVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLD 119
           G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL 
Sbjct: 9   GGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLS 67

Query: 120 VLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSED 178
             NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP + 
Sbjct: 68  DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPPDQ 126

Query: 179 CELFRGGEQLQNLKTLAYYDIKENEVLQII 208
             L   G+QL++ +TL+ Y+I++   L ++
Sbjct: 127 QRLIFAGKQLEDGRTLSDYNIQKESTLHLV 156



 Score = 79.7 bits (195), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 51/135 (37%), Positives = 77/135 (57%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 25  LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 82

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 83  LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 141

Query: 118 LDVLNINNEDTLQMI 132
           L   NI  E TL ++
Sbjct: 142 LSDYNIQKESTLHLV 156


>gi|84998672|ref|XP_954057.1| ubiquitin [Theileria annulata]
 gi|65305055|emb|CAI73380.1| ubiquitin, putative [Theileria annulata]
          Length = 159

 Score = 91.7 bits (226), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 56/145 (38%), Positives = 88/145 (60%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TL+ Y+
Sbjct: 2   QIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F  +QLED R L+ Y I  ES ++L
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHL 145



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 51/135 (37%), Positives = 77/135 (57%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMI 132
           L   NI  E TL ++
Sbjct: 132 LSDYNIQKESTLHLV 146



 Score = 78.2 bits (191), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 51/152 (33%), Positives = 88/152 (57%), Gaps = 3/152 (1%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150


>gi|403221030|dbj|BAM39163.1| ubiquitin [Theileria orientalis strain Shintoku]
          Length = 155

 Score = 91.7 bits (226), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 56/145 (38%), Positives = 88/145 (60%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TL+ Y+
Sbjct: 2   QIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F  +QLED R L+ Y I  ES ++L
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHL 145



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 51/135 (37%), Positives = 77/135 (57%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMI 132
           L   NI  E TL ++
Sbjct: 132 LSDYNIQKESTLHLV 146



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 51/156 (32%), Positives = 89/156 (57%), Gaps = 3/156 (1%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSIF 216
           L   G+QL++ +TL+ Y+I++   L ++  ++  + 
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGLI 154


>gi|212851|gb|AAA49129.1| ubiquitin polyprotein (heat shock related), partial [Gallus gallus]
          Length = 157

 Score = 91.7 bits (226), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 56/145 (38%), Positives = 88/145 (60%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TL+ Y+
Sbjct: 6   QIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYN 64

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+
Sbjct: 65  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 124

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F  +QLED R L+ Y I  ES ++L
Sbjct: 125 FAGKQLEDGRTLSDYNIQKESTLHL 149



 Score = 80.1 bits (196), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 52/156 (33%), Positives = 89/156 (57%), Gaps = 3/156 (1%)

Query: 60  GVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLD 119
           G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL 
Sbjct: 3   GGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLS 61

Query: 120 VLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSED 178
             NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP + 
Sbjct: 62  DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQ 120

Query: 179 CELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
             L   G+QL++ +TL+ Y+I++   L ++  ++  
Sbjct: 121 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 156



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 51/135 (37%), Positives = 77/135 (57%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 19  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 76

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 77  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 135

Query: 118 LDVLNINNEDTLQMI 132
           L   NI  E TL ++
Sbjct: 136 LSDYNIQKESTLHLV 150


>gi|326931517|ref|XP_003211875.1| PREDICTED: polyubiquitin-B-like isoform 1 [Meleagris gallopavo]
 gi|326931519|ref|XP_003211876.1| PREDICTED: polyubiquitin-B-like isoform 2 [Meleagris gallopavo]
 gi|149052896|gb|EDM04713.1| rCG34296, isoform CRA_a [Rattus norvegicus]
 gi|149052897|gb|EDM04714.1| rCG34296, isoform CRA_a [Rattus norvegicus]
 gi|344245202|gb|EGW01306.1| Ubiquitin [Cricetulus griseus]
          Length = 153

 Score = 91.7 bits (226), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 56/145 (38%), Positives = 88/145 (60%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TL+ Y+
Sbjct: 2   QIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F  +QLED R L+ Y I  ES ++L
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHL 145



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 51/135 (37%), Positives = 77/135 (57%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMI 132
           L   NI  E TL ++
Sbjct: 132 LSDYNIQKESTLHLV 146



 Score = 78.2 bits (191), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 51/152 (33%), Positives = 88/152 (57%), Gaps = 3/152 (1%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150


>gi|164661299|ref|XP_001731772.1| hypothetical protein MGL_1040 [Malassezia globosa CBS 7966]
 gi|159105673|gb|EDP44558.1| hypothetical protein MGL_1040 [Malassezia globosa CBS 7966]
          Length = 154

 Score = 91.7 bits (226), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 56/145 (38%), Positives = 88/145 (60%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TL+ Y+
Sbjct: 2   QIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F  +QLED R L+ Y I  ES ++L
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHL 145



 Score = 79.7 bits (195), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 50/156 (32%), Positives = 89/156 (57%), Gaps = 3/156 (1%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSIF 216
           L   G+QL++ +TL+ Y+I++   L ++  ++  + 
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGVM 154



 Score = 77.4 bits (189), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 49/135 (36%), Positives = 77/135 (57%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMI 132
           L   NI  E TL ++
Sbjct: 132 LSDYNIQKESTLHLV 146


>gi|209875527|ref|XP_002139206.1| ubiquitin family protein [Cryptosporidium muris RN66]
 gi|209554812|gb|EEA04857.1| ubiquitin family protein [Cryptosporidium muris RN66]
          Length = 155

 Score = 91.7 bits (226), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 56/145 (38%), Positives = 88/145 (60%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TL+ Y+
Sbjct: 2   QIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F  +QLED R L+ Y I  ES ++L
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHL 145



 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 51/135 (37%), Positives = 77/135 (57%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMI 132
           L   NI  E TL ++
Sbjct: 132 LSDYNIQKESTLHLV 146



 Score = 78.2 bits (191), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 51/152 (33%), Positives = 88/152 (57%), Gaps = 3/152 (1%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150


>gi|428164090|gb|EKX33130.1| ubiquitin [Guillardia theta CCMP2712]
          Length = 153

 Score = 91.3 bits (225), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 58/145 (40%), Positives = 86/145 (59%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + T+  VK  ++  +  IP +   L   G+QL++ +TLA Y+
Sbjct: 2   QIFVKTLTGKTITLEVESSDTIDMVKSKIQD-KEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    IFVK L G+ I LEV   DT+  VK K+  + G  PD QRL+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDMVKSKIQDKEGIPPDQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F  +QLED R LA Y I  ES ++L
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHL 145



 Score = 73.9 bits (180), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 50/152 (32%), Positives = 86/152 (56%), Gaps = 3/152 (1%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+ +K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDMVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+  VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDMVKSKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           L   G+QL++ +TLA Y+I++   L ++  ++
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 150



 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 48/135 (35%), Positives = 76/135 (56%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDMVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+ +K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDMVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMI 132
           L   NI  E TL ++
Sbjct: 132 LADYNIQKESTLHLV 146


>gi|14250448|gb|AAH08661.1| Ubc protein [Mus musculus]
          Length = 202

 Score = 91.3 bits (225), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 63/181 (34%), Positives = 103/181 (56%), Gaps = 5/181 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I L+V    T + V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSVTTKKV 178

Query: 239 K 239
           K
Sbjct: 179 K 179



 Score = 90.9 bits (224), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 56/145 (38%), Positives = 88/145 (60%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TL+ Y+
Sbjct: 2   QIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F  +QLED R L+ Y I  ES ++L
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHL 145



 Score = 86.7 bits (213), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 62/169 (36%), Positives = 95/169 (56%), Gaps = 7/169 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKK 165
           L   NI  E TL ++   +   +IFV+T T  T+ L+V  + T   VK+
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSVTTKKVKQ 180


>gi|324532777|gb|ADY49258.1| Polyubiquitin, partial [Ascaris suum]
          Length = 187

 Score = 91.3 bits (225), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 56/145 (38%), Positives = 88/145 (60%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TL+ Y+
Sbjct: 2   QIFVKTLTGKTITLEVESSDTIENVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    IFVK L G+ + LEV   D V+ VK K+  + G  PD QRL+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTLTLEVEPSDAVQHVKAKIQDKEGIPPDQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F  +QLEDDR L+ Y I  ES ++L
Sbjct: 121 FAGKQLEDDRTLSDYNIQKESTLHL 145



 Score = 78.2 bits (191), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 56/178 (31%), Positives = 96/178 (53%), Gaps = 5/178 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  +  V  VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTLTLEVEPSDAVQHVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSIFVK--LLNGRYIILEVAKFDTVR 236
           L   G+QL++ +TL+ Y+I++   L ++  ++  + V       R +  +V   D+V+
Sbjct: 119 LIFAGKQLEDDRTLSDYNIQKESTLHLVLRLRGGVRVSANAFACRDVTPQVESSDSVK 176



 Score = 74.7 bits (182), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 47/135 (34%), Positives = 76/135 (56%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SD ++++K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTLTLEVEPSDAVQHVKAKIQDKEGIPPDQQRLIFAGKQLEDDRT 131

Query: 118 LDVLNINNEDTLQMI 132
           L   NI  E TL ++
Sbjct: 132 LSDYNIQKESTLHLV 146


>gi|428672795|gb|EKX73708.1| ubiquitin family member protein [Babesia equi]
          Length = 155

 Score = 91.3 bits (225), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 56/145 (38%), Positives = 88/145 (60%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TL+ Y+
Sbjct: 2   QIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F  +QLED R L+ Y I  ES ++L
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHL 145



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 51/135 (37%), Positives = 77/135 (57%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMI 132
           L   NI  E TL ++
Sbjct: 132 LSDYNIQKESTLHLV 146



 Score = 78.2 bits (191), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 51/156 (32%), Positives = 88/156 (56%), Gaps = 3/156 (1%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSIF 216
           L   G+QL++ +TL+ Y+I++   L ++  ++    
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGCM 154


>gi|290979754|ref|XP_002672598.1| polyubiquitin [Naegleria gruberi]
 gi|284086176|gb|EFC39854.1| polyubiquitin [Naegleria gruberi]
          Length = 154

 Score = 91.3 bits (225), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 57/146 (39%), Positives = 86/146 (58%), Gaps = 5/146 (3%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV    T+ +VK  ++  +  IP +   L   G+QL++ +TL+ Y+
Sbjct: 2   QIFVKTLTGKTITLEVESNDTIENVKSKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 199 IKENEVLQII---RHVKHSIFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRL 255
           I++   L ++   R     IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL
Sbjct: 61  IQKESTLHLVLRLRGGGMQIFVKTLTGKTITLEVESNDTIENVKSKIQDKEGIPPDQQRL 120

Query: 256 VFKRQQLEDDRNLASYKIVNESIVNL 281
           +F  +QLED R L+ Y I  ES ++L
Sbjct: 121 IFAGKQLEDGRTLSDYNIQKESTLHL 146



 Score = 76.3 bits (186), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 50/136 (36%), Positives = 76/136 (55%), Gaps = 7/136 (5%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---- 56
           ++V+  + IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESNDTIENVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 57  NDSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYI 116
              G M+++ KT +  KT  L+   +DTIEN+K  I+ +EGIP  +  + + GK +E   
Sbjct: 73  LRGGGMQIFVKTLTG-KTITLEVESNDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGR 131

Query: 117 TLDVLNINNEDTLQMI 132
           TL   NI  E TL ++
Sbjct: 132 TLSDYNIQKESTLHLV 147



 Score = 73.6 bits (179), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 50/153 (32%), Positives = 87/153 (56%), Gaps = 4/153 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   +DTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESNDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMI-SVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDC 179
           NI  E TL ++  +     +IFV+T T  T+ LEV    T+ +VK  ++  +  IP +  
Sbjct: 60  NIQKESTLHLVLRLRGGGMQIFVKTLTGKTITLEVESNDTIENVKSKIQD-KEGIPPDQQ 118

Query: 180 ELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
            L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 119 RLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 151


>gi|28189839|dbj|BAC56534.1| similar to polyubiquitin [Bos taurus]
          Length = 157

 Score = 91.3 bits (225), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 56/145 (38%), Positives = 88/145 (60%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TL+ Y+
Sbjct: 6   QIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYN 64

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+
Sbjct: 65  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 124

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F  +QLED R L+ Y I  ES ++L
Sbjct: 125 FAGKQLEDGRTLSDYNIQKESTLHL 149



 Score = 79.7 bits (195), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 52/156 (33%), Positives = 89/156 (57%), Gaps = 3/156 (1%)

Query: 60  GVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLD 119
           G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL 
Sbjct: 3   GGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLS 61

Query: 120 VLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSED 178
             NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP + 
Sbjct: 62  DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQ 120

Query: 179 CELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
             L   G+QL++ +TL+ Y+I++   L ++  ++  
Sbjct: 121 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 156



 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 51/135 (37%), Positives = 77/135 (57%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 19  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 76

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 77  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 135

Query: 118 LDVLNINNEDTLQMI 132
           L   NI  E TL ++
Sbjct: 136 LSDYNIQKESTLHLV 150


>gi|28189917|dbj|BAC56573.1| similar to polyubiquitin [Bos taurus]
          Length = 171

 Score = 91.3 bits (225), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 56/145 (38%), Positives = 88/145 (60%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TL+ Y+
Sbjct: 11  QIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYN 69

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+
Sbjct: 70  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 129

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F  +QLED R L+ Y I  ES ++L
Sbjct: 130 FAGKQLEDGRTLSDYNIQKESTLHL 154



 Score = 84.3 bits (207), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 57/164 (34%), Positives = 94/164 (57%), Gaps = 5/164 (3%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 10  MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 68

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 69  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 127

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNG 222
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G
Sbjct: 128 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 171



 Score = 83.2 bits (204), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 56/151 (37%), Positives = 85/151 (56%), Gaps = 6/151 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 24  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 81

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 82  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 140

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS 148
           L   NI  E TL ++   +   +IFV+T T 
Sbjct: 141 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 171



 Score = 67.8 bits (164), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 37/77 (48%), Positives = 48/77 (62%)

Query: 205 LQIIRHVKHSIFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLED 264
           L+I   VK  IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+F  +QLED
Sbjct: 2   LRIHSQVKMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 61

Query: 265 DRNLASYKIVNESIVNL 281
            R L+ Y I  ES ++L
Sbjct: 62  GRTLSDYNIQKESTLHL 78


>gi|343960965|dbj|BAK62072.1| ubiquitin [Pan troglodytes]
          Length = 177

 Score = 91.3 bits (225), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 56/145 (38%), Positives = 88/145 (60%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TL+ Y+
Sbjct: 2   QIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F  +QLED R L+ Y I  ES ++L
Sbjct: 121 FAGKQLEDGRALSDYNIQKESTLHL 145



 Score = 91.3 bits (225), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 61/172 (35%), Positives = 99/172 (57%), Gaps = 5/172 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVA 230
           L   G+QL++ + L+ Y+I++   L ++  ++    IFVK L G+ I LEVA
Sbjct: 119 LIFAGKQLEDGRALSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVA 170



 Score = 83.6 bits (205), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 59/158 (37%), Positives = 89/158 (56%), Gaps = 7/158 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E    
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRA 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEV 154
           L   NI  E TL ++   +   +IFV+T T  T+ LEV
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEV 169


>gi|395836339|ref|XP_003791115.1| PREDICTED: polyubiquitin-B [Otolemur garnettii]
 gi|149287178|gb|ABR23488.1| ubiquitin/40S ribosomal protein S27a [Ornithodoros parkeri]
 gi|194374819|dbj|BAG62524.1| unnamed protein product [Homo sapiens]
          Length = 153

 Score = 91.3 bits (225), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 56/145 (38%), Positives = 88/145 (60%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TL+ Y+
Sbjct: 2   QIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F  +QLED R L+ Y I  ES ++L
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHL 145



 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 51/135 (37%), Positives = 77/135 (57%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMI 132
           L   NI  E TL ++
Sbjct: 132 LSDYNIQKESTLHLV 146



 Score = 78.2 bits (191), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 51/152 (33%), Positives = 88/152 (57%), Gaps = 3/152 (1%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150


>gi|5523969|gb|AAD44037.1|AF104020_1 polyprotein [Bovine viral diarrhea virus 2]
          Length = 318

 Score = 91.3 bits (225), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 58/158 (36%), Positives = 93/158 (58%), Gaps = 4/158 (2%)

Query: 127 DTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGG 185
            TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G
Sbjct: 98  STLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQRRLIFAG 156

Query: 186 EQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLF 243
           +QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+ 
Sbjct: 157 KQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQ 216

Query: 244 REIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
            + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 217 DKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 254



 Score = 78.2 bits (191), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 52/150 (34%), Positives = 87/150 (58%), Gaps = 3/150 (2%)

Query: 60  GVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLD 119
           G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL 
Sbjct: 108 GGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQRRLIFAGKQLEDGRTLS 166

Query: 120 VLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSED 178
             NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP + 
Sbjct: 167 DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQ 225

Query: 179 CELFRGGEQLQNLKTLAYYDIKENEVLQII 208
             L   G+QL++ +TL+ Y+I++   L ++
Sbjct: 226 QRLIFAGKQLEDGRTLSDYNIQKESTLHLV 255



 Score = 77.4 bits (189), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 51/135 (37%), Positives = 77/135 (57%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 124 LEVEPSDTIENVKAKIQDK--EGIPPDQRRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 181

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 182 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 240

Query: 118 LDVLNINNEDTLQMI 132
           L   NI  E TL ++
Sbjct: 241 LSDYNIQKESTLHLV 255


>gi|346321308|gb|EGX90907.1| RING and UBP finger domain protein [Cordyceps militaris CM01]
          Length = 776

 Score = 91.3 bits (225), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 56/145 (38%), Positives = 88/145 (60%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TL+ Y+
Sbjct: 2   QIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F  +QLED R L+ Y I  ES ++L
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHL 145



 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 49/136 (36%), Positives = 77/136 (56%), Gaps = 6/136 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMIS 133
           L   NI  E TL + +
Sbjct: 132 LSDYNIQKESTLHLYT 147



 Score = 74.7 bits (182), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 50/147 (34%), Positives = 85/147 (57%), Gaps = 3/147 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQI 207
           L   G+QL++ +TL+ Y+I++   L +
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHL 145


>gi|163575|gb|AAA30720.1| polyubiquitin, partial [Bos taurus]
          Length = 164

 Score = 91.3 bits (225), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 58/157 (36%), Positives = 93/157 (59%), Gaps = 4/157 (2%)

Query: 128 TLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGE 186
           TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+
Sbjct: 1   TLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQRLIFAGK 59

Query: 187 QLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFR 244
           QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  
Sbjct: 60  QLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD 119

Query: 245 EIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 120 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 156



 Score = 79.7 bits (195), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 52/154 (33%), Positives = 89/154 (57%), Gaps = 3/154 (1%)

Query: 60  GVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLD 119
           G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL 
Sbjct: 10  GGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLS 68

Query: 120 VLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSED 178
             NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP + 
Sbjct: 69  DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQ 127

Query: 179 CELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
             L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 128 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 161



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 51/135 (37%), Positives = 77/135 (57%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 26  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 83

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 84  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 142

Query: 118 LDVLNINNEDTLQMI 132
           L   NI  E TL ++
Sbjct: 143 LSDYNIQKESTLHLV 157


>gi|388571222|gb|AFK73707.1| ubiquitin [Ostrea edulis]
          Length = 153

 Score = 91.3 bits (225), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 56/145 (38%), Positives = 88/145 (60%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TL+ Y+
Sbjct: 2   QIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDRQRLIFAGKQLEDGRTLSDYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F  +QLED R L+ Y I  ES ++L
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHL 145



 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 51/135 (37%), Positives = 77/135 (57%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDRQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMI 132
           L   NI  E TL ++
Sbjct: 132 LSDYNIQKESTLHLV 146



 Score = 77.8 bits (190), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 51/152 (33%), Positives = 87/152 (57%), Gaps = 3/152 (1%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP     + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDRQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150


>gi|388516797|gb|AFK46460.1| unknown [Medicago truncatula]
          Length = 153

 Score = 91.3 bits (225), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 57/145 (39%), Positives = 87/145 (60%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TLA Y+
Sbjct: 2   QIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F  +QLED R LA Y I  E  ++L
Sbjct: 121 FAGKQLEDGRTLADYNIQKEFTLHL 145



 Score = 77.8 bits (190), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 51/154 (33%), Positives = 88/154 (57%), Gaps = 3/154 (1%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
           L   G+QL++ +TLA Y+I++   L ++  ++  
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKEFTLHLVLRLRGG 152



 Score = 75.9 bits (185), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 49/135 (36%), Positives = 77/135 (57%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMI 132
           L   NI  E TL ++
Sbjct: 132 LADYNIQKEFTLHLV 146


>gi|355753795|gb|EHH57760.1| Polyubiquitin-C [Macaca fascicularis]
          Length = 153

 Score = 91.3 bits (225), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 56/145 (38%), Positives = 88/145 (60%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TL+ Y+
Sbjct: 2   QIFVKTLTGKTITLEVEPSDTLENVKAKIQD-KEGIPPDQQRLIFAGQQLEDGRTLSDYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F  +QLED R L+ Y I  ES ++L
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHL 145



 Score = 80.1 bits (196), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 51/135 (37%), Positives = 77/135 (57%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ +E +K +I  K  E I  D   L +AGQQLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTLENVKAKIQDK--EGIPPDQQRLIFAGQQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMI 132
           L   NI  E TL ++
Sbjct: 132 LSDYNIQKESTLHLV 146



 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 88/152 (57%), Gaps = 3/152 (1%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDT+EN+K  I+ +EGIP  +  + + G+ +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTLENVKAKIQDKEGIPPDQQRLIFAGQQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150


>gi|226477466|emb|CAX72427.1| polyubiquitin [Schistosoma japonicum]
          Length = 170

 Score = 91.3 bits (225), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 56/145 (38%), Positives = 88/145 (60%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TL+ Y+
Sbjct: 2   QIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F  +QLED R L+ Y I  ES ++L
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHL 145



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 51/135 (37%), Positives = 77/135 (57%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMI 132
           L   NI  E TL ++
Sbjct: 132 LSDYNIQKESTLHLV 146



 Score = 77.8 bits (190), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 51/148 (34%), Positives = 86/148 (58%), Gaps = 3/148 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQII 208
           L   G+QL++ +TL+ Y+I++   L ++
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLV 146


>gi|374073976|pdb|2Y5B|B Chain B, Structure Of Usp21 In Complex With Linear
           Diubiquitin-Aldehyde
 gi|374073978|pdb|2Y5B|F Chain F, Structure Of Usp21 In Complex With Linear
           Diubiquitin-Aldehyde
          Length = 152

 Score = 91.3 bits (225), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 56/145 (38%), Positives = 88/145 (60%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TL+ Y+
Sbjct: 2   QIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 199 IKENEVLQIIRHVKH--SIFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+
Sbjct: 61  IQKESTLHLVLRLRGHMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F  +QLED R L+ Y I  ES ++L
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHL 145



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 51/135 (37%), Positives = 77/135 (57%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGHMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMI 132
           L   NI  E TL ++
Sbjct: 132 LSDYNIQKESTLHLV 146



 Score = 78.2 bits (191), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 51/148 (34%), Positives = 86/148 (58%), Gaps = 3/148 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGHMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQII 208
           L   G+QL++ +TL+ Y+I++   L ++
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLV 146


>gi|54610299|gb|AAV35212.1| polyubiquitin-like protein [Schistosoma japonicum]
          Length = 156

 Score = 90.9 bits (224), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 56/148 (37%), Positives = 89/148 (60%), Gaps = 4/148 (2%)

Query: 137 ELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLA 195
           E  +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TL+
Sbjct: 2   ERMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLS 60

Query: 196 YYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQ 253
            Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD Q
Sbjct: 61  DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQ 120

Query: 254 RLVFKRQQLEDDRNLASYKIVNESIVNL 281
           RL+F  +QLED R L+ Y I  E+ ++L
Sbjct: 121 RLIFAGKQLEDGRTLSDYNIQKEATLHL 148



 Score = 78.6 bits (192), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 51/155 (32%), Positives = 89/155 (57%), Gaps = 3/155 (1%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 4   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 62

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 63  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 121

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSI 215
           L   G+QL++ +TL+ Y+I++   L ++  ++  +
Sbjct: 122 LIFAGKQLEDGRTLSDYNIQKEATLHLVLRLRGGL 156



 Score = 78.6 bits (192), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 51/135 (37%), Positives = 77/135 (57%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 18  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 75

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 76  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 134

Query: 118 LDVLNINNEDTLQMI 132
           L   NI  E TL ++
Sbjct: 135 LSDYNIQKEATLHLV 149



 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 34/72 (47%), Positives = 45/72 (62%)

Query: 210 HVKHSIFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLA 269
           H +  IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+F  +QLED R L+
Sbjct: 1   HERMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLS 60

Query: 270 SYKIVNESIVNL 281
            Y I  ES ++L
Sbjct: 61  DYNIQKESTLHL 72


>gi|449483218|ref|XP_004156525.1| PREDICTED: ubiquitin-60S ribosomal protein L40-like [Cucumis
           sativus]
          Length = 208

 Score = 90.9 bits (224), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 58/149 (38%), Positives = 88/149 (59%), Gaps = 8/149 (5%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TLA Y+
Sbjct: 2   QIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 199 IKENEVLQIIRHVKHSI------FVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDS 252
           I++   L ++  ++  I      FVK L G+ I LEV   DT+ +VK K+  + G  PD 
Sbjct: 61  IQKESTLHLVLRLRGGIIEPMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 120

Query: 253 QRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 121 QRLIFAGKQLEDGRTLADYNIQKESTLHL 149



 Score = 75.9 bits (185), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/160 (33%), Positives = 90/160 (56%), Gaps = 7/160 (4%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPK----ELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS 176
           NI  E TL ++   +    E  +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP 
Sbjct: 60  NIQKESTLHLVLRLRGGIIEPMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPP 118

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSIF 216
           +   L   G+QL++ +TLA Y+I++   L ++  ++  I 
Sbjct: 119 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGII 158



 Score = 73.9 bits (180), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 49/139 (35%), Positives = 78/139 (56%), Gaps = 10/139 (7%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---- 56
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 57  NDSGV---MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIE 113
              G+   M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E
Sbjct: 73  LRGGIIEPMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLE 131

Query: 114 SYITLDVLNINNEDTLQMI 132
              TL   NI  E TL ++
Sbjct: 132 DGRTLADYNIQKESTLHLV 150


>gi|75858833|gb|ABA28993.1| polyubiquitin [Symbiodinium sp. C3]
          Length = 176

 Score = 90.9 bits (224), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 60/177 (33%), Positives = 102/177 (57%), Gaps = 5/177 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SD+IEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDSIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + ++ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKTKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTV 235
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   D++
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSI 175



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 54/145 (37%), Positives = 88/145 (60%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + ++ +VK  ++  +  IP +   L   G+QL++ +TL+ Y+
Sbjct: 2   QIFVKTLTGKTITLEVEPSDSIENVKTKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    IFVK L G+ I LEV   D++ +VK K+  + G  PD QRL+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKTKIQDKEGIPPDQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F  +QLED R L+ Y I  ES ++L
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHL 145



 Score = 85.1 bits (209), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 59/164 (35%), Positives = 93/164 (56%), Gaps = 7/164 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDSIENVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SD+IEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDSIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTV 160
           L   NI  E TL ++   +   +IFV+T T  T+ LEV  + ++
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSI 175


>gi|5523979|gb|AAD44042.1|AF104025_1 polyprotein [Bovine viral diarrhea virus 2]
          Length = 432

 Score = 90.9 bits (224), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 56/145 (38%), Positives = 88/145 (60%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TL+ Y+
Sbjct: 225 QIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYN 283

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+
Sbjct: 284 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 343

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F  +QLED R L+ Y I  ES ++L
Sbjct: 344 FAGKQLEDGRTLSDYNIQKESTLHL 368



 Score = 77.8 bits (190), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 64/208 (30%), Positives = 108/208 (51%), Gaps = 19/208 (9%)

Query: 2   KVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIHNDSGV 61
           K  K ++IEK K++I  K  E+  +  P             T++  G+          G 
Sbjct: 180 KQPKPDRIEKGKMKIAPKETEKDSKTRPP----------DATIVVEGV------KYQVGG 223

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 224 MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 282

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 283 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 341

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQII 208
           L   G+QL++ +TL+ Y+I++   L ++
Sbjct: 342 LIFAGKQLEDGRTLSDYNIQKESTLHLV 369


>gi|358060688|dbj|GAA93627.1| hypothetical protein E5Q_00271 [Mixia osmundae IAM 14324]
          Length = 1022

 Score = 90.5 bits (223), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 55/145 (37%), Positives = 87/145 (60%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPT-STVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TL+ Y+
Sbjct: 260 QIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYN 318

Query: 199 IKENEVLQIIRHVK--HSIFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I+ +    ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+
Sbjct: 319 IRRSLPSTLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 378

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F  +QLED R L+ Y I  ES ++L
Sbjct: 379 FAGKQLEDGRTLSDYNIQKESTLHL 403



 Score = 77.0 bits (188), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 49/136 (36%), Positives = 78/136 (57%), Gaps = 8/136 (5%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGI----PNNSVIH 56
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I    P+  V+ 
Sbjct: 273 LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIRRSLPSTLVLR 330

Query: 57  NDSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYI 116
              G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   
Sbjct: 331 LRGG-MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 388

Query: 117 TLDVLNINNEDTLQMI 132
           TL   NI  E TL ++
Sbjct: 389 TLSDYNIQKESTLHLV 404



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 47/152 (30%), Positives = 85/152 (55%), Gaps = 3/152 (1%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 259 MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 317

Query: 122 NINNEDTLQMISVPKELQEIFVQTPT-STVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI       ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 318 NIRRSLPSTLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 376

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 377 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 408


>gi|357132045|ref|XP_003567643.1| PREDICTED: ubiquitin-60S ribosomal protein L40-like [Brachypodium
           distachyon]
          Length = 218

 Score = 90.5 bits (223), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 59/145 (40%), Positives = 85/145 (58%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV    T+  VK  ++  +  IP +   L   G+QL + +TLA Y+
Sbjct: 2   QIFVKTLTGKTITLEVESRDTIDSVKAKIQD-KEGIPPDQQRLIFAGKQLDDGRTLADYN 60

Query: 199 IKENEVLQIIRHV--KHSIFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  +  K  IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+
Sbjct: 61  IQKESTLHLVLRLRAKMQIFVKTLTGKTITLEVESSDTIDNVKAKIHDKEGIPPDQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F  +QLED R LA Y I  ES ++L
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHL 145



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 47/135 (34%), Positives = 74/135 (54%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+  + I+ +K +I  K  E I  D   L +AG+QL++G T+ DY I   S +H    
Sbjct: 15  LEVESRDTIDSVKAKIQDK--EGIPPDQQRLIFAGKQLDDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
               M+++ KT +  KT  L+   SDTI+N+K  I  +EGIP  +  + + GK +E   T
Sbjct: 73  LRAKMQIFVKTLTG-KTITLEVESSDTIDNVKAKIHDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMI 132
           L   NI  E TL ++
Sbjct: 132 LADYNIQKESTLHLV 146



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 48/148 (32%), Positives = 84/148 (56%), Gaps = 3/148 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+    DTI+++K  I+ +EGIP  +  + + GK ++   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESRDTIDSVKAKIQDKEGIPPDQQRLIFAGKQLDDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  +   +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRAKMQIFVKTLTGKTITLEVESSDTIDNVKAKIHD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQII 208
           L   G+QL++ +TLA Y+I++   L ++
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLV 146


>gi|118793820|ref|XP_321091.3| AGAP001970-PA [Anopheles gambiae str. PEST]
 gi|116115995|gb|EAA01176.4| AGAP001970-PA [Anopheles gambiae str. PEST]
          Length = 236

 Score = 90.5 bits (223), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 67/223 (30%), Positives = 114/223 (51%), Gaps = 5/223 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L    S+T+ +IK  IE REGI   +  I + GK ++    +   
Sbjct: 1   MQIFVKTLTG-KTITLDVIASETVLDIKSKIEQREGIAPDQQRIIFAGKQLDDGRIISDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI +  T+ ++   K   +IFV+  T  T+ ++     TV  VKK ++  R  IP     
Sbjct: 60  NIQHGSTMHLVLRLKGGMQIFVRMLTGKTIAIDTEPEATVESVKKQIDE-REEIPPNQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           +   G+QL++ + L  Y I +   + ++  +K    IFV++L G+ I ++     TV  V
Sbjct: 119 MIFAGKQLEDGRQLQEYSIIKASTIHLVLRLKGGMQIFVRMLTGKTIAVDTEPEATVESV 178

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K ++       P+ QR++F  +QLED R L  Y I+  S ++L
Sbjct: 179 KKQIDEREEIPPNQQRMIFAGKQLEDGRQLQEYSIIKASTIHL 221



 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 103/209 (49%), Gaps = 8/209 (3%)

Query: 14  LRIHAKVE--EEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---NDSGVMKLYFKT 68
           L I +K+E  E I  D   + +AG+QL++G  + DY I + S +H      G M+++ + 
Sbjct: 24  LDIKSKIEQREGIAPDQQRIIFAGKQLDDGRIISDYNIQHGSTMHLVLRLKGGMQIFVRM 83

Query: 69  PSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDT 128
            +  KT  +      T+E++K  I+ RE IP ++  + + GK +E    L   +I    T
Sbjct: 84  LTG-KTIAIDTEPEATVESVKKQIDEREEIPPNQQRMIFAGKQLEDGRQLQEYSIIKAST 142

Query: 129 LQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQ 187
           + ++   K   +IFV+  T  T+ ++     TV  VKK ++  R  IP     +   G+Q
Sbjct: 143 IHLVLRLKGGMQIFVRMLTGKTIAVDTEPEATVESVKKQIDE-REEIPPNQQRMIFAGKQ 201

Query: 188 LQNLKTLAYYDIKENEVLQIIRHVKHSIF 216
           L++ + L  Y I +   + ++  +K   F
Sbjct: 202 LEDGRQLQEYSIIKASTIHLVLRLKGGAF 230


>gi|3954791|emb|CAA26488.1| unnamed protein product [Gallus gallus]
          Length = 157

 Score = 90.5 bits (223), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 55/145 (37%), Positives = 87/145 (60%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TL+ Y+
Sbjct: 6   QIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYN 64

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QR +
Sbjct: 65  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRWI 124

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F  +QLED R L+ Y I  ES ++L
Sbjct: 125 FAGKQLEDGRTLSDYNIQKESTLHL 149



 Score = 78.6 bits (192), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 51/156 (32%), Positives = 88/156 (56%), Gaps = 3/156 (1%)

Query: 60  GVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLD 119
           G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL 
Sbjct: 3   GGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLS 61

Query: 120 VLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSED 178
             NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++      P + 
Sbjct: 62  DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQ 121

Query: 179 CELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
             +F  G+QL++ +TL+ Y+I++   L ++  ++  
Sbjct: 122 RWIF-AGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 156



 Score = 77.8 bits (190), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 51/135 (37%), Positives = 76/135 (56%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 19  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 76

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +    + GK +E   T
Sbjct: 77  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRWIFAGKQLEDGRT 135

Query: 118 LDVLNINNEDTLQMI 132
           L   NI  E TL ++
Sbjct: 136 LSDYNIQKESTLHLV 150


>gi|114152964|gb|ABI52648.1| ubiquitin/40S ribosomal protein S27a fusion protein [Argas
           monolakensis]
          Length = 232

 Score = 90.5 bits (223), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 56/145 (38%), Positives = 88/145 (60%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TL+ Y+
Sbjct: 2   QIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F  +QLED R L+ Y I  ES ++L
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHL 145



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 51/135 (37%), Positives = 77/135 (57%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMI 132
           L   NI  E TL ++
Sbjct: 132 LSDYNIQKESTLHLV 146



 Score = 76.6 bits (187), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 51/148 (34%), Positives = 86/148 (58%), Gaps = 3/148 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQII 208
           L   G+QL++ +TL+ Y+I++   L ++
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLV 146


>gi|339232992|ref|XP_003381613.1| ubiquitin family protein [Trichinella spiralis]
 gi|316979552|gb|EFV62333.1| ubiquitin family protein [Trichinella spiralis]
          Length = 193

 Score = 90.5 bits (223), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 55/145 (37%), Positives = 89/145 (61%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + ++ +VK  ++  +  IP +   L   G+QL++ +TL+ Y+
Sbjct: 2   QIFVKTLTGKTITLEVEPSDSIENVKGKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKSKIQDKEGIPPDQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F  +QLED R L++Y I  ES ++L
Sbjct: 121 FAGKQLEDGRMLSNYNIQKESTLHL 145



 Score = 84.3 bits (207), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 58/181 (32%), Positives = 100/181 (55%), Gaps = 5/181 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SD+IEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDSIENVKGKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKSKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ + L+ Y+I++   L ++  ++    I    L G++I +EV   DT   V
Sbjct: 119 LIFAGKQLEDGRMLSNYNIQKESTLHLVLRLRGGMQISATTLTGKHITVEVEPSDTPESV 178

Query: 239 K 239
           +
Sbjct: 179 R 179



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 60/178 (33%), Positives = 95/178 (53%), Gaps = 8/178 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDSIENVKGKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E    
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRM 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTST-VKLEVRRAHTVLDVKKMVESMRICI 174
           L   NI  E TL ++   +   +I   T T   + +EV  + T   V+ +  S+ IC+
Sbjct: 132 LSNYNIQKESTLHLVLRLRGGMQISATTLTGKHITVEVEPSDTPESVRGINPSI-ICL 188


>gi|26353460|dbj|BAC40360.1| unnamed protein product [Mus musculus]
          Length = 153

 Score = 90.1 bits (222), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 55/145 (37%), Positives = 88/145 (60%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   +   G+QL++ +TL+ Y+
Sbjct: 2   QIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQRVIFAGKQLEDGRTLSDYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+
Sbjct: 61  IQKESTLDLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F  +QLED R L+ Y I  ES ++L
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHL 145



 Score = 79.7 bits (195), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 52/154 (33%), Positives = 88/154 (57%), Gaps = 3/154 (1%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRVIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLDLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
           L   G+QL++ +TL+ Y+I++   L ++  V+  
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRVRGG 152



 Score = 73.9 bits (180), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 49/135 (36%), Positives = 76/135 (56%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   + +AG+QLE+G T+ DY I   S +     
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRVIFAGKQLEDGRTLSDYNIQKESTLDLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMI 132
           L   NI  E TL ++
Sbjct: 132 LSDYNIQKESTLHLV 146


>gi|239799385|dbj|BAH70616.1| ACYPI007765 [Acyrthosiphon pisum]
          Length = 153

 Score = 89.7 bits (221), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 54/145 (37%), Positives = 88/145 (60%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + ++ +VK  ++  +  IP +   L   G+QL++ +TL+ Y+
Sbjct: 2   QIFVKTLTGKTITLEVESSDSIENVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    IFVK L G+ I LEV   D++ +VK K+  + G  PD QRL+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDSIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F  +QLED R L+ Y I  ES ++L
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHL 145



 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 50/135 (37%), Positives = 77/135 (57%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDSIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SD+IEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMI 132
           L   NI  E TL ++
Sbjct: 132 LSDYNIQKESTLHLV 146



 Score = 77.8 bits (190), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 49/155 (31%), Positives = 89/155 (57%), Gaps = 3/155 (1%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SD+IEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + ++ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDSIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSI 215
           L   G+QL++ +TL+ Y+I++   L ++  ++  +
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 153


>gi|402471724|gb|EJW05300.1| polyubiquitin [Edhazardia aedis USNM 41457]
          Length = 153

 Score = 89.7 bits (221), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 54/145 (37%), Positives = 88/145 (60%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP +   L   G+QL++ +TL+ Y+
Sbjct: 2   QIFVKTLTGKTITLDVESSDTIENVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    IFVK L G+ I L+V   DT+ +VK K+  + G  PD QRL+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVESSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F  +QLED R L+ Y I  ES ++L
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHL 145



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 51/135 (37%), Positives = 75/135 (55%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LDVESSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLDVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMI 132
           L   NI  E TL ++
Sbjct: 132 LSDYNIQKESTLHLV 146



 Score = 77.8 bits (190), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 50/152 (32%), Positives = 87/152 (57%), Gaps = 3/152 (1%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLDVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVESSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150


>gi|443900281|dbj|GAC77607.1| ubiquitin and ubiquitin-like proteins [Pseudozyma antarctica T-34]
          Length = 228

 Score = 89.7 bits (221), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 56/145 (38%), Positives = 88/145 (60%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TL+ Y+
Sbjct: 2   QIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F  +QLED R L+ Y I  ES ++L
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHL 145



 Score = 80.5 bits (197), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 57/190 (30%), Positives = 98/190 (51%), Gaps = 12/190 (6%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSIFVKLLNGRYIILEVAKFDTVRDVKD 240
           L   G+QL++ +TL+ Y+I++   L ++  ++     +  NG           T    KD
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGAKKRCQNG---------AGTESQCKD 169

Query: 241 KLFREIGQAP 250
                +G+ P
Sbjct: 170 AAINLVGECP 179



 Score = 78.6 bits (192), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 49/135 (36%), Positives = 77/135 (57%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMI 132
           L   NI  E TL ++
Sbjct: 132 LSDYNIQKESTLHLV 146


>gi|239788927|dbj|BAH71116.1| ACYPI006410 [Acyrthosiphon pisum]
          Length = 154

 Score = 89.7 bits (221), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 54/145 (37%), Positives = 88/145 (60%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + ++ +VK  ++  +  IP +   L   G+QL++ +TL+ Y+
Sbjct: 2   QIFVKTLTGKTITLEVESSDSIENVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    IFVK L G+ I LEV   D++ +VK K+  + G  PD QRL+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDSIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F  +QLED R L+ Y I  ES ++L
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHL 145



 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 50/135 (37%), Positives = 77/135 (57%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDSIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SD+IEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMI 132
           L   NI  E TL ++
Sbjct: 132 LSDYNIQKESTLHLV 146



 Score = 77.0 bits (188), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 88/152 (57%), Gaps = 3/152 (1%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SD+IEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + ++ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDSIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150


>gi|27734357|gb|AAM51207.1| polyubiquitin [Cercomonas edax]
 gi|27734367|gb|AAM51212.1| polyubiquitin [Cercomonas edax]
          Length = 177

 Score = 89.7 bits (221), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 61/174 (35%), Positives = 98/174 (56%), Gaps = 8/174 (4%)

Query: 73  KTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMI 132
           KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   NI  E TL ++
Sbjct: 4   KTITLDVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 63

Query: 133 SVPK--ELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQ 189
              +     +IFV+T T  T+ L+V  + T+ +VK+ ++  +  IP +   L   G+QL+
Sbjct: 64  LRLRGGSGMQIFVKTLTGKTITLDVESSDTIENVKQKIQD-KEGIPPDQQRLIFAGKQLE 122

Query: 190 NLKTLAYYDIKENEVLQIIRHVKHS----IFVKLLNGRYIILEVAKFDTVRDVK 239
           + +TLA Y+I++   L ++  ++      IFVK L G+ I L+V   DT+ +VK
Sbjct: 123 DGRTLADYNIQKESTLHLVLRLRGGSGMQIFVKTLTGKTITLDVESSDTIENVK 176



 Score = 88.2 bits (217), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 51/137 (37%), Positives = 82/137 (59%), Gaps = 5/137 (3%)

Query: 149 TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQII 208
           T+ L+V  + T+ +VK+ ++  +  IP +   L   G+QL++ +TLA Y+I++   L ++
Sbjct: 5   TITLDVESSDTIENVKQKIQD-KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 63

Query: 209 RHVKHS----IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLED 264
             ++      IFVK L G+ I L+V   DT+ +VK K+  + G  PD QRL+F  +QLED
Sbjct: 64  LRLRGGSGMQIFVKTLTGKTITLDVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLED 123

Query: 265 DRNLASYKIVNESIVNL 281
            R LA Y I  ES ++L
Sbjct: 124 GRTLADYNIQKESTLHL 140



 Score = 84.0 bits (206), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 63/174 (36%), Positives = 96/174 (55%), Gaps = 13/174 (7%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---- 56
           + V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 8   LDVESSDTIENVKQKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 65

Query: 57  --NDSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIES 114
               SG M+++ KT +  KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E 
Sbjct: 66  LRGGSG-MQIFVKTLTG-KTITLDVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLED 123

Query: 115 YITLDVLNINNEDTLQMISVPK--ELQEIFVQTPTS-TVKLEVRRAHTVLDVKK 165
             TL   NI  E TL ++   +     +IFV+T T  T+ L+V  + T+ +VK+
Sbjct: 124 GRTLADYNIQKESTLHLVLRLRGGSGMQIFVKTLTGKTITLDVESSDTIENVKQ 177



 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 29/62 (46%), Positives = 39/62 (62%)

Query: 220 LNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIV 279
           L G+ I L+V   DT+ +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES +
Sbjct: 1   LTGKTITLDVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL 60

Query: 280 NL 281
           +L
Sbjct: 61  HL 62


>gi|71020945|ref|XP_760703.1| hypothetical protein UM04556.1 [Ustilago maydis 521]
 gi|46100297|gb|EAK85530.1| hypothetical protein UM04556.1 [Ustilago maydis 521]
          Length = 286

 Score = 89.4 bits (220), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 56/145 (38%), Positives = 88/145 (60%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TL+ Y+
Sbjct: 60  QIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYN 118

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+
Sbjct: 119 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 178

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F  +QLED R L+ Y I  ES ++L
Sbjct: 179 FAGKQLEDGRTLSDYNIQKESTLHL 203



 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/190 (30%), Positives = 98/190 (51%), Gaps = 12/190 (6%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 59  MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 117

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 118 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 176

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSIFVKLLNGRYIILEVAKFDTVRDVKD 240
           L   G+QL++ +TL+ Y+I++   L ++  ++     +  NG           T    KD
Sbjct: 177 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGAKKRCQNG---------AGTDGQCKD 227

Query: 241 KLFREIGQAP 250
                +G+ P
Sbjct: 228 AAINLVGECP 237



 Score = 78.2 bits (191), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 49/135 (36%), Positives = 77/135 (57%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 73  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 130

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 131 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 189

Query: 118 LDVLNINNEDTLQMI 132
           L   NI  E TL ++
Sbjct: 190 LSDYNIQKESTLHLV 204


>gi|27734361|gb|AAM51209.1| polyubiquitin [Cercomonas edax]
          Length = 177

 Score = 89.4 bits (220), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 61/174 (35%), Positives = 98/174 (56%), Gaps = 8/174 (4%)

Query: 73  KTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMI 132
           KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   NI  E TL ++
Sbjct: 4   KTITLDVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 63

Query: 133 SVPK--ELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQ 189
              +     +IFV+T T  T+ L+V  + T+ +VK+ ++  +  IP +   L   G+QL+
Sbjct: 64  LRLRGGSGMQIFVKTLTGKTITLDVESSDTIENVKQKIQD-KEGIPPDQQRLIFAGKQLE 122

Query: 190 NLKTLAYYDIKENEVLQIIRHVKHS----IFVKLLNGRYIILEVAKFDTVRDVK 239
           + +TLA Y+I++   L ++  ++      IFVK L G+ I L+V   DT+ +VK
Sbjct: 123 DGRTLADYNIQKESTLHLVLRLRGGSGMQIFVKTLTGKTITLDVESSDTIGNVK 176



 Score = 88.2 bits (217), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 51/137 (37%), Positives = 82/137 (59%), Gaps = 5/137 (3%)

Query: 149 TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQII 208
           T+ L+V  + T+ +VK+ ++  +  IP +   L   G+QL++ +TLA Y+I++   L ++
Sbjct: 5   TITLDVESSDTIENVKQKIQD-KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 63

Query: 209 RHVKHS----IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLED 264
             ++      IFVK L G+ I L+V   DT+ +VK K+  + G  PD QRL+F  +QLED
Sbjct: 64  LRLRGGSGMQIFVKTLTGKTITLDVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLED 123

Query: 265 DRNLASYKIVNESIVNL 281
            R LA Y I  ES ++L
Sbjct: 124 GRTLADYNIQKESTLHL 140



 Score = 84.0 bits (206), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 63/174 (36%), Positives = 96/174 (55%), Gaps = 13/174 (7%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---- 56
           + V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 8   LDVESSDTIENVKQKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 65

Query: 57  --NDSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIES 114
               SG M+++ KT +  KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E 
Sbjct: 66  LRGGSG-MQIFVKTLTG-KTITLDVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLED 123

Query: 115 YITLDVLNINNEDTLQMISVPK--ELQEIFVQTPTS-TVKLEVRRAHTVLDVKK 165
             TL   NI  E TL ++   +     +IFV+T T  T+ L+V  + T+ +VK+
Sbjct: 124 GRTLADYNIQKESTLHLVLRLRGGSGMQIFVKTLTGKTITLDVESSDTIGNVKQ 177



 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 29/62 (46%), Positives = 39/62 (62%)

Query: 220 LNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIV 279
           L G+ I L+V   DT+ +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES +
Sbjct: 1   LTGKTITLDVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL 60

Query: 280 NL 281
           +L
Sbjct: 61  HL 62


>gi|167519655|ref|XP_001744167.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163777253|gb|EDQ90870.1| predicted protein [Monosiga brevicollis MX1]
          Length = 153

 Score = 89.4 bits (220), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 54/145 (37%), Positives = 89/145 (61%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + ++ +VK  ++  +  IP +   L   G+QL++ +TL+ Y+
Sbjct: 2   QIFVKTLTGKTITLEVEPSDSIENVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    IFVK L+G+ I LEV   D++ +VK K+  + G  PD QRL+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLSGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F  +QLED R L+ Y I  ES ++L
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHL 145



 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 51/135 (37%), Positives = 77/135 (57%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDSIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT S  KT  L+   SD+IEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLSG-KTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMI 132
           L   NI  E TL ++
Sbjct: 132 LSDYNIQKESTLHLV 146



 Score = 74.7 bits (182), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 88/152 (57%), Gaps = 3/152 (1%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SD+IEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T +  T+ LEV  + ++ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLSGKTITLEVEPSDSIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150


>gi|388857763|emb|CCF48657.1| probable polyubiquitin [Ustilago hordei]
          Length = 228

 Score = 89.4 bits (220), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 56/145 (38%), Positives = 88/145 (60%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TL+ Y+
Sbjct: 2   QIFVKTLTGKTITLEVEPSDTIDNVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F  +QLED R L+ Y I  ES ++L
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHL 145



 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/190 (30%), Positives = 98/190 (51%), Gaps = 12/190 (6%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSIFVKLLNGRYIILEVAKFDTVRDVKD 240
           L   G+QL++ +TL+ Y+I++   L ++  ++     +  NG           T    KD
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGAKKRCQNG---------AGTDGQCKD 169

Query: 241 KLFREIGQAP 250
                +G+ P
Sbjct: 170 AAINLVGECP 179



 Score = 78.2 bits (191), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 49/135 (36%), Positives = 77/135 (57%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMI 132
           L   NI  E TL ++
Sbjct: 132 LSDYNIQKESTLHLV 146


>gi|357016993|gb|AET50525.1| hypothetical protein [Eimeria tenella]
          Length = 153

 Score = 89.0 bits (219), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 54/145 (37%), Positives = 88/145 (60%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP +   L   G+QL++ +TL+ Y+
Sbjct: 2   QIFVKTLTGKTITLDVEPSDTIENVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    IFVK L G+ I L+V   DT+ +VK K+  + G  PD QRL+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F  +QLED R L+ Y I  ES ++L
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHL 145



 Score = 78.2 bits (191), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 51/135 (37%), Positives = 75/135 (55%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LDVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMI 132
           L   NI  E TL ++
Sbjct: 132 LSDYNIQKESTLHLV 146



 Score = 77.4 bits (189), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 50/155 (32%), Positives = 88/155 (56%), Gaps = 3/155 (1%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSI 215
           L   G+QL++ +TL+ Y+I++   L ++  ++  +
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 153


>gi|384497521|gb|EIE88012.1| polyubiquitin [Rhizopus delemar RA 99-880]
          Length = 231

 Score = 89.0 bits (219), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 55/145 (37%), Positives = 88/145 (60%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + ++ +VK+ ++     IP +   L   G+QL++ +TL+ Y+
Sbjct: 2   QIFVKTLTGKTITLEVESSDSIDNVKQKIQDKEG-IPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F  +QLED R L+ Y I  ES ++L
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHL 145



 Score = 78.2 bits (191), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 49/135 (36%), Positives = 77/135 (57%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDSIDNVKQKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMI 132
           L   NI  E TL ++
Sbjct: 132 LSDYNIQKESTLHLV 146



 Score = 74.3 bits (181), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 49/148 (33%), Positives = 85/148 (57%), Gaps = 3/148 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SD+I+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++     IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEG-IPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQII 208
           L   G+QL++ +TL+ Y+I++   L ++
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLV 146


>gi|218198733|gb|EEC81160.1| hypothetical protein OsI_24083 [Oryza sativa Indica Group]
 gi|222636075|gb|EEE66207.1| hypothetical protein OsJ_22339 [Oryza sativa Japonica Group]
          Length = 240

 Score = 89.0 bits (219), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 56/145 (38%), Positives = 86/145 (59%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TLA Y+
Sbjct: 55  QIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLADYN 113

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    IFVK L G+ I L V   D + +VK K+  + G  PD QRL+
Sbjct: 114 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLAVESSDKIDNVKAKIQDKEGIPPDQQRLI 173

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F  +QLED R LA Y I  ES ++L
Sbjct: 174 FADKQLEDGRTLADYNIQKESTLHL 198



 Score = 71.6 bits (174), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 47/135 (34%), Positives = 74/135 (54%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 68  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 125

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L    SD I+N+K  I+ +EGIP  +  + +  K +E   T
Sbjct: 126 LRGGMQIFVKTLTG-KTITLAVESSDKIDNVKAKIQDKEGIPPDQQRLIFADKQLEDGRT 184

Query: 118 LDVLNINNEDTLQMI 132
           L   NI  E TL ++
Sbjct: 185 LADYNIQKESTLHLV 199



 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 50/169 (29%), Positives = 91/169 (53%), Gaps = 6/169 (3%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 54  MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 112

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ L V  +  + +VK  ++  +  IP +   
Sbjct: 113 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLAVESSDKIDNVKAKIQD-KEGIPPDQQR 171

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSIFVKLL---NGRYII 226
           L    +QL++ +TLA Y+I++   L ++  ++ +   +      GR++ 
Sbjct: 172 LIFADKQLEDGRTLADYNIQKESTLHLVLRLRVAGRFRCFATPGGRWLC 220


>gi|90075190|dbj|BAE87275.1| unnamed protein product [Macaca fascicularis]
          Length = 157

 Score = 89.0 bits (219), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 55/145 (37%), Positives = 87/145 (60%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TL+ Y+
Sbjct: 2   QIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    IFVK L G+ I LEV   D + +VK K+  + G  PD QRL+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDIIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F  +QLED R L+ Y I  ES ++L
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHL 145



 Score = 76.6 bits (187), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 50/135 (37%), Positives = 76/135 (56%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SD IEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDIIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMI 132
           L   NI  E TL ++
Sbjct: 132 LSDYNIQKESTLHLV 146



 Score = 75.9 bits (185), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 50/153 (32%), Positives = 87/153 (56%), Gaps = 3/153 (1%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  +  + +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDIIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKH 213
           L   G+QL++ +TL+ Y+I++   L ++  ++ 
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRR 151


>gi|294942504|ref|XP_002783557.1| Ubiquitin D, putative [Perkinsus marinus ATCC 50983]
 gi|239896054|gb|EER15353.1| Ubiquitin D, putative [Perkinsus marinus ATCC 50983]
          Length = 163

 Score = 88.6 bits (218), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 54/145 (37%), Positives = 88/145 (60%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP +   L   G+QL++ +TL+ Y+
Sbjct: 2   QIFVKTLTGKTITLDVEASDTIENVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    IFVK L G+ I L+V   DT+ +VK K+  + G  PD QRL+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F  +QLED R L+ Y I  ES ++L
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHL 145



 Score = 81.3 bits (199), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 52/161 (32%), Positives = 91/161 (56%), Gaps = 3/161 (1%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSIFVKLLN 221
           L   G+QL++ +TL+ Y+I++   L ++  ++    V +L+
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGCLVSILS 159



 Score = 78.6 bits (192), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 51/135 (37%), Positives = 75/135 (55%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LDVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMI 132
           L   NI  E TL ++
Sbjct: 132 LSDYNIQKESTLHLV 146


>gi|384495224|gb|EIE85715.1| polyubiquitin [Rhizopus delemar RA 99-880]
          Length = 230

 Score = 88.6 bits (218), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 55/145 (37%), Positives = 88/145 (60%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + ++ +VK+ ++     IP +   L   G+QL++ +TL+ Y+
Sbjct: 2   QIFVKTLTGKTITLEVESSDSIDNVKQKIQDKEG-IPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F  +QLED R L+ Y I  ES ++L
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHL 145



 Score = 78.2 bits (191), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 49/135 (36%), Positives = 77/135 (57%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDSIDNVKQKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMI 132
           L   NI  E TL ++
Sbjct: 132 LSDYNIQKESTLHLV 146



 Score = 74.3 bits (181), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 49/148 (33%), Positives = 85/148 (57%), Gaps = 3/148 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SD+I+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++     IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEG-IPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQII 208
           L   G+QL++ +TL+ Y+I++   L ++
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLV 146


>gi|164510220|emb|CAJ41450.1| ubiquitin [Alvinella caudata]
          Length = 152

 Score = 88.6 bits (218), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 54/145 (37%), Positives = 84/145 (57%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  +  + +VK  ++  +  IP +   L   G+QL++ +TL  Y+
Sbjct: 2   QIFVKTLTGKTITLEVEASDNIENVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLGDYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    IFVK L G+ I LEV   D + +VK K+  + G  PD QRL+
Sbjct: 61  IQKESTLHLVPRLRGGMQIFVKTLTGKTITLEVEASDNIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F  +QLED R L  Y I  ES ++L
Sbjct: 121 FAGKQLEDGRTLGDYNIQKESTLHL 145



 Score = 77.0 bits (188), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 50/135 (37%), Positives = 76/135 (56%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEASDNIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLGDYNIQKESTLHLVPR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SD IEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEASDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMI 132
           L   NI  E TL ++
Sbjct: 132 LGDYNIQKESTLHLV 146



 Score = 76.3 bits (186), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 49/154 (31%), Positives = 85/154 (55%), Gaps = 3/154 (1%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SD IEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEASDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLGDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  +  + +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVPRLRGGMQIFVKTLTGKTITLEVEASDNIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
           L   G+QL++ +TL  Y+I++   L ++  ++  
Sbjct: 119 LIFAGKQLEDGRTLGDYNIQKESTLHLVLRLRGG 152


>gi|27734329|gb|AAM51193.1| polyubiquitin [Haynesina germanica]
          Length = 175

 Score = 88.2 bits (217), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 60/172 (34%), Positives = 96/172 (55%), Gaps = 6/172 (3%)

Query: 73  KTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMI 132
           KT  L    +DTI+N+K  I+ +EGIP  +  + + GK +E   TL   NI  E TL ++
Sbjct: 4   KTITLDVEPNDTIQNVKAKIQDKEGIPPEQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 63

Query: 133 -SVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQN 190
             +     +IFV+T T  T+ L+V    T+ +VK  ++  +  IP E   L   G+QL++
Sbjct: 64  LRLRGGAMQIFVKTLTGKTITLDVEPNDTIQNVKAKIQD-KEGIPPEQQRLIFAGKQLED 122

Query: 191 LKTLAYYDIKENEVLQII---RHVKHSIFVKLLNGRYIILEVAKFDTVRDVK 239
            +TL+ Y+I++   L ++   R     IFVK L G+ I L+V   DT+++VK
Sbjct: 123 GRTLSDYNIQKESTLHLVLRLRGGAMQIFVKTLTGKTITLDVEPNDTIQNVK 174



 Score = 83.2 bits (204), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 50/136 (36%), Positives = 80/136 (58%), Gaps = 4/136 (2%)

Query: 149 TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQII 208
           T+ L+V    T+ +VK  ++  +  IP E   L   G+QL++ +TL+ Y+I++   L ++
Sbjct: 5   TITLDVEPNDTIQNVKAKIQD-KEGIPPEQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 63

Query: 209 ---RHVKHSIFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDD 265
              R     IFVK L G+ I L+V   DT+++VK K+  + G  P+ QRL+F  +QLED 
Sbjct: 64  LRLRGGAMQIFVKTLTGKTITLDVEPNDTIQNVKAKIQDKEGIPPEQQRLIFAGKQLEDG 123

Query: 266 RNLASYKIVNESIVNL 281
           R L+ Y I  ES ++L
Sbjct: 124 RTLSDYNIQKESTLHL 139



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 58/170 (34%), Positives = 92/170 (54%), Gaps = 9/170 (5%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---- 56
           + V+  + I+ +K +I  K  E I  +   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 8   LDVEPNDTIQNVKAKIQDK--EGIPPEQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 65

Query: 57  NDSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYI 116
              G M+++ KT +  KT  L    +DTI+N+K  I+ +EGIP  +  + + GK +E   
Sbjct: 66  LRGGAMQIFVKTLTG-KTITLDVEPNDTIQNVKAKIQDKEGIPPEQQRLIFAGKQLEDGR 124

Query: 117 TLDVLNINNEDTLQMI-SVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVK 164
           TL   NI  E TL ++  +     +IFV+T T  T+ L+V    T+ +VK
Sbjct: 125 TLSDYNIQKESTLHLVLRLRGGAMQIFVKTLTGKTITLDVEPNDTIQNVK 174



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/62 (43%), Positives = 40/62 (64%)

Query: 220 LNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIV 279
           L G+ I L+V   DT+++VK K+  + G  P+ QRL+F  +QLED R L+ Y I  ES +
Sbjct: 1   LTGKTITLDVEPNDTIQNVKAKIQDKEGIPPEQQRLIFAGKQLEDGRTLSDYNIQKESTL 60

Query: 280 NL 281
           +L
Sbjct: 61  HL 62


>gi|323451976|gb|EGB07851.1| ubiquitin [Aureococcus anophagefferens]
          Length = 153

 Score = 88.2 bits (217), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 53/145 (36%), Positives = 89/145 (61%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ L+V  + T+ +VK+ ++  +  IP +   L   G+QL++ +TL+ Y+
Sbjct: 2   QIFVKTLTGKTITLDVEPSDTIDNVKQKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    IFVK L G+ I L+V   D++ +VK K+  + G  PD QRL+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDSIDNVKQKIQDKEGIPPDQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F  +QLED R L+ Y I  ES ++L
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHL 145



 Score = 74.3 bits (181), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 88/152 (57%), Gaps = 3/152 (1%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L    SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ L+V  + ++ +VK+ ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDSIDNVKQKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150



 Score = 73.6 bits (179), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 48/135 (35%), Positives = 75/135 (55%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LDVEPSDTIDNVKQKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L    SD+I+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLDVEPSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMI 132
           L   NI  E TL ++
Sbjct: 132 LSDYNIQKESTLHLV 146


>gi|320162850|gb|EFW39749.1| polyubiquitin 5 [Capsaspora owczarzaki ATCC 30864]
          Length = 218

 Score = 87.8 bits (216), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 54/145 (37%), Positives = 87/145 (60%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ L+V  + T+ +VK  ++     IP +   L   G+QL++ +TL+ Y+
Sbjct: 2   QIFVKTLTGKTITLDVESSDTIENVKAKIQDKEG-IPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    IFVK L G+ I L+V   DT+ +VK K+  + G  PD QRL+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVESSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F  +QLED R L+ Y I  ES ++L
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHL 145



 Score = 80.1 bits (196), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 51/135 (37%), Positives = 75/135 (55%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LDVESSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLDVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMI 132
           L   NI  E TL ++
Sbjct: 132 LSDYNIQKESTLHLV 146



 Score = 76.6 bits (187), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 50/148 (33%), Positives = 84/148 (56%), Gaps = 3/148 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLDVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK  ++     IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVESSDTIENVKAKIQDKEG-IPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQII 208
           L   G+QL++ +TL+ Y+I++   L ++
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLV 146


>gi|297606344|ref|NP_001058338.2| Os06g0673500 [Oryza sativa Japonica Group]
 gi|52077254|dbj|BAD46297.1| pentameric polyubiquitin-like [Oryza sativa Japonica Group]
 gi|52077458|dbj|BAD46688.1| pentameric polyubiquitin-like [Oryza sativa Japonica Group]
 gi|255677314|dbj|BAF20252.2| Os06g0673500 [Oryza sativa Japonica Group]
          Length = 187

 Score = 87.8 bits (216), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 56/145 (38%), Positives = 86/145 (59%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TLA Y+
Sbjct: 2   QIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    IFVK L G+ I L V   D + +VK K+  + G  PD QRL+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLAVESSDKIDNVKAKIQDKEGIPPDQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F  +QLED R LA Y I  ES ++L
Sbjct: 121 FADKQLEDGRTLADYNIQKESTLHL 145



 Score = 71.6 bits (174), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 47/135 (34%), Positives = 74/135 (54%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L    SD I+N+K  I+ +EGIP  +  + +  K +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLAVESSDKIDNVKAKIQDKEGIPPDQQRLIFADKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMI 132
           L   NI  E TL ++
Sbjct: 132 LADYNIQKESTLHLV 146



 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 50/169 (29%), Positives = 91/169 (53%), Gaps = 6/169 (3%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ L V  +  + +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLAVESSDKIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSIFVKLL---NGRYII 226
           L    +QL++ +TLA Y+I++   L ++  ++ +   +      GR++ 
Sbjct: 119 LIFADKQLEDGRTLADYNIQKESTLHLVLRLRVAGRFRCFATPGGRWLC 167


>gi|395536787|ref|XP_003770393.1| PREDICTED: polyubiquitin-C-like, partial [Sarcophilus harrisii]
          Length = 243

 Score = 87.8 bits (216), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 58/165 (35%), Positives = 94/165 (56%), Gaps = 4/165 (2%)

Query: 77  LKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMISVPK 136
           L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   NI  E TL ++   +
Sbjct: 68  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 127

Query: 137 ELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLA 195
              +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TL+
Sbjct: 128 GGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLS 186

Query: 196 YYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
            Y+I++   L ++  ++    IFVK L G+ I LEV   D V ++
Sbjct: 187 DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPXDIVENI 231



 Score = 85.9 bits (211), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 60/158 (37%), Positives = 90/158 (56%), Gaps = 7/158 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 68  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 125

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 126 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 184

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEV 154
           L   NI  E TL ++   +   +IFV+T T  T+ LEV
Sbjct: 185 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEV 222



 Score = 85.1 bits (209), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 50/134 (37%), Positives = 80/134 (59%), Gaps = 3/134 (2%)

Query: 150 VKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIR 209
           + LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TL+ Y+I++   L ++ 
Sbjct: 66  ITLEVEPSDTIENVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 124

Query: 210 HVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRN 267
            ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+F  +QLED R 
Sbjct: 125 RLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 184

Query: 268 LASYKIVNESIVNL 281
           L+ Y I  ES ++L
Sbjct: 185 LSDYNIQKESTLHL 198



 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 55/98 (56%), Gaps = 6/98 (6%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 144 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 201

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVR 95
             G M+++ KT +  KT  L+    D +ENI   ++VR
Sbjct: 202 LRGGMQIFVKTLTG-KTITLEVEPXDIVENILVQLQVR 238


>gi|223942441|gb|ACN25304.1| unknown [Zea mays]
 gi|414871092|tpg|DAA49649.1| TPA: putative ubiquitin family protein [Zea mays]
          Length = 314

 Score = 87.8 bits (216), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 73/246 (29%), Positives = 126/246 (51%), Gaps = 14/246 (5%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVI--HND 58
           + VK T+ I+++K +I A   E I     ELF+AG  LE    + DY I  NS +  +  
Sbjct: 23  LDVKSTDTIDQIKSKIGAL--EGIDNSQQELFFAGSHLEKDNRLADYNIMTNSCVDLYVT 80

Query: 59  SGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITL 118
            G M++    PS  KT +L   +S ++ ++K +IE   GIP+ E  + +G + +E    L
Sbjct: 81  DG-MQISVSIPSVWKTIKLNVMKSQSVADVKAMIEQMGGIPLDEQILMHGCQKLEDNKLL 139

Query: 119 DVLNINNEDTLQMISVPKELQEIFVQTPT-STVKLEVRRAHTVLDVKKMVESMRICIPSE 177
               ++N  TL ++  P +   I V      T+ L+V+  +TV DVK M++++   +P+ 
Sbjct: 140 SQCGLSNGHTLHVLVRPTDRLHISVDVDGEETLNLDVKSWYTVADVKLMIDTLE-GLPAR 198

Query: 178 DCELFR---GGEQ--LQNLKTLAYYDIKENEVLQIIRHVKHSIFVKLLNGRYIILEVAKF 232
              L     GG    L++++TL    IK N+++ +   V  + FVK   GR ++L +   
Sbjct: 199 TQILMHTQPGGANTVLKDIETLQNQGIKNNDIVALYHKV--NFFVKTYEGRNLVLSMRTC 256

Query: 233 DTVRDV 238
           DT  ++
Sbjct: 257 DTAEEI 262



 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 44/169 (26%), Positives = 80/169 (47%), Gaps = 3/169 (1%)

Query: 73  KTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMI 132
           KT  L    +DTI+ IK  I   EGI   + ++++ G  +E    L   NI     + + 
Sbjct: 19  KTVLLDVKSTDTIDQIKSKIGALEGIDNSQQELFFAGSHLEKDNRLADYNIMTNSCVDLY 78

Query: 133 SVPKELQEIFVQTPTSTVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLK 192
                   + + +   T+KL V ++ +V DVK M+E M   IP ++  L  G ++L++ K
Sbjct: 79  VTDGMQISVSIPSVWKTIKLNVMKSQSVADVKAMIEQMG-GIPLDEQILMHGCQKLEDNK 137

Query: 193 TLAYYDIKENEVLQIIRHVKHSIFVKL-LNGRYII-LEVAKFDTVRDVK 239
            L+   +     L ++      + + + ++G   + L+V  + TV DVK
Sbjct: 138 LLSQCGLSNGHTLHVLVRPTDRLHISVDVDGEETLNLDVKSWYTVADVK 186


>gi|226509442|ref|NP_001150268.1| polyubiquitin containing 7 ubiquitin monomers [Zea mays]
 gi|195637954|gb|ACG38445.1| polyubiquitin containing 7 ubiquitin monomers [Zea mays]
          Length = 314

 Score = 87.8 bits (216), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 73/246 (29%), Positives = 126/246 (51%), Gaps = 14/246 (5%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVI--HND 58
           + VK T+ I+++K +I A   E I     ELF+AG  LE    + DY I  NS +  +  
Sbjct: 23  LDVKSTDTIDQIKSKIGAL--EGIDNSQQELFFAGSHLEKDNRLADYNIMTNSCVDLYVT 80

Query: 59  SGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITL 118
            G M++    PS  KT +L   +S ++ ++K +IE   GIP+ E  + +G + +E    L
Sbjct: 81  DG-MQISVSIPSVWKTIKLNVMKSQSVADVKAMIEQMGGIPLDEQILMHGCQKLEDNKLL 139

Query: 119 DVLNINNEDTLQMISVPKELQEIFVQTPT-STVKLEVRRAHTVLDVKKMVESMRICIPSE 177
               ++N  TL ++  P +   I V      T+ L+V+  +TV DVK M++++   +P+ 
Sbjct: 140 SQCGLSNGHTLHVLVRPTDRLHISVDVDGEETLNLDVKSWYTVADVKLMIDTLE-GLPAR 198

Query: 178 DCELFR---GGEQ--LQNLKTLAYYDIKENEVLQIIRHVKHSIFVKLLNGRYIILEVAKF 232
              L     GG    L++++TL    IK N+++ +   V  + FVK   GR ++L +   
Sbjct: 199 TQILMHTQPGGANTVLKDIETLQNQGIKNNDIVALYHKV--NFFVKTYEGRNLVLSMRTC 256

Query: 233 DTVRDV 238
           DT  ++
Sbjct: 257 DTAEEI 262



 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 44/169 (26%), Positives = 80/169 (47%), Gaps = 3/169 (1%)

Query: 73  KTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMI 132
           KT  L    +DTI+ IK  I   EGI   + ++++ G  +E    L   NI     + + 
Sbjct: 19  KTVLLDVKSTDTIDQIKSKIGALEGIDNSQQELFFAGSHLEKDNRLADYNIMTNSCVDLY 78

Query: 133 SVPKELQEIFVQTPTSTVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLK 192
                   + + +   T+KL V ++ +V DVK M+E M   IP ++  L  G ++L++ K
Sbjct: 79  VTDGMQISVSIPSVWKTIKLNVMKSQSVADVKAMIEQMG-GIPLDEQILMHGCQKLEDNK 137

Query: 193 TLAYYDIKENEVLQIIRHVKHSIFVKL-LNGRYII-LEVAKFDTVRDVK 239
            L+   +     L ++      + + + ++G   + L+V  + TV DVK
Sbjct: 138 LLSQCGLSNGHTLHVLVRPTDRLHISVDVDGEETLNLDVKSWYTVADVK 186


>gi|1321735|emb|CAA64326.1| ubiquitin [Carabus alpestris]
          Length = 139

 Score = 87.8 bits (216), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 53/137 (38%), Positives = 83/137 (60%), Gaps = 4/137 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TL+ Y+
Sbjct: 2   QIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 FKRQQLEDDRNLASYKI 273
           F  +QLED R L+ Y I
Sbjct: 121 FAGKQLEDGRTLSDYNI 137



 Score = 75.5 bits (184), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 50/141 (35%), Positives = 83/141 (58%), Gaps = 3/141 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKE 201
           L   G+QL++ +TL+ Y+I++
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQK 139



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 48/127 (37%), Positives = 72/127 (56%), Gaps = 6/127 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNIN 124
           L   NI 
Sbjct: 132 LSDYNIQ 138



 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/67 (49%), Positives = 43/67 (64%)

Query: 215 IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIV 274
           IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+F  +QLED R L+ Y I 
Sbjct: 3   IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 62

Query: 275 NESIVNL 281
            ES ++L
Sbjct: 63  KESTLHL 69


>gi|27734379|gb|AAM51218.1| polyubiquitin [Cercomonas sp. ATCC 50316]
          Length = 177

 Score = 87.4 bits (215), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 61/174 (35%), Positives = 96/174 (55%), Gaps = 8/174 (4%)

Query: 73  KTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMI 132
           KT  L A  SDTIE +K  I+ +EGIP  +  + + GK +E   TL   NI  E TL ++
Sbjct: 4   KTITLDAESSDTIETVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 63

Query: 133 SVPK--ELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQ 189
              +     +IFV+T T  T+ L+V  + T+  VK+ ++  +  IP +   L   G+QL+
Sbjct: 64  LRLRGGSGMQIFVKTLTGKTITLDVESSDTIETVKQKIQD-KEGIPPDQQRLIFAGKQLE 122

Query: 190 NLKTLAYYDIKENEVLQIIRHVKHS----IFVKLLNGRYIILEVAKFDTVRDVK 239
           + +TLA Y+I++   L ++  ++      IFVK L G+ I L+V   DT+  VK
Sbjct: 123 DGRTLADYNIQKESTLHLVLRLRGGSGMQIFVKTLTGKTITLDVESSDTIETVK 176



 Score = 85.1 bits (209), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 50/137 (36%), Positives = 79/137 (57%), Gaps = 5/137 (3%)

Query: 149 TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQII 208
           T+ L+   + T+  VK+ ++  +  IP +   L   G+QL++ +TLA Y+I++   L ++
Sbjct: 5   TITLDAESSDTIETVKQKIQD-KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 63

Query: 209 RHVKHS----IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLED 264
             ++      IFVK L G+ I L+V   DT+  VK K+  + G  PD QRL+F  +QLED
Sbjct: 64  LRLRGGSGMQIFVKTLTGKTITLDVESSDTIETVKQKIQDKEGIPPDQQRLIFAGKQLED 123

Query: 265 DRNLASYKIVNESIVNL 281
            R LA Y I  ES ++L
Sbjct: 124 GRTLADYNIQKESTLHL 140



 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 61/174 (35%), Positives = 93/174 (53%), Gaps = 13/174 (7%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---- 56
           +  + ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 8   LDAESSDTIETVKQKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 65

Query: 57  --NDSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIES 114
               SG M+++ KT +  KT  L    SDTIE +K  I+ +EGIP  +  + + GK +E 
Sbjct: 66  LRGGSG-MQIFVKTLTG-KTITLDVESSDTIETVKQKIQDKEGIPPDQQRLIFAGKQLED 123

Query: 115 YITLDVLNINNEDTLQMISVPK--ELQEIFVQTPTS-TVKLEVRRAHTVLDVKK 165
             TL   NI  E TL ++   +     +IFV+T T  T+ L+V  + T+  VK+
Sbjct: 124 GRTLADYNIQKESTLHLVLRLRGGSGMQIFVKTLTGKTITLDVESSDTIETVKQ 177



 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 28/62 (45%), Positives = 37/62 (59%)

Query: 220 LNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIV 279
           L G+ I L+    DT+  VK K+  + G  PD QRL+F  +QLED R LA Y I  ES +
Sbjct: 1   LTGKTITLDAESSDTIETVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL 60

Query: 280 NL 281
           +L
Sbjct: 61  HL 62


>gi|2641213|gb|AAB86858.1| polyubiquitin, partial [Schizophyllum commune]
          Length = 139

 Score = 87.4 bits (215), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 53/137 (38%), Positives = 83/137 (60%), Gaps = 4/137 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TL+ Y+
Sbjct: 2   QIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 257 FKRQQLEDDRNLASYKI 273
           F  +QLED R L+ Y I
Sbjct: 121 FAGKQLEDGRTLSDYNI 137



 Score = 75.5 bits (184), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 49/141 (34%), Positives = 83/141 (58%), Gaps = 3/141 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKE 201
           L   G+QL++ +TL+ Y+I++
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQK 139



 Score = 71.2 bits (173), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 46/126 (36%), Positives = 72/126 (57%), Gaps = 6/126 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNI 123
           L   NI
Sbjct: 132 LSDYNI 137



 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/67 (49%), Positives = 43/67 (64%)

Query: 215 IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIV 274
           IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+F  +QLED R L+ Y I 
Sbjct: 3   IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 62

Query: 275 NESIVNL 281
            ES ++L
Sbjct: 63  KESTLHL 69


>gi|4150914|emb|CAA72800.1| polyubiquitin precursor [Suberites domuncula]
          Length = 147

 Score = 87.4 bits (215), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 51/135 (37%), Positives = 81/135 (60%), Gaps = 3/135 (2%)

Query: 149 TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQII 208
           T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TL+ Y+I++   L ++
Sbjct: 6   TITLEVEASDTIENVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 64

Query: 209 RHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDR 266
             ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+F  +QLED R
Sbjct: 65  LRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 124

Query: 267 NLASYKIVNESIVNL 281
            L+ Y I  ES ++L
Sbjct: 125 TLSDYNIQKESTLHL 139



 Score = 79.7 bits (195), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 51/135 (37%), Positives = 77/135 (57%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 9   LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 66

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 67  LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 125

Query: 118 LDVLNINNEDTLQMI 132
           L   NI  E TL ++
Sbjct: 126 LSDYNIQKESTLHLV 140



 Score = 76.3 bits (186), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 48/141 (34%), Positives = 81/141 (57%), Gaps = 2/141 (1%)

Query: 73  KTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMI 132
           KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   NI  E TL ++
Sbjct: 5   KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 64

Query: 133 SVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNL 191
              +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ 
Sbjct: 65  LRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPPDQQRLIFAGKQLEDG 123

Query: 192 KTLAYYDIKENEVLQIIRHVK 212
           +TL+ Y+I++   L ++  ++
Sbjct: 124 RTLSDYNIQKESTLHLVLRLR 144



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/62 (46%), Positives = 39/62 (62%)

Query: 220 LNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIV 279
           L G+ I LEV   DT+ +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES +
Sbjct: 2   LTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 61

Query: 280 NL 281
           +L
Sbjct: 62  HL 63


>gi|92790162|emb|CAI83750.1| Polyubiqutin 4 [Isotricha prostoma]
          Length = 143

 Score = 87.4 bits (215), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 51/135 (37%), Positives = 82/135 (60%), Gaps = 3/135 (2%)

Query: 149 TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQII 208
           T+ L+V  + T+ +VK  ++  +  IP +   L   G+QL++ +TLA Y+I++   L ++
Sbjct: 2   TITLDVEPSDTIENVKAKIQD-KEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLV 60

Query: 209 RHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDR 266
             ++    IFVK L G+ I L+V   DT+ +VK K+  + G  PD QRL+F  +QLED+R
Sbjct: 61  LRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNR 120

Query: 267 NLASYKIVNESIVNL 281
            LA Y I  ES ++L
Sbjct: 121 TLADYNIQKESTLHL 135



 Score = 75.5 bits (184), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 50/135 (37%), Positives = 74/135 (54%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ IE +K +I  K  E I  D   L +AG+QLE+  T+ DY I   S +H    
Sbjct: 5   LDVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLR 62

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 63  LRGGMQIFVKTLTG-KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRT 121

Query: 118 LDVLNINNEDTLQMI 132
           L   NI  E TL ++
Sbjct: 122 LADYNIQKESTLHLV 136



 Score = 74.7 bits (182), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 48/137 (35%), Positives = 78/137 (56%), Gaps = 2/137 (1%)

Query: 73  KTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMI 132
           KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   NI  E TL ++
Sbjct: 1   KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLV 60

Query: 133 SVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNL 191
              +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP +   L   G+QL++ 
Sbjct: 61  LRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQD-KEGIPPDQQRLIFAGKQLEDN 119

Query: 192 KTLAYYDIKENEVLQII 208
           +TLA Y+I++   L ++
Sbjct: 120 RTLADYNIQKESTLHLV 136


>gi|2209091|gb|AAB61405.1| ubiquitin [Tetrahymena vorax]
          Length = 153

 Score = 87.4 bits (215), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 54/145 (37%), Positives = 87/145 (60%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP +   L   G+QL++  TL+ Y+
Sbjct: 2   QIFVKTLTGKTITLDVEASDTIENVKAKIQD-KEGIPPDQQRLIFAGKQLEDGITLSDYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    IFVK L G+ I L+V   DT+ +VK K+  + G  PD QRL+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F  +QLED R L+ Y I  ES ++L
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHL 145



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/155 (33%), Positives = 89/155 (57%), Gaps = 3/155 (1%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E  ITL   
Sbjct: 1   MQIFVKTLTG-KTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGITLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSI 215
           L   G+QL++ +TL+ Y+I++   L ++  ++  I
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGI 153



 Score = 80.1 bits (196), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 51/135 (37%), Positives = 76/135 (56%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G+T+ DY I   S +H    
Sbjct: 15  LDVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGITLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMI 132
           L   NI  E TL ++
Sbjct: 132 LSDYNIQKESTLHLV 146


>gi|385881402|gb|AFI98422.1| polyubiquitin-B, partial [Antricola delacruzi]
          Length = 156

 Score = 87.4 bits (215), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 56/146 (38%), Positives = 87/146 (59%), Gaps = 5/146 (3%)

Query: 140 EIFVQTPTS-TVKLEVRRAH-TVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYY 197
           +IFV+T T  T+ LEV     T+ +VK  ++  +  IP +   L   G+QL++ +TL+ Y
Sbjct: 4   QIFVKTLTGKTITLEVEPGSDTIENVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDY 62

Query: 198 DIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRL 255
           +I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL
Sbjct: 63  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 122

Query: 256 VFKRQQLEDDRNLASYKIVNESIVNL 281
           +F  +QLED R L+ Y I  ES ++L
Sbjct: 123 IFAGKQLEDGRTLSDYNIQKESTLHL 148



 Score = 77.0 bits (188), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 50/130 (38%), Positives = 73/130 (56%), Gaps = 6/130 (4%)

Query: 6   TEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---NDSGVM 62
           ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H      G M
Sbjct: 23  SDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 80

Query: 63  KLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLN 122
           +++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   N
Sbjct: 81  QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 139

Query: 123 INNEDTLQMI 132
           I  E TL ++
Sbjct: 140 IQKESTLHLV 149



 Score = 75.9 bits (185), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 51/157 (32%), Positives = 90/157 (57%), Gaps = 4/157 (2%)

Query: 60  GVMKLYFKTPSNEK-TFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITL 118
           G M+++ KT + +  T E++   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL
Sbjct: 1   GGMQIFVKTLTGKTITLEVEPG-SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 59

Query: 119 DVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSE 177
              NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +
Sbjct: 60  SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPD 118

Query: 178 DCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
              L   G+QL++ +TL+ Y+I++   L ++  ++  
Sbjct: 119 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 155


>gi|125575126|gb|EAZ16410.1| hypothetical protein OsJ_31877 [Oryza sativa Japonica Group]
          Length = 322

 Score = 87.0 bits (214), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 69/252 (27%), Positives = 132/252 (52%), Gaps = 11/252 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH-NDS 59
           + V  T+ ++++K ++ A   E I +   E+F+AG  L+N   + DY I  NS +    +
Sbjct: 26  LNVNSTDTVDQIKSKLSAI--EGIDKSKQEMFFAGMHLKNEDKLADYNIMTNSSVDLYVT 83

Query: 60  GVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLD 119
             +++  + PS  KT +L   +S++I +IK  IE  EGI ++E  + Y G+ +E    L 
Sbjct: 84  DAIQISVRIPSVGKTTKLNMRKSNSIADIKAEIEQEEGILMNEQILMYAGQQLEDNQLLS 143

Query: 120 VLNINNEDTLQMISVPKELQEIFVQT-PTSTVKLEVRRAHTVLDVKKMVESMRICIPSED 178
             ++ N+ T  ++  P +   +F+      T+ LE +R +TV DVK M+E++   +P+  
Sbjct: 144 QCDLRNDQTFHVLVCPNDKLHVFINVRGEKTIGLETKRWYTVADVKLMIENLE-GLPACS 202

Query: 179 CELFRG----GEQLQNLKTLAYYDIKENEVLQIIRHVKHSIFVKLLNGRYIILEVAKFDT 234
             L R     G  L + + L    +K N+ L + ++V+   FVK   G+ + + +   DT
Sbjct: 203 QILTRMQSGVGVALTDGRMLQDQHVKNNDTLLLQQNVQ--FFVKSWEGKTLTMVLKTSDT 260

Query: 235 VRDVKDKLFREI 246
            + +KD++  ++
Sbjct: 261 GKQIKDRIAEKL 272



 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 48/182 (26%), Positives = 96/182 (52%), Gaps = 10/182 (5%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           +K+Y K     KTF L  N +DT++ IK  +   EGI   + ++++ G  +++   L   
Sbjct: 14  LKIYVKMM---KTFTLNVNSTDTVDQIKSKLSAIEGIDKSKQEMFFAGMHLKNEDKLADY 70

Query: 122 NINNEDTLQMISVPKELQEIFVQTPT--STVKLEVRRAHTVLDVKKMVESMRICIPSEDC 179
           NI    ++ +  V   +Q I V+ P+   T KL +R+++++ D+K  +E     + +E  
Sbjct: 71  NIMTNSSVDLY-VTDAIQ-ISVRIPSVGKTTKLNMRKSNSIADIKAEIEQEEGILMNEQI 128

Query: 180 ELFRGGEQLQNLKTLAYYDIKENEVLQII--RHVKHSIFVKLLNGRYIILEVAKFDTVRD 237
            L   G+QL++ + L+  D++ ++   ++   + K  +F+ +   + I LE  ++ TV D
Sbjct: 129 -LMYAGQQLEDNQLLSQCDLRNDQTFHVLVCPNDKLHVFINVRGEKTIGLETKRWYTVAD 187

Query: 238 VK 239
           VK
Sbjct: 188 VK 189


>gi|223646258|gb|ACN09887.1| Ubiquitin [Salmo salar]
 gi|223672105|gb|ACN12234.1| Ubiquitin [Salmo salar]
          Length = 191

 Score = 87.0 bits (214), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 51/135 (37%), Positives = 81/135 (60%), Gaps = 3/135 (2%)

Query: 149 TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQII 208
           T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TL+ Y+I++   L ++
Sbjct: 50  TITLEVEPSDTIENVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 108

Query: 209 RHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDR 266
             ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+F  +QLED R
Sbjct: 109 LRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 168

Query: 267 NLASYKIVNESIVNL 281
            L+ Y I  ES ++L
Sbjct: 169 TLSDYNIQKESTLHL 183



 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 51/135 (37%), Positives = 77/135 (57%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 53  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 110

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 111 LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 169

Query: 118 LDVLNINNEDTLQMI 132
           L   NI  E TL ++
Sbjct: 170 LSDYNIQKESTLHLV 184



 Score = 75.1 bits (183), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 48/141 (34%), Positives = 81/141 (57%), Gaps = 2/141 (1%)

Query: 73  KTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMI 132
           KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   NI  E TL ++
Sbjct: 49  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 108

Query: 133 SVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNL 191
              +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ 
Sbjct: 109 LRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQRLIFAGKQLEDG 167

Query: 192 KTLAYYDIKENEVLQIIRHVK 212
           +TL+ Y+I++   L ++  ++
Sbjct: 168 RTLSDYNIQKESTLHLVLRLR 188



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 29/62 (46%), Positives = 39/62 (62%)

Query: 220 LNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIV 279
           L G+ I LEV   DT+ +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES +
Sbjct: 46  LTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 105

Query: 280 NL 281
           +L
Sbjct: 106 HL 107


>gi|125532351|gb|EAY78916.1| hypothetical protein OsI_34017 [Oryza sativa Indica Group]
          Length = 322

 Score = 87.0 bits (214), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 69/252 (27%), Positives = 132/252 (52%), Gaps = 11/252 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH-NDS 59
           + V  T+ ++++K ++ A   E I +   E+F+AG  L+N   + DY I  NS +    +
Sbjct: 26  LNVNGTDTVDQIKSKLSAI--EGIDKSKQEMFFAGMHLKNKDKLADYNIMTNSSVDLYVT 83

Query: 60  GVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLD 119
             +++  + PS  KT +L   +S++I +IK  IE  EGI ++E  + Y G+ +E    L 
Sbjct: 84  DAIQISVRIPSVGKTTKLNMRKSNSIADIKAEIEQEEGILMNEQILMYAGQQLEDNQLLS 143

Query: 120 VLNINNEDTLQMISVPKELQEIFVQT-PTSTVKLEVRRAHTVLDVKKMVESMRICIPSED 178
             ++ N+ T  ++  P +   +F+      T+ LE +R +TV DVK M+E++   +P+  
Sbjct: 144 QCDLRNDQTFHVLVCPNDKLHVFINVRGEKTIGLEAKRWYTVADVKLMIENLE-GLPACS 202

Query: 179 CELFRG----GEQLQNLKTLAYYDIKENEVLQIIRHVKHSIFVKLLNGRYIILEVAKFDT 234
             L R     G  L + + L    +K N+ L + ++V+   FVK   G+ + + +   DT
Sbjct: 203 QILTRMQSGVGVALTDGRMLQDQHVKNNDTLLLQQNVQ--FFVKSWEGKTLTMVLKTSDT 260

Query: 235 VRDVKDKLFREI 246
            + +KD++  ++
Sbjct: 261 GKQIKDRIAEKL 272



 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 48/182 (26%), Positives = 96/182 (52%), Gaps = 10/182 (5%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           +K+Y K     KTF L  N +DT++ IK  +   EGI   + ++++ G  +++   L   
Sbjct: 14  LKIYVKM---MKTFTLNVNGTDTVDQIKSKLSAIEGIDKSKQEMFFAGMHLKNKDKLADY 70

Query: 122 NINNEDTLQMISVPKELQEIFVQTPT--STVKLEVRRAHTVLDVKKMVESMRICIPSEDC 179
           NI    ++ +  V   +Q I V+ P+   T KL +R+++++ D+K  +E     + +E  
Sbjct: 71  NIMTNSSVDLY-VTDAIQ-ISVRIPSVGKTTKLNMRKSNSIADIKAEIEQEEGILMNEQI 128

Query: 180 ELFRGGEQLQNLKTLAYYDIKENEVLQII--RHVKHSIFVKLLNGRYIILEVAKFDTVRD 237
            L   G+QL++ + L+  D++ ++   ++   + K  +F+ +   + I LE  ++ TV D
Sbjct: 129 -LMYAGQQLEDNQLLSQCDLRNDQTFHVLVCPNDKLHVFINVRGEKTIGLEAKRWYTVAD 187

Query: 238 VK 239
           VK
Sbjct: 188 VK 189


>gi|115482500|ref|NP_001064843.1| Os10g0475900 [Oryza sativa Japonica Group]
 gi|16905182|gb|AAL31052.1|AC078893_15 putative polyubiquitin [Oryza sativa Japonica Group]
 gi|31432659|gb|AAP54264.1| Ubiquitin family protein, expressed [Oryza sativa Japonica Group]
 gi|113639452|dbj|BAF26757.1| Os10g0475900 [Oryza sativa Japonica Group]
 gi|215678821|dbj|BAG95258.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 328

 Score = 87.0 bits (214), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 69/252 (27%), Positives = 132/252 (52%), Gaps = 11/252 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH-NDS 59
           + V  T+ ++++K ++ A   E I +   E+F+AG  L+N   + DY I  NS +    +
Sbjct: 32  LNVNSTDTVDQIKSKLSAI--EGIDKSKQEMFFAGMHLKNEDKLADYNIMTNSSVDLYVT 89

Query: 60  GVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLD 119
             +++  + PS  KT +L   +S++I +IK  IE  EGI ++E  + Y G+ +E    L 
Sbjct: 90  DAIQISVRIPSVGKTTKLNMRKSNSIADIKAEIEQEEGILMNEQILMYAGQQLEDNQLLS 149

Query: 120 VLNINNEDTLQMISVPKELQEIFVQT-PTSTVKLEVRRAHTVLDVKKMVESMRICIPSED 178
             ++ N+ T  ++  P +   +F+      T+ LE +R +TV DVK M+E++   +P+  
Sbjct: 150 QCDLRNDQTFHVLVCPNDKLHVFINVRGEKTIGLETKRWYTVADVKLMIENLE-GLPACS 208

Query: 179 CELFRG----GEQLQNLKTLAYYDIKENEVLQIIRHVKHSIFVKLLNGRYIILEVAKFDT 234
             L R     G  L + + L    +K N+ L + ++V+   FVK   G+ + + +   DT
Sbjct: 209 QILTRMQSGVGVALTDGRMLQDQHVKNNDTLLLQQNVQ--FFVKSWEGKTLTMVLKTSDT 266

Query: 235 VRDVKDKLFREI 246
            + +KD++  ++
Sbjct: 267 GKQIKDRIAEKL 278



 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 48/182 (26%), Positives = 96/182 (52%), Gaps = 10/182 (5%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           +K+Y K     KTF L  N +DT++ IK  +   EGI   + ++++ G  +++   L   
Sbjct: 20  LKIYVKM---MKTFTLNVNSTDTVDQIKSKLSAIEGIDKSKQEMFFAGMHLKNEDKLADY 76

Query: 122 NINNEDTLQMISVPKELQEIFVQTPT--STVKLEVRRAHTVLDVKKMVESMRICIPSEDC 179
           NI    ++ +  V   +Q I V+ P+   T KL +R+++++ D+K  +E     + +E  
Sbjct: 77  NIMTNSSVDLY-VTDAIQ-ISVRIPSVGKTTKLNMRKSNSIADIKAEIEQEEGILMNEQI 134

Query: 180 ELFRGGEQLQNLKTLAYYDIKENEVLQII--RHVKHSIFVKLLNGRYIILEVAKFDTVRD 237
            L   G+QL++ + L+  D++ ++   ++   + K  +F+ +   + I LE  ++ TV D
Sbjct: 135 -LMYAGQQLEDNQLLSQCDLRNDQTFHVLVCPNDKLHVFINVRGEKTIGLETKRWYTVAD 193

Query: 238 VK 239
           VK
Sbjct: 194 VK 195


>gi|27734371|gb|AAM51214.1| polyubiquitin [Cercomonas sp. ATCC 50316]
 gi|27734373|gb|AAM51215.1| polyubiquitin [Cercomonas sp. ATCC 50316]
          Length = 177

 Score = 86.7 bits (213), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 51/137 (37%), Positives = 80/137 (58%), Gaps = 5/137 (3%)

Query: 149 TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQII 208
           T+ L+V  + T+  VK+ ++  +  IP +   L   G+QL++ +TLA Y+I++   L ++
Sbjct: 5   TITLDVESSDTIETVKQKIQD-KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 63

Query: 209 RHVKHS----IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLED 264
             ++      IFVK L G+ I L+V   DT+  VK K+  + G  PD QRL+F  +QLED
Sbjct: 64  LRLRGGSGMQIFVKTLTGKTITLDVESSDTIETVKQKIQDKEGIPPDQQRLIFAGKQLED 123

Query: 265 DRNLASYKIVNESIVNL 281
            R LA Y I  ES ++L
Sbjct: 124 GRTLADYNIQKESTLHL 140



 Score = 85.5 bits (210), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 60/174 (34%), Positives = 95/174 (54%), Gaps = 8/174 (4%)

Query: 73  KTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMI 132
           KT  L    SDTIE +K  I+ +EGIP  +  + + GK +E   TL   NI  E TL ++
Sbjct: 4   KTITLDVESSDTIETVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 63

Query: 133 SVPK--ELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQ 189
              +     +IFV+T T  T+ L+V  + T+  VK+ ++  +  IP +   L   G+QL+
Sbjct: 64  LRLRGGSGMQIFVKTLTGKTITLDVESSDTIETVKQKIQD-KEGIPPDQQRLIFAGKQLE 122

Query: 190 NLKTLAYYDIKENEVLQIIRHVKHS----IFVKLLNGRYIILEVAKFDTVRDVK 239
           + +TLA Y+I++   L ++  ++      IFVK L G+ I L+V   DT+  VK
Sbjct: 123 DGRTLADYNIQKESTLHLVLRLRGGSGMQIFVKTLTGKTITLDVESSDTIETVK 176



 Score = 80.5 bits (197), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 62/174 (35%), Positives = 94/174 (54%), Gaps = 13/174 (7%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---- 56
           + V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 8   LDVESSDTIETVKQKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 65

Query: 57  --NDSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIES 114
               SG M+++ KT +  KT  L    SDTIE +K  I+ +EGIP  +  + + GK +E 
Sbjct: 66  LRGGSG-MQIFVKTLTG-KTITLDVESSDTIETVKQKIQDKEGIPPDQQRLIFAGKQLED 123

Query: 115 YITLDVLNINNEDTLQMISVPK--ELQEIFVQTPTS-TVKLEVRRAHTVLDVKK 165
             TL   NI  E TL ++   +     +IFV+T T  T+ L+V  + T+  VK+
Sbjct: 124 GRTLADYNIQKESTLHLVLRLRGGSGMQIFVKTLTGKTITLDVESSDTIETVKQ 177



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/62 (46%), Positives = 38/62 (61%)

Query: 220 LNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIV 279
           L G+ I L+V   DT+  VK K+  + G  PD QRL+F  +QLED R LA Y I  ES +
Sbjct: 1   LTGKTITLDVESSDTIETVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL 60

Query: 280 NL 281
           +L
Sbjct: 61  HL 62


>gi|27734369|gb|AAM51213.1| polyubiquitin [Cercomonas sp. ATCC 50316]
          Length = 177

 Score = 86.7 bits (213), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 51/137 (37%), Positives = 80/137 (58%), Gaps = 5/137 (3%)

Query: 149 TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQII 208
           T+ L+V  + T+  VK+ ++  +  IP +   L   G+QL++ +TLA Y+I++   L ++
Sbjct: 5   TITLDVESSDTIETVKQKIQD-KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 63

Query: 209 RHVKHS----IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLED 264
             ++      IFVK L G+ I L+V   DT+  VK K+  + G  PD QRL+F  +QLED
Sbjct: 64  LRLRGGSGMQIFVKTLTGKTITLDVESSDTIETVKQKIQDKEGIPPDQQRLIFAGRQLED 123

Query: 265 DRNLASYKIVNESIVNL 281
            R LA Y I  ES ++L
Sbjct: 124 GRTLADYNIQKESTLHL 140



 Score = 85.1 bits (209), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 60/174 (34%), Positives = 94/174 (54%), Gaps = 8/174 (4%)

Query: 73  KTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMI 132
           KT  L    SDTIE +K  I+ +EGIP  +  + + GK +E   TL   NI  E TL ++
Sbjct: 4   KTITLDVESSDTIETVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 63

Query: 133 SVPK--ELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQ 189
              +     +IFV+T T  T+ L+V  + T+  VK+ ++  +  IP +   L   G QL+
Sbjct: 64  LRLRGGSGMQIFVKTLTGKTITLDVESSDTIETVKQKIQD-KEGIPPDQQRLIFAGRQLE 122

Query: 190 NLKTLAYYDIKENEVLQIIRHVKHS----IFVKLLNGRYIILEVAKFDTVRDVK 239
           + +TLA Y+I++   L ++  ++      IFVK L G+ I L+V   DT+  VK
Sbjct: 123 DGRTLADYNIQKESTLHLVLRLRGGSGMQIFVKTLTGKTITLDVESSDTIETVK 176



 Score = 79.7 bits (195), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 61/174 (35%), Positives = 94/174 (54%), Gaps = 13/174 (7%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---- 56
           + V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 8   LDVESSDTIETVKQKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 65

Query: 57  --NDSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIES 114
               SG M+++ KT +  KT  L    SDTIE +K  I+ +EGIP  +  + + G+ +E 
Sbjct: 66  LRGGSG-MQIFVKTLTG-KTITLDVESSDTIETVKQKIQDKEGIPPDQQRLIFAGRQLED 123

Query: 115 YITLDVLNINNEDTLQMISVPK--ELQEIFVQTPTS-TVKLEVRRAHTVLDVKK 165
             TL   NI  E TL ++   +     +IFV+T T  T+ L+V  + T+  VK+
Sbjct: 124 GRTLADYNIQKESTLHLVLRLRGGSGMQIFVKTLTGKTITLDVESSDTIETVKQ 177



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/62 (46%), Positives = 38/62 (61%)

Query: 220 LNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIV 279
           L G+ I L+V   DT+  VK K+  + G  PD QRL+F  +QLED R LA Y I  ES +
Sbjct: 1   LTGKTITLDVESSDTIETVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL 60

Query: 280 NL 281
           +L
Sbjct: 61  HL 62


>gi|40647160|gb|AAR88386.1| polyubiquitin 1, partial [Plasmodiophora brassicae]
 gi|40647162|gb|AAR88387.1| polyubiquitin 2, partial [Plasmodiophora brassicae]
          Length = 175

 Score = 86.7 bits (213), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 60/172 (34%), Positives = 92/172 (53%), Gaps = 6/172 (3%)

Query: 73  KTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMI 132
           KT  L  +  DTIE +K  I+ +EGIP  +  + + GK +E   TL   NI  E TL ++
Sbjct: 4   KTITLDVDSGDTIETVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 63

Query: 133 -SVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQN 190
             +     +IFV+T T  T+ L+V    T+  VK  ++  +  IP +   L   G+QL++
Sbjct: 64  LRLRGGTMQIFVKTLTGKTITLDVDSGDTIETVKAKIQD-KEGIPPDQQRLIFAGKQLED 122

Query: 191 LKTLAYYDIKENEVLQII---RHVKHSIFVKLLNGRYIILEVAKFDTVRDVK 239
            +TLA Y+I++   L ++   R     IFVK L G+ I L+V   DT+  VK
Sbjct: 123 GRTLADYNIQKESTLHLVLRLRGGTMQIFVKTLTGKTITLDVDSGDTIETVK 174



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 52/136 (38%), Positives = 77/136 (56%), Gaps = 4/136 (2%)

Query: 149 TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQII 208
           T+ L+V    T+  VK  ++  +  IP +   L   G+QL++ +TLA Y+I++   L ++
Sbjct: 5   TITLDVDSGDTIETVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 63

Query: 209 ---RHVKHSIFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDD 265
              R     IFVK L G+ I L+V   DT+  VK K+  + G  PD QRL+F  +QLED 
Sbjct: 64  LRLRGGTMQIFVKTLTGKTITLDVDSGDTIETVKAKIQDKEGIPPDQQRLIFAGKQLEDG 123

Query: 266 RNLASYKIVNESIVNL 281
           R LA Y I  ES ++L
Sbjct: 124 RTLADYNIQKESTLHL 139



 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 60/170 (35%), Positives = 89/170 (52%), Gaps = 9/170 (5%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---- 56
           + V   + IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 8   LDVDSGDTIETVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 65

Query: 57  NDSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYI 116
              G M+++ KT +  KT  L  +  DTIE +K  I+ +EGIP  +  + + GK +E   
Sbjct: 66  LRGGTMQIFVKTLTG-KTITLDVDSGDTIETVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 124

Query: 117 TLDVLNINNEDTLQMI-SVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVK 164
           TL   NI  E TL ++  +     +IFV+T T  T+ L+V    T+  VK
Sbjct: 125 TLADYNIQKESTLHLVLRLRGGTMQIFVKTLTGKTITLDVDSGDTIETVK 174



 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 29/62 (46%), Positives = 38/62 (61%)

Query: 220 LNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIV 279
           L G+ I L+V   DT+  VK K+  + G  PD QRL+F  +QLED R LA Y I  ES +
Sbjct: 1   LTGKTITLDVDSGDTIETVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL 60

Query: 280 NL 281
           +L
Sbjct: 61  HL 62


>gi|27734341|gb|AAM51199.1| polyubiquitin [Lotharella amoeboformis]
          Length = 175

 Score = 86.3 bits (212), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 60/172 (34%), Positives = 94/172 (54%), Gaps = 6/172 (3%)

Query: 73  KTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMI 132
           KT  L  + SDTI  +K  I+ +EGIP  +  + + GK +E   TL   NI  E TL ++
Sbjct: 4   KTITLDVDSSDTINTVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 63

Query: 133 -SVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQN 190
             +     +IFV+T T  T+ L+V  + T+  VK+ ++  +  IP +   L   G+QL++
Sbjct: 64  LRLRGGAMQIFVKTLTGKTITLDVDSSDTINTVKQKIQD-KEGIPPDQQRLIFAGKQLED 122

Query: 191 LKTLAYYDIKENEVLQII---RHVKHSIFVKLLNGRYIILEVAKFDTVRDVK 239
            +TLA Y+I++   L ++   R     IFVK L G+ I L+V   DT+  VK
Sbjct: 123 GRTLADYNIQKESTLHLVLRLRGGSMQIFVKTLTGKTITLDVDSSDTINTVK 174



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 52/136 (38%), Positives = 79/136 (58%), Gaps = 4/136 (2%)

Query: 149 TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQII 208
           T+ L+V  + T+  VK+ ++  +  IP +   L   G+QL++ +TLA Y+I++   L ++
Sbjct: 5   TITLDVDSSDTINTVKQKIQD-KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 63

Query: 209 ---RHVKHSIFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDD 265
              R     IFVK L G+ I L+V   DT+  VK K+  + G  PD QRL+F  +QLED 
Sbjct: 64  LRLRGGAMQIFVKTLTGKTITLDVDSSDTINTVKQKIQDKEGIPPDQQRLIFAGKQLEDG 123

Query: 266 RNLASYKIVNESIVNL 281
           R LA Y I  ES ++L
Sbjct: 124 RTLADYNIQKESTLHL 139



 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/171 (34%), Positives = 91/171 (53%), Gaps = 9/171 (5%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---- 56
           + V  ++ I  +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 8   LDVDSSDTINTVKQKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 65

Query: 57  NDSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYI 116
              G M+++ KT +  KT  L  + SDTI  +K  I+ +EGIP  +  + + GK +E   
Sbjct: 66  LRGGAMQIFVKTLTG-KTITLDVDSSDTINTVKQKIQDKEGIPPDQQRLIFAGKQLEDGR 124

Query: 117 TLDVLNINNEDTLQMI-SVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKK 165
           TL   NI  E TL ++  +     +IFV+T T  T+ L+V  + T+  VK+
Sbjct: 125 TLADYNIQKESTLHLVLRLRGGSMQIFVKTLTGKTITLDVDSSDTINTVKQ 175



 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 29/62 (46%), Positives = 38/62 (61%)

Query: 220 LNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIV 279
           L G+ I L+V   DT+  VK K+  + G  PD QRL+F  +QLED R LA Y I  ES +
Sbjct: 1   LTGKTITLDVDSSDTINTVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL 60

Query: 280 NL 281
           +L
Sbjct: 61  HL 62


>gi|301094179|ref|XP_002997933.1| ubiquitin, putative [Phytophthora infestans T30-4]
 gi|262109719|gb|EEY67771.1| ubiquitin, putative [Phytophthora infestans T30-4]
          Length = 175

 Score = 86.3 bits (212), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 52/145 (35%), Positives = 88/145 (60%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ L+V  + ++ +VK  ++  +  IP +   L   G+QL++ +TL+ Y+
Sbjct: 2   QIFVKTLTGKTITLDVEPSDSIDNVKSKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    IFVK L G+ I L+V   D++ +VK K+  + G  PD QRL+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDSIDNVKQKIQDKEGIPPDQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F  +QLED R L+ Y I  ES ++L
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHL 145



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 56/171 (32%), Positives = 99/171 (57%), Gaps = 5/171 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L    SD+I+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLDVEPSDSIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ L+V  + ++ +VK+ ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDSIDNVKQKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEV 229
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I L+V
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDV 169



 Score = 79.0 bits (193), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 56/158 (35%), Positives = 88/158 (55%), Gaps = 7/158 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LDVEPSDSIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L    SD+I+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLDVEPSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEV 154
           L   NI  E TL ++   +   +IFV+T T  T+ L+V
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDV 169


>gi|145498050|ref|XP_001435013.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124402142|emb|CAK67616.1| unnamed protein product [Paramecium tetraurelia]
          Length = 153

 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 54/145 (37%), Positives = 86/145 (59%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ L+V  + T+  VK  ++  +  IP +   L   G+QL++ +TL+ Y+
Sbjct: 2   QIFVKTLTGKTITLDVEPSDTIDAVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    IFVK L G+ I L+V   DT+  VK K+  + G  PD QRL+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKNITLDVEPSDTIDAVKAKIQDKEGIPPDQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F  +QLED R L+ Y I  ES ++L
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHL 145



 Score = 71.2 bits (173), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 47/135 (34%), Positives = 73/135 (54%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LDVEPSDTIDAVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  K   L    SDTI+ +K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KNITLDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMI 132
           L   NI  E TL ++
Sbjct: 132 LSDYNIQKESTLHLV 146



 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 47/152 (30%), Positives = 84/152 (55%), Gaps = 3/152 (1%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L    SDTI+ +K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T   + L+V  + T+  VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKNITLDVEPSDTIDAVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150


>gi|357116845|ref|XP_003560187.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin-60S ribosomal protein
           L40-like [Brachypodium distachyon]
          Length = 213

 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 57/145 (39%), Positives = 85/145 (58%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  +  + +VK  ++  +  IP E   L   G+QL N +TLA  +
Sbjct: 2   QIFVKTLTGKTITLEVESSDIIDNVKTKIQD-KEGIPPEQQRLIFAGKQLDNGRTLADCN 60

Query: 199 IKENEVLQIIRHV--KHSIFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  +  +  IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+
Sbjct: 61  IQKESTLHLVLRLQGRMXIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F  +QL+D R LA Y I  ES ++L
Sbjct: 121 FAGKQLDDGRTLADYNIQKESTLHL 145



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 49/148 (33%), Positives = 84/148 (56%), Gaps = 3/148 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SD I+N+K  I+ +EGIP  +  + + GK +++  TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDIIDNVKTKIQDKEGIPPEQQRLIFAGKQLDNGRTLADC 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +    IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLQGRMXIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQII 208
           L   G+QL + +TLA Y+I++   L ++
Sbjct: 119 LIFAGKQLDDGRTLADYNIQKESTLHLV 146



 Score = 70.5 bits (171), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 46/135 (34%), Positives = 75/135 (55%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  +   L +AG+QL+NG T+ D  I   S +H    
Sbjct: 15  LEVESSDIIDNVKTKIQDK--EGIPPEQQRLIFAGKQLDNGRTLADCNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M ++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK ++   T
Sbjct: 73  LQGRMXIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLDDGRT 131

Query: 118 LDVLNINNEDTLQMI 132
           L   NI  E TL ++
Sbjct: 132 LADYNIQKESTLHLV 146


>gi|340709503|ref|XP_003393346.1| PREDICTED: polyubiquitin-B-like isoform 1 [Bombus terrestris]
 gi|340709505|ref|XP_003393347.1| PREDICTED: polyubiquitin-B-like isoform 2 [Bombus terrestris]
          Length = 157

 Score = 85.9 bits (211), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 54/145 (37%), Positives = 86/145 (59%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TL+ Y+
Sbjct: 2   QIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++     ++  ++    I VK L G+ I LEV   DT+ +VK K+  + G  PD QRL+
Sbjct: 61  IQKESTSHLVLRLRGGMQISVKTLTGKAITLEVDVPDTIENVKAKIHEKEGIPPDQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F  +QLED R L+ Y I  ES ++L
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHL 145



 Score = 72.0 bits (175), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 49/135 (36%), Positives = 73/135 (54%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S  H    
Sbjct: 15  LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTSHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M++  KT +  K   L+ +  DTIEN+K  I  +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQISVKTLTG-KAITLEVDVPDTIENVKAKIHEKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMI 132
           L   NI  E TL ++
Sbjct: 132 LSDYNIQKESTLHLV 146



 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 48/148 (32%), Positives = 81/148 (54%), Gaps = 3/148 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E T  ++   +   +I V+T T   + LEV    T+ +VK  +   +  IP +   
Sbjct: 60  NIQKESTSHLVLRLRGGMQISVKTLTGKAITLEVDVPDTIENVKAKIHE-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQII 208
           L   G+QL++ +TL+ Y+I++   L ++
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLV 146


>gi|1805696|emb|CAA71664.1| polyubiquitin [Ceratitis capitata]
          Length = 134

 Score = 85.9 bits (211), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 50/131 (38%), Positives = 78/131 (59%), Gaps = 3/131 (2%)

Query: 149 TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQII 208
           T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TL+ Y+I++   L ++
Sbjct: 5   TITLEVEPSDTIENVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 63

Query: 209 RHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDR 266
             ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+F  +QLED R
Sbjct: 64  LRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 123

Query: 267 NLASYKIVNES 277
            L+ Y I  ES
Sbjct: 124 TLSDYNIQKES 134



 Score = 74.3 bits (181), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 49/129 (37%), Positives = 73/129 (56%), Gaps = 6/129 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 8   LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 65

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 66  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 124

Query: 118 LDVLNINNE 126
           L   NI  E
Sbjct: 125 LSDYNIQKE 133



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 47/130 (36%), Positives = 76/130 (58%), Gaps = 2/130 (1%)

Query: 73  KTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMI 132
           KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   NI  E TL ++
Sbjct: 4   KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 63

Query: 133 SVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNL 191
              +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ 
Sbjct: 64  LRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQRLIFAGKQLEDG 122

Query: 192 KTLAYYDIKE 201
           +TL+ Y+I++
Sbjct: 123 RTLSDYNIQK 132



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 29/62 (46%), Positives = 39/62 (62%)

Query: 220 LNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIV 279
           L G+ I LEV   DT+ +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES +
Sbjct: 1   LTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 60

Query: 280 NL 281
           +L
Sbjct: 61  HL 62


>gi|27734387|gb|AAM51222.1| polyubiquitin [Euglypha rotunda]
          Length = 177

 Score = 85.9 bits (211), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 58/174 (33%), Positives = 97/174 (55%), Gaps = 8/174 (4%)

Query: 73  KTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMI 132
           KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   N+  E TL ++
Sbjct: 4   KTITLDVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNVTKEATLHLV 63

Query: 133 SVPK--ELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQ 189
              +     +IFV+T T  T+ L+V  + T+ +VK+ ++  +  IP +   L   G+QL+
Sbjct: 64  LRLRGGSGMQIFVKTLTGKTITLDVEASDTIENVKQKIQD-KEGIPPDQQRLIFAGKQLE 122

Query: 190 NLKTLAYYDIKENEVLQIIRHVKHS----IFVKLLNGRYIILEVAKFDTVRDVK 239
           + +TL+ Y++ +   L ++  ++      IFVK L G+ I L+V   DT+ +VK
Sbjct: 123 DGRTLSDYNVTKEATLHLVLRLRGGSGMQIFVKTLTGKTITLDVEASDTIENVK 176



 Score = 83.2 bits (204), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 46/137 (33%), Positives = 81/137 (59%), Gaps = 5/137 (3%)

Query: 149 TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQII 208
           T+ L+V  + T+ +VK+ ++  +  IP +   L   G+QL++ +TL+ Y++ +   L ++
Sbjct: 5   TITLDVESSDTIENVKQKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYNVTKEATLHLV 63

Query: 209 RHVKHS----IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLED 264
             ++      IFVK L G+ I L+V   DT+ +VK K+  + G  PD QRL+F  +QLED
Sbjct: 64  LRLRGGSGMQIFVKTLTGKTITLDVEASDTIENVKQKIQDKEGIPPDQQRLIFAGKQLED 123

Query: 265 DRNLASYKIVNESIVNL 281
            R L+ Y +  E+ ++L
Sbjct: 124 GRTLSDYNVTKEATLHL 140



 Score = 80.9 bits (198), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 60/174 (34%), Positives = 96/174 (55%), Gaps = 13/174 (7%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---- 56
           + V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY +   + +H    
Sbjct: 8   LDVESSDTIENVKQKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNVTKEATLHLVLR 65

Query: 57  --NDSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIES 114
               SG M+++ KT +  KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E 
Sbjct: 66  LRGGSG-MQIFVKTLTG-KTITLDVEASDTIENVKQKIQDKEGIPPDQQRLIFAGKQLED 123

Query: 115 YITLDVLNINNEDTLQMISVPK--ELQEIFVQTPTS-TVKLEVRRAHTVLDVKK 165
             TL   N+  E TL ++   +     +IFV+T T  T+ L+V  + T+ +VK+
Sbjct: 124 GRTLSDYNVTKEATLHLVLRLRGGSGMQIFVKTLTGKTITLDVEASDTIENVKQ 177



 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 26/62 (41%), Positives = 39/62 (62%)

Query: 220 LNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIV 279
           L G+ I L+V   DT+ +VK K+  + G  PD QRL+F  +QLED R L+ Y +  E+ +
Sbjct: 1   LTGKTITLDVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNVTKEATL 60

Query: 280 NL 281
           +L
Sbjct: 61  HL 62


>gi|297735960|emb|CBI23934.3| unnamed protein product [Vitis vinifera]
          Length = 204

 Score = 85.9 bits (211), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 58/167 (34%), Positives = 88/167 (52%), Gaps = 25/167 (14%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESM----------------------RICIPS 176
           +IFV+T T  T+ LEV  + T+ +VK  ++                        +  IP 
Sbjct: 2   QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQSSDTIDNVKAKIQDKEGIPP 61

Query: 177 EDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDT 234
           +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT
Sbjct: 62  DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 121

Query: 235 VRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 122 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 168



 Score = 81.3 bits (199), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 56/154 (36%), Positives = 86/154 (55%), Gaps = 7/154 (4%)

Query: 4   KKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---NDSG 60
           + ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H      G
Sbjct: 41  QSSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRG 98

Query: 61  VMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDV 120
            M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL  
Sbjct: 99  GMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD 157

Query: 121 LNINNEDTLQMISVPKELQEIFVQTPTS-TVKLE 153
            NI  E TL ++   +   +IFV+T T  T+ LE
Sbjct: 158 YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 191



 Score = 78.6 bits (192), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 60/193 (31%), Positives = 98/193 (50%), Gaps = 28/193 (14%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYD----------------- 104
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +                   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQSSDTIDNVKAKIQDKEGI 59

Query: 105 ------IYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRA 157
                 + + GK +E   TL   NI  E TL ++   +   +IFV+T T  T+ LEV  +
Sbjct: 60  PPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESS 119

Query: 158 HTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--I 215
            T+ +VK  ++  +  IP +   L   G+QL++ +TLA Y+I++   L ++  ++    I
Sbjct: 120 DTIDNVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQI 178

Query: 216 FVKLLNGRYIILE 228
           FVK L G+ I LE
Sbjct: 179 FVKTLTGKTITLE 191


>gi|27734383|gb|AAM51220.1| polyubiquitin [Euglypha rotunda]
 gi|27734385|gb|AAM51221.1| polyubiquitin [Euglypha rotunda]
          Length = 177

 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 58/174 (33%), Positives = 97/174 (55%), Gaps = 8/174 (4%)

Query: 73  KTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMI 132
           KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   N+  E TL ++
Sbjct: 4   KTITLDVEASDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNVTKEATLHLV 63

Query: 133 SVPK--ELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQ 189
              +     +IFV+T T  T+ L+V  + T+ +VK+ ++  +  IP +   L   G+QL+
Sbjct: 64  LRLRGGSGMQIFVKTLTGKTITLDVEASDTIENVKQKIQD-KEGIPPDQQRLIFAGKQLE 122

Query: 190 NLKTLAYYDIKENEVLQIIRHVKHS----IFVKLLNGRYIILEVAKFDTVRDVK 239
           + +TL+ Y++ +   L ++  ++      IFVK L G+ I L+V   DT+ +VK
Sbjct: 123 DGRTLSDYNVTKEATLHLVLRLRGGSGMQIFVKTLTGKTITLDVEASDTIENVK 176



 Score = 83.2 bits (204), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 46/137 (33%), Positives = 81/137 (59%), Gaps = 5/137 (3%)

Query: 149 TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQII 208
           T+ L+V  + T+ +VK+ ++  +  IP +   L   G+QL++ +TL+ Y++ +   L ++
Sbjct: 5   TITLDVEASDTIENVKQKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYNVTKEATLHLV 63

Query: 209 RHVKHS----IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLED 264
             ++      IFVK L G+ I L+V   DT+ +VK K+  + G  PD QRL+F  +QLED
Sbjct: 64  LRLRGGSGMQIFVKTLTGKTITLDVEASDTIENVKQKIQDKEGIPPDQQRLIFAGKQLED 123

Query: 265 DRNLASYKIVNESIVNL 281
            R L+ Y +  E+ ++L
Sbjct: 124 GRTLSDYNVTKEATLHL 140



 Score = 80.5 bits (197), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 60/174 (34%), Positives = 96/174 (55%), Gaps = 13/174 (7%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---- 56
           + V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY +   + +H    
Sbjct: 8   LDVEASDTIENVKQKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNVTKEATLHLVLR 65

Query: 57  --NDSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIES 114
               SG M+++ KT +  KT  L    SDTIEN+K  I+ +EGIP  +  + + GK +E 
Sbjct: 66  LRGGSG-MQIFVKTLTG-KTITLDVEASDTIENVKQKIQDKEGIPPDQQRLIFAGKQLED 123

Query: 115 YITLDVLNINNEDTLQMISVPK--ELQEIFVQTPTS-TVKLEVRRAHTVLDVKK 165
             TL   N+  E TL ++   +     +IFV+T T  T+ L+V  + T+ +VK+
Sbjct: 124 GRTLSDYNVTKEATLHLVLRLRGGSGMQIFVKTLTGKTITLDVEASDTIENVKQ 177



 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 26/62 (41%), Positives = 39/62 (62%)

Query: 220 LNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIV 279
           L G+ I L+V   DT+ +VK K+  + G  PD QRL+F  +QLED R L+ Y +  E+ +
Sbjct: 1   LTGKTITLDVEASDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNVTKEATL 60

Query: 280 NL 281
           +L
Sbjct: 61  HL 62


>gi|27734306|gb|AAM50044.1| polyubiquitin 7 [Cercomonas sp. ATCC 50316]
          Length = 177

 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 51/137 (37%), Positives = 79/137 (57%), Gaps = 5/137 (3%)

Query: 149 TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQII 208
           T+ L+V  + T+  VK+ +   +  IP +   L   G+QL++ +TLA Y+I++   L ++
Sbjct: 5   TITLDVESSDTIETVKQKIRD-KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 63

Query: 209 RHVKHS----IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLED 264
             ++      IFVK L G+ I L+V   DT+  VK K+  + G  PD QRL+F  +QLED
Sbjct: 64  LRLRGGSAMQIFVKTLTGKTITLDVESSDTIETVKQKIQDKEGIPPDQQRLIFAGKQLED 123

Query: 265 DRNLASYKIVNESIVNL 281
            R LA Y I  ES ++L
Sbjct: 124 GRTLADYNIQKESTLHL 140



 Score = 85.1 bits (209), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 60/174 (34%), Positives = 94/174 (54%), Gaps = 8/174 (4%)

Query: 73  KTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMI 132
           KT  L    SDTIE +K  I  +EGIP  +  + + GK +E   TL   NI  E TL ++
Sbjct: 4   KTITLDVESSDTIETVKQKIRDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 63

Query: 133 SVPK--ELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQ 189
              +     +IFV+T T  T+ L+V  + T+  VK+ ++  +  IP +   L   G+QL+
Sbjct: 64  LRLRGGSAMQIFVKTLTGKTITLDVESSDTIETVKQKIQD-KEGIPPDQQRLIFAGKQLE 122

Query: 190 NLKTLAYYDIKENEVLQIIRHVKHS----IFVKLLNGRYIILEVAKFDTVRDVK 239
           + +TLA Y+I++   L ++  ++      IFVK L G+ I L+V   DT+  VK
Sbjct: 123 DGRTLADYNIQKESTLHLVLRLRGGSGMQIFVKTLTGKTITLDVESSDTIETVK 176



 Score = 80.9 bits (198), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 60/173 (34%), Positives = 92/173 (53%), Gaps = 11/173 (6%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---- 56
           + V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 8   LDVESSDTIETVKQKIRDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 65

Query: 57  -NDSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESY 115
                 M+++ KT +  KT  L    SDTIE +K  I+ +EGIP  +  + + GK +E  
Sbjct: 66  LRGGSAMQIFVKTLTG-KTITLDVESSDTIETVKQKIQDKEGIPPDQQRLIFAGKQLEDG 124

Query: 116 ITLDVLNINNEDTLQMISVPK--ELQEIFVQTPTS-TVKLEVRRAHTVLDVKK 165
            TL   NI  E TL ++   +     +IFV+T T  T+ L+V  + T+  VK+
Sbjct: 125 RTLADYNIQKESTLHLVLRLRGGSGMQIFVKTLTGKTITLDVESSDTIETVKQ 177



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/62 (46%), Positives = 38/62 (61%)

Query: 220 LNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIV 279
           L G+ I L+V   DT+  VK K+  + G  PD QRL+F  +QLED R LA Y I  ES +
Sbjct: 1   LTGKTITLDVESSDTIETVKQKIRDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL 60

Query: 280 NL 281
           +L
Sbjct: 61  HL 62


>gi|403284842|ref|XP_003933761.1| PREDICTED: ubiquitin-60S ribosomal protein L40-like isoform 1
           [Saimiri boliviensis boliviensis]
          Length = 153

 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 55/145 (37%), Positives = 87/145 (60%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IF++T TS T+ LEV  + T+ +VK  ++  +  IP +   L    +QL++ + L+ Y+
Sbjct: 2   QIFLKTLTSKTITLEVEPSDTIKNVKAKIQD-KEGIPPDQQRLIFARKQLEDGRNLSDYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L +I  ++    IFVK L  + I LEV   DT+ +VK K+  + G  PD QRL+
Sbjct: 61  IQKESTLHLILRLRGGMQIFVKTLTSKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F  +QLED R L+ Y I  ESI++L
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESILHL 145



 Score = 75.1 bits (183), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 50/155 (32%), Positives = 90/155 (58%), Gaps = 3/155 (1%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT ++ KT  L+   SDTI+N+K  I+ +EGIP  +  + +  K +E    L   
Sbjct: 1   MQIFLKTLTS-KTITLEVEPSDTIKNVKAKIQDKEGIPPDQQRLIFARKQLEDGRNLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL +I   +   +IFV+T TS T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLILRLRGGMQIFVKTLTSKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSI 215
           L   G+QL++ +TL+ Y+I++  +L ++  ++  +
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESILHLVLRLRGDV 153



 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 47/135 (34%), Positives = 75/135 (55%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +A +QLE+G  + DY I   S +H    
Sbjct: 15  LEVEPSDTIKNVKAKIQDK--EGIPPDQQRLIFARKQLEDGRNLSDYNIQKESTLHLILR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT ++ KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTS-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMI 132
           L   NI  E  L ++
Sbjct: 132 LSDYNIQKESILHLV 146


>gi|323716602|gb|ADY05179.1| ubiquitin [Acipenser persicus]
          Length = 132

 Score = 85.5 bits (210), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 50/132 (37%), Positives = 79/132 (59%), Gaps = 3/132 (2%)

Query: 152 LEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHV 211
           LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TL+ Y+I++   L ++  +
Sbjct: 2   LEVEPSDTIENVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 60

Query: 212 KHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLA 269
           +    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+F  +QLED R L+
Sbjct: 61  RGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLS 120

Query: 270 SYKIVNESIVNL 281
            Y I  ES ++L
Sbjct: 121 DYNIQKESTMHL 132



 Score = 77.8 bits (190), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 50/134 (37%), Positives = 76/134 (56%), Gaps = 6/134 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 2   LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 59

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 60  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 118

Query: 118 LDVLNINNEDTLQM 131
           L   NI  E T+ +
Sbjct: 119 LSDYNIQKESTMHL 132



 Score = 70.9 bits (172), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 45/132 (34%), Positives = 76/132 (57%), Gaps = 2/132 (1%)

Query: 77  LKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMISVPK 136
           L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   NI  E TL ++   +
Sbjct: 2   LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 61

Query: 137 ELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLA 195
              +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TL+
Sbjct: 62  GGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLS 120

Query: 196 YYDIKENEVLQI 207
            Y+I++   + +
Sbjct: 121 DYNIQKESTMHL 132


>gi|62079638|gb|AAX61165.1| ubiquitin [Oreochromis mossambicus]
          Length = 160

 Score = 84.7 bits (208), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 52/137 (37%), Positives = 82/137 (59%), Gaps = 4/137 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TL+ Y+
Sbjct: 2   QIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  +    PD QRL+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEAFPPDQQRLI 120

Query: 257 FKRQQLEDDRNLASYKI 273
           F  +QLED R L+ Y I
Sbjct: 121 FAGKQLEDGRTLSDYNI 137



 Score = 74.3 bits (181), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 90/163 (55%), Gaps = 6/163 (3%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +   P +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEAFPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKEN--EVLQIIRHVKHSIFVKLLN 221
           L   G+QL++ +TL+ Y+I+++    L  +      IFVK L 
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKSPPSTLSCVSG-GMQIFVKTLT 160



 Score = 72.0 bits (175), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 53/150 (35%), Positives = 80/150 (53%), Gaps = 7/150 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +E  P  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEAFPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPT 147
           L   NI       +  V   +Q IFV+T T
Sbjct: 132 LSDYNIQKSPPSTLSCVSGGMQ-IFVKTLT 160



 Score = 63.9 bits (154), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 33/67 (49%), Positives = 43/67 (64%)

Query: 215 IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIV 274
           IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+F  +QLED R L+ Y I 
Sbjct: 3   IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 62

Query: 275 NESIVNL 281
            ES ++L
Sbjct: 63  KESTLHL 69


>gi|403284846|ref|XP_003933763.1| PREDICTED: ubiquitin-60S ribosomal protein L40-like isoform 3
           [Saimiri boliviensis boliviensis]
          Length = 153

 Score = 84.7 bits (208), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 55/144 (38%), Positives = 86/144 (59%), Gaps = 4/144 (2%)

Query: 141 IFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDI 199
           IF++T TS T+ LEV  + T+ +VK  ++  +  IP +   L    +QL++ + L+ Y+I
Sbjct: 3   IFLKTLTSKTITLEVEPSDTIKNVKAKIQD-KEGIPPDQQRLIFARKQLEDGRNLSDYNI 61

Query: 200 KENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVF 257
           ++   L +I  ++    IFVK L  + I LEV   DT+ +VK K+  + G  PD QRL+F
Sbjct: 62  QKESTLHLILRLRGGMQIFVKTLTSKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIF 121

Query: 258 KRQQLEDDRNLASYKIVNESIVNL 281
             +QLED R L+ Y I  ESI++L
Sbjct: 122 AGKQLEDGRTLSDYNIQKESILHL 145



 Score = 73.6 bits (179), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 50/155 (32%), Positives = 89/155 (57%), Gaps = 3/155 (1%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M ++ KT ++ KT  L+   SDTI+N+K  I+ +EGIP  +  + +  K +E    L   
Sbjct: 1   MLIFLKTLTS-KTITLEVEPSDTIKNVKAKIQDKEGIPPDQQRLIFARKQLEDGRNLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL +I   +   +IFV+T TS T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLILRLRGGMQIFVKTLTSKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSI 215
           L   G+QL++ +TL+ Y+I++  +L ++  ++  +
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESILHLVLRLRGDV 153



 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 47/135 (34%), Positives = 75/135 (55%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +A +QLE+G  + DY I   S +H    
Sbjct: 15  LEVEPSDTIKNVKAKIQDK--EGIPPDQQRLIFARKQLEDGRNLSDYNIQKESTLHLILR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT ++ KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTS-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMI 132
           L   NI  E  L ++
Sbjct: 132 LSDYNIQKESILHLV 146


>gi|40647164|gb|AAR88388.1| polyubiquitin 3, partial [Plasmodiophora brassicae]
          Length = 175

 Score = 84.7 bits (208), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 59/172 (34%), Positives = 91/172 (52%), Gaps = 6/172 (3%)

Query: 73  KTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMI 132
           KT  L  +  DTIE +K  I+ +EGIP  +  + + GK +E   TL   NI  E TL ++
Sbjct: 4   KTITLDVDSGDTIETVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 63

Query: 133 -SVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQN 190
             +     +IFV+T T  T+ L+V     +  VK  ++  +  IP +   L   G+QL++
Sbjct: 64  LRLRGGTMQIFVKTLTGKTITLDVDSGDAIETVKAKIQD-KEGIPPDQQRLIFAGKQLED 122

Query: 191 LKTLAYYDIKENEVLQII---RHVKHSIFVKLLNGRYIILEVAKFDTVRDVK 239
            +TLA Y+I++   L ++   R     IFVK L G+ I L+V   DT+  VK
Sbjct: 123 GRTLADYNIQKESTLHLVLRLRGGTMQIFVKTLTGKTITLDVDSGDTIETVK 174



 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 51/136 (37%), Positives = 76/136 (55%), Gaps = 4/136 (2%)

Query: 149 TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQII 208
           T+ L+V    T+  VK  ++  +  IP +   L   G+QL++ +TLA Y+I++   L ++
Sbjct: 5   TITLDVDSGDTIETVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 63

Query: 209 ---RHVKHSIFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDD 265
              R     IFVK L G+ I L+V   D +  VK K+  + G  PD QRL+F  +QLED 
Sbjct: 64  LRLRGGTMQIFVKTLTGKTITLDVDSGDAIETVKAKIQDKEGIPPDQQRLIFAGKQLEDG 123

Query: 266 RNLASYKIVNESIVNL 281
           R LA Y I  ES ++L
Sbjct: 124 RTLADYNIQKESTLHL 139



 Score = 80.9 bits (198), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 59/170 (34%), Positives = 88/170 (51%), Gaps = 9/170 (5%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---- 56
           + V   + IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 8   LDVDSGDTIETVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 65

Query: 57  NDSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYI 116
              G M+++ KT +  KT  L  +  D IE +K  I+ +EGIP  +  + + GK +E   
Sbjct: 66  LRGGTMQIFVKTLTG-KTITLDVDSGDAIETVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 124

Query: 117 TLDVLNINNEDTLQMI-SVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVK 164
           TL   NI  E TL ++  +     +IFV+T T  T+ L+V    T+  VK
Sbjct: 125 TLADYNIQKESTLHLVLRLRGGTMQIFVKTLTGKTITLDVDSGDTIETVK 174



 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 29/62 (46%), Positives = 38/62 (61%)

Query: 220 LNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIV 279
           L G+ I L+V   DT+  VK K+  + G  PD QRL+F  +QLED R LA Y I  ES +
Sbjct: 1   LTGKTITLDVDSGDTIETVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL 60

Query: 280 NL 281
           +L
Sbjct: 61  HL 62


>gi|290971454|ref|XP_002668516.1| polyubiquitin [Naegleria gruberi]
 gi|290992572|ref|XP_002678908.1| polyubiquitin [Naegleria gruberi]
 gi|284081958|gb|EFC35772.1| polyubiquitin [Naegleria gruberi]
 gi|284092522|gb|EFC46164.1| polyubiquitin [Naegleria gruberi]
          Length = 152

 Score = 84.3 bits (207), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 49/145 (33%), Positives = 89/145 (61%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           ++FV+T T  T+ LEV    ++ +VK+ V+  +  IP E   L   G+QL++ +T+  Y+
Sbjct: 2   QLFVKTLTGKTITLEVESNDSIENVKRKVQD-KEGIPPEQQRLIYAGKQLEDGRTINDYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I+++  L ++  ++    +FVK L G+ I +E+   DT++++K K+F + G   D QRL+
Sbjct: 61  IQKDSTLHLVLRLRGGMQLFVKTLTGKTITIEMESNDTIQNMKQKIFDKEGIPSDQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           +  +QLED R L+ Y +  +S V+L
Sbjct: 121 YAGKQLEDGRQLSDYNLQKDSTVHL 145



 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 42/148 (28%), Positives = 87/148 (58%), Gaps = 3/148 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+L+ KT +  KT  L+   +D+IEN+K  ++ +EGIP  +  + Y GK +E   T++  
Sbjct: 1   MQLFVKTLTG-KTITLEVESNDSIENVKRKVQDKEGIPPEQQRLIYAGKQLEDGRTINDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  + TL ++   +   ++FV+T T  T+ +E+    T+ ++K+ +   +  IPS+   
Sbjct: 60  NIQKDSTLHLVLRLRGGMQLFVKTLTGKTITIEMESNDTIQNMKQKIFD-KEGIPSDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQII 208
           L   G+QL++ + L+ Y+++++  + ++
Sbjct: 119 LIYAGKQLEDGRQLSDYNLQKDSTVHLV 146



 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 45/135 (33%), Positives = 75/135 (55%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+  + IE +K ++  K  E I  +   L YAG+QLE+G T+ DY I  +S +H    
Sbjct: 15  LEVESNDSIENVKRKVQDK--EGIPPEQQRLIYAGKQLEDGRTINDYNIQKDSTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+L+ KT +  KT  ++   +DTI+N+K  I  +EGIP  +  + Y GK +E    
Sbjct: 73  LRGGMQLFVKTLTG-KTITIEMESNDTIQNMKQKIFDKEGIPSDQQRLIYAGKQLEDGRQ 131

Query: 118 LDVLNINNEDTLQMI 132
           L   N+  + T+ ++
Sbjct: 132 LSDYNLQKDSTVHLV 146


>gi|27734377|gb|AAM51217.1| polyubiquitin [Cercomonas sp. ATCC 50316]
          Length = 177

 Score = 84.3 bits (207), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 50/137 (36%), Positives = 79/137 (57%), Gaps = 5/137 (3%)

Query: 149 TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQII 208
           T+ L+V  +  +  VK+ ++  +  IP +   L   G+QL++ +TLA Y+I++   L ++
Sbjct: 5   TITLDVESSDMIETVKQKIQD-KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 63

Query: 209 RHVKHS----IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLED 264
             ++      IFVK L G+ I L+V   DT+  VK K+  + G  PD QRL+F  +QLED
Sbjct: 64  LRLRGGSGMQIFVKTLTGKTITLDVESSDTIETVKQKIQDKEGIPPDQQRLIFAGKQLED 123

Query: 265 DRNLASYKIVNESIVNL 281
            R LA Y I  ES ++L
Sbjct: 124 GRTLADYNIQKESTLHL 140



 Score = 82.8 bits (203), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 59/174 (33%), Positives = 94/174 (54%), Gaps = 8/174 (4%)

Query: 73  KTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMI 132
           KT  L    SD IE +K  I+ +EGIP  +  + + GK +E   TL   NI  E TL ++
Sbjct: 4   KTITLDVESSDMIETVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 63

Query: 133 SVPK--ELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQ 189
              +     +IFV+T T  T+ L+V  + T+  VK+ ++  +  IP +   L   G+QL+
Sbjct: 64  LRLRGGSGMQIFVKTLTGKTITLDVESSDTIETVKQKIQD-KEGIPPDQQRLIFAGKQLE 122

Query: 190 NLKTLAYYDIKENEVLQIIRHVKHS----IFVKLLNGRYIILEVAKFDTVRDVK 239
           + +TLA Y+I++   L ++  ++      IFVK L G+ I L+V   DT+  VK
Sbjct: 123 DGRTLADYNIQKESTLHLVLRLRGGSGMQIFVKTLTGKTITLDVESSDTIETVK 176



 Score = 80.1 bits (196), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 62/174 (35%), Positives = 94/174 (54%), Gaps = 13/174 (7%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---- 56
           + V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 8   LDVESSDMIETVKQKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 65

Query: 57  --NDSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIES 114
               SG M+++ KT +  KT  L    SDTIE +K  I+ +EGIP  +  + + GK +E 
Sbjct: 66  LRGGSG-MQIFVKTLTG-KTITLDVESSDTIETVKQKIQDKEGIPPDQQRLIFAGKQLED 123

Query: 115 YITLDVLNINNEDTLQMISVPK--ELQEIFVQTPTS-TVKLEVRRAHTVLDVKK 165
             TL   NI  E TL ++   +     +IFV+T T  T+ L+V  + T+  VK+
Sbjct: 124 GRTLADYNIQKESTLHLVLRLRGGSGMQIFVKTLTGKTITLDVESSDTIETVKQ 177



 Score = 53.9 bits (128), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 28/62 (45%), Positives = 37/62 (59%)

Query: 220 LNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIV 279
           L G+ I L+V   D +  VK K+  + G  PD QRL+F  +QLED R LA Y I  ES +
Sbjct: 1   LTGKTITLDVESSDMIETVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL 60

Query: 280 NL 281
           +L
Sbjct: 61  HL 62


>gi|17016983|gb|AAL33551.1|AF436850_1 polyubiquitin [Cucumis melo]
          Length = 143

 Score = 83.6 bits (205), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 54/142 (38%), Positives = 81/142 (57%), Gaps = 5/142 (3%)

Query: 27  DLPELFYAGQQLENGLTVIDYGIPNNSVIH---NDSGVMKLYFKTPSNEKTFELKANRSD 83
           D   L +AG+QLE+G T+ DY I   S +H      G M+++ KT +  KT  L+   SD
Sbjct: 2   DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG-KTITLEVESSD 60

Query: 84  TIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEIFV 143
           TI+N+K  I+ +EGIP  +  + + GK +E   TL   NI  E TL ++   +   +IFV
Sbjct: 61  TIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFV 120

Query: 144 QTPTS-TVKLEVRRAHTVLDVK 164
           +T T  T+ LEV  + T+ +VK
Sbjct: 121 KTLTGKTITLEVESSDTIDNVK 142



 Score = 78.2 bits (191), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 44/103 (42%), Positives = 64/103 (62%), Gaps = 2/103 (1%)

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 6   LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 65

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 66  KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 108



 Score = 70.9 bits (172), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 48/138 (34%), Positives = 78/138 (56%), Gaps = 4/138 (2%)

Query: 105 IYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDV 163
           + + GK +E   TL   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +V
Sbjct: 6   LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 65

Query: 164 KKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLN 221
           K  ++  +  IP +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L 
Sbjct: 66  KAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLT 124

Query: 222 GRYIILEVAKFDTVRDVK 239
           G+ I LEV   DT+ +VK
Sbjct: 125 GKTITLEVESSDTIDNVK 142



 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/92 (36%), Positives = 54/92 (58%), Gaps = 6/92 (6%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 54  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 111

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIK 89
             G M+++ KT +  KT  L+   SDTI+N+K
Sbjct: 112 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVK 142



 Score = 40.8 bits (94), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 18/32 (56%), Positives = 22/32 (68%)

Query: 250 PDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 1   PDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 32


>gi|323453810|gb|EGB09681.1| polyubiquitin, partial [Aureococcus anophagefferens]
          Length = 134

 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 48/131 (36%), Positives = 79/131 (60%), Gaps = 3/131 (2%)

Query: 149 TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQII 208
           T+ L+V  + T+ +VK+ ++  +  IP +   L   G+QL++ +TL+ Y+I++   L ++
Sbjct: 5   TITLDVEPSDTIDNVKQKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 63

Query: 209 RHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDR 266
             ++    IFVK L G+ I L+V   DT+ +VK K+  + G  PD QRL+F  +QLED R
Sbjct: 64  LRLRGGMQIFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGR 123

Query: 267 NLASYKIVNES 277
            L+ Y I  ES
Sbjct: 124 TLSDYNIQKES 134



 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 47/129 (36%), Positives = 71/129 (55%), Gaps = 6/129 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 8   LDVEPSDTIDNVKQKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 65

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L    SDTI+N+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 66  LRGGMQIFVKTLTG-KTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT 124

Query: 118 LDVLNINNE 126
           L   NI  E
Sbjct: 125 LSDYNIQKE 133



 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 45/130 (34%), Positives = 76/130 (58%), Gaps = 2/130 (1%)

Query: 73  KTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMI 132
           KT  L    SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   NI  E TL ++
Sbjct: 4   KTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 63

Query: 133 SVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNL 191
              +   +IFV+T T  T+ L+V  + T+ +VK+ ++  +  IP +   L   G+QL++ 
Sbjct: 64  LRLRGGMQIFVKTLTGKTITLDVEPSDTIDNVKQKIQD-KEGIPPDQQRLIFAGKQLEDG 122

Query: 192 KTLAYYDIKE 201
           +TL+ Y+I++
Sbjct: 123 RTLSDYNIQK 132



 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 28/62 (45%), Positives = 39/62 (62%)

Query: 220 LNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIV 279
           L G+ I L+V   DT+ +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES +
Sbjct: 1   LTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 60

Query: 280 NL 281
           +L
Sbjct: 61  HL 62


>gi|242034699|ref|XP_002464744.1| hypothetical protein SORBIDRAFT_01g026250 [Sorghum bicolor]
 gi|241918598|gb|EER91742.1| hypothetical protein SORBIDRAFT_01g026250 [Sorghum bicolor]
          Length = 353

 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 113/230 (49%), Gaps = 28/230 (12%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ K  +  + + ++   SDT++++K  +E  E +P     +  GG  +E    L   
Sbjct: 1   MQIFLKGFAG-RHYTIEVQSSDTVDSLKAKVEELEAVPAKLQRLLVGGYQLEDGHKLSKY 59

Query: 122 NINNEDTLQMI-------SVPKELQE-IFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRI 172
            I    T+ ++         P      I+VQT TS T+ L+V+ + TV DV+K +   + 
Sbjct: 60  KIVEFATVHLVLRLLSCRQCPSSTDRYIYVQTRTSNTIALQVQPSDTVTDVRKNISGHQ- 118

Query: 173 CIPSEDCELFRGGEQLQNLKTLAYY-DIKENEVLQIIRHVKHSIFVKLLNGRYIILEVAK 231
                   LF  G +LQ+ +T  YY  I+ +  L +   ++  IFVK  NG+   LEV  
Sbjct: 119 -------SLFLAGNRLQDDRTFGYYYQIQNDATLHLDFGMQ--IFVKTFNGKTSTLEVDP 169

Query: 232 FDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
            DTV DVK K+        D Q+++F   +L+D R L S K+ N S ++L
Sbjct: 170 SDTVGDVKAKML-------DQQKIIFDGSRLDDQRKLGSCKVQNHSTLHL 212



 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 68/259 (26%), Positives = 123/259 (47%), Gaps = 33/259 (12%)

Query: 30  ELFYAGQQLENGLTV-IDYGIPNNSVIHNDSGVMKLYFKTPSNEKTFELKANRSDTIENI 88
            LF AG +L++  T    Y I N++ +H D G M+++ KT  N KT  L+ + SDT+ ++
Sbjct: 119 SLFLAGNRLQDDRTFGYYYQIQNDATLHLDFG-MQIFVKT-FNGKTSTLEVDPSDTVGDV 176

Query: 89  KFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMISVPKELQ--EIFVQT- 145
           K  +       + +  I + G  ++    L    + N  TL +   P++    +I V+T 
Sbjct: 177 KAKM-------LDQQKIIFDGSRLDDQRKLGSCKVQNHSTLHLDLCPRDGNGMQIAVKTL 229

Query: 146 --PTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKEN 202
             P S  ++ +V+   T+ D+K  ++  +         L   G+QL + +TLA YD++  
Sbjct: 230 PLPGSEAIRFKVQITDTIGDLKAKIQDQQ--------RLLFNGQQLVDEQTLADYDVQRL 281

Query: 203 EVLQIIRHVKHSIFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQL 262
             L +       +F+K+  G+ I LEV   +TV DV  K+   +        L F   +L
Sbjct: 282 STLHL--DCPMQVFMKMSTGQTITLEVEPSNTVDDVMKKIGHHMS-------LTFDGNEL 332

Query: 263 EDDRNLASYKIVNESIVNL 281
           ++ + LA   +   S ++L
Sbjct: 333 DNGKTLAECNVHMGSTLHL 351



 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 85/301 (28%), Positives = 133/301 (44%), Gaps = 49/301 (16%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLP----ELFYAGQQLENGLTVIDYGIPNNSVIH 56
           ++V+ ++ ++ LK    AKVEE  LE +P     L   G QLE+G  +  Y I   + +H
Sbjct: 15  IEVQSSDTVDSLK----AKVEE--LEAVPAKLQRLLVGGYQLEDGHKLSKYKIVEFATVH 68

Query: 57  ----------NDSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIY 106
                       S   +  +       T  L+   SDT+       +VR+ I  H+    
Sbjct: 69  LVLRLLSCRQCPSSTDRYIYVQTRTSNTIALQVQPSDTV------TDVRKNISGHQSLFL 122

Query: 107 YGGKLIESYITLDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVK- 164
            G +L +         I N+ TL +        +IFV+T    T  LEV  + TV DVK 
Sbjct: 123 AGNRLQDDRTFGYYYQIQNDATLHL----DFGMQIFVKTFNGKTSTLEVDPSDTVGDVKA 178

Query: 165 KMVESMRICIPSEDCELFR--GGEQLQNLKTLAYYDI--KENEVLQIIRHVKHSIFVKLL 220
           KM++  +I       +  R  G  ++QN  TL + D+  ++   +QI   VK    + L 
Sbjct: 179 KMLDQQKIIFDGSRLDDQRKLGSCKVQNHSTL-HLDLCPRDGNGMQIA--VK---TLPLP 232

Query: 221 NGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVN 280
               I  +V   DT+ D+K K+        D QRL+F  QQL D++ LA Y +   S ++
Sbjct: 233 GSEAIRFKVQITDTIGDLKAKI-------QDQQRLLFNGQQLVDEQTLADYDVQRLSTLH 285

Query: 281 L 281
           L
Sbjct: 286 L 286


>gi|91081107|ref|XP_975512.1| PREDICTED: similar to ubiquitin C [Tribolium castaneum]
 gi|270005296|gb|EFA01744.1| hypothetical protein TcasGA2_TC007341 [Tribolium castaneum]
          Length = 149

 Score = 83.2 bits (204), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 53/141 (37%), Positives = 85/141 (60%), Gaps = 4/141 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV++ T   + L+V  A T+  VK+ +++ +  IP++  ++   G  L++  TL  Y+
Sbjct: 2   QIFVESQTGEIITLQVHPADTIESVKQQIQNEK-GIPADQQKMIHRGYPLEDSLTLVDYN 60

Query: 199 IKENEVLQIIRHVKHSIFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFK 258
           IKE   L +  +++  IFVK LNG  I LEV   +T+ ++K K+  + G  P+ QRL+F 
Sbjct: 61  IKEESTLYLKNYIQ--IFVKTLNGETITLEVDPSETIENLKAKIQDQQGVPPNLQRLIFA 118

Query: 259 RQQLEDDRNLASYKIVNESIV 279
            QQLED   L+ Y I +ESIV
Sbjct: 119 GQQLEDGFTLSDYNIQDESIV 139



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/163 (27%), Positives = 88/163 (53%), Gaps = 15/163 (9%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ ++ + E    L+ + +DTIE++K  I+  +GIP  +  + + G  +E  +TL   
Sbjct: 1   MQIFVESQTGE-IITLQVHPADTIESVKQQIQNEKGIPADQQKMIHRGYPLEDSLTLVDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL +    K   +IFV+T    T+ LEV  + T+ ++K  ++  +  +P     
Sbjct: 60  NIKEESTLYL----KNYIQIFVKTLNGETITLEVDPSETIENLKAKIQDQQ-GVPPNLQR 114

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSIFVKLLNGR 223
           L   G+QL++  TL+ Y+I++  +++ +        +KL NG+
Sbjct: 115 LIFAGQQLEDGFTLSDYNIQDESIVRFV--------LKLFNGK 149



 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 38/132 (28%), Positives = 75/132 (56%), Gaps = 4/132 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIHNDSG 60
           ++V   + IE +K +I    E+ I  D  ++ + G  LE+ LT++DY I   S ++  + 
Sbjct: 15  LQVHPADTIESVKQQIQN--EKGIPADQQKMIHRGYPLEDSLTLVDYNIKEESTLYLKN- 71

Query: 61  VMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDV 120
            ++++ KT + E T  L+ + S+TIEN+K  I+ ++G+P +   + + G+ +E   TL  
Sbjct: 72  YIQIFVKTLNGE-TITLEVDPSETIENLKAKIQDQQGVPPNLQRLIFAGQQLEDGFTLSD 130

Query: 121 LNINNEDTLQMI 132
            NI +E  ++ +
Sbjct: 131 YNIQDESIVRFV 142



 Score = 40.8 bits (94), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 24/67 (35%), Positives = 34/67 (50%)

Query: 215 IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIV 274
           IFV+   G  I L+V   DT+  VK ++  E G   D Q+++ +   LED   L  Y I 
Sbjct: 3   IFVESQTGEIITLQVHPADTIESVKQQIQNEKGIPADQQKMIHRGYPLEDSLTLVDYNIK 62

Query: 275 NESIVNL 281
            ES + L
Sbjct: 63  EESTLYL 69


>gi|397527146|ref|XP_003833462.1| PREDICTED: LOW QUALITY PROTEIN: polyubiquitin-like [Pan paniscus]
          Length = 153

 Score = 83.2 bits (204), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 53/145 (36%), Positives = 86/145 (59%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTSTV-KLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  +  LEV  + T+ +VK  ++  +   P +  +L   G+QL++  +L+ Y+
Sbjct: 2   QIFVKTLTGKIITLEVEPSATIENVKAKIQD-KEGNPHDQQKLIFAGKQLEDGCSLSDYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  E G  PD QRL+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDEEGIPPDQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F  ++LED R L+ Y I  ES ++L
Sbjct: 121 FAGKKLEDGRTLSDYSIQKESTLHL 145



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 48/135 (35%), Positives = 75/135 (55%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ +  IE +K +I  K  E    D  +L +AG+QLE+G ++ DY I   S +H    
Sbjct: 15  LEVEPSATIENVKAKIQDK--EGNPHDQQKLIFAGKQLEDGCSLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+  EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDEEGIPPDQQRLIFAGKKLEDGRT 131

Query: 118 LDVLNINNEDTLQMI 132
           L   +I  E TL ++
Sbjct: 132 LSDYSIQKESTLHLV 146



 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 81/148 (54%), Gaps = 3/148 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  K   L+   S TIEN+K  I+ +EG P  +  + + GK +E   +L   
Sbjct: 1   MQIFVKTLTG-KIITLEVEPSATIENVKAKIQDKEGNPHDQQKLIFAGKQLEDGCSLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++     IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDEE-GIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQII 208
           L   G++L++ +TL+ Y I++   L ++
Sbjct: 119 LIFAGKKLEDGRTLSDYSIQKESTLHLV 146


>gi|353230196|emb|CCD76367.1| putative ubiquitin (ribosomal protein L40) [Schistosoma mansoni]
          Length = 247

 Score = 83.2 bits (204), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 52/137 (37%), Positives = 82/137 (59%), Gaps = 4/137 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TL+ Y+
Sbjct: 2   QIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 FKRQQLEDDRNLASYKI 273
           F  +QLED R L+   I
Sbjct: 121 FAGKQLEDGRTLSDLHI 137



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 48/127 (37%), Positives = 73/127 (57%), Gaps = 6/127 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 118 LDVLNIN 124
           L  L+I 
Sbjct: 132 LSDLHIQ 138



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 50/141 (35%), Positives = 81/141 (57%), Gaps = 3/141 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKE 201
           L   G+QL++ +TL+   I+E
Sbjct: 119 LIFAGKQLEDGRTLSDLHIQE 139



 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/67 (49%), Positives = 43/67 (64%)

Query: 215 IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIV 274
           IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+F  +QLED R L+ Y I 
Sbjct: 3   IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 62

Query: 275 NESIVNL 281
            ES ++L
Sbjct: 63  KESTLHL 69


>gi|339233028|ref|XP_003381631.1| ubiquitin family protein [Trichinella spiralis]
 gi|316979531|gb|EFV62315.1| ubiquitin family protein [Trichinella spiralis]
          Length = 203

 Score = 82.8 bits (203), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 56/166 (33%), Positives = 87/166 (52%), Gaps = 25/166 (15%)

Query: 141 IFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRG--------------- 184
           IFV+T T  T+ LEV  + T+ +VK  ++      P +   +F G               
Sbjct: 26  IFVKTLTGKTITLEVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGNKEITILDKEGIPPD 85

Query: 185 -------GEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTV 235
                  G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+
Sbjct: 86  QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTI 145

Query: 236 RDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
            +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 146 ENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 191



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 45/115 (39%), Positives = 65/115 (56%), Gaps = 4/115 (3%)

Query: 21  EEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---NDSGVMKLYFKTPSNEKTFEL 77
           +E I  D   L +AG+QLE+G T+ DY I   S +H      G M+++ KT +  KT  L
Sbjct: 79  KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG-KTITL 137

Query: 78  KANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMI 132
           +   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   NI  E TL ++
Sbjct: 138 EVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 192



 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 48/164 (29%), Positives = 81/164 (49%), Gaps = 25/164 (15%)

Query: 73  KTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGG----------------------- 109
           KT  L+   SDTIEN+K  I+ +EGIP  +  + + G                       
Sbjct: 34  KTITLEVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGNKEITILDKEGIPPDQQRLIFAG 93

Query: 110 KLIESYITLDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVE 168
           K +E   TL   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++
Sbjct: 94  KQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKSKIQ 153

Query: 169 SMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
             +  IP +   L   G+QL++ +TL+ Y+I++   L ++  ++
Sbjct: 154 D-KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 196


>gi|123390682|ref|XP_001299927.1| polyubiquitin [Trichomonas vaginalis G3]
 gi|121880876|gb|EAX86997.1| polyubiquitin [Trichomonas vaginalis G3]
          Length = 153

 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 53/145 (36%), Positives = 81/145 (55%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTST-VKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T   + LEV     + DVK  ++  +  IP +   L   G+QL++  TL  Y 
Sbjct: 2   QIFVKTLTGKHITLEVEPTDRIEDVKAKIQD-KEGIPPDQQRLIFAGKQLEDGNTLQDYS 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I+++  L ++  ++    IFVK L G++I LEV   D + DVK K+  + G  PD QRL+
Sbjct: 61  IQKDSTLHLVLRLRGGMQIFVKTLTGKHITLEVEPTDRIEDVKAKIQDKEGIPPDQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F  +QLED   L  Y I  +S ++L
Sbjct: 121 FAGKQLEDGNTLQDYSIQKDSTLHL 145



 Score = 70.5 bits (171), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 46/135 (34%), Positives = 77/135 (57%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ T++IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I  +S +H    
Sbjct: 15  LEVEPTDRIEDVKAKIQDK--EGIPPDQQRLIFAGKQLEDGNTLQDYSIQKDSTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  K   L+   +D IE++K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KHITLEVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGKQLEDGNT 131

Query: 118 LDVLNINNEDTLQMI 132
           L   +I  + TL ++
Sbjct: 132 LQDYSIQKDSTLHLV 146



 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/155 (28%), Positives = 82/155 (52%), Gaps = 3/155 (1%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  K   L+   +D IE++K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KHITLEVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGKQLEDGNTLQDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTST-VKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           +I  + TL ++   +   +IFV+T T   + LEV     + DVK  ++  +  IP +   
Sbjct: 60  SIQKDSTLHLVLRLRGGMQIFVKTLTGKHITLEVEPTDRIEDVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSI 215
           L   G+QL++  TL  Y I+++  L ++  ++  +
Sbjct: 119 LIFAGKQLEDGNTLQDYSIQKDSTLHLVLRLRGGL 153


>gi|242039395|ref|XP_002467092.1| hypothetical protein SORBIDRAFT_01g019440 [Sorghum bicolor]
 gi|241920946|gb|EER94090.1| hypothetical protein SORBIDRAFT_01g019440 [Sorghum bicolor]
          Length = 249

 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 65/213 (30%), Positives = 108/213 (50%), Gaps = 10/213 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVI--HND 58
           + VK T+ I+++K +I A   E I      LF+AG QLE    + DY I  NS +  +  
Sbjct: 23  LDVKSTDTIDQIKSQISAL--EGIDSSQQALFFAGNQLEKDNRLADYNIMANSCVDLYVT 80

Query: 59  SGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITL 118
            G M++    PS  KT +L   +S ++ ++K +IE + GIP+ E  + YG + +E    L
Sbjct: 81  DG-MQISVSIPSVGKTIKLNLKKSQSVADVKAVIEQKGGIPLDEQILMYGCQKLEDNKLL 139

Query: 119 DVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSE 177
               ++N  TL ++  P +   I V      T+ ++V+  +TV DVK M+E++   +P+ 
Sbjct: 140 SQCGLSNGHTLHVLVCPTDKLRISVDVDGERTINVDVKSWYTVADVKLMIETLE-GLPAS 198

Query: 178 DCELFR---GGEQLQNLKTLAYYDIKENEVLQI 207
              L R   GG   Q  KTL +  I  +  + +
Sbjct: 199 TQILMRTQPGGANTQYSKTLKHCRINTSRTMTL 231



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 53/202 (26%), Positives = 95/202 (47%), Gaps = 11/202 (5%)

Query: 63  KLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLN 122
           K+Y K     KT  L    +DTI+ IK  I   EGI   +  +++ G  +E    L   N
Sbjct: 12  KIYVKM---MKTVPLDVKSTDTIDQIKSQISALEGIDSSQQALFFAGNQLEKDNRLADYN 68

Query: 123 INNEDTLQMISVPKELQEIFVQTPT--STVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           I     + +     +  +I V  P+   T+KL ++++ +V DVK ++E  +  IP ++  
Sbjct: 69  IMANSCVDLYVT--DGMQISVSIPSVGKTIKLNLKKSQSVADVKAVIEQ-KGGIPLDEQI 125

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHV--KHSIFVKLLNGRYIILEVAKFDTVRDV 238
           L  G ++L++ K L+   +     L ++     K  I V +   R I ++V  + TV DV
Sbjct: 126 LMYGCQKLEDNKLLSQCGLSNGHTLHVLVCPTDKLRISVDVDGERTINVDVKSWYTVADV 185

Query: 239 KDKLFREIGQAPDSQRLVFKRQ 260
           K  +   +   P S +++ + Q
Sbjct: 186 K-LMIETLEGLPASTQILMRTQ 206



 Score = 45.8 bits (107), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 64/128 (50%), Gaps = 2/128 (1%)

Query: 149 TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQII 208
           TV L+V+   T+  +K  + ++   I S    LF  G QL+    LA Y+I  N  + + 
Sbjct: 20  TVPLDVKSTDTIDQIKSQISALE-GIDSSQQALFFAGNQLEKDNRLADYNIMANSCVDLY 78

Query: 209 RHVKHSIFVKLLN-GRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRN 267
                 I V + + G+ I L + K  +V DVK  + ++ G   D Q L++  Q+LED++ 
Sbjct: 79  VTDGMQISVSIPSVGKTIKLNLKKSQSVADVKAVIEQKGGIPLDEQILMYGCQKLEDNKL 138

Query: 268 LASYKIVN 275
           L+   + N
Sbjct: 139 LSQCGLSN 146



 Score = 38.1 bits (87), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 2/69 (2%)

Query: 213 HSIFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYK 272
           + I+VK++  + + L+V   DT+  +K ++    G     Q L F   QLE D  LA Y 
Sbjct: 11  YKIYVKMM--KTVPLDVKSTDTIDQIKSQISALEGIDSSQQALFFAGNQLEKDNRLADYN 68

Query: 273 IVNESIVNL 281
           I+  S V+L
Sbjct: 69  IMANSCVDL 77


>gi|157503117|gb|ABV58641.1| ubiquitin [Catharanthus roseus]
          Length = 137

 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 46/110 (41%), Positives = 67/110 (60%), Gaps = 2/110 (1%)

Query: 174 IPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAK 231
           IP +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV  
Sbjct: 13  IPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVES 72

Query: 232 FDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
            DT+ +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 73  SDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIXKESTLHL 122



 Score = 77.4 bits (189), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 50/135 (37%), Positives = 76/135 (56%), Gaps = 6/135 (4%)

Query: 16  IHAKVE--EEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---NDSGVMKLYFKTPS 70
           + AK++  E I  D   L +AG+QLE+G T+ DY I   S +H      G M+++ KT +
Sbjct: 3   VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLT 62

Query: 71  NEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQ 130
             KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   NI  E TL 
Sbjct: 63  G-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIXKESTLH 121

Query: 131 MISVPKELQEIFVQT 145
           ++   +   +IFV+T
Sbjct: 122 LVLRLRGGMQIFVKT 136



 Score = 67.4 bits (163), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 45/138 (32%), Positives = 77/138 (55%), Gaps = 4/138 (2%)

Query: 86  ENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEIFVQT 145
           +N+K  I+ +EGIP  +  + + GK +E   TL   NI  E TL ++   +   +IFV+T
Sbjct: 1   DNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKT 60

Query: 146 PTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEV 204
            T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TLA Y+I +   
Sbjct: 61  LTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLADYNIXKEST 119

Query: 205 LQIIRHVKHS--IFVKLL 220
           L ++  ++    IFVK +
Sbjct: 120 LHLVLRLRGGMQIFVKTM 137



 Score = 42.7 bits (99), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 22/45 (48%), Positives = 29/45 (64%)

Query: 237 DVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 2   NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 46


>gi|123471218|ref|XP_001318810.1| polyubiquitin [Trichomonas vaginalis G3]
 gi|123479158|ref|XP_001322738.1| polyubiquitin [Trichomonas vaginalis G3]
 gi|123501326|ref|XP_001328048.1| polyubiquitin [Trichomonas vaginalis G3]
 gi|121901578|gb|EAY06587.1| polyubiquitin, putative [Trichomonas vaginalis G3]
 gi|121905590|gb|EAY10515.1| polyubiquitin, putative [Trichomonas vaginalis G3]
 gi|121910986|gb|EAY15825.1| polyubiquitin, putative [Trichomonas vaginalis G3]
          Length = 153

 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 53/145 (36%), Positives = 81/145 (55%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTST-VKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T   + LEV     + DVK  ++  +  IP +   L   G+QL++  TL  Y 
Sbjct: 2   QIFVKTLTGKHITLEVEPTDRIEDVKAKIQD-KEGIPPDQQRLIFAGKQLEDGNTLQDYS 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I+++  L ++  ++    IFVK L G++I LEV   D + DVK K+  + G  PD QRL+
Sbjct: 61  IQKDSTLHLVLRLRGGMQIFVKTLTGKHITLEVEPTDRIEDVKAKIQDKEGIPPDQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F  +QLED   L  Y I  +S ++L
Sbjct: 121 FAGKQLEDGNTLQDYSIQKDSTLHL 145



 Score = 70.5 bits (171), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 46/135 (34%), Positives = 77/135 (57%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ T++IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I  +S +H    
Sbjct: 15  LEVEPTDRIEDVKAKIQDK--EGIPPDQQRLIFAGKQLEDGNTLQDYSIQKDSTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  K   L+   +D IE++K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KHITLEVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGKQLEDGNT 131

Query: 118 LDVLNINNEDTLQMI 132
           L   +I  + TL ++
Sbjct: 132 LQDYSIQKDSTLHLV 146



 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 79/148 (53%), Gaps = 3/148 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  K   L+   +D IE++K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KHITLEVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGKQLEDGNTLQDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTST-VKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           +I  + TL ++   +   +IFV+T T   + LEV     + DVK  ++  +  IP +   
Sbjct: 60  SIQKDSTLHLVLRLRGGMQIFVKTLTGKHITLEVEPTDRIEDVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQII 208
           L   G+QL++  TL  Y I+++  L ++
Sbjct: 119 LIFAGKQLEDGNTLQDYSIQKDSTLHLV 146


>gi|33327286|gb|AAQ08999.1| polyubiquitin 2 [Phaseolus vulgaris]
          Length = 134

 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 49/127 (38%), Positives = 76/127 (59%), Gaps = 3/127 (2%)

Query: 157 AHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS-- 214
           + T+ +VK  ++  +  IP +   L   G+QL++ +TLA Y+I++   L ++  ++    
Sbjct: 1   SDTIDNVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQ 59

Query: 215 IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIV 274
           IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+F  +QLED R LA Y I 
Sbjct: 60  IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 119

Query: 275 NESIVNL 281
            ES ++L
Sbjct: 120 KESTLHL 126



 Score = 75.5 bits (184), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 48/130 (36%), Positives = 73/130 (56%), Gaps = 6/130 (4%)

Query: 6   TEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---NDSGVM 62
           ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H      G M
Sbjct: 1   SDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGM 58

Query: 63  KLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLN 122
           +++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   N
Sbjct: 59  QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 117

Query: 123 INNEDTLQMI 132
           I  E TL ++
Sbjct: 118 IQKESTLHLV 127



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 45/128 (35%), Positives = 75/128 (58%), Gaps = 2/128 (1%)

Query: 82  SDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEI 141
           SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   NI  E TL ++   +   +I
Sbjct: 1   SDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQI 60

Query: 142 FVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIK 200
           FV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TLA Y+I+
Sbjct: 61  FVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 119

Query: 201 ENEVLQII 208
           +   L ++
Sbjct: 120 KESTLHLV 127


>gi|290997001|ref|XP_002681070.1| polyubiquitin [Naegleria gruberi]
 gi|284094693|gb|EFC48326.1| polyubiquitin [Naegleria gruberi]
          Length = 153

 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 49/145 (33%), Positives = 87/145 (60%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           ++FV+T T  T+ LEV    ++ +VK+ V+  +  IP E   L   G+QL++ +T+  Y+
Sbjct: 2   QLFVKTLTGKTITLEVESNDSIENVKRKVQD-KEGIPPEQQRLIYAGKQLEDGRTINDYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I+++  L ++  ++    +FVK L G  I +E+   DTV ++K K+F + G   D QRL+
Sbjct: 61  IQKDSTLHLVLRLRGGMQLFVKTLTGNTITIEMESNDTVENMKQKIFDKEGIPSDQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           +  +QLED R ++ Y +  +S V+L
Sbjct: 121 YAGKQLEDGRTISDYNLQKDSTVHL 145



 Score = 70.5 bits (171), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 47/136 (34%), Positives = 77/136 (56%), Gaps = 8/136 (5%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+  + IE +K ++  K  E I  +   L YAG+QLE+G T+ DY I  +S +H    
Sbjct: 15  LEVESNDSIENVKRKVQDK--EGIPPEQQRLIYAGKQLEDGRTINDYNIQKDSTLHLVLR 72

Query: 58  DSGVMKLYFKT-PSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYI 116
             G M+L+ KT   N  T E+++N  DT+EN+K  I  +EGIP  +  + Y GK +E   
Sbjct: 73  LRGGMQLFVKTLTGNTITIEMESN--DTVENMKQKIFDKEGIPSDQQRLIYAGKQLEDGR 130

Query: 117 TLDVLNINNEDTLQMI 132
           T+   N+  + T+ ++
Sbjct: 131 TISDYNLQKDSTVHLV 146



 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 43/148 (29%), Positives = 88/148 (59%), Gaps = 3/148 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+L+ KT +  KT  L+   +D+IEN+K  ++ +EGIP  +  + Y GK +E   T++  
Sbjct: 1   MQLFVKTLTG-KTITLEVESNDSIENVKRKVQDKEGIPPEQQRLIYAGKQLEDGRTINDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  + TL ++   +   ++FV+T T  T+ +E+    TV ++K+ +   +  IPS+   
Sbjct: 60  NIQKDSTLHLVLRLRGGMQLFVKTLTGNTITIEMESNDTVENMKQKIFD-KEGIPSDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQII 208
           L   G+QL++ +T++ Y+++++  + ++
Sbjct: 119 LIYAGKQLEDGRTISDYNLQKDSTVHLV 146


>gi|10719701|gb|AAG22093.1| ubiquitin [Scyliorhinus torazame]
          Length = 173

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/145 (35%), Positives = 84/145 (57%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+  EV  + T+ +VK  ++  +  IP +   L   G+QL + +TL+ Y+
Sbjct: 26  QIFVKTLTGKTITXEVEPSDTIENVKAKIQ-XKEGIPPDQQRLIFAGKQLXDGRTLSDYN 84

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    IFVK L G+ I  EV   DT+ +VK K+  + G  PD QRL+
Sbjct: 85  IQKESTLHLVLRLRGGMQIFVKTLTGKTITXEVEPSDTIENVKAKIQXKEGIPPDQQRLI 144

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F  +QLE+ R L+ Y I   S ++L
Sbjct: 145 FAGKQLEEXRTLSDYNIQKXSTLHL 169



 Score = 78.2 bits (191), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 56/174 (32%), Positives = 91/174 (52%), Gaps = 7/174 (4%)

Query: 43  TVIDYGIPNNSVIH----NDSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGI 98
           T  DY I   S +H       G M+++ KT +  KT   +   SDTIEN+K  I+ +EGI
Sbjct: 2   TXSDYNIQKXSTLHLVLRGLRGGMQIFVKTLTG-KTITXEVEPSDTIENVKAKIQXKEGI 60

Query: 99  PVHEYDIYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRA 157
           P  +  + + GK +    TL   NI  E TL ++   +   +IFV+T T  T+  EV  +
Sbjct: 61  PPDQQRLIFAGKQLXDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITXEVEPS 120

Query: 158 HTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHV 211
            T+ +VK  ++  +  IP +   L   G+QL+  +TL+ Y+I++   L ++  V
Sbjct: 121 DTIENVKAKIQ-XKEGIPPDQQRLIFAGKQLEEXRTLSDYNIQKXSTLHLVLRV 173



 Score = 73.6 bits (179), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 48/133 (36%), Positives = 72/133 (54%), Gaps = 6/133 (4%)

Query: 3   VKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---NDS 59
           V+ ++ IE +K +I  K  E I  D   L +AG+QL +G T+ DY I   S +H      
Sbjct: 41  VEPSDTIENVKAKIQXK--EGIPPDQQRLIFAGKQLXDGRTLSDYNIQKESTLHLVLRLR 98

Query: 60  GVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLD 119
           G M+++ KT +  KT   +   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL 
Sbjct: 99  GGMQIFVKTLTG-KTITXEVEPSDTIENVKAKIQXKEGIPPDQQRLIFAGKQLEEXRTLS 157

Query: 120 VLNINNEDTLQMI 132
             NI    TL ++
Sbjct: 158 DYNIQKXSTLHLV 170



 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 36/92 (39%), Positives = 54/92 (58%), Gaps = 3/92 (3%)

Query: 193 TLAYYDIKENEVLQII-RHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQA 249
           T + Y+I++   L ++ R ++    IFVK L G+ I  EV   DT+ +VK K+  + G  
Sbjct: 2   TXSDYNIQKXSTLHLVLRGLRGGMQIFVKTLTGKTITXEVEPSDTIENVKAKIQXKEGIP 61

Query: 250 PDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           PD QRL+F  +QL D R L+ Y I  ES ++L
Sbjct: 62  PDQQRLIFAGKQLXDGRTLSDYNIQKESTLHL 93


>gi|154416813|ref|XP_001581428.1| polyubiquitin [Trichomonas vaginalis G3]
 gi|121915655|gb|EAY20442.1| polyubiquitin, putative [Trichomonas vaginalis G3]
          Length = 147

 Score = 82.0 bits (201), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 53/143 (37%), Positives = 80/143 (55%), Gaps = 4/143 (2%)

Query: 140 EIFVQTPTST-VKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T   + LEV     + DVK  ++  +  IP +   L   G+QL++  TL  Y 
Sbjct: 2   QIFVKTLTGKHITLEVEPTDRIEDVKAKIQD-KEGIPPDQQRLIFAGKQLEDGNTLQDYS 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I+++  L ++  ++    IFVK L G++I LEV   D + DVK K+  + G  PD QRL+
Sbjct: 61  IQKDSTLHLVLRLRGGMQIFVKTLTGKHITLEVEPTDRIEDVKAKIQDKEGIPPDQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIV 279
           F  +QLED   L  Y I  +SI+
Sbjct: 121 FAGKQLEDGNTLQDYSIQKDSIL 143



 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/133 (33%), Positives = 75/133 (56%), Gaps = 6/133 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ T++IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I  +S +H    
Sbjct: 15  LEVEPTDRIEDVKAKIQDK--EGIPPDQQRLIFAGKQLEDGNTLQDYSIQKDSTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  K   L+   +D IE++K  I+ +EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KHITLEVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGKQLEDGNT 131

Query: 118 LDVLNINNEDTLQ 130
           L   +I  +  L+
Sbjct: 132 LQDYSIQKDSILR 144



 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 44/146 (30%), Positives = 79/146 (54%), Gaps = 3/146 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  K   L+   +D IE++K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KHITLEVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGKQLEDGNTLQDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTST-VKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           +I  + TL ++   +   +IFV+T T   + LEV     + DVK  ++  +  IP +   
Sbjct: 60  SIQKDSTLHLVLRLRGGMQIFVKTLTGKHITLEVEPTDRIEDVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQ 206
           L   G+QL++  TL  Y I+++ +L+
Sbjct: 119 LIFAGKQLEDGNTLQDYSIQKDSILR 144



 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/67 (46%), Positives = 41/67 (61%)

Query: 215 IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIV 274
           IFVK L G++I LEV   D + DVK K+  + G  PD QRL+F  +QLED   L  Y I 
Sbjct: 3   IFVKTLTGKHITLEVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGKQLEDGNTLQDYSIQ 62

Query: 275 NESIVNL 281
            +S ++L
Sbjct: 63  KDSTLHL 69


>gi|145530712|ref|XP_001451128.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124418772|emb|CAK83731.1| unnamed protein product [Paramecium tetraurelia]
          Length = 169

 Score = 81.6 bits (200), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 56/171 (32%), Positives = 94/171 (54%), Gaps = 11/171 (6%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L    SDTI+ +K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ L+V  + T       +++ R  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDT-------IDATRKGIPPDQQR 112

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEV 229
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I L+V
Sbjct: 113 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDV 163



 Score = 78.2 bits (191), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 51/145 (35%), Positives = 82/145 (56%), Gaps = 10/145 (6%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ L+V  + T+  VK  ++  +  IP +   L   G+QL++ +TL+ Y+
Sbjct: 2   QIFVKTLTGKTITLDVEPSDTIDAVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    IFVK L G+ I L+V   DT+   +       G  PD QRL+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDATRK------GIPPDQQRLI 114

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F  +QLED R L+ Y I  ES ++L
Sbjct: 115 FAGKQLEDGRTLSDYNIQKESTLHL 139



 Score = 70.5 bits (171), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 54/158 (34%), Positives = 83/158 (52%), Gaps = 13/158 (8%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LDVEPSDTIDAVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L    SDTI+        R+GIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLDVEPSDTID------ATRKGIPPDQQRLIFAGKQLEDGRT 125

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEV 154
           L   NI  E TL ++   +   +IFV+T T  T+ L+V
Sbjct: 126 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDV 163


>gi|290997019|ref|XP_002681079.1| polyubiquitin [Naegleria gruberi]
 gi|284094702|gb|EFC48335.1| polyubiquitin [Naegleria gruberi]
          Length = 153

 Score = 81.6 bits (200), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 48/145 (33%), Positives = 87/145 (60%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           ++FV+T T  T+ LEV    ++ +VK  ++  +  IP E   L   G+QL++ +T+  Y+
Sbjct: 2   QLFVKTLTGKTITLEVESNDSIENVKSKIQD-KEGIPPEQQRLIYAGKQLEDGRTINDYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I+++  L ++  ++    +FVK L G+ I +E+   DTV ++K K+F + G   D QRL+
Sbjct: 61  IQKDSTLHLVLRLRGGMQLFVKTLTGKTITIEMESNDTVENMKQKIFDKEGIPSDQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           +  +QLED R ++ Y +  +S V+L
Sbjct: 121 YAGKQLEDGRTISDYNLQKDSTVHL 145



 Score = 70.5 bits (171), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 46/135 (34%), Positives = 76/135 (56%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+  + IE +K +I  K  E I  +   L YAG+QLE+G T+ DY I  +S +H    
Sbjct: 15  LEVESNDSIENVKSKIQDK--EGIPPEQQRLIYAGKQLEDGRTINDYNIQKDSTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+L+ KT +  KT  ++   +DT+EN+K  I  +EGIP  +  + Y GK +E   T
Sbjct: 73  LRGGMQLFVKTLTG-KTITIEMESNDTVENMKQKIFDKEGIPSDQQRLIYAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMI 132
           +   N+  + T+ ++
Sbjct: 132 ISDYNLQKDSTVHLV 146



 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 88/148 (59%), Gaps = 3/148 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+L+ KT +  KT  L+   +D+IEN+K  I+ +EGIP  +  + Y GK +E   T++  
Sbjct: 1   MQLFVKTLTG-KTITLEVESNDSIENVKSKIQDKEGIPPEQQRLIYAGKQLEDGRTINDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  + TL ++   +   ++FV+T T  T+ +E+    TV ++K+ +   +  IPS+   
Sbjct: 60  NIQKDSTLHLVLRLRGGMQLFVKTLTGKTITIEMESNDTVENMKQKIFD-KEGIPSDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQII 208
           L   G+QL++ +T++ Y+++++  + ++
Sbjct: 119 LIYAGKQLEDGRTISDYNLQKDSTVHLV 146


>gi|449533510|ref|XP_004173717.1| PREDICTED: polyubiquitin-like, partial [Cucumis sativus]
          Length = 126

 Score = 81.6 bits (200), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 46/110 (41%), Positives = 67/110 (60%), Gaps = 2/110 (1%)

Query: 174 IPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAK 231
           IP +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV  
Sbjct: 9   IPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVES 68

Query: 232 FDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
            DT+ +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 69  SDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 118



 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 44/120 (36%), Positives = 68/120 (56%), Gaps = 4/120 (3%)

Query: 16  IHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---NDSGVMKLYFKTPSNE 72
           + ++ +E I  D   L +AG+QLE+G T+ DY I   S +H      G M+++ KT +  
Sbjct: 1   LRSEDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG- 59

Query: 73  KTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMI 132
           KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   NI  E TL ++
Sbjct: 60  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 119



 Score = 60.8 bits (146), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 39/121 (32%), Positives = 68/121 (56%), Gaps = 2/121 (1%)

Query: 93  EVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVK 151
           E +EGIP  +  + + GK +E   TL   NI  E TL ++   +   +IFV+T T  T+ 
Sbjct: 4   EDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIT 63

Query: 152 LEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHV 211
           LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TLA Y+I++   L ++  +
Sbjct: 64  LEVESSDTIDNVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL 122

Query: 212 K 212
           +
Sbjct: 123 R 123



 Score = 41.2 bits (95), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 19/35 (54%), Positives = 23/35 (65%)

Query: 247 GQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 8   GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 42


>gi|290984552|ref|XP_002674991.1| polyubiquitin [Naegleria gruberi]
 gi|284088584|gb|EFC42247.1| polyubiquitin [Naegleria gruberi]
          Length = 153

 Score = 81.6 bits (200), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 47/145 (32%), Positives = 86/145 (59%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           ++FV+T T  T+ LEV    ++ +VK+ V+  +  +P E   L   G+QL++ +T   Y+
Sbjct: 2   QLFVKTLTGKTITLEVESNDSIENVKRKVQD-KEGVPPEQQRLIYAGKQLEDGRTFNDYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I+++  L ++  ++    +FVK L G+ I +E    DT+ ++K K+F + G   D QRL+
Sbjct: 61  IQKDSTLHLVLRLRGGMQLFVKTLTGKTITIETESNDTIENMKQKIFDKEGIPSDQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           +  +QLED R ++ Y +  +S V+L
Sbjct: 121 YAGKQLEDGRTISDYNLQKDSTVHL 145



 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 45/135 (33%), Positives = 75/135 (55%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+  + IE +K ++  K  E +  +   L YAG+QLE+G T  DY I  +S +H    
Sbjct: 15  LEVESNDSIENVKRKVQDK--EGVPPEQQRLIYAGKQLEDGRTFNDYNIQKDSTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+L+ KT +  KT  ++   +DTIEN+K  I  +EGIP  +  + Y GK +E   T
Sbjct: 73  LRGGMQLFVKTLTG-KTITIETESNDTIENMKQKIFDKEGIPSDQQRLIYAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMI 132
           +   N+  + T+ ++
Sbjct: 132 ISDYNLQKDSTVHLV 146



 Score = 67.8 bits (164), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 41/148 (27%), Positives = 86/148 (58%), Gaps = 3/148 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+L+ KT +  KT  L+   +D+IEN+K  ++ +EG+P  +  + Y GK +E   T +  
Sbjct: 1   MQLFVKTLTG-KTITLEVESNDSIENVKRKVQDKEGVPPEQQRLIYAGKQLEDGRTFNDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  + TL ++   +   ++FV+T T  T+ +E     T+ ++K+ +   +  IPS+   
Sbjct: 60  NIQKDSTLHLVLRLRGGMQLFVKTLTGKTITIETESNDTIENMKQKIFD-KEGIPSDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQII 208
           L   G+QL++ +T++ Y+++++  + ++
Sbjct: 119 LIYAGKQLEDGRTISDYNLQKDSTVHLV 146


>gi|84796035|gb|ABC66105.1| putative pentameric polyubiquitin [Zinnia violacea]
          Length = 122

 Score = 81.6 bits (200), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 46/110 (41%), Positives = 67/110 (60%), Gaps = 2/110 (1%)

Query: 174 IPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAK 231
           IP +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV  
Sbjct: 5   IPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVES 64

Query: 232 FDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
            DT+ +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 65  SDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 114



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 44/115 (38%), Positives = 65/115 (56%), Gaps = 4/115 (3%)

Query: 21  EEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---NDSGVMKLYFKTPSNEKTFEL 77
           +E I  D   L +AG+QLE+G T+ DY I   S +H      G M+++ KT +  KT  L
Sbjct: 2   KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG-KTITL 60

Query: 78  KANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMI 132
           +   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   NI  E TL ++
Sbjct: 61  EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 115



 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/121 (31%), Positives = 67/121 (55%), Gaps = 2/121 (1%)

Query: 95  REGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLE 153
           +EGIP  +  + + GK +E   TL   NI  E TL ++   +   +IFV+T T  T+ LE
Sbjct: 2   KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 61

Query: 154 VRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKH 213
           V  + T+ +VK  ++  +  IP +   L   G+QL++ +TLA Y+I++   L ++  ++ 
Sbjct: 62  VESSDTIDNVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRG 120

Query: 214 S 214
            
Sbjct: 121 G 121



 Score = 41.2 bits (95), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 19/35 (54%), Positives = 23/35 (65%)

Query: 247 GQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 4   GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 38


>gi|350426996|ref|XP_003494613.1| PREDICTED: polyubiquitin-A-like, partial [Bombus impatiens]
          Length = 136

 Score = 81.6 bits (200), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 53/135 (39%), Positives = 78/135 (57%), Gaps = 5/135 (3%)

Query: 34  AGQQLENGLTVIDYGIPNNSVIH---NDSGVMKLYFKTPSNEKTFELKANRSDTIENIKF 90
           AG+QLE+G T+ DY I   S +H      G M+++ KT +  KT  L+   SDTIEN+K 
Sbjct: 1   AGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG-KTITLEVEASDTIENVKA 59

Query: 91  IIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEIFVQTPTS-T 149
            I+ +EGIP  +  + + GK +E   TL   NI  E TL ++   +   +IFV+T T  T
Sbjct: 60  KIQDKEGIPPDQQRVIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 119

Query: 150 VKLEVRRAHTVLDVK 164
           + LEV  + T+ +VK
Sbjct: 120 ITLEVEASDTIENVK 134



 Score = 75.1 bits (183), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 40/99 (40%), Positives = 63/99 (63%), Gaps = 2/99 (2%)

Query: 185 GEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKL 242
           G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+
Sbjct: 2   GKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 61

Query: 243 FREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
             + G  PD QR++F  +QLED R L+ Y I  ES ++L
Sbjct: 62  QDKEGIPPDQQRVIFAGKQLEDGRTLSDYNIQKESTLHL 100



 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 47/136 (34%), Positives = 77/136 (56%), Gaps = 4/136 (2%)

Query: 109 GKLIESYITLDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMV 167
           GK +E   TL   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  +
Sbjct: 2   GKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 61

Query: 168 ESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYI 225
           +  +  IP +   +   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I
Sbjct: 62  QD-KEGIPPDQQRVIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTI 120

Query: 226 ILEVAKFDTVRDVKDK 241
            LEV   DT+ +VK K
Sbjct: 121 TLEVEASDTIENVKAK 136



 Score = 53.9 bits (128), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 54/92 (58%), Gaps = 6/92 (6%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   + +AG+QLE+G T+ DY I   S +H    
Sbjct: 46  LEVEASDTIENVKAKIQDK--EGIPPDQQRVIFAGKQLEDGRTLSDYNIQKESTLHLVLR 103

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIK 89
             G M+++ KT +  KT  L+   SDTIEN+K
Sbjct: 104 LRGGMQIFVKTLTG-KTITLEVEASDTIENVK 134


>gi|145495350|ref|XP_001433668.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124400787|emb|CAK66271.1| unnamed protein product [Paramecium tetraurelia]
          Length = 154

 Score = 81.6 bits (200), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 52/145 (35%), Positives = 84/145 (57%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ L+V+   T+  VK  ++  +  IP +   L   G+QL++ +TL  Y+
Sbjct: 3   QIFVKTLTGKTITLDVKSEDTIDAVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLQDYN 61

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    IFVK L+G+ I L+V    T+  +K K+  + G  PD QRL+
Sbjct: 62  IQKESTLHLVLRLRGGMQIFVKNLSGKTITLDVEPDQTIDMIKSKIQDKEGIPPDQQRLI 121

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F  +QLED R L  Y I  ES ++L
Sbjct: 122 FAGKQLEDGRTLGDYNIQKESTIHL 146



 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 47/135 (34%), Positives = 70/135 (51%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + VK  + I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 16  LDVKSEDTIDAVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLQDYNIQKESTLHLVLR 73

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ K  S  KT  L      TI+ IK  I+ +EGIP  +  + + GK +E   T
Sbjct: 74  LRGGMQIFVKNLSG-KTITLDVEPDQTIDMIKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 132

Query: 118 LDVLNINNEDTLQMI 132
           L   NI  E T+ ++
Sbjct: 133 LGDYNIQKESTIHLV 147



 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 42/155 (27%), Positives = 82/155 (52%), Gaps = 3/155 (1%)

Query: 61  VMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDV 120
           +++++ KT +  KT  L     DTI+ +K  I+ +EGIP  +  + + GK +E   TL  
Sbjct: 1   MIQIFVKTLTG-KTITLDVKSEDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLQD 59

Query: 121 LNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDC 179
            NI  E TL ++   +   +IFV+  +  T+ L+V    T+  +K  ++  +  IP +  
Sbjct: 60  YNIQKESTLHLVLRLRGGMQIFVKNLSGKTITLDVEPDQTIDMIKSKIQD-KEGIPPDQQ 118

Query: 180 ELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
            L   G+QL++ +TL  Y+I++   + ++  ++  
Sbjct: 119 RLIFAGKQLEDGRTLGDYNIQKESTIHLVLRLRGG 153


>gi|380016682|ref|XP_003692305.1| PREDICTED: uncharacterized protein LOC100871808 [Apis florea]
          Length = 377

 Score = 81.3 bits (199), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 52/139 (37%), Positives = 82/139 (58%), Gaps = 4/139 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TL+ Y+
Sbjct: 2   QIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVN 275
           F  +QLED R L    +V 
Sbjct: 121 FAGKQLEDGRVLGDCPLVQ 139



 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 44/116 (37%), Positives = 68/116 (58%), Gaps = 6/116 (5%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIE 113
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE 127



 Score = 67.4 bits (163), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 47/135 (34%), Positives = 76/135 (56%), Gaps = 3/135 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLA 195
           L   G+QL++ + L 
Sbjct: 119 LIFAGKQLEDGRVLG 133



 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/67 (49%), Positives = 43/67 (64%)

Query: 215 IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIV 274
           IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+F  +QLED R L+ Y I 
Sbjct: 3   IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 62

Query: 275 NESIVNL 281
            ES ++L
Sbjct: 63  KESTLHL 69


>gi|357146617|ref|XP_003574055.1| PREDICTED: polyubiquitin-like [Brachypodium distachyon]
          Length = 340

 Score = 81.3 bits (199), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 70/238 (29%), Positives = 121/238 (50%), Gaps = 18/238 (7%)

Query: 22  EEILEDLPELFYAGQQLENGLTVIDYGI-PNNSVIHNDSGVMKLYFK----TPSNEKTFE 76
           E I + + ELF+AG  L+N   V DY I PN+SV    +  M++        PS+ KT  
Sbjct: 49  EGIDKSMQELFFAGIHLKNHGKVADYNIMPNSSVELYVTDRMQISVDIPSDVPSDGKTIR 108

Query: 77  LKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMISVPK 136
           L   +S+ + ++K  IE +EGIP++   + Y G+ +E+   L    + N+  L ++  P 
Sbjct: 109 LNMKKSNKVVDVKAEIEQKEGIPINRQMLIYEGRHLENNHMLSQCGLTNDPALLLLVRPT 168

Query: 137 ELQEIFVQTPTST-VKLEVRRAHTVLDVKKMVESMRICIPSEDCELF--RGGEQ--LQNL 191
           +   +FV       V L V+  HTV  VK M++S+   +P+ +  L   R G    L++ 
Sbjct: 169 DNLHVFVNVGDKRFVSLTVKCWHTVAIVKSMIDSLE-GLPAWNQILMQPRSGVDVVLKDS 227

Query: 192 KTLAYYDIKENEVLQIIRHVKH-------SIFVKLLNGRYIILEVAKFDTVRDVKDKL 242
           KTL    +K N++L + + V+H        +F++L  G+ + + +   D V +V  K+
Sbjct: 228 KTLQAQGVKNNDILILQQKVQHMRNNQTVQVFIRLWEGKTVTMFLNLSDRVEEVMKKI 285



 Score = 42.7 bits (99), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 51/219 (23%), Positives = 102/219 (46%), Gaps = 15/219 (6%)

Query: 73  KTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMI 132
           KT  L  N +DT++ IK      EGI     ++++ G  ++++  +   NI    ++++ 
Sbjct: 26  KTVTLDVNCTDTVDQIKSKFSTIEGIDKSMQELFFAGIHLKNHGKVADYNIMPNSSVELY 85

Query: 133 SVPKELQEIFVQTPTS------TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGE 186
              +   +I V  P+       T++L +++++ V+DVK  +E  +  IP     L   G 
Sbjct: 86  VTDR--MQISVDIPSDVPSDGKTIRLNMKKSNKVVDVKAEIEQ-KEGIPINRQMLIYEGR 142

Query: 187 QLQNLKTLAYYDIKEN-EVLQIIRHVKH-SIFVKLLNGRYIILEVAKFDTVRDVKDKLFR 244
            L+N   L+   +  +  +L ++R   +  +FV + + R++ L V  + TV  VK  +  
Sbjct: 143 HLENNHMLSQCGLTNDPALLLLVRPTDNLHVFVNVGDKRFVSLTVKCWHTVAIVKSMIDS 202

Query: 245 EIGQAPDSQRLVFKRQQ----LEDDRNLASYKIVNESIV 279
             G    +Q L+  R      L+D + L +  + N  I+
Sbjct: 203 LEGLPAWNQILMQPRSGVDVVLKDSKTLQAQGVKNNDIL 241


>gi|339232958|ref|XP_003381596.1| ubiquitin family protein [Trichinella spiralis]
 gi|316979574|gb|EFV62350.1| ubiquitin family protein [Trichinella spiralis]
          Length = 152

 Score = 81.3 bits (199), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 48/127 (37%), Positives = 76/127 (59%), Gaps = 3/127 (2%)

Query: 157 AHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS-- 214
           + T+ +VK  ++  +  IP +   L   G+QL++ +TL+ Y+I++   L ++  ++    
Sbjct: 14  SDTIENVKGKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 72

Query: 215 IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIV 274
           IFVK L G+ I LEV   DTV +VK K+  + G  PD QRL+F  +QLED R L+ Y I 
Sbjct: 73  IFVKTLTGKTITLEVEPSDTVENVKGKIQDKEGIPPDQQRLIFAGKQLEDSRTLSDYNIQ 132

Query: 275 NESIVNL 281
            ES ++L
Sbjct: 133 KESTLHL 139



 Score = 75.9 bits (185), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 49/130 (37%), Positives = 73/130 (56%), Gaps = 6/130 (4%)

Query: 6   TEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---NDSGVM 62
           ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H      G M
Sbjct: 14  SDTIENVKGKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 71

Query: 63  KLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLN 122
           +++ KT +  KT  L+   SDT+EN+K  I+ +EGIP  +  + + GK +E   TL   N
Sbjct: 72  QIFVKTLTG-KTITLEVEPSDTVENVKGKIQDKEGIPPDQQRLIFAGKQLEDSRTLSDYN 130

Query: 123 INNEDTLQMI 132
           I  E TL ++
Sbjct: 131 IQKESTLHLV 140



 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 49/139 (35%), Positives = 80/139 (57%), Gaps = 4/139 (2%)

Query: 82  SDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEI 141
           SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   NI  E TL ++   +   +I
Sbjct: 14  SDTIENVKGKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQI 73

Query: 142 FVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIK 200
           FV+T T  T+ LEV  + TV +VK  ++  +  IP +   L   G+QL++ +TL+ Y+I+
Sbjct: 74  FVKTLTGKTITLEVEPSDTVENVKGKIQD-KEGIPPDQQRLIFAGKQLEDSRTLSDYNIQ 132

Query: 201 ENEVLQIIRHVKH--SIFV 217
           +   L ++  ++    IFV
Sbjct: 133 KESTLHLVLRLRGGCGIFV 151


>gi|30983942|gb|AAP40646.1| putative polyubiquitin [Gossypium barbadense]
          Length = 134

 Score = 81.3 bits (199), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 49/127 (38%), Positives = 75/127 (59%), Gaps = 3/127 (2%)

Query: 157 AHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS-- 214
           A T+ +VK  ++  +  IP +   L   G+QL++ +TLA Y+I++   L ++  ++    
Sbjct: 1   ADTIDNVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQ 59

Query: 215 IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIV 274
           IFVK L G+ I LEV   DT  +VK K+  + G  PD QRL+F  ++LED R LA Y I 
Sbjct: 60  IFVKTLTGKTITLEVESSDTTDNVKAKIQDKEGIPPDQQRLIFAGKELEDGRTLADYNIQ 119

Query: 275 NESIVNL 281
            ES ++L
Sbjct: 120 KESTLHL 126



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 47/130 (36%), Positives = 71/130 (54%), Gaps = 6/130 (4%)

Query: 6   TEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---NDSGVM 62
            + I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H      G M
Sbjct: 1   ADTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGM 58

Query: 63  KLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLN 122
           +++ KT +  KT  L+   SDT +N+K  I+ +EGIP  +  + + GK +E   TL   N
Sbjct: 59  QIFVKTLTG-KTITLEVESSDTTDNVKAKIQDKEGIPPDQQRLIFAGKELEDGRTLADYN 117

Query: 123 INNEDTLQMI 132
           I  E TL ++
Sbjct: 118 IQKESTLHLV 127



 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 43/128 (33%), Positives = 74/128 (57%), Gaps = 2/128 (1%)

Query: 82  SDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEI 141
           +DTI+N+K  I+ +EGIP  +  + + GK +E   TL   NI  E TL ++   +   +I
Sbjct: 1   ADTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQI 60

Query: 142 FVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIK 200
           FV+T T  T+ LEV  + T  +VK  ++  +  IP +   L   G++L++ +TLA Y+I+
Sbjct: 61  FVKTLTGKTITLEVESSDTTDNVKAKIQD-KEGIPPDQQRLIFAGKELEDGRTLADYNIQ 119

Query: 201 ENEVLQII 208
           +   L ++
Sbjct: 120 KESTLHLV 127


>gi|255965390|gb|ACU45000.1| unknown [Pfiesteria piscicida]
          Length = 133

 Score = 80.9 bits (198), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 46/110 (41%), Positives = 66/110 (60%), Gaps = 2/110 (1%)

Query: 174 IPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAK 231
           IP +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV  
Sbjct: 16  IPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVES 75

Query: 232 FDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
            DT+  VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 76  SDTIDMVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 125



 Score = 70.9 bits (172), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 47/129 (36%), Positives = 71/129 (55%), Gaps = 6/129 (4%)

Query: 7   EKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---NDSGVMK 63
           + I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H      G M+
Sbjct: 1   DTIDMVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQ 58

Query: 64  LYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNI 123
           ++ KT +  KT  L+   SDTI+ +K  I+ +EGIP  +  + + GK +E   TL   NI
Sbjct: 59  IFVKTLTG-KTITLEVESSDTIDMVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 117

Query: 124 NNEDTLQMI 132
             E TL ++
Sbjct: 118 QKESTLHLV 126



 Score = 65.5 bits (158), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 43/127 (33%), Positives = 72/127 (56%), Gaps = 2/127 (1%)

Query: 83  DTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEIF 142
           DTI+ +K  I+ +EGIP  +  + + GK +E   TL   NI  E TL ++   +   +IF
Sbjct: 1   DTIDMVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIF 60

Query: 143 VQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKE 201
           V+T T  T+ LEV  + T+  VK  ++  +  IP +   L   G+QL++ +TLA Y+I++
Sbjct: 61  VKTLTGKTITLEVESSDTIDMVKSKIQD-KEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 119

Query: 202 NEVLQII 208
              L ++
Sbjct: 120 ESTLHLV 126



 Score = 45.8 bits (107), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 24/49 (48%), Positives = 31/49 (63%)

Query: 233 DTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           DT+  VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 1   DTIDMVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 49


>gi|225704622|gb|ACO08157.1| Ubiquitin [Oncorhynchus mykiss]
          Length = 144

 Score = 80.9 bits (198), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 52/145 (35%), Positives = 81/145 (55%), Gaps = 13/145 (8%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV    T+ +VK  ++      P          +QL++ +TL+ Y+
Sbjct: 2   QIFVKTLTGKTITLEVEPGDTIENVKAKIQDKEGIPP----------DQLEDGRTLSDYN 51

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    IFVK L G+ I LEV   DT+ +V  K+  + G  PD QRL+
Sbjct: 52  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVMAKIQDKEGIPPDQQRLI 111

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F  +QLED R L+ Y I  ES ++L
Sbjct: 112 FAGKQLEDGRTLSDYNIQKESTLHL 136



 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/154 (30%), Positives = 82/154 (53%), Gaps = 12/154 (7%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+    DTIEN+K  I+ +EGIP  +         +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPGDTIENVKAKIQDKEGIPPDQ---------LEDGRTLSDY 50

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +V   ++  +  IP +   
Sbjct: 51  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVMAKIQD-KEGIPPDQQR 109

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
           L   G+QL++ +TL+ Y+I++   L ++  ++  
Sbjct: 110 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 143



 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 46/135 (34%), Positives = 70/135 (51%), Gaps = 15/135 (11%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+  + IE +K +I  K      E +P       QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPGDTIENVKAKIQDK------EGIPP-----DQLEDGRTLSDYNIQKESTLHLVLR 63

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTIEN+   I+ +EGIP  +  + + GK +E   T
Sbjct: 64  LRGGMQIFVKTLTG-KTITLEVEPSDTIENVMAKIQDKEGIPPDQQRLIFAGKQLEDGRT 122

Query: 118 LDVLNINNEDTLQMI 132
           L   NI  E TL ++
Sbjct: 123 LSDYNIQKESTLHLV 137


>gi|281203713|gb|EFA77909.1| ubiquitin/ribosomal protein S27a fusion protein [Polysphondylium
           pallidum PN500]
          Length = 167

 Score = 80.9 bits (198), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 51/147 (34%), Positives = 87/147 (59%), Gaps = 4/147 (2%)

Query: 136 KELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTL 194
           K + +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TL
Sbjct: 8   KLIMQIFVKTLTGKTITLEVEGSDTIENVKTKIQD-KEGIPPDQQRLIFAGKQLEDGRTL 66

Query: 195 AYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDS 252
           + Y+I++   L ++  ++    IF+K L G+ I L+V   D++ +VK K+  + G  PD 
Sbjct: 67  SDYNIQKESTLHLVLRLRGGMEIFIKSLTGKIITLKVEDSDSIENVKSKIQEKEGIPPDQ 126

Query: 253 QRLVFKRQQLEDDRNLASYKIVNESIV 279
           QRL+F  + L+D R L+ Y I  ES +
Sbjct: 127 QRLIFVGRILDDGRTLSDYNIQKESTL 153



 Score = 70.5 bits (171), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 47/132 (35%), Positives = 75/132 (56%), Gaps = 6/132 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 25  LEVEGSDTIENVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 82

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ K+ +  K   LK   SD+IEN+K  I+ +EGIP  +  + + G++++   T
Sbjct: 83  LRGGMEIFIKSLTG-KIITLKVEDSDSIENVKSKIQEKEGIPPDQQRLIFVGRILDDGRT 141

Query: 118 LDVLNINNEDTL 129
           L   NI  E TL
Sbjct: 142 LSDYNIQKESTL 153



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 87/156 (55%), Gaps = 4/156 (2%)

Query: 61  VMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDV 120
           +M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL  
Sbjct: 10  IMQIFVKTLTG-KTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 68

Query: 121 LNINNEDTLQMISVPKELQEIFVQTPTST-VKLEVRRAHTVLDVKKMVESMRICIPSEDC 179
            NI  E TL ++   +   EIF+++ T   + L+V  + ++ +VK  ++  +  IP +  
Sbjct: 69  YNIQKESTLHLVLRLRGGMEIFIKSLTGKIITLKVEDSDSIENVKSKIQE-KEGIPPDQQ 127

Query: 180 ELFRGGEQLQNLKTLAYYDI-KENEVLQIIRHVKHS 214
            L   G  L + +TL+ Y+I KE+ ++  +   +HS
Sbjct: 128 RLIFVGRILDDGRTLSDYNIQKESTLIWFVSKARHS 163



 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/67 (49%), Positives = 43/67 (64%)

Query: 215 IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIV 274
           IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+F  +QLED R L+ Y I 
Sbjct: 13  IFVKTLTGKTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 72

Query: 275 NESIVNL 281
            ES ++L
Sbjct: 73  KESTLHL 79


>gi|357151131|ref|XP_003575690.1| PREDICTED: LOW QUALITY PROTEIN: polyubiquitin 4-like [Brachypodium
           distachyon]
          Length = 380

 Score = 80.9 bits (198), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 82/271 (30%), Positives = 128/271 (47%), Gaps = 25/271 (9%)

Query: 29  PELFYAGQQLENG---------LTVIDYGIPNNSVIHNDSGVMKLYFKTPSNEKTFELKA 79
           P    AG  L  G         LT+ DY I + S +      M++Y       +T  L+ 
Sbjct: 33  PATPAAGAGLGPGSSTLLWPCNLTLADYNIEHGSTLDLQEK-MQIYVMRRKQGRTITLEV 91

Query: 80  NRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIE-SYITLDVLNINNEDTLQMISVPKEL 138
           +  DTI+ +K  I+V+EG P  +  + +G K +E   +TL   NI  E T+ ++     L
Sbjct: 92  DSLDTIDEVKSKIQVKEGFPKGQQCLIFGNKQLEDGELTLADHNIWKESTILLV-----L 146

Query: 139 QEIFVQT-PTSTVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYY 197
           + IFVQT    T+ L V    TV DVK  +       P +   L   G+Q+++ +TLA Y
Sbjct: 147 KXIFVQTMRGGTITLNVESTDTVNDVKVKIYEKDGTRPIQQ-RLIFCGKQMEDDRTLADY 205

Query: 198 DIKENEVLQIIRHVKHS-----IFVKLLNGRYII-LEVAKFDTVRDVKDKLFREIGQAPD 251
           +I+    L +   ++       I+V     R+ I LEV   DT+ +VK K+  + G    
Sbjct: 206 NIENGRTLDVKLKLQGGRYAMQIYVMETRARWTIALEVDSLDTIDEVKSKIQVKEGFPKV 265

Query: 252 SQRLVFKRQQLEDDR-NLASYKIVNESIVNL 281
            Q L+F  +QL+D +  LA + I  ES + L
Sbjct: 266 QQCLIFDNKQLDDGKFTLADHNIWRESTILL 296



 Score = 79.7 bits (195), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 86/297 (28%), Positives = 145/297 (48%), Gaps = 28/297 (9%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPE----LFYAGQQLENG-LTVIDYGIPNNSVI 55
           ++V   + I+++K +I  K      E  P+    L +  +QLE+G LT+ D+ I   S I
Sbjct: 89  LEVDSLDTIDEVKSKIQVK------EGFPKGQQCLIFGNKQLEDGELTLADHNIWKESTI 142

Query: 56  HNDSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESY 115
                V+K  F       T  L    +DT+ ++K  I  ++G    +  + + GK +E  
Sbjct: 143 LL---VLKXIFVQTMRGGTITLNVESTDTVNDVKVKIYEKDGTRPIQQRLIFCGKQMEDD 199

Query: 116 ITLDVLNINNEDTLQM---ISVPKELQEIFVQTPTS--TVKLEVRRAHTVLDVKKMVESM 170
            TL   NI N  TL +   +   +   +I+V    +  T+ LEV    T+ +VK  ++  
Sbjct: 200 RTLADYNIENGRTLDVKLKLQGGRYAMQIYVMETRARWTIALEVDSLDTIDEVKSKIQVK 259

Query: 171 RICIPSEDCELFRGGEQLQNLK-TLAYYDI-KENEVLQII------RHVKHSIFVKLLNG 222
                 + C +F   +QL + K TLA ++I +E+ +L ++      R     I V+ ++G
Sbjct: 260 EGFPKVQQCLIFDN-KQLDDGKFTLADHNIWRESTILLVLLQPSPTRGTTMRICVRTMDG 318

Query: 223 RYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIV 279
           + I L+V   DTV DVK K++ + G  P  QRL+ +  +L DD  LA Y+I   SI+
Sbjct: 319 KEIPLDVESSDTVDDVKMKIYEKDGTRPVQQRLIHEGIRLLDDYTLADYEIEKGSII 375


>gi|290983078|ref|XP_002674256.1| polyubiquitin [Naegleria gruberi]
 gi|284087845|gb|EFC41512.1| polyubiquitin [Naegleria gruberi]
          Length = 152

 Score = 80.9 bits (198), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 47/145 (32%), Positives = 87/145 (60%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           ++FV+T T  T+ LEV    ++ +VK+ V+      P +   +F  G+QL++ +T+  Y+
Sbjct: 2   QLFVKTLTGRTITLEVESNDSIENVKRKVQDKEGISPDQQRLIF-AGKQLEDGRTINDYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I+++  L ++  ++    +FVK L G+ I +E+   DTV ++K K+F + G   D QRL+
Sbjct: 61  IQKDSTLHLVLRLRGGMQLFVKTLTGKTITIEMESIDTVENMKQKIFDKEGIPSDQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           +  +QLED R ++ Y +  +S V+L
Sbjct: 121 YAGKQLEDGRTISDYNLQKDSTVHL 145



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 45/135 (33%), Positives = 75/135 (55%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+  + IE +K ++  K  E I  D   L +AG+QLE+G T+ DY I  +S +H    
Sbjct: 15  LEVESNDSIENVKRKVQDK--EGISPDQQRLIFAGKQLEDGRTINDYNIQKDSTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+L+ KT +  KT  ++    DT+EN+K  I  +EGIP  +  + Y GK +E   T
Sbjct: 73  LRGGMQLFVKTLTG-KTITIEMESIDTVENMKQKIFDKEGIPSDQQRLIYAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMI 132
           +   N+  + T+ ++
Sbjct: 132 ISDYNLQKDSTVHLV 146



 Score = 63.9 bits (154), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 40/148 (27%), Positives = 87/148 (58%), Gaps = 3/148 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+L+ KT +  +T  L+   +D+IEN+K  ++ +EGI   +  + + GK +E   T++  
Sbjct: 1   MQLFVKTLTG-RTITLEVESNDSIENVKRKVQDKEGISPDQQRLIFAGKQLEDGRTINDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  + TL ++   +   ++FV+T T  T+ +E+    TV ++K+ +   +  IPS+   
Sbjct: 60  NIQKDSTLHLVLRLRGGMQLFVKTLTGKTITIEMESIDTVENMKQKIFD-KEGIPSDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQII 208
           L   G+QL++ +T++ Y+++++  + ++
Sbjct: 119 LIYAGKQLEDGRTISDYNLQKDSTVHLV 146


>gi|290986589|ref|XP_002676006.1| polyubiquitin [Naegleria gruberi]
 gi|284089606|gb|EFC43262.1| polyubiquitin [Naegleria gruberi]
          Length = 153

 Score = 80.5 bits (197), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 46/145 (31%), Positives = 87/145 (60%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           ++FV+T T  T+ LEV    ++ +VK  ++      P +   +F GG+QL++ +T+  Y+
Sbjct: 2   QLFVKTLTGKTITLEVESNDSIENVKSKIQEKEGISPDQQRLIF-GGKQLEDGRTINDYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I+++  L ++  ++    +FVK L G+ I +E+   DT+ ++K K+F + G   D QRL+
Sbjct: 61  IQKDSTLHLVLRLRGGMQLFVKTLTGKTITIEMEANDTIENMKQKIFDKEGIPSDQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           +  +QLED R ++ Y +  +S V+L
Sbjct: 121 YAGKQLEDGRTISDYNLQKDSTVHL 145



 Score = 71.2 bits (173), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 48/136 (35%), Positives = 77/136 (56%), Gaps = 8/136 (5%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+  + IE +K +I  K  E I  D   L + G+QLE+G T+ DY I  +S +H    
Sbjct: 15  LEVESNDSIENVKSKIQEK--EGISPDQQRLIFGGKQLEDGRTINDYNIQKDSTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEK-TFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYI 116
             G M+L+ KT + +  T E++AN  DTIEN+K  I  +EGIP  +  + Y GK +E   
Sbjct: 73  LRGGMQLFVKTLTGKTITIEMEAN--DTIENMKQKIFDKEGIPSDQQRLIYAGKQLEDGR 130

Query: 117 TLDVLNINNEDTLQMI 132
           T+   N+  + T+ ++
Sbjct: 131 TISDYNLQKDSTVHLV 146



 Score = 67.8 bits (164), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 42/148 (28%), Positives = 88/148 (59%), Gaps = 3/148 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+L+ KT +  KT  L+   +D+IEN+K  I+ +EGI   +  + +GGK +E   T++  
Sbjct: 1   MQLFVKTLTG-KTITLEVESNDSIENVKSKIQEKEGISPDQQRLIFGGKQLEDGRTINDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  + TL ++   +   ++FV+T T  T+ +E+    T+ ++K+ +   +  IPS+   
Sbjct: 60  NIQKDSTLHLVLRLRGGMQLFVKTLTGKTITIEMEANDTIENMKQKIFD-KEGIPSDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQII 208
           L   G+QL++ +T++ Y+++++  + ++
Sbjct: 119 LIYAGKQLEDGRTISDYNLQKDSTVHLV 146


>gi|428168160|gb|EKX37108.1| ubiquitin [Guillardia theta CCMP2712]
          Length = 199

 Score = 80.5 bits (197), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 46/110 (41%), Positives = 66/110 (60%), Gaps = 2/110 (1%)

Query: 174 IPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAK 231
           IP +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV  
Sbjct: 12  IPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVES 71

Query: 232 FDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
            DT+  VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 72  SDTIDMVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 121



 Score = 70.9 bits (172), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 43/115 (37%), Positives = 64/115 (55%), Gaps = 4/115 (3%)

Query: 21  EEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---NDSGVMKLYFKTPSNEKTFEL 77
           +E I  D   L +AG+QLE+G T+ DY I   S +H      G M+++ KT +  KT  L
Sbjct: 9   KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG-KTITL 67

Query: 78  KANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMI 132
           +   SDTI+ +K  I+ +EGIP  +  + + GK +E   TL   NI  E TL ++
Sbjct: 68  EVESSDTIDMVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 122



 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 40/122 (32%), Positives = 67/122 (54%), Gaps = 2/122 (1%)

Query: 88  IKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEIFVQTPT 147
           +K  I+ +EGIP  +  + + GK +E   TL   NI  E TL ++   +   +IFV+T T
Sbjct: 2   VKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLT 61

Query: 148 S-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQ 206
             T+ LEV  + T+  VK  ++     IP +   L   G+QL++ +TLA Y+I++   L 
Sbjct: 62  GKTITLEVESSDTIDMVKSKIQDKEG-IPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 120

Query: 207 II 208
           ++
Sbjct: 121 LV 122



 Score = 43.9 bits (102), Expect = 0.082,   Method: Compositional matrix adjust.
 Identities = 22/44 (50%), Positives = 28/44 (63%)

Query: 238 VKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 2   VKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 45


>gi|339232996|ref|XP_003381615.1| ubiquitin family protein [Trichinella spiralis]
 gi|316979549|gb|EFV62331.1| ubiquitin family protein [Trichinella spiralis]
          Length = 189

 Score = 80.5 bits (197), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 44/110 (40%), Positives = 67/110 (60%), Gaps = 2/110 (1%)

Query: 174 IPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAK 231
           IP +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV  
Sbjct: 34  IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEP 93

Query: 232 FDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
            DT+ +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 94  SDTIENVKGKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 143



 Score = 76.3 bits (186), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 51/133 (38%), Positives = 73/133 (54%), Gaps = 6/133 (4%)

Query: 3   VKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---NDS 59
           V  ++ IE  K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H      
Sbjct: 15  VHPSDSIENEKGKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 72

Query: 60  GVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLD 119
           G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL 
Sbjct: 73  GGMQIFVKTLTG-KTITLEVEPSDTIENVKGKIQDKEGIPPDQQRLIFAGKQLEDGRTLS 131

Query: 120 VLNINNEDTLQMI 132
             NI  E TL ++
Sbjct: 132 DYNIQKESTLHLV 144



 Score = 67.8 bits (164), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 44/135 (32%), Positives = 77/135 (57%), Gaps = 2/135 (1%)

Query: 82  SDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEI 141
           SD+IEN K  I+ +EGIP  +  + + GK +E   TL   NI  E TL ++   +   +I
Sbjct: 18  SDSIENEKGKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQI 77

Query: 142 FVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIK 200
           FV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TL+ Y+I+
Sbjct: 78  FVKTLTGKTITLEVEPSDTIENVKGKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 136

Query: 201 ENEVLQIIRHVKHSI 215
           +   L ++  ++  +
Sbjct: 137 KESTLHLVLRLRGGM 151



 Score = 43.1 bits (100), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 21/49 (42%), Positives = 31/49 (63%)

Query: 233 DTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           D++ + K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 19  DSIENEKGKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 67


>gi|149063233|gb|EDM13556.1| rCG21222, isoform CRA_b [Rattus norvegicus]
          Length = 179

 Score = 80.5 bits (197), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 45/115 (39%), Positives = 69/115 (60%), Gaps = 2/115 (1%)

Query: 169 SMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYII 226
           + R  IP +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I 
Sbjct: 8   TRREGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIT 67

Query: 227 LEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           LEV   DT+ +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 68  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 122



 Score = 80.5 bits (197), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 53/137 (38%), Positives = 77/137 (56%), Gaps = 5/137 (3%)

Query: 22  EEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---NDSGVMKLYFKTPSNEKTFELK 78
           E I  D   L +AG+QLE+G T+ DY I   S +H      G M+++ KT +  KT  L+
Sbjct: 11  EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG-KTITLE 69

Query: 79  ANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMISVPKEL 138
              SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   NI  E TL ++   +  
Sbjct: 70  VEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 129

Query: 139 QEIFVQTPTS-TVKLEV 154
            +IFV+T T  T+ L+V
Sbjct: 130 MQIFVKTLTGKTITLDV 146



 Score = 71.2 bits (173), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 49/148 (33%), Positives = 81/148 (54%), Gaps = 4/148 (2%)

Query: 95  REGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLE 153
           REGIP  +  + + GK +E   TL   NI  E TL ++   +   +IFV+T T  T+ LE
Sbjct: 10  REGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 69

Query: 154 VRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKH 213
           V  + T+ +VK  ++  +  IP +   L   G+QL++ +TL+ Y+I++   L ++  ++ 
Sbjct: 70  VEPSDTIENVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRG 128

Query: 214 S--IFVKLLNGRYIILEVAKFDTVRDVK 239
              IFVK L G+ I L+V      + VK
Sbjct: 129 GMQIFVKTLTGKTITLDVEPSVNTKKVK 156



 Score = 42.4 bits (98), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 5/71 (7%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 68  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 125

Query: 58  DSGVMKLYFKT 68
             G M+++ KT
Sbjct: 126 LRGGMQIFVKT 136


>gi|323208|gb|AAA42855.1| nonstructural protein; putative helicase/protease; contains
            duplication; contains ubiquitin-coding region; putative,
            partial [Bovine viral diarrhea virus 1]
          Length = 1896

 Score = 80.5 bits (197), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 44/110 (40%), Positives = 67/110 (60%), Gaps = 2/110 (1%)

Query: 174  IPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAK 231
            IP +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV  
Sbjct: 949  IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEP 1008

Query: 232  FDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
             DT+ +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 1009 SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 1058



 Score = 74.3 bits (181), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 49/129 (37%), Positives = 71/129 (55%), Gaps = 5/129 (3%)

Query: 7    EKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---NDSGVMK 63
            E +E  K  +H   +E I  D   L +AG+QLE+G T+ DY I   S +H      G M+
Sbjct: 933  ENVEAAKGYVHQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 991

Query: 64   LYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNI 123
            ++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   NI
Sbjct: 992  IFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 1050

Query: 124  NNEDTLQMI 132
              E TL ++
Sbjct: 1051 QKESTLHLV 1059



 Score = 57.4 bits (137), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 37/120 (30%), Positives = 68/120 (56%), Gaps = 2/120 (1%)

Query: 90   FIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEIFVQTPTS- 148
            ++ + +EGIP  +  + + GK +E   TL   NI  E TL ++   +   +IFV+T T  
Sbjct: 941  YVHQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK 1000

Query: 149  TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQII 208
            T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TL+ Y+I++   L ++
Sbjct: 1001 TITLEVEPSDTIENVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 1059


>gi|5523985|gb|AAD44045.1|AF104028_1 polyprotein [Bovine viral diarrhea virus 2]
          Length = 357

 Score = 80.1 bits (196), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 44/110 (40%), Positives = 67/110 (60%), Gaps = 2/110 (1%)

Query: 174 IPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAK 231
           IP +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV  
Sbjct: 184 IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEP 243

Query: 232 FDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
            DT+ +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 244 SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSGYNIQKESTLHL 293



 Score = 72.0 bits (175), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 45/114 (39%), Positives = 64/114 (56%), Gaps = 4/114 (3%)

Query: 22  EEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---NDSGVMKLYFKTPSNEKTFELK 78
           E I  D   L +AG+QLE+G T+ DY I   S +H      G M+++ KT +  KT  L+
Sbjct: 182 EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG-KTITLE 240

Query: 79  ANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMI 132
              SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   NI  E TL ++
Sbjct: 241 VEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSGYNIQKESTLHLV 294



 Score = 58.2 bits (139), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 67/120 (55%), Gaps = 2/120 (1%)

Query: 90  FIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEIFVQTPTS- 148
           F I+  EGIP  +  + + GK +E   TL   NI  E TL ++   +   +IFV+T T  
Sbjct: 176 FKIQDNEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK 235

Query: 149 TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQII 208
           T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TL+ Y+I++   L ++
Sbjct: 236 TITLEVEPSDTIENVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSGYNIQKESTLHLV 294


>gi|326522440|dbj|BAK07682.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 293

 Score = 80.1 bits (196), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 70/234 (29%), Positives = 110/234 (47%), Gaps = 20/234 (8%)

Query: 57  NDSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYI 116
           +D   + ++ K P+  K      + SDT+  IK  I+ R       Y +   G  +E   
Sbjct: 66  DDPSKVHIFVKNPAGRKICLRGVHLSDTVYTIKAKIQER-------YRLVLDGVQLEDNR 118

Query: 117 TLDVLNINNEDTLQMISVPKELQEIFVQTP--TSTVKLEVRRAHTVLDVKKMVESMRICI 174
           TL    + ++ TL +    +E  +IFV       T+ LEV    T+  VK  +E +    
Sbjct: 119 TLADYGVQHDSTLDL----QEKMQIFVMETLEGRTITLEVDSLDTIDKVKAKIEDIEGFP 174

Query: 175 PSEDCELFRGGEQLQNLK-TLAYYDIKENEVLQII-----RHVKHSIFVKLLNGRYIILE 228
             + C +F   +QL + K TL  ++I +   L +I       V   +F+K+  G  + L+
Sbjct: 175 KVQQCLIF-ANKQLDDGKLTLEDHNIGKGSTLLLILLPCNPTVVMELFIKMWRGNTLTLK 233

Query: 229 VAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNLT 282
           V + DT+  VK K++   G  P  QRL+F   QLED R LA YKI  ES ++L 
Sbjct: 234 VGRSDTIGSVKVKIYEHDGIPPRQQRLIFAGTQLEDHRTLADYKIQQESTIHLA 287



 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 59/198 (29%), Positives = 101/198 (51%), Gaps = 14/198 (7%)

Query: 16  IHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIHNDSGVMKLYFKTPSNEKTF 75
           I AK++E        L   G QLE+  T+ DYG+ ++S + +    M+++       +T 
Sbjct: 97  IKAKIQERY-----RLVLDGVQLEDNRTLADYGVQHDSTL-DLQEKMQIFVMETLEGRTI 150

Query: 76  ELKANRSDTIENIKFIIEVREGIP-VHEYDIYYGGKLIESYITLDVLNINNEDTLQMISV 134
            L+ +  DTI+ +K  IE  EG P V +  I+   +L +  +TL+  NI    TL +I +
Sbjct: 151 TLEVDSLDTIDKVKAKIEDIEGFPKVQQCLIFANKQLDDGKLTLEDHNIGKGSTLLLILL 210

Query: 135 PKE---LQEIFVQTP-TSTVKLEVRRAHTVLDVK-KMVESMRICIPSEDCELFRGGEQLQ 189
           P     + E+F++    +T+ L+V R+ T+  VK K+ E     IP     L   G QL+
Sbjct: 211 PCNPTVVMELFIKMWRGNTLTLKVGRSDTIGSVKVKIYE--HDGIPPRQQRLIFAGTQLE 268

Query: 190 NLKTLAYYDIKENEVLQI 207
           + +TLA Y I++   + +
Sbjct: 269 DHRTLADYKIQQESTIHL 286


>gi|89114278|gb|ABD61727.1| polyubiquitin [Lupinus albus]
          Length = 132

 Score = 80.1 bits (196), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 51/133 (38%), Positives = 76/133 (57%), Gaps = 5/133 (3%)

Query: 31  LFYAGQQLENGLTVIDYGIPNNSVIH---NDSGVMKLYFKTPSNEKTFELKANRSDTIEN 87
           L +AG+QLE+G T+ DY I   S +H      G M+++ KT +  KT  L+   SDTI+N
Sbjct: 1   LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG-KTITLEVESSDTIDN 59

Query: 88  IKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEIFVQTPT 147
           +K  I+ +EGIP  +  + + GK +E   TL   NI  E TL ++   +   +IFV+T T
Sbjct: 60  VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLT 119

Query: 148 S-TVKLEVRRAHT 159
             T+ LEV  + T
Sbjct: 120 GKTITLEVESSDT 132



 Score = 78.6 bits (192), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 44/103 (42%), Positives = 64/103 (62%), Gaps = 2/103 (1%)

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 1   LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 60

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 61  KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 103



 Score = 67.0 bits (162), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 46/133 (34%), Positives = 74/133 (55%), Gaps = 4/133 (3%)

Query: 105 IYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDV 163
           + + GK +E   TL   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +V
Sbjct: 1   LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 60

Query: 164 KKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLN 221
           K  ++  +  IP +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L 
Sbjct: 61  KAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLT 119

Query: 222 GRYIILEVAKFDT 234
           G+ I LEV   DT
Sbjct: 120 GKTITLEVESSDT 132



 Score = 46.2 bits (108), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 31/87 (35%), Positives = 49/87 (56%), Gaps = 6/87 (6%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 49  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 106

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDT 84
             G M+++ KT +  KT  L+   SDT
Sbjct: 107 LRGGMQIFVKTLTG-KTITLEVESSDT 132


>gi|83944648|gb|ABC48928.1| ubiquitin [Eisenia fetida]
          Length = 121

 Score = 80.1 bits (196), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 44/110 (40%), Positives = 67/110 (60%), Gaps = 2/110 (1%)

Query: 174 IPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAK 231
           IP +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV  
Sbjct: 11  IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEP 70

Query: 232 FDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
            DT+ +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 71  SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 120



 Score = 75.1 bits (183), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 49/124 (39%), Positives = 69/124 (55%), Gaps = 6/124 (4%)

Query: 12  LKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---NDSGVMKLYFKT 68
           LK +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H      G M+++ KT
Sbjct: 1   LKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKT 58

Query: 69  PSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDT 128
            +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   NI  E T
Sbjct: 59  LTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST 117

Query: 129 LQMI 132
           L ++
Sbjct: 118 LHLV 121



 Score = 60.5 bits (145), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 39/122 (31%), Positives = 69/122 (56%), Gaps = 2/122 (1%)

Query: 88  IKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEIFVQTPT 147
           +K  I+ +EGIP  +  + + GK +E   TL   NI  E TL ++   +   +IFV+T T
Sbjct: 1   LKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLT 60

Query: 148 S-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQ 206
             T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TL+ Y+I++   L 
Sbjct: 61  GKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 119

Query: 207 II 208
           ++
Sbjct: 120 LV 121



 Score = 40.0 bits (92), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 20/44 (45%), Positives = 28/44 (63%)

Query: 238 VKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           +K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 1   LKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 44


>gi|5523987|gb|AAD44046.1|AF104029_1 polyprotein [Bovine viral diarrhea virus 2]
          Length = 395

 Score = 79.7 bits (195), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 44/110 (40%), Positives = 67/110 (60%), Gaps = 2/110 (1%)

Query: 174 IPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAK 231
           IP +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV  
Sbjct: 222 IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEP 281

Query: 232 FDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
            DT+ +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 282 SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 331



 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 53/154 (34%), Positives = 77/154 (50%), Gaps = 24/154 (15%)

Query: 2   KVKKTEKIEKLKLRIHAKVEEE--------------------ILEDLPELFYAGQQLENG 41
           K  K ++IEK K++I  K  E+                    I  D   L +AG+QLE+G
Sbjct: 180 KQPKPDRIEKGKMKIAPKETEKDSKTRPPDVTDYFKIQDKEGIPPDQQRLIFAGKQLEDG 239

Query: 42  LTVIDYGIPNNSVIH---NDSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGI 98
            T+ DY I   S +H      G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGI
Sbjct: 240 RTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGI 298

Query: 99  PVHEYDIYYGGKLIESYITLDVLNINNEDTLQMI 132
           P  +  + + GK +E   TL   NI  E TL ++
Sbjct: 299 PPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 332



 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 68/120 (56%), Gaps = 2/120 (1%)

Query: 90  FIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEIFVQTPTS- 148
           F I+ +EGIP  +  + + GK +E   TL   NI  E TL ++   +   +IFV+T T  
Sbjct: 214 FKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK 273

Query: 149 TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQII 208
           T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TL+ Y+I++   L ++
Sbjct: 274 TITLEVEPSDTIENVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 332


>gi|281210011|gb|EFA84179.1| ubiquitin [Polysphondylium pallidum PN500]
          Length = 155

 Score = 79.7 bits (195), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 50/146 (34%), Positives = 87/146 (59%), Gaps = 4/146 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + ++ +VK  ++  +  IP +   L   G+QL++ +TL+ Y+
Sbjct: 2   QIFVKTLTGKTITLEVEGSDSIENVKIKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I +   L ++  ++    +FV+ LNG+ I LEV + DT+ +VK K+  ++G  P  Q L+
Sbjct: 61  ILKESTLHLVLRLRGGMQVFVETLNGKIITLEVEESDTIENVKAKVTEKLGYPPTQQNLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNLT 282
             +++LE+ R L  Y I  ES + LT
Sbjct: 121 CNKKKLENGRTLFDYNIQKESKIYLT 146



 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 45/141 (31%), Positives = 78/141 (55%), Gaps = 3/141 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SD+IEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEGSDSIENVKIKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTST-VKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   ++FV+T     + LEV  + T+ +VK  V + ++  P     
Sbjct: 60  NILKESTLHLVLRLRGGMQVFVETLNGKIITLEVEESDTIENVKAKV-TEKLGYPPTQQN 118

Query: 181 LFRGGEQLQNLKTLAYYDIKE 201
           L    ++L+N +TL  Y+I++
Sbjct: 119 LICNKKKLENGRTLFDYNIQK 139



 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 44/129 (34%), Positives = 70/129 (54%), Gaps = 6/129 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K++I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEGSDSIENVKIKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNILKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ +T  N K   L+   SDTIEN+K  +  + G P  + ++    K +E+  T
Sbjct: 73  LRGGMQVFVET-LNGKIITLEVEESDTIENVKAKVTEKLGYPPTQQNLICNKKKLENGRT 131

Query: 118 LDVLNINNE 126
           L   NI  E
Sbjct: 132 LFDYNIQKE 140


>gi|5523977|gb|AAD44041.1|AF104024_1 polyprotein [Bovine viral diarrhea virus 2]
          Length = 365

 Score = 79.7 bits (195), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 44/110 (40%), Positives = 67/110 (60%), Gaps = 2/110 (1%)

Query: 174 IPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAK 231
           IP +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV  
Sbjct: 192 IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEP 251

Query: 232 FDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
            DT+ +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 252 SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 301



 Score = 71.6 bits (174), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 45/116 (38%), Positives = 65/116 (56%), Gaps = 4/116 (3%)

Query: 20  VEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---NDSGVMKLYFKTPSNEKTFE 76
           V+  I  D   L +AG+QLE+G T+ DY I   S +H      G M+++ KT +  KT  
Sbjct: 188 VKGGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG-KTIT 246

Query: 77  LKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMI 132
           L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   NI  E TL ++
Sbjct: 247 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 302



 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/116 (31%), Positives = 65/116 (56%), Gaps = 2/116 (1%)

Query: 94  VREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKL 152
           V+ GIP  +  + + GK +E   TL   NI  E TL ++   +   +IFV+T T  T+ L
Sbjct: 188 VKGGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL 247

Query: 153 EVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQII 208
           EV  + T+ +VK  ++  +  IP +   L   G+QL++ +TL+ Y+I++   L ++
Sbjct: 248 EVEPSDTIENVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 302



 Score = 40.4 bits (93), Expect = 0.96,   Method: Compositional matrix adjust.
 Identities = 18/35 (51%), Positives = 23/35 (65%)

Query: 247 GQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 191 GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 225


>gi|290980934|ref|XP_002673186.1| polyubiquitin [Naegleria gruberi]
 gi|284086768|gb|EFC40442.1| polyubiquitin [Naegleria gruberi]
          Length = 152

 Score = 79.7 bits (195), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 47/145 (32%), Positives = 86/145 (59%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           ++FV+T T  T+ LEV    ++ +VK+ V+      P +   +F  G+QL++ +T+  Y+
Sbjct: 2   QLFVKTLTGITITLEVESNDSIENVKRKVQDKEGISPDQQRLIF-AGKQLEDGRTINDYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I+++  L ++  ++    +FVK L G+ I +E+   DTV ++K K+F + G   D QRL+
Sbjct: 61  IQKDSTLHLVLRLRGGMQLFVKTLTGKTITIEMESNDTVENMKQKIFDKEGIPSDQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           +  +QLED R +  Y +  +S V+L
Sbjct: 121 YAGKQLEDGRTIGDYNLQKDSTVHL 145



 Score = 70.5 bits (171), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 45/135 (33%), Positives = 76/135 (56%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+  + IE +K ++  K  E I  D   L +AG+QLE+G T+ DY I  +S +H    
Sbjct: 15  LEVESNDSIENVKRKVQDK--EGISPDQQRLIFAGKQLEDGRTINDYNIQKDSTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+L+ KT +  KT  ++   +DT+EN+K  I  +EGIP  +  + Y GK +E   T
Sbjct: 73  LRGGMQLFVKTLTG-KTITIEMESNDTVENMKQKIFDKEGIPSDQQRLIYAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMI 132
           +   N+  + T+ ++
Sbjct: 132 IGDYNLQKDSTVHLV 146



 Score = 61.6 bits (148), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 40/148 (27%), Positives = 85/148 (57%), Gaps = 3/148 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+L+ KT +   T  L+   +D+IEN+K  ++ +EGI   +  + + GK +E   T++  
Sbjct: 1   MQLFVKTLTG-ITITLEVESNDSIENVKRKVQDKEGISPDQQRLIFAGKQLEDGRTINDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  + TL ++   +   ++FV+T T  T+ +E+    TV ++K+ +   +  IPS+   
Sbjct: 60  NIQKDSTLHLVLRLRGGMQLFVKTLTGKTITIEMESNDTVENMKQKIFD-KEGIPSDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQII 208
           L   G+QL++ +T+  Y+++++  + ++
Sbjct: 119 LIYAGKQLEDGRTIGDYNLQKDSTVHLV 146


>gi|290971589|ref|XP_002668572.1| polyubiquitin [Naegleria gruberi]
 gi|290973569|ref|XP_002669520.1| polyubiquitin [Naegleria gruberi]
 gi|290982657|ref|XP_002674046.1| polyubiquitin [Naegleria gruberi]
 gi|290987245|ref|XP_002676333.1| polyubiquitin [Naegleria gruberi]
 gi|290987329|ref|XP_002676375.1| polyubiquitin [Naegleria gruberi]
 gi|290997377|ref|XP_002681258.1| polyubiquitin [Naegleria gruberi]
 gi|284082037|gb|EFC35828.1| polyubiquitin [Naegleria gruberi]
 gi|284083069|gb|EFC36776.1| polyubiquitin [Naegleria gruberi]
 gi|284087634|gb|EFC41302.1| polyubiquitin [Naegleria gruberi]
 gi|284089935|gb|EFC43589.1| polyubiquitin [Naegleria gruberi]
 gi|284089977|gb|EFC43631.1| polyubiquitin [Naegleria gruberi]
 gi|284094881|gb|EFC48514.1| polyubiquitin [Naegleria gruberi]
          Length = 152

 Score = 79.7 bits (195), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 47/145 (32%), Positives = 86/145 (59%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           ++FV+T T  T+ LEV    ++ +VK+ V+      P +   +F  G+QL++ +T+  Y+
Sbjct: 2   QLFVKTLTGRTITLEVESNDSIENVKRKVQDKEGISPDQQRLIF-AGKQLEDGRTINDYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I+++  L ++  ++    +FVK L G+ I +E+   DTV ++K K+F + G   D QRL+
Sbjct: 61  IQKDSTLHLVLRLRGGMQLFVKTLTGKTITIEMESNDTVENMKQKIFDKEGIPSDQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           +  +QLED R +  Y +  +S V+L
Sbjct: 121 YAGKQLEDGRTIGDYNLQKDSTVHL 145



 Score = 70.9 bits (172), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 45/135 (33%), Positives = 76/135 (56%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+  + IE +K ++  K  E I  D   L +AG+QLE+G T+ DY I  +S +H    
Sbjct: 15  LEVESNDSIENVKRKVQDK--EGISPDQQRLIFAGKQLEDGRTINDYNIQKDSTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+L+ KT +  KT  ++   +DT+EN+K  I  +EGIP  +  + Y GK +E   T
Sbjct: 73  LRGGMQLFVKTLTG-KTITIEMESNDTVENMKQKIFDKEGIPSDQQRLIYAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMI 132
           +   N+  + T+ ++
Sbjct: 132 IGDYNLQKDSTVHLV 146



 Score = 64.3 bits (155), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 40/148 (27%), Positives = 86/148 (58%), Gaps = 3/148 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+L+ KT +  +T  L+   +D+IEN+K  ++ +EGI   +  + + GK +E   T++  
Sbjct: 1   MQLFVKTLTG-RTITLEVESNDSIENVKRKVQDKEGISPDQQRLIFAGKQLEDGRTINDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  + TL ++   +   ++FV+T T  T+ +E+    TV ++K+ +   +  IPS+   
Sbjct: 60  NIQKDSTLHLVLRLRGGMQLFVKTLTGKTITIEMESNDTVENMKQKIFD-KEGIPSDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQII 208
           L   G+QL++ +T+  Y+++++  + ++
Sbjct: 119 LIYAGKQLEDGRTIGDYNLQKDSTVHLV 146


>gi|62701892|gb|AAX92965.1| Ubiquitin family, putative [Oryza sativa Japonica Group]
 gi|77550039|gb|ABA92836.1| Ubiquitin family protein [Oryza sativa Japonica Group]
          Length = 353

 Score = 79.7 bits (195), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 55/189 (29%), Positives = 98/189 (51%), Gaps = 14/189 (7%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M +  K PS  KT EL   +SD + ++K  IE++EGI +    + Y G+ +     L   
Sbjct: 152 MCISVKIPSIAKTIELSVKKSDIVADVKLQIELKEGIHLDNQILMYAGRHLGDSQILSEC 211

Query: 122 NINNEDTLQMISVPKELQEIFVQT-PTSTVKLEVRRAHTVLDVKKMVESM-------RIC 173
            ++++  L ++  P +   +++    T TV+++VR  +TV DVK MVE+M       +I 
Sbjct: 212 GLSDDHILHVLVSPADKMCVYINIRDTRTVRVDVRNWYTVADVKLMVETMFGFPECSQIL 271

Query: 174 IPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSIFVKLLNGRYIILEVAKFD 233
           +P++  +      +L   +TL   +IK N VL ++      IF+K   GR + + V+ F 
Sbjct: 272 LPTKSGDAI----ELNGTQTLKDQNIKNNAVLMLLP--DFPIFIKTWEGRTLTMVVSSFH 325

Query: 234 TVRDVKDKL 242
           T  D+ +K+
Sbjct: 326 TEEDIWEKI 334


>gi|380026660|ref|XP_003697063.1| PREDICTED: polyubiquitin-A-like, partial [Apis florea]
          Length = 130

 Score = 79.7 bits (195), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 44/111 (39%), Positives = 67/111 (60%), Gaps = 2/111 (1%)

Query: 173 CIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVA 230
            IP +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV 
Sbjct: 12  GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 71

Query: 231 KFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
             DT+ +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 72  ASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 122



 Score = 75.9 bits (185), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 49/126 (38%), Positives = 70/126 (55%), Gaps = 6/126 (4%)

Query: 10  EKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---NDSGVMKLYF 66
           E +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H      G M+++ 
Sbjct: 1   ENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFV 58

Query: 67  KTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNE 126
           KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   NI  E
Sbjct: 59  KTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 117

Query: 127 DTLQMI 132
            TL ++
Sbjct: 118 STLHLV 123



 Score = 65.5 bits (158), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 41/124 (33%), Positives = 71/124 (57%), Gaps = 2/124 (1%)

Query: 86  ENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEIFVQT 145
           EN+K  I+ +EGIP  +  + + GK +E   TL   NI  E TL ++   +   +IFV+T
Sbjct: 1   ENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKT 60

Query: 146 PTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEV 204
            T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TL+ Y+I++   
Sbjct: 61  LTGKTITLEVEASDTIENVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST 119

Query: 205 LQII 208
           L ++
Sbjct: 120 LHLV 123



 Score = 41.6 bits (96), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 21/45 (46%), Positives = 29/45 (64%)

Query: 237 DVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 2   NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 46


>gi|290991538|ref|XP_002678392.1| polyubiquitin [Naegleria gruberi]
 gi|284092004|gb|EFC45648.1| polyubiquitin [Naegleria gruberi]
          Length = 152

 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 47/145 (32%), Positives = 86/145 (59%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           ++FV+T T  T+ LEV    ++ +VK+ V+      P +   +F  G+QL++ +T+  Y+
Sbjct: 2   QLFVKTLTGRTITLEVESNDSIENVKQKVQDKEGISPDQQRLIF-AGKQLEDGRTINDYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I+++  L ++  ++    +FVK L G+ I +E+   DTV ++K K+F + G   D QRL+
Sbjct: 61  IQKDSTLHLVLRLRGGMQLFVKTLTGKTITIEMESNDTVENMKQKIFDKEGIPSDQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           +  +QLED R +  Y +  +S V+L
Sbjct: 121 YAGKQLEDGRTIGDYNLQKDSTVHL 145



 Score = 70.5 bits (171), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 45/135 (33%), Positives = 76/135 (56%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+  + IE +K ++  K  E I  D   L +AG+QLE+G T+ DY I  +S +H    
Sbjct: 15  LEVESNDSIENVKQKVQDK--EGISPDQQRLIFAGKQLEDGRTINDYNIQKDSTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+L+ KT +  KT  ++   +DT+EN+K  I  +EGIP  +  + Y GK +E   T
Sbjct: 73  LRGGMQLFVKTLTG-KTITIEMESNDTVENMKQKIFDKEGIPSDQQRLIYAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMI 132
           +   N+  + T+ ++
Sbjct: 132 IGDYNLQKDSTVHLV 146



 Score = 63.5 bits (153), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 40/148 (27%), Positives = 86/148 (58%), Gaps = 3/148 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+L+ KT +  +T  L+   +D+IEN+K  ++ +EGI   +  + + GK +E   T++  
Sbjct: 1   MQLFVKTLTG-RTITLEVESNDSIENVKQKVQDKEGISPDQQRLIFAGKQLEDGRTINDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  + TL ++   +   ++FV+T T  T+ +E+    TV ++K+ +   +  IPS+   
Sbjct: 60  NIQKDSTLHLVLRLRGGMQLFVKTLTGKTITIEMESNDTVENMKQKIFD-KEGIPSDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQII 208
           L   G+QL++ +T+  Y+++++  + ++
Sbjct: 119 LIYAGKQLEDGRTIGDYNLQKDSTVHLV 146


>gi|255966040|gb|ACU45305.1| polyubiquitin 6 [Rhodomonas sp. CCMP768]
          Length = 125

 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 45/110 (40%), Positives = 65/110 (59%), Gaps = 2/110 (1%)

Query: 174 IPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAK 231
           IP +       G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV  
Sbjct: 8   IPPDQQRWIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVES 67

Query: 232 FDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
            DT+  VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 68  SDTIDMVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 117



 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 42/115 (36%), Positives = 63/115 (54%), Gaps = 4/115 (3%)

Query: 21  EEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---NDSGVMKLYFKTPSNEKTFEL 77
           +E I  D     +AG+QLE+G T+ DY I   S +H      G M+++ KT +  KT  L
Sbjct: 5   KEGIPPDQQRWIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG-KTITL 63

Query: 78  KANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMI 132
           +   SDTI+ +K  I+ +EGIP  +  + + GK +E   TL   NI  E TL ++
Sbjct: 64  EVESSDTIDMVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 118



 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 39/118 (33%), Positives = 65/118 (55%), Gaps = 2/118 (1%)

Query: 92  IEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEIFVQTPTS-TV 150
           I+ +EGIP  +    + GK +E   TL   NI  E TL ++   +   +IFV+T T  T+
Sbjct: 2   IQDKEGIPPDQQRWIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTI 61

Query: 151 KLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQII 208
            LEV  + T+  VK  ++  +  IP +   L   G+QL++ +TLA Y+I++   L ++
Sbjct: 62  TLEVESSDTIDMVKSKIQD-KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 118



 Score = 39.7 bits (91), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 18/35 (51%), Positives = 22/35 (62%)

Query: 247 GQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           G  PD QR +F  +QLED R LA Y I  ES ++L
Sbjct: 7   GIPPDQQRWIFAGKQLEDGRTLADYNIQKESTLHL 41


>gi|145503723|ref|XP_001437835.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124404993|emb|CAK70438.1| unnamed protein product [Paramecium tetraurelia]
          Length = 271

 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 50/145 (34%), Positives = 86/145 (59%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ L+V  + T+  VK  ++  +  IP +   L   G+QL++ +TL+ Y+
Sbjct: 2   QIFVKTLTGKTITLDVEPSDTIDAVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    IF+K L GR I L+V   D+V  +K ++  + G  P+ QRL+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFIKTLTGRLINLDVESTDSVESLKKQIQDKEGIPPNQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F   QLED++ L  Y + NES ++L
Sbjct: 121 FSGHQLEDEKTLLEYNVENESTIHL 145



 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 75/135 (55%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LDVEPSDTIDAVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  +   L    +D++E++K  I+ +EGIP ++  + + G  +E   T
Sbjct: 73  LRGGMQIFIKTLTG-RLINLDVESTDSVESLKKQIQDKEGIPPNQQRLIFSGHQLEDEKT 131

Query: 118 LDVLNINNEDTLQMI 132
           L   N+ NE T+ ++
Sbjct: 132 LLEYNVENESTIHLV 146



 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 78/148 (52%), Gaps = 3/148 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L    SDTI+ +K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTST-VKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IF++T T   + L+V    +V  +KK ++  +  IP     
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFIKTLTGRLINLDVESTDSVESLKKQIQD-KEGIPPNQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQII 208
           L   G QL++ KTL  Y+++    + ++
Sbjct: 119 LIFSGHQLEDEKTLLEYNVENESTIHLV 146


>gi|111140007|gb|ABH06365.1| ubiquitin [Sorbus aucuparia]
          Length = 141

 Score = 79.0 bits (193), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 51/139 (36%), Positives = 81/139 (58%), Gaps = 4/139 (2%)

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 2   NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 60

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 61  LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 120

Query: 239 KDKLFREIGQAPDSQRLVF 257
           K K+  + G  PD QRL+F
Sbjct: 121 KAKIQDKEGIPPDQQRLIF 139



 Score = 67.4 bits (163), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 37/87 (42%), Positives = 53/87 (60%), Gaps = 2/87 (2%)

Query: 197 YDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQR 254
           Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QR
Sbjct: 1   YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 60

Query: 255 LVFKRQQLEDDRNLASYKIVNESIVNL 281
           L+F  +QLED R LA Y I  ES ++L
Sbjct: 61  LIFAGKQLEDGRTLADYNIQKESTLHL 87



 Score = 67.0 bits (162), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 47/142 (33%), Positives = 74/142 (52%), Gaps = 5/142 (3%)

Query: 47  YGIPNNSVIH---NDSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEY 103
           Y I   S +H      G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  + 
Sbjct: 1   YNIQKESTLHLVLRLRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQ 59

Query: 104 DIYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLD 162
            + + GK +E   TL   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +
Sbjct: 60  RLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDN 119

Query: 163 VKKMVESMRICIPSEDCELFRG 184
           VK  ++      P +   +F G
Sbjct: 120 VKAKIQDKEGIPPDQQRLIFAG 141



 Score = 65.1 bits (157), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 40/112 (35%), Positives = 65/112 (58%), Gaps = 6/112 (5%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 33  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 90

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGG 109
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + G
Sbjct: 91  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAG 141


>gi|387604502|gb|AFJ93197.1| ubiquitin, partial [Eremosparton songoricum]
          Length = 142

 Score = 79.0 bits (193), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 51/139 (36%), Positives = 81/139 (58%), Gaps = 4/139 (2%)

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 4   NIQRESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPPDQQR 62

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 63  LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 122

Query: 239 KDKLFREIGQAPDSQRLVF 257
           K K+  + G  PD QRL+F
Sbjct: 123 KTKIQDKEGIPPDQQRLIF 141



 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 48/142 (33%), Positives = 75/142 (52%), Gaps = 5/142 (3%)

Query: 45  IDYGIPNNSVIH---NDSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVH 101
           IDY I   S +H      G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  
Sbjct: 1   IDYNIQRESTLHLVLRLRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPD 59

Query: 102 EYDIYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTV 160
           +  + + GK +E   TL   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+
Sbjct: 60  QQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI 119

Query: 161 LDVKKMVESMRICIPSEDCELF 182
            +VK  ++      P +   +F
Sbjct: 120 DNVKTKIQDKEGIPPDQQRLIF 141



 Score = 67.0 bits (162), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 37/87 (42%), Positives = 52/87 (59%), Gaps = 2/87 (2%)

Query: 197 YDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQR 254
           Y+I+    L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QR
Sbjct: 3   YNIQRESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQR 62

Query: 255 LVFKRQQLEDDRNLASYKIVNESIVNL 281
           L+F  +QLED R LA Y I  ES ++L
Sbjct: 63  LIFAGKQLEDGRTLADYNIQKESTLHL 89



 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 39/111 (35%), Positives = 64/111 (57%), Gaps = 6/111 (5%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 35  LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 92

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYG 108
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + 
Sbjct: 93  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFA 142


>gi|281209949|gb|EFA84117.1| UBiQuitin family member isoform 1 [Polysphondylium pallidum PN500]
          Length = 156

 Score = 78.6 bits (192), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 47/145 (32%), Positives = 88/145 (60%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + ++ +VK  ++  +  IP +   L   G+QL++ +TL+ Y+
Sbjct: 2   QIFVKTLTGKTITLEVEGSDSIENVKTKIQD-KEGIPPDQQRLIFAGKQLEDERTLSDYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    +FV+ L+G+ I ++V + DT+ +VK K+  ++G  P+ Q L+
Sbjct: 61  IQKESTLHLVLRLRGGMQVFVETLSGKIITIKVKESDTIENVKAKVTEKLGYPPNEQILI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F  ++LE+ R L  Y I  ES + L
Sbjct: 121 FNNKKLENGRTLFDYNIQKESTIYL 145



 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 44/145 (30%), Positives = 81/145 (55%), Gaps = 3/145 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SD+IEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEGSDSIENVKTKIQDKEGIPPDQQRLIFAGKQLEDERTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTST-VKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   ++FV+T +   + ++V+ + T+ +VK  V       P+E   
Sbjct: 60  NIQKESTLHLVLRLRGGMQVFVETLSGKIITIKVKESDTIENVKAKVTEKLGYPPNEQIL 119

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVL 205
           +F   ++L+N +TL  Y+I++   +
Sbjct: 120 IF-NNKKLENGRTLFDYNIQKESTI 143



 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 45/132 (34%), Positives = 71/132 (53%), Gaps = 6/132 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+  T+ DY I   S +H    
Sbjct: 15  LEVEGSDSIENVKTKIQDK--EGIPPDQQRLIFAGKQLEDERTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ +T S  K   +K   SDTIEN+K  +  + G P +E  + +  K +E+  T
Sbjct: 73  LRGGMQVFVETLSG-KIITIKVKESDTIENVKAKVTEKLGYPPNEQILIFNNKKLENGRT 131

Query: 118 LDVLNINNEDTL 129
           L   NI  E T+
Sbjct: 132 LFDYNIQKESTI 143


>gi|123454695|ref|XP_001315099.1| polyubiquitin [Trichomonas vaginalis G3]
 gi|121897765|gb|EAY02876.1| polyubiquitin, putative [Trichomonas vaginalis G3]
          Length = 153

 Score = 78.6 bits (192), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 52/145 (35%), Positives = 80/145 (55%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTST-VKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T   + LEV     + DVK  ++  +  IP +   L   G+QL++  TL  Y 
Sbjct: 2   QIFVKTLTGKHITLEVEPTDRIEDVKAKIQD-KEDIPPDQQRLIFAGKQLEDGNTLQDYS 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I+++  L ++  ++    IFVK L G++I LEV   D + DVK K+  +    PD QRL+
Sbjct: 61  IQKDSTLHLVLRLRGGMQIFVKTLTGKHITLEVEPTDRIEDVKAKIQDKEDIPPDQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F  +QLED   L  Y I  +S ++L
Sbjct: 121 FAGKQLEDGNTLQDYSIQKDSTLHL 145



 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 45/135 (33%), Positives = 77/135 (57%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ T++IE +K +I  K  E+I  D   L +AG+QLE+G T+ DY I  +S +H    
Sbjct: 15  LEVEPTDRIEDVKAKIQDK--EDIPPDQQRLIFAGKQLEDGNTLQDYSIQKDSTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  K   L+   +D IE++K  I+ +E IP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTG-KHITLEVEPTDRIEDVKAKIQDKEDIPPDQQRLIFAGKQLEDGNT 131

Query: 118 LDVLNINNEDTLQMI 132
           L   +I  + TL ++
Sbjct: 132 LQDYSIQKDSTLHLV 146



 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 43/148 (29%), Positives = 78/148 (52%), Gaps = 3/148 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  K   L+   +D IE++K  I+ +E IP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KHITLEVEPTDRIEDVKAKIQDKEDIPPDQQRLIFAGKQLEDGNTLQDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTST-VKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           +I  + TL ++   +   +IFV+T T   + LEV     + DVK  ++  +  IP +   
Sbjct: 60  SIQKDSTLHLVLRLRGGMQIFVKTLTGKHITLEVEPTDRIEDVKAKIQD-KEDIPPDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQII 208
           L   G+QL++  TL  Y I+++  L ++
Sbjct: 119 LIFAGKQLEDGNTLQDYSIQKDSTLHLV 146


>gi|290974830|ref|XP_002670147.1| ubiquitin [Naegleria gruberi]
 gi|284083703|gb|EFC37403.1| ubiquitin [Naegleria gruberi]
          Length = 152

 Score = 78.6 bits (192), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 47/145 (32%), Positives = 86/145 (59%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           ++FV+T T  T+ LEV    ++ +VK+ V+      P +   +F  G+QL++ +T+  Y+
Sbjct: 2   QLFVKTLTGRTITLEVESNDSIENVKRKVQDKEGISPDQQRLIF-AGKQLEDGRTINDYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I+++  L ++  ++    +FVK L G+ I +E+   DTV ++K K+F + G   D QRL+
Sbjct: 61  IQKDSTLHLVLRLRGGMQLFVKTLTGKTITIEMESNDTVENMKQKIFDKEGIPSDQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           +  +QLED R +  Y +  +S V+L
Sbjct: 121 YAGKQLEDGRTINDYNLQKDSTVHL 145



 Score = 71.2 bits (173), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 45/135 (33%), Positives = 77/135 (57%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+  + IE +K ++  K  E I  D   L +AG+QLE+G T+ DY I  +S +H    
Sbjct: 15  LEVESNDSIENVKRKVQDK--EGISPDQQRLIFAGKQLEDGRTINDYNIQKDSTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+L+ KT +  KT  ++   +DT+EN+K  I  +EGIP  +  + Y GK +E   T
Sbjct: 73  LRGGMQLFVKTLTG-KTITIEMESNDTVENMKQKIFDKEGIPSDQQRLIYAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMI 132
           ++  N+  + T+ ++
Sbjct: 132 INDYNLQKDSTVHLV 146



 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 40/148 (27%), Positives = 86/148 (58%), Gaps = 3/148 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+L+ KT +  +T  L+   +D+IEN+K  ++ +EGI   +  + + GK +E   T++  
Sbjct: 1   MQLFVKTLTG-RTITLEVESNDSIENVKRKVQDKEGISPDQQRLIFAGKQLEDGRTINDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  + TL ++   +   ++FV+T T  T+ +E+    TV ++K+ +   +  IPS+   
Sbjct: 60  NIQKDSTLHLVLRLRGGMQLFVKTLTGKTITIEMESNDTVENMKQKIFD-KEGIPSDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQII 208
           L   G+QL++ +T+  Y+++++  + ++
Sbjct: 119 LIYAGKQLEDGRTINDYNLQKDSTVHLV 146


>gi|123390686|ref|XP_001299928.1| polyubiquitin [Trichomonas vaginalis G3]
 gi|121880877|gb|EAX86998.1| polyubiquitin, putative [Trichomonas vaginalis G3]
          Length = 186

 Score = 78.6 bits (192), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 48/134 (35%), Positives = 74/134 (55%), Gaps = 3/134 (2%)

Query: 150 VKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIR 209
           + LEV     + DVK  ++  +  IP +   L   G+QL++  TL  Y I+++  L ++ 
Sbjct: 46  ITLEVEPTDRIEDVKTKIQD-KEGIPPDQQRLIFAGKQLEDGNTLQDYSIQKDSTLHLVL 104

Query: 210 HVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRN 267
            ++    IFVK L G++I LEV   D + DVK K+  + G  PD QRL+F  +QLED   
Sbjct: 105 RLRGGMQIFVKTLTGKHITLEVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGKQLEDGNT 164

Query: 268 LASYKIVNESIVNL 281
           L  Y I  +S ++L
Sbjct: 165 LQDYSIQKDSTLHL 178



 Score = 70.1 bits (170), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 46/135 (34%), Positives = 77/135 (57%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ T++IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I  +S +H    
Sbjct: 48  LEVEPTDRIEDVKTKIQDK--EGIPPDQQRLIFAGKQLEDGNTLQDYSIQKDSTLHLVLR 105

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  K   L+   +D IE++K  I+ +EGIP  +  + + GK +E   T
Sbjct: 106 LRGGMQIFVKTLTG-KHITLEVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGKQLEDGNT 164

Query: 118 LDVLNINNEDTLQMI 132
           L   +I  + TL ++
Sbjct: 165 LQDYSIQKDSTLHLV 179



 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/144 (28%), Positives = 75/144 (52%), Gaps = 2/144 (1%)

Query: 73  KTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMI 132
           K   L+   +D IE++K  I+ +EGIP  +  + + GK +E   TL   +I  + TL ++
Sbjct: 44  KHITLEVEPTDRIEDVKTKIQDKEGIPPDQQRLIFAGKQLEDGNTLQDYSIQKDSTLHLV 103

Query: 133 SVPKELQEIFVQTPTST-VKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNL 191
              +   +IFV+T T   + LEV     + DVK  ++  +  IP +   L   G+QL++ 
Sbjct: 104 LRLRGGMQIFVKTLTGKHITLEVEPTDRIEDVKAKIQD-KEGIPPDQQRLIFAGKQLEDG 162

Query: 192 KTLAYYDIKENEVLQIIRHVKHSI 215
            TL  Y I+++  L ++  ++  +
Sbjct: 163 NTLQDYSIQKDSTLHLVLRLRGGL 186



 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 29/65 (44%), Positives = 39/65 (60%)

Query: 217 VKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNE 276
           VK L G++I LEV   D + DVK K+  + G  PD QRL+F  +QLED   L  Y I  +
Sbjct: 38  VKTLTGKHITLEVEPTDRIEDVKTKIQDKEGIPPDQQRLIFAGKQLEDGNTLQDYSIQKD 97

Query: 277 SIVNL 281
           S ++L
Sbjct: 98  STLHL 102


>gi|302393788|sp|P23398.2|UBIQP_STRPU RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
           Flags: Precursor
 gi|161616|gb|AAA30082.1| ubiquitin, partial [Strongylocentrotus purpuratus]
          Length = 133

 Score = 78.6 bits (192), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 43/111 (38%), Positives = 67/111 (60%), Gaps = 2/111 (1%)

Query: 173 CIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVA 230
            IP +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV 
Sbjct: 15  GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 74

Query: 231 KFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
             D++ +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 75  PSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 125



 Score = 75.9 bits (185), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 49/129 (37%), Positives = 72/129 (55%), Gaps = 6/129 (4%)

Query: 7   EKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---NDSGVMK 63
           + IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H      G M+
Sbjct: 1   DSIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 58

Query: 64  LYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNI 123
           ++ KT +  KT  L+   SD+IEN+K  I+ +EGIP  +  + + GK +E   TL   NI
Sbjct: 59  IFVKTLTG-KTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 117

Query: 124 NNEDTLQMI 132
             E TL ++
Sbjct: 118 QKESTLHLV 126



 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 42/127 (33%), Positives = 74/127 (58%), Gaps = 2/127 (1%)

Query: 83  DTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEIF 142
           D+IEN+K  I+ +EGIP  +  + + GK +E   TL   NI  E TL ++   +   +IF
Sbjct: 1   DSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIF 60

Query: 143 VQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKE 201
           V+T T  T+ LEV  + ++ +VK  ++  +  IP +   L   G+QL++ +TL+ Y+I++
Sbjct: 61  VKTLTGKTITLEVEPSDSIENVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK 119

Query: 202 NEVLQII 208
              L ++
Sbjct: 120 ESTLHLV 126



 Score = 44.7 bits (104), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 22/49 (44%), Positives = 32/49 (65%)

Query: 233 DTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           D++ +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 1   DSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 49


>gi|334361906|gb|AEG78310.1| ubiquitin, partial [Cucurbita pepo]
          Length = 141

 Score = 78.2 bits (191), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 51/139 (36%), Positives = 81/139 (58%), Gaps = 4/139 (2%)

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 3   NIQRESTLNLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQR 61

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 62  LIFAGKQLEDGRTLADYNIQKETTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 121

Query: 239 KDKLFREIGQAPDSQRLVF 257
           K K+  + G  PD QRL+F
Sbjct: 122 KAKIQDKEGIPPDQQRLIF 140



 Score = 65.5 bits (158), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 36/87 (41%), Positives = 52/87 (59%), Gaps = 2/87 (2%)

Query: 197 YDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQR 254
           Y+I+    L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QR
Sbjct: 2   YNIQRESTLNLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 61

Query: 255 LVFKRQQLEDDRNLASYKIVNESIVNL 281
           L+F  +QLED R LA Y I  E+ ++L
Sbjct: 62  LIFAGKQLEDGRTLADYNIQKETTLHL 88



 Score = 63.5 bits (153), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 46/141 (32%), Positives = 74/141 (52%), Gaps = 5/141 (3%)

Query: 46  DYGIPNNSVIH---NDSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHE 102
           DY I   S ++      G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +
Sbjct: 1   DYNIQRESTLNLVLRLRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQ 59

Query: 103 YDIYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVL 161
             + + GK +E   TL   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ 
Sbjct: 60  QRLIFAGKQLEDGRTLADYNIQKETTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 119

Query: 162 DVKKMVESMRICIPSEDCELF 182
           +VK  ++      P +   +F
Sbjct: 120 NVKAKIQDKEGIPPDQQRLIF 140



 Score = 61.6 bits (148), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 38/111 (34%), Positives = 64/111 (57%), Gaps = 6/111 (5%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   + +H    
Sbjct: 34  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKETTLHLVLR 91

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYG 108
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + 
Sbjct: 92  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 141


>gi|6650740|gb|AAF21992.1| polyubiquitin [Lilium longiflorum]
          Length = 153

 Score = 78.2 bits (191), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 55/145 (37%), Positives = 83/145 (57%), Gaps = 6/145 (4%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + T+ +VK  ++  R  IP +   L   G+QL++ +TLA Y+
Sbjct: 2   QIFVKTLTGKTITLEVESSDTIDNVKAKIQD-REGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I +   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  P + RL+
Sbjct: 61  IHKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIHDKEG-IPPTTRLI 119

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F     ED R LA Y I  ES ++L
Sbjct: 120 FA-GTAEDGRTLADYNIQKESTLHL 143



 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 50/148 (33%), Positives = 83/148 (56%), Gaps = 5/148 (3%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ REGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDREGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI+ E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  +   +  IP     
Sbjct: 60  NIHKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIHD-KEGIPPTTRL 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQII 208
           +F G    ++ +TLA Y+I++   L ++
Sbjct: 119 IFAG--TAEDGRTLADYNIQKESTLHLV 144



 Score = 67.0 bits (162), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 48/135 (35%), Positives = 73/135 (54%), Gaps = 8/135 (5%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  +  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDR--EGIPPDQQRLIFAGKQLEDGRTLADYNIHKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT +  KT  L+   SDTI+N+K  I  +EGIP     I+ G    E   T
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIHDKEGIPPTTRLIFAG--TAEDGRT 129

Query: 118 LDVLNINNEDTLQMI 132
           L   NI  E TL ++
Sbjct: 130 LADYNIQKESTLHLV 144


>gi|403289148|ref|XP_003935728.1| PREDICTED: polyubiquitin-B-like [Saimiri boliviensis boliviensis]
          Length = 165

 Score = 78.2 bits (191), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 44/110 (40%), Positives = 66/110 (60%), Gaps = 2/110 (1%)

Query: 174 IPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAK 231
           IP +   L   G+QL++  TL+ Y+I++   L ++  ++    IFVK L G+ I LEV  
Sbjct: 48  IPPDQQRLIFAGKQLEDGHTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEP 107

Query: 232 FDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
            DT+ +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 108 SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSXYNIQKESTLHL 157



 Score = 75.9 bits (185), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 45/115 (39%), Positives = 65/115 (56%), Gaps = 4/115 (3%)

Query: 21  EEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---NDSGVMKLYFKTPSNEKTFEL 77
           +E I  D   L +AG+QLE+G T+ DY I   S +H      G M+++ KT +  KT  L
Sbjct: 45  KEGIPPDQQRLIFAGKQLEDGHTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG-KTITL 103

Query: 78  KANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMI 132
           +   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   NI  E TL ++
Sbjct: 104 EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSXYNIQKESTLHLV 158



 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 37/118 (31%), Positives = 67/118 (56%), Gaps = 2/118 (1%)

Query: 92  IEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEIFVQTPTS-TV 150
           ++ +EGIP  +  + + GK +E   TL   NI  E TL ++   +   +IFV+T T  T+
Sbjct: 42  VQDKEGIPPDQQRLIFAGKQLEDGHTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTI 101

Query: 151 KLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQII 208
            LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TL+ Y+I++   L ++
Sbjct: 102 TLEVEPSDTIENVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSXYNIQKESTLHLV 158


>gi|6114876|dbj|BAA85750.1| polyubiquitin [Cucumis melo]
          Length = 127

 Score = 77.8 bits (190), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 44/103 (42%), Positives = 64/103 (62%), Gaps = 2/103 (1%)

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 6   LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 65

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 66  KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 108



 Score = 76.6 bits (187), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 47/125 (37%), Positives = 70/125 (56%), Gaps = 4/125 (3%)

Query: 27  DLPELFYAGQQLENGLTVIDYGIPNNSVIH---NDSGVMKLYFKTPSNEKTFELKANRSD 83
           D   L +AG+QLE+G T+ DY I   S +H      G M+++ KT +  KT  L+   SD
Sbjct: 2   DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG-KTITLEVESSD 60

Query: 84  TIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEIFV 143
           TI+N+K  I+ +EGIP  +  + + GK +E   TL   NI  E TL ++   +   +IFV
Sbjct: 61  TIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFV 120

Query: 144 QTPTS 148
           +T T 
Sbjct: 121 KTLTG 125



 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 40/122 (32%), Positives = 68/122 (55%), Gaps = 4/122 (3%)

Query: 105 IYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDV 163
           + + GK +E   TL   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +V
Sbjct: 6   LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 65

Query: 164 KKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLN 221
           K  ++  +  IP +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L 
Sbjct: 66  KAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLT 124

Query: 222 GR 223
           G+
Sbjct: 125 GK 126



 Score = 41.2 bits (95), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 5/71 (7%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 54  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 111

Query: 58  DSGVMKLYFKT 68
             G M+++ KT
Sbjct: 112 LRGGMQIFVKT 122



 Score = 40.8 bits (94), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 18/32 (56%), Positives = 22/32 (68%)

Query: 250 PDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 1   PDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 32


>gi|452113248|gb|AGG08881.1| ubiquitin, partial [Rana clamitans]
          Length = 126

 Score = 77.8 bits (190), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 45/125 (36%), Positives = 74/125 (59%), Gaps = 3/125 (2%)

Query: 157 AHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS-- 214
           + T+ +VK  ++  +  IP +   L   G+QL++ +TL+ Y+I++   L ++  ++    
Sbjct: 3   SDTIENVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 61

Query: 215 IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIV 274
           IFVK L G+ I LEV   DT+ +VK K+  + G  P+ QRL+F  +QLED R L+ Y I 
Sbjct: 62  IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 121

Query: 275 NESIV 279
            ES +
Sbjct: 122 KESTL 126



 Score = 76.3 bits (186), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 50/127 (39%), Positives = 72/127 (56%), Gaps = 6/127 (4%)

Query: 6   TEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---NDSGVM 62
           ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H      G M
Sbjct: 3   SDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 60

Query: 63  KLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLN 122
           +++ KT +  KT  L+   SDTIEN+K  I+ +EGIP ++  + + GK +E   TL   N
Sbjct: 61  QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 119

Query: 123 INNEDTL 129
           I  E TL
Sbjct: 120 IQKESTL 126



 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 45/125 (36%), Positives = 72/125 (57%), Gaps = 2/125 (1%)

Query: 82  SDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEI 141
           SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   NI  E TL ++   +   +I
Sbjct: 3   SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQI 62

Query: 142 FVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIK 200
           FV+T T  T+ LEV  + T+ +VK  ++  +  IP     L   G+QL++ +TL+ Y+I+
Sbjct: 63  FVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 121

Query: 201 ENEVL 205
           +   L
Sbjct: 122 KESTL 126



 Score = 46.6 bits (109), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 23/49 (46%), Positives = 32/49 (65%)

Query: 233 DTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           DT+ +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 4   DTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 52


>gi|2995949|gb|AAC08400.1| ubiquitin, partial [Mesembryanthemum crystallinum]
          Length = 111

 Score = 77.4 bits (189), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 44/103 (42%), Positives = 64/103 (62%), Gaps = 2/103 (1%)

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 1   LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 60

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 61  KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 103



 Score = 70.5 bits (171), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 41/105 (39%), Positives = 61/105 (58%), Gaps = 4/105 (3%)

Query: 31  LFYAGQQLENGLTVIDYGIPNNSVIH---NDSGVMKLYFKTPSNEKTFELKANRSDTIEN 87
           L +AG+QLE+G T+ DY I   S +H      G M+++ KT +  KT  L+   SDTI+N
Sbjct: 1   LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG-KTITLEVESSDTIDN 59

Query: 88  IKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMI 132
           +K  I+ +EGIP  +  + + GK +E   TL   NI  E TL ++
Sbjct: 60  VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 104



 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/109 (31%), Positives = 61/109 (55%), Gaps = 2/109 (1%)

Query: 105 IYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDV 163
           + + GK +E   TL   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +V
Sbjct: 1   LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 60

Query: 164 KKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           K  ++  +  IP +   L   G+QL++ +TLA Y+I++   L ++  ++
Sbjct: 61  KAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 108



 Score = 38.9 bits (89), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 21/56 (37%), Positives = 34/56 (60%), Gaps = 2/56 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH 56
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H
Sbjct: 49  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 102


>gi|284927592|gb|ADC29516.1| polyubiquitin [Citrus sinensis]
 gi|376008204|gb|AFB18313.1| ubiquitin, partial [Citrus maxima]
          Length = 106

 Score = 77.4 bits (189), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 43/100 (43%), Positives = 63/100 (63%), Gaps = 2/100 (2%)

Query: 184 GGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDK 241
            G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K
Sbjct: 2   AGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAK 61

Query: 242 LFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           +  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 62  IQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 101



 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 40/103 (38%), Positives = 60/103 (58%), Gaps = 4/103 (3%)

Query: 33  YAGQQLENGLTVIDYGIPNNSVIH---NDSGVMKLYFKTPSNEKTFELKANRSDTIENIK 89
           +AG+QLE+G T+ DY I   S +H      G M+++ KT +  KT  L+   SDTI+N+K
Sbjct: 1   FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG-KTITLEVESSDTIDNVK 59

Query: 90  FIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMI 132
             I+ +EGIP  +  + + GK +E   TL   NI  E TL ++
Sbjct: 60  AKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 102



 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 34/103 (33%), Positives = 58/103 (56%), Gaps = 2/103 (1%)

Query: 107 YGGKLIESYITLDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKK 165
           + GK +E   TL   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK 
Sbjct: 1   FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 60

Query: 166 MVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQII 208
            ++  +  IP +   L   G+QL++ +TLA Y+I++   L ++
Sbjct: 61  KIQD-KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 102



 Score = 39.3 bits (90), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 21/56 (37%), Positives = 34/56 (60%), Gaps = 2/56 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH 56
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H
Sbjct: 47  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 100


>gi|110288802|gb|ABB47002.2| Protein kinase domain containing protein, expressed [Oryza sativa
           Japonica Group]
 gi|222612580|gb|EEE50712.1| hypothetical protein OsJ_30992 [Oryza sativa Japonica Group]
          Length = 795

 Score = 77.4 bits (189), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 69/253 (27%), Positives = 121/253 (47%), Gaps = 24/253 (9%)

Query: 40  NGLTVIDYGIPNNSVIHNDSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIP 99
           +GL+++     ++ VI      M++Y K PS  KT +L    S+++ ++K  IE +EGI 
Sbjct: 505 SGLSIMKNSSRDDYVIDG----MRIYVKIPSIAKTIKLIVKNSNSVADVKVEIERKEGIL 560

Query: 100 VHEYDIYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEIFVQ-TPTSTVKLEVRRAH 158
                + Y G+ ++    L    ++++  L ++  P E   IFV  +   TV+L+V   +
Sbjct: 561 QDNQMLMYAGRQLDDRQILSHFGLSDDQILHVLICPFEKLRIFVNISNRRTVRLDVESWY 620

Query: 159 TVLDVKKMVESM---RICI-------PSEDCELFRGGEQLQNLKTLAYYDIKENEVLQII 208
           TV DVK M+E++     C        PS D EL        + +TL   ++K N VL  +
Sbjct: 621 TVADVKVMIEALLGFPACTQLLMWTNPSVDIELM-------DTETLKEQNVKNNTVL--L 671

Query: 209 RHVKHSIFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNL 268
            H    IF+K   GR +   V+ FDT  ++  K+ +      +   L ++   L    +L
Sbjct: 672 LHPNVQIFIKSWEGRTLTTLVSMFDTAEEIWKKIKKRSQIKAEKYFLCYRGHVLPPGVSL 731

Query: 269 ASYKIVNESIVNL 281
             YKI + S +++
Sbjct: 732 DMYKIESNSTISI 744



 Score = 38.9 bits (89), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 29/104 (27%), Positives = 51/104 (49%), Gaps = 12/104 (11%)

Query: 3   VKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIHNDSGVM 62
           VK +  +  +K+ I  K  E IL+D   L YAG+QL++   +  +G+ ++ ++H    V+
Sbjct: 540 VKNSNSVADVKVEIERK--EGILQDNQMLMYAGRQLDDRQILSHFGLSDDQILH----VL 593

Query: 63  KLYFK------TPSNEKTFELKANRSDTIENIKFIIEVREGIPV 100
              F+        SN +T  L      T+ ++K +IE   G P 
Sbjct: 594 ICPFEKLRIFVNISNRRTVRLDVESWYTVADVKVMIEALLGFPA 637


>gi|90025323|gb|ABD85126.1| polyubiquitin-like [Chlamydomonas sp. ICE-L]
          Length = 121

 Score = 77.4 bits (189), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 44/110 (40%), Positives = 65/110 (59%), Gaps = 2/110 (1%)

Query: 174 IPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAK 231
           IP +   L   G+QL++  TLA Y+I++   + ++  ++    IFVK L G+ I  EV  
Sbjct: 4   IPPDQQRLIFAGKQLEDGCTLADYNIQKESTMHLVLRLRGGKEIFVKTLTGKTITSEVES 63

Query: 232 FDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
            DT+ +VK K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 64  SDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 113



 Score = 67.8 bits (164), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 42/115 (36%), Positives = 63/115 (54%), Gaps = 4/115 (3%)

Query: 21  EEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---NDSGVMKLYFKTPSNEKTFEL 77
           +E I  D   L +AG+QLE+G T+ DY I   S +H      G  +++ KT +  KT   
Sbjct: 1   KEGIPPDQQRLIFAGKQLEDGCTLADYNIQKESTMHLVLRLRGGKEIFVKTLTG-KTITS 59

Query: 78  KANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMI 132
           +   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   NI  E TL ++
Sbjct: 60  EVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 114



 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/115 (32%), Positives = 65/115 (56%), Gaps = 2/115 (1%)

Query: 95  REGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLE 153
           +EGIP  +  + + GK +E   TL   NI  E T+ ++   +  +EIFV+T T  T+  E
Sbjct: 1   KEGIPPDQQRLIFAGKQLEDGCTLADYNIQKESTMHLVLRLRGGKEIFVKTLTGKTITSE 60

Query: 154 VRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQII 208
           V  + T+ +VK  ++  +  IP +   L   G+QL++ +TLA Y+I++   L ++
Sbjct: 61  VESSDTIDNVKTKIQD-KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 114


>gi|284444065|gb|ADB85771.1| polyubiquitin-like protein [Wolffia arrhiza]
          Length = 114

 Score = 77.0 bits (188), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 44/103 (42%), Positives = 64/103 (62%), Gaps = 2/103 (1%)

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 4   LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 63

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 64  KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 106



 Score = 70.9 bits (172), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 41/105 (39%), Positives = 61/105 (58%), Gaps = 4/105 (3%)

Query: 31  LFYAGQQLENGLTVIDYGIPNNSVIH---NDSGVMKLYFKTPSNEKTFELKANRSDTIEN 87
           L +AG+QLE+G T+ DY I   S +H      G M+++ KT +  KT  L+   SDTI+N
Sbjct: 4   LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG-KTITLEVESSDTIDN 62

Query: 88  IKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMI 132
           +K  I+ +EGIP  +  + + GK +E   TL   NI  E TL ++
Sbjct: 63  VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 107



 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 59/105 (56%), Gaps = 2/105 (1%)

Query: 105 IYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDV 163
           + + GK +E   TL   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +V
Sbjct: 4   LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 63

Query: 164 KKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQII 208
           K  ++  +  IP +   L   G+QL++ +TLA Y+I++   L ++
Sbjct: 64  KAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 107



 Score = 39.3 bits (90), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 21/56 (37%), Positives = 34/56 (60%), Gaps = 2/56 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH 56
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H
Sbjct: 52  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 105


>gi|70780322|gb|AAZ08412.1| polyubiquitin [Populus alba]
          Length = 139

 Score = 77.0 bits (188), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 43/99 (43%), Positives = 62/99 (62%), Gaps = 2/99 (2%)

Query: 185 GEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKL 242
           G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+
Sbjct: 4   GKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKI 63

Query: 243 FREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
             + G  PD QRL+F  +QLED R LA Y I  ES  +L
Sbjct: 64  QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTPHL 102



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 51/140 (36%), Positives = 78/140 (55%), Gaps = 5/140 (3%)

Query: 32  FYAGQQLENGLTVIDYGIPNNSVIH---NDSGVMKLYFKTPSNEKTFELKANRSDTIENI 88
           F  G+QLE+G T+ DY I   S +H      G M+++ KT +  KT  L+   SDTI+N+
Sbjct: 1   FLLGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG-KTITLEVESSDTIDNV 59

Query: 89  KFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEIFVQTPTS 148
           K  I+ +EGIP  +  + + GK +E   TL   NI  E T  ++   +   +IFV+T T 
Sbjct: 60  KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTPHLVLRLRGGMQIFVKTLTG 119

Query: 149 -TVKLEVRRAHTVLDVKKMV 167
            T+ LEV  + T+ +VK  +
Sbjct: 120 KTITLEVESSDTIDNVKAKI 139



 Score = 67.8 bits (164), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 48/137 (35%), Positives = 77/137 (56%), Gaps = 4/137 (2%)

Query: 109 GKLIESYITLDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMV 167
           GK +E   TL   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  +
Sbjct: 4   GKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKI 63

Query: 168 ESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYI 225
           +  +  IP +   L   G+QL++ +TLA Y+I++     ++  ++    IFVK L G+ I
Sbjct: 64  QD-KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTPHLVLRLRGGMQIFVKTLTGKTI 122

Query: 226 ILEVAKFDTVRDVKDKL 242
            LEV   DT+ +VK K+
Sbjct: 123 TLEVESSDTIDNVKAKI 139



 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 34/92 (36%), Positives = 53/92 (57%), Gaps = 6/92 (6%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S  H    
Sbjct: 48  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTPHLVLR 105

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIK 89
             G M+++ KT +  KT  L+   SDTI+N+K
Sbjct: 106 LRGGMQIFVKTLTG-KTITLEVESSDTIDNVK 136


>gi|3158372|gb|AAC39466.1| polyubiquitin [Arabidopsis thaliana]
          Length = 137

 Score = 76.3 bits (186), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 50/136 (36%), Positives = 77/136 (56%), Gaps = 5/136 (3%)

Query: 37  QLENGLTVIDYGIPNNSVIH---NDSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIE 93
           QLE+G T+ DY I   S +H      G M+++ KT +  KT  L+   SDTI+N+K  I+
Sbjct: 1   QLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQ 59

Query: 94  VREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKL 152
            +EGIP  +  + + GK +E   TL   NI  E TL ++   +   +IFV+T T  T+ L
Sbjct: 60  DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTISL 119

Query: 153 EVRRAHTVLDVKKMVE 168
           EV  + T+ +VK  ++
Sbjct: 120 EVESSDTIDNVKAKIQ 135



 Score = 75.1 bits (183), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 42/97 (43%), Positives = 61/97 (62%), Gaps = 2/97 (2%)

Query: 187 QLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFR 244
           QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  
Sbjct: 1   QLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD 60

Query: 245 EIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 61  KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 97



 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 47/134 (35%), Positives = 76/134 (56%), Gaps = 4/134 (2%)

Query: 112 IESYITLDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESM 170
           +E   TL   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  
Sbjct: 2   LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD- 60

Query: 171 RICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILE 228
           +  IP +   L   G+QL++ +TLA Y+I++   L ++  ++    IFVK L G+ I LE
Sbjct: 61  KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTISLE 120

Query: 229 VAKFDTVRDVKDKL 242
           V   DT+ +VK K+
Sbjct: 121 VESSDTIDNVKAKI 134



 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 35/96 (36%), Positives = 56/96 (58%), Gaps = 6/96 (6%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 43  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 100

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIE 93
             G M+++ KT +  KT  L+   SDTI+N+K  I+
Sbjct: 101 LRGGMQIFVKTLTG-KTISLEVESSDTIDNVKAKIQ 135


>gi|5523973|gb|AAD44039.1|AF104022_1 polyprotein [Bovine viral diarrhea virus 2]
          Length = 228

 Score = 76.3 bits (186), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 42/103 (40%), Positives = 64/103 (62%), Gaps = 2/103 (1%)

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 62  LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 121

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 122 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 164



 Score = 70.9 bits (172), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 42/105 (40%), Positives = 61/105 (58%), Gaps = 4/105 (3%)

Query: 31  LFYAGQQLENGLTVIDYGIPNNSVIH---NDSGVMKLYFKTPSNEKTFELKANRSDTIEN 87
           L +AG+QLE+G T+ DY I   S +H      G M+++ KT +  KT  L+   SDTIEN
Sbjct: 62  LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG-KTITLEVEPSDTIEN 120

Query: 88  IKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMI 132
           +K  I+ +EGIP  +  + + GK +E   TL   NI  E TL ++
Sbjct: 121 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 165



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/123 (27%), Positives = 68/123 (55%), Gaps = 2/123 (1%)

Query: 87  NIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEIFVQTP 146
            +K   + ++ + +++  + + GK +E   TL   NI  E TL ++   +   +IFV+T 
Sbjct: 44  TLKLPHQRKKWLQLYQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 103

Query: 147 TS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVL 205
           T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TL+ Y+I++   L
Sbjct: 104 TGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 162

Query: 206 QII 208
            ++
Sbjct: 163 HLV 165



 Score = 38.9 bits (89), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 22/56 (39%), Positives = 34/56 (60%), Gaps = 2/56 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH 56
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H
Sbjct: 110 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 163


>gi|452978051|gb|EME77815.1| hypothetical protein MYCFIDRAFT_63791 [Pseudocercospora fijiensis
           CIRAD86]
          Length = 152

 Score = 75.9 bits (185), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/145 (35%), Positives = 81/145 (55%), Gaps = 5/145 (3%)

Query: 141 IFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDI 199
           I V+T T  T+ L VR +  V  VK  + S +  IP E   L   G QL+N+++LA Y+I
Sbjct: 3   ISVKTLTGKTISLVVRPSDLVSTVKAQIHS-KEEIPPERQRLICSGRQLENIRSLASYNI 61

Query: 200 KENEVLQIIRHV---KHSIFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
             +  L ++  V   K  I+VK L G+ + LE +   TV ++K ++    G  PD  RL+
Sbjct: 62  GRDSTLHLLLGVGNNKMEIYVKTLTGKTLTLETSTHATVDELKLQIQEITGVPPDQMRLI 121

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F  +QLE+ R++A + I  +S V+L
Sbjct: 122 FAGRQLEEGRSMADHGIQQKSTVHL 146



 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/134 (26%), Positives = 71/134 (52%), Gaps = 7/134 (5%)

Query: 3   VKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIHNDSGV- 61
           V+ ++ +  +K +IH+K  EEI  +   L  +G+QLEN  ++  Y I  +S +H   GV 
Sbjct: 17  VRPSDLVSTVKAQIHSK--EEIPPERQRLICSGRQLENIRSLASYNIGRDSTLHLLLGVG 74

Query: 62  ---MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITL 118
              M++Y KT +  KT  L+ +   T++ +K  I+   G+P  +  + + G+ +E   ++
Sbjct: 75  NNKMEIYVKTLTG-KTLTLETSTHATVDELKLQIQEITGVPPDQMRLIFAGRQLEEGRSM 133

Query: 119 DVLNINNEDTLQMI 132
               I  + T+ ++
Sbjct: 134 ADHGIQQKSTVHLV 147


>gi|773585|emb|CAA35578.1| ubiquitin [Tetrahymena pyriformis]
          Length = 116

 Score = 75.9 bits (185), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 41/110 (37%), Positives = 67/110 (60%), Gaps = 2/110 (1%)

Query: 174 IPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAK 231
           IP +   L   G+QL++ +T++ Y+I++   L ++  ++    IFVK L G+ I L+V  
Sbjct: 1   IPPDQQRLIFAGKQLEDGRTVSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVNS 60

Query: 232 FDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
            D + +VK K+  + G  PD QRL+F  +QLED R++A Y I  ES ++L
Sbjct: 61  TDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRSIADYNISKESTLHL 110



 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 42/112 (37%), Positives = 63/112 (56%), Gaps = 4/112 (3%)

Query: 24  ILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---NDSGVMKLYFKTPSNEKTFELKAN 80
           I  D   L +AG+QLE+G TV DY I   S +H      G M+++ KT +  KT  L  N
Sbjct: 1   IPPDQQRLIFAGKQLEDGRTVSDYNIQKESTLHLVLRLRGGMQIFVKTLTG-KTITLDVN 59

Query: 81  RSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMI 132
            +D IEN+K  I+ +EGIP  +  + + GK +E   ++   NI+ E TL ++
Sbjct: 60  STDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRSIADYNISKESTLHLV 111



 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 31/112 (27%), Positives = 59/112 (52%), Gaps = 2/112 (1%)

Query: 98  IPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRR 156
           IP  +  + + GK +E   T+   NI  E TL ++   +   +IFV+T T  T+ L+V  
Sbjct: 1   IPPDQQRLIFAGKQLEDGRTVSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVNS 60

Query: 157 AHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQII 208
              + +VK  ++  +  IP +   L   G+QL++ +++A Y+I +   L ++
Sbjct: 61  TDNIENVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRSIADYNISKESTLHLV 111



 Score = 41.2 bits (95), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 22/56 (39%), Positives = 32/56 (57%), Gaps = 2/56 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH 56
           + V  T+ IE +K +I  K  E I  D   L +AG+QLE+G ++ DY I   S +H
Sbjct: 56  LDVNSTDNIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRSIADYNISKESTLH 109


>gi|29169226|gb|AAO66467.1| polyubiquitin [Camelus dromedarius]
          Length = 108

 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 42/103 (40%), Positives = 64/103 (62%), Gaps = 2/103 (1%)

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 5   LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 64

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 65  KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 107



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 43/109 (39%), Positives = 62/109 (56%), Gaps = 4/109 (3%)

Query: 27  DLPELFYAGQQLENGLTVIDYGIPNNSVIH---NDSGVMKLYFKTPSNEKTFELKANRSD 83
           D   L +AG+QLE+G T+ DY I   S +H      G M+++ KT +  KT  L+   SD
Sbjct: 1   DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG-KTITLEVEPSD 59

Query: 84  TIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMI 132
           TIEN+K  I+ +EGIP  +  + + GK +E   TL   NI  E TL ++
Sbjct: 60  TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 108



 Score = 50.4 bits (119), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 33/105 (31%), Positives = 59/105 (56%), Gaps = 2/105 (1%)

Query: 105 IYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDV 163
           + + GK +E   TL   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +V
Sbjct: 5   LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 64

Query: 164 KKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQII 208
           K  ++  +  IP +   L   G+QL++ +TL+ Y+I++   L ++
Sbjct: 65  KAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 108



 Score = 39.7 bits (91), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 22/56 (39%), Positives = 34/56 (60%), Gaps = 2/56 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH 56
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H
Sbjct: 53  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 106


>gi|62953168|emb|CAG28691.1| polyubiquitin [Fusarium fujikuroi]
          Length = 116

 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 42/103 (40%), Positives = 64/103 (62%), Gaps = 2/103 (1%)

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 6   LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 65

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 66  KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 108



 Score = 71.6 bits (174), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 42/109 (38%), Positives = 62/109 (56%), Gaps = 4/109 (3%)

Query: 27  DLPELFYAGQQLENGLTVIDYGIPNNSVIH---NDSGVMKLYFKTPSNEKTFELKANRSD 83
           D   L +AG+QLE+G T+ DY I   S +H      G M+++ KT +  KT  L+   SD
Sbjct: 2   DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG-KTITLEVESSD 60

Query: 84  TIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMI 132
           TI+N+K  I+ +EGIP  +  + + GK +E   TL   NI  E TL ++
Sbjct: 61  TIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 109



 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 33/105 (31%), Positives = 59/105 (56%), Gaps = 2/105 (1%)

Query: 105 IYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDV 163
           + + GK +E   TL   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +V
Sbjct: 6   LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 65

Query: 164 KKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQII 208
           K  ++  +  IP +   L   G+QL++ +TL+ Y+I++   L ++
Sbjct: 66  KSKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 109



 Score = 38.9 bits (89), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 17/32 (53%), Positives = 22/32 (68%)

Query: 250 PDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 1   PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 32



 Score = 38.5 bits (88), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 21/56 (37%), Positives = 34/56 (60%), Gaps = 2/56 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH 56
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H
Sbjct: 54  LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 107


>gi|60598636|gb|AAX25867.1| unknown [Schistosoma japonicum]
          Length = 183

 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 55/151 (36%), Positives = 80/151 (52%), Gaps = 6/151 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M ++ KT S  KT  L+   SDTIEN+K  I+ +EGIP  ++ +   GK  E   T
Sbjct: 73  LRGGMHIFVKT-STGKTITLEVEPSDTIENVKAKIQDKEGIPPVQHRLISAGKQSEDGRT 131

Query: 118 LDVLNINNEDTLQMISVPKELQEIFVQTPTS 148
                I  E TL ++   +   +IFV T T 
Sbjct: 132 SSDYTIQKESTLHLVLRLRGGMQIFVNTLTG 162



 Score = 74.7 bits (182), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 50/144 (34%), Positives = 81/144 (56%), Gaps = 4/144 (2%)

Query: 141 IFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDI 199
           IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TL+ Y+I
Sbjct: 3   IFVKTLTGNTITLEVEPSDTIENVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYNI 61

Query: 200 KENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVF 257
           ++   L ++  ++    IFVK   G+ I LEV   DT+ +VK K+  + G  P   RL+ 
Sbjct: 62  QKESTLHLVLRLRGGMHIFVKTSTGKTITLEVEPSDTIENVKAKIQDKEGIPPVQHRLIS 121

Query: 258 KRQQLEDDRNLASYKIVNESIVNL 281
             +Q ED R  + Y I  ES ++L
Sbjct: 122 AGKQSEDGRTSSDYTIQKESTLHL 145



 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 53/165 (32%), Positives = 87/165 (52%), Gaps = 5/165 (3%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M ++ KT +   T  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MHIFVKTLTG-NTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +    IFV+T T  T+ LEV  + T+ +VK  ++  +  IP     
Sbjct: 60  NIQKESTLHLVLRLRGGMHIFVKTSTGKTITLEVEPSDTIENVKAKIQD-KEGIPPVQHR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGR 223
           L   G+Q ++ +T + Y I++   L ++  ++    IFV  L G+
Sbjct: 119 LISAGKQSEDGRTSSDYTIQKESTLHLVLRLRGGMQIFVNTLTGK 163


>gi|1353755|gb|AAB01783.1| ubiquitin, partial [Naegleria fowleri]
          Length = 118

 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 42/103 (40%), Positives = 64/103 (62%), Gaps = 2/103 (1%)

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 2   LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESNDTIENV 61

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 62  KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 104



 Score = 74.3 bits (181), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 45/118 (38%), Positives = 68/118 (57%), Gaps = 4/118 (3%)

Query: 31  LFYAGQQLENGLTVIDYGIPNNSVIH---NDSGVMKLYFKTPSNEKTFELKANRSDTIEN 87
           L +AG+QLE+G T+ DY I   S +H      G M+++ KT +  KT  L+   +DTIEN
Sbjct: 2   LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG-KTITLEVESNDTIEN 60

Query: 88  IKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEIFVQT 145
           +K  I+ +EGIP  +  + + GK +E   TL   NI  E TL ++   +   +IFV+T
Sbjct: 61  VKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKT 118



 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/117 (31%), Positives = 64/117 (54%), Gaps = 4/117 (3%)

Query: 105 IYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDV 163
           + + GK +E   TL   NI  E TL ++   +   +IFV+T T  T+ LEV    T+ +V
Sbjct: 2   LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESNDTIENV 61

Query: 164 KKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVK 218
           K  ++  +  IP +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK
Sbjct: 62  KSKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVK 117



 Score = 40.4 bits (93), Expect = 0.86,   Method: Compositional matrix adjust.
 Identities = 26/71 (36%), Positives = 40/71 (56%), Gaps = 5/71 (7%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+  + IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 50  LEVESNDTIENVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 107

Query: 58  DSGVMKLYFKT 68
             G M+++ KT
Sbjct: 108 LRGGMQIFVKT 118


>gi|414588568|tpg|DAA39139.1| TPA: putative ubiquitin family protein isoform 1 [Zea mays]
 gi|414588569|tpg|DAA39140.1| TPA: putative ubiquitin family protein isoform 2 [Zea mays]
          Length = 222

 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 66/228 (28%), Positives = 110/228 (48%), Gaps = 21/228 (9%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ ++PS  K   L+    DT+  +K  I       + +Y + + G  +E  +TL   
Sbjct: 1   MQIFVRSPSG-KMICLRVQPDDTLHTVKKKI-------LEKYHLVFEGVQMEDNLTLADY 52

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS--TVKLEVRRAHTVLDVKKMVESMRICIPSEDC 179
           NI ++ TL +    +E  +I+V+      T+ L+V    T+  +K  +E          C
Sbjct: 53  NIQHQSTLDL----QEKMQIYVKETLKGLTITLDVDSLDTIDIIKDKIEYNEGFPKGRQC 108

Query: 180 ELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS------IFVKLLNGRYIILEVAKFD 233
            +F G EQL+   TLA Y+I     L ++ H   S      IFVK+ NG+   + V   D
Sbjct: 109 LIF-GDEQLEGKYTLADYNICNESTLLLVIHPCTSTSDAMQIFVKMQNGKTTTVRVDSSD 167

Query: 234 TVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           TV  +  K++   G  P  QR++F+ ++LE  R LA Y I  E  ++L
Sbjct: 168 TVNSITVKIYEMEGIPPLEQRIIFRGRRLEGRRTLADYGIQKEETLHL 215



 Score = 67.0 bits (162), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 61/194 (31%), Positives = 95/194 (48%), Gaps = 8/194 (4%)

Query: 20  VEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIHNDSGVMKLYFKTPSNEKTFELKA 79
           V+++ILE    L + G Q+E+ LT+ DY I + S +      M++Y K      T  L  
Sbjct: 26  VKKKILEKY-HLVFEGVQMEDNLTLADYNIQHQSTLDLQEK-MQIYVKETLKGLTITLDV 83

Query: 80  NRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMISVP---- 135
           +  DTI+ IK  IE  EG P     + +G + +E   TL   NI NE TL ++  P    
Sbjct: 84  DSLDTIDIIKDKIEYNEGFPKGRQCLIFGDEQLEGKYTLADYNICNESTLLLVIHPCTST 143

Query: 136 KELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTL 194
            +  +IFV+     T  + V  + TV  +   +  M    P E   +FR G +L+  +TL
Sbjct: 144 SDAMQIFVKMQNGKTTTVRVDSSDTVNSITVKIYEMEGIPPLEQRIIFR-GRRLEGRRTL 202

Query: 195 AYYDIKENEVLQII 208
           A Y I++ E L ++
Sbjct: 203 ADYGIQKEETLHLM 216


>gi|29425820|gb|AAO73559.1| polyubiquitin [Anas platyrhynchos]
 gi|29425822|gb|AAO73560.1| polyubiquitin [Anas platyrhynchos]
          Length = 115

 Score = 75.5 bits (184), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 42/103 (40%), Positives = 64/103 (62%), Gaps = 2/103 (1%)

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDV 238
           L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +V
Sbjct: 3   LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 62

Query: 239 KDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           K K+  + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 63  KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 105



 Score = 71.6 bits (174), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 42/105 (40%), Positives = 61/105 (58%), Gaps = 4/105 (3%)

Query: 31  LFYAGQQLENGLTVIDYGIPNNSVIH---NDSGVMKLYFKTPSNEKTFELKANRSDTIEN 87
           L +AG+QLE+G T+ DY I   S +H      G M+++ KT +  KT  L+   SDTIEN
Sbjct: 3   LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG-KTITLEVEPSDTIEN 61

Query: 88  IKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMI 132
           +K  I+ +EGIP  +  + + GK +E   TL   NI  E TL ++
Sbjct: 62  VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 106



 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 62/112 (55%), Gaps = 2/112 (1%)

Query: 105 IYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDV 163
           + + GK +E   TL   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +V
Sbjct: 3   LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 62

Query: 164 KKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSI 215
           K  ++  +  IP +   L   G+QL++ +TL+ Y+I++   L ++  ++  +
Sbjct: 63  KAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 113



 Score = 39.3 bits (90), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 22/56 (39%), Positives = 34/56 (60%), Gaps = 2/56 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH 56
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H
Sbjct: 51  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 104


>gi|290995512|ref|XP_002680339.1| polyubiquitin [Naegleria gruberi]
 gi|284093959|gb|EFC47595.1| polyubiquitin [Naegleria gruberi]
          Length = 152

 Score = 75.1 bits (183), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 45/145 (31%), Positives = 83/145 (57%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           ++FV+T T  T+ LEV    ++ +VK+        +P +   +F  G+QL++ +T+  Y+
Sbjct: 2   QLFVKTLTGRTITLEVESNDSIENVKRKAHDKEGILPDQQRLIF-AGKQLEDGRTINDYN 60

Query: 199 IKENEVLQIIRHV--KHSIFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I+++  L ++  +     +FVK L G+ I +E+    TV ++K K+F + G   D QRL+
Sbjct: 61  IQKDSTLHLVWRLIGGMQLFVKTLTGKTITIEMESNATVENMKQKIFDKEGIPSDQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           +  +QLED R +  Y +  +S V+L
Sbjct: 121 YAGKQLEDGRTIGDYNLQKDSTVHL 145



 Score = 70.9 bits (172), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 46/135 (34%), Positives = 76/135 (56%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+  + IE +K + H K  E IL D   L +AG+QLE+G T+ DY I  +S +H    
Sbjct: 15  LEVESNDSIENVKRKAHDK--EGILPDQQRLIFAGKQLEDGRTINDYNIQKDSTLHLVWR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+L+ KT +  KT  ++   + T+EN+K  I  +EGIP  +  + Y GK +E   T
Sbjct: 73  LIGGMQLFVKTLTG-KTITIEMESNATVENMKQKIFDKEGIPSDQQRLIYAGKQLEDGRT 131

Query: 118 LDVLNINNEDTLQMI 132
           +   N+  + T+ ++
Sbjct: 132 IGDYNLQKDSTVHLV 146



 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/148 (27%), Positives = 83/148 (56%), Gaps = 3/148 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+L+ KT +  +T  L+   +D+IEN+K     +EGI   +  + + GK +E   T++  
Sbjct: 1   MQLFVKTLTG-RTITLEVESNDSIENVKRKAHDKEGILPDQQRLIFAGKQLEDGRTINDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  + TL ++       ++FV+T T  T+ +E+    TV ++K+ +   +  IPS+   
Sbjct: 60  NIQKDSTLHLVWRLIGGMQLFVKTLTGKTITIEMESNATVENMKQKIFD-KEGIPSDQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQII 208
           L   G+QL++ +T+  Y+++++  + ++
Sbjct: 119 LIYAGKQLEDGRTIGDYNLQKDSTVHLV 146


>gi|157138585|ref|XP_001664265.1| ubiquitin [Aedes aegypti]
 gi|108880553|gb|EAT44778.1| AAEL003888-PA [Aedes aegypti]
          Length = 154

 Score = 75.1 bits (183), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 46/146 (31%), Positives = 85/146 (58%), Gaps = 5/146 (3%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ L+V    T+ ++K  +E  +  IP +   L   G+QL++ + L+ Y+
Sbjct: 2   QIFVKTLTGKTITLDVEAVDTIQNIKGKIED-KEGIPPDQQRLIFAGKQLEDGRALSDYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQ-RL 255
           +++   L ++  ++    IFVK+L GR + ++    D+V  ++ K+  ++ + P +Q RL
Sbjct: 61  VQKGSTLHLVLRLRGGMQIFVKMLTGRTMAIDTEPEDSVETLRVKISEKLEEMPPNQLRL 120

Query: 256 VFKRQQLEDDRNLASYKIVNESIVNL 281
           +F  +QLED R L  Y I+  S V+L
Sbjct: 121 IFAGKQLEDGRTLQEYSIIKGSTVHL 146



 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 44/160 (27%), Positives = 74/160 (46%), Gaps = 14/160 (8%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L     DTI+NIK  IE +EGIP  +  + + GK +E    L   
Sbjct: 1   MQIFVKTLTG-KTITLDVEAVDTIQNIKGKIEDKEGIPPDQQRLIFAGKQLEDGRALSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTSTVKLEVRRAHTVLDVKKMVESMRICI------- 174
           N+    TL ++   +   +IFV+  T       R      + +  VE++R+ I       
Sbjct: 60  NVQKGSTLHLVLRLRGGMQIFVKMLTG------RTMAIDTEPEDSVETLRVKISEKLEEM 113

Query: 175 PSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
           P     L   G+QL++ +TL  Y I +   + ++  +K  
Sbjct: 114 PPNQLRLIFAGKQLEDGRTLQEYSIIKGSTVHLVLRLKGG 153



 Score = 46.6 bits (109), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 36/136 (26%), Positives = 68/136 (50%), Gaps = 7/136 (5%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+  + I+ +K +I  K  E I  D   L +AG+QLE+G  + DY +   S +H    
Sbjct: 15  LDVEAVDTIQNIKGKIEDK--EGIPPDQQRLIFAGKQLEDGRALSDYNVQKGSTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKF-IIEVREGIPVHEYDIYYGGKLIESYI 116
             G M+++ K  +  +T  +     D++E ++  I E  E +P ++  + + GK +E   
Sbjct: 73  LRGGMQIFVKMLTG-RTMAIDTEPEDSVETLRVKISEKLEEMPPNQLRLIFAGKQLEDGR 131

Query: 117 TLDVLNINNEDTLQMI 132
           TL   +I    T+ ++
Sbjct: 132 TLQEYSIIKGSTVHLV 147


>gi|356533093|ref|XP_003535103.1| PREDICTED: LOW QUALITY PROTEIN: polyubiquitin-like [Glycine max]
          Length = 226

 Score = 74.7 bits (182), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 42/99 (42%), Positives = 61/99 (61%), Gaps = 2/99 (2%)

Query: 185 GEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKL 242
           G+QL++ +TL  Y+I+    L ++  ++    IFVK L G+ I LEV   DT+ +VK K+
Sbjct: 120 GKQLEDGRTLVDYNIQNESTLHLVLRLRGGMQIFVKTLIGKTITLEVESCDTIDNVKAKI 179

Query: 243 FREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
             + G  PD  RL+F  +QLED R LA Y I  ESI++L
Sbjct: 180 QDKEGIPPDQXRLIFAGKQLEDGRTLADYDIQKESILHL 218



 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 42/125 (33%), Positives = 67/125 (53%), Gaps = 4/125 (3%)

Query: 10  EKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---NDSGVMKLYF 66
           + + L++   +   IL D   L + G+QLE+G T++DY I N S +H      G M+++ 
Sbjct: 95  DAINLKLLITIFAGILPDQQRLIFVGKQLEDGRTLVDYNIQNESTLHLVLRLRGGMQIFV 154

Query: 67  KTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNE 126
           KT    KT  L+    DTI+N+K  I+ +EGIP  +  + + GK +E   TL   +I  E
Sbjct: 155 KTLIG-KTITLEVESCDTIDNVKAKIQDKEGIPPDQXRLIFAGKQLEDGRTLADYDIQKE 213

Query: 127 DTLQM 131
             L +
Sbjct: 214 SILHL 218



 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/122 (32%), Positives = 67/122 (54%), Gaps = 2/122 (1%)

Query: 87  NIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEIFVQTP 146
           N+K +I +  GI   +  + + GK +E   TL   NI NE TL ++   +   +IFV+T 
Sbjct: 98  NLKLLITIFAGILPDQQRLIFVGKQLEDGRTLVDYNIQNESTLHLVLRLRGGMQIFVKTL 157

Query: 147 TS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVL 205
              T+ LEV    T+ +VK  ++  +  IP +   L   G+QL++ +TLA YDI++  +L
Sbjct: 158 IGKTITLEVESCDTIDNVKAKIQD-KEGIPPDQXRLIFAGKQLEDGRTLADYDIQKESIL 216

Query: 206 QI 207
            +
Sbjct: 217 HL 218


>gi|168036461|ref|XP_001770725.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162677943|gb|EDQ64407.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 153

 Score = 74.3 bits (181), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 45/145 (31%), Positives = 85/145 (58%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + ++ +VK  ++  +  IP +   L   G+QL++ +TLA Y+
Sbjct: 2   QIFVKTLTGKTITLEVESSDSIQNVKTKIQD-KEGIPPDQQRLIFAGKQLEDERTLADYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    I VK L G+ I +++  +DT+  +K+++  + G  P  QRL+
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPYDTIERIKERVEEKEGIPPVQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F  +Q+ DD+    Y I   S+++L
Sbjct: 121 FAGKQMNDDKTARDYNIEGGSVLHL 145



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 79/148 (53%), Gaps = 3/148 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SD+I+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDSIQNVKTKIQDKEGIPPDQQRLIFAGKQLEDERTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTST-VKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +    I V+T T   +++++    T+  +K+ VE  +  IP     
Sbjct: 60  NIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPYDTIERIKERVEE-KEGIPPVQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQII 208
           L   G+Q+ + KT   Y+I+   VL ++
Sbjct: 119 LIFAGKQMNDDKTARDYNIEGGSVLHLV 146



 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 66/135 (48%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+  T+ DY I   S +H    
Sbjct: 15  LEVESSDSIQNVKTKIQDK--EGIPPDQQRLIFAGKQLEDERTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G   +  KT +  K  E+     DTIE IK  +E +EGIP  +  + + GK +    T
Sbjct: 73  LRGGTMIKVKTLTG-KEIEIDIEPYDTIERIKERVEEKEGIPPVQQRLIFAGKQMNDDKT 131

Query: 118 LDVLNINNEDTLQMI 132
               NI     L ++
Sbjct: 132 ARDYNIEGGSVLHLV 146


>gi|159472951|ref|XP_001694608.1| bi-ubiquitin [Chlamydomonas reinhardtii]
 gi|158276832|gb|EDP02603.1| bi-ubiquitin [Chlamydomonas reinhardtii]
 gi|300720946|gb|ADK33602.1| bi-ubiquitin [Chlamydomonas reinhardtii]
          Length = 153

 Score = 74.3 bits (181), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 44/145 (30%), Positives = 85/145 (58%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TLA Y+
Sbjct: 2   QIFVKTLTGKTITLEVESSDTIENVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 199 IKENEVLQIIRHVKHSIFVKL--LNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++  + +K+  L G+ I +++   DT+  +K+++  + G  P  QRL+
Sbjct: 61  IQKESTLHLVLRLRGGMMIKVKTLTGKEIEIDIEPSDTIERIKERVEEKEGIPPVQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F  +Q+ DD+    Y I   S+++L
Sbjct: 121 FAGKQMNDDKQAKDYNIEGGSVLHL 145



 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 82/155 (52%), Gaps = 3/155 (1%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTST-VKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +    I V+T T   +++++  + T+  +K+ VE  +  IP     
Sbjct: 60  NIQKESTLHLVLRLRGGMMIKVKTLTGKEIEIDIEPSDTIERIKERVEE-KEGIPPVQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSI 215
           L   G+Q+ + K    Y+I+   VL ++  ++  +
Sbjct: 119 LIFAGKQMNDDKQAKDYNIEGGSVLHLVLALRGGL 153



 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/113 (37%), Positives = 62/113 (54%), Gaps = 6/113 (5%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGK 110
             G M +  KT +  K  E+    SDTIE IK  +E +EGIP  +  + + GK
Sbjct: 73  LRGGMMIKVKTLTG-KEIEIDIEPSDTIERIKERVEEKEGIPPVQQRLIFAGK 124


>gi|168036269|ref|XP_001770630.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|81230136|dbj|BAE48267.1| putative polyubiquitin [Physcomitrella patens]
 gi|81230138|dbj|BAE48268.1| putative polyubiquitin [Physcomitrella patens]
 gi|162678151|gb|EDQ64613.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 153

 Score = 74.3 bits (181), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 45/145 (31%), Positives = 85/145 (58%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + ++ +VK  ++  +  IP +   L   G+QL++ +TLA Y+
Sbjct: 2   QIFVKTLTGKTITLEVESSDSIQNVKTKIQD-KEGIPPDQQRLIFAGKQLEDERTLADYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    I VK L G+ I +++  +DT+  +K+++  + G  P  QRL+
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPYDTIERIKERVEEKEGIPPVQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F  +Q+ DD+    Y I   S+++L
Sbjct: 121 FAGKQMNDDKTAKDYNIEGGSVLHL 145



 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 79/148 (53%), Gaps = 3/148 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SD+I+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDSIQNVKTKIQDKEGIPPDQQRLIFAGKQLEDERTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTST-VKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +    I V+T T   +++++    T+  +K+ VE  +  IP     
Sbjct: 60  NIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPYDTIERIKERVEE-KEGIPPVQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQII 208
           L   G+Q+ + KT   Y+I+   VL ++
Sbjct: 119 LIFAGKQMNDDKTAKDYNIEGGSVLHLV 146



 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 66/135 (48%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+  T+ DY I   S +H    
Sbjct: 15  LEVESSDSIQNVKTKIQDK--EGIPPDQQRLIFAGKQLEDERTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G   +  KT +  K  E+     DTIE IK  +E +EGIP  +  + + GK +    T
Sbjct: 73  LRGGTMIKVKTLTG-KEIEIDIEPYDTIERIKERVEEKEGIPPVQQRLIFAGKQMNDDKT 131

Query: 118 LDVLNINNEDTLQMI 132
               NI     L ++
Sbjct: 132 AKDYNIEGGSVLHLV 146


>gi|168031292|ref|XP_001768155.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162680593|gb|EDQ67028.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 173

 Score = 74.3 bits (181), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 45/116 (38%), Positives = 68/116 (58%), Gaps = 3/116 (2%)

Query: 153 EVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
           EV  + T+  VK  ++  +  IP +   L   G+QL++ +TLA Y+I++   L ++  ++
Sbjct: 16  EVESSDTIEAVKTKIQD-KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 213 HS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDR 266
               IFVK L G+ I LEV   DT+ DVK K+  + G  PD QRL+F  +QLED R
Sbjct: 75  GGMQIFVKSLRGKTITLEVESSDTIDDVKTKIQDKEGTPPDQQRLIFAGKQLEDGR 130



 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 40/114 (35%), Positives = 64/114 (56%), Gaps = 6/114 (5%)

Query: 3   VKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---NDS 59
           V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H      
Sbjct: 17  VESSDTIEAVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74

Query: 60  GVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIE 113
           G M+++ K+    KT  L+   SDTI+++K  I+ +EG P  +  + + GK +E
Sbjct: 75  GGMQIFVKSLRG-KTITLEVESSDTIDDVKTKIQDKEGTPPDQQRLIFAGKQLE 127



 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 37/110 (33%), Positives = 60/110 (54%), Gaps = 2/110 (1%)

Query: 82  SDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEI 141
           SDTIE +K  I+ +EGIP  +  + + GK +E   TL   NI  E TL ++   +   +I
Sbjct: 20  SDTIEAVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQI 79

Query: 142 FVQT-PTSTVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQN 190
           FV++    T+ LEV  + T+ DVK  ++      P +   +F  G+QL++
Sbjct: 80  FVKSLRGKTITLEVESSDTIDDVKTKIQDKEGTPPDQQRLIF-AGKQLED 128



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/67 (49%), Positives = 41/67 (61%)

Query: 215 IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIV 274
           IFVK L G+   LEV   DT+  VK K+  + G  PD QRL+F  +QLED R LA Y I 
Sbjct: 3   IFVKTLTGKTTTLEVESSDTIEAVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 62

Query: 275 NESIVNL 281
            ES ++L
Sbjct: 63  KESTLHL 69


>gi|61741149|gb|AAX54530.1| polyubiquitin [Fistulifera pelliculosa]
          Length = 120

 Score = 73.9 bits (180), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 40/99 (40%), Positives = 63/99 (63%), Gaps = 2/99 (2%)

Query: 185 GEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKL 242
           G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I L+V   DT+ +VK K+
Sbjct: 3   GKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDNVKTKI 62

Query: 243 FREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
             + G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 63  QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 101



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 45/119 (37%), Positives = 67/119 (56%), Gaps = 4/119 (3%)

Query: 33  YAGQQLENGLTVIDYGIPNNSVIH---NDSGVMKLYFKTPSNEKTFELKANRSDTIENIK 89
           +AG+QLE+G T+ DY I   S +H      G M+++ KT +  KT  L    SDTI+N+K
Sbjct: 1   FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG-KTITLDVEPSDTIDNVK 59

Query: 90  FIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEIFVQTPTS 148
             I+ +EGIP  +  + + GK +E   TL   NI  E TL ++   +   +IFV+T T 
Sbjct: 60  TKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 118



 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 67/120 (55%), Gaps = 4/120 (3%)

Query: 107 YGGKLIESYITLDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKK 165
           + GK +E   TL   NI  E TL ++   +   +IFV+T T  T+ L+V  + T+ +VK 
Sbjct: 1   FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDNVKT 60

Query: 166 MVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGR 223
            ++  +  IP +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+
Sbjct: 61  KIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK 119



 Score = 39.7 bits (91), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 5/71 (7%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 47  LDVEPSDTIDNVKTKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 104

Query: 58  DSGVMKLYFKT 68
             G M+++ KT
Sbjct: 105 LRGGMQIFVKT 115


>gi|301769157|ref|XP_002919997.1| PREDICTED: ubiquitin D-like [Ailuropoda melanoleuca]
          Length = 231

 Score = 73.9 bits (180), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 53/157 (33%), Positives = 88/157 (56%), Gaps = 7/157 (4%)

Query: 132 ISVPKELQ-EIFVQTPT-STVKLEVRRAHTVLDVKKMV---ESMRICIPSEDCELFRGGE 186
           + +PK ++ +IFV+T T  T+ LE+  ++T  +VK  +   E + +C   +    F G +
Sbjct: 67  LHLPKRVKMQIFVKTLTVKTIALEMEPSYTTKNVKAKIQDREGITVCHTQQKRLTFAGKQ 126

Query: 187 QLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFR 244
                 TL+ ++I+E   L  + H++    IFVK L  + I LEV   +T+R+VK K+  
Sbjct: 127 LEDGCHTLSDFNIREGSTLHRVLHLRGGMQIFVKTLISKTISLEVEPSNTIRNVKAKIQD 186

Query: 245 EIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           + G  PD QRL+F  +QLED  +L+ Y I   S ++L
Sbjct: 187 KEGIPPDQQRLIFVGKQLEDGISLSDYIIQKGSTLHL 223



 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 56/190 (29%), Positives = 97/190 (51%), Gaps = 13/190 (6%)

Query: 29  PELFYAGQQLENGLTVIDYGIPNNSVIHNDSGV-MKLYFKTPSNEKTFELKANRSDTIEN 87
           P   + G+   NG    + G   +S +H    V M+++ KT +  KT  L+   S T +N
Sbjct: 46  PRFIFCGK---NGWG--NLGELKDSSLHLPKRVKMQIFVKTLT-VKTIALEMEPSYTTKN 99

Query: 88  IKFIIEVREGIPV---HEYDIYYGGKLIESYI-TLDVLNINNEDTLQMISVPKELQEIFV 143
           +K  I+ REGI V    +  + + GK +E    TL   NI    TL  +   +   +IFV
Sbjct: 100 VKAKIQDREGITVCHTQQKRLTFAGKQLEDGCHTLSDFNIREGSTLHRVLHLRGGMQIFV 159

Query: 144 QTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKEN 202
           +T  S T+ LEV  ++T+ +VK  ++  +  IP +   L   G+QL++  +L+ Y I++ 
Sbjct: 160 KTLISKTISLEVEPSNTIRNVKAKIQD-KEGIPPDQQRLIFVGKQLEDGISLSDYIIQKG 218

Query: 203 EVLQIIRHVK 212
             L ++ H++
Sbjct: 219 STLHLVLHLR 228


>gi|115438809|ref|NP_001043684.1| Os01g0641200 [Oryza sativa Japonica Group]
 gi|302393767|sp|P0C032.2|RUB3_ORYSJ RecName: Full=Ubiquitin-like protein-NEDD8-like protein RUB3;
           Contains: RecName: Full=Ubiquitin-like protein;
           Contains: RecName: Full=NEDD8-like protein RUB3;
           AltName: Full=OsRUB3; AltName: Full=Ubiquitin-related
           protein 3; Flags: Precursor
 gi|20161535|dbj|BAB90457.1| putative polyubiquitin 2 [Oryza sativa Japonica Group]
 gi|20805124|dbj|BAB92795.1| putative polyubiquitin 2 [Oryza sativa Japonica Group]
 gi|113533215|dbj|BAF05598.1| Os01g0641200 [Oryza sativa Japonica Group]
 gi|125527016|gb|EAY75130.1| hypothetical protein OsI_03024 [Oryza sativa Indica Group]
 gi|125571348|gb|EAZ12863.1| hypothetical protein OsJ_02783 [Oryza sativa Japonica Group]
          Length = 154

 Score = 73.9 bits (180), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 48/145 (33%), Positives = 85/145 (58%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + T+ +VK  V+  +  IP +   L   G+QL++ +TLA Y+
Sbjct: 2   QIFVKTLTGKTITLEVESSDTIQNVKAKVQD-KEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 199 IKENEVLQIIRHVKHSIFVKL--LNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++  + VK+  L G+ I +++   DTV  +K+++    G  P  QRL+
Sbjct: 61  IQKESTLHLVLRLRGGLNVKVRTLTGKEIDIDIEMTDTVDRIKERVEEREGIPPVQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           +  +QL DD+    YKI   S+++L
Sbjct: 121 YGGKQLADDKTAHDYKIEAGSVLHL 145



 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 81/156 (51%), Gaps = 3/156 (1%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  ++ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIQNVKAKVQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTST-VKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +    + V+T T   + +++    TV  +K+ VE  R  IP     
Sbjct: 60  NIQKESTLHLVLRLRGGLNVKVRTLTGKEIDIDIEMTDTVDRIKERVEE-REGIPPVQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSIF 216
           L  GG+QL + KT   Y I+   VL ++  ++   F
Sbjct: 119 LIYGGKQLADDKTAHDYKIEAGSVLHLVLALRGGNF 154



 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 63/113 (55%), Gaps = 6/113 (5%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K ++  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIQNVKAKVQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGK 110
             G + +  +T +  K  ++    +DT++ IK  +E REGIP  +  + YGGK
Sbjct: 73  LRGGLNVKVRTLTG-KEIDIDIEMTDTVDRIKERVEEREGIPPVQQRLIYGGK 124


>gi|21314339|gb|AAM46896.1|AF506020_1 polyubiquitin [Tribolium castaneum]
          Length = 112

 Score = 73.6 bits (179), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 41/105 (39%), Positives = 62/105 (59%), Gaps = 2/105 (1%)

Query: 174 IPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAK 231
           IP +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV  
Sbjct: 8   IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEP 67

Query: 232 FDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNE 276
            DT+ +VK K+  + G  PD QR +F  +QLED R L+ Y I  E
Sbjct: 68  SDTIENVKAKIQDKEGIPPDQQRSIFAGKQLEDGRTLSDYNIQKE 112



 Score = 67.4 bits (163), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 43/109 (39%), Positives = 60/109 (55%), Gaps = 4/109 (3%)

Query: 21  EEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---NDSGVMKLYFKTPSNEKTFEL 77
           +E I  D   L +AG+QLE+G T+ DY I   S +H      G M+++ KT +  KT  L
Sbjct: 5   KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG-KTITL 63

Query: 78  KANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNE 126
           +   SDTIEN+K  I+ +EGIP  +    + GK +E   TL   NI  E
Sbjct: 64  EVEPSDTIENVKAKIQDKEGIPPDQQRSIFAGKQLEDGRTLSDYNIQKE 112



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/111 (32%), Positives = 63/111 (56%), Gaps = 2/111 (1%)

Query: 92  IEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEIFVQTPTS-TV 150
           I+ +EGIP  +  + + GK +E   TL   NI  E TL ++   +   +IFV+T T  T+
Sbjct: 2   IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTI 61

Query: 151 KLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKE 201
            LEV  + T+ +VK  ++      P +   +F  G+QL++ +TL+ Y+I++
Sbjct: 62  TLEVEPSDTIENVKAKIQDKEGIPPDQQRSIF-AGKQLEDGRTLSDYNIQK 111



 Score = 39.7 bits (91), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 18/35 (51%), Positives = 23/35 (65%)

Query: 247 GQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 7   GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 41


>gi|296205125|ref|XP_002749733.1| PREDICTED: polyubiquitin-C-like [Callithrix jacchus]
          Length = 177

 Score = 73.6 bits (179), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 39/96 (40%), Positives = 59/96 (61%), Gaps = 2/96 (2%)

Query: 188 LQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFRE 245
           L++  TL+ Y+I++   L ++ H++    IFVK L G+ I  EV   DT+ +VK K+  +
Sbjct: 74  LEDGCTLSDYNIQKESTLHLVLHLRGGMQIFVKTLTGKTITFEVEPSDTIENVKAKIQDK 133

Query: 246 IGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
            G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 134 EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 169



 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/98 (37%), Positives = 55/98 (56%), Gaps = 4/98 (4%)

Query: 38  LENGLTVIDYGIPNNSVIH---NDSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEV 94
           LE+G T+ DY I   S +H   +  G M+++ KT +  KT   +   SDTIEN+K  I+ 
Sbjct: 74  LEDGCTLSDYNIQKESTLHLVLHLRGGMQIFVKTLTG-KTITFEVEPSDTIENVKAKIQD 132

Query: 95  REGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMI 132
           +EGIP  +  + + GK +E   TL   NI  E TL ++
Sbjct: 133 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 170



 Score = 45.1 bits (105), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 38/160 (23%), Positives = 74/160 (46%), Gaps = 22/160 (13%)

Query: 59  SGVMKLYFKTPSNEKTF--ELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYI 116
           SG   L    P +E ++   + +  +  I N  +II + +G  + +Y             
Sbjct: 37  SGSTLLPPGPPCSEVSWLWGVASAMAGCISNGSYIIGLEDGCTLSDY------------- 83

Query: 117 TLDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIP 175
                NI  E TL ++   +   +IFV+T T  T+  EV  + T+ +VK  ++  +  IP
Sbjct: 84  -----NIQKESTLHLVLHLRGGMQIFVKTLTGKTITFEVEPSDTIENVKAKIQD-KEGIP 137

Query: 176 SEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSI 215
            +   L   G+QL++ +TL+ Y+I++   L ++  +   +
Sbjct: 138 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLSGGV 177



 Score = 38.5 bits (88), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 22/55 (40%), Positives = 33/55 (60%), Gaps = 2/55 (3%)

Query: 2   KVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH 56
           +V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H
Sbjct: 116 EVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 168


>gi|170034791|ref|XP_001845256.1| ubiquitin [Culex quinquefasciatus]
 gi|167876386|gb|EDS39769.1| ubiquitin [Culex quinquefasciatus]
          Length = 154

 Score = 73.6 bits (179), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 44/146 (30%), Positives = 85/146 (58%), Gaps = 5/146 (3%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ L+V    T+ ++K  +E  +  IP +   L   G+QL++ + L+ Y+
Sbjct: 2   QIFVKTLTGKTITLDVEPVDTIQNIKGKIED-KEGIPPDQQRLIFAGKQLEDGRALSDYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQ-RL 255
           +++   L ++  ++    IFVK+L GR   +++ + DTV  +K ++   + + P +Q RL
Sbjct: 61  VQKGSTLHLVLRLRGGFQIFVKMLTGRCFTVDIEQEDTVDTLKQRVSERLEEMPANQCRL 120

Query: 256 VFKRQQLEDDRNLASYKIVNESIVNL 281
           +F  +QLED R +  Y ++  S ++L
Sbjct: 121 IFAGKQLEDGRTVGEYSVIKGSTLHL 146



 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/154 (27%), Positives = 77/154 (50%), Gaps = 2/154 (1%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L     DTI+NIK  IE +EGIP  +  + + GK +E    L   
Sbjct: 1   MQIFVKTLTG-KTITLDVEPVDTIQNIKGKIEDKEGIPPDQQRLIFAGKQLEDGRALSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           N+    TL ++   +   +IFV+  T     +++ +  TV  +K+ V      +P+  C 
Sbjct: 60  NVQKGSTLHLVLRLRGGFQIFVKMLTGRCFTVDIEQEDTVDTLKQRVSERLEEMPANQCR 119

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
           L   G+QL++ +T+  Y + +   L ++  +K  
Sbjct: 120 LIFAGKQLEDGRTVGEYSVIKGSTLHLVLRLKGG 153



 Score = 46.2 bits (108), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 34/136 (25%), Positives = 68/136 (50%), Gaps = 7/136 (5%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+  + I+ +K +I  K  E I  D   L +AG+QLE+G  + DY +   S +H    
Sbjct: 15  LDVEPVDTIQNIKGKIEDK--EGIPPDQQRLIFAGKQLEDGRALSDYNVQKGSTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVR-EGIPVHEYDIYYGGKLIESYI 116
             G  +++ K  +  + F +   + DT++ +K  +  R E +P ++  + + GK +E   
Sbjct: 73  LRGGFQIFVKMLTG-RCFTVDIEQEDTVDTLKQRVSERLEEMPANQCRLIFAGKQLEDGR 131

Query: 117 TLDVLNINNEDTLQMI 132
           T+   ++    TL ++
Sbjct: 132 TVGEYSVIKGSTLHLV 147


>gi|302393764|sp|P0C073.2|RUB1_DESAN RecName: Full=Ubiquitin-NEDD8-like protein RUB1; Contains: RecName:
           Full=Ubiquitin; Contains: RecName: Full=NEDD8-like
           protein RUB1; AltName: Full=DaRUB1; AltName:
           Full=Ubiquitin-related protein 1; Flags: Precursor
 gi|20562909|gb|AAM22748.1| polyubiquitin 2 [Deschampsia antarctica]
          Length = 153

 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 47/145 (32%), Positives = 84/145 (57%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TLA Y+
Sbjct: 2   QIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    I VK L G+ I +++   DT+  VK+++  + G  P  QRL+
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRVKERVEEKEGIPPVQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           +  +QL DD+    Y I   S+++L
Sbjct: 121 YAGKQLADDKTAKDYNIEGGSVLHL 145



 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/148 (32%), Positives = 79/148 (53%), Gaps = 3/148 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTST-VKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +    I V+T T   +++++    T+  VK+ VE  +  IP     
Sbjct: 60  NIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRVKERVEE-KEGIPPVQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQII 208
           L   G+QL + KT   Y+I+   VL ++
Sbjct: 119 LIYAGKQLADDKTAKDYNIEGGSVLHLV 146



 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 68/135 (50%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G   +  KT +  K  E+    +DTI+ +K  +E +EGIP  +  + Y GK +    T
Sbjct: 73  LRGGTMIKVKTLTG-KEIEIDIEPTDTIDRVKERVEEKEGIPPVQQRLIYAGKQLADDKT 131

Query: 118 LDVLNINNEDTLQMI 132
               NI     L ++
Sbjct: 132 AKDYNIEGGSVLHLV 146


>gi|403284848|ref|XP_003933764.1| PREDICTED: ubiquitin-60S ribosomal protein L40-like isoform 4
           [Saimiri boliviensis boliviensis]
          Length = 121

 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 43/110 (39%), Positives = 65/110 (59%), Gaps = 2/110 (1%)

Query: 174 IPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAK 231
           IP +   L    +QL++ + L+ Y+I++   L +I  ++    IFVK L  + I LEV  
Sbjct: 4   IPPDQQRLIFARKQLEDGRNLSDYNIQKESTLHLILRLRGGMQIFVKTLTSKTITLEVEP 63

Query: 232 FDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
            DT+ +VK K+  + G  PD QRL+F  +QLED R L+ Y I  ESI++L
Sbjct: 64  SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESILHL 113



 Score = 65.5 bits (158), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 42/114 (36%), Positives = 62/114 (54%), Gaps = 4/114 (3%)

Query: 22  EEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---NDSGVMKLYFKTPSNEKTFELK 78
           E I  D   L +A +QLE+G  + DY I   S +H      G M+++ KT ++ KT  L+
Sbjct: 2   EGIPPDQQRLIFARKQLEDGRNLSDYNIQKESTLHLILRLRGGMQIFVKTLTS-KTITLE 60

Query: 79  ANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMI 132
              SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   NI  E  L ++
Sbjct: 61  VEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESILHLV 114



 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/121 (30%), Positives = 67/121 (55%), Gaps = 2/121 (1%)

Query: 96  EGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEV 154
           EGIP  +  + +  K +E    L   NI  E TL +I   +   +IFV+T TS T+ LEV
Sbjct: 2   EGIPPDQQRLIFARKQLEDGRNLSDYNIQKESTLHLILRLRGGMQIFVKTLTSKTITLEV 61

Query: 155 RRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
             + T+ +VK  ++  +  IP +   L   G+QL++ +TL+ Y+I++  +L ++  ++  
Sbjct: 62  EPSDTIENVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESILHLVLRLRGD 120

Query: 215 I 215
           +
Sbjct: 121 V 121



 Score = 44.7 bits (104), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 20/35 (57%), Positives = 25/35 (71%)

Query: 247 GQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           G  PD QRL+F R+QLED RNL+ Y I  ES ++L
Sbjct: 3   GIPPDQQRLIFARKQLEDGRNLSDYNIQKESTLHL 37



 Score = 40.4 bits (93), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 22/56 (39%), Positives = 35/56 (62%), Gaps = 2/56 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH 56
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S++H
Sbjct: 59  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESILH 112


>gi|115479211|ref|NP_001063199.1| Os09g0420800 [Oryza sativa Japonica Group]
 gi|242044708|ref|XP_002460225.1| hypothetical protein SORBIDRAFT_02g024880 [Sorghum bicolor]
 gi|357158453|ref|XP_003578133.1| PREDICTED: ubiquitin-NEDD8-like protein RUB1-like [Brachypodium
           distachyon]
 gi|302393765|sp|P0C030.2|RUB1_ORYSJ RecName: Full=Ubiquitin-NEDD8-like protein RUB1; Contains: RecName:
           Full=Ubiquitin; Contains: RecName: Full=NEDD8-like
           protein RUB1; AltName: Full=OsRUB1; AltName:
           Full=Ubiquitin-related protein 1; Flags: Precursor
 gi|50725971|dbj|BAD33498.1| polyubiquitin 2 [Oryza sativa Japonica Group]
 gi|50726105|dbj|BAD33626.1| polyubiquitin 2 [Oryza sativa Japonica Group]
 gi|113631432|dbj|BAF25113.1| Os09g0420800 [Oryza sativa Japonica Group]
 gi|125563747|gb|EAZ09127.1| hypothetical protein OsI_31396 [Oryza sativa Indica Group]
 gi|215704536|dbj|BAG94169.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|241923602|gb|EER96746.1| hypothetical protein SORBIDRAFT_02g024880 [Sorghum bicolor]
 gi|326513616|dbj|BAJ87827.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 153

 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 46/145 (31%), Positives = 84/145 (57%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TLA Y+
Sbjct: 2   QIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    I VK L G+ I +++   DT+  +K+++  + G  P  QRL+
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           +  +QL DD+    Y I   S+++L
Sbjct: 121 YAGKQLADDKTAKDYNIEGGSVLHL 145



 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 79/148 (53%), Gaps = 3/148 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTST-VKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +    I V+T T   +++++    T+  +K+ VE  +  IP     
Sbjct: 60  NIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEE-KEGIPPVQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQII 208
           L   G+QL + KT   Y+I+   VL ++
Sbjct: 119 LIYAGKQLADDKTAKDYNIEGGSVLHLV 146



 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 43/135 (31%), Positives = 68/135 (50%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G   +  KT +  K  E+    +DTI+ IK  +E +EGIP  +  + Y GK +    T
Sbjct: 73  LRGGTMIKVKTLTG-KEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKT 131

Query: 118 LDVLNINNEDTLQMI 132
               NI     L ++
Sbjct: 132 AKDYNIEGGSVLHLV 146


>gi|357494497|ref|XP_003617537.1| Bi-ubiquitin [Medicago truncatula]
 gi|355518872|gb|AET00496.1| Bi-ubiquitin [Medicago truncatula]
 gi|388497058|gb|AFK36595.1| unknown [Medicago truncatula]
          Length = 153

 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 46/145 (31%), Positives = 84/145 (57%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TLA Y+
Sbjct: 2   QIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    I VK L G+ I +++   DT+  +K+++  + G  P  QRL+
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           +  +QL DD+    Y I   S+++L
Sbjct: 121 YAGKQLADDKTAKEYNIEGGSVLHL 145



 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 79/148 (53%), Gaps = 3/148 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTST-VKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +    I V+T T   +++++    T+  +K+ VE  +  IP     
Sbjct: 60  NIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEE-KEGIPPVQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQII 208
           L   G+QL + KT   Y+I+   VL ++
Sbjct: 119 LIYAGKQLADDKTAKEYNIEGGSVLHLV 146



 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 43/135 (31%), Positives = 68/135 (50%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G   +  KT +  K  E+    +DTI+ IK  +E +EGIP  +  + Y GK +    T
Sbjct: 73  LRGGTMIKVKTLTG-KEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKT 131

Query: 118 LDVLNINNEDTLQMI 132
               NI     L ++
Sbjct: 132 AKEYNIEGGSVLHLV 146


>gi|297823361|ref|XP_002879563.1| hypothetical protein ARALYDRAFT_482524 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297325402|gb|EFH55822.1| hypothetical protein ARALYDRAFT_482524 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 152

 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 46/145 (31%), Positives = 84/145 (57%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TLA Y+
Sbjct: 2   QIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    I VK L G+ I +++   DT+  +K+++  + G  P  QRL+
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           +  +QL DD+    Y I   S+++L
Sbjct: 121 YAGKQLADDKTAKDYAIEGGSVLHL 145



 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 78/148 (52%), Gaps = 3/148 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTST-VKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +    I V+T T   +++++    T+  +K+ VE  +  IP     
Sbjct: 60  NIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEE-KEGIPPVQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQII 208
           L   G+QL + KT   Y I+   VL ++
Sbjct: 119 LIYAGKQLADDKTAKDYAIEGGSVLHLV 146



 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/113 (34%), Positives = 61/113 (53%), Gaps = 6/113 (5%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGK 110
             G   +  KT +  K  E+    +DTI+ IK  +E +EGIP  +  + Y GK
Sbjct: 73  LRGGTMIKVKTLTG-KEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGK 124


>gi|297846540|ref|XP_002891151.1| hypothetical protein ARALYDRAFT_473638 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297336993|gb|EFH67410.1| hypothetical protein ARALYDRAFT_473638 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 156

 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 46/145 (31%), Positives = 84/145 (57%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TLA Y+
Sbjct: 2   QIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    I VK L G+ I +++   DT+  +K+++  + G  P  QRL+
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           +  +QL DD+    Y I   S+++L
Sbjct: 121 YAGKQLADDKTAKDYAIEGGSVLHL 145



 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 78/148 (52%), Gaps = 3/148 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTST-VKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +    I V+T T   +++++    T+  +K+ VE  +  IP     
Sbjct: 60  NIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEE-KEGIPPVQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQII 208
           L   G+QL + KT   Y I+   VL ++
Sbjct: 119 LIYAGKQLADDKTAKDYAIEGGSVLHLV 146



 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 40/115 (34%), Positives = 62/115 (53%), Gaps = 10/115 (8%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIHNDSG 60
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL--- 69

Query: 61  VMKLYFKTPSNEKTF-----ELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGK 110
           V++L   T    KT      E+    +DTI+ IK  +E +EGIP  +  + Y GK
Sbjct: 70  VLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGK 124


>gi|242093754|ref|XP_002437367.1| hypothetical protein SORBIDRAFT_10g025670 [Sorghum bicolor]
 gi|357123249|ref|XP_003563324.1| PREDICTED: ubiquitin-NEDD8-like protein RUB2-like [Brachypodium
           distachyon]
 gi|302393766|sp|P0C031.2|RUB2_ORYSJ RecName: Full=Ubiquitin-NEDD8-like protein RUB2; Contains: RecName:
           Full=Ubiquitin; Contains: RecName: Full=NEDD8-like
           protein RUB2; AltName: Full=OsRUB2; AltName:
           Full=Ubiquitin-related protein 2; Flags: Precursor
 gi|51534981|dbj|BAD38105.1| polyubiquitin 2 [Oryza sativa Japonica Group]
 gi|215692861|dbj|BAG88281.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|218186299|gb|EEC68726.1| hypothetical protein OsI_37226 [Oryza sativa Indica Group]
 gi|218198663|gb|EEC81090.1| hypothetical protein OsI_23921 [Oryza sativa Indica Group]
 gi|241915590|gb|EER88734.1| hypothetical protein SORBIDRAFT_10g025670 [Sorghum bicolor]
          Length = 153

 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 46/145 (31%), Positives = 84/145 (57%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TLA Y+
Sbjct: 2   QIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    I VK L G+ I +++   DT+  +K+++  + G  P  QRL+
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           +  +QL DD+    Y I   S+++L
Sbjct: 121 YAGKQLADDKTAKDYNIEGGSVLHL 145



 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 79/148 (53%), Gaps = 3/148 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTST-VKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +    I V+T T   +++++    T+  +K+ VE  +  IP     
Sbjct: 60  NIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEE-KEGIPPVQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQII 208
           L   G+QL + KT   Y+I+   VL ++
Sbjct: 119 LIYAGKQLADDKTAKDYNIEGGSVLHLV 146



 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 43/135 (31%), Positives = 68/135 (50%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G   +  KT +  K  E+    +DTI+ IK  +E +EGIP  +  + Y GK +    T
Sbjct: 73  LRGGTMIKVKTLTG-KEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKT 131

Query: 118 LDVLNINNEDTLQMI 132
               NI     L ++
Sbjct: 132 AKDYNIEGGSVLHLV 146


>gi|18403909|ref|NP_565812.1| NEDD8-like protein RUB2 [Arabidopsis thaliana]
 gi|302393809|sp|Q8RUC6.3|RUB2_ARATH RecName: Full=Ubiquitin-NEDD8-like protein RUB2; Contains: RecName:
           Full=Ubiquitin; Contains: RecName: Full=NEDD8-like
           protein RUB2; AltName: Full=Ubiquitin-related protein 2;
           Short=AtRUB2; Flags: Precursor
 gi|18650605|gb|AAL75902.1| At1g31340/T19E23_4 [Arabidopsis thaliana]
 gi|20147417|gb|AAM10418.1| At1g31340/T19E23_4 [Arabidopsis thaliana]
 gi|20197530|gb|AAM15116.1| ubiquitin-like UBQ7/AtRUB2, putative [Arabidopsis thaliana]
 gi|26452375|dbj|BAC43273.1| ubiquitin-like protein [Arabidopsis thaliana]
 gi|330254040|gb|AEC09134.1| NEDD8-like protein RUB2 [Arabidopsis thaliana]
          Length = 154

 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 46/145 (31%), Positives = 84/145 (57%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TLA Y+
Sbjct: 2   QIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    I VK L G+ I +++   DT+  +K+++  + G  P  QRL+
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           +  +QL DD+    Y I   S+++L
Sbjct: 121 YAGKQLADDKTAKDYAIEGGSVLHL 145



 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/156 (30%), Positives = 81/156 (51%), Gaps = 3/156 (1%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTST-VKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +    I V+T T   +++++    T+  +K+ VE  +  IP     
Sbjct: 60  NIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEE-KEGIPPVQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSIF 216
           L   G+QL + KT   Y I+   VL ++  ++  + 
Sbjct: 119 LIYAGKQLADDKTAKDYAIEGGSVLHLVLALRGGLL 154



 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 40/115 (34%), Positives = 62/115 (53%), Gaps = 10/115 (8%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIHNDSG 60
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL--- 69

Query: 61  VMKLYFKTPSNEKTF-----ELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGK 110
           V++L   T    KT      E+    +DTI+ IK  +E +EGIP  +  + Y GK
Sbjct: 70  VLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGK 124


>gi|356525758|ref|XP_003531490.1| PREDICTED: ubiquitin-NEDD8-like protein RUB2-like [Glycine max]
 gi|356556999|ref|XP_003546806.1| PREDICTED: ubiquitin-NEDD8-like protein RUB2-like [Glycine max]
 gi|255627501|gb|ACU14095.1| unknown [Glycine max]
          Length = 154

 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 46/145 (31%), Positives = 84/145 (57%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TLA Y+
Sbjct: 2   QIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    I VK L G+ I +++   DT+  +K+++  + G  P  QRL+
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           +  +QL DD+    Y I   S+++L
Sbjct: 121 YAGKQLADDKTAKEYNIEGGSVLHL 145



 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 47/156 (30%), Positives = 82/156 (52%), Gaps = 3/156 (1%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTST-VKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +    I V+T T   +++++    T+  +K+ VE  +  IP     
Sbjct: 60  NIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEE-KEGIPPVQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSIF 216
           L   G+QL + KT   Y+I+   VL ++  ++   +
Sbjct: 119 LIYAGKQLADDKTAKEYNIEGGSVLHLVLALRGGTY 154



 Score = 57.0 bits (136), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 43/135 (31%), Positives = 68/135 (50%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G   +  KT +  K  E+    +DTI+ IK  +E +EGIP  +  + Y GK +    T
Sbjct: 73  LRGGTMIKVKTLTG-KEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKT 131

Query: 118 LDVLNINNEDTLQMI 132
               NI     L ++
Sbjct: 132 AKEYNIEGGSVLHLV 146


>gi|30692436|ref|NP_564379.2| NEDD8-like protein RUB1 [Arabidopsis thaliana]
 gi|302393813|sp|Q9SHE7.3|RUB1_ARATH RecName: Full=Ubiquitin-NEDD8-like protein RUB1; Contains: RecName:
           Full=Ubiquitin; Contains: RecName: Full=NEDD8-like
           protein RUB1; AltName: Full=Ubiquitin-related protein 1;
           Short=AtRUB1; Flags: Precursor
 gi|6692129|gb|AAF24594.1|AC007654_10 T19E23.13 [Arabidopsis thaliana]
 gi|28973676|gb|AAO64156.1| putative ubiquitin (AtRUB1) [Arabidopsis thaliana]
 gi|29824269|gb|AAP04095.1| putative ubiquitin (AtRUB1) [Arabidopsis thaliana]
 gi|110737109|dbj|BAF00506.1| putative ubiquitin [Arabidopsis thaliana]
 gi|312283039|dbj|BAJ34385.1| unnamed protein product [Thellungiella halophila]
 gi|332193223|gb|AEE31344.1| NEDD8-like protein RUB1 [Arabidopsis thaliana]
          Length = 156

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 46/145 (31%), Positives = 84/145 (57%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TLA Y+
Sbjct: 2   QIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    I VK L G+ I +++   DT+  +K+++  + G  P  QRL+
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           +  +QL DD+    Y I   S+++L
Sbjct: 121 YAGKQLADDKTAKDYNIEGGSVLHL 145



 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 79/148 (53%), Gaps = 3/148 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTST-VKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +    I V+T T   +++++    T+  +K+ VE  +  IP     
Sbjct: 60  NIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEE-KEGIPPVQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQII 208
           L   G+QL + KT   Y+I+   VL ++
Sbjct: 119 LIYAGKQLADDKTAKDYNIEGGSVLHLV 146



 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/137 (32%), Positives = 69/137 (50%), Gaps = 10/137 (7%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIHNDSG 60
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL--- 69

Query: 61  VMKLYFKTPSNEKTF-----ELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESY 115
           V++L   T    KT      E+    +DTI+ IK  +E +EGIP  +  + Y GK +   
Sbjct: 70  VLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADD 129

Query: 116 ITLDVLNINNEDTLQMI 132
            T    NI     L ++
Sbjct: 130 KTAKDYNIEGGSVLHLV 146


>gi|326504848|dbj|BAK06715.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 153

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 47/145 (32%), Positives = 83/145 (57%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + TV +VK  ++  +  IP +   L   G+QL + +TLA Y+
Sbjct: 2   QIFVKTLTGKTITLEVESSDTVDNVKAKIQD-KEGIPPDQQRLIFAGKQLDDGRTLADYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    I VK L G+ I +++   DT+  +K+++  + G  P  QRL+
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           +  +QL DD+    Y I   S+++L
Sbjct: 121 YAGKQLADDKTAKDYNIEGGSVLHL 145



 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 79/148 (53%), Gaps = 3/148 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDT++N+K  I+ +EGIP  +  + + GK ++   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTVDNVKAKIQDKEGIPPDQQRLIFAGKQLDDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTST-VKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +    I V+T T   +++++    T+  +K+ VE  +  IP     
Sbjct: 60  NIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEE-KEGIPPVQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQII 208
           L   G+QL + KT   Y+I+   VL ++
Sbjct: 119 LIYAGKQLADDKTAKDYNIEGGSVLHLV 146



 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 69/137 (50%), Gaps = 10/137 (7%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIHNDSG 60
           ++V+ ++ ++ +K +I  K  E I  D   L +AG+QL++G T+ DY I   S +H    
Sbjct: 15  LEVESSDTVDNVKAKIQDK--EGIPPDQQRLIFAGKQLDDGRTLADYNIQKESTLHL--- 69

Query: 61  VMKLYFKTPSNEKTF-----ELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESY 115
           V++L   T    KT      E+    +DTI+ IK  +E +EGIP  +  + Y GK +   
Sbjct: 70  VLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADD 129

Query: 116 ITLDVLNINNEDTLQMI 132
            T    NI     L ++
Sbjct: 130 KTAKDYNIEGGSVLHLV 146


>gi|440793331|gb|ELR14518.1| polyubiquitin 4 UBQ4, putative [Acanthamoeba castellanii str. Neff]
          Length = 160

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 53/150 (35%), Positives = 80/150 (53%), Gaps = 8/150 (5%)

Query: 137 ELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPS--EDCELFRGGEQLQNLKT 193
           EL  +FV+T T  T+ +EV  + ++  VK+ ++     +P   E C L   G QL++   
Sbjct: 2   ELVFVFVKTLTGKTITIEVELSDSIGQVKQKIQERDDIVPPNHEQC-LTYAGTQLEDHHA 60

Query: 194 LAYYDIKENEVLQIIRHVKHS----IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQA 249
           LA+Y IK+   L ++   +      IF++ L G    L+V   DT+  VK  +  ++G A
Sbjct: 61  LAHYHIKKECTLHLLFRRRPDEPIRIFIRWLVGGSTRLKVRPSDTIAQVKQVIGDKMGIA 120

Query: 250 PDSQRLVFKRQQLEDDRNLASYKIVNESIV 279
           PD QRL+F  + LED   LA Y I NES V
Sbjct: 121 PDQQRLIFASKLLEDQHTLADYNIENESTV 150



 Score = 41.6 bits (96), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 47/104 (45%), Gaps = 6/104 (5%)

Query: 31  LFYAGQQLENGLTVIDYGIPNNSVIH-----NDSGVMKLYFKTPSNEKTFELKANRSDTI 85
           L YAG QLE+   +  Y I     +H          ++++ +      T  LK   SDTI
Sbjct: 48  LTYAGTQLEDHHALAHYHIKKECTLHLLFRRRPDEPIRIFIRWLVGGST-RLKVRPSDTI 106

Query: 86  ENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTL 129
             +K +I  + GI   +  + +  KL+E   TL   NI NE T+
Sbjct: 107 AQVKQVIGDKMGIAPDQQRLIFASKLLEDQHTLADYNIENESTV 150


>gi|297606280|ref|NP_001058221.2| Os06g0650100 [Oryza sativa Japonica Group]
 gi|255677281|dbj|BAF20135.2| Os06g0650100, partial [Oryza sativa Japonica Group]
          Length = 177

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 46/145 (31%), Positives = 84/145 (57%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TLA Y+
Sbjct: 26  QIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLADYN 84

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    I VK L G+ I +++   DT+  +K+++  + G  P  QRL+
Sbjct: 85  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 144

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           +  +QL DD+    Y I   S+++L
Sbjct: 145 YAGKQLADDKTAKDYNIEGGSVLHL 169



 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 79/148 (53%), Gaps = 3/148 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 25  MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 83

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTST-VKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +    I V+T T   +++++    T+  +K+ VE  +  IP     
Sbjct: 84  NIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEE-KEGIPPVQQR 142

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQII 208
           L   G+QL + KT   Y+I+   VL ++
Sbjct: 143 LIYAGKQLADDKTAKDYNIEGGSVLHLV 170



 Score = 57.8 bits (138), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 43/135 (31%), Positives = 68/135 (50%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 39  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 96

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G   +  KT +  K  E+    +DTI+ IK  +E +EGIP  +  + Y GK +    T
Sbjct: 97  LRGGTMIKVKTLTG-KEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKT 155

Query: 118 LDVLNINNEDTLQMI 132
               NI     L ++
Sbjct: 156 AKDYNIEGGSVLHLV 170


>gi|449444274|ref|XP_004139900.1| PREDICTED: ubiquitin-NEDD8-like protein RUB1-like [Cucumis sativus]
 gi|449532435|ref|XP_004173186.1| PREDICTED: ubiquitin-NEDD8-like protein RUB1-like [Cucumis sativus]
          Length = 154

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 46/145 (31%), Positives = 84/145 (57%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TLA Y+
Sbjct: 2   QIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    I VK L G+ I +++   DT+  +K+++  + G  P  QRL+
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           +  +QL DD+    Y I   S+++L
Sbjct: 121 YAGKQLGDDKTAKDYNIEGGSVLHL 145



 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 79/148 (53%), Gaps = 3/148 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTST-VKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +    I V+T T   +++++    T+  +K+ VE  +  IP     
Sbjct: 60  NIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEE-KEGIPPVQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQII 208
           L   G+QL + KT   Y+I+   VL ++
Sbjct: 119 LIYAGKQLGDDKTAKDYNIEGGSVLHLV 146



 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/137 (32%), Positives = 69/137 (50%), Gaps = 10/137 (7%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIHNDSG 60
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL--- 69

Query: 61  VMKLYFKTPSNEKTF-----ELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESY 115
           V++L   T    KT      E+    +DTI+ IK  +E +EGIP  +  + Y GK +   
Sbjct: 70  VLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLGDD 129

Query: 116 ITLDVLNINNEDTLQMI 132
            T    NI     L ++
Sbjct: 130 KTAKDYNIEGGSVLHLV 146


>gi|224083970|ref|XP_002307191.1| predicted protein [Populus trichocarpa]
 gi|118481405|gb|ABK92645.1| unknown [Populus trichocarpa]
 gi|118486039|gb|ABK94863.1| unknown [Populus trichocarpa]
 gi|222856640|gb|EEE94187.1| predicted protein [Populus trichocarpa]
          Length = 157

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 47/145 (32%), Positives = 84/145 (57%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TLA Y+
Sbjct: 2   QIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    I VK L G+ I +++   DT+  VK+++  + G  P  QRL+
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRVKERVEEKEGIPPVQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           +  +QL DD+    Y I   S+++L
Sbjct: 121 YAGKQLGDDKTARDYNIEGGSVLHL 145



 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 48/148 (32%), Positives = 79/148 (53%), Gaps = 3/148 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTST-VKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +    I V+T T   +++++    T+  VK+ VE  +  IP     
Sbjct: 60  NIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRVKERVEE-KEGIPPVQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQII 208
           L   G+QL + KT   Y+I+   VL ++
Sbjct: 119 LIYAGKQLGDDKTARDYNIEGGSVLHLV 146



 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 68/135 (50%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G   +  KT +  K  E+    +DTI+ +K  +E +EGIP  +  + Y GK +    T
Sbjct: 73  LRGGTMIKVKTLTG-KEIEIDIEPTDTIDRVKERVEEKEGIPPVQQRLIYAGKQLGDDKT 131

Query: 118 LDVLNINNEDTLQMI 132
               NI     L ++
Sbjct: 132 ARDYNIEGGSVLHLV 146


>gi|225465030|ref|XP_002265864.1| PREDICTED: ubiquitin-NEDD8-like protein RUB2 [Vitis vinifera]
 gi|297736166|emb|CBI24204.3| unnamed protein product [Vitis vinifera]
          Length = 155

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 46/145 (31%), Positives = 84/145 (57%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TLA Y+
Sbjct: 2   QIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    I VK L G+ I +++   DT+  +K+++  + G  P  QRL+
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           +  +QL DD+    Y I   S+++L
Sbjct: 121 YAGKQLGDDKTARDYNIEGGSVLHL 145



 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 79/148 (53%), Gaps = 3/148 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTST-VKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +    I V+T T   +++++    T+  +K+ VE  +  IP     
Sbjct: 60  NIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEE-KEGIPPVQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQII 208
           L   G+QL + KT   Y+I+   VL ++
Sbjct: 119 LIYAGKQLGDDKTARDYNIEGGSVLHLV 146



 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/137 (32%), Positives = 69/137 (50%), Gaps = 10/137 (7%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIHNDSG 60
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL--- 69

Query: 61  VMKLYFKTPSNEKTF-----ELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESY 115
           V++L   T    KT      E+    +DTI+ IK  +E +EGIP  +  + Y GK +   
Sbjct: 70  VLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLGDD 129

Query: 116 ITLDVLNINNEDTLQMI 132
            T    NI     L ++
Sbjct: 130 KTARDYNIEGGSVLHLV 146


>gi|13129510|gb|AAK13164.1|AC078829_16 putative polyubiquitin 5'-partial [Oryza sativa Japonica Group]
          Length = 257

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 108/207 (52%), Gaps = 9/207 (4%)

Query: 46  DYGI-PNNSVIHNDSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYD 104
           DY I  N+SV    +  +++  + PS  KT +L   +S++I +IK  IE  EGI ++E  
Sbjct: 4   DYNIMTNSSVDLYVTDAIQISVRIPSVGKTTKLNMRKSNSIADIKAEIEQEEGILMNEQI 63

Query: 105 IYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEIFVQT-PTSTVKLEVRRAHTVLDV 163
           + Y G+ +E    L   ++ N+ T  ++  P +   +F+      T+ LE +R +TV DV
Sbjct: 64  LMYAGQQLEDNQLLSQCDLRNDQTFHVLVCPNDKLHVFINVRGEKTIGLETKRWYTVADV 123

Query: 164 KKMVESMRICIPSEDCELFRG----GEQLQNLKTLAYYDIKENEVLQIIRHVKHSIFVKL 219
           K M+E++   +P+    L R     G  L + + L    +K N+ L + ++V+   FVK 
Sbjct: 124 KLMIENLE-GLPACSQILTRMQSGVGVALTDGRMLQDQHVKNNDTLLLQQNVQ--FFVKS 180

Query: 220 LNGRYIILEVAKFDTVRDVKDKLFREI 246
             G+ + + +   DT + +KD++  ++
Sbjct: 181 WEGKTLTMVLKTSDTGKQIKDRIAEKL 207



 Score = 43.1 bits (100), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 52/106 (49%), Gaps = 12/106 (11%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---- 56
           + ++K+  I  +K  I    EE IL +   L YAGQQLE+   +    + N+   H    
Sbjct: 36  LNMRKSNSIADIKAEIEQ--EEGILMNEQILMYAGQQLEDNQLLSQCDLRNDQTFHVLVC 93

Query: 57  -NDSGVMKLY-FKTPSNEKTFELKANRSDTIENIKFIIEVREGIPV 100
            ND    KL+ F     EKT  L+  R  T+ ++K +IE  EG+P 
Sbjct: 94  PND----KLHVFINVRGEKTIGLETKRWYTVADVKLMIENLEGLPA 135


>gi|1353757|gb|AAB01784.1| ubiquitin, partial [Naegleria fowleri]
          Length = 121

 Score = 72.0 bits (175), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 45/121 (37%), Positives = 72/121 (59%), Gaps = 4/121 (3%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV    T+ +VK  ++  +  IP +   L   G+QL++ +TL+ Y+
Sbjct: 1   QIFVKTLTGKTITLEVESNDTIENVKSKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYN 59

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+
Sbjct: 60  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESNDTIENVKSKIQDKEGIPPDQQRLI 119

Query: 257 F 257
           F
Sbjct: 120 F 120



 Score = 63.5 bits (153), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 33/67 (49%), Positives = 43/67 (64%)

Query: 215 IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIV 274
           IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+F  +QLED R L+ Y I 
Sbjct: 2   IFVKTLTGKTITLEVESNDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 61

Query: 275 NESIVNL 281
            ES ++L
Sbjct: 62  KESTLHL 68



 Score = 61.6 bits (148), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 40/111 (36%), Positives = 63/111 (56%), Gaps = 6/111 (5%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+  + IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 14  LEVESNDTIENVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 71

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYG 108
             G M+++ KT +  KT  L+   +DTIEN+K  I+ +EGIP  +  + + 
Sbjct: 72  LRGGMQIFVKTLTG-KTITLEVESNDTIENVKSKIQDKEGIPPDQQRLIFA 121



 Score = 58.5 bits (140), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 40/121 (33%), Positives = 65/121 (53%), Gaps = 2/121 (1%)

Query: 63  KLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLN 122
           +++ KT +  KT  L+   +DTIEN+K  I+ +EGIP  +  + + GK +E   TL   N
Sbjct: 1   QIFVKTLTG-KTITLEVESNDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 59

Query: 123 INNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCEL 181
           I  E TL ++   +   +IFV+T T  T+ LEV    T+ +VK  ++      P +   +
Sbjct: 60  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESNDTIENVKSKIQDKEGIPPDQQRLI 119

Query: 182 F 182
           F
Sbjct: 120 F 120


>gi|168024143|ref|XP_001764596.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162684174|gb|EDQ70578.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 361

 Score = 72.0 bits (175), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 76/303 (25%), Positives = 130/303 (42%), Gaps = 43/303 (14%)

Query: 21  EEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---------------NDSGVMKLY 65
            E I  +L  L Y  + L++   + DY I N S +                     M++Y
Sbjct: 36  SEIIASNLQRLSYGDRLLKDDRALEDYQIDNTSTLQMWWCKCMACRALSADQTFHTMRIY 95

Query: 66  FKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINN 125
             TP +E T  +  +R+ ++ ++K  ++  EG P     + Y  + + +  +L   NI  
Sbjct: 96  VTTPRDE-TIPVLVSRNGSVFSVKSSMQEEEGTPAVRQRLIYNDEELLNGKSLTEYNIAK 154

Query: 126 EDTLQMISV-PKELQEIFVQTPT--STVKLEVRRAHTVLDVKKMVESMRICIPSEDCELF 182
           +  L+M+ + P  L  + V       TV LEVR+  T+ DVK M+  +    P       
Sbjct: 155 DSVLRMVPMEPVGLMPVMVCIVILDRTVTLEVRKQDTIRDVKAMLHQVEGIPPYHQRLKL 214

Query: 183 RGG----------EQLQNLKTLAYYDIKENEVLQIIRHVKH--------------SIFVK 218
           R G            L +  TL   ++   +   ++R  KH                FVK
Sbjct: 215 RYGYGFFNRDMNNADLPDDSTLGELNVNRGDSFFLLRRQKHLHDCPCFECCGSSFHFFVK 274

Query: 219 LLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESI 278
            + G+ +++++  F TV DVK K+  + G A   Q+L+F   +LED++ L  Y I  +SI
Sbjct: 275 TVAGKSLVIDLKSFHTVEDVKKKVHIKEGIAIHKQKLLFGDVELEDNKTLFEYGIEVDSI 334

Query: 279 VNL 281
           + L
Sbjct: 335 LRL 337



 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 57/201 (28%), Positives = 97/201 (48%), Gaps = 20/201 (9%)

Query: 73  KTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQM- 131
           ++ ++ A+  +T+  +K  IE  E I  +   + YG +L++    L+   I+N  TLQM 
Sbjct: 14  RSIQIDASPKNTVAAVKKAIEGSEIIASNLQRLSYGDRLLKDDRALEDYQIDNTSTLQMW 73

Query: 132 ---------ISVPKELQ--EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDC 179
                    +S  +      I+V TP   T+ + V R  +V  VK  ++      P+   
Sbjct: 74  WCKCMACRALSADQTFHTMRIYVTTPRDETIPVLVSRNGSVFSVKSSMQEEE-GTPAVRQ 132

Query: 180 ELFRGGEQLQNLKTLAYYDIKENEVLQIIRH-----VKHSIFVKLLNGRYIILEVAKFDT 234
            L    E+L N K+L  Y+I ++ VL+++       +   + + +L+ R + LEV K DT
Sbjct: 133 RLIYNDEELLNGKSLTEYNIAKDSVLRMVPMEPVGLMPVMVCIVILD-RTVTLEVRKQDT 191

Query: 235 VRDVKDKLFREIGQAPDSQRL 255
           +RDVK  L +  G  P  QRL
Sbjct: 192 IRDVKAMLHQVEGIPPYHQRL 212


>gi|226532866|ref|NP_001148606.1| LOC100282222 [Zea mays]
 gi|194700092|gb|ACF84130.1| unknown [Zea mays]
 gi|195619630|gb|ACG31645.1| polyubiquitin 2 [Zea mays]
 gi|195620202|gb|ACG31931.1| polyubiquitin 2 [Zea mays]
 gi|195620238|gb|ACG31949.1| polyubiquitin 2 [Zea mays]
 gi|195620732|gb|ACG32196.1| polyubiquitin 2 [Zea mays]
 gi|195620942|gb|ACG32301.1| polyubiquitin 2 [Zea mays]
 gi|195628320|gb|ACG35990.1| polyubiquitin 2 [Zea mays]
 gi|414885492|tpg|DAA61506.1| TPA: polyubiquitin 2 isoform 1 [Zea mays]
 gi|414885493|tpg|DAA61507.1| TPA: polyubiquitin 2 isoform 2 [Zea mays]
          Length = 153

 Score = 72.0 bits (175), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 46/145 (31%), Positives = 84/145 (57%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + TV +VK  ++  +  IP +   L   G+QL++ +TLA Y+
Sbjct: 2   QIFVKTLTGKTITLEVESSDTVDNVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    I VK L G+ I +++   D++  +K+++  + G  P  QRL+
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDSIDRIKERVEEKEGIPPVQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           +  +QL DD+    Y I   S+++L
Sbjct: 121 YAGKQLADDKTAKDYNIEGGSVLHL 145



 Score = 60.8 bits (146), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 79/148 (53%), Gaps = 3/148 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDT++N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTVDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTST-VKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +    I V+T T   +++++    ++  +K+ VE  +  IP     
Sbjct: 60  NIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDSIDRIKERVEE-KEGIPPVQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQII 208
           L   G+QL + KT   Y+I+   VL ++
Sbjct: 119 LIYAGKQLADDKTAKDYNIEGGSVLHLV 146



 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 68/135 (50%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ ++ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTVDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G   +  KT +  K  E+    +D+I+ IK  +E +EGIP  +  + Y GK +    T
Sbjct: 73  LRGGTMIKVKTLTG-KEIEIDIEPTDSIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKT 131

Query: 118 LDVLNINNEDTLQMI 132
               NI     L ++
Sbjct: 132 AKDYNIEGGSVLHLV 146


>gi|19715913|emb|CAC84144.1| polyubiquitin-like protein [Nicotiana tabacum]
          Length = 109

 Score = 72.0 bits (175), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 40/92 (43%), Positives = 57/92 (61%), Gaps = 2/92 (2%)

Query: 192 KTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQA 249
           +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  
Sbjct: 10  RTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIP 69

Query: 250 PDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 70  PDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 101



 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/97 (37%), Positives = 54/97 (55%), Gaps = 4/97 (4%)

Query: 39  ENGLTVIDYGIPNNSVIH---NDSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVR 95
           E+G T+ DY I   S +H      G M+++ KT +  KT  L+   SDTI+N+K  I+ +
Sbjct: 7   EDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDK 65

Query: 96  EGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMI 132
           EGIP  +  + + GK +E   TL   NI  E TL ++
Sbjct: 66  EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 102



 Score = 46.6 bits (109), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 55/97 (56%), Gaps = 2/97 (2%)

Query: 117 TLDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIP 175
           TL   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP
Sbjct: 11  TLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIP 69

Query: 176 SEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVK 212
            +   L   G+QL++ +TLA Y+I++   L ++  ++
Sbjct: 70  PDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 106



 Score = 38.9 bits (89), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 21/56 (37%), Positives = 34/56 (60%), Gaps = 2/56 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH 56
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H
Sbjct: 47  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 100


>gi|255544634|ref|XP_002513378.1| ubiquitin, putative [Ricinus communis]
 gi|223547286|gb|EEF48781.1| ubiquitin, putative [Ricinus communis]
          Length = 154

 Score = 71.6 bits (174), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 46/145 (31%), Positives = 84/145 (57%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TLA Y+
Sbjct: 2   QIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    I VK L G+ I +++   DT+  +K+++  + G  P  QRL+
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           +  +QL DD+    Y I   S+++L
Sbjct: 121 YAGKQLGDDKTARDYNIEGGSVLHL 145



 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 48/156 (30%), Positives = 82/156 (52%), Gaps = 3/156 (1%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTST-VKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +    I V+T T   +++++    T+  +K+ VE  +  IP     
Sbjct: 60  NIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEE-KEGIPPVQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSIF 216
           L   G+QL + KT   Y+I+   VL ++  ++   F
Sbjct: 119 LIYAGKQLGDDKTARDYNIEGGSVLHLVLALRGGCF 154



 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/137 (32%), Positives = 69/137 (50%), Gaps = 10/137 (7%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIHNDSG 60
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL--- 69

Query: 61  VMKLYFKTPSNEKTF-----ELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESY 115
           V++L   T    KT      E+    +DTI+ IK  +E +EGIP  +  + Y GK +   
Sbjct: 70  VLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLGDD 129

Query: 116 ITLDVLNINNEDTLQMI 132
            T    NI     L ++
Sbjct: 130 KTARDYNIEGGSVLHLV 146


>gi|159472362|ref|XP_001694320.1| ubiquitin [Chlamydomonas reinhardtii]
 gi|158276983|gb|EDP02753.1| ubiquitin [Chlamydomonas reinhardtii]
          Length = 242

 Score = 71.6 bits (174), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 55/154 (35%), Positives = 82/154 (53%), Gaps = 11/154 (7%)

Query: 138 LQEIFVQTPTS-TVKLE-VRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLA 195
           L+ ++V+T T  T+ L+ V     V D+K M++ +   IP ++  L   G QL++  TLA
Sbjct: 76  LRPLYVKTLTGKTITLQDVHSDLDVYDLKCMIDELE-GIPPDEQRLVFAGRQLEDADTLA 134

Query: 196 YYDIKENEVLQIIRHVKHS-------IFVKLLNGRYIILEVAKFD-TVRDVKDKLFREIG 247
            Y+I +   L +I  + H        ++VK L G+ I L+    D  V D+K  +    G
Sbjct: 135 SYNISKESTLHLILRLGHPGVAIQVPLYVKTLTGKTITLQDVHSDLDVYDLKCMIDELEG 194

Query: 248 QAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
             PD QRLVF  +QLED   LASY I  ES ++L
Sbjct: 195 IPPDEQRLVFAGRQLEDADTLASYNISKESTLHL 228



 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 57/178 (32%), Positives = 91/178 (51%), Gaps = 23/178 (12%)

Query: 50  PNNSVIHNDSGVMK-LYFKTPSNEKTFELKANRSD-TIENIKFIIEVREGIPVHEYDIYY 107
           PN+S   + S V++ LY KT +  KT  L+   SD  + ++K +I+  EGIP  E  + +
Sbjct: 66  PNSS--GSQSVVLRPLYVKTLTG-KTITLQDVHSDLDVYDLKCMIDELEGIPPDEQRLVF 122

Query: 108 GGKLIESYITLDVLNINNEDTLQM----------ISVPKELQEIFVQTPTS-TVKLE-VR 155
            G+ +E   TL   NI+ E TL +          I VP     ++V+T T  T+ L+ V 
Sbjct: 123 AGRQLEDADTLASYNISKESTLHLILRLGHPGVAIQVP-----LYVKTLTGKTITLQDVH 177

Query: 156 RAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKH 213
               V D+K M++ +   IP ++  L   G QL++  TLA Y+I +   L +I  + H
Sbjct: 178 SDLDVYDLKCMIDELE-GIPPDEQRLVFAGRQLEDADTLASYNISKESTLHLILRLGH 234



 Score = 54.3 bits (129), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 42/120 (35%), Positives = 61/120 (50%), Gaps = 10/120 (8%)

Query: 22  EEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH-----NDSGV---MKLYFKTPSNEK 73
           E I  D   L +AG+QLE+  T+  Y I   S +H        GV   + LY KT +  K
Sbjct: 111 EGIPPDEQRLVFAGRQLEDADTLASYNISKESTLHLILRLGHPGVAIQVPLYVKTLTG-K 169

Query: 74  TFELKANRSD-TIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMI 132
           T  L+   SD  + ++K +I+  EGIP  E  + + G+ +E   TL   NI+ E TL +I
Sbjct: 170 TITLQDVHSDLDVYDLKCMIDELEGIPPDEQRLVFAGRQLEDADTLASYNISKESTLHLI 229


>gi|224140179|ref|XP_002323462.1| predicted protein [Populus trichocarpa]
 gi|222868092|gb|EEF05223.1| predicted protein [Populus trichocarpa]
          Length = 115

 Score = 71.6 bits (174), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 43/110 (39%), Positives = 62/110 (56%), Gaps = 9/110 (8%)

Query: 174 IPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSI--FVKLLNGRYIILEVAK 231
           IP +   L   G+QL++ +TLA Y+I++   L ++  ++  I  FVK L G+ I LEV  
Sbjct: 4   IPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIQIFVKTLTGKTITLEVES 63

Query: 232 FDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
            DT+ +VK K         D QRL+F  +QLED R LA Y +  ES  +L
Sbjct: 64  SDTIDNVKTK-------NQDQQRLIFAGKQLEDGRTLADYNVQKESTFHL 106



 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/118 (31%), Positives = 59/118 (50%), Gaps = 11/118 (9%)

Query: 22  EEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---NDSGVMKLYFKTPSNEKTFELK 78
           E I  D   L +AG+QLE+G T+ DY I   S +H      G ++++ KT +  KT  L+
Sbjct: 2   EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIQIFVKTLTG-KTITLE 60

Query: 79  ANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMISVPK 136
              SDTI+N+K   +        +  + + GK +E   TL   N+  E T  ++  P+
Sbjct: 61  VESSDTIDNVKTKNQ-------DQQRLIFAGKQLEDGRTLADYNVQKESTFHLVLRPR 111



 Score = 48.5 bits (114), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 35/122 (28%), Positives = 61/122 (50%), Gaps = 9/122 (7%)

Query: 96  EGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEV 154
           EGIP  +  + + GK +E   TL   NI  E TL ++   +   +IFV+T T  T+ LEV
Sbjct: 2   EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIQIFVKTLTGKTITLEV 61

Query: 155 RRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
             + T+ +VK   +  +         L   G+QL++ +TLA Y++++     ++   +  
Sbjct: 62  ESSDTIDNVKTKNQDQQ--------RLIFAGKQLEDGRTLADYNVQKESTFHLVLRPRGG 113

Query: 215 IF 216
            F
Sbjct: 114 DF 115



 Score = 40.8 bits (94), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 19/35 (54%), Positives = 23/35 (65%)

Query: 247 GQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           G  PD QRL+F  +QLED R LA Y I  ES ++L
Sbjct: 3   GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 37


>gi|388508634|gb|AFK42383.1| unknown [Medicago truncatula]
          Length = 153

 Score = 71.2 bits (173), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 45/145 (31%), Positives = 84/145 (57%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TLA Y+
Sbjct: 2   QIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    I VK L G+ I +++   DT+  +K+++  + G  P  QR++
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRVI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           +  +QL DD+    Y I   S+++L
Sbjct: 121 YAGKQLADDKTAKEYNIEGGSVLHL 145



 Score = 61.6 bits (148), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 3/148 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTST-VKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +    I V+T T   +++++    T+  +K+ VE  +  IP     
Sbjct: 60  NIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEE-KEGIPPVQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQII 208
           +   G+QL + KT   Y+I+   VL ++
Sbjct: 119 VIYAGKQLADDKTAKEYNIEGGSVLHLV 146



 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 43/135 (31%), Positives = 68/135 (50%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G   +  KT +  K  E+    +DTI+ IK  +E +EGIP  +  + Y GK +    T
Sbjct: 73  LRGGTMIKVKTLTG-KEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRVIYAGKQLADDKT 131

Query: 118 LDVLNINNEDTLQMI 132
               NI     L ++
Sbjct: 132 AKEYNIEGGSVLHLV 146


>gi|224066593|ref|XP_002302153.1| predicted protein [Populus trichocarpa]
 gi|224082516|ref|XP_002306725.1| predicted protein [Populus trichocarpa]
 gi|118485172|gb|ABK94447.1| unknown [Populus trichocarpa]
 gi|222843879|gb|EEE81426.1| predicted protein [Populus trichocarpa]
 gi|222856174|gb|EEE93721.1| predicted protein [Populus trichocarpa]
          Length = 154

 Score = 71.2 bits (173), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 46/145 (31%), Positives = 84/145 (57%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TLA Y+
Sbjct: 2   QIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    I VK L G+ I +++   DT+  +K+++  + G  P  QRL+
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPNDTIDRIKERVEEKEGIPPVQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           +  +QL DD+    Y I   S+++L
Sbjct: 121 YAGKQLGDDKTARDYNIEGGSVLHL 145



 Score = 61.6 bits (148), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 47/156 (30%), Positives = 81/156 (51%), Gaps = 3/156 (1%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTST-VKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +    I V+T T   +++++    T+  +K+ VE  +  IP     
Sbjct: 60  NIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPNDTIDRIKERVEE-KEGIPPVQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSIF 216
           L   G+QL + KT   Y+I+   VL ++  ++    
Sbjct: 119 LIYAGKQLGDDKTARDYNIEGGSVLHLVLALRGGCL 154



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/135 (31%), Positives = 68/135 (50%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G   +  KT +  K  E+    +DTI+ IK  +E +EGIP  +  + Y GK +    T
Sbjct: 73  LRGGTMIKVKTLTG-KEIEIDIEPNDTIDRIKERVEEKEGIPPVQQRLIYAGKQLGDDKT 131

Query: 118 LDVLNINNEDTLQMI 132
               NI     L ++
Sbjct: 132 ARDYNIEGGSVLHLV 146


>gi|296415756|ref|XP_002837552.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295633424|emb|CAZ81743.1| unnamed protein product [Tuber melanosporum]
          Length = 205

 Score = 71.2 bits (173), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 50/145 (34%), Positives = 77/145 (53%), Gaps = 21/145 (14%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + T+ +VK  ++     IP +   L   G+QL++ +TL+ Y+
Sbjct: 2   QIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEG-IPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    IFVK L G+ I LE                  G  PD QRL+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEE-----------------GIPPDQQRLI 103

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           F  +QLED R L+ Y I  ES ++L
Sbjct: 104 FAGKQLEDGRTLSDYNIQKESTLHL 128



 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 76/148 (51%), Gaps = 20/148 (13%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LE                    IP +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEEG------------------IPPDQQR 101

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQII 208
           L   G+QL++ +TL+ Y+I++   L ++
Sbjct: 102 LIFAGKQLEDGRTLSDYNIQKESTLHLV 129



 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 40/135 (29%), Positives = 65/135 (48%), Gaps = 23/135 (17%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G M+++ KT + +                   I + EGIP  +  + + GK +E   T
Sbjct: 73  LRGGMQIFVKTLTGK------------------TITLEEGIPPDQQRLIFAGKQLEDGRT 114

Query: 118 LDVLNINNEDTLQMI 132
           L   NI  E TL ++
Sbjct: 115 LSDYNIQKESTLHLV 129


>gi|222635996|gb|EEE66128.1| hypothetical protein OsJ_22175 [Oryza sativa Japonica Group]
          Length = 208

 Score = 71.2 bits (173), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 46/145 (31%), Positives = 84/145 (57%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TLA Y+
Sbjct: 2   QIFVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    I VK L G+ I +++   DT+  +K+++  + G  P  QRL+
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           +  +QL DD+    Y I   S+++L
Sbjct: 121 YAGKQLADDKTAKDYNIEGGSVLHL 145



 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 85/164 (51%), Gaps = 3/164 (1%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTST-VKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +    I V+T T   +++++    T+  +K+ VE  +  IP     
Sbjct: 60  NIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEE-KEGIPPVQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSIFVKLLNGRY 224
           L   G+QL + KT   Y+I+   VL ++  ++      +L  +Y
Sbjct: 119 LIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGDTADPILIDKY 162



 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 43/135 (31%), Positives = 68/135 (50%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G   +  KT +  K  E+    +DTI+ IK  +E +EGIP  +  + Y GK +    T
Sbjct: 73  LRGGTMIKVKTLTG-KEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKT 131

Query: 118 LDVLNINNEDTLQMI 132
               NI     L ++
Sbjct: 132 AKDYNIEGGSVLHLV 146


>gi|323353866|gb|EGA85719.1| Ubi4p [Saccharomyces cerevisiae VL3]
          Length = 123

 Score = 71.2 bits (173), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 45/123 (36%), Positives = 73/123 (59%), Gaps = 4/123 (3%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TL+ Y+
Sbjct: 2   QIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLI 120

Query: 257 FKR 259
             R
Sbjct: 121 LCR 123



 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/67 (49%), Positives = 43/67 (64%)

Query: 215 IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIV 274
           IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+F  +QLED R L+ Y I 
Sbjct: 3   IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 62

Query: 275 NESIVNL 281
            ES ++L
Sbjct: 63  KESTLHL 69



 Score = 61.6 bits (148), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 39/102 (38%), Positives = 61/102 (59%), Gaps = 6/102 (5%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIP 99
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIP 113



 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 39/108 (36%), Positives = 63/108 (58%), Gaps = 2/108 (1%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVE 168
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQ 107


>gi|326526143|dbj|BAJ93248.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 245

 Score = 71.2 bits (173), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 48/140 (34%), Positives = 76/140 (54%), Gaps = 4/140 (2%)

Query: 149 TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQI- 207
           T+ LEV  ++T+ DVK  ++  +  IP+ +  L  G E L +  +L  Y I+E   L + 
Sbjct: 30  TITLEVMGSNTIYDVKDKIQE-KEGIPAGEQRLMFGSELLVDSCSLEDYSIEEESTLTLD 88

Query: 208 -IRHVKHSIFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDR 266
            +    H IF++  +G+ + + V   D++  VK K F E G  P  QRL F  +QLED R
Sbjct: 89  LVPRGMH-IFIRTRSGKTMTIGVEGEDSLYSVKAKFFDETGIPPSRQRLFFAGKQLEDGR 147

Query: 267 NLASYKIVNESIVNLTDLGM 286
            LA Y + NES +++   G+
Sbjct: 148 TLADYDVQNESTLHVVLRGI 167



 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 54/192 (28%), Positives = 99/192 (51%), Gaps = 12/192 (6%)

Query: 73  KTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMI 132
           KT  L+   S+TI ++K  I+ +EGIP  E  + +G +L+    +L+  +I  E TL + 
Sbjct: 29  KTITLEVMGSNTIYDVKDKIQEKEGIPAGEQRLMFGSELLVDSCSLEDYSIEEESTLTLD 88

Query: 133 SVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVK-KMVESMRICIPSEDCELFRGGEQLQN 190
            VP+ +  IF++T +  T+ + V    ++  VK K  +     IP     LF  G+QL++
Sbjct: 89  LVPRGMH-IFIRTRSGKTMTIGVEGEDSLYSVKAKFFDETG--IPPSRQRLFFAGKQLED 145

Query: 191 LKTLAYYDIKENEVLQII------RHVKHSIFVKLLNGRYIILEVAK-FDTVRDVKDKLF 243
            +TLA YD++    L ++      +  +  I VK + G+ +I    K    + ++K  ++
Sbjct: 146 GRTLADYDVQNESTLHVVLRGITRQSGEMRISVKTVTGKKVIEHAMKRRQAIDNIKAWIY 205

Query: 244 REIGQAPDSQRL 255
            E+   P+ Q+L
Sbjct: 206 SELCILPEEQQL 217



 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 27/69 (39%), Positives = 38/69 (55%), Gaps = 7/69 (10%)

Query: 31  LFYAGQQLENGLTVIDYGIPNNSVIH-------NDSGVMKLYFKTPSNEKTFELKANRSD 83
           LF+AG+QLE+G T+ DY + N S +H         SG M++  KT + +K  E    R  
Sbjct: 136 LFFAGKQLEDGRTLADYDVQNESTLHVVLRGITRQSGEMRISVKTVTGKKVIEHAMKRRQ 195

Query: 84  TIENIKFII 92
            I+NIK  I
Sbjct: 196 AIDNIKAWI 204


>gi|168022983|ref|XP_001764018.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162684757|gb|EDQ71157.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 334

 Score = 70.9 bits (172), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 72/303 (23%), Positives = 126/303 (41%), Gaps = 43/303 (14%)

Query: 21  EEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---------------NDSGVMKLY 65
            E I   L  L Y G+ L++   + DY I N S +                     M++Y
Sbjct: 23  SEIIGASLQRLSYGGRLLKDERALEDYQIDNTSTLQMWWCKCMACRALSADQTFHTMRIY 82

Query: 66  FKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINN 125
             T   ++T  L   R+ ++ ++K ++   EG P     + +  + + +  TL+  N+  
Sbjct: 83  VAT-HRDQTIPLTVCRNGSVYSVKAMVREEEGTPAGRQRLIFNDEELRNGKTLNECNVAK 141

Query: 126 EDTLQMISV-PKELQEIFVQTPT--STVKLEVRRAHTVLDVKKMVESMRICIPSEDCELF 182
           +  L+M    P  L  + V       T+ LEVR+  T+ DVK ++  +    P       
Sbjct: 142 DCVLRMAPTEPVGLMPVMVCIAILDRTISLEVRKTDTIRDVKAVLHQVEGIPPYHQRLKL 201

Query: 183 RGGEQLQNLK----------TLAYYDIKENEVLQIIRHVKH--------------SIFVK 218
           R G    N            TL   ++   +   ++R  KH                FVK
Sbjct: 202 RYGYGFFNRDMNNADLPDDITLGELNVNRGDSFFLLRRQKHLPDCPCFECFGSSFHFFVK 261

Query: 219 LLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESI 278
            + G+ +++++  F TV D+K K+  + G A   Q+L+F   +L+DD+ L  Y I  +SI
Sbjct: 262 TVAGKSLVIDLKSFHTVDDIKRKIQSKEGIAAHKQKLLFGDVELQDDKTLFEYGIEVDSI 321

Query: 279 VNL 281
           + L
Sbjct: 322 LRL 324



 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 58/201 (28%), Positives = 95/201 (47%), Gaps = 20/201 (9%)

Query: 73  KTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQM- 131
           ++ ++ A+  +T+  +K  IE  E I      + YGG+L++    L+   I+N  TLQM 
Sbjct: 1   RSIQIDASPKNTVLAVKKAIEGSEIIGASLQRLSYGGRLLKDERALEDYQIDNTSTLQMW 60

Query: 132 ---------ISVPKELQEIFVQTPT---STVKLEVRRAHTVLDVKKMVESMRICIPSEDC 179
                    +S  +    + +   T    T+ L V R  +V  VK MV       P+   
Sbjct: 61  WCKCMACRALSADQTFHTMRIYVATHRDQTIPLTVCRNGSVYSVKAMVREEEG-TPAGRQ 119

Query: 180 ELFRGGEQLQNLKTLAYYDIKENEVLQI-----IRHVKHSIFVKLLNGRYIILEVAKFDT 234
            L    E+L+N KTL   ++ ++ VL++     +  +   + + +L+ R I LEV K DT
Sbjct: 120 RLIFNDEELRNGKTLNECNVAKDCVLRMAPTEPVGLMPVMVCIAILD-RTISLEVRKTDT 178

Query: 235 VRDVKDKLFREIGQAPDSQRL 255
           +RDVK  L +  G  P  QRL
Sbjct: 179 IRDVKAVLHQVEGIPPYHQRL 199



 Score = 50.4 bits (119), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 55/225 (24%), Positives = 105/225 (46%), Gaps = 35/225 (15%)

Query: 16  IHAKVEEEILEDLP----ELFYAGQQLENGLTVIDYGIPNNSVIHNDS----GVMKLYFK 67
           + A V EE  E  P     L +  ++L NG T+ +  +  + V+        G+M +   
Sbjct: 104 VKAMVREE--EGTPAGRQRLIFNDEELRNGKTLNECNVAKDCVLRMAPTEPVGLMPVMVC 161

Query: 68  TPSNEKTFELKANRSDTIENIKFIIEVREGIPVHE--YDIYYGGKL---------IESYI 116
               ++T  L+  ++DTI ++K ++   EGIP +     + YG            +   I
Sbjct: 162 IAILDRTISLEVRKTDTIRDVKAVLHQVEGIPPYHQRLKLRYGYGFFNRDMNNADLPDDI 221

Query: 117 TLDVLNINNEDTLQMISVPKELQEI------------FVQTPTS-TVKLEVRRAHTVLDV 163
           TL  LN+N  D+  ++   K L +             FV+T    ++ ++++  HTV D+
Sbjct: 222 TLGELNVNRGDSFFLLRRQKHLPDCPCFECFGSSFHFFVKTVAGKSLVIDLKSFHTVDDI 281

Query: 164 KKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQII 208
           K+ ++S +  I +   +L  G  +LQ+ KTL  Y I+ + +L+++
Sbjct: 282 KRKIQS-KEGIAAHKQKLLFGDVELQDDKTLFEYGIEVDSILRLM 325


>gi|237874153|ref|NP_001153849.1| ubiquitin C-like [Acyrthosiphon pisum]
 gi|239790549|dbj|BAH71829.1| hypothetical protein [Acyrthosiphon pisum]
          Length = 147

 Score = 70.9 bits (172), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 44/144 (30%), Positives = 81/144 (56%), Gaps = 6/144 (4%)

Query: 140 EIFVQTPTSTVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDI 199
           +IF++    T+ LEV  + ++ +V  M++  +  IP +   L     QL+  +TL+ Y+I
Sbjct: 2   QIFIK---KTITLEVESSDSIENVMAMIQD-KEGIPPDQQLLIFASNQLEKRRTLSNYNI 57

Query: 200 KENEVLQIIRHVKH--SIFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVF 257
                L ++   +    IF+K LNG+    +V   D++ +++ K+  ++G  PD  RL+F
Sbjct: 58  HNGSTLHLVLRPRDDIQIFIKELNGKMTKFKVKTSDSIENLRAKIHDKLGIIPDKHRLIF 117

Query: 258 KRQQLEDDRNLASYKIVNESIVNL 281
             +QLE+ R L+SYKI + S ++L
Sbjct: 118 AGRQLENGRTLSSYKIHDGSRLHL 141



 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/142 (26%), Positives = 77/142 (54%), Gaps = 2/142 (1%)

Query: 72  EKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQM 131
           +KT  L+   SD+IEN+  +I+ +EGIP  +  + +    +E   TL   NI+N  TL +
Sbjct: 6   KKTITLEVESSDSIENVMAMIQDKEGIPPDQQLLIFASNQLEKRRTLSNYNIHNGSTLHL 65

Query: 132 ISVPKELQEIFVQTPTSTV-KLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQN 190
           +  P++  +IF++     + K +V+ + ++ +++  +      IP +   +F  G QL+N
Sbjct: 66  VLRPRDDIQIFIKELNGKMTKFKVKTSDSIENLRAKIHDKLGIIPDKHRLIF-AGRQLEN 124

Query: 191 LKTLAYYDIKENEVLQIIRHVK 212
            +TL+ Y I +   L ++  ++
Sbjct: 125 GRTLSSYKIHDGSRLHLVMRIR 146



 Score = 44.7 bits (104), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 24/55 (43%), Positives = 35/55 (63%), Gaps = 2/55 (3%)

Query: 2   KVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH 56
           KVK ++ IE L+ +IH K+   I+ D   L +AG+QLENG T+  Y I + S +H
Sbjct: 88  KVKTSDSIENLRAKIHDKLG--IIPDKHRLIFAGRQLENGRTLSSYKIHDGSRLH 140



 Score = 43.5 bits (101), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 67/135 (49%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +   I  K  E I  D   L +A  QLE   T+ +Y I N S +H    
Sbjct: 11  LEVESSDSIENVMAMIQDK--EGIPPDQQLLIFASNQLEKRRTLSNYNIHNGSTLHLVLR 68

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
               ++++ K   N K  + K   SD+IEN++  I  + GI   ++ + + G+ +E+  T
Sbjct: 69  PRDDIQIFIKE-LNGKMTKFKVKTSDSIENLRAKIHDKLGIIPDKHRLIFAGRQLENGRT 127

Query: 118 LDVLNINNEDTLQMI 132
           L    I++   L ++
Sbjct: 128 LSSYKIHDGSRLHLV 142


>gi|156396888|ref|XP_001637624.1| predicted protein [Nematostella vectensis]
 gi|156224738|gb|EDO45561.1| predicted protein [Nematostella vectensis]
          Length = 147

 Score = 70.9 bits (172), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 46/144 (31%), Positives = 85/144 (59%), Gaps = 3/144 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TL+ Y+
Sbjct: 2   QIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 199 IKENEVLQIIRHVKHSIFVKL-LNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVF 257
           I++   L ++  ++  + + +  + +   L+V   DTV  VK+K+    G  P  QRL++
Sbjct: 61  IQKESTLHLVLRLRGGMQISVKAHWKTFTLDVEASDTVESVKEKIQNREGIPPKVQRLLY 120

Query: 258 KRQQLEDDRNLASYKIVNESIVNL 281
           + ++L D+R+LA Y I   SI++L
Sbjct: 121 EEEELVDNRSLADYNIKQGSILHL 144



 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/146 (33%), Positives = 81/146 (55%), Gaps = 2/146 (1%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTSTVKLEVRRAHTVLDVKKMVESMRICIPSEDCEL 181
           NI  E TL ++   +   +I V+    T  L+V  + TV  VK+ +++ R  IP +   L
Sbjct: 60  NIQKESTLHLVLRLRGGMQISVKAHWKTFTLDVEASDTVESVKEKIQN-REGIPPKVQRL 118

Query: 182 FRGGEQLQNLKTLAYYDIKENEVLQI 207
               E+L + ++LA Y+IK+  +L +
Sbjct: 119 LYEEEELVDNRSLADYNIKQGSILHL 144



 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 40/102 (39%), Positives = 60/102 (58%), Gaps = 7/102 (6%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIP 99
             G M++  K  ++ KTF L    SDT+E++K  I+ REGIP
Sbjct: 73  LRGGMQISVK--AHWKTFTLDVEASDTVESVKEKIQNREGIP 112


>gi|324522667|gb|ADY48104.1| Polyubiquitin-A [Ascaris suum]
          Length = 194

 Score = 70.5 bits (171), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 46/130 (35%), Positives = 76/130 (58%), Gaps = 4/130 (3%)

Query: 131 MISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQ 189
           M++      +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL+
Sbjct: 1   MLAASTISMQIFVKTLTGKTITLEVEASDTIENVKAKIQD-KEGIPPDQQRLIFAGKQLE 59

Query: 190 NLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIG 247
           + +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G
Sbjct: 60  DGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG 119

Query: 248 QAPDSQRLVF 257
             PD QRL+F
Sbjct: 120 IPPDQQRLIF 129



 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 43/113 (38%), Positives = 66/113 (58%), Gaps = 6/113 (5%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 23  LEVEASDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 80

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGK 110
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK
Sbjct: 81  LRGGMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGK 132



 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/71 (46%), Positives = 44/71 (61%)

Query: 211 VKHSIFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLAS 270
           +   IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+F  +QLED R L+ 
Sbjct: 7   ISMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 66

Query: 271 YKIVNESIVNL 281
           Y I  ES ++L
Sbjct: 67  YNIQKESTLHL 77



 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 71/129 (55%), Gaps = 2/129 (1%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 9   MQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 67

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++      P +   
Sbjct: 68  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 127

Query: 181 LFRGGEQLQ 189
           +F G  +++
Sbjct: 128 IFAGKRRIR 136


>gi|170575532|ref|XP_001893281.1| ubiquitin [Brugia malayi]
 gi|158600819|gb|EDP37893.1| ubiquitin, putative [Brugia malayi]
          Length = 193

 Score = 70.5 bits (171), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 37/78 (47%), Positives = 49/78 (62%)

Query: 204 VLQIIRHVKHSIFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLE 263
           +L +  HVK  IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+F  +QLE
Sbjct: 23  MLWVHNHVKMQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE 82

Query: 264 DDRNLASYKIVNESIVNL 281
           D R L+ Y I  ES ++L
Sbjct: 83  DGRTLSDYNIQKESTLHL 100



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 28/71 (39%), Positives = 42/71 (59%), Gaps = 1/71 (1%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 32  MQIFVKTLTG-KTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 90

Query: 122 NINNEDTLQMI 132
           NI  E TL ++
Sbjct: 91  NIQKESTLHLV 101



 Score = 38.9 bits (89), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 22/56 (39%), Positives = 34/56 (60%), Gaps = 2/56 (3%)

Query: 1  MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH 56
          ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H
Sbjct: 46 LEVESSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 99


>gi|148905774|gb|ABR16051.1| unknown [Picea sitchensis]
 gi|148906367|gb|ABR16338.1| unknown [Picea sitchensis]
 gi|148906448|gb|ABR16377.1| unknown [Picea sitchensis]
          Length = 153

 Score = 70.5 bits (171), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 43/145 (29%), Positives = 84/145 (57%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ L+V  + T+ ++K  ++  +  IP +   L   G+QL++ +TLA Y+
Sbjct: 2   QIFVKTLTGKTITLDVESSDTIDNIKSKIQD-KEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 199 IKENEVLQIIRHVKH--SIFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++   SI VK L G+ + +++   DT+  +K ++  + G  P  QRL+
Sbjct: 61  IQKESTLHLVLRLRGGISIKVKTLTGKEVEIDIEPHDTIERIKQRVEEKEGIPPIQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           +  +Q+ DD+    Y I   S+++L
Sbjct: 121 YGGKQMNDDKTAREYNIEGGSVLHL 145



 Score = 64.3 bits (155), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 49/148 (33%), Positives = 79/148 (53%), Gaps = 3/148 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L    SDTI+NIK  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLDVESSDTIDNIKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTST-VKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +    I V+T T   V++++    T+  +K+ VE  +  IP     
Sbjct: 60  NIQKESTLHLVLRLRGGISIKVKTLTGKEVEIDIEPHDTIERIKQRVEE-KEGIPPIQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQII 208
           L  GG+Q+ + KT   Y+I+   VL ++
Sbjct: 119 LIYGGKQMNDDKTAREYNIEGGSVLHLV 146



 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/135 (33%), Positives = 68/135 (50%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           + V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LDVESSDTIDNIKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G + +  KT +  K  E+     DTIE IK  +E +EGIP  +  + YGGK +    T
Sbjct: 73  LRGGISIKVKTLTG-KEVEIDIEPHDTIERIKQRVEEKEGIPPIQQRLIYGGKQMNDDKT 131

Query: 118 LDVLNINNEDTLQMI 132
               NI     L ++
Sbjct: 132 AREYNIEGGSVLHLV 146


>gi|323308175|gb|EGA61425.1| Ubi4p [Saccharomyces cerevisiae FostersO]
          Length = 131

 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/92 (41%), Positives = 57/92 (61%), Gaps = 2/92 (2%)

Query: 192 KTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQA 249
           +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  
Sbjct: 1   RTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIP 60

Query: 250 PDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 61  PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 92



 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 46/126 (36%), Positives = 70/126 (55%), Gaps = 5/126 (3%)

Query: 43  TVIDYGIPNNSVIH---NDSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIP 99
           T+ DY I   S +H      G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP
Sbjct: 2   TLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIP 60

Query: 100 VHEYDIYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAH 158
             +  + + GK +E   TL   NI  E TL ++   +   +IFV+T T  T+ LEV  + 
Sbjct: 61  PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSD 120

Query: 159 TVLDVK 164
           T+ +VK
Sbjct: 121 TIDNVK 126



 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 46/131 (35%), Positives = 74/131 (56%), Gaps = 4/131 (3%)

Query: 117 TLDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIP 175
           TL   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP
Sbjct: 2   TLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIP 60

Query: 176 SEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFD 233
            +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   D
Sbjct: 61  PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSD 120

Query: 234 TVRDVKDKLFR 244
           T+ +VK K  R
Sbjct: 121 TIDNVKSKNSR 131



 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/92 (36%), Positives = 54/92 (58%), Gaps = 6/92 (6%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 38  LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 95

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIK 89
             G M+++ KT +  KT  L+   SDTI+N+K
Sbjct: 96  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVK 126


>gi|158148903|dbj|BAF81986.1| polyubiquitin [Glehnia littoralis]
          Length = 141

 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 50/140 (35%), Positives = 77/140 (55%), Gaps = 4/140 (2%)

Query: 117 TLDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIP 175
           TL   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK   +  +  IP
Sbjct: 3   TLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKTQD-KEGIP 61

Query: 176 SEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFD 233
            +   L   G+QL+  +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   D
Sbjct: 62  PDQQWLIFAGKQLEAGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSD 121

Query: 234 TVRDVKDKLFREIGQAPDSQ 253
           T+ +VK K+  + G  PD Q
Sbjct: 122 TIDNVKAKIQDKEGIPPDQQ 141



 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 47/141 (33%), Positives = 75/141 (53%), Gaps = 5/141 (3%)

Query: 41  GLTVIDYGIPNNSVIH---NDSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREG 97
           G T+ DY I   S +H      G M+++ KT +  KT  L+   SDTI+N+K   + +EG
Sbjct: 1   GRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKTQDKEG 59

Query: 98  IPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRR 156
           IP  +  + + GK +E+  TL   NI  E TL ++   +   +IFV+T T  T+ LEV  
Sbjct: 60  IPPDQQWLIFAGKQLEAGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVES 119

Query: 157 AHTVLDVKKMVESMRICIPSE 177
           + T+ +VK  ++      P +
Sbjct: 120 SDTIDNVKAKIQDKEGIPPDQ 140



 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/92 (41%), Positives = 54/92 (58%), Gaps = 2/92 (2%)

Query: 192 KTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQA 249
           +TLA Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K   + G  
Sbjct: 2   RTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKTQDKEGIP 61

Query: 250 PDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           PD Q L+F  +QLE  R LA Y I  ES ++L
Sbjct: 62  PDQQWLIFAGKQLEAGRTLADYNIQKESTLHL 93



 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/102 (37%), Positives = 59/102 (57%), Gaps = 6/102 (5%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +   K  E I  D   L +AG+QLE G T+ DY I   S +H    
Sbjct: 39  LEVESSDTIDNVKAKTQDK--EGIPPDQQWLIFAGKQLEAGRTLADYNIQKESTLHLVLR 96

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIP 99
             G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP
Sbjct: 97  LRGGMQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIP 137


>gi|380490173|emb|CCF36198.1| polyubiquitin, partial [Colletotrichum higginsianum]
          Length = 101

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/92 (41%), Positives = 57/92 (61%), Gaps = 2/92 (2%)

Query: 192 KTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQA 249
           +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  
Sbjct: 2   RTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIP 61

Query: 250 PDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 62  PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 93



 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 4/93 (4%)

Query: 43  TVIDYGIPNNSVIH---NDSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIP 99
           T+ DY I   S +H      G M+++ KT +  KT  L+   SDTI+N+K  I+ +EGIP
Sbjct: 3   TLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIP 61

Query: 100 VHEYDIYYGGKLIESYITLDVLNINNEDTLQMI 132
             +  + + GK +E   TL   NI  E TL ++
Sbjct: 62  PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 94



 Score = 45.8 bits (107), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 30/93 (32%), Positives = 53/93 (56%), Gaps = 2/93 (2%)

Query: 117 TLDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIP 175
           TL   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP
Sbjct: 3   TLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD-KEGIP 61

Query: 176 SEDCELFRGGEQLQNLKTLAYYDIKENEVLQII 208
            +   L   G+QL++ +TL+ Y+I++   L ++
Sbjct: 62  PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 94



 Score = 38.5 bits (88), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 21/56 (37%), Positives = 34/56 (60%), Gaps = 2/56 (3%)

Query: 1  MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH 56
          ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H
Sbjct: 39 LEVESSDTIDNVKSKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 92


>gi|159488830|ref|XP_001702404.1| bi-ubiquitin [Chlamydomonas reinhardtii]
 gi|158269430|gb|EDO95871.1| bi-ubiquitin [Chlamydomonas reinhardtii]
          Length = 244

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 55/158 (34%), Positives = 82/158 (51%), Gaps = 15/158 (9%)

Query: 138 LQEIFVQTPTS-TVKLE-VRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLA 195
           L+ ++V+T T  T+ L+ V     V D+K M++ +   IP ++  L   G QL++  TLA
Sbjct: 86  LRPLYVKTLTGKTITLQDVHSDLDVYDLKCMIDELE-GIPPDEQRLVFAGRQLEDADTLA 144

Query: 196 YYDIKENEVLQIIRHVKHS-----------IFVKLLNGRYIILEVAKFD-TVRDVKDKLF 243
            Y+I +   L +I  + H            ++VK L G+ I L+    D  V D+K  + 
Sbjct: 145 SYNISKESTLHLILRLGHPGVAIQSVVLRPLYVKTLTGKTITLQDVHSDLDVYDLKCMID 204

Query: 244 REIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
              G  PD QRLVF  +QLED   LASY I  ES ++L
Sbjct: 205 ELEGIPPDEQRLVFAGRQLEDADTLASYNISKESTLHL 242



 Score = 57.0 bits (136), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 56/172 (32%), Positives = 90/172 (52%), Gaps = 17/172 (9%)

Query: 50  PNNSVIHNDSGVMK-LYFKTPSNEKTFELKANRSD-TIENIKFIIEVREGIPVHEYDIYY 107
           PN+S   + S V++ LY KT +  KT  L+   SD  + ++K +I+  EGIP  E  + +
Sbjct: 76  PNSS--GSQSVVLRPLYVKTLTG-KTITLQDVHSDLDVYDLKCMIDELEGIPPDEQRLVF 132

Query: 108 GGKLIESYITLDVLNINNEDTLQMI---SVPK------ELQEIFVQTPTS-TVKLE-VRR 156
            G+ +E   TL   NI+ E TL +I     P        L+ ++V+T T  T+ L+ V  
Sbjct: 133 AGRQLEDADTLASYNISKESTLHLILRLGHPGVAIQSVVLRPLYVKTLTGKTITLQDVHS 192

Query: 157 AHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQII 208
              V D+K M++ +   IP ++  L   G QL++  TLA Y+I +   L +I
Sbjct: 193 DLDVYDLKCMIDELE-GIPPDEQRLVFAGRQLEDADTLASYNISKESTLHLI 243



 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/124 (33%), Positives = 60/124 (48%), Gaps = 14/124 (11%)

Query: 22  EEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH-----NDSGVM-------KLYFKTP 69
           E I  D   L +AG+QLE+  T+  Y I   S +H        GV         LY KT 
Sbjct: 121 EGIPPDEQRLVFAGRQLEDADTLASYNISKESTLHLILRLGHPGVAIQSVVLRPLYVKTL 180

Query: 70  SNEKTFELKANRSD-TIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDT 128
           +  KT  L+   SD  + ++K +I+  EGIP  E  + + G+ +E   TL   NI+ E T
Sbjct: 181 TG-KTITLQDVHSDLDVYDLKCMIDELEGIPPDEQRLVFAGRQLEDADTLASYNISKEST 239

Query: 129 LQMI 132
           L +I
Sbjct: 240 LHLI 243



 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 31/72 (43%), Positives = 40/72 (55%), Gaps = 1/72 (1%)

Query: 211 VKHSIFVKLLNGRYIILEVAKFD-TVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLA 269
           V   ++VK L G+ I L+    D  V D+K  +    G  PD QRLVF  +QLED   LA
Sbjct: 85  VLRPLYVKTLTGKTITLQDVHSDLDVYDLKCMIDELEGIPPDEQRLVFAGRQLEDADTLA 144

Query: 270 SYKIVNESIVNL 281
           SY I  ES ++L
Sbjct: 145 SYNISKESTLHL 156


>gi|339261298|ref|XP_003367976.1| putative ubiquitin family protein [Trichinella spiralis]
 gi|316955939|gb|EFV46696.1| putative ubiquitin family protein [Trichinella spiralis]
          Length = 129

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/98 (38%), Positives = 60/98 (61%), Gaps = 2/98 (2%)

Query: 185 GEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKL 242
           G+QL++ + L+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+
Sbjct: 8   GKQLEDGRRLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKSKI 67

Query: 243 FREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVN 280
             + G  PD QRL+F  +QLED   L+ Y I  ES ++
Sbjct: 68  QDKEGIPPDQQRLIFAGKQLEDGGALSDYNIQKESTLH 105



 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/104 (36%), Positives = 56/104 (53%), Gaps = 4/104 (3%)

Query: 32  FYAGQQLENGLTVIDYGIPNNSVIH---NDSGVMKLYFKTPSNEKTFELKANRSDTIENI 88
           +  G+QLE+G  + DY I   S +H      G M+++ KT +  KT  L+   SDTIEN+
Sbjct: 5   YGLGKQLEDGRRLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG-KTITLEVEPSDTIENV 63

Query: 89  KFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMI 132
           K  I+ +EGIP  +  + + GK +E    L   NI  E TL  +
Sbjct: 64  KSKIQDKEGIPPDQQRLIFAGKQLEDGGALSDYNIQKESTLHAV 107



 Score = 44.7 bits (104), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 37/126 (29%), Positives = 63/126 (50%), Gaps = 4/126 (3%)

Query: 103 YDIYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVL 161
           Y  Y  GK +E    L   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ 
Sbjct: 2   YWCYGLGKQLEDGRRLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE 61

Query: 162 DVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSIFV--KL 219
           +VK  ++  +  IP +   L   G+QL++   L+ Y+I++   L  +  +   + +  K 
Sbjct: 62  NVKSKIQD-KEGIPPDQQRLIFAGKQLEDGGALSDYNIQKESTLHAVLPLSGGMQISGKP 120

Query: 220 LNGRYI 225
           L G+ I
Sbjct: 121 LTGKSI 126


>gi|7862066|gb|AAF70460.1|AF240445_1 polyubiquitin [Populus tremula x Populus tremuloides]
          Length = 154

 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 45/145 (31%), Positives = 83/145 (57%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  +  + +VK  ++  +  IP +   L   G+QL++ +TLA Y+
Sbjct: 2   QIFVKTLTGKTITLEVESSDAIDNVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    I VK L G+ I +++   DT+  +K+++  + G  P  QRL+
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPNDTIDRIKERVEEKEGIPPVQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           +  +QL DD+    Y I   S+++L
Sbjct: 121 YAGKQLGDDKTARDYNIEGGSVLHL 145



 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 46/156 (29%), Positives = 80/156 (51%), Gaps = 3/156 (1%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SD I+N+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDAIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTST-VKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +    I V+T T   +++++    T+  +K+ VE  +  IP     
Sbjct: 60  NIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPNDTIDRIKERVEE-KEGIPPVQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSIF 216
           L   G+QL + KT   Y+I+   VL ++  ++    
Sbjct: 119 LIYAGKQLGDDKTARDYNIEGGSVLHLVLALRGGCL 154



 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/137 (32%), Positives = 69/137 (50%), Gaps = 10/137 (7%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIHNDSG 60
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDAIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL--- 69

Query: 61  VMKLYFKTPSNEKTF-----ELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESY 115
           V++L   T    KT      E+    +DTI+ IK  +E +EGIP  +  + Y GK +   
Sbjct: 70  VLRLRGGTMIKVKTLTGKEIEIDIEPNDTIDRIKERVEEKEGIPPVQQRLIYAGKQLGDD 129

Query: 116 ITLDVLNINNEDTLQMI 132
            T    NI     L ++
Sbjct: 130 KTARDYNIEGGSVLHLV 146


>gi|118484809|gb|ABK94272.1| unknown [Populus trichocarpa]
          Length = 154

 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 46/145 (31%), Positives = 83/145 (57%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + T+ +VK  +   +  IP +   L   G+QL++ +TLA Y+
Sbjct: 2   QIFVKTLTGKTITLEVESSDTIDNVKAKILD-KEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    I VK L G+ I +++   DT+  +K+++  + G  P  QRL+
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPNDTIDRIKERVEEKEGIPPVQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           +  +QL DD+    Y I   S+++L
Sbjct: 121 YAGKQLGDDKTARDYNIEGGSVLHL 145



 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/156 (30%), Positives = 80/156 (51%), Gaps = 3/156 (1%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SDTI+N+K  I  +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDTIDNVKAKILDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTST-VKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +    I V+T T   +++++    T+  +K+ VE  +  IP     
Sbjct: 60  NIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPNDTIDRIKERVEE-KEGIPPVQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSIF 216
           L   G+QL + KT   Y+I+   VL ++  ++    
Sbjct: 119 LIYAGKQLGDDKTARDYNIEGGSVLHLVLALRGGCL 154



 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 44/137 (32%), Positives = 69/137 (50%), Gaps = 10/137 (7%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIHNDSG 60
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 15  LEVESSDTIDNVKAKILDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL--- 69

Query: 61  VMKLYFKTPSNEKTF-----ELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESY 115
           V++L   T    KT      E+    +DTI+ IK  +E +EGIP  +  + Y GK +   
Sbjct: 70  VLRLRGGTMIKVKTLTGKEIEIDIEPNDTIDRIKERVEEKEGIPPVQQRLIYAGKQLGDD 129

Query: 116 ITLDVLNINNEDTLQMI 132
            T    NI     L ++
Sbjct: 130 KTARDYNIEGGSVLHLV 146


>gi|342326368|gb|AEL23099.1| ubiquitin [Cherax quadricarinatus]
          Length = 99

 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 56/91 (61%), Gaps = 2/91 (2%)

Query: 193 TLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAP 250
           TL+ Y+I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  P
Sbjct: 1   TLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP 60

Query: 251 DSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           D QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 61  DQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 91



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 51/93 (54%), Gaps = 4/93 (4%)

Query: 43  TVIDYGIPNNSVIH---NDSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIP 99
           T+ DY I   S +H      G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP
Sbjct: 1   TLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIP 59

Query: 100 VHEYDIYYGGKLIESYITLDVLNINNEDTLQMI 132
             +  + + GK +E   TL   NI  E TL ++
Sbjct: 60  PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 92



 Score = 45.1 bits (105), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 30/93 (32%), Positives = 53/93 (56%), Gaps = 2/93 (2%)

Query: 117 TLDVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIP 175
           TL   NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP
Sbjct: 1   TLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIP 59

Query: 176 SEDCELFRGGEQLQNLKTLAYYDIKENEVLQII 208
            +   L   G+QL++ +TL+ Y+I++   L ++
Sbjct: 60  PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 92



 Score = 39.7 bits (91), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 22/56 (39%), Positives = 34/56 (60%), Gaps = 2/56 (3%)

Query: 1  MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH 56
          ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H
Sbjct: 37 LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 90


>gi|5523981|gb|AAD44043.1|AF104026_1 polyprotein [Bovine viral diarrhea virus 2]
          Length = 216

 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 38/96 (39%), Positives = 57/96 (59%), Gaps = 2/96 (2%)

Query: 188 LQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFRE 245
           L N ++L   +I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  +
Sbjct: 57  LTNARSLPRKNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK 116

Query: 246 IGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
            G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 117 EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 152



 Score = 51.2 bits (121), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 43/73 (58%), Gaps = 1/73 (1%)

Query: 60  GVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLD 119
           G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL 
Sbjct: 82  GGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLS 140

Query: 120 VLNINNEDTLQMI 132
             NI  E TL ++
Sbjct: 141 DYNIQKESTLHLV 153



 Score = 42.7 bits (99), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 51/88 (57%), Gaps = 2/88 (2%)

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   
Sbjct: 67  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQR 125

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQII 208
           L   G+QL++ +TL+ Y+I++   L ++
Sbjct: 126 LIFAGKQLEDGRTLSDYNIQKESTLHLV 153



 Score = 38.9 bits (89), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 22/56 (39%), Positives = 34/56 (60%), Gaps = 2/56 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH 56
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H
Sbjct: 98  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 151


>gi|390359723|ref|XP_003729551.1| PREDICTED: uncharacterized protein LOC100888317 [Strongylocentrotus
           purpuratus]
          Length = 1382

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 62/209 (29%), Positives = 105/209 (50%), Gaps = 5/209 (2%)

Query: 82  SDTIENIKFIIEVREGIPVHEYD-IYYGGKLIESYITLDVLNINNEDTLQMISVPKELQE 140
           SDT   +K  +E + GIP +E   I+ GG+L+    TL+ + I N  T+++    +   +
Sbjct: 62  SDTAFPLKRQVEKKLGIPPNEQRMIWGGGELLNGPTTLEDIGIGNLSTIELTIPLQGGMQ 121

Query: 141 IFVQT-PTSTVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDI 199
           I+V+     ++   VR + TV  +K+ V   +  IP+    L   G+QL+   TL  YDI
Sbjct: 122 IYVRNLEGKSLSFYVRLSDTVDALKQQVAD-KSGIPANVQRLIYQGKQLEGSTTLEKYDI 180

Query: 200 KENEVLQIIRHVKH--SIFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVF 257
           ++   +Q+    K    I+V  L G+ +   V   DTV  +K ++  + G   + QRL++
Sbjct: 181 EKGSNIQLTLPGKGGLQIYVHNLEGKSLSFYVRLSDTVDALKQQVADKSGIPANVQRLIY 240

Query: 258 KRQQLEDDRNLASYKIVNESIVNLTDLGM 286
           + +QLE    L  Y I   S + LT  G+
Sbjct: 241 QGKQLEGSTTLEKYDIEKGSNIQLTLPGL 269



 Score = 57.8 bits (138), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 51/182 (28%), Positives = 86/182 (47%), Gaps = 7/182 (3%)

Query: 31  LFYAGQQLENGLTVI-DYGIPNNSVIHND---SGVMKLYFKTPSNEKTFELKANRSDTIE 86
           + + G +L NG T + D GI N S I       G M++Y +     K+       SDT++
Sbjct: 85  MIWGGGELLNGPTTLEDIGIGNLSTIELTIPLQGGMQIYVRNLEG-KSLSFYVRLSDTVD 143

Query: 87  NIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEIFVQT- 145
            +K  +  + GIP +   + Y GK +E   TL+  +I     +Q+    K   +I+V   
Sbjct: 144 ALKQQVADKSGIPANVQRLIYQGKQLEGSTTLEKYDIEKGSNIQLTLPGKGGLQIYVHNL 203

Query: 146 PTSTVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVL 205
              ++   VR + TV  +K+ V   +  IP+    L   G+QL+   TL  YDI++   +
Sbjct: 204 EGKSLSFYVRLSDTVDALKQQVAD-KSGIPANVQRLIYQGKQLEGSTTLEKYDIEKGSNI 262

Query: 206 QI 207
           Q+
Sbjct: 263 QL 264



 Score = 50.1 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 63/289 (21%), Positives = 120/289 (41%), Gaps = 36/289 (12%)

Query: 3   VKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---NDS 59
           V+ ++ ++ LK ++  K    I  ++  L Y G+QLE   T+  Y I   S I       
Sbjct: 136 VRLSDTVDALKQQVADK--SGIPANVQRLIYQGKQLEGSTTLEKYDIEKGSNIQLTLPGK 193

Query: 60  GVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLD 119
           G +++Y       K+       SDT++ +K  +  + GIP +   + Y GK +E   TL+
Sbjct: 194 GGLQIYVHNLEG-KSLSFYVRLSDTVDALKQQVADKSGIPANVQRLIYQGKQLEGSTTLE 252

Query: 120 VLNINNEDTLQMISVPKELQEIF---VQTPTSTVKLEVRRAHTVLDVKKMVESMRICIPS 176
             +I     +Q+ ++P     I     Q  TS     +   +    +K ++E        
Sbjct: 253 KYDIEKGSNIQL-TLPGLTSNIRCCPCQNKTSIHSTGLNDPNQNYKLKCLLE-------- 303

Query: 177 EDCELFRGGEQLQNLKTL-AYYDIKENEVLQIIRHVKHSIFVKLLNGRYIILEVAKFDTV 235
                    EQ  N K + A +  +  + L        +I+V+   G+ +   V   DT 
Sbjct: 304 ---------EQAANTKQIEALFAEQATKTL--------TIWVRDRQGKTVTFNVRLSDTA 346

Query: 236 RDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNLTDL 284
             ++ +  ++ G     Q + +  +QL+  + L  Y ++NES + +  L
Sbjct: 347 DALRRQTEKKFGIPIHLQYMTWAGKQLKGSKTLEEYGMLNESTIKVERL 395



 Score = 47.4 bits (111), Expect = 0.008,   Method: Composition-based stats.
 Identities = 37/133 (27%), Positives = 63/133 (47%), Gaps = 2/133 (1%)

Query: 152 LEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHV 211
            +VR + T   +K+ VE      P+E   ++ GGE L    TL    I     +++   +
Sbjct: 57  FDVRLSDTAFPLKRQVEKKLGIPPNEQRMIWGGGELLNGPTTLEDIGIGNLSTIELTIPL 116

Query: 212 K--HSIFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLA 269
           +    I+V+ L G+ +   V   DTV  +K ++  + G   + QRL+++ +QLE    L 
Sbjct: 117 QGGMQIYVRNLEGKSLSFYVRLSDTVDALKQQVADKSGIPANVQRLIYQGKQLEGSTTLE 176

Query: 270 SYKIVNESIVNLT 282
            Y I   S + LT
Sbjct: 177 KYDIEKGSNIQLT 189



 Score = 47.0 bits (110), Expect = 0.011,   Method: Composition-based stats.
 Identities = 49/201 (24%), Positives = 85/201 (42%), Gaps = 11/201 (5%)

Query: 73  KTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMI 132
           KT       SDT + ++   E + GIP+H   + + GK ++   TL+   + NE T+++ 
Sbjct: 334 KTVTFNVRLSDTADALRRQTEKKFGIPIHLQYMTWAGKQLKGSKTLEEYGMLNESTIKVE 393

Query: 133 SVPKELQEIFVQTPTSTVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLK 192
            +   ++    Q  TS     +        +K ++E  +  I  +   LF   EQ     
Sbjct: 394 RLTANIKCCPCQKKTSIPSSGLNGPKQNYKLKCLLEE-QAAIMKKIEALF--AEQASATP 450

Query: 193 TLAYYDIKENEVLQIIRHVKHSIFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDS 252
                  +  E LQI        F++   G+  I  V   DT   +K  + ++ G  P+ 
Sbjct: 451 RQEQGTTEATETLQI--------FMRDCEGKSHIYNVRLSDTADALKRHVDKKTGIPPNL 502

Query: 253 QRLVFKRQQLEDDRNLASYKI 273
           QRL+++ +QLE    L  Y I
Sbjct: 503 QRLIYQGKQLEGSTTLEEYNI 523


>gi|440894648|gb|ELR47050.1| Polyubiquitin-C, partial [Bos grunniens mutus]
          Length = 101

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 38/95 (40%), Positives = 58/95 (61%), Gaps = 2/95 (2%)

Query: 174 IPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAK 231
           IP +   L   G+QL++ +TL+ Y+I++   L ++  ++    IFVK L G+ I LEV  
Sbjct: 7   IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEP 66

Query: 232 FDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDR 266
            DT+ +VK K+  + G  PD QRL+F  +QLED R
Sbjct: 67  SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 101



 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 38/96 (39%), Positives = 56/96 (58%), Gaps = 4/96 (4%)

Query: 21  EEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---NDSGVMKLYFKTPSNEKTFEL 77
           +E I  D   L +AG+QLE+G T+ DY I   S +H      G M+++ KT +  KT  L
Sbjct: 4   KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG-KTITL 62

Query: 78  KANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIE 113
           +   SDTIEN+K  I+ +EGIP  +  + + GK +E
Sbjct: 63  EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE 98



 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 55/100 (55%), Gaps = 2/100 (2%)

Query: 92  IEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMISVPKELQEIFVQTPTS-TV 150
           I+ +EGIP  +  + + GK +E   TL   NI  E TL ++   +   +IFV+T T  T+
Sbjct: 1   IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTI 60

Query: 151 KLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQN 190
            LEV  + T+ +VK  ++  +  IP +   L   G+QL++
Sbjct: 61  TLEVEPSDTIENVKAKIQD-KEGIPPDQQRLIFAGKQLED 99



 Score = 39.7 bits (91), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 18/35 (51%), Positives = 23/35 (65%)

Query: 247 GQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
           G  PD QRL+F  +QLED R L+ Y I  ES ++L
Sbjct: 6   GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 40


>gi|148905884|gb|ABR16104.1| unknown [Picea sitchensis]
 gi|224286933|gb|ACN41169.1| unknown [Picea sitchensis]
          Length = 153

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 43/145 (29%), Positives = 83/145 (57%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           +IFV+T T  T+ LEV  + ++ +VK  ++  +  IP +   L   G+QL + ++LA Y+
Sbjct: 2   QIFVKTLTGKTITLEVESSDSIENVKAKIQD-KEGIPPDQQRLIFAGKQLDDGRSLADYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    I VK L G+ I +++   DT+  +K+++  + G  P  QRL+
Sbjct: 61  IQKESSLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIERIKERVEEKEGIPPVQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           +  +Q+ DD+    Y I   S+++L
Sbjct: 121 YAGKQMNDDKTARDYNIEGGSVLHL 145



 Score = 58.5 bits (140), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 43/148 (29%), Positives = 79/148 (53%), Gaps = 3/148 (2%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+++ KT +  KT  L+   SD+IEN+K  I+ +EGIP  +  + + GK ++   +L   
Sbjct: 1   MQIFVKTLTG-KTITLEVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLDDGRSLADY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTST-VKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E +L ++   +    I V+T T   +++++    T+  +K+ VE  +  IP     
Sbjct: 60  NIQKESSLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIERIKERVEE-KEGIPPVQQR 118

Query: 181 LFRGGEQLQNLKTLAYYDIKENEVLQII 208
           L   G+Q+ + KT   Y+I+   VL ++
Sbjct: 119 LIYAGKQMNDDKTARDYNIEGGSVLHLV 146



 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/135 (31%), Positives = 68/135 (50%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QL++G ++ DY I   S +H    
Sbjct: 15  LEVESSDSIENVKAKIQDK--EGIPPDQQRLIFAGKQLDDGRSLADYNIQKESSLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G   +  KT +  K  E+    +DTIE IK  +E +EGIP  +  + Y GK +    T
Sbjct: 73  LRGGTMIKVKTLTG-KEIEIDIEPTDTIERIKERVEEKEGIPPVQQRLIYAGKQMNDDKT 131

Query: 118 LDVLNINNEDTLQMI 132
               NI     L ++
Sbjct: 132 ARDYNIEGGSVLHLV 146


>gi|324539232|gb|ADY49558.1| Polyubiquitin-C, partial [Ascaris suum]
          Length = 148

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 42/112 (37%), Positives = 67/112 (59%), Gaps = 6/112 (5%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ IE +K++I  K  E I  D   L +AG+QLE+G T++DY I   S +H    
Sbjct: 15  LEVEPSDTIENVKVKIQDK--EGIPPDQQRLIFAGKQLEDGRTLLDYNIQKESTLHLVLR 72

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGG 109
             G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + G
Sbjct: 73  LRGGMQIFVKTLTG-KTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAG 123



 Score = 67.8 bits (164), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 44/121 (36%), Positives = 72/121 (59%), Gaps = 4/121 (3%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           ++FV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TL  Y+
Sbjct: 2   QLFVKTLTGKTITLEVEPSDTIENVKVKIQD-KEGIPPDQQRLIFAGKQLEDGRTLLDYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  ++    IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 257 F 257
           F
Sbjct: 121 F 121



 Score = 63.5 bits (153), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 44/124 (35%), Positives = 68/124 (54%), Gaps = 2/124 (1%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M+L+ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL   
Sbjct: 1   MQLFVKTLTG-KTITLEVEPSDTIENVKVKIQDKEGIPPDQQRLIFAGKQLEDGRTLLDY 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCE 180
           NI  E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++      P +   
Sbjct: 60  NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRL 119

Query: 181 LFRG 184
           +F G
Sbjct: 120 IFAG 123



 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/67 (47%), Positives = 42/67 (62%)

Query: 215 IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIV 274
           +FVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+F  +QLED R L  Y I 
Sbjct: 3   LFVKTLTGKTITLEVEPSDTIENVKVKIQDKEGIPPDQQRLIFAGKQLEDGRTLLDYNIQ 62

Query: 275 NESIVNL 281
            ES ++L
Sbjct: 63  KESTLHL 69


>gi|442761305|gb|JAA72811.1| Putative ubiquitin/40s ribosomal protein s27a fusion, partial
           [Ixodes ricinus]
          Length = 157

 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 48/135 (35%), Positives = 76/135 (56%), Gaps = 4/135 (2%)

Query: 126 EDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRG 184
           E TL ++   +   +IFV+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   
Sbjct: 17  ESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD-KEGIPPDQQRLIFA 75

Query: 185 GEQLQNLKTLAYYDIKEN--EVLQIIRHVKHSIFVKLLNGRYIILEVAKFDTVRDVKDKL 242
           G+QL++ +TL+ Y+I++N          V+   FVK L G+ I LEV   DT+ +VK K+
Sbjct: 76  GKQLEDGRTLSDYNIQKNPPSTWCCGSAVECRFFVKTLTGKTITLEVEPSDTIENVKAKI 135

Query: 243 FREIGQAPDSQRLVF 257
             + G  PD QRL+F
Sbjct: 136 QDKEGIPPDQQRLIF 150



 Score = 64.3 bits (155), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 42/112 (37%), Positives = 61/112 (54%), Gaps = 4/112 (3%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNN--SVIHND 58
           ++V+ ++ IE +K +I  K  E I  D   L +AG+QLE+G T+ DY I  N  S     
Sbjct: 44  LEVEPSDTIENVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKNPPSTWCCG 101

Query: 59  SGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGK 110
           S V   +F      KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK
Sbjct: 102 SAVECRFFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGK 153



 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/59 (50%), Positives = 38/59 (64%)

Query: 215 IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKI 273
           IFVK L G+ I LEV   DT+ +VK K+  + G  PD QRL+F  +QLED R L+ Y I
Sbjct: 32  IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 90



 Score = 53.9 bits (128), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 41/129 (31%), Positives = 62/129 (48%), Gaps = 2/129 (1%)

Query: 60  GVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLD 119
           G M+++ KT +  KT  L+   SDTIEN+K  I+ +EGIP  +  + + GK +E   TL 
Sbjct: 28  GGMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLS 86

Query: 120 VLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSED 178
             NI                  FV+T T  T+ LEV  + T+ +VK  ++      P + 
Sbjct: 87  DYNIQKNPPSTWCCGSAVECRFFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQ 146

Query: 179 CELFRGGEQ 187
             +F G  Q
Sbjct: 147 RLIFAGKNQ 155


>gi|357151138|ref|XP_003575692.1| PREDICTED: LOW QUALITY PROTEIN: polyubiquitin 14-like [Brachypodium
           distachyon]
          Length = 274

 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 72/230 (31%), Positives = 118/230 (51%), Gaps = 23/230 (10%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           M +Y +  +  +T  L  +  DT++ +K  I+ +  +       + G +L +   TL   
Sbjct: 51  MYIYVQNQTG-RTICLTVHELDTLQTVKANIQEQHHLA------FNGVQLDKDNFTLADY 103

Query: 122 NINNEDTLQMISVPKELQEIFVQ--TPTSTVKLEVRRAHTVLD-VKKMVESMRICIPSED 178
           NI +  T  +    +E  +I+V      S++ LEV    T +D VK M+E        + 
Sbjct: 104 NIEHGSTRDL----QEKMQIYVMETLAGSSIALEVDSLDTTIDKVKSMIEDREGFPKGQQ 159

Query: 179 CELFRGGEQLQNLK-TLAYYDI-KENEVLQIIRHVK-----HSIFVKLLNGRYIILEVAK 231
           C +F G +QL++ + TLA ++I K++ +L ++R  +       IFVK L G+ I  EV  
Sbjct: 160 CLIF-GNKQLKDDELTLADHNICKDSTILLVLRLSRPRGRTMQIFVKDLYGKSIPFEVES 218

Query: 232 FDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
            DTV D+K K++ + G  P  Q LVF  +QLE +R LA YK   ES ++L
Sbjct: 219 SDTVDDIKMKIYEKDGIRPKQQCLVFAAKQLERNRTLADYK-TXESTLHL 267


>gi|357118730|ref|XP_003561103.1| PREDICTED: LOW QUALITY PROTEIN: polyubiquitin 3-like [Brachypodium
           distachyon]
          Length = 330

 Score = 67.8 bits (164), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 74/258 (28%), Positives = 121/258 (46%), Gaps = 36/258 (13%)

Query: 35  GQQLENGLTVIDYGIPNNSVIHNDSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEV 94
           G+QL++  T+ DYGI     IH +S  + L            L    SDTI ++K  I  
Sbjct: 58  GKQLDDRRTLADYGI-----IHGESTTLAL-----------ALDVQSSDTIRDVKAKIYH 101

Query: 95  R---EGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQM-ISVPKELQEIFVQTPTSTV 150
           +     +P  +  ++ G  + E   TL+   +  E  L + ++ P     +FV+ P+   
Sbjct: 102 KLPGNPVPSRQRLVFAGKMMEEDGRTLEEYGVKEESRLHLAVTRPPPPVGVFVRAPSGK- 160

Query: 151 KLEVRR---AHTVLDVK-KMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQ 206
           +L +R    + TV  VK K+ +  RI  P     +  GG+QL++  TLA  D   N  + 
Sbjct: 161 RLYLRELELSDTVWSVKEKISDEERI--PPGRLRVVYGGKQLEDGSTLA--DCNGNPAIN 216

Query: 207 I-IRHVKHSIFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRL--VFKRQQLE 263
               H+  S+    L     + ++ +FDTV +VK ++   +      QRL  VF  +QLE
Sbjct: 217 WPAGHLDESLTGTCLE----LDQLDEFDTVGNVKARIREHLDIPVRQQRLLVVFAGKQLE 272

Query: 264 DDRNLASYKIVNESIVNL 281
           D R LA + + NES ++L
Sbjct: 273 DGRTLADHNVSNESSISL 290



 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 53/215 (24%), Positives = 101/215 (46%), Gaps = 14/215 (6%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLE-NGLTVIDYGIPNNSVIH--- 56
           + V+ ++ I  +K +I+ K+    +     L +AG+ +E +G T+ +YG+   S +H   
Sbjct: 84  LDVQSSDTIRDVKAKIYHKLPGNPVPSRQRLVFAGKMMEEDGRTLEEYGVKEESRLHLAV 143

Query: 57  -NDSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESY 115
                 + ++ + PS ++ +  +   SDT+ ++K  I   E IP     + YGGK +E  
Sbjct: 144 TRPPPPVGVFVRAPSGKRLYLRELELSDTVWSVKEKISDEERIPPGRLRVVYGGKQLEDG 203

Query: 116 ITLDVLNINNEDTLQMISVPK-ELQEIFVQTPTSTVKLEVRRAHTVLDVKKMV-ESMRIC 173
            TL   N N       I+ P   L E    T     +L+     TV +VK  + E + I 
Sbjct: 204 STLADCNGN-----PAINWPAGHLDESLTGTCLELDQLD--EFDTVGNVKARIREHLDIP 256

Query: 174 IPSEDCELFRGGEQLQNLKTLAYYDIKENEVLQII 208
           +  +   +   G+QL++ +TLA +++     + +I
Sbjct: 257 VRQQRLLVVFAGKQLEDGRTLADHNVSNESSISLI 291



 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 59/214 (27%), Positives = 99/214 (46%), Gaps = 31/214 (14%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVL 121
           +++  KT S E T  +KAN SDTI  +K  I+               G+  ++   LD  
Sbjct: 19  IQVLVKTQSGE-TIPVKANPSDTIYAVKAKIQ---------------GQQCQA---LDGK 59

Query: 122 NINNEDTLQMISVPKELQEIFVQTPTSTVKLEVRRAHTVLDVKKMV--ESMRICIPSEDC 179
            +++  TL    +      I  ++ T  + L+V+ + T+ DVK  +  +     +PS   
Sbjct: 60  QLDDRRTLADYGI------IHGESTTLALALDVQSSDTIRDVKAKIYHKLPGNPVPSRQR 113

Query: 180 ELFRGGEQLQNLKTLAYYDIKENEVLQ--IIRHVKH-SIFVKLLNGRYIIL-EVAKFDTV 235
            +F G    ++ +TL  Y +KE   L   + R      +FV+  +G+ + L E+   DTV
Sbjct: 114 LVFAGKMMEEDGRTLEEYGVKEESRLHLAVTRPPPPVGVFVRAPSGKRLYLRELELSDTV 173

Query: 236 RDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLA 269
             VK+K+  E    P   R+V+  +QLED   LA
Sbjct: 174 WSVKEKISDEERIPPGRLRVVYGGKQLEDGSTLA 207


>gi|345788159|ref|XP_003433036.1| PREDICTED: polyubiquitin-B-like, partial [Canis lupus familiaris]
          Length = 109

 Score = 67.8 bits (164), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 39/99 (39%), Positives = 60/99 (60%), Gaps = 2/99 (2%)

Query: 185 GEQLQNLKTLAYYDIKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKL 242
           G+QL++  TL+YY+I++   L ++  ++    IF+K L  + IILEV   DT+ +VK K+
Sbjct: 3   GKQLEDGCTLSYYNIQKESTLHLVLRLRDGMQIFMKTLTSKIIILEVEPSDTIENVKAKI 62

Query: 243 FREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
             + G  PD QRL+F  +QLED   L+   I  ES + L
Sbjct: 63  QDKEGIPPDQQRLIFAGKQLEDGHTLSDDNIQKESTLYL 101



 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/105 (36%), Positives = 58/105 (55%), Gaps = 8/105 (7%)

Query: 33  YAGQQLENGLTVIDYGIPNNSVIH-----NDSGVMKLYFKTPSNEKTFELKANRSDTIEN 87
           + G+QLE+G T+  Y I   S +H      D   M+++ KT ++ K   L+   SDTIEN
Sbjct: 1   FVGKQLEDGCTLSYYNIQKESTLHLVLRLRDG--MQIFMKTLTS-KIIILEVEPSDTIEN 57

Query: 88  IKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMI 132
           +K  I+ +EGIP  +  + + GK +E   TL   NI  E TL ++
Sbjct: 58  VKAKIQDKEGIPPDQQRLIFAGKQLEDGHTLSDDNIQKESTLYLV 102


>gi|346466265|gb|AEO32977.1| hypothetical protein [Amblyomma maculatum]
          Length = 168

 Score = 67.8 bits (164), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 44/143 (30%), Positives = 81/143 (56%), Gaps = 4/143 (2%)

Query: 142 FVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIK 200
            V+T T  T+ LEV  + T+ +VK  ++  +  IP +   L   G+QL++ +TLA Y+I+
Sbjct: 19  IVKTLTGKTITLEVESSDTIDNVKAKIQD-KEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 77

Query: 201 ENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFK 258
           +   L ++  ++    I VK L G+ I +++   DT+  +K+++  + G  P  QRL++ 
Sbjct: 78  KESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYA 137

Query: 259 RQQLEDDRNLASYKIVNESIVNL 281
            +QL DD+    Y I   S+++L
Sbjct: 138 GKQLADDKTAKEYNIEGGSVLHL 160



 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/137 (32%), Positives = 72/137 (52%), Gaps = 2/137 (1%)

Query: 73  KTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMI 132
           KT  L+   SDTI+N+K  I+ +EGIP  +  + + GK +E   TL   NI  E TL ++
Sbjct: 26  KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 85

Query: 133 SVPKELQEIFVQTPTST-VKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNL 191
              +    I V+T T   +++++    T+  +K+ VE  +  IP     L   G+QL + 
Sbjct: 86  LRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEE-KEGIPPVQQRLIYAGKQLADD 144

Query: 192 KTLAYYDIKENEVLQII 208
           KT   Y+I+   VL ++
Sbjct: 145 KTAKEYNIEGGSVLHLV 161



 Score = 57.8 bits (138), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 43/135 (31%), Positives = 68/135 (50%), Gaps = 6/135 (4%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIH---N 57
           ++V+ ++ I+ +K +I  K  E I  D   L +AG+QLE+G T+ DY I   S +H    
Sbjct: 30  LEVESSDTIDNVKAKIQDK--EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 87

Query: 58  DSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYIT 117
             G   +  KT +  K  E+    +DTI+ IK  +E +EGIP  +  + Y GK +    T
Sbjct: 88  LRGGTMIKVKTLTG-KEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKT 146

Query: 118 LDVLNINNEDTLQMI 132
               NI     L ++
Sbjct: 147 AKEYNIEGGSVLHLV 161


>gi|196011321|ref|XP_002115524.1| hypothetical protein TRIADDRAFT_29688 [Trichoplax adhaerens]
 gi|190581812|gb|EDV21887.1| hypothetical protein TRIADDRAFT_29688 [Trichoplax adhaerens]
          Length = 384

 Score = 67.8 bits (164), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 69/258 (26%), Positives = 126/258 (48%), Gaps = 11/258 (4%)

Query: 31  LFYAGQQLENGLTVIDYGIPNNSVIHNDSGVMKLYFKTP-----SNEKTFELKANRSDTI 85
           L  A +QL++  T+  YG+  N  I   + V+KL  + P     +++KT  ++   + T+
Sbjct: 119 LLLANKQLKDTETLRCYGMQENDTI---NMVLKLPRRIPLHIKMNHDKTITIEIESNSTV 175

Query: 86  ENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMISVPKEL-QEIFVQ 144
            +IK ++ +   +P ++  + Y GK++    T+D   + N DT+ MI   K   Q + VQ
Sbjct: 176 ADIKEVVFINNNMPPNKQRLTYNGKVMLDSTTVDDYGLKNYDTIYMIHRRKSRNQAVIVQ 235

Query: 145 TPT-STVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYDIKENE 203
                T+ +  +   T+ ++K ++E  +  IP     L      L N  TLA   ++   
Sbjct: 236 MENDQTLSVPAKEDSTIQEIKHLIEE-QTNIPWRQQRLLHDDVLLNNSSTLADCQLQLPC 294

Query: 204 VLQIIRHVKHSIFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLE 263
            LQ+       I+++L  G+ + LEV + D + D+K ++  + G +   Q L FK + L+
Sbjct: 295 QLQLFSSDILQIYIRLSVGKQLSLEVLEMDKIYDIKGRIEDKEGISILQQTLRFKGKILK 354

Query: 264 DDRNLASYKIVNESIVNL 281
           D   L S  I + SI+ L
Sbjct: 355 DQTTLKSCDIGSGSILQL 372



 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 43/65 (66%)

Query: 215 IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIV 274
           + VK  +G  ++L+    DTVRD+K+KL+  +   P  QRL+++ +QL+D++ L SY I 
Sbjct: 3   VVVKSQSGNLLLLQGEANDTVRDLKEKLYYHVHNPPSQQRLIYRGKQLDDEKLLTSYSIA 62

Query: 275 NESIV 279
           N +++
Sbjct: 63  NNALI 67



 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/204 (23%), Positives = 96/204 (47%), Gaps = 8/204 (3%)

Query: 77  LKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNEDTLQMISVPK 136
           L+   +DT+ ++K  +      P  +  + Y GK ++    L   +I N   ++ + V K
Sbjct: 15  LQGEANDTVRDLKEKLYYHVHNPPSQQRLIYRGKQLDDEKLLTSYSIANNALIRYLPVSK 74

Query: 137 ELQEIFVQTPTST---VKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKT 193
           E  EI +     T   + L V    ++  VK+++   +  IP E   L    +QL++ +T
Sbjct: 75  E--EIRLNCNLFTGQFLSLNVELDQSICHVKELLHQ-QTNIPMEKQRLLLANKQLKDTET 131

Query: 194 LAYYDIKENEVLQIIRHVKHSI--FVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPD 251
           L  Y ++EN+ + ++  +   I   +K+ + + I +E+    TV D+K+ +F      P+
Sbjct: 132 LRCYGMQENDTINMVLKLPRRIPLHIKMNHDKTITIEIESNSTVADIKEVVFINNNMPPN 191

Query: 252 SQRLVFKRQQLEDDRNLASYKIVN 275
            QRL +  + + D   +  Y + N
Sbjct: 192 KQRLTYNGKVMLDSTTVDDYGLKN 215



 Score = 40.8 bits (94), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 55/267 (20%), Positives = 114/267 (42%), Gaps = 15/267 (5%)

Query: 10  EKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIHNDSGVMKLYFKTP 69
           EKL   +H    ++       L Y G+QL++   +  Y I NN++I     V K   +  
Sbjct: 28  EKLYYHVHNPPSQQ------RLIYRGKQLDDEKLLTSYSIANNALIRY-LPVSKEEIRLN 80

Query: 70  SNEKT---FELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDVLNINNE 126
            N  T     L      +I ++K ++  +  IP+ +  +    K ++   TL    +   
Sbjct: 81  CNLFTGQFLSLNVELDQSICHVKELLHQQTNIPMEKQRLLLANKQLKDTETLRCYGMQEN 140

Query: 127 DTLQMI-SVPKELQEIFVQTPTSTVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGG 185
           DT+ M+  +P+ +          T+ +E+    TV D+K++V  +   +P     L   G
Sbjct: 141 DTINMVLKLPRRIPLHIKMNHDKTITIEIESNSTVADIKEVV-FINNNMPPNKQRLTYNG 199

Query: 186 EQLQNLKTLAYYDIKENEVLQIIRHVK---HSIFVKLLNGRYIILEVAKFDTVRDVKDKL 242
           + + +  T+  Y +K  + + +I   K    ++ V++ N + + +   +  T++++K  +
Sbjct: 200 KVMLDSTTVDDYGLKNYDTIYMIHRRKSRNQAVIVQMENDQTLSVPAKEDSTIQEIKHLI 259

Query: 243 FREIGQAPDSQRLVFKRQQLEDDRNLA 269
             +       QRL+     L +   LA
Sbjct: 260 EEQTNIPWRQQRLLHDDVLLNNSSTLA 286



 Score = 38.9 bits (89), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 29/109 (26%), Positives = 54/109 (49%), Gaps = 3/109 (2%)

Query: 175 PSEDCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHSIFVK--LLNGRYIILEVAKF 232
           PS+   ++RG +QL + K L  Y I  N +++ +   K  I +   L  G+++ L V   
Sbjct: 38  PSQQRLIYRG-KQLDDEKLLTSYSIANNALIRYLPVSKEEIRLNCNLFTGQFLSLNVELD 96

Query: 233 DTVRDVKDKLFREIGQAPDSQRLVFKRQQLEDDRNLASYKIVNESIVNL 281
            ++  VK+ L ++     + QRL+   +QL+D   L  Y +     +N+
Sbjct: 97  QSICHVKELLHQQTNIPMEKQRLLLANKQLKDTETLRCYGMQENDTINM 145


>gi|413943514|gb|AFW76163.1| hypothetical protein ZEAMMB73_716174 [Zea mays]
          Length = 153

 Score = 67.8 bits (164), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 44/145 (30%), Positives = 82/145 (56%), Gaps = 4/145 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           ++F+ T T  T+ +EV  + T+ +VK  ++     +P     +F  G+QL++ KTLA Y+
Sbjct: 2   QLFILTLTGKTITVEVESSDTIDNVKAKIQDKEGILPDHQRLIF-AGKQLEDGKTLADYN 60

Query: 199 IKENEVLQIIRHVKHS--IFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLV 256
           I++   L ++  +K    I VK L G+ I +++   DT+  +K+++  + G  P  QRL+
Sbjct: 61  IQKESTLPLVLRLKGGTMIKVKTLTGKEIEIDIEPNDTIYRIKERVEEKEGIPPIQQRLI 120

Query: 257 FKRQQLEDDRNLASYKIVNESIVNL 281
           +  +QL DD+    Y I   S+++L
Sbjct: 121 YAGKQLADDKTAKDYNIEGGSVLHL 145



 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 48/149 (32%), Positives = 79/149 (53%), Gaps = 5/149 (3%)

Query: 62  MKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGI-PVHEYDIYYGGKLIESYITLDV 120
           M+L+  T +  KT  ++   SDTI+N+K  I+ +EGI P H+  + + GK +E   TL  
Sbjct: 1   MQLFILTLTG-KTITVEVESSDTIDNVKAKIQDKEGILPDHQR-LIFAGKQLEDGKTLAD 58

Query: 121 LNINNEDTLQMISVPKELQEIFVQTPTST-VKLEVRRAHTVLDVKKMVESMRICIPSEDC 179
            NI  E TL ++   K    I V+T T   +++++    T+  +K+ VE  +  IP    
Sbjct: 59  YNIQKESTLPLVLRLKGGTMIKVKTLTGKEIEIDIEPNDTIYRIKERVEE-KEGIPPIQQ 117

Query: 180 ELFRGGEQLQNLKTLAYYDIKENEVLQII 208
            L   G+QL + KT   Y+I+   VL ++
Sbjct: 118 RLIYAGKQLADDKTAKDYNIEGGSVLHLV 146



 Score = 53.9 bits (128), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 45/136 (33%), Positives = 69/136 (50%), Gaps = 8/136 (5%)

Query: 1   MKVKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNS----VIH 56
           ++V+ ++ I+ +K +I  K  E IL D   L +AG+QLE+G T+ DY I   S    V+ 
Sbjct: 15  VEVESSDTIDNVKAKIQDK--EGILPDHQRLIFAGKQLEDGKTLADYNIQKESTLPLVLR 72

Query: 57  NDSGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYI 116
              G M +  KT +  K  E+    +DTI  IK  +E +EGIP  +  + Y GK +    
Sbjct: 73  LKGGTM-IKVKTLTG-KEIEIDIEPNDTIYRIKERVEEKEGIPPIQQRLIYAGKQLADDK 130

Query: 117 TLDVLNINNEDTLQMI 132
           T    NI     L ++
Sbjct: 131 TAKDYNIEGGSVLHLV 146


>gi|443697127|gb|ELT97674.1| hypothetical protein CAPTEDRAFT_147724 [Capitella teleta]
          Length = 180

 Score = 67.8 bits (164), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 45/133 (33%), Positives = 74/133 (55%), Gaps = 5/133 (3%)

Query: 3   VKKTEKIEKLKLRIHAKVEEEILEDLPELFYAGQQLENGLTVIDYGIPNNSVIHN--DSG 60
           V+ +E IE +K +I+AK    +  +   + YAG+ L N LTV D+ I     I     S 
Sbjct: 26  VEGSETIESVKEKINAKDGTPV--ERQRVIYAGKLLRNDLTVDDFDIKRECNIQMLIFSQ 83

Query: 61  VMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITLDV 120
             +++ KT +  KT  +  +RS+TIE++K  I  ++G PV    + Y GK + + +T+D 
Sbjct: 84  SFQVFVKTCTG-KTITIDVDRSETIESVKEKINAKDGTPVQRQKLRYAGKFLRNDLTVDD 142

Query: 121 LNINNEDTLQMIS 133
            +I  E T+QM+S
Sbjct: 143 FDIKRECTIQMLS 155



 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/157 (29%), Positives = 86/157 (54%), Gaps = 4/157 (2%)

Query: 59  SGVMKLYFKTPSNEKTFELKANRSDTIENIKFIIEVREGIPVHEYDIYYGGKLIESYITL 118
           S   +++ KT +  KT  +    S+TIE++K  I  ++G PV    + Y GKL+ + +T+
Sbjct: 7   SQSFQVFVKTCTG-KTITIDVEGSETIESVKEKINAKDGTPVERQRVIYAGKLLRNDLTV 65

Query: 119 DVLNINNEDTLQMISVPKELQEIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSE 177
           D  +I  E  +QM+   +  Q +FV+T T  T+ ++V R+ T+  VK+ + + +   P +
Sbjct: 66  DDFDIKRECNIQMLIFSQSFQ-VFVKTCTGKTITIDVDRSETIESVKEKINA-KDGTPVQ 123

Query: 178 DCELFRGGEQLQNLKTLAYYDIKENEVLQIIRHVKHS 214
             +L   G+ L+N  T+  +DIK    +Q++  +  S
Sbjct: 124 RQKLRYAGKFLRNDLTVDDFDIKRECTIQMLSPLPPS 160



 Score = 46.2 bits (108), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 37/144 (25%), Positives = 74/144 (51%), Gaps = 3/144 (2%)

Query: 140 EIFVQTPTS-TVKLEVRRAHTVLDVKKMVESMRICIPSEDCELFRGGEQLQNLKTLAYYD 198
           ++FV+T T  T+ ++V  + T+  VK+ + + +   P E   +   G+ L+N  T+  +D
Sbjct: 11  QVFVKTCTGKTITIDVEGSETIESVKEKINA-KDGTPVERQRVIYAGKLLRNDLTVDDFD 69

Query: 199 IK-ENEVLQIIRHVKHSIFVKLLNGRYIILEVAKFDTVRDVKDKLFREIGQAPDSQRLVF 257
           IK E  +  +I      +FVK   G+ I ++V + +T+  VK+K+  + G     Q+L +
Sbjct: 70  IKRECNIQMLIFSQSFQVFVKTCTGKTITIDVDRSETIESVKEKINAKDGTPVQRQKLRY 129

Query: 258 KRQQLEDDRNLASYKIVNESIVNL 281
             + L +D  +  + I  E  + +
Sbjct: 130 AGKFLRNDLTVDDFDIKRECTIQM 153


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.318    0.138    0.377 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,220,018,468
Number of Sequences: 23463169
Number of extensions: 175816601
Number of successful extensions: 510077
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3074
Number of HSP's successfully gapped in prelim test: 360
Number of HSP's that attempted gapping in prelim test: 480908
Number of HSP's gapped (non-prelim): 14169
length of query: 286
length of database: 8,064,228,071
effective HSP length: 141
effective length of query: 145
effective length of database: 9,050,888,538
effective search space: 1312378838010
effective search space used: 1312378838010
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 76 (33.9 bits)