Query 023201
Match_columns 286
No_of_seqs 162 out of 458
Neff 5.7
Searched_HMMs 29240
Date Mon Mar 25 18:04:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023201.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/023201hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1we1_A Heme oxygenase 1; oxido 100.0 2.5E-50 8.5E-55 366.1 19.3 202 74-285 1-207 (240)
2 2q32_A Heme oxygenase 2, HO-2; 100.0 6.3E-50 2.2E-54 368.3 20.1 218 58-285 6-238 (264)
3 1wzd_A Heme oxygenase; electro 100.0 4.5E-50 1.5E-54 357.8 16.1 203 73-285 3-212 (215)
4 1j02_A Heme oxygenase 1; alpha 100.0 2.3E-49 8E-54 365.1 20.3 206 70-285 5-218 (267)
5 1n45_A Heme oxygenase 1, HO-1; 100.0 2.6E-49 8.9E-54 357.6 20.1 204 72-285 7-218 (233)
6 1wov_A Heme oxygenase 2; HOMO 100.0 2E-49 7E-54 362.1 16.0 200 76-285 2-210 (250)
7 1sk7_A Hypothetical protein PA 100.0 1.5E-33 5.1E-38 248.7 15.9 182 75-285 11-197 (198)
8 1j77_A HEMO, heme oxygenase; p 100.0 3.4E-33 1.1E-37 248.6 16.4 181 75-285 8-192 (209)
9 3dde_A TENA/THI-4 protein, dom 99.8 3.7E-20 1.3E-24 165.9 11.6 195 78-285 6-218 (239)
10 2f2g_A SEED maturation protein 97.8 0.00021 7E-09 62.5 11.2 188 76-276 4-209 (221)
11 1rtw_A Transcriptional activat 97.7 0.001 3.5E-08 58.3 14.9 185 78-279 2-200 (220)
12 4fn6_A Thiaminase-2, thiaminas 97.6 0.00043 1.5E-08 61.2 10.8 177 77-269 2-200 (229)
13 3ibx_A TENA, HP1287, putative 97.5 0.00038 1.3E-08 61.2 9.6 176 77-269 6-203 (221)
14 2qcx_A Transcriptional activat 97.5 0.0004 1.4E-08 63.0 9.4 188 77-278 29-233 (263)
15 1z72_A Transcriptional regulat 97.5 0.00056 1.9E-08 60.0 9.9 185 72-273 10-211 (225)
16 1rcw_A CT610, CADD; iron, DI-i 97.4 0.00082 2.8E-08 58.5 9.9 189 77-284 7-218 (231)
17 3oql_A TENA homolog; transcrip 97.3 0.001 3.5E-08 60.7 9.7 190 77-282 20-242 (262)
18 3no6_A Transcriptional activat 97.1 0.0024 8.2E-08 57.4 9.8 178 76-269 20-219 (248)
19 3bjd_A Putative 3-oxoacyl-(acy 97.0 0.0047 1.6E-07 57.9 11.1 192 74-283 106-321 (332)
20 3mvu_A TENA family transcripti 96.8 0.0045 1.6E-07 54.5 8.8 177 76-267 7-206 (226)
21 2a2m_A Hypothetical protein BT 96.8 0.013 4.3E-07 53.0 11.6 170 72-259 44-226 (258)
22 1udd_A Transcriptional regulat 96.6 0.0053 1.8E-07 53.9 8.1 165 76-254 3-185 (226)
23 2qzc_A Transcriptional activat 96.4 0.0047 1.6E-07 53.7 6.2 123 77-207 6-138 (214)
24 3rm5_A Hydroxymethylpyrimidine 96.2 0.015 5.2E-07 57.7 9.6 180 74-268 328-530 (550)
25 2gm8_A TENA homolog/THI-4 thia 96.1 0.014 4.8E-07 51.0 7.5 166 76-254 9-192 (221)
26 3hlx_A Pyrroloquinoline-quinon 95.7 0.13 4.4E-06 46.7 12.4 192 73-282 7-223 (258)
27 1wwm_A Hypothetical protein TT 90.9 1.6 5.5E-05 36.9 10.0 156 78-262 4-170 (190)
28 3b5o_A CADD-like protein of un 84.3 2.9 9.9E-05 37.6 7.6 173 104-284 27-225 (244)
29 1u7k_A GAG polyprotein; capsid 38.2 32 0.0011 28.0 4.1 27 244-273 52-78 (131)
30 3mb2_B 4-oxalocrotonate tautom 26.5 53 0.0018 24.0 3.1 20 256-275 11-30 (72)
31 1l6x_B Minimized B-domain of p 20.5 1.6E+02 0.0055 18.4 4.0 26 244-271 6-31 (34)
No 1
>1we1_A Heme oxygenase 1; oxidoreductase; HET: HEM; 2.50A {Synechocystis SP} SCOP: a.132.1.1
Probab=100.00 E-value=2.5e-50 Score=366.06 Aligned_cols=202 Identities=17% Similarity=0.318 Sum_probs=192.5
Q ss_pred CchhHHHHHHHHHHHHhHHhhhhhcccccCCcccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHh-CCCCcccccccc
Q 023201 74 EAKGFVEEMRFVAMKLHTKEQAREGEKEVKEPEERPVTKWEPTVDGYLRFLVDSKLVYDTLEGIIEK-APFPSYAEFRNT 152 (286)
Q Consensus 74 ~~~~Ls~~LR~~Tr~~H~~a~a~~~ek~~~s~~~~~L~~g~~~~~~Y~~lL~~ly~VY~aLE~al~~-~~~p~l~~f~~p 152 (286)
|+.+|+++||++|++.|+++ |+ ++|+++++.|.++++.|+++|.++|+||.+||+++++ .+||.+++++.|
T Consensus 1 m~~~l~~~Lr~~T~~~H~~~-----e~---~~~~~~l~~g~~~~~~Y~~~L~~~y~vy~~LE~~~~~~~~~p~l~~~~~~ 72 (240)
T 1we1_A 1 MSVNLASQLREGTKKSHSMA-----EN---VGFVKCFLKGVVEKNSYRKLVGNLYFVYSAMEEEMAKFKDHPILSHIYFP 72 (240)
T ss_dssp -CCCHHHHHHHHTHHHHHHH-----HT---SHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTTSTTGGGGCCT
T ss_pred CChHHHHHHHHHHHHHHHHH-----HC---cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHhcccCchhHhhhhH
Confidence 45689999999999999999 88 8999999999999999999999999999999999999 689999999999
Q ss_pred ccccHHHHHHHHHHhhhcCC-CCCCCCCchhHHHHHHHHhhccCccchHhHHHHHHhhhchhhHHHHHHHHHHh-cCCCC
Q 023201 153 GLERSEKLAKDLEWFKEQGY-TIPEPSSPGISYVQYLEELSEKDPQAFICHFYNIYFAHSAGGRMIGKKVAEKI-LGGKE 230 (286)
Q Consensus 153 ~L~Rt~aL~~DL~~l~g~~w-~~~~p~pa~~~Yv~~I~~la~~~P~~LlAh~YvrYlGdlsGGQiI~~~la~~~-L~~~g 230 (286)
+|.|+++|++||++|+|.+| +.+.|+|++..||+||++++.++|.++|||+||+|+||+||||+|++.+.+.+ |+++|
T Consensus 73 el~R~~~L~~DL~~l~g~~~~~~~~p~~a~~~yv~~i~~i~~~~P~~llg~~Yv~y~g~lsGGq~i~~~~~~~l~L~~~g 152 (240)
T 1we1_A 73 ELNRKQSLEQDLQFYYGSNWRQEVKISAAGQAYVDRVRQVAATAPELLVAHSYTRYLGDLSGGQILKKIAQNAMNLHDGG 152 (240)
T ss_dssp TSCCHHHHHHHHHHHHCTTHHHHCCCCHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSSS
T ss_pred hhhhHHHHHHHHHHhcCCCccccCCCCHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCcCccc
Confidence 99999999999999999999 57899999999999999999999999999999999999999999999998888 88899
Q ss_pred cccccccC--ChhHHHHHHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 023201 231 LEFYKWDG--ELPKLLQNVRDKLNKVAESWTREEKNRCLEETELSFKHSGEILRLIL 285 (286)
Q Consensus 231 l~FY~F~g--d~~~~k~~yr~~Ld~l~~~l~~eek~~iI~EA~~aF~ln~~i~~ei~ 285 (286)
++||.|+| |.+.+|+.||+.||++ +||++++++||+||+.+|++|++||++|.
T Consensus 153 ~~fy~f~~~~d~~~~k~~fr~~Ld~l--~l~~~e~~~ii~eA~~aF~~n~~if~eL~ 207 (240)
T 1we1_A 153 TAFYEFADIDDEKAFKNTYRQAMNDL--PIDQATAERIVDEANDAFAMNMKMFNELE 207 (240)
T ss_dssp CGGGCCTTCSSHHHHHHHHHHHHHTC--CCCHHHHHHHHHHHHHHHHHHHHHHHHTH
T ss_pred chhcccCCcCCHHHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999998 7889999999999999 69999999999999999999999999984
No 2
>2q32_A Heme oxygenase 2, HO-2; structural genomics medical relevance, structural genomics community request, protein structure in PSI; HET: OXN; 2.40A {Homo sapiens} PDB: 2qpp_A* 2rgz_A*
Probab=100.00 E-value=6.3e-50 Score=368.35 Aligned_cols=218 Identities=20% Similarity=0.333 Sum_probs=192.5
Q ss_pred eeecccccCCCC-------CCCCCchhHHHHHHHHHHHHhHHhhhhhcccccCCcccccccCCCCCHHHHHHHHHHHHHH
Q 023201 58 VVSATTAEKPKK-------RYPGEAKGFVEEMRFVAMKLHTKEQAREGEKEVKEPEERPVTKWEPTVDGYLRFLVDSKLV 130 (286)
Q Consensus 58 ~~~~~~~~~~~~-------~~p~~~~~Ls~~LR~~Tr~~H~~a~a~~~ek~~~s~~~~~L~~g~~~~~~Y~~lL~~ly~V 130 (286)
=+|.+..|..++ .-++++.+|+++||++|++.|+++ |+ .+|+.+|++|.+++++|+++|.++|+|
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Lr~~T~~~H~~~-----e~---~~~~~~ll~g~~~~e~Y~~~L~~~y~v 77 (264)
T 2q32_A 6 ETSEGVDESEKKNSGALEKENQMRMADLSELLKEGTKEAHDRA-----EN---TQFVKDFLKGNIKKELFKLATTALYFT 77 (264)
T ss_dssp -----------------------CTTSHHHHHHHHSHHHHHHH-----HT---CHHHHHHHTTCCCHHHHHHHHHHHHHH
T ss_pred ccccccchhhhhccCCcccccCCCcccHHHHHHHHHHHHHHHH-----Hc---cHHHHHhhcCCCCHHHHHHHHHHHHHH
Confidence 345555554444 456778899999999999999999 88 899999999999999999999999999
Q ss_pred HHHHHHHHHh-CCCCcccccccc-ccccHHHHHHHHHHhhhcCC-CCCCCCCchhHHHHHHHHhhccCccchHhHHHHHH
Q 023201 131 YDTLEGIIEK-APFPSYAEFRNT-GLERSEKLAKDLEWFKEQGY-TIPEPSSPGISYVQYLEELSEKDPQAFICHFYNIY 207 (286)
Q Consensus 131 Y~aLE~al~~-~~~p~l~~f~~p-~L~Rt~aL~~DL~~l~g~~w-~~~~p~pa~~~Yv~~I~~la~~~P~~LlAh~YvrY 207 (286)
|.+||+++++ .+||.+++++.| +|.|+++|++||++|+|.+| +.+.|+|++..||+||+++++++|.++|||+||+|
T Consensus 78 y~~LE~~l~~~~~~p~l~~~~~~~el~R~~~L~~DL~~l~G~~w~~~~~p~~a~~~yv~~i~~ia~~~P~~llgh~Yv~y 157 (264)
T 2q32_A 78 YSALEEEMERNKDHPAFAPLYFPMELHRKEALTKDMEYFFGENWEEQVQAPKAAQKYVERIHYIGQNEPELLVAHAYTRY 157 (264)
T ss_dssp HHHHHHHHHHTTTCTTTGGGCCHHHHCCHHHHHHHHHHHHCTTGGGGCCCCHHHHHHHHHHHHHHHHCGGGHHHHHHHHH
T ss_pred HHHHHHHHHHcccChHhHhhcCHhhhhhHHHHHHHHHHhcCCCccccCCCChHHHHHHHHHHHHhccCHHHHHHHHHHHH
Confidence 9999999998 679999999999 69999999999999999999 58899999999999999999999999999999999
Q ss_pred hhhchhhHHHHHHHHHHh-cC--CCCcccccccC--ChhHHHHHHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 023201 208 FAHSAGGRMIGKKVAEKI-LG--GKELEFYKWDG--ELPKLLQNVRDKLNKVAESWTREEKNRCLEETELSFKHSGEILR 282 (286)
Q Consensus 208 lGdlsGGQiI~~~la~~~-L~--~~gl~FY~F~g--d~~~~k~~yr~~Ld~l~~~l~~eek~~iI~EA~~aF~ln~~i~~ 282 (286)
+|++||||+|++.+.+.+ |+ ++|++||.|+| |.+.+|+.||+.||++ +||++++++||+||+.+|++|++||+
T Consensus 158 ~g~lsGGqii~k~l~k~lgL~~~~~g~~Fy~f~g~~d~~~~k~~fr~~Ld~l--~ld~ee~~~iI~eA~~aF~ln~~if~ 235 (264)
T 2q32_A 158 MGDLSGGQVLKKVAQRALKLPSTGEGTQFYLFENVDNAQQFKQLYRARMNAL--DLNMKTKERIVEEANKAFEYNMQIFN 235 (264)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCTTCTTCGGGCCTTCSCHHHHHHHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhhHHHHHHHHHHhcCCCCCCccceeeccCCCCCHHHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999998888777 76 68999999998 7788999999999999 69999999999999999999999999
Q ss_pred HHh
Q 023201 283 LIL 285 (286)
Q Consensus 283 ei~ 285 (286)
+|.
T Consensus 236 eL~ 238 (264)
T 2q32_A 236 ELD 238 (264)
T ss_dssp HHH
T ss_pred HHH
Confidence 985
No 3
>1wzd_A Heme oxygenase; electron-transfer, artificial metalloprotein; HET: YOK; 1.35A {Corynebacterium diphtheriae} SCOP: a.132.1.1 PDB: 1iw1_A* 1v8x_A* 1iw0_A* 1wzf_A* 1wzg_A* 2z68_A* 3i8r_A* 3moo_A* 1wnw_A* 1wnx_A* 1wnv_A*
Probab=100.00 E-value=4.5e-50 Score=357.79 Aligned_cols=203 Identities=23% Similarity=0.372 Sum_probs=190.7
Q ss_pred CCchhHHHHHHHHHHHHhHHhhhhhcccccCCcccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHh-CCCCccccccc
Q 023201 73 GEAKGFVEEMRFVAMKLHTKEQAREGEKEVKEPEERPVTKWEPTVDGYLRFLVDSKLVYDTLEGIIEK-APFPSYAEFRN 151 (286)
Q Consensus 73 ~~~~~Ls~~LR~~Tr~~H~~a~a~~~ek~~~s~~~~~L~~g~~~~~~Y~~lL~~ly~VY~aLE~al~~-~~~p~l~~f~~ 151 (286)
+|+.+|+++||++|++.|+++ |+ ++++.++..|.++++.|+++|.++|+||.+||+++++ .++|.+++++.
T Consensus 3 ~~~~~l~~~Lr~~T~~~H~~~-----e~---~~~v~~l~~g~~~~~~Y~~~L~~~y~vy~~lE~~~~~~~~~p~~~~~~~ 74 (215)
T 1wzd_A 3 TATAGLAVELKQSTAQAHEKA-----EH---STFMSDLLKGRLGVAEFTRLQEQAWLFYTALEQAVDAVRASGFAESLLD 74 (215)
T ss_dssp ----CHHHHHHHHTHHHHHHH-----HT---CHHHHHHHTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSTTTSC
T ss_pred CccHHHHHHHHHHHHHHHHHH-----Hc---cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHcccCchhhhhcc
Confidence 467789999999999999999 88 8889999999999999999999999999999999998 56899999999
Q ss_pred cccccHHHHHHHHHHhhhcC-C-CCCCCCCchhHHHHHHHHhhccC-ccchHhHHHHHHhhhchhhHHHHHHHHHHh-cC
Q 023201 152 TGLERSEKLAKDLEWFKEQG-Y-TIPEPSSPGISYVQYLEELSEKD-PQAFICHFYNIYFAHSAGGRMIGKKVAEKI-LG 227 (286)
Q Consensus 152 p~L~Rt~aL~~DL~~l~g~~-w-~~~~p~pa~~~Yv~~I~~la~~~-P~~LlAh~YvrYlGdlsGGQiI~~~la~~~-L~ 227 (286)
|++.|+++|++||++|.|++ | +.+.|+|++..|+++|++++.++ |..+|||+||+|+|+++|||+|++++.+++ ++
T Consensus 75 ~el~R~~~l~~DL~~l~~~~~w~~~~~~~~a~~~yv~~i~~~~~~~~p~~~lg~~Yv~YeG~~~GGq~i~~~~~~~l~l~ 154 (215)
T 1wzd_A 75 PALNRAEVLARDLDKLNGSSEWRSRITASPAVIDYVNRLEEIRDNVDGPALVAHHYVRYLGDLSGGQVIARMMQRHYGVD 154 (215)
T ss_dssp GGGCCHHHHHHHHHHHHSSSTHHHHCCCCHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred chhccHHHHHHHHHHHcCCcchhhcCCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHhcCcC
Confidence 99999999999999999988 8 57899999999999999999889 999999999999999999999999998888 88
Q ss_pred CCCcccccccC--ChhHHHHHHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 023201 228 GKELEFYKWDG--ELPKLLQNVRDKLNKVAESWTREEKNRCLEETELSFKHSGEILRLIL 285 (286)
Q Consensus 228 ~~gl~FY~F~g--d~~~~k~~yr~~Ld~l~~~l~~eek~~iI~EA~~aF~ln~~i~~ei~ 285 (286)
++|++||.|+| +.+.+|+.||+.||++ +||++++++||+||+.+|++|++||++|.
T Consensus 155 ~~g~~f~~~~~~~~~~~~~~~fr~~Ld~~--~~~~~~~~~ii~eA~~aF~~~~~i~~el~ 212 (215)
T 1wzd_A 155 PEALGFYHFEGIAKLKVYKDEYREKLNNL--ELSDEQREHLLKEATDAFVFNHQVFADLG 212 (215)
T ss_dssp GGGCGGGCCTTCSCHHHHHHHHHHHHHTC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccceeeecCCcCCHHHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999998 7899999999999999 69999999999999999999999999985
No 4
>1j02_A Heme oxygenase 1; alpha helix, O2-analog bound form, oxidoreductase; HET: HEM; 1.70A {Rattus norvegicus} SCOP: a.132.1.1 PDB: 1irm_C 1dve_A* 1ix3_A* 1ivj_A* 1ix4_A* 1j2c_A* 1ubb_A* 1ulx_A* 1vgi_A* 2dy5_A* 2e7e_A* 2zvu_A* 1dvg_A* 3i9t_A* 3i9u_A*
Probab=100.00 E-value=2.3e-49 Score=365.15 Aligned_cols=206 Identities=22% Similarity=0.371 Sum_probs=191.2
Q ss_pred CCCCCchhHHHHHHHHHHHHhHHhhhhhcccccCCcccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHh-CCCCcccc
Q 023201 70 RYPGEAKGFVEEMRFVAMKLHTKEQAREGEKEVKEPEERPVTKWEPTVDGYLRFLVDSKLVYDTLEGIIEK-APFPSYAE 148 (286)
Q Consensus 70 ~~p~~~~~Ls~~LR~~Tr~~H~~a~a~~~ek~~~s~~~~~L~~g~~~~~~Y~~lL~~ly~VY~aLE~al~~-~~~p~l~~ 148 (286)
|...++.+|+++||++|++.|+++ |+ .+|+.+|+.|.+++++|+++|.++|+||.+||+++++ .+||.+++
T Consensus 5 ~~~~~~~~l~~~Lr~~T~~~H~~~-----E~---~~~~~~l~~g~vs~e~Y~~~L~~~y~vy~aLE~~l~~~~~~p~l~~ 76 (267)
T 1j02_A 5 QLDSMSQDLSEALKEATKEVHIRA-----EN---SEFMRNFQKGQVSREGFKLVMASLYHIYTALEEEIERNKQNPVYAP 76 (267)
T ss_dssp ------CCHHHHHHHHHHHHHHHH-----HT---SHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTTCTTTGG
T ss_pred CcCCCchHHHHHHHHHHHHHHHHH-----Hc---cHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHcccCcHHHH
Confidence 334577899999999999999999 88 8999999999999999999999999999999999998 67999999
Q ss_pred cccc-ccccHHHHHHHHHHhhhcCC-CCCCCCCchhHHHHHHHHhhccCccchHhHHHHHHhhhchhhHHHHHHHHHHh-
Q 023201 149 FRNT-GLERSEKLAKDLEWFKEQGY-TIPEPSSPGISYVQYLEELSEKDPQAFICHFYNIYFAHSAGGRMIGKKVAEKI- 225 (286)
Q Consensus 149 f~~p-~L~Rt~aL~~DL~~l~g~~w-~~~~p~pa~~~Yv~~I~~la~~~P~~LlAh~YvrYlGdlsGGQiI~~~la~~~- 225 (286)
+++| +|.|+++|++||++|+|.+| +.+.|+|++..||++|++++.++|.+||||+||+|+|++||||+|++.+.+.+
T Consensus 77 ~~~peel~R~~~L~~DL~~l~G~~w~~~~~p~~a~~~yv~~i~~ia~~~P~~llgh~Yv~y~g~lsGGqii~k~l~k~lg 156 (267)
T 1j02_A 77 LYFPEELHRRAALEQDMAFWYGPHWQEAIPYTPATQHYVKRLHEVGGTHPELLVAHAYTRYLGDLSGGQVLKKIAQKAMA 156 (267)
T ss_dssp GCCHHHHCCHHHHHHHHHHHHCTTGGGTSCCCHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHTTHHHHHHHHHHHHHT
T ss_pred hcCHhhhhhHHHHHHHHHHhcCCCccccCCCChHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 9999 79999999999999999999 58899999999999999999999999999999999999999999998888877
Q ss_pred cC--CCCcccccccC--ChhHHHHHHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 023201 226 LG--GKELEFYKWDG--ELPKLLQNVRDKLNKVAESWTREEKNRCLEETELSFKHSGEILRLIL 285 (286)
Q Consensus 226 L~--~~gl~FY~F~g--d~~~~k~~yr~~Ld~l~~~l~~eek~~iI~EA~~aF~ln~~i~~ei~ 285 (286)
|+ ++|++||.|+| |.+.+|+.||+.||++ +||++++++||+||+.+|++|++||++|.
T Consensus 157 L~~~~~gl~Fy~f~g~~d~~~~k~~fr~~Ld~l--~ld~ee~~~iI~eA~~aF~ln~~if~eL~ 218 (267)
T 1j02_A 157 LPSSGEGLAFFTFPSIDNPTKFKQLYRARMNTL--EMTPEVKHRVTEEAKTAFLLNIELFEELQ 218 (267)
T ss_dssp CCTTCTTCGGGCCTTCSCHHHHHHHHHHHHTTS--CCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCcceeeccCCcCCHHHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 76 58999999998 7889999999999999 59999999999999999999999999984
No 5
>1n45_A Heme oxygenase 1, HO-1; alpha helices, heme-binding site, oxidoreductase; HET: HEM; 1.50A {Homo sapiens} SCOP: a.132.1.1 PDB: 1n3u_A* 1ozr_A* 1ozw_A* 1s13_A* 1s8c_A* 1t5p_A* 1twn_A* 1twr_A* 3czy_A* 3hok_A* 3k4f_A* 3tgm_A* 1xjz_A* 1xk3_A* 1xk2_A* 1ozl_A* 1oyk_A* 1oze_A* 1oyl_A* 1xk0_A* ...
Probab=100.00 E-value=2.6e-49 Score=357.62 Aligned_cols=204 Identities=22% Similarity=0.376 Sum_probs=191.0
Q ss_pred CCCchhHHHHHHHHHHHHhHHhhhhhcccccCCcccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHh-CCCCcccccc
Q 023201 72 PGEAKGFVEEMRFVAMKLHTKEQAREGEKEVKEPEERPVTKWEPTVDGYLRFLVDSKLVYDTLEGIIEK-APFPSYAEFR 150 (286)
Q Consensus 72 p~~~~~Ls~~LR~~Tr~~H~~a~a~~~ek~~~s~~~~~L~~g~~~~~~Y~~lL~~ly~VY~aLE~al~~-~~~p~l~~f~ 150 (286)
..++.+|+++||++|++.|+++ |+ .+|+.+|.+|.+++++|+++|.++|+||.+||+++++ .+||.+++++
T Consensus 7 ~~~~~~l~~~Lr~~T~~~H~~~-----e~---~~~~~~l~~g~~~~~~Y~~~L~~~y~vy~~lE~~~~~~~~~p~~~~~~ 78 (233)
T 1n45_A 7 DSMPQDLSEALKEATKEVHTQA-----EN---AEFMRNFQKGQVTRDGFKLVMASLYHIYVALEEEIERNKESPVFAPVY 78 (233)
T ss_dssp ---CCSHHHHHHHHTHHHHHHH-----HH---SHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTTGGGC
T ss_pred CCCChHHHHHHHHHHHHHHHHH-----Hc---cHHHHHhhCCCCCHHHHHHHHHHHHHHHHHHHHHHHhcccCchhhhhc
Confidence 4577899999999999999999 88 8899999999999999999999999999999999998 7899999999
Q ss_pred cc-ccccHHHHHHHHHHhhhcCC-CCCCCCCchhHHHHHHHHhhccCccchHhHHHHHHhhhchhhHHHHHHHHHHh-cC
Q 023201 151 NT-GLERSEKLAKDLEWFKEQGY-TIPEPSSPGISYVQYLEELSEKDPQAFICHFYNIYFAHSAGGRMIGKKVAEKI-LG 227 (286)
Q Consensus 151 ~p-~L~Rt~aL~~DL~~l~g~~w-~~~~p~pa~~~Yv~~I~~la~~~P~~LlAh~YvrYlGdlsGGQiI~~~la~~~-L~ 227 (286)
.| +|.|+++|++||++|+|.+| +.+.|+|++..||++|++++.++|.+|+||+||+|+|+++|||+|++.+.+++ |+
T Consensus 79 ~~~el~R~~~L~~DL~~l~g~~~~~~~~~~~a~~~yv~~i~~i~~~~P~~l~ah~Yv~YeG~~~GGq~i~~~~~~~l~L~ 158 (233)
T 1n45_A 79 FPEELHRKAALEQDLAFWYGPRWQEVIPYTPAMQRYVKRLHEVGRTEPELLVAHAYTRYLGDLSGGQVLKKIAQKALDLP 158 (233)
T ss_dssp CHHHHCCHHHHHHHHHHHHCTTGGGTSCCCHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred CHhhcccHHHHHHHHHHhcCCCccccCCCChHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 99 79999999999999999899 58899999999999999999999999999999999999999999999998888 76
Q ss_pred --CCCcccccccC--ChhHHHHHHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 023201 228 --GKELEFYKWDG--ELPKLLQNVRDKLNKVAESWTREEKNRCLEETELSFKHSGEILRLIL 285 (286)
Q Consensus 228 --~~gl~FY~F~g--d~~~~k~~yr~~Ld~l~~~l~~eek~~iI~EA~~aF~ln~~i~~ei~ 285 (286)
++|++||.|+| +.+.+|..||+.||++ +||++++++||+||+.+|++|++||++|.
T Consensus 159 ~~~~g~~f~~f~~~~~~~~~k~~fr~~Ld~~--~l~~~e~~~ii~eA~~aF~~n~~i~~el~ 218 (233)
T 1n45_A 159 SSGEGLAFFTFPNIASATKFKQLYRSRMNSL--EMTPAVRQRVIEEAKTAFLLNIQLFEELQ 218 (233)
T ss_dssp SCSCSCGGGCCTTCSCHHHHHHHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCcceeeccCCcCCHHHHHHHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 58999999998 7788888899999999 59999999999999999999999999984
No 6
>1wov_A Heme oxygenase 2; HOMO dimer, oxidoreductase; HET: HEM; 1.75A {Synechocystis SP} SCOP: a.132.1.1 PDB: 1wow_A* 1wox_A*
Probab=100.00 E-value=2e-49 Score=362.12 Aligned_cols=200 Identities=21% Similarity=0.385 Sum_probs=190.4
Q ss_pred hhHHHHHHHHHHHHhHHhhhhhcccccCCcccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHh-CCCCcccccccccc
Q 023201 76 KGFVEEMRFVAMKLHTKEQAREGEKEVKEPEERPVTKWEPTVDGYLRFLVDSKLVYDTLEGIIEK-APFPSYAEFRNTGL 154 (286)
Q Consensus 76 ~~Ls~~LR~~Tr~~H~~a~a~~~ek~~~s~~~~~L~~g~~~~~~Y~~lL~~ly~VY~aLE~al~~-~~~p~l~~f~~p~L 154 (286)
.+|+++||++|++.|+++ |+ +++++++..|.+|++.|+++|.++|+||++||+++++ .++|.+++++.|+|
T Consensus 2 ~~l~~~Lr~~T~~~H~~~-----e~---~~~v~~l~~g~~~~~~Y~~~L~~~y~vy~~LE~~~~~~~~~p~l~~~~~~el 73 (250)
T 1wov_A 2 TNLAQKLRYGTQQSHTLA-----EN---TAYMKCFLKGIVEREPFRQLLANLYYLYSALEAALRQHRDNEIISAIYFPEL 73 (250)
T ss_dssp CCHHHHHHHHTHHHHHHH-----HT---SHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTTSHHHHHHCCGGG
T ss_pred chHHHHHHHHHHHHHHHH-----Hc---hHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHhccChhhhhhccHhh
Confidence 469999999999999999 88 8899999999999999999999999999999999998 67999999999999
Q ss_pred ccHHHHHHHHHHhhhcCC-CCCCCCCchhHHHHHHHHhhccCccchHhHHHHHHhhhchhhHHHHHHHHHHh-cC-CCCc
Q 023201 155 ERSEKLAKDLEWFKEQGY-TIPEPSSPGISYVQYLEELSEKDPQAFICHFYNIYFAHSAGGRMIGKKVAEKI-LG-GKEL 231 (286)
Q Consensus 155 ~Rt~aL~~DL~~l~g~~w-~~~~p~pa~~~Yv~~I~~la~~~P~~LlAh~YvrYlGdlsGGQiI~~~la~~~-L~-~~gl 231 (286)
.|+++|++||++|+|.+| +.++|+|++..||++|++++.++|.++|||+||+|+||+||||+|++.+.+.+ |+ ++|+
T Consensus 74 ~R~~~L~~DL~~l~g~~~~~~~~p~~a~~~yv~~i~~i~~~~P~~llgh~Yv~y~g~lsGGq~i~~~l~k~l~L~~~~g~ 153 (250)
T 1wov_A 74 NRTDKLAEDLTYYYGPNWQQIIQPTPCAKIYVDRLKTIAASEPELLIAHCYTRYLGDLSGGQSLKNIIRSALQLPEGEGT 153 (250)
T ss_dssp CCHHHHHHHHHHHHCTTHHHHCCCCHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHTTHHHHHHHHHHHHTTCCTTSSC
T ss_pred hhHHHHHHHHHHHcCCCccccCCCChHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCCCCcccc
Confidence 999999999999999999 58899999999999999999999999999999999999999999999888877 76 8999
Q ss_pred ccccccC-----ChhHHHHHHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 023201 232 EFYKWDG-----ELPKLLQNVRDKLNKVAESWTREEKNRCLEETELSFKHSGEILRLIL 285 (286)
Q Consensus 232 ~FY~F~g-----d~~~~k~~yr~~Ld~l~~~l~~eek~~iI~EA~~aF~ln~~i~~ei~ 285 (286)
+||.|+| |.+.+|+.||+.||++ +||++++++||+||+.+|++|++||++|.
T Consensus 154 ~fy~f~~~~~~~d~~~~k~~fr~~Ld~l--~l~~~e~~~ii~eA~~aF~ln~~if~eL~ 210 (250)
T 1wov_A 154 AMYEFDSLPTPGDRRQFKEIYRDVLNSL--PLDEATINRIVEEANYAFSLNREVMHDLE 210 (250)
T ss_dssp GGGCCTTCCSHHHHHHHHHHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHHHHTTH
T ss_pred eeeccCCccccccHHHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999998 5788999999999999 69999999999999999999999999874
No 7
>1sk7_A Hypothetical protein PA-HO; heme oxygenase, heme degradation, regioselectivity, oxidored; HET: HEM; 1.60A {Pseudomonas aeruginosa} SCOP: a.132.1.2
Probab=100.00 E-value=1.5e-33 Score=248.68 Aligned_cols=182 Identities=13% Similarity=0.109 Sum_probs=152.9
Q ss_pred chhHHHHHHHHHHHHhHHhhhhhcccccCCcccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHh-CCCCccccccccc
Q 023201 75 AKGFVEEMRFVAMKLHTKEQAREGEKEVKEPEERPVTKWEPTVDGYLRFLVDSKLVYDTLEGIIEK-APFPSYAEFRNTG 153 (286)
Q Consensus 75 ~~~Ls~~LR~~Tr~~H~~a~a~~~ek~~~s~~~~~L~~g~~~~~~Y~~lL~~ly~VY~aLE~al~~-~~~p~l~~f~~p~ 153 (286)
+.+|+++||++|++.|+++ |+ + ++. ++|.++++.|+++|.++|++|.++|.+++. ..+|.+. +.++
T Consensus 11 ~~~l~~~Lr~~T~~~H~~~-----e~---~-~~~--~~g~~~~~~Y~~~L~~~y~~y~~lE~~l~~~~~~~~~~--~~~e 77 (198)
T 1sk7_A 11 QNLRSQRLNLLTNEPHQRL-----ES---L-VKS--KEPFASRDNFARFVAAQYLFQHDLEPLYRNEALARLFP--GLAS 77 (198)
T ss_dssp -CCHHHHHHHHTHHHHHHH-----HH---H-HHH--HCTTSCHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHST--TGGG
T ss_pred chhHHHHHHHHHHHHHHHH-----HH---H-HHh--ccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcccccccC--chHh
Confidence 4579999999999999999 87 4 443 689999999999999999999999999987 4456654 3689
Q ss_pred cccHHHHHHHHHHhhhcCCC-CCCCCCchhHHHHHHHHhhccCccchHhHHHHHHhhhchhhHHHHHHHHHHh-cC-CCC
Q 023201 154 LERSEKLAKDLEWFKEQGYT-IPEPSSPGISYVQYLEELSEKDPQAFICHFYNIYFAHSAGGRMIGKKVAEKI-LG-GKE 230 (286)
Q Consensus 154 L~Rt~aL~~DL~~l~g~~w~-~~~p~pa~~~Yv~~I~~la~~~P~~LlAh~YvrYlGdlsGGQiI~~~la~~~-L~-~~g 230 (286)
+.|+++|++||++| |.+|. .+ +.|++ ...+|..++|+.||+ +||++|||+|++.+. ++ ++ ++|
T Consensus 78 ~~R~~~L~~DL~~l-g~~~~~~i-~~p~~----------~~~~~~~~lG~~YV~-eGs~lGGq~l~~~~~-~l~l~~~~g 143 (198)
T 1sk7_A 78 RARDDAARADLADL-GHPVPEGD-QSVRE----------ADLSLAEALGWLFVS-EGSKLGAAFLFKKAA-ALELDENFG 143 (198)
T ss_dssp GCCHHHHHHHHHHH-TCCCCCCC-CTTTT----------SCCCHHHHHHHHHHH-HHTTTTHHHHHHHHG-GGTCBTTBB
T ss_pred hhhHHHHHHHHHHh-CCCCcccC-CCccc----------ccCChHHHHHHHHHH-HHHHHHHHHHHHHHH-HcCCCcccc
Confidence 99999999999999 55684 43 45543 112556689999999 899999999987777 77 65 689
Q ss_pred cccccccC-ChhHHHHHHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 023201 231 LEFYKWDG-ELPKLLQNVRDKLNKVAESWTREEKNRCLEETELSFKHSGEILRLIL 285 (286)
Q Consensus 231 l~FY~F~g-d~~~~k~~yr~~Ld~l~~~l~~eek~~iI~EA~~aF~ln~~i~~ei~ 285 (286)
++||.|+| ....-|+.||+.||++ ++|++++++||+||+.+|.+|.+||+++.
T Consensus 144 ~~f~~~~~~~~~~~wk~f~~~Ld~l--~~d~~~~~~ii~~A~~aF~l~~~~l~~~~ 197 (198)
T 1sk7_A 144 ARHLAEPEGGRAQGWKSFVAILDGI--ELNEEEERLAAKGASDAFNRFGDLLERTF 197 (198)
T ss_dssp CGGGSCCTTCHHHHHHHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHhhCCCCccchHHHHHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999998 4445566899999999 69999999999999999999999999875
No 8
>1j77_A HEMO, heme oxygenase; proximal histidine, distal helix, oxidoreductase; HET: HEM; 1.50A {Neisseria meningitidis} SCOP: a.132.1.2 PDB: 1p3t_A* 1p3u_A* 1p3v_A*
Probab=100.00 E-value=3.4e-33 Score=248.61 Aligned_cols=181 Identities=14% Similarity=0.154 Sum_probs=152.8
Q ss_pred chhHHHHHHHHHHHHhHHhhhhhcccccCCcccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHh-CCCCccccccccc
Q 023201 75 AKGFVEEMRFVAMKLHTKEQAREGEKEVKEPEERPVTKWEPTVDGYLRFLVDSKLVYDTLEGIIEK-APFPSYAEFRNTG 153 (286)
Q Consensus 75 ~~~Ls~~LR~~Tr~~H~~a~a~~~ek~~~s~~~~~L~~g~~~~~~Y~~lL~~ly~VY~aLE~al~~-~~~p~l~~f~~p~ 153 (286)
+.+|+++||++|++.|+++ |+ + |+. .+|.++++.|+++|.++|+||.+||.+++. ..+|++. +.++
T Consensus 8 ~~~l~~~Lr~~T~~~H~~~-----E~---~-~~~--~~g~~~~~~Y~~~L~~~y~~y~~lE~~l~~~~~~~~~~--~~~e 74 (209)
T 1j77_A 8 ALTFAKRLKADTTAVHDSV-----DN---L-VMS--VQPFVSKENYIKFLKLQSVFHKAVDHIYKDAELNKAIP--ELEY 74 (209)
T ss_dssp CCSHHHHHHHHHHHHHHHH-----HH---H-HHH--TCTTSCHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHST--TGGG
T ss_pred CccHHHHHHHHHHHHHHHH-----HH---h-HHh--ccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcccCcccC--ChHh
Confidence 4579999999999999999 87 4 444 689999999999999999999999999987 4456654 3589
Q ss_pred cccHHHHHHHHHHhhhcCCCCCCCCCchhHHHHHHHHhhccCccchHhHHHHHHhhhchhhHHHHHHHHHHh-cC-CCCc
Q 023201 154 LERSEKLAKDLEWFKEQGYTIPEPSSPGISYVQYLEELSEKDPQAFICHFYNIYFAHSAGGRMIGKKVAEKI-LG-GKEL 231 (286)
Q Consensus 154 L~Rt~aL~~DL~~l~g~~w~~~~p~pa~~~Yv~~I~~la~~~P~~LlAh~YvrYlGdlsGGQiI~~~la~~~-L~-~~gl 231 (286)
+.|+++|++||++| |.+.+.+.+.++ + -+|..++|+.||+ +||++|||+|++.+. ++ ++ ++|+
T Consensus 75 ~~R~~~L~~DL~~l-G~~~~~v~~~~~------~------~~~~~~~G~~YV~-eGs~lGGq~l~k~~~-~l~l~~~~g~ 139 (209)
T 1j77_A 75 MARYDAVTQDLKDL-GEEPYKFDKELP------Y------EAGNKAIGWLYCA-EGSNLGAAFLFKHAQ-KLDYNGEHGA 139 (209)
T ss_dssp GCCHHHHHHHHHHT-TCCCCCCSSCCC------C------CCHHHHHHHHHHH-HHHHHTTHHHHHHHH-TTTCBTTBBC
T ss_pred hhhHHHHHHHHHHh-CCChhhccCCCC------C------CChHHHHHHHHHH-HHHHHHHHHHHHHHH-HcCCCcccch
Confidence 99999999999999 554433322111 1 1455688999999 899999999987776 77 65 6899
Q ss_pred ccccccC-ChhHHHHHHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 023201 232 EFYKWDG-ELPKLLQNVRDKLNKVAESWTREEKNRCLEETELSFKHSGEILRLIL 285 (286)
Q Consensus 232 ~FY~F~g-d~~~~k~~yr~~Ld~l~~~l~~eek~~iI~EA~~aF~ln~~i~~ei~ 285 (286)
+||.|+| .....|+.||+.||++ ++|++++++||+||+.+|.+|++||++|.
T Consensus 140 ~f~~~~~~~~~~~w~~fr~~Ld~l--~~d~~~~~~ii~~A~~aF~l~~~~f~~l~ 192 (209)
T 1j77_A 140 RHLAPHPDGRGKHWRAFVEHLNAL--NLTPEAEAEAIQGAREAFAFYKVVLRETF 192 (209)
T ss_dssp GGGSCCTTCHHHHHHHHHHHHHHT--CCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCCCcccHHHHHHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999998 6667799999999999 69999999999999999999999999974
No 9
>3dde_A TENA/THI-4 protein, domain of unknown function WI oxygenase-like fold; structural genomics, joint center for structural genomics; HET: MSE PGE; 2.30A {Shewanella denitrificans OS217}
Probab=99.82 E-value=3.7e-20 Score=165.92 Aligned_cols=195 Identities=12% Similarity=0.095 Sum_probs=160.6
Q ss_pred HHHHHHHHHHHHhHHhhhhhcccccCCcccccccCCCCCHHHHHHHHHHHHHHHHH----HHHHHHhC-CCC--c---cc
Q 023201 78 FVEEMRFVAMKLHTKEQAREGEKEVKEPEERPVTKWEPTVDGYLRFLVDSKLVYDT----LEGIIEKA-PFP--S---YA 147 (286)
Q Consensus 78 Ls~~LR~~Tr~~H~~a~a~~~ek~~~s~~~~~L~~g~~~~~~Y~~lL~~ly~VY~a----LE~al~~~-~~p--~---l~ 147 (286)
..++|++.+..+.+.. -++ +||+..|..|.++++.|+.+|.|.|+++.. ++.++.+. +.+ . +.
T Consensus 6 ~~~~L~~~~~~~w~~~-----~~h--~pFv~~l~~GtL~~~~f~~yl~Qdy~yl~~~~r~la~a~~ka~~~~~~~~~~~~ 78 (239)
T 3dde_A 6 DLTKLEQKVATMWDSI-----LTN--SPFIHEVLDGKATKALYAIYMTETYHYTKHNAKNQALVGIMGKDLPGKYLSFCF 78 (239)
T ss_dssp CHHHHHHHHHHHHHHH-----HHH--CHHHHHHHTTCCCHHHHHHHHHHHHHHHTTHHHHHHHHHHHCSSCCHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHH-----HcC--CHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHH
Confidence 3489999999999988 551 499999999999999999999999999865 66666664 334 2 33
Q ss_pred cccccccccHHHHHHHHHHhhhcCCC---CCCCCCchhHHHHHHHHhhc-cCccchHhHHHHHHhhh-chhhHHHHHHHH
Q 023201 148 EFRNTGLERSEKLAKDLEWFKEQGYT---IPEPSSPGISYVQYLEELSE-KDPQAFICHFYNIYFAH-SAGGRMIGKKVA 222 (286)
Q Consensus 148 ~f~~p~L~Rt~aL~~DL~~l~g~~w~---~~~p~pa~~~Yv~~I~~la~-~~P~~LlAh~YvrYlGd-lsGGQiI~~~la 222 (286)
.....++.+-..+.+|++.+ |.+++ ..+|+|+|.+|++++.+++. .+|..+|||+|+. +|. -+|||++ +.+.
T Consensus 79 ~~~~~e~~~e~~~~~~l~~~-G~~~~~~~~~~~~pat~aY~~~l~~~a~~~~~~~~la~~~~~-E~~y~~~~~~~-~~l~ 155 (239)
T 3dde_A 79 HHAHEEAGHELMALSDIASI-GFDREDVLSSKPLPATETLIAYLYWISATGNPVQRLGYSYWA-ENVYGYIDPVL-KAIQ 155 (239)
T ss_dssp HHHHHHTTTHHHHHHHHHHT-TCCHHHHHTCCCCHHHHHHHHHHHHHHHSSCGGGGHHHHHHH-HTCHHHHHHHH-HHHH
T ss_pred HHHHHHHChHHHHHHHHHHh-CCCHHHHHhCCCChHHHHHHHHHHHHHhCCCHHHHHHHHHHH-HHhhHHHHHHH-HHHH
Confidence 44456677777889998887 76663 56889999999999998875 6899999999973 222 3899986 7888
Q ss_pred HHh-cCCCCcccccccC--ChhHHHHHHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 023201 223 EKI-LGGKELEFYKWDG--ELPKLLQNVRDKLNKVAESWTREEKNRCLEETELSFKHSGEILRLIL 285 (286)
Q Consensus 223 ~~~-L~~~gl~FY~F~g--d~~~~k~~yr~~Ld~l~~~l~~eek~~iI~EA~~aF~ln~~i~~ei~ 285 (286)
+++ ++.++++||.+.+ |.+.+ +.|++.||.+ ..|++++++||++|+.+|++|.++|++|.
T Consensus 156 ~~~~l~~~~~~f~~~h~~~d~~h~-~~~~~~ld~~--~~~~~~~~~ii~~a~~~~~l~~~~f~~l~ 218 (239)
T 3dde_A 156 STLDLTPQSMKFFIAHSKIDAKHA-EEVNEMLHEV--CKTQEDVDSVVAVMENSLVLTARILDDVW 218 (239)
T ss_dssp HHTTCCGGGGHHHHHHHHHHHHHH-HHHHHHHHHH--CCSHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhCcCHHHHHHHHHHHhcchhHH-HHHHHHHHHH--cCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888 8878899999987 66665 5899999999 48999999999999999999999999874
No 10
>2f2g_A SEED maturation protein PM36 homolog; TENA_THI-4 domain, TENA/THI-4/PQQC family, AT3G16990, struct genomics, protein structure initiative; HET: HMH; 2.10A {Arabidopsis thaliana} SCOP: a.132.1.3 PDB: 2q4x_A*
Probab=97.76 E-value=0.00021 Score=62.54 Aligned_cols=188 Identities=11% Similarity=0.042 Sum_probs=113.6
Q ss_pred hhHHHHHHHHHHHHhHHhhhhhcccccCCcccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHh----CCCCc-----c
Q 023201 76 KGFVEEMRFVAMKLHTKEQAREGEKEVKEPEERPVTKWEPTVDGYLRFLVDSKLVYDTLEGIIEK----APFPS-----Y 146 (286)
Q Consensus 76 ~~Ls~~LR~~Tr~~H~~a~a~~~ek~~~s~~~~~L~~g~~~~~~Y~~lL~~ly~VY~aLE~al~~----~~~p~-----l 146 (286)
..|+++|++.+..+=.++ -+ .||+..+..|.++++.|+.+|.|=|+.-...=+++.. +.++. .
T Consensus 4 ~~f~~~L~~~~~~~~~~~-----~~---HpFv~~l~~GtL~~~~f~~yL~QDy~yl~~f~r~~a~~~~ka~~~~~~~~~~ 75 (221)
T 2f2g_A 4 RGVIDTWIDKHRSIYTAA-----TR---HAFVVSIRDGSVDLSSFRTWLGQDYLFVRRFVPFVASVLIRACKDSGESSDM 75 (221)
T ss_dssp -CHHHHHHHHTHHHHHHH-----TS---CSCCCEEETTEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSCTTHH
T ss_pred CcHHHHHHHhCHHHHHHH-----HC---CHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhHHHH
Confidence 359999999998877777 66 8999999999999999999999988776655555543 11111 1
Q ss_pred ccccc--cccccHHHHHHHHHHhhhcCCCCCCCCCchhHHHHHHHHh-hc-cCccchHhHHHHHHhhhchhhHHHHHHHH
Q 023201 147 AEFRN--TGLERSEKLAKDLEWFKEQGYTIPEPSSPGISYVQYLEEL-SE-KDPQAFICHFYNIYFAHSAGGRMIGKKVA 222 (286)
Q Consensus 147 ~~f~~--p~L~Rt~aL~~DL~~l~g~~w~~~~p~pa~~~Yv~~I~~l-a~-~~P~~LlAh~YvrYlGdlsGGQiI~~~la 222 (286)
..+.. .++..-..+-+++..-.|-+.+..+|.|+|.+|++++.++ +. .++..+++-.+.-+-+-.-=|+.+.+.+
T Consensus 76 ~~l~~~~~~~~~E~~~h~~~~~~~Gi~~~~~~~~p~~~aY~~~l~~~~~~~~~~~~~~aAl~pc~~~Y~~i~~~l~~~~- 154 (221)
T 2f2g_A 76 EVVLGGIASLNDEIEWFKREGSKWDVDFSTVVPQRANQEYGRFLEDLMSSEVKYPVIMTAFWAIEAVYQESFAHCLEDG- 154 (221)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCCCHHHHHHHHHHHHTTSTTSCHHHHHHHHHHHHHHHHHHTTTHHHHH-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCChhhcCCCHHHHHHHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHHHhcc-
Confidence 11100 0011111222222211232222468899999999999999 65 4677777776665433222233332211
Q ss_pred HHhcCCCCcccccc---cCCh--hHHHHHHHHHHHhhccCCCHHHHHHHHHHHHHHHHH
Q 023201 223 EKILGGKELEFYKW---DGEL--PKLLQNVRDKLNKVAESWTREEKNRCLEETELSFKH 276 (286)
Q Consensus 223 ~~~L~~~gl~FY~F---~gd~--~~~k~~yr~~Ld~l~~~l~~eek~~iI~EA~~aF~l 276 (286)
. .+. . .|..| +++. ...-+..++.+|++++..++++++++.+--..+-++
T Consensus 155 -~-~~~-~-~y~~Wi~~y~~~~f~~~v~~~~~~ld~~~~~~~~~~~~~~~~~f~~a~~l 209 (221)
T 2f2g_A 155 -N-KTP-V-ELTGACHRWGNDGFKQYCSSVKNIAERCLENASGEVLGEAEDVLVRVLEL 209 (221)
T ss_dssp -H-TSS-S-CCCHHHHHHSSHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHH
T ss_pred -C-CCC-c-HHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHH
Confidence 1 111 1 22222 2332 466778889999998778888887766555554444
No 11
>1rtw_A Transcriptional activator, putative; PF1337, TENA, thiamin, structural genomics, PSI, protein STR initiative; HET: MP5; 2.35A {Pyrococcus furiosus} SCOP: a.132.1.3
Probab=97.71 E-value=0.001 Score=58.28 Aligned_cols=185 Identities=18% Similarity=0.047 Sum_probs=114.4
Q ss_pred HHHHHHHHHHHHhHHhhhhhcccccCCcccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHh----CCCCcc---cccc
Q 023201 78 FVEEMRFVAMKLHTKEQAREGEKEVKEPEERPVTKWEPTVDGYLRFLVDSKLVYDTLEGIIEK----APFPSY---AEFR 150 (286)
Q Consensus 78 Ls~~LR~~Tr~~H~~a~a~~~ek~~~s~~~~~L~~g~~~~~~Y~~lL~~ly~VY~aLE~al~~----~~~p~l---~~f~ 150 (286)
|+++|++.+..+=.++ -+ .||+..+..|.++++.|+.+|.|=|..-...=+++.. +.++.- ..+.
T Consensus 2 f~~~L~~~~~~~w~~~-----~~---HPFv~~l~~GtL~~~~f~~YL~QDy~yl~~f~r~~a~~~~ka~~~~~~~~~~~l 73 (220)
T 1rtw_A 2 FSEELIKENENIWRRF-----LP---HKFLIEMAENTIKKENFEKWLVNDYYFVKNALRFMALLMAKAPDDLLPFFAESI 73 (220)
T ss_dssp HHHHHHHHSHHHHGGG-----TT---CHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCGGGHHHHHHHH
T ss_pred hHHHHHHcCHHHHHHH-----HC---ChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhHHHHHHH
Confidence 7889999888776666 56 8999999999999999999999988776666555544 222211 0000
Q ss_pred ccccccHHHHHHHHH---HhhhcCCCCCCCCCchhHHHHHHHHhhc-cCccchHhHHHHHHhhhchhhHHHHHHHHHHhc
Q 023201 151 NTGLERSEKLAKDLE---WFKEQGYTIPEPSSPGISYVQYLEELSE-KDPQAFICHFYNIYFAHSAGGRMIGKKVAEKIL 226 (286)
Q Consensus 151 ~p~L~Rt~aL~~DL~---~l~g~~w~~~~p~pa~~~Yv~~I~~la~-~~P~~LlAh~YvrYlGdlsGGQiI~~~la~~~L 226 (286)
.. -...+|.++. .+ |-+. ..+|+|+|.+|++++.+++. .++..+++..+.-+-+- .-|++++.+..-
T Consensus 74 ~~---~~~~iE~~lh~~~~~-Gi~~-~~~~~p~t~aY~~~l~~~a~~~~~~~~laAl~pc~~~Y----~~i~~~l~~~~~ 144 (220)
T 1rtw_A 74 YY---ISKELEMFEKKAQEL-GISL-NGEIDWRAKSYVNYLLSVASLGSFLEGFTALYCEEKAY----YEAWKWVRENLK 144 (220)
T ss_dssp HH---HHHHHHHHHHHHHHT-TCCS-SSCCCHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHH----HHHHHHHHHHCS
T ss_pred HH---HHHHHHHHHHHHHHC-CCCC-CCCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHH----HHHHHHHHhccC
Confidence 00 0011133332 22 3332 46889999999999999875 46777777766654322 233344443321
Q ss_pred CCCC-cccccccCC--hhHHHHHHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHH
Q 023201 227 GGKE-LEFYKWDGE--LPKLLQNVRDKLNKVAESWTREEKNRCLEETELSFKHSGE 279 (286)
Q Consensus 227 ~~~g-l~FY~F~gd--~~~~k~~yr~~Ld~l~~~l~~eek~~iI~EA~~aF~ln~~ 279 (286)
++.. ..|.+.+++ -...-+..++.+|++++..++++++++.+--..+-++-..
T Consensus 145 ~~~~y~~Wi~~y~~~~f~~~v~~~~~~ld~~~~~~~~~~~~~~~~~f~~a~~lE~~ 200 (220)
T 1rtw_A 145 ERSPYQEFINHWSSQEFGEYVKRIEKILNSLAEKHGEFEKERAREVFKEVSKFELI 200 (220)
T ss_dssp SCCTTHHHHHHHHSHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCchHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHH
Confidence 1111 112222232 2456778889999998778888887766665555554433
No 12
>4fn6_A Thiaminase-2, thiaminase II; alpha-helix, vitamin B1, BI-functional enzyme, C of thiamine INTO HMP and THZ; HET: CME; 2.69A {Staphylococcus aureus}
Probab=97.59 E-value=0.00043 Score=61.18 Aligned_cols=177 Identities=11% Similarity=0.079 Sum_probs=108.8
Q ss_pred hHHHHHHHHHHHHhHHhhhhhcccccCCcccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHh----CCCCc-------
Q 023201 77 GFVEEMRFVAMKLHTKEQAREGEKEVKEPEERPVTKWEPTVDGYLRFLVDSKLVYDTLEGIIEK----APFPS------- 145 (286)
Q Consensus 77 ~Ls~~LR~~Tr~~H~~a~a~~~ek~~~s~~~~~L~~g~~~~~~Y~~lL~~ly~VY~aLE~al~~----~~~p~------- 145 (286)
.|+++|++.+..+=+++ -+ .||+..|..|.++.+.|+.+|.|=|+.-...=+++.. +.++.
T Consensus 2 ~ft~~L~~~~~~~w~~~-----~~---HPFv~~l~~GtL~~~~f~~YL~QDy~yl~~~~r~~a~~~aka~~~~~~~~~~~ 73 (229)
T 4fn6_A 2 EFSQKLYQAAKPIINDI-----YE---DDFIQKMLLGNIQADALRHYLQADAAYLKEFTNLYALLIPKMNSMNDVKFLVE 73 (229)
T ss_dssp CHHHHHHHHHHHHHHHH-----HH---SHHHHHHHHTCCCHHHHHHHHHHHHHTHHHHHHHHHHHSTTCCSHHHHHHHHH
T ss_pred cHHHHHHHhHHHHHHHH-----HC---ChHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHH
Confidence 48999999999888887 66 8999999999999999999999988877766666655 12210
Q ss_pred -cccccccccccHHHHHHHHHHhhhcCC----CCCCCCCchhHHHHHHHHhhcc--CccchHhHHHHHHhhhchhhHHHH
Q 023201 146 -YAEFRNTGLERSEKLAKDLEWFKEQGY----TIPEPSSPGISYVQYLEELSEK--DPQAFICHFYNIYFAHSAGGRMIG 218 (286)
Q Consensus 146 -l~~f~~p~L~Rt~aL~~DL~~l~g~~w----~~~~p~pa~~~Yv~~I~~la~~--~P~~LlAh~YvrYlGdlsGGQiI~ 218 (286)
+..+...|+ .+-+++..-+|.+. +..+|+|+|.+|++++..++.. ++..+++..+.-|.+= ..|+
T Consensus 74 ~~~~~~~~E~----~~h~~~~~~~gi~~~~~~~~~~~~p~~~aY~~~l~~~a~~~~~~~~~~aAl~pC~~~Y----~~ig 145 (229)
T 4fn6_A 74 QIEFMVEGEV----LAHDILAQIVGESYEEIIKTKVWPPSGDHYIKHMYFQAHSRENAIYTIAAMAPCPYIY----AELA 145 (229)
T ss_dssp HHHHHHSCCC----HHHHHHHHHHTSCHHHHHHSCCCCHHHHHHHHHHHHHHHHCCSHHHHHHHHTHHHHHH----HHHH
T ss_pred HHHHHHHHHH----HHHHHHHHHcCCCHHHHhhhcCCCHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHH----HHHH
Confidence 000011121 22233222234432 2357899999999999999865 6665555544332211 2334
Q ss_pred HHHHHHhcCCCCccccccc---C-ChhHHHHHHHHHHHhhccCCCHHHHHHHHHH
Q 023201 219 KKVAEKILGGKELEFYKWD---G-ELPKLLQNVRDKLNKVAESWTREEKNRCLEE 269 (286)
Q Consensus 219 ~~la~~~L~~~gl~FY~F~---g-d~~~~k~~yr~~Ld~l~~~l~~eek~~iI~E 269 (286)
+++.+..-...+..|..|= + +-...-+..++.+|++++..++++++++.+-
T Consensus 146 ~~l~~~~~~~~~~~y~~WI~~y~~~f~~~v~~~~~~ld~~~~~~~~~~~~~~~~~ 200 (229)
T 4fn6_A 146 KRSQSDHKLNREKDTAKWFDFYSTEMDDIINVFESLMNKLAESMSDKELEQVKQV 200 (229)
T ss_dssp HHHHTCTTCCTTSTHHHHHHHHTTTTHHHHHHHHHHHHHHHTTSCHHHHHHHHHH
T ss_pred HHHHHcCCCCCCChHHHHHHHHhHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHH
Confidence 4443321100222222221 2 2245566778889999878898887765543
No 13
>3ibx_A TENA, HP1287, putative thiaminase II; vitamin B1, hydrol; 2.40A {Helicobacter pylori} PDB: 2rd3_A
Probab=97.53 E-value=0.00038 Score=61.18 Aligned_cols=176 Identities=11% Similarity=0.094 Sum_probs=107.3
Q ss_pred hHHHHHHHHHHHHhHHhhhhhcccccCCcccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHh----CCCCc-------
Q 023201 77 GFVEEMRFVAMKLHTKEQAREGEKEVKEPEERPVTKWEPTVDGYLRFLVDSKLVYDTLEGIIEK----APFPS------- 145 (286)
Q Consensus 77 ~Ls~~LR~~Tr~~H~~a~a~~~ek~~~s~~~~~L~~g~~~~~~Y~~lL~~ly~VY~aLE~al~~----~~~p~------- 145 (286)
.|+++|++.+..+=+++ -+ .||+..+..|.++++.|+.+|.|=|+.-...=+++.. +.++.
T Consensus 6 ~f~~~L~~~~~~~~~~~-----~~---HPFv~~l~~GtL~~~~f~~YL~QD~~yl~~~~r~~a~~~aka~~~~~~~~~~~ 77 (221)
T 3ibx_A 6 QVSQYLYQNAQSIWGDC-----IS---HPFVQGIGRGTLERDKFRFYIIQDYLYLLEYAKVFALGVVKACDEAVMREFSN 77 (221)
T ss_dssp CHHHHHHHHHHHHHHHH-----HT---SHHHHHHHHTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSHHHHHHHHH
T ss_pred hHHHHHHHhhHHHHHHH-----HC---CHHHHHHHcCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCHHHHHHHHH
Confidence 59999999998888777 66 8999999999999999999999988776666665544 22221
Q ss_pred -cccccccccccHHHHHHHHHHhhhcCC---CCCCCCCchhHHHHHHHHhhcc-CccchHhHHHHHHhhhchhhHHHHHH
Q 023201 146 -YAEFRNTGLERSEKLAKDLEWFKEQGY---TIPEPSSPGISYVQYLEELSEK-DPQAFICHFYNIYFAHSAGGRMIGKK 220 (286)
Q Consensus 146 -l~~f~~p~L~Rt~aL~~DL~~l~g~~w---~~~~p~pa~~~Yv~~I~~la~~-~P~~LlAh~YvrYlGdlsGGQiI~~~ 220 (286)
+......|+ .+-+++..-+|.+. ...+|+|+|.+|++++..++.. ++..+++..+.-+.+= .-|+++
T Consensus 78 ~~~~~~~~E~----~~h~~~~~~~Gi~~~~~~~~~~~p~~~aY~~~l~~~a~~~~~~~~~aAl~pc~~~Y----~~ig~~ 149 (221)
T 3ibx_A 78 AIQDILNNEM----SIHNHYIRELQITQKELQNACPTLANKSYTSYMLAEGFKGSIKEVAAAVLSCGWSY----LVIAQN 149 (221)
T ss_dssp HHHHHHSCTT----SHHHHHHHHTTCCHHHHHHCCCCHHHHHHHHHHHHHHHHSCHHHHHHHTHHHHHHH----HHHHHH
T ss_pred HHHHHHHHHH----HHHHHHHHHcCCCHHHHhhccCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH----HHHHHH
Confidence 001111121 12222211123322 1357899999999999998764 5666666555433211 122333
Q ss_pred HHHHhcCCCCccccc-c---cC--ChhHHHHHHHHHHHhhccCCCHHHHHHHHHH
Q 023201 221 VAEKILGGKELEFYK-W---DG--ELPKLLQNVRDKLNKVAESWTREEKNRCLEE 269 (286)
Q Consensus 221 la~~~L~~~gl~FY~-F---~g--d~~~~k~~yr~~Ld~l~~~l~~eek~~iI~E 269 (286)
+.+.. +....+.|. | ++ +-...-+..++.+|++++..++++++++.+-
T Consensus 150 l~~~~-~~~~~~~y~~WI~~y~~~~f~~~v~~~~~~ld~~~~~~~~~~~~~~~~~ 203 (221)
T 3ibx_A 150 LSQIP-NALEHAFYGHWIKGYSSKEFQACVNWNINLLDSLTLASSKQEIEKLKEI 203 (221)
T ss_dssp HTCSS-STTTCTTTHHHHHHTTSHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHH
T ss_pred HHhcC-CCCCCChHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHH
Confidence 32211 011123342 3 22 2245566778899999878898887765443
No 14
>2qcx_A Transcriptional activator TENA; UP-DOWN bundle, hydrolase; HET: PF1; 2.20A {Bacillus subtilis} PDB: 1yak_A* 1yaf_A* 1to9_A* 1tyh_A
Probab=97.49 E-value=0.0004 Score=62.96 Aligned_cols=188 Identities=14% Similarity=0.127 Sum_probs=113.7
Q ss_pred hHHHHHHHHHHHHhHHhhhhhcccccCCcccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHh----CCCCccc-ccc-
Q 023201 77 GFVEEMRFVAMKLHTKEQAREGEKEVKEPEERPVTKWEPTVDGYLRFLVDSKLVYDTLEGIIEK----APFPSYA-EFR- 150 (286)
Q Consensus 77 ~Ls~~LR~~Tr~~H~~a~a~~~ek~~~s~~~~~L~~g~~~~~~Y~~lL~~ly~VY~aLE~al~~----~~~p~l~-~f~- 150 (286)
.|+++|++.+..+=.++ -+ .||+..|..|.++++.|+.+|.|=|+.-...=+++.. +.++... .+.
T Consensus 29 ~f~~~L~~~~~~~w~~~-----~~---HPFv~~l~~GtL~~e~f~~YL~QDy~yL~~f~r~la~a~aka~~~~~~~~l~~ 100 (263)
T 2qcx_A 29 KFSEECRSAAAEWWEGS-----FV---HPFVQGIGDGTLPIDRFKYYVLQDSYYLTHFAKVQSFGAAYAKDLYTTGRMAS 100 (263)
T ss_dssp SHHHHHHHHTHHHHHHH-----HT---CHHHHHHHHSCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSHHHHHHHHH
T ss_pred HHHHHHHHhhHHHHHHH-----HC---CHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHH
Confidence 49999999998877777 66 8999999999999999999999988776666555544 2322100 000
Q ss_pred --ccccccHHHHHHHHHHhhhcCC---CCCCCCCchhHHHHHHHHhhcc-CccchHhHHHHHHhhhchhhHHHHHHHHHH
Q 023201 151 --NTGLERSEKLAKDLEWFKEQGY---TIPEPSSPGISYVQYLEELSEK-DPQAFICHFYNIYFAHSAGGRMIGKKVAEK 224 (286)
Q Consensus 151 --~p~L~Rt~aL~~DL~~l~g~~w---~~~~p~pa~~~Yv~~I~~la~~-~P~~LlAh~YvrYlGdlsGGQiI~~~la~~ 224 (286)
...+..--.+-+++..-+|-+. +..+|+|+|.+|++++.+++.. ++..+++-.+.-+-+- ..|++++.+.
T Consensus 101 ~i~~~~~~E~~lh~~~~~~~Gi~~~~l~~~~~~pat~aYt~~l~~~a~~g~~~~~laAl~pC~w~Y----~~ig~~l~~~ 176 (263)
T 2qcx_A 101 HAQGTYEAEMALHREFAELLEISEEERKAFKPSPTAYSFTSHMYRSVLSGNFAEILAALLPCYWLY----YEVGEKLLHC 176 (263)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCHHHHHSCCCCHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHH----HHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHHhhCCCChHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH----HHHHHHHHhc
Confidence 0000001112222222224332 2468899999999999998764 6666777666543211 2233344321
Q ss_pred hcCCCCcccccc---cCCh--hHHHHHHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHH
Q 023201 225 ILGGKELEFYKW---DGEL--PKLLQNVRDKLNKVAESWTREEKNRCLEETELSFKHSG 278 (286)
Q Consensus 225 ~L~~~gl~FY~F---~gd~--~~~k~~yr~~Ld~l~~~l~~eek~~iI~EA~~aF~ln~ 278 (286)
. . ....|..| +++. ...-+..++.+|++++..++++++++.+--..+-++-.
T Consensus 177 ~-~-~~~~Y~~WI~~y~~~df~~~v~~~~~lld~l~~~~s~~~~~~l~~~F~~a~~lE~ 233 (263)
T 2qcx_A 177 D-P-GHPIYQKWIGTYGGDWFRQQVEEQINRFDELAENSTEEVRAKMKENFVISSYYEY 233 (263)
T ss_dssp C-C-CSHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHH
T ss_pred c-C-CCcHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHH
Confidence 1 1 11112222 2322 46677888999999777888888776665555544433
No 15
>1z72_A Transcriptional regulator, putative; structu genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; 1.45A {Streptococcus pneumoniae} SCOP: a.132.1.3 PDB: 2a6b_A
Probab=97.47 E-value=0.00056 Score=60.00 Aligned_cols=185 Identities=9% Similarity=-0.034 Sum_probs=109.1
Q ss_pred CCCchhHHHHHHHHHHHHhHHhhhhhcccccCCcccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHh----CCCCcc-
Q 023201 72 PGEAKGFVEEMRFVAMKLHTKEQAREGEKEVKEPEERPVTKWEPTVDGYLRFLVDSKLVYDTLEGIIEK----APFPSY- 146 (286)
Q Consensus 72 p~~~~~Ls~~LR~~Tr~~H~~a~a~~~ek~~~s~~~~~L~~g~~~~~~Y~~lL~~ly~VY~aLE~al~~----~~~p~l- 146 (286)
|-.+.+|+++|++.+..+=.++ -+ .||+..|..|.++++.|+.+|.|=|+.-...=+++.. +.++.-
T Consensus 10 ~~~p~~f~~~L~~~~~~~w~~~-----~~---HPFv~~l~~GtL~~~~f~~YL~QDy~yl~~f~r~~a~~~~ka~~~~~~ 81 (225)
T 1z72_A 10 AFQPGLTVGELLKSSQKDWQAA-----IN---HRFVKELFAGTIENKVLKDYLIQDYHFFDAFLSMLGACVAHADKLESK 81 (225)
T ss_dssp SSCCHHHHHHHHHTTHHHHHHH-----HT---CHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCHHHH
T ss_pred CCCChhHHHHHHHHhHHHHHHH-----HC---ChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH
Confidence 4445889999999998877777 56 8999999999999999999999988776666555544 232210
Q ss_pred cccc---ccccccHHHHHHHHHHhhhcCCC---CCCCCCchhHHHHHHHHhhcc-CccchHhHHHHHHhhhchhhHHHHH
Q 023201 147 AEFR---NTGLERSEKLAKDLEWFKEQGYT---IPEPSSPGISYVQYLEELSEK-DPQAFICHFYNIYFAHSAGGRMIGK 219 (286)
Q Consensus 147 ~~f~---~p~L~Rt~aL~~DL~~l~g~~w~---~~~p~pa~~~Yv~~I~~la~~-~P~~LlAh~YvrYlGdlsGGQiI~~ 219 (286)
..+. ..-+..-..+-+++..-+|-+.+ ..+|+|+|.+|++++..++.. ++..+++-.+.-+-+- .-|++
T Consensus 82 ~~~~~~~~~~~~~E~~~~~~~~~~~Gi~~~~~~~~~~~p~t~aY~~~l~~~a~~~~~~~~~aAl~pc~~~Y----~~i~~ 157 (225)
T 1z72_A 82 LRFAKQLGFLEADEDGYFQKAFKELKVAENDYLEVTLHPVTKAFQDLMYSAVASSDYAHLLVMLVIAEGLY----LDWGS 157 (225)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCCTHHHHSCCCCHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH----HHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHhhcCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHH----HHHHH
Confidence 0000 00011111222332222243331 468899999999999998754 6666666665543221 11222
Q ss_pred HHHHHhcCCCCc---ccccccCC--hhHHHHHHHHHHHhhccCCCHHHHHHHHHHHHHH
Q 023201 220 KVAEKILGGKEL---EFYKWDGE--LPKLLQNVRDKLNKVAESWTREEKNRCLEETELS 273 (286)
Q Consensus 220 ~la~~~L~~~gl---~FY~F~gd--~~~~k~~yr~~Ld~l~~~l~~eek~~iI~EA~~a 273 (286)
+ .+. . .++. .+.+.+++ -...-+..++.+|++++. +++++ ++.+--..+
T Consensus 158 ~-~~~-~-~~~~~y~~Wi~~y~~~~f~~~v~~~~~lld~~~~~-~~~~~-~~~~~f~~a 211 (225)
T 1z72_A 158 K-DLA-L-PEVYIHSEWINLHRGPFFAEWVQFLVDELNRVGKN-REDLT-ELQQRWNQA 211 (225)
T ss_dssp C-SSC-C-CSSHHHHHHHHTTCSHHHHHHHHHHHHHHHHHHC--CCCHH-HHHHHHHHH
T ss_pred h-hcc-C-CCcchHHHHHHHhCCHHHHHHHHHHHHHHHHHHcC-CHHHH-HHHHHHHHH
Confidence 2 111 1 1221 22223342 246677888999999766 66666 544443333
No 16
>1rcw_A CT610, CADD; iron, DI-iron, redox enzyme, metallo enzyme, oxidoreductase,; 2.50A {Chlamydia trachomatis} SCOP: a.132.1.4
Probab=97.39 E-value=0.00082 Score=58.51 Aligned_cols=189 Identities=10% Similarity=0.078 Sum_probs=110.7
Q ss_pred hHHHHHHHHHHHHhHHhhhhhcccccCCcccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHh----CCCCcccccc--
Q 023201 77 GFVEEMRFVAMKLHTKEQAREGEKEVKEPEERPVTKWEPTVDGYLRFLVDSKLVYDTLEGIIEK----APFPSYAEFR-- 150 (286)
Q Consensus 77 ~Ls~~LR~~Tr~~H~~a~a~~~ek~~~s~~~~~L~~g~~~~~~Y~~lL~~ly~VY~aLE~al~~----~~~p~l~~f~-- 150 (286)
.|.++||+.+. -|.. -+ .||...+..|.++++.|+.++.|-|+.-..+=..+.. ..++......
T Consensus 7 ~f~~~L~~~~~-~~~~------~~---HPf~~~l~~G~L~~e~~~~yl~qdy~yl~~f~~~~a~~~~~~~~~~~~~~~~~ 76 (231)
T 1rcw_A 7 NFLDQLDLIIQ-NKHM------LE---HTFYVKWSKGELTKEQLQAYAKDYYLHIKAFPKYLSAIHSRCDDLEARKLLLD 76 (231)
T ss_dssp CHHHHHHHHHH-HTCG------GG---SHHHHHHHTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCCCHHHHHHHHH
T ss_pred HHHHHHHHHHH-Hhhc------cc---CHHHHHHhCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHH
Confidence 48999999998 2322 23 6899999999999999999999977654444444333 2222111000
Q ss_pred --ccc----cccHHHHHHHHHHhhhcCC---CCCCCCCchhHHHHHHHHhhcc-CccchHhHHHHHHhhhchhhHHHHHH
Q 023201 151 --NTG----LERSEKLAKDLEWFKEQGY---TIPEPSSPGISYVQYLEELSEK-DPQAFICHFYNIYFAHSAGGRMIGKK 220 (286)
Q Consensus 151 --~p~----L~Rt~aL~~DL~~l~g~~w---~~~~p~pa~~~Yv~~I~~la~~-~P~~LlAh~YvrYlGdlsGGQiI~~~ 220 (286)
..+ -.=.+...++++.+ |-+. +..+|+|++..|++++-.++.. ++...+|..+ -|++. |..+..+.
T Consensus 77 ~i~~e~~~~~~h~~l~~~~~~~~-Gi~~~~~~~~~~~p~t~~y~~~~~~~~~~~~~~~~laal~-~~E~~--~~~~~~~~ 152 (231)
T 1rcw_A 77 NLMDEENGYPNHIDLWKQFVFAL-GVTPEELEAHEPSEAAKAKVATFMRWCTGDSLAAGVAALY-SYESQ--IPRIAREK 152 (231)
T ss_dssp HHHHHHSSSSCHHHHHHHHHHHT-TCCHHHHHHCCCCHHHHHHHHHHHHHHTSSCHHHHHHHHH-HHHTT--HHHHHHHH
T ss_pred HHHHhcCCCCChHHHHHHHHHHc-CCCHHHHhcCCCCHHHHHHHHHHHHHHcCCCHHHHHHHHH-HHHHH--HHHHHHHH
Confidence 000 00023333444444 4332 2356899999999999998765 6666777654 44432 33443222
Q ss_pred HH---HHh-cC-CCCcccccccC--ChhHHHHHHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q 023201 221 VA---EKI-LG-GKELEFYKWDG--ELPKLLQNVRDKLNKVAESWTREEKNRCLEETELSFKHSGEILRLI 284 (286)
Q Consensus 221 la---~~~-L~-~~gl~FY~F~g--d~~~~k~~yr~~Ld~l~~~l~~eek~~iI~EA~~aF~ln~~i~~ei 284 (286)
+. +.+ +. ..+..||.-.+ | .+--...++.+|.++. ++++++++....+.++-...++.+
T Consensus 153 ~~~~~~~~~wi~~~~~~~f~~h~~~d-~~h~~~~~~~l~~~~~----~~~~~~~~~~~~~~~le~~fwd~~ 218 (231)
T 1rcw_A 153 IRGLTEYFGFSNPEDYAYFTEHEEAD-VRHAREEKALIEMLLK----DDADKVLEASQEVTQSLYGFLDSF 218 (231)
T ss_dssp HHHHHHHSCCCSGGGGHHHHHHHHHH-HHHHHHHHHHHHHHCS----SCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHCCCCChhhhHHHHHHHHHh-HHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 21 222 22 34555654322 2 2334566778888852 566678888888877776665543
No 17
>3oql_A TENA homolog; transcriptional activator, structural genomics, joint center structural genomics, JCSG, protein structure initiative; 2.54A {Pseudomonas syringae PV}
Probab=97.30 E-value=0.001 Score=60.74 Aligned_cols=190 Identities=9% Similarity=0.048 Sum_probs=113.2
Q ss_pred hHHHHHHHHHHHHhHHhhhhhcccccCCcccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHh----CCCC------cc
Q 023201 77 GFVEEMRFVAMKLHTKEQAREGEKEVKEPEERPVTKWEPTVDGYLRFLVDSKLVYDTLEGIIEK----APFP------SY 146 (286)
Q Consensus 77 ~Ls~~LR~~Tr~~H~~a~a~~~ek~~~s~~~~~L~~g~~~~~~Y~~lL~~ly~VY~aLE~al~~----~~~p------~l 146 (286)
+|+++|++.+..+=++. -+ .||...|..|.++.+.++.++.|-|..-..+=+++.. ..+. ..
T Consensus 20 ~~se~L~~~~~~iw~~i-----~~---HPFv~~L~dGtL~~e~Fr~Yl~QDy~YL~~far~~Al~~aKa~~~~~~~~~~~ 91 (262)
T 3oql_A 20 AWAQQLINDCSPAKARV-----VE---HELYQQMRDAKLSPQIMRQYLIGGWPVVEQFAVYMAKNLTKTRFGRHPGEDMA 91 (262)
T ss_dssp HHHHHHHHHHHHHHHHH-----HT---CHHHHHHHTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCTTSCHHHHHH
T ss_pred HHHHHHHHHhHHHHHHH-----HC---ChHHHHHHcCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhCccccCCChHHH
Confidence 99999999999998888 77 8999999999999999999999888665555555443 1110 01
Q ss_pred ccccccccccHHHHHHHH--HHh--hhcCC---CCCCCCCchhHHHHHHHHhhcc-CccchHhHH-HHHHhhhchhhHHH
Q 023201 147 AEFRNTGLERSEKLAKDL--EWF--KEQGY---TIPEPSSPGISYVQYLEELSEK-DPQAFICHF-YNIYFAHSAGGRMI 217 (286)
Q Consensus 147 ~~f~~p~L~Rt~aL~~DL--~~l--~g~~w---~~~~p~pa~~~Yv~~I~~la~~-~P~~LlAh~-YvrYlGdlsGGQiI 217 (286)
..+.. +--..+.+-.|+ .|+ .|-+- +..+|+|.|.+|+.++-.++.. +....+|-. |..| ..|
T Consensus 92 ~~~l~-~~i~vE~~H~~~~~~f~~~~Gis~eel~~~~~~P~~~aYt~~ml~~a~~g~l~e~lAAl~ya~e-------~~i 163 (262)
T 3oql_A 92 RRWLM-RNIRVELNHADYWVNWCAAHDVTLEDLHDQRVAPELHALSHWCWQTSSSDSLAVAMAATNYAIE-------GAT 163 (262)
T ss_dssp HHHHH-HHHHHTTTHHHHHHHHHHTTTCCHHHHHHTCSCGGGGHHHHHHHHHHHHSCHHHHHHHTTTHHH-------HHH
T ss_pred HHHHH-HHHHHHHhhHHHHHHHHHHcCCCHHHHhcCCCChHHHHHHHHHHHHHccCCHHHHHHHHHHHHH-------HHh
Confidence 11100 000001111122 222 13221 1357899999999999998754 444455554 7776 233
Q ss_pred HH---------HHHHHh-c--CCCCcccccccCChhHH-HHHHHHHHHhhccCC-CHHHHHHHHHHHHHHHHHHHHHHH
Q 023201 218 GK---------KVAEKI-L--GGKELEFYKWDGELPKL-LQNVRDKLNKVAESW-TREEKNRCLEETELSFKHSGEILR 282 (286)
Q Consensus 218 ~~---------~la~~~-L--~~~gl~FY~F~gd~~~~-k~~yr~~Ld~l~~~l-~~eek~~iI~EA~~aF~ln~~i~~ 282 (286)
++ +..+.. . +.....|+.++.+-... -....+.+|.+++.- |+++++++.+.+..+.++-...++
T Consensus 164 g~~s~~~~~g~~~~~~~~~~~~~~~~~w~~~h~~~D~~H~~e~~~li~~l~~~~~~~~e~~~~~~a~~~S~~~~~~fld 242 (262)
T 3oql_A 164 GEWSAVVCSTGVYAEAFAEETRKKSMKWLKMHAQYDDAHPWEALEIICTLVGNKPSLQLQAELRQAVTKSYDYMYLFLE 242 (262)
T ss_dssp HHHHHHHHSSSHHHHTSCHHHHHHHHHHHHHHHTCC-CHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHhhhhHHHhcCCCcccChHHHHHHHHHHHHHHHhHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 32 111111 0 01123444444311111 334567888886556 899999999888888776555443
No 18
>3no6_A Transcriptional activator TENA; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.65A {Staphylococcus epidermidis} SCOP: a.132.1.0
Probab=97.09 E-value=0.0024 Score=57.43 Aligned_cols=178 Identities=15% Similarity=0.125 Sum_probs=107.2
Q ss_pred hhHHHHHHHHHHHHhHHhhhhhcccccCCcccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHh----CCCCc-cccc-
Q 023201 76 KGFVEEMRFVAMKLHTKEQAREGEKEVKEPEERPVTKWEPTVDGYLRFLVDSKLVYDTLEGIIEK----APFPS-YAEF- 149 (286)
Q Consensus 76 ~~Ls~~LR~~Tr~~H~~a~a~~~ek~~~s~~~~~L~~g~~~~~~Y~~lL~~ly~VY~aLE~al~~----~~~p~-l~~f- 149 (286)
..|+++|++....+=.++ -+ .||+..|..|.++.+.|..+|.|=|..-...=+++.. +.++. ...+
T Consensus 20 ~~ft~~L~~~~~~~w~~~-----~~---HPFv~~L~~GtL~~e~F~~YL~QD~~YL~~far~~a~a~aka~~~~~~~~~~ 91 (248)
T 3no6_A 20 MTFSKELREASRPIIDDI-----YN---DGFIQDLLAGKLSNQAVRQYLRADASYLKEFTNIYAMLIPKMSSMEDVKFLV 91 (248)
T ss_dssp BCHHHHHHHHHHHHHHHH-----HH---SHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHGGGCSCHHHHHHHH
T ss_pred ccHHHHHHHhCHHHHHHH-----HC---CHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHH
Confidence 469999999998888888 66 8999999999999999999999988776666665554 22221 0000
Q ss_pred --cccccccHHHHHHHHHHhhhcCC----CCCCCCCchhHHHHHHHHhhcc--CccchHhH---HHHHHhhhchhhHHHH
Q 023201 150 --RNTGLERSEKLAKDLEWFKEQGY----TIPEPSSPGISYVQYLEELSEK--DPQAFICH---FYNIYFAHSAGGRMIG 218 (286)
Q Consensus 150 --~~p~L~Rt~aL~~DL~~l~g~~w----~~~~p~pa~~~Yv~~I~~la~~--~P~~LlAh---~YvrYlGdlsGGQiI~ 218 (286)
...-+.+--.+-.+...-.|.+. +..+|+|+|.+|++++.+++.. +...+++. |+..| .-|+
T Consensus 92 ~~~~~~~~~E~~lh~~~~~~~gi~~~~~~~~~~~~p~~~aYt~~ll~~a~~~g~~~~~laAl~PC~w~Y-------~eig 164 (248)
T 3no6_A 92 EQIEFMLEGEVEAHEVLADFINEPYEEIVKEKVWPPSGDHYIKHMYFNAFARENAAFTIAAMAPCPYVY-------AVIG 164 (248)
T ss_dssp HHHHHHHTCCCHHHHHHHHHTTSCHHHHCCSCCCCHHHHHHHHHHHHHHHHCSSTHHHHHHHTHHHHHH-------HHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHHhhhcCCCHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHH-------HHHH
Confidence 00000111122222222224322 2357899999999999999865 44444444 44444 2334
Q ss_pred HHHHHHhcCCCCccccc-c---cC-ChhHHHHHHHHHHHhhccCCCHHHHHHHHHH
Q 023201 219 KKVAEKILGGKELEFYK-W---DG-ELPKLLQNVRDKLNKVAESWTREEKNRCLEE 269 (286)
Q Consensus 219 ~~la~~~L~~~gl~FY~-F---~g-d~~~~k~~yr~~Ld~l~~~l~~eek~~iI~E 269 (286)
+++.+..-...+ +.|. | ++ +-...-+..++.+|++++..++++++++.+-
T Consensus 165 ~~l~~~~~~~~~-~~Y~~WI~~Y~~ef~~~v~~~~~~ld~~~~~~s~~~~~~l~~~ 219 (248)
T 3no6_A 165 KRAMEDPKLNKE-SVTSKWFQFYSTEMDELVDVFDQLMDRLTKHCSETEKKEIKEN 219 (248)
T ss_dssp HHHHHCTTCCTT-STTHHHHHHHHHHTHHHHHHHHHHHHHHTTTCCHHHHHHHHHH
T ss_pred HHHHhcCCCCCC-chHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHH
Confidence 444432211122 2222 2 12 1234456678889999878888887765543
No 19
>3bjd_A Putative 3-oxoacyl-(acyl-carrier-protein) synthas; structural genomics, APC5632, 3-oxoacyl-(acyl-carrier-protei synthase, PSI-2; HET: MSE; 1.85A {Pseudomonas aeruginosa PAO1}
Probab=96.99 E-value=0.0047 Score=57.86 Aligned_cols=192 Identities=13% Similarity=0.059 Sum_probs=114.9
Q ss_pred CchhHHHHHHHHHHHHhHHhhhhhcccccCCcccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHH----hCCCCccccc
Q 023201 74 EAKGFVEEMRFVAMKLHTKEQAREGEKEVKEPEERPVTKWEPTVDGYLRFLVDSKLVYDTLEGIIE----KAPFPSYAEF 149 (286)
Q Consensus 74 ~~~~Ls~~LR~~Tr~~H~~a~a~~~ek~~~s~~~~~L~~g~~~~~~Y~~lL~~ly~VY~aLE~al~----~~~~p~l~~f 149 (286)
....|.++|++.+.+ |.. .+ .||...+..|.++++.++.++.+-|+.-..+=..+. +..++.....
T Consensus 106 s~~~F~~~L~~~~~~-~~~------~~---HPf~~~l~~G~Ls~e~~r~yl~Qdy~yl~~f~~~lA~~~a~~~~~~~r~~ 175 (332)
T 3bjd_A 106 SEEDFQKRLEQEIAA-QSR------ER---HPMSQYVFSGSASRAQLQVFLRHQWFRTFRLYRDAADLLVNLTDVDEAAA 175 (332)
T ss_dssp CHHHHHHHHHHHHHC-C--------CC---CHHHHHHHHTCCCHHHHHHHHHHHHHHHTTHHHHHHHHHHTCCSHHHHHH
T ss_pred CHHHHHHHHHHHHhh-ccc------cc---CcHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHH
Confidence 457799999999888 432 23 588888999999999999999998764333332222 2222211100
Q ss_pred c-----------ccccccHHHHHHHHHHhhhcC--CCCCCCCCchhHHHHHHHHhh-ccCccchHhHHHHHHhhhchhhH
Q 023201 150 R-----------NTGLERSEKLAKDLEWFKEQG--YTIPEPSSPGISYVQYLEELS-EKDPQAFICHFYNIYFAHSAGGR 215 (286)
Q Consensus 150 ~-----------~p~L~Rt~aL~~DL~~l~g~~--w~~~~p~pa~~~Yv~~I~~la-~~~P~~LlAh~YvrYlGdlsGGQ 215 (286)
. .++..=.+...+.++.+ |-+ |+...+.|.+..|+.+....+ ..++..++|+.++.-.-...+-+
T Consensus 176 l~e~i~DE~G~g~~e~~H~el~~~~l~~l-Gld~~~~~~~~~p~~~~~v~~~~~~~~~~~~~~alaal~~~E~~~p~~y~ 254 (332)
T 3bjd_A 176 LARYLYGELGEEDEKGSHPRLLAKLLEAI-GLEADFQAVSTMPEEIAYLNNRARAFRHAEVGWGLAVFYITELVVPGNHE 254 (332)
T ss_dssp HHHHHHHHTTTTCGGGCHHHHHHHHHHHT-TCCCCTTCCCCCHHHHHHHHHHHHHHHCSSTHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCccccHHHHHHHHHHHc-CCChhHhcccCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhhHHHHH
Confidence 0 01111145666666766 543 445566788999999999886 45677788998877433333333
Q ss_pred HHHHHHHHHh-cCCCCcccccccC--C---hhHHHHHHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 023201 216 MIGKKVAEKI-LGGKELEFYKWDG--E---LPKLLQNVRDKLNKVAESWTREEKNRCLEETELSFKHSGEILRL 283 (286)
Q Consensus 216 iI~~~la~~~-L~~~gl~FY~F~g--d---~~~~k~~yr~~Ld~l~~~l~~eek~~iI~EA~~aF~ln~~i~~e 283 (286)
-|.+.+.+ + ++.++..||+--. | ....| ...++.+ + ++++++.++..+..++++....++.
T Consensus 255 ~i~~~l~~-~g~~~~~~~yf~~HI~lD~~H~~~~~---~~ll~~~--~-~~~~q~~~~~a~~~~l~~~~~f~D~ 321 (332)
T 3bjd_A 255 KLYRALLQ-AGLSEDQAEYYKVHISLVPPRAKREW---QLIARRI--P-DVQFQNAFLTSLSQHFRVERAYYDA 321 (332)
T ss_dssp HHHHHHHH-TTCCTTTTHHHHHHHHHCC---CTTH---HHHHTTT--T-CHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHH-cCCCcccchHHHHHHHHhHHHHHHHH---HHHHHhC--C-CHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44455655 4 4344667765321 2 22223 3466776 2 5666678888886665555544443
No 20
>3mvu_A TENA family transcriptional regulator; TENA/THI-4/PQQC family, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.80A {Ruegeria SP} SCOP: a.132.1.0
Probab=96.79 E-value=0.0045 Score=54.50 Aligned_cols=177 Identities=11% Similarity=0.073 Sum_probs=104.3
Q ss_pred hhHHHHHHHHHHHHhHHhhhhhcccccCCcccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHh----CCCCc-ccccc
Q 023201 76 KGFVEEMRFVAMKLHTKEQAREGEKEVKEPEERPVTKWEPTVDGYLRFLVDSKLVYDTLEGIIEK----APFPS-YAEFR 150 (286)
Q Consensus 76 ~~Ls~~LR~~Tr~~H~~a~a~~~ek~~~s~~~~~L~~g~~~~~~Y~~lL~~ly~VY~aLE~al~~----~~~p~-l~~f~ 150 (286)
.+|+++|+..+..+=+++ -+ .||+..|..|.++.+.|..+|.|=|+.-...=+++.. +.++. ...+.
T Consensus 7 g~f~~~L~~~~~~~w~~~-----~~---HPFv~~l~~GtL~~~~f~~YL~QD~~yl~~~~r~~a~~~aka~~~~~~~~~~ 78 (226)
T 3mvu_A 7 GKAFSLMRAEAEPAWRAY-----TH---HAFVEGLKAGTLPREAFLHYLQQDYVFLIHFSRAWALAVVKSETHSEMLAAV 78 (226)
T ss_dssp CHHHHHHHHHTTTHHHHH-----HT---CHHHHHHHHTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHH
T ss_pred CcHHHHHHHhCHHHHHHH-----HC---CHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHH
Confidence 479999999988877777 66 8999999999999999999999988777666665554 22221 00000
Q ss_pred c--ccc-ccHHHHHHHHHHhhhcCC---CCCCCCCchhHHHHHHHHhhcc-CccchHhHHHHHHhhhchhhHHHHHHHHH
Q 023201 151 N--TGL-ERSEKLAKDLEWFKEQGY---TIPEPSSPGISYVQYLEELSEK-DPQAFICHFYNIYFAHSAGGRMIGKKVAE 223 (286)
Q Consensus 151 ~--p~L-~Rt~aL~~DL~~l~g~~w---~~~~p~pa~~~Yv~~I~~la~~-~P~~LlAh~YvrYlGdlsGGQiI~~~la~ 223 (286)
. ..+ ..--.+-+++..-+|.+. +..+|+|+|.+|++++..++.. ++..+++-.+.-+.+= .-|++++.+
T Consensus 79 ~~~~~~~~~E~~~h~~~~~~~Gi~~~~~~~~~~~p~~~aY~~~l~~~a~~~~~~~~~aAl~pc~~~Y----~~ig~~l~~ 154 (226)
T 3mvu_A 79 GTVNALVAEEMQLHIGICEASGISQEALFATRERAENLAYTRFVLEAGYSGDLLDLLAALAPCVMGY----GEIGKRLTA 154 (226)
T ss_dssp HHHHHHHTTHHHHHHHHHHHTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHH----HHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHHhhCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH----HHHHHHHHh
Confidence 0 000 001122222222223322 2457899999999999998754 5555555555433221 233344443
Q ss_pred HhcCCCCccccccc----C-ChhHHHHHHHHHHH-----hhcc-CCCHHHHHHHH
Q 023201 224 KILGGKELEFYKWD----G-ELPKLLQNVRDKLN-----KVAE-SWTREEKNRCL 267 (286)
Q Consensus 224 ~~L~~~gl~FY~F~----g-d~~~~k~~yr~~Ld-----~l~~-~l~~eek~~iI 267 (286)
.- .+..|..|= + +-..+-+..++.+| +++. ..++++++++.
T Consensus 155 ~~---~~~~y~~WI~~y~~~~f~~~v~~~~~~ld~~~~~~~~~~~~~~~~~~~~~ 206 (226)
T 3mvu_A 155 EA---TSTLYGDWIDTYGGDDYQAACKAVGTLLDDALERRLGAEFTSSPRWSRLC 206 (226)
T ss_dssp HC---SCSTTHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHCTTGGGSHHHHHHH
T ss_pred cC---CCCcchHHHHHcCCHHHHHHHHHHHHHHCchhHHHHhhhccChHHHHHHH
Confidence 31 232232221 2 22455667778888 7764 45666665544
No 21
>2a2m_A Hypothetical protein BT3146; putative TENA family transcriptional regulator, structural G joint center for structural genomics; 1.88A {Bacteroides thetaiotaomicron} SCOP: a.132.1.3 PDB: 2a2o_A
Probab=96.75 E-value=0.013 Score=52.96 Aligned_cols=170 Identities=8% Similarity=-0.020 Sum_probs=100.5
Q ss_pred CCCchhHHHHHHHHHHHHhHHhhhhhcccccCCcccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHh----CCCCccc
Q 023201 72 PGEAKGFVEEMRFVAMKLHTKEQAREGEKEVKEPEERPVTKWEPTVDGYLRFLVDSKLVYDTLEGIIEK----APFPSYA 147 (286)
Q Consensus 72 p~~~~~Ls~~LR~~Tr~~H~~a~a~~~ek~~~s~~~~~L~~g~~~~~~Y~~lL~~ly~VY~aLE~al~~----~~~p~l~ 147 (286)
|..+..|+++|++....+=.++ -+ .||+..|..|.++.+.|..+|.|=|..-...=+++.. +.+....
T Consensus 44 ~~~~~~f~~~L~~~~~~~w~~~-----~~---HPFv~~L~~GtL~~e~F~~YL~QDy~yL~~far~~a~a~aka~~~~~~ 115 (258)
T 2a2m_A 44 VPAADSLFWKLWNGSLDTAVQV-----LQ---TDYFKGIAAGTLDPNAYGSLMVQDGYYCFRGRDDYATAATCAQDETLR 115 (258)
T ss_dssp CCCTTSHHHHHHHHTHHHHHHH-----HT---SHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSHHHH
T ss_pred CCCCchHHHHHHHhhHHHHHHH-----HC---CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHH
Confidence 4445789999999998877777 56 8999999999999999999999988777666666554 2221111
Q ss_pred cccc--cccccHHHHHHHHHHhhhcCCC-CCCCCCchhHHHHHHHHhhcc-CccchHhHHHHHHhhhchhhHHHHHHHHH
Q 023201 148 EFRN--TGLERSEKLAKDLEWFKEQGYT-IPEPSSPGISYVQYLEELSEK-DPQAFICHFYNIYFAHSAGGRMIGKKVAE 223 (286)
Q Consensus 148 ~f~~--p~L~Rt~aL~~DL~~l~g~~w~-~~~p~pa~~~Yv~~I~~la~~-~P~~LlAh~YvrYlGdlsGGQiI~~~la~ 223 (286)
.+.. .++.. .|-+++..-.|-+.+ ..+|+|+|.+|++++..++.. +...+++..+.-+-+= .-|++.+.+
T Consensus 116 ~~~~~~~~~~~--~lh~~~~~~~Gi~~~~~~~~~pat~aYt~~ll~~a~~g~~~~~laAl~pC~~~Y----~eig~~l~~ 189 (258)
T 2a2m_A 116 EFFKAKAKSYD--EYNETYHQTWHLREASGLIPGTDIKDYADYEAYVAGSLASPYMCVVMLPCEYLW----PWIANFLDG 189 (258)
T ss_dssp HHHHHHHHHHH--HHHHHHHHTSCBCCGGGBCCCHHHHHHHHHHHHHHHHSCTHHHHHHHHHHHHHH----HHHHHHHGG
T ss_pred HHHHHHHHHHH--HHHHHHHHHcCCCHHHccCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH----HHHHHHHHh
Confidence 1100 00000 222222211232221 257889999999999998764 4444444444332111 224444433
Q ss_pred HhcCCCCccccc-----ccCChhHHHHHHHHHHHhhccCCC
Q 023201 224 KILGGKELEFYK-----WDGELPKLLQNVRDKLNKVAESWT 259 (286)
Q Consensus 224 ~~L~~~gl~FY~-----F~gd~~~~k~~yr~~Ld~l~~~l~ 259 (286)
.. . .. +.|. .+++. ..-+..++.+|++++..+
T Consensus 190 ~~-~-~~-~~Y~~WI~~~Y~~~-~~v~~~~~lld~~~~~~~ 226 (258)
T 2a2m_A 190 YT-P-TN-SLYRFWIEWNGGTP-NGAYQMGNMLEQYRDKID 226 (258)
T ss_dssp GS-C-TT-STTHHHHHHHCSCC-HHHHHHHHHHHTTGGGSC
T ss_pred cc-C-CC-chHHHHHHhccCCH-HHHHHHHHHHHHHHhhcc
Confidence 21 1 11 3232 23433 777888999999865544
No 22
>1udd_A Transcriptional regulator; helix-bundle, lipid binding protein; 2.15A {Pyrococcus horikoshii} SCOP: a.132.1.3
Probab=96.64 E-value=0.0053 Score=53.85 Aligned_cols=165 Identities=9% Similarity=0.021 Sum_probs=97.6
Q ss_pred hhHHHHHHHHHHHHhHHhhhhhcccccCCcccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHh----CCCCccccccc
Q 023201 76 KGFVEEMRFVAMKLHTKEQAREGEKEVKEPEERPVTKWEPTVDGYLRFLVDSKLVYDTLEGIIEK----APFPSYAEFRN 151 (286)
Q Consensus 76 ~~Ls~~LR~~Tr~~H~~a~a~~~ek~~~s~~~~~L~~g~~~~~~Y~~lL~~ly~VY~aLE~al~~----~~~p~l~~f~~ 151 (286)
..|+++|++.+..+=.++ -+ .||+..|..|.++++.|+.+|.|=|..-...=+++.. + ++.......
T Consensus 3 M~f~~~L~~~~~~~w~~~-----~~---HPFv~~l~~GtL~~~~f~~YL~QDy~yl~~f~r~~a~~~~ka-~~~~~~~l~ 73 (226)
T 1udd_A 3 VMITDKLRRDSEQIWKKI-----FE---HPFVVQLYSGTLPLEKFKFYVLQDFNYLVGLTRALAVISSKA-EYPLMAELI 73 (226)
T ss_dssp CCHHHHHHHTTHHHHHHH-----HT---CHHHHHHHHTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-CTTHHHHHH
T ss_pred CcHHHHHHHHhHHHHHHH-----HC---CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHHHHHHHH
Confidence 358999999998877777 56 8999999999999999999999988776665555543 4 332100000
Q ss_pred ---cc-cccHHHHHHHHHHhhhcCC---CCCCCCCchhHHHHHHHHhhcc-CccchHhHHHHHHhhhchhhHHHHHHHHH
Q 023201 152 ---TG-LERSEKLAKDLEWFKEQGY---TIPEPSSPGISYVQYLEELSEK-DPQAFICHFYNIYFAHSAGGRMIGKKVAE 223 (286)
Q Consensus 152 ---p~-L~Rt~aL~~DL~~l~g~~w---~~~~p~pa~~~Yv~~I~~la~~-~P~~LlAh~YvrYlGdlsGGQiI~~~la~ 223 (286)
.+ +..--.+-+++..-.|-+. +..+|+|+|.+|++++..++.. ++..+++-.+.-+-+- .-|++++.+
T Consensus 74 ~~~~~~i~~E~~lh~~~~~~~Gi~~~~~~~~~~~p~t~aY~~~l~~~a~~~~~~~~laAl~pc~~~Y----~~ig~~l~~ 149 (226)
T 1udd_A 74 ELARDEVTVEVENYVKLLKELDLTLEDAIKTEPTLVNSAYMDFMLATAYKGNIIEGLTALLPCFWSY----AEIAEYHKD 149 (226)
T ss_dssp HHHHHHTTHHHHHHHHHHHHTTCCHHHHHHSCCCHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHH----HHHHHHTHH
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHHhhCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH----HHHHHHHHh
Confidence 00 1111122233222223322 1368899999999999998754 6777777666554322 223334433
Q ss_pred HhcCCCCccccc----ccCCh--hHHHHHHHHHHHhh
Q 023201 224 KILGGKELEFYK----WDGEL--PKLLQNVRDKLNKV 254 (286)
Q Consensus 224 ~~L~~~gl~FY~----F~gd~--~~~k~~yr~~Ld~l 254 (286)
......+ +.|. .+++. .+.-+..++.+|++
T Consensus 150 ~~~~~~~-~~y~~Wi~~y~~~~f~~~v~~~~~lld~~ 185 (226)
T 1udd_A 150 KLRDNPI-KIYREWGKVYLSNEYLNLVGRLRKIIDSS 185 (226)
T ss_dssp HHTTCSC-HHHHHHHHGGGSHHHHHHHHHHHHHHHTS
T ss_pred ccCCCCC-chHHHHHHHhCCHHHHHHHHHHHHHHHhC
Confidence 3211112 2222 23322 45566677778876
No 23
>2qzc_A Transcriptional activator TENA-1; heme oxygenase-like fold, structural genomics, joint center structural genomics, JCSG; 1.50A {Sulfolobus solfataricus P2}
Probab=96.41 E-value=0.0047 Score=53.67 Aligned_cols=123 Identities=11% Similarity=-0.020 Sum_probs=81.0
Q ss_pred hHHHHHHHHHHHHhHHhhhhhcccccCCcccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHh---CCCCc----cccc
Q 023201 77 GFVEEMRFVAMKLHTKEQAREGEKEVKEPEERPVTKWEPTVDGYLRFLVDSKLVYDTLEGIIEK---APFPS----YAEF 149 (286)
Q Consensus 77 ~Ls~~LR~~Tr~~H~~a~a~~~ek~~~s~~~~~L~~g~~~~~~Y~~lL~~ly~VY~aLE~al~~---~~~p~----l~~f 149 (286)
.|+++|++.+..+=.++ -+ .||+..|..|.++++.|+.+|.|=|+.-...=+++.. +.++. +...
T Consensus 6 ~f~~~L~~~~~~~w~~~-----~~---HpFv~~l~~GtL~~~~f~~Yl~QDy~yl~~f~r~~a~~~~ka~~~~~~~~~~~ 77 (214)
T 2qzc_A 6 GNVENLINGVGELWNKY-----VK---HEFILKMRDGSLPLDIFRYYLIQDGKYVEDMLRALLIASSKGPIDKVTKILNL 77 (214)
T ss_dssp HHHHHHHHHTTTHHHHH-----HT---CHHHHHHHTSCSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHH
T ss_pred HHHHHHHHhhHHHHHHH-----HC---ChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 68999999998776666 56 8999999999999999999999988776666665554 11321 0000
Q ss_pred cccccccHHHHHHHHHHhhhcCC---CCCCCCCchhHHHHHHHHhhccCccchHhHHHHHH
Q 023201 150 RNTGLERSEKLAKDLEWFKEQGY---TIPEPSSPGISYVQYLEELSEKDPQAFICHFYNIY 207 (286)
Q Consensus 150 ~~p~L~Rt~aL~~DL~~l~g~~w---~~~~p~pa~~~Yv~~I~~la~~~P~~LlAh~YvrY 207 (286)
...-+..--.+-+++..-.|-+. +..+|+|+|.+|++++..++..++..+++-.+.-+
T Consensus 78 ~~~~i~~E~~~h~~~~~~~Gi~~~~~~~~~~~p~t~aY~~~l~~~a~~~~~~~~aAl~pc~ 138 (214)
T 2qzc_A 78 VFSSRDKGLETHGKLYSKLDISRDVIVKTGYNLINYAYTRHLYYYANLDWNKFLVAWTPCM 138 (214)
T ss_dssp HTCC--CHHHHHHHHHHHTTCCHHHHHHSCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHHhhCCCChHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 00011222233333332234332 13688999999999999987667776776666553
No 24
>3rm5_A Hydroxymethylpyrimidine/phosphomethylpyrimidine K THI20; HMP kinase (THID), thiaminase II, transferase; 2.68A {Saccharomyces cerevisiae}
Probab=96.24 E-value=0.015 Score=57.71 Aligned_cols=180 Identities=11% Similarity=0.049 Sum_probs=104.1
Q ss_pred CchhHHHHHHH--HHHHHhHHhhhhhcccccCCcccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHh----CCCCc-c
Q 023201 74 EAKGFVEEMRF--VAMKLHTKEQAREGEKEVKEPEERPVTKWEPTVDGYLRFLVDSKLVYDTLEGIIEK----APFPS-Y 146 (286)
Q Consensus 74 ~~~~Ls~~LR~--~Tr~~H~~a~a~~~ek~~~s~~~~~L~~g~~~~~~Y~~lL~~ly~VY~aLE~al~~----~~~p~-l 146 (286)
....|++.|+. ....+=+++ -+ .||+..|..|.++.+.|..+|.|=|..-..+=+++.. +.++. .
T Consensus 328 ~~~~f~~~L~~~~~~~~~w~~~-----~~---HpFv~~L~~GtL~~~~F~~YL~QD~~yL~~far~~a~a~aka~~~~~~ 399 (550)
T 3rm5_A 328 PGGNFYEYLINHPKVKPHWDSY-----IN---HEFVKKVADGTLERKKFQFFIEQDYAYLVDYARVHCIAGSKAPCLEDM 399 (550)
T ss_dssp CSSCHHHHHHHSTTTHHHHHHH-----HT---CHHHHHHHTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSHHHH
T ss_pred CCchHHHHHHhCchhhHHHHHH-----hC---CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH
Confidence 44579999998 777777777 56 7999999999999999999999988776665555544 22221 1
Q ss_pred ccccc--cccccHHHHHHH-HHHhhhc-CC---CCCCCCCchhHHHHHHHHhhccC-ccchH---hHHHHHHhhhchhhH
Q 023201 147 AEFRN--TGLERSEKLAKD-LEWFKEQ-GY---TIPEPSSPGISYVQYLEELSEKD-PQAFI---CHFYNIYFAHSAGGR 215 (286)
Q Consensus 147 ~~f~~--p~L~Rt~aL~~D-L~~l~g~-~w---~~~~p~pa~~~Yv~~I~~la~~~-P~~Ll---Ah~YvrYlGdlsGGQ 215 (286)
..+.. ..+..--.+-.+ +..-.|. +. +..++.|+|.+|.+++.+++... ...++ .-|+..|.
T Consensus 400 ~~~~~~~~~i~~E~~~h~~~~~~~~gi~~~~~~~~~~~~p~~~aYt~~l~~~a~~g~~~~~~aAl~pC~~~Y~------- 472 (550)
T 3rm5_A 400 EKELVIVGGVRTEMGQHEKRLKEVFGVKDPDYFQKIKRGPALRAYSRYFNDVSRRGNWQELVASLTPCLMGYG------- 472 (550)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTSCCCCTTTTTSCCCCHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHH-------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHhhcCCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHH-------
Confidence 11110 011111112222 1111133 22 23578999999999999988753 33333 33444442
Q ss_pred HHHHHHHHHhcCCCCcccccc---cC--ChhHHHHHHHHHHHhhccCCCHHHHHHHHH
Q 023201 216 MIGKKVAEKILGGKELEFYKW---DG--ELPKLLQNVRDKLNKVAESWTREEKNRCLE 268 (286)
Q Consensus 216 iI~~~la~~~L~~~gl~FY~F---~g--d~~~~k~~yr~~Ld~l~~~l~~eek~~iI~ 268 (286)
.|++++.+..-...+..|..| ++ +-..+-+..++.+|++++..++++++++.+
T Consensus 473 ~ig~~l~~~~~~~~~~~Y~~WI~~Y~~~~f~~~v~~~~~~ld~~~~~~~~~~~~~l~~ 530 (550)
T 3rm5_A 473 EALTKMKGKVTAPEGSVYHEWCETYASSWYREAMDEGEKLLNHILETYPPEQLDTLVT 530 (550)
T ss_dssp HHHHTTTTCCCSCTTSHHHHHHHHTTSHHHHHHHHHHHHHHHHHHTTSCGGGHHHHHH
T ss_pred HHHHHHHhccCCCCCchHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHH
Confidence 233333211100122223223 22 224556677888999987888887766543
No 25
>2gm8_A TENA homolog/THI-4 thiaminase; transcription, transferase; HET: HMH; 2.50A {Pyrobaculum aerophilum} SCOP: a.132.1.3 PDB: 2gm7_A*
Probab=96.09 E-value=0.014 Score=51.01 Aligned_cols=166 Identities=14% Similarity=0.142 Sum_probs=97.6
Q ss_pred hhHHHHHHHHHHHHhHHhhhhhcccccCCcccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHh----CCCCc-ccccc
Q 023201 76 KGFVEEMRFVAMKLHTKEQAREGEKEVKEPEERPVTKWEPTVDGYLRFLVDSKLVYDTLEGIIEK----APFPS-YAEFR 150 (286)
Q Consensus 76 ~~Ls~~LR~~Tr~~H~~a~a~~~ek~~~s~~~~~L~~g~~~~~~Y~~lL~~ly~VY~aLE~al~~----~~~p~-l~~f~ 150 (286)
.+.+++|+..+..+=.++ -+ .||+..|..|.++++.|+.+|.|=|..-...=+++.. +.++. ...+.
T Consensus 9 ~~~~~~l~~~~~~~w~~~-----~~---HPFv~~l~~GtL~~~~f~~YL~QDy~yl~~f~r~~a~~~~ka~~~~~~~~l~ 80 (221)
T 2gm8_A 9 HGVTGELRRRADGIWQRI-----LA---HPFVAELYAGTLPMEKFKYYLLQDYNYLVNFAKALSLAASRAPSVDLMKTAL 80 (221)
T ss_dssp SSHHHHHHHHTHHHHHHH-----HT---CHHHHHHHHTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSHHHHHHHH
T ss_pred chHHHHHHHHhHHHHHHH-----HC---CHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHH
Confidence 467889999999988877 66 8999999999999999999999988776666665554 22221 00000
Q ss_pred ---ccccccHHHHHHHHHHhhhcCC---CCCCCCCchhHHHHHHHHhhcc-CccchHhHHHHHHhhhchhhHHHHHHHHH
Q 023201 151 ---NTGLERSEKLAKDLEWFKEQGY---TIPEPSSPGISYVQYLEELSEK-DPQAFICHFYNIYFAHSAGGRMIGKKVAE 223 (286)
Q Consensus 151 ---~p~L~Rt~aL~~DL~~l~g~~w---~~~~p~pa~~~Yv~~I~~la~~-~P~~LlAh~YvrYlGdlsGGQiI~~~la~ 223 (286)
..-+..--.+-+++..-.|-+. +..+|+|+|.+|++++..++.. ++..+++-.+.-+-+- .-|++++.+
T Consensus 81 ~~~~~~i~~E~~lh~~~~~~~Gi~~~~~~~~~~~p~t~aY~~~l~~~a~~~~~~~~laAl~pc~~~Y----~~ig~~l~~ 156 (221)
T 2gm8_A 81 ELAYGTVTGEMANYEALLKEVGLSLRDAAEAEPNRVNVSYMAYLKSTCALEGFYQCMAALLPCFWSY----AEIAERHGG 156 (221)
T ss_dssp HHHHHHHHTHHHHHHHHHHHTTCCHHHHHHSCCCHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHH----HHHHHHHGG
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHHhhCCCChHHHHHHHHHHHHHhcCCHHHHHHHHHhHHHHH----HHHHHHHHh
Confidence 0001111122222221123222 1368899999999999998754 6666666666553221 224444433
Q ss_pred HhcCCCCccccc-c---cCC--hhHHHHHHHHHHHhh
Q 023201 224 KILGGKELEFYK-W---DGE--LPKLLQNVRDKLNKV 254 (286)
Q Consensus 224 ~~L~~~gl~FY~-F---~gd--~~~~k~~yr~~Ld~l 254 (286)
..-...+ +.|. | +++ -.+.-+..++.+|++
T Consensus 157 ~~~~~~~-~~y~~Wi~~y~~~~f~~~v~~~~~lld~~ 192 (221)
T 2gm8_A 157 KLRENPV-HVYKKWASVYLSPEYRGLVERLRAVLDSS 192 (221)
T ss_dssp GGGGCCC-HHHHHHHHHHHSHHHHHHHHHHHHHHHTS
T ss_pred ccCCCCC-chHHHHHHHhCCHHHHHHHHHHHHHHHHh
Confidence 3211112 2222 2 222 245566677778876
No 26
>3hlx_A Pyrroloquinoline-quinone synthase; PQQC, PQQ biosynthesis, oxidase, complex, all helical, oxido; HET: PQQ; 1.30A {Klebsiella pneumoniae subsp} SCOP: a.132.1.4 PDB: 3hml_A* 1otv_A 3hnh_A* 1otw_A*
Probab=95.71 E-value=0.13 Score=46.68 Aligned_cols=192 Identities=10% Similarity=-0.015 Sum_probs=101.7
Q ss_pred CCchhHHHHHHHHHHHHhHHhhhhhcccccCCcccccccCCCCCHHHHHHHHHHHHHHHHHHHH----HHHhCCCCcccc
Q 023201 73 GEAKGFVEEMRFVAMKLHTKEQAREGEKEVKEPEERPVTKWEPTVDGYLRFLVDSKLVYDTLEG----IIEKAPFPSYAE 148 (286)
Q Consensus 73 ~~~~~Ls~~LR~~Tr~~H~~a~a~~~ek~~~s~~~~~L~~g~~~~~~Y~~lL~~ly~VY~aLE~----al~~~~~p~l~~ 148 (286)
-....|+++||+.....|. + .||...+..|.++++.+..++.|-|+.=..+=. ++.++.++....
T Consensus 7 ~~~~~F~~~Lr~~~~~~~~--------~---HPF~~~l~~G~L~~e~~r~yv~qdy~Yl~~f~r~~A~i~ak~~d~e~rr 75 (258)
T 3hlx_A 7 LSPQAFEEALRAKGDFYHI--------H---HPYHIAMHNGNATREQIQGWVANRFYYQTTIPLKDAAIMANCPDAQTRR 75 (258)
T ss_dssp CCHHHHHHHHHHGGGGSGG--------G---SHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCHHHHH
T ss_pred CCHHHHHHHHHHHhHHHHc--------C---ChHHHHHhcCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCHHHHH
Confidence 3447899999999987774 3 799999999999999999999874422222222 222233332211
Q ss_pred ccccc---------cccHHHHHHHHHHhhhcCCC---CCC-CCCchhHHHHHHHHhhc-cCccchHhHHHHHHhhhchhh
Q 023201 149 FRNTG---------LERSEKLAKDLEWFKEQGYT---IPE-PSSPGISYVQYLEELSE-KDPQAFICHFYNIYFAHSAGG 214 (286)
Q Consensus 149 f~~p~---------L~Rt~aL~~DL~~l~g~~w~---~~~-p~pa~~~Yv~~I~~la~-~~P~~LlAh~YvrYlGdlsGG 214 (286)
+.... ...=..+-.++..-+|.+.+ ..+ ++|.|+.|+++.-..+. .++...+|-.+ | -.-+.
T Consensus 76 ~l~~ni~~eeg~~~~~~hiel~~~fa~alGis~eel~~~~~~~P~t~~~vdaY~~~a~~~s~~e~vAA~L--~--E~~~p 151 (258)
T 3hlx_A 76 KWVQRILDHDGSHGEDGGIEAWLRLGEAVGLSRDDLLSERHVLPGVRFAVDAYLNFARRACWQEAACSSL--T--ELFAP 151 (258)
T ss_dssp HHHHHHHHHHCSSSSCHHHHHHHHHHHHTTCCHHHHHTCCSCCHHHHHHHHHHHHHHHHSCHHHHHHGGG--G--GGTHH
T ss_pred HHHHHHHHHhcccCCccHHHHHHHHHHHcCCCHHHHhhCCCCCcHHHHHHHHHHHHHhcCCHHHHHHHHH--H--HHHHH
Confidence 11000 00111222333333454442 445 68999755555544443 35555666654 3 44566
Q ss_pred HHHHHHHH---HHh-c-CCCCcccccccC--ChhHHHHHHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 023201 215 RMIGKKVA---EKI-L-GGKELEFYKWDG--ELPKLLQNVRDKLNKVAESWTREEKNRCLEETELSFKHSGEILR 282 (286)
Q Consensus 215 QiI~~~la---~~~-L-~~~gl~FY~F~g--d~~~~k~~yr~~Ld~l~~~l~~eek~~iI~EA~~aF~ln~~i~~ 282 (286)
++.+.++. +.| + +.+|+.||+-.- -..+..-...-.++.. -|+++++++++.....=++--..++
T Consensus 152 ~i~~~r~~~~~~~y~~i~~~~l~yF~~h~~~a~~D~~hal~~vl~~~---~t~e~q~~a~~a~~~~~~~lw~~lD 223 (258)
T 3hlx_A 152 QIHQSRLDSWPQHYPWIKEEGYFFFRSRLSQANRDVEHGLALAKAYC---DSAEKQNRMLEILQFKLDILWSMLD 223 (258)
T ss_dssp HHHHHHHHHHHHHCTTSCGGGGHHHHHHHHHHHHHHHHHHHHHHHHC---CSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhcHHHhCCCCChhHHHHHHHHhhcccccHHHHHHHHHHHc---CCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66654432 333 2 445677755221 0001111112224443 5899999888876655444443333
No 27
>1wwm_A Hypothetical protein TT2028; TENA/THI-4 family, putative transctiption activator, structu genomics; 2.61A {Thermus thermophilus} SCOP: a.132.1.3
Probab=90.93 E-value=1.6 Score=36.89 Aligned_cols=156 Identities=14% Similarity=0.063 Sum_probs=79.8
Q ss_pred HHHHHHHHHHHHhHHhhhhhcccccCCcccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHh----CCCCccccccccc
Q 023201 78 FVEEMRFVAMKLHTKEQAREGEKEVKEPEERPVTKWEPTVDGYLRFLVDSKLVYDTLEGIIEK----APFPSYAEFRNTG 153 (286)
Q Consensus 78 Ls~~LR~~Tr~~H~~a~a~~~ek~~~s~~~~~L~~g~~~~~~Y~~lL~~ly~VY~aLE~al~~----~~~p~l~~f~~p~ 153 (286)
|+++|++....+=++. -+ .|| .++++.+..+|.|=|..-...=+++.. +.++....+. .
T Consensus 4 ~~~~L~~~~~~~w~~~-----~~---HpF-------tL~~~~f~~Yl~QD~~yL~~f~r~~a~~~~ka~~~~~~~~~-~- 66 (190)
T 1wwm_A 4 LGLDLLKEVPGLLEEI-----KA---LPL-------RLDEERFRFWLQQDYPFVEALYRYQVGLLLEAPQAHRAPLV-Q- 66 (190)
T ss_dssp -------CCSSHHHHH-----HH---CCC-------CCCHHHHHHHHHTTHHHHHHHHHHHHHHHHHCCHHHHHHHH-H-
T ss_pred HHHHHHHhHHHHHHHH-----HC---CCC-------CCCHHHHHHHHHHhHHHHHHHHHHHHHHHHcCChHHHHHHH-H-
Confidence 5677777777666666 45 566 788999999999888766655555543 2222100000 0
Q ss_pred cccHHHHHHHHHHhhhcCC-CCCCCCCchhHHHHHHHHhhccCccchHhHHHHHHhhhchhhHHHHHHHHHHhcCCCCcc
Q 023201 154 LERSEKLAKDLEWFKEQGY-TIPEPSSPGISYVQYLEELSEKDPQAFICHFYNIYFAHSAGGRMIGKKVAEKILGGKELE 232 (286)
Q Consensus 154 L~Rt~aL~~DL~~l~g~~w-~~~~p~pa~~~Yv~~I~~la~~~P~~LlAh~YvrYlGdlsGGQiI~~~la~~~L~~~gl~ 232 (286)
-...+.....++...+- ...+|+|+|.+|++++.+++..+...+++..+.-+-+= .-|++++. + .+ +
T Consensus 67 --~~~~~~~E~~~~~~~gi~~~~~~~p~~~aY~~~l~~~a~~~~~~~~aAl~pc~~~Y----~~ig~~l~----~-~~-~ 134 (190)
T 1wwm_A 67 --ALMATVEELDWLLLQGASPSAPVHPVRAGYIALLEEMGRLPYAYRVVFFYFLNGLF----LEAWAHHV----P-EE-G 134 (190)
T ss_dssp --HHHHHHHHHHHHHTTTCCSSSCCCHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHH----HHHHHHHS----C-SS-S
T ss_pred --HHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHH----HHHHHHhc----c-CC-c
Confidence 00111111334322111 14678899999999999988744444444433332111 22223332 1 11 2
Q ss_pred ccc-c---cC--ChhHHHHHHHHHHHhhccCCCHHH
Q 023201 233 FYK-W---DG--ELPKLLQNVRDKLNKVAESWTREE 262 (286)
Q Consensus 233 FY~-F---~g--d~~~~k~~yr~~Ld~l~~~l~~ee 262 (286)
.|. | ++ +-...-+..++.+|++++..++++
T Consensus 135 ~y~~WI~~y~~~~f~~~v~~~~~~ld~~~~~~~~~~ 170 (190)
T 1wwm_A 135 PWAELSQHWFAPEFQAVLYDLEVLARGLWEDLDPEV 170 (190)
T ss_dssp HHHHHHHHHSCTTHHHHHHHHHHHHHHHHTTSCHHH
T ss_pred HHHHHHHhhCCHHHHHHHHHHHHHHHHHHHhCCHHH
Confidence 222 2 12 334556677888999876677665
No 28
>3b5o_A CADD-like protein of unknown function; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2, oxidoreductase; HET: MSE; 1.35A {Nostoc punctiforme} PDB: 3b5p_A*
Probab=84.32 E-value=2.9 Score=37.64 Aligned_cols=173 Identities=13% Similarity=0.076 Sum_probs=98.7
Q ss_pred CcccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHhC-C------CC------------ccccccccccccHHHHHHHH
Q 023201 104 EPEERPVTKWEPTVDGYLRFLVDSKLVYDTLEGIIEKA-P------FP------------SYAEFRNTGLERSEKLAKDL 164 (286)
Q Consensus 104 s~~~~~L~~g~~~~~~Y~~lL~~ly~VY~aLE~al~~~-~------~p------------~l~~f~~p~L~Rt~aL~~DL 164 (286)
.||...+.. .|.+.-+.++.|++.+=+.|=..+... + .+ .++. ..++..=...+++=|
T Consensus 27 hP~l~~~~~--a~~~ql~~f~~Q~s~F~ryL~~l~~~~~~~l~~~~~~~~~~eL~~NL~EE~G~-~d~~~~H~~lyRr~L 103 (244)
T 3b5o_A 27 NPVVQMLSQ--ASFAQIAYVMQQYSIFPKELVGFTELARRKALGAGWNGVAQELQENIDEEMGS-TTGGISHYTLLADGL 103 (244)
T ss_dssp CTTGGGTTT--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTT-TTTTCCHHHHHHHHH
T ss_pred CHHHHHHHh--ccHHHHHHHHHHHHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHHHhCC-CCCCCchHHHHHHHH
Confidence 466666665 356666778888774433332222210 0 01 1111 112233344455555
Q ss_pred H-HhhhcCCCCCCCCCchhHHHHHHHHhhccCccchHhHHHHHHhhhchhhHHHHHHHHHHh----cCCCCccccccc-C
Q 023201 165 E-WFKEQGYTIPEPSSPGISYVQYLEELSEKDPQAFICHFYNIYFAHSAGGRMIGKKVAEKI----LGGKELEFYKWD-G 238 (286)
Q Consensus 165 ~-~l~g~~w~~~~p~pa~~~Yv~~I~~la~~~P~~LlAh~YvrYlGdlsGGQiI~~~la~~~----L~~~gl~FY~F~-g 238 (286)
+ .+ |-+++...|+|+|+.|++.+.++...+|...+|-.|-- ++---=+-.+-+.+.+.+ ++.+.+.||++. .
T Consensus 104 ~~~l-Gld~~~~~p~~sT~~~idt~~~lcs~d~~~aLGA~yat-E~iaipe~~ly~~li~gL~~~~~~~~~l~FF~~Hid 181 (244)
T 3b5o_A 104 EEGL-GVAVKNTMPSVATSKLLRTVLSLFDRQVDYVLGATYAI-EATSIPELTLIVKLVEWLHEGAIPKDLQYFFSKHLD 181 (244)
T ss_dssp HHHH-CCCCTTCCCCHHHHHHHHHHHHHHTSCHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHCSSCCCHHHHHHHHHHHC
T ss_pred HHhc-CCCccccCCCchHHHHHHHHHHHhCCCHHHHHHHHHHH-hhhhhhHHHHHHHHHHHHHhCCCchhHHHHHHHHhh
Confidence 5 44 77776668999999999999999866888888887744 332111211222333333 233456898886 2
Q ss_pred -ChhHHHHHHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q 023201 239 -ELPKLLQNVRDKLNKVAESWTREEKNRCLEETELSFKHSGEILRLI 284 (286)
Q Consensus 239 -d~~~~k~~yr~~Ld~l~~~l~~eek~~iI~EA~~aF~ln~~i~~ei 284 (286)
....=.+..+..++.. .+++++.++++.+..+-+....+...|
T Consensus 182 elE~~Ha~~l~~~l~~~---~~~eef~~~~~G~~~~Lda~~~fWdgL 225 (244)
T 3b5o_A 182 EWEIEHEAGLRTSVAAY---IQPEEFGEFAAGFRAMIDAMQVWWQEL 225 (244)
T ss_dssp -------CHHHHHHHTT---CCGGGHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHH---HhhHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 2244455667777776 566778899998888887777766655
No 29
>1u7k_A GAG polyprotein; capsid, viral protein; 1.85A {Endogenous} SCOP: a.73.1.1 PDB: 2y4z_A 3bp9_A
Probab=38.18 E-value=32 Score=28.00 Aligned_cols=27 Identities=30% Similarity=0.377 Sum_probs=22.4
Q ss_pred HHHHHHHHHhhccCCCHHHHHHHHHHHHHH
Q 023201 244 LQNVRDKLNKVAESWTREEKNRCLEETELS 273 (286)
Q Consensus 244 k~~yr~~Ld~l~~~l~~eek~~iI~EA~~a 273 (286)
|+....-|..+ ||.|||++|+.||.+.
T Consensus 52 W~D~qqLL~tL---lT~EEr~ril~eArk~ 78 (131)
T 1u7k_A 52 WDDCQQLLGTL---LTGEEKQRVLLEARKA 78 (131)
T ss_dssp HHHHHHHHHHH---SCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHH---cCHHHHHHHHHHHHHH
Confidence 55556778887 9999999999999865
No 30
>3mb2_B 4-oxalocrotonate tautomerase family enzyme - beta; trans-3-chloroacrylic acid dehalogenase, CAAD, dehalogenase, hydrolase; 2.41A {Chloroflexus aurantiacus}
Probab=26.50 E-value=53 Score=24.04 Aligned_cols=20 Identities=20% Similarity=0.202 Sum_probs=17.8
Q ss_pred cCCCHHHHHHHHHHHHHHHH
Q 023201 256 ESWTREEKNRCLEETELSFK 275 (286)
Q Consensus 256 ~~l~~eek~~iI~EA~~aF~ 275 (286)
++.|.|+|.++++|+..+|.
T Consensus 11 ~pRT~EQKralaeE~T~if~ 30 (72)
T 3mb2_B 11 RPPDRTRKQAFAAEASAIFQ 30 (72)
T ss_dssp SCCCHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHH
Confidence 47899999999999998875
No 31
>1l6x_B Minimized B-domain of protein A Z34C; IGG1 FC, FC complex, immune system; HET: NAG BMA MAN GAL FUL; 1.65A {Homo sapiens} SCOP: k.13.1.1 PDB: 1oqo_C* 1oqx_C* 1zdc_A 1zdd_A
Probab=20.51 E-value=1.6e+02 Score=18.43 Aligned_cols=26 Identities=12% Similarity=0.235 Sum_probs=19.9
Q ss_pred HHHHHHHHHhhccCCCHHHHHHHHHHHH
Q 023201 244 LQNVRDKLNKVAESWTREEKNRCLEETE 271 (286)
Q Consensus 244 k~~yr~~Ld~l~~~l~~eek~~iI~EA~ 271 (286)
-++|.+.|.-- +||+++|+..|+--+
T Consensus 6 QnaFYevLh~~--nLtEeQrn~yI~slk 31 (34)
T 1l6x_B 6 QRRFYEALHDP--NLNEEQRNAKIKSIR 31 (34)
T ss_dssp HHHHHHHHHCT--TCCHHHHHHHHHHHH
T ss_pred HHHHHHHHcCC--CCCHHHHHhHHHHHh
Confidence 35677888776 799999999887543
Done!