BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>023199
MKTLKMIDITARKENTCQVSYDLSSDYKEQLKTWIHLQVIELLLGHQANASQGLEVNAIN
HSGVTAFDLLLISPSEAGDREIEEILRSAGATGMRDDNQTSVDNLAVSSAETNPLRTKND
MTEFFKFKKGRDSPGETRSSLLVVAALVATTTFQFCVNPPGGTWQDNSTPSSKAHIAGES
IWGSTNTIAFCLYMFFNSLGFKLSLQMINILTTKFPLQFELQLCFLAMNFTYDTAVISIA
PDEVKLFVILTISILPLAIGLTAYCFRLQQKRQRTERTATVEPQNQ

High Scoring Gene Products

Symbol, full name Information P value
AT5G51160 protein from Arabidopsis thaliana 2.0e-47
AT5G15500 protein from Arabidopsis thaliana 0.00085

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  023199
        (286 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2176252 - symbol:AT5G51160 "AT5G51160" species...   496  2.0e-47   1
TAIR|locus:2180882 - symbol:AT5G15500 species:3702 "Arabi...   113  0.00085   1


>TAIR|locus:2176252 [details] [associations]
            symbol:AT5G51160 "AT5G51160" species:3702 "Arabidopsis
            thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0006826 "iron ion transport"
            evidence=RCA] [GO:0010043 "response to zinc ion" evidence=RCA]
            [GO:0010106 "cellular response to iron ion starvation"
            evidence=RCA] [GO:0010167 "response to nitrate" evidence=RCA]
            [GO:0015706 "nitrate transport" evidence=RCA] InterPro:IPR002110
            Pfam:PF00023 PROSITE:PS50088 SMART:SM00248 EMBL:CP002688
            GenomeReviews:BA000015_GR Gene3D:1.25.40.20 InterPro:IPR020683
            Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 HSSP:Q60778
            EMBL:AB023044 InterPro:IPR027001 PANTHER:PTHR24177
            InterPro:IPR027002 InterPro:IPR026961 PANTHER:PTHR24177:SF1
            Pfam:PF13962 UniGene:At.29692 EMBL:BT012354 EMBL:AK175167
            EMBL:AK221321 IPI:IPI00519098 RefSeq:NP_199929.1 UniGene:At.29693
            ProteinModelPortal:Q9LU58 SMR:Q9LU58 EnsemblPlants:AT5G51160.1
            GeneID:835190 KEGG:ath:AT5G51160 TAIR:At5g51160 eggNOG:NOG291916
            HOGENOM:HOG000153115 InParanoid:Q9LU58 OMA:NTTMASI PhylomeDB:Q9LU58
            ProtClustDB:CLSN2687220 ArrayExpress:Q9LU58 Genevestigator:Q9LU58
            Uniprot:Q9LU58
        Length = 442

 Score = 496 (179.7 bits), Expect = 2.0e-47, P = 2.0e-47
 Identities = 108/241 (44%), Positives = 154/241 (63%)

Query:    31 LKTWI-HLQVIELLLGHQANASQGLEVNAINHSGVTAFDLLLISPSEAGDREIEEILRSA 89
             L TW  + QVIE+L+      S+  EVNA+N  G++A DLL++ PSEAGDREI E L  A
Sbjct:   160 LATWRKNRQVIEVLVQAIPEESRSFEVNAMNKMGLSAMDLLVMFPSEAGDREIYEKLIEA 219

Query:    90 GATGMRDDNQTSVDNL-AVSSAETNPLRTKN--DMTEFFKFKKGRDSPGETRSSXXXXXX 146
             GA   RD   T+V+   + S+ +   +++++  ++ ++F FKK RDSP E RS+      
Sbjct:   220 GAQRGRDIGTTNVERTTSTSTCQERTMKSQSHKELVKYFTFKKHRDSPSEARSALLVVAS 279

Query:   147 XXXXXXFQFCVNPPGGTWQDNSTPS------------SKAHIAGESIWGSTNTIAFCLYM 194
                   FQ  + PPGGTWQD+S P+             +AH AG+SI G+ N +AF L++
Sbjct:   280 LVATATFQASLTPPGGTWQDSSIPAVSQNTTNVNTTNQQAHTAGQSIMGTFNGVAFTLFV 339

Query:   195 FFNSLGFKLSLQMINILTTKFPLQFELQLCFLAMNFTYDTAVISIAPDEVKLFVILTISI 254
             FFN++GF +SL M+NILT  FPL+F+LQ+C +AM F+++T + SIAPD VKL+ IL  SI
Sbjct:   340 FFNTIGFSVSLSMLNILTLGFPLRFQLQICMIAMYFSHNTTMASIAPDHVKLYCILITSI 399

Query:   255 L 255
             L
Sbjct:   400 L 400


>TAIR|locus:2180882 [details] [associations]
            symbol:AT5G15500 species:3702 "Arabidopsis thaliana"
            [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR002110
            PROSITE:PS50088 SMART:SM00248 EMBL:CP002688 Gene3D:1.25.40.20
            InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
            HSSP:P42773 EMBL:AL391143 InterPro:IPR026961 Pfam:PF13962
            HOGENOM:HOG000131606 EMBL:BT005379 EMBL:AK118435 IPI:IPI00539006
            PIR:T51528 RefSeq:NP_197054.1 UniGene:At.31790
            ProteinModelPortal:Q9LF32 SMR:Q9LF32 PRIDE:Q9LF32
            EnsemblPlants:AT5G15500.2 GeneID:831403 KEGG:ath:AT5G15500
            TAIR:At5g15500 InParanoid:Q9LF32 OMA:WISEERR PhylomeDB:Q9LF32
            ProtClustDB:CLSN2687470 Genevestigator:Q9LF32 Uniprot:Q9LF32
        Length = 457

 Score = 113 (44.8 bits), Expect = 0.00085, P = 0.00085
 Identities = 63/252 (25%), Positives = 108/252 (42%)

Query:    35 IHLQVIELLLGHQANASQGLEVNAINHSGVTAFDLLLISPSEAGDREIEEILRSAGATGM 94
             I+ Q ++LLL      S  + VN  N +G+T FD+ ++      +REIE +++  G  G 
Sbjct:   201 INRQAMKLLL-----ESSKINVNIENKNGLTVFDIAVLH----NNREIERMVKRHG--GK 249

Query:    95 RDDN----QTSVDNLAVSSAETNPLRTKNDMTEFFKFKKGRDSPGETRSSXXXXXXXXXX 150
             R  +    +T+ D LA   +     RTK     F+ +        E R++          
Sbjct:   250 RSVSLVKIKTTSDILASQLSWRESRRTKK--IRFYSWISE-----ERRNALLVVATLIVT 302

Query:   151 XXFQFCVNPPGGTWQDNSTPSSKAHIAGESIWGST--NTIAFCLYMFFNSLGFKLSLQM- 207
               +Q  + PPGG   D      K+  +G    GS   + + F     +NS GF  +++M 
Sbjct:   303 ATYQTVLQPPGGV-SDGG--GQKSGTSGPKA-GSVVMDEVYFIWLWLWNSAGFCFAIEMM 358

Query:   208 INILTTKFPLQFELQLCFLAMNFTYDTAVISIAPDEVKLFVILTI-SILPLAI-GLTAYC 265
             I +L+      F     F+ M   Y  A   I P+  + + I  + +I+ L I GL  + 
Sbjct:   359 IRLLSLGQESMFWYYPLFVPMVLAYSVAGDVIKPN-ARAYTIAGVGAIVVLIIWGLVVWF 417

Query:   266 FRLQQKRQRTER 277
             +   Q ++  +R
Sbjct:   418 WEWVQSKRTKQR 429


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.319   0.132   0.383    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      286       274   0.00078  115 3  11 22  0.48    33
                                                     33  0.40    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  605 (64 KB)
  Total size of DFA:  194 KB (2111 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  22.31u 0.14s 22.45t   Elapsed:  00:00:01
  Total cpu time:  22.31u 0.14s 22.45t   Elapsed:  00:00:01
  Start:  Sat May 11 16:23:03 2013   End:  Sat May 11 16:23:04 2013

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