Citrus Sinensis ID: 023205

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280------
Protein Sequence
MRTIVSRLINSRSSVSRLSAITASGNGRYLSTDSNKVDEPLKVEEAETVNVPPPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLTRYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDPVFPPGIVDVHGILRYSQKSR
Secondary Structure (PSIPRED)
cHHHHHHHHHccccccccccEEEccccEEEcccccccccccccccccccccccccccEEEEEccccHHHHHHHHHHHHccccEEEEEccccccccccccccEEEEEEccccHHHHHHHcccccEEEEccccccccHHHHHHHHHHHHHHHHHHHHccccEEEEEcccccccccccccHHHHHHHHHHHHHHHHccccEEEEccccEEccccccccccHHHHHccHHHHHHHHcccccccccccccccccccHHHHHHHHHHHcccccccccEEEccccHHcccccc
Secondary Structure Prediction (SSPRO)
cccHHHHHHccccccccHHHEEEccccccccccccccccccccEEcEEcccccccccEEEEEccccHHHHHHHHHHHHcccEEEEEEccccccccccHHccEEEEEcccccHHHHHHHHccccEEEEEEEEEccccHHHHccHHHHHHHHHHHHHccccEEEEEEcccccccccccHHHHHHHHHHHHHHHHHccccEEEEEccEEEcccccccccccHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHccccccccEEEHHHHHHHHHHcc
Coil and Loop (DISEMBL)
MRTIVSRLINSRSSVSRLSAITasgngrylstdsnkvdeplkveeaetvnvppppsekllvlggngfvgsHICREALDRGLTVASLSrsgrsslrdswANNVIWhqgnllssdsWKEALDGVTAVISCvggfgsnsymYKINGTANINAIRAASEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELltrypyggvilrpgfiygtrtvggmklplgvigspmeMVLQhakplsqlplvgplftppvnVTVVAKVAVraatdpvfppgivdvhGILRYSQKSR
Flexible Loop (DISEMBL)
MRTIVSRlinsrssvsrlsaitasgngrylstdsnkvdeplkveeaetvnvppppsEKLLVLGGNGFVGSHICREALDRGLTVASLSRsgrsslrdswANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLTRYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRaatdpvfppgivdvHGILRYSQKSR
Low Complexity Region (SEG)
MRTIVSRLINSRSSVSRLSAITASGNGRYLSTDSNKVDEPLKVEEAETVNVPPPPSEKLLVLGGNGFVGSHICREALDRGLTVAslsrsgrsslrdsWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLTRYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPvnvtvvakvavraaTDPVFPPGIVDVHGILRYSQKSR
Disordered region (IsUnstruct)
**********************************************************LLVLGGNGFVGSHICREALDRGLTVASL*******LRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLTRYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDPVFPPGIVDVHGILRY*****
Disordered Region (DISOPRED)
*********************************************************KLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLTRYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDPVFPPGIVDVHGILRYSQK**
Disordered Region (DISEMBL)
MRTIVSRLINSRSSVSRLSAITASGNGRYLSTDSNKVDEPLKVEEAETVNVPPPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLTRYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDPVFPPGIVDVHGILRYSQKSR
Disordered Region (DISPRO)
***********RSSVSRLSAITASGNGRYLSTDSNKVDEPLKVEEAETVNVPPPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLTRYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDPVFPPGIVDVHGILRYSQKS*
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MRTIVSRLINSRSSVSRLSAITASGNGRYLSTDSNKVDEPLKVEEAETVNVPPPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLTRYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDPVFPPGIVDVHGILRYSQKSR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	286	2.2.26 [Sep-21-2011]
Q9FVR6	296	Uncharacterized protein A	no	no	0.800	0.773	0.444	3e-52
Q05892	277	Uncharacterized protein Y	yes	no	0.755	0.779	0.292	6e-16
O74482	276	Uncharacterized protein C	yes	no	0.772	0.800	0.256	3e-09
Q3ZBE9	356	Sterol-4-alpha-carboxylat	yes	no	0.377	0.303	0.296	5e-07
P51238	319	Uncharacterized protein y	N/A	no	0.367	0.329	0.339	3e-06
Q5PPL3	362	Sterol-4-alpha-carboxylat	yes	no	0.370	0.292	0.284	3e-06
Q9P5L2	242	Protein fmp-52, mitochond	N/A	no	0.520	0.615	0.297	4e-06
Q1XDP9	319	Uncharacterized protein y	N/A	no	0.367	0.329	0.339	5e-06
O78472	314	Uncharacterized protein y	yes	no	0.377	0.343	0.321	6e-06
Q15738	373	Sterol-4-alpha-carboxylat	yes	no	0.440	0.337	0.258	8e-06

>sp|Q9FVR6|Y1222_ARATH Uncharacterized protein At1g32220, chloroplastic OS=Arabidopsis thaliana GN=At1g32220 PE=1 SV=1

 Score =  205 bits (522), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 105/236 (44%), Positives = 148/236 (62%), Gaps = 7/236 (2%)

Query: 56  SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSW 115
           SE+++VLGGNGFVGS IC+ A+  G+ V S+SRSGR +  DSW + V W  G++   + W
Sbjct: 62  SERVVVLGGNGFVGSAICKAAISNGIEVVSVSRSGRPNFEDSWLDQVTWVTGDVFYLN-W 120

Query: 116 KEALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGVANYL 175
            E L G TAV+S +GGFG+   M +ING AN+ A+ AA + GV +FV I+  D+ +  ++
Sbjct: 121 DEVLLGATAVVSTIGGFGNEEQMKRINGEANVTAVNAAKDFGVPKFVLITVHDYNLPPFI 180

Query: 176 L-QGYYEGKRAAETELLTRYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHA- 233
           L  GY+ GKR AE ELL++YP  GV+LRPGFIYG R V G+++PL ++G P++ +   A 
Sbjct: 181 LSNGYFTGKRNAEAELLSKYPTSGVVLRPGFIYGKRKVNGIEVPLDLVGEPLDKIYDSAE 240

Query: 234 ---KPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDPVFPPGIVDVHGILRYSQKSR 286
              +PL  LP    +  PPVNV  +A   + A  D  F  GI  +  I   + K R
Sbjct: 241 RFIRPLRSLPASDLILAPPVNVDDLALAVINAVKDDDF-FGIFTIEQIKEAAAKMR 295

Arabidopsis thaliana (taxid: 3702)

>sp|Q05892|YL290_YEAST Uncharacterized protein YLR290C, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YLR290C PE=1 SV=1

 Score = 84.7 bits (208), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 82/280 (29%), Positives = 125/280 (44%), Gaps = 64/280 (22%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTVASLSRSGRS----SLRD-SWANNVIWHQGNLLSS 112
           KL+V GGNGF+G  IC+EA+  G  V S+SRSG++     L D  W   V W   ++   
Sbjct: 4   KLIVFGGNGFLGKRICQEAVTSGYQVVSVSRSGKAPHSNELNDKQWMQEVQWTAADIFKP 63

Query: 113 DSWKEALDGVTAVISCVGGFGSN-SYMYKINGT-------------ANINAIRAAS---- 154
           DS+ E L+  T V+  +G    N +Y   ++ +             A  N ++ +S    
Sbjct: 64  DSYHELLNNATNVVHSLGILLENENYKQTLSKSPTYDSKSRLLSFGAGPNPLKKSSPYFT 123

Query: 155 ----------------------------EKGVKR-FVYISAADFGVANYLLQGYYEGKRA 185
                                       EK  +R F YIS AD G    +  GY   KR 
Sbjct: 124 YEMMNKQSAIILADTFKQKILKKSKKEQEKANQRSFTYIS-ADKGFP-LIPSGYINSKRE 181

Query: 186 AETEL--LTRYPYGGVILRPGFIYGT-RTVGGMKLPLGVIGSPMEMVLQHAKPL--SQLP 240
           AE EL  + RY +  +I+RPGF++   R   G   P   I + +E++    K L  ++L 
Sbjct: 182 AEIELEKMQRY-FRPIIVRPGFMFDEHRNAIG---PRSFIHTALELLYCGNKFLLRNKLQ 237

Query: 241 LVGPLFTPPVNVTVVAKVAVRAATDPVFPPGIVDVHGILR 280
           L+  L  P V+   V+K  ++   +P F  G+V +  IL+
Sbjct: 238 LLNDLIRPTVSTQQVSKSVLKNIENPDF-KGVVTLEEILK 276

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

>sp|O74482|YQJ9_SCHPO Uncharacterized protein C1840.09 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC1840.09 PE=3 SV=1

 Score = 62.8 bits (151), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 72/281 (25%), Positives = 112/281 (39%), Gaps = 60/281 (21%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSL--RDSWANNVIWHQGNLLSS-DS 114
           K++VLGG+GF+G +IC+ A+ +G  V S+SR G   L  ++ W ++V W   +     +S
Sbjct: 2   KIVVLGGSGFLGHNICKLAIAKGYEVVSVSRRGAGGLHNKEPWMDDVEWETLDAQKDPNS 61

Query: 115 WKEALDGVTAVISCVGGFGSNSY---------------------MYK------------- 140
               L   +AV++ VG    N+Y                     M+K             
Sbjct: 62  LLPVLRDASAVVNSVGILMENNYKKILQNPRGPVSHLINSLSSNMFKTGQNPLAPKPEEA 121

Query: 141 -----------INGTANINAIRAASEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETE 189
                      IN    I   + A++  V  + Y+SA     A  L   Y + KR AE E
Sbjct: 122 KQSKNKVTFEAINRDLAIETAKIAAKANVPVYCYVSA--HAAAPGLDPRYIKTKREAERE 179

Query: 190 LLTRYPYGGVILRPGFIY--GTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFT 247
           +        + LRPGF+Y    R   G    L  + S +      A     L  +G    
Sbjct: 180 ISKISNLRSIFLRPGFMYNFNDRPFTGALASLFTVSSSINRATSGA-----LNFLGTASA 234

Query: 248 PPVNVTVVAKVAVRAATDPVF--PPGIVDVHGIL-RYSQKS 285
            P+    VA  A+ A +DP    P  I ++  +  ++ QKS
Sbjct: 235 EPLPSEEVALAALEAISDPSVKGPVEISELKSMAHKFKQKS 275

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|Q3ZBE9|NSDHL_BOVIN Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating OS=Bos taurus GN=NSDHL PE=2 SV=1

 Score = 55.5 bits (132), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 55/118 (46%), Gaps = 10/118 (8%)

Query: 54  PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWAN-NVIWHQGNLLSS 112
           P +++  V+GG GF+G H+  + L RG  V          +R  + N  V +  G+L S 
Sbjct: 18  PKAKRCTVIGGCGFLGQHMVEQLLARGYAVNVF------DIRQGFDNPRVQFFLGDLCSQ 71

Query: 113 DSWKEALDGVTAVISCVG--GFGSNSYM-YKINGTANINAIRAASEKGVKRFVYISAA 167
                AL GV+ V  C     F +N  + Y++N     N I    E GV++ +  S+A
Sbjct: 72  QDLYPALKGVSTVFHCASPPPFNNNKELFYRVNYIGTKNVIETCKEAGVQKLILTSSA 129

Bos taurus (taxid: 9913)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 7

EC: 0

>sp|P51238|YCF39_PORPU Uncharacterized protein ycf39 OS=Porphyra purpurea GN=ycf39 PE=3 SV=1

 Score = 52.8 bits (125), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 37/109 (33%), Positives = 55/109 (50%), Gaps = 4/109 (3%)

Query: 59  LLVLGGNGFVGSHICREALDRGLTVASLSRSGR-SSLRDSWANNVIWHQGNLLSSDSWKE 117
           LLV+G  G +G  I R ALD G  V  + R+ R S+    W   +++  G+L   +S  +
Sbjct: 3   LLVIGATGTLGRQIVRRALDEGYNVKCMVRNLRKSAFLKEWGAELVY--GDLKLPESILQ 60

Query: 118 ALDGVTAVISCVGGFGSNSY-MYKINGTANINAIRAASEKGVKRFVYIS 165
           +  GVTAVI       S+ Y   +I+    I  I AA    V+RF++ S
Sbjct: 61  SFCGVTAVIDASTSRPSDPYNTEQIDLDGKIALIEAAKAAKVQRFIFFS 109

Porphyra purpurea (taxid: 2787)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|Q5PPL3|NSDHL_RAT Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating OS=Rattus norvegicus GN=Nsdhl PE=2 SV=1

 Score = 52.8 bits (125), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 33/116 (28%), Positives = 52/116 (44%), Gaps = 10/116 (8%)

Query: 56  SEKLLVLGGNGFVGSHICREALDRGLTVASLS-RSGRSSLRDSWANNVIWHQGNLLSSDS 114
           ++K  V+GG+GF+G H+  + L RG  V     R G  + R      V +  G+L +   
Sbjct: 26  AKKCTVIGGSGFLGQHMVEQLLSRGYAVNVFDVRQGFDNPR------VQFFIGDLCNQQD 79

Query: 115 WKEALDGVTAVISCV---GGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAA 167
              AL GV+ V  C        +    Y++N T     I    E GV++ +  S+A
Sbjct: 80  LYPALKGVSTVFHCASPPSNSNNKELFYRVNSTGTKTVIETCKEAGVQKLILTSSA 135

Rattus norvegicus (taxid: 10116)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 7

EC: 0

>sp|Q9P5L2|FMP52_NEUCR Protein fmp-52, mitochondrial OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=fmp-52 PE=3 SV=1

 Score = 52.4 bits (124), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 47/158 (29%), Positives = 73/158 (46%), Gaps = 9/158 (5%)

Query: 61  VLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD 120
           ++G  G VGSHI    L    T + +    R +  +   ++ +    N  +S +W   L 
Sbjct: 11  LIGSTGLVGSHILSTLLTSPTTSSQVQTISRRAPANPTNSSRLSPTVNADTS-TWPTLLS 69

Query: 121 GV----TAVISCVG----GFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGVA 172
            +    T VIS +G      G  +  +KI+   N++  +AA + GVK FV+IS+A    A
Sbjct: 70  SLVPLPTTVISSLGTTRVAAGGIANQWKIDHDLNVDLAKAAKQAGVKNFVFISSAGTRGA 129

Query: 173 NYLLQGYYEGKRAAETELLTRYPYGGVILRPGFIYGTR 210
                 Y + KR  E  + +     G+ILRPG I G R
Sbjct: 130 LSTKVPYSQMKRGVEDTIQSLDFEHGIILRPGLILGER 167

Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) (taxid: 367110)

>sp|Q1XDP9|YCF39_PORYE Uncharacterized protein ycf39 OS=Porphyra yezoensis GN=ycf39 PE=3 SV=1

 Score = 52.0 bits (123), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 37/109 (33%), Positives = 54/109 (49%), Gaps = 4/109 (3%)

Query: 59  LLVLGGNGFVGSHICREALDRGLTVASLSRSGR-SSLRDSWANNVIWHQGNLLSSDSWKE 117
           LLV+G  G +G  I R ALD G  V  + R+ R S+    W   +I+  G+L   +S  +
Sbjct: 3   LLVIGATGTLGRQIVRRALDEGYNVKCMVRNLRKSAFLKEWGAELIY--GDLKLPESILQ 60

Query: 118 ALDGVTAVISCVGGFGSNSY-MYKINGTANINAIRAASEKGVKRFVYIS 165
           +  GVTA+I        + Y   KI+    I  I AA    V+RF++ S
Sbjct: 61  SFCGVTAIIDASTSRLPDPYNAEKIDLDGKIALIEAAKAAKVERFIFFS 109

Porphyra yezoensis (taxid: 2788)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|O78472|YCF39_GUITH Uncharacterized protein ycf39 OS=Guillardia theta GN=ycf39 PE=3 SV=1

 Score = 51.6 bits (122), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 55/112 (49%), Gaps = 4/112 (3%)

Query: 59  LLVLGGNGFVGSHICREALDRGLTVASLSRSGRSS-LRDSWANNVIWHQGNLLSSDSWKE 117
           LLV+G  G +G  I R ALD G  V+ L R+ R +     W   +++  G+L   ++   
Sbjct: 3   LLVIGATGTLGRQIVRRALDEGYEVSCLVRNLRKAYFLKEWGAELLY--GDLSLPETLPT 60

Query: 118 ALDGVTAVISCVGGFGSNSY-MYKINGTANINAIRAASEKGVKRFVYISAAD 168
            L  +TA+I       S+ Y   KI+    I  + AA   G+KRFV+ S  +
Sbjct: 61  NLTKITAIIDASTARPSDPYKAEKIDLEGKIALVEAAKVAGIKRFVFFSVLN 112

Guillardia theta (taxid: 55529)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|Q15738|NSDHL_HUMAN Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating OS=Homo sapiens GN=NSDHL PE=1 SV=2

 Score = 51.2 bits (121), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 37/143 (25%), Positives = 62/143 (43%), Gaps = 17/143 (11%)

Query: 29  YLSTDSNKVDEPLKVEEAETVNVPPPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSR 88
           +L+ D+ KV+       A+   V    +++  V+GG+GF+G H+  + L RG  V     
Sbjct: 17  HLTEDTPKVN-------ADIEKVNQNQAKRCTVIGGSGFLGQHMVEQLLARGYAVNVF-- 67

Query: 89  SGRSSLRDSWAN-NVIWHQGNLLSSDSWKEALDGVTAVISCVG---GFGSNSYMYKINGT 144
                ++  + N  V +  G+L S      AL GV  V  C        +    Y++N  
Sbjct: 68  ----DIQQGFDNPQVRFFLGDLCSRQDLYPALKGVNTVFHCASPPPSSNNKELFYRVNYI 123

Query: 145 ANINAIRAASEKGVKRFVYISAA 167
              N I    E GV++ +  S+A
Sbjct: 124 GTKNVIETCKEAGVQKLILTSSA 146

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 7

EC: 0

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	286
449441836	287	PREDICTED: uncharacterized protein At1g3	0.989	0.986	0.837	1e-137
224089442	288	predicted protein [Populus trichocarpa]	1.0	0.993	0.835	1e-134
225430578	287	PREDICTED: uncharacterized protein At1g3	0.989	0.986	0.848	1e-133
297811177	287	catalytic/ coenzyme binding protein [Ara	1.0	0.996	0.843	1e-133
224142023	287	predicted protein [Populus trichocarpa]	0.993	0.989	0.845	1e-130
18416362	287	Rossmann-fold NAD(P)-binding domain-cont	1.0	0.996	0.843	1e-130
255548648	281	conserved hypothetical protein [Ricinus	0.926	0.943	0.867	1e-126
10129651	301	putative protein [Arabidopsis thaliana]	0.989	0.940	0.782	1e-125
388507480	282	unknown [Lotus japonicus]	0.986	1.0	0.800	1e-124
356507149	287	PREDICTED: uncharacterized protein At1g3	0.989	0.986	0.833	1e-120

>gi|449441836|ref|XP_004138688.1| PREDICTED: uncharacterized protein At1g32220, chloroplastic-like [Cucumis sativus] gi|449493285|ref|XP_004159244.1| PREDICTED: uncharacterized protein At1g32220, chloroplastic-like [Cucumis sativus]

 Score =  494 bits (1273), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 237/283 (83%), Positives = 260/283 (91%)

Query: 1   MRTIVSRLINSRSSVSRLSAITASGNGRYLSTDSNKVDEPLKVEEAETVNVPPPPSEKLL 60
           M + +SRLI+SRSS  +L  + AS  GR  STDSNK+DEP KVEEAETVNVPPPP+EKLL
Sbjct: 1   MSSTLSRLIHSRSSFPKLYTMAASRGGRPFSTDSNKIDEPFKVEEAETVNVPPPPTEKLL 60

Query: 61  VLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD 120
           VLGGNGFVGSHIC+EAL+RGLTVASLSRSGRSS+RDSWANNVIWHQGNLLS DS  EA D
Sbjct: 61  VLGGNGFVGSHICQEALNRGLTVASLSRSGRSSIRDSWANNVIWHQGNLLSPDSLSEAFD 120

Query: 121 GVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGVANYLLQGYY 180
           GVTAVISC+GGFGSNS MYKINGTANINAIR AS+KGVKRFVYISAADFG+ANYLLQGYY
Sbjct: 121 GVTAVISCIGGFGSNSQMYKINGTANINAIRVASDKGVKRFVYISAADFGLANYLLQGYY 180

Query: 181 EGKRAAETELLTRYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLP 240
           EGKRAAETELLT++PYGGVILRPGFIYGTR VG MKLPLG+IGSP+EMVLQHAKPL QLP
Sbjct: 181 EGKRAAETELLTKFPYGGVILRPGFIYGTRHVGSMKLPLGIIGSPLEMVLQHAKPLHQLP 240

Query: 241 LVGPLFTPPVNVTVVAKVAVRAATDPVFPPGIVDVHGILRYSQ 283
           LVGPLFTPPV+VT VA+V+VRAATDPVFPPGI+D++GI RYSQ
Sbjct: 241 LVGPLFTPPVSVTSVARVSVRAATDPVFPPGIIDIYGIQRYSQ 283

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224089442|ref|XP_002308721.1| predicted protein [Populus trichocarpa] gi|222854697|gb|EEE92244.1| predicted protein [Populus trichocarpa]

 Score =  482 bits (1241), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 239/286 (83%), Positives = 266/286 (93%)

Query: 1   MRTIVSRLINSRSSVSRLSAITASGNGRYLSTDSNKVDEPLKVEEAETVNVPPPPSEKLL 60
           M ++ SRLI+SR+S+S+L  +  S NGRYLSTDSNKVDEP KVEEAET+NVPPPP+EKLL
Sbjct: 1   MTSLTSRLIHSRTSLSKLYTMAVSSNGRYLSTDSNKVDEPFKVEEAETLNVPPPPTEKLL 60

Query: 61  VLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD 120
           VLGGNGFVGSHIC+EA+DRGLTVASLSRSGR S+++SW NNVIWHQGNLLSSDSW +AL+
Sbjct: 61  VLGGNGFVGSHICKEAVDRGLTVASLSRSGRPSIQESWVNNVIWHQGNLLSSDSWMQALN 120

Query: 121 GVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGVANYLLQGYY 180
           GVT+VISCVGGFGS SYMYKINGTANINAIRAASEKGVKRFVYISAADFG+ NYLLQGYY
Sbjct: 121 GVTSVISCVGGFGSQSYMYKINGTANINAIRAASEKGVKRFVYISAADFGLVNYLLQGYY 180

Query: 181 EGKRAAETELLTRYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLP 240
           EGK+AAETELLT++ YGGV+LRPGFIYGTR VG +KLPLGVIGSP+EMVLQHAKPL QLP
Sbjct: 181 EGKKAAETELLTKFAYGGVVLRPGFIYGTRNVGSVKLPLGVIGSPLEMVLQHAKPLKQLP 240

Query: 241 LVGPLFTPPVNVTVVAKVAVRAATDPVFPPGIVDVHGILRYSQKSR 286
           LVGPLFTPPV+VT V KVAVRAATDPVFPPGIVDV+GILRYSQ+ R
Sbjct: 241 LVGPLFTPPVSVTAVVKVAVRAATDPVFPPGIVDVYGILRYSQQQR 286

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225430578|ref|XP_002263819.1| PREDICTED: uncharacterized protein At1g32220, chloroplastic [Vitis vinifera] gi|296082186|emb|CBI21191.3| unnamed protein product [Vitis vinifera]

 Score =  481 bits (1239), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 240/283 (84%), Positives = 266/283 (93%)

Query: 1   MRTIVSRLINSRSSVSRLSAITASGNGRYLSTDSNKVDEPLKVEEAETVNVPPPPSEKLL 60
           M+TI+S+LI+SRSS+SR  A+ A  NGR LSTDSNKVDEPLKVEEAETV++PPPP+EKLL
Sbjct: 1   MKTIISQLIHSRSSLSRFYAMAAFRNGRCLSTDSNKVDEPLKVEEAETVDIPPPPTEKLL 60

Query: 61  VLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD 120
           VLGGNGFVGSHIC+EAL RG+ VASLSRSGRSS+ D WANN+ WH+GNLLSSDSWKEAL 
Sbjct: 61  VLGGNGFVGSHICKEALSRGIAVASLSRSGRSSINDPWANNIEWHRGNLLSSDSWKEALS 120

Query: 121 GVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGVANYLLQGYY 180
           GVT+VISCVGGFGS+SYMYKINGTANINAIRAA+EKGVKRFVYISAADFGVANYLLQGYY
Sbjct: 121 GVTSVISCVGGFGSSSYMYKINGTANINAIRAAAEKGVKRFVYISAADFGVANYLLQGYY 180

Query: 181 EGKRAAETELLTRYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLP 240
           EGKRAAETELLT++PYGGVILRPGFIYGTR VG MKLPLGVIGSP+EMVL+HAKPL+Q+P
Sbjct: 181 EGKRAAETELLTKFPYGGVILRPGFIYGTRQVGSMKLPLGVIGSPLEMVLKHAKPLNQVP 240

Query: 241 LVGPLFTPPVNVTVVAKVAVRAATDPVFPPGIVDVHGILRYSQ 283
           LVGPLFTPPVNV  VAKVAVRAATD VFPPGI+DV+GILRY+Q
Sbjct: 241 LVGPLFTPPVNVKSVAKVAVRAATDTVFPPGIIDVYGILRYTQ 283

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297811177|ref|XP_002873472.1| catalytic/ coenzyme binding protein [Arabidopsis lyrata subsp. lyrata] gi|297319309|gb|EFH49731.1| catalytic/ coenzyme binding protein [Arabidopsis lyrata subsp. lyrata]

 Score =  481 bits (1237), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 242/287 (84%), Positives = 267/287 (93%), Gaps = 1/287 (0%)

Query: 1   MRTIVSRLINSRSSVSRLSAITASGNGRYLSTDSNKVDEPLKVEEAETVNVPPPPSEKLL 60
           MRTIVSRLI  +SS+S++   +ASG GRYLSTDSNK+DEP  VEEAETV+VPPPP+EKLL
Sbjct: 1   MRTIVSRLIRYKSSLSQIRFASASGGGRYLSTDSNKIDEPFNVEEAETVHVPPPPTEKLL 60

Query: 61  VLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD 120
           VLGGNGFVGSH+C+EALDRGL+V+SLSRSG+SSL++SWA+ V WHQGNLLSSD  K+ALD
Sbjct: 61  VLGGNGFVGSHVCKEALDRGLSVSSLSRSGKSSLQESWASRVTWHQGNLLSSDLLKDALD 120

Query: 121 GVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGVANYLLQGYY 180
           GVT+VISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAADFG+ANYLL+GYY
Sbjct: 121 GVTSVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGLANYLLRGYY 180

Query: 181 EGKRAAETELLTRYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLP 240
           EGKRAAETELLTR+ YGG+ILRPGFIYGTR+VG MK+PLGV GSPMEMVLQ AKPL+QLP
Sbjct: 181 EGKRAAETELLTRFAYGGIILRPGFIYGTRSVGSMKIPLGVFGSPMEMVLQQAKPLNQLP 240

Query: 241 LVGPLFTPPVNVTVVAKVAVRAATDPVFPPGIVDVHGILRYS-QKSR 286
           LVGPLFTPPVNV  VAKVAVRAATDPVFPPGIVDVHGI RYS QKSR
Sbjct: 241 LVGPLFTPPVNVESVAKVAVRAATDPVFPPGIVDVHGIQRYSQQKSR 287

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224142023|ref|XP_002324359.1| predicted protein [Populus trichocarpa] gi|222865793|gb|EEF02924.1| predicted protein [Populus trichocarpa]

 Score =  471 bits (1213), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 240/284 (84%), Positives = 261/284 (91%)

Query: 1   MRTIVSRLINSRSSVSRLSAITASGNGRYLSTDSNKVDEPLKVEEAETVNVPPPPSEKLL 60
           M  + SRLI SR+S+S+L  I AS NGRYLSTDSNKVDEP KVEEAETVNVPPP +EKLL
Sbjct: 1   MTPLTSRLIQSRTSLSKLFTIAASRNGRYLSTDSNKVDEPFKVEEAETVNVPPPSTEKLL 60

Query: 61  VLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD 120
           VLGGNGFVGSHIC+EA+DRGLTVASLSRSGR S+ D+W NNVIWHQG+LLSS SW EAL+
Sbjct: 61  VLGGNGFVGSHICKEAVDRGLTVASLSRSGRPSIHDAWVNNVIWHQGSLLSSYSWTEALN 120

Query: 121 GVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGVANYLLQGYY 180
           GVT+VISCVGGFGS SYMYKINGTANINAIRAASEKGVKRFVYIS+ADFG+ANYLLQGYY
Sbjct: 121 GVTSVISCVGGFGSQSYMYKINGTANINAIRAASEKGVKRFVYISSADFGLANYLLQGYY 180

Query: 181 EGKRAAETELLTRYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLP 240
           EGK+AAETELLT++ YGGVILRPGFIYGTR VG +KLPLGVIGSP+EMVLQHAKPL QLP
Sbjct: 181 EGKKAAETELLTKFAYGGVILRPGFIYGTRNVGSVKLPLGVIGSPLEMVLQHAKPLKQLP 240

Query: 241 LVGPLFTPPVNVTVVAKVAVRAATDPVFPPGIVDVHGILRYSQK 284
           LVGPLFTPPVNVT VAKVAVRAATDPVFPPGI+DV GI RYSQ+
Sbjct: 241 LVGPLFTPPVNVTAVAKVAVRAATDPVFPPGIIDVSGIQRYSQQ 284

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18416362|ref|NP_568236.1| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana] gi|13926273|gb|AAK49607.1|AF372891_1 AT5g10730/MAJ23_90 [Arabidopsis thaliana] gi|16323238|gb|AAL15353.1| AT5g10730/MAJ23_90 [Arabidopsis thaliana] gi|19698949|gb|AAL91210.1| putative protein [Arabidopsis thaliana] gi|21387195|gb|AAM48001.1| unknown protein [Arabidopsis thaliana] gi|21536539|gb|AAM60871.1| unknown [Arabidopsis thaliana] gi|332004206|gb|AED91589.1| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana]

 Score =  471 bits (1213), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 242/287 (84%), Positives = 268/287 (93%), Gaps = 1/287 (0%)

Query: 1   MRTIVSRLINSRSSVSRLSAITASGNGRYLSTDSNKVDEPLKVEEAETVNVPPPPSEKLL 60
           MRTIVSRLI  +SS+S++  ++ASG GRYLSTDSNK+DEP  VEEAETV+VPPPP+EKLL
Sbjct: 1   MRTIVSRLIRYQSSLSQIRFVSASGGGRYLSTDSNKIDEPFNVEEAETVHVPPPPTEKLL 60

Query: 61  VLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD 120
           VLGGNGFVGSH+C+EALDRGL+V+SLSRSGRSSL++SWA+ V WHQGNLLSSD  K+AL+
Sbjct: 61  VLGGNGFVGSHVCKEALDRGLSVSSLSRSGRSSLQESWASRVTWHQGNLLSSDLLKDALE 120

Query: 121 GVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGVANYLLQGYY 180
           GVT+VISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAADFG+ANYLL+GYY
Sbjct: 121 GVTSVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGLANYLLRGYY 180

Query: 181 EGKRAAETELLTRYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLP 240
           EGKRAAETELLTR+ YGG+ILRPGFIYGTR+VG MK+PLGV GSPMEMVLQ AKPL+QLP
Sbjct: 181 EGKRAAETELLTRFAYGGIILRPGFIYGTRSVGSMKIPLGVFGSPMEMVLQQAKPLNQLP 240

Query: 241 LVGPLFTPPVNVTVVAKVAVRAATDPVFPPGIVDVHGILRYS-QKSR 286
           LVGPLFTPPVNV  VAKVAVRAATDPVFPPGIVDVHGI RYS QKSR
Sbjct: 241 LVGPLFTPPVNVESVAKVAVRAATDPVFPPGIVDVHGIQRYSQQKSR 287

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255548648|ref|XP_002515380.1| conserved hypothetical protein [Ricinus communis] gi|223545324|gb|EEF46829.1| conserved hypothetical protein [Ricinus communis]

 Score =  457 bits (1177), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 230/265 (86%), Positives = 252/265 (95%)

Query: 19  SAITASGNGRYLSTDSNKVDEPLKVEEAETVNVPPPPSEKLLVLGGNGFVGSHICREALD 78
           SA+ AS NGRYLSTDSNKVDEP KVEEAETVNVPPP +EKLLVLGGNGFVGSH+C+EALD
Sbjct: 13  SAVAASRNGRYLSTDSNKVDEPFKVEEAETVNVPPPAAEKLLVLGGNGFVGSHVCKEALD 72

Query: 79  RGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFGSNSYM 138
           RGL V SLSRSGRSS+RDSWAN V WHQG+LLS +SWKEAL+GV+AVISCVGGFGS+S+M
Sbjct: 73  RGLKVDSLSRSGRSSVRDSWANAVTWHQGDLLSPNSWKEALNGVSAVISCVGGFGSHSHM 132

Query: 139 YKINGTANINAIRAASEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLTRYPYGG 198
           YKINGTANINAIRAASEKGVKRFVYISAADFG+ANYLLQGYYEGKRAAETELLT++PYGG
Sbjct: 133 YKINGTANINAIRAASEKGVKRFVYISAADFGLANYLLQGYYEGKRAAETELLTKFPYGG 192

Query: 199 VILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKV 258
           +ILRPGFIYGTR VG +KLPLGVIGSPMEM+LQHAKPL+QLPLVGPLFTPPVNV  VAKV
Sbjct: 193 IILRPGFIYGTRNVGSVKLPLGVIGSPMEMLLQHAKPLNQLPLVGPLFTPPVNVNAVAKV 252

Query: 259 AVRAATDPVFPPGIVDVHGILRYSQ 283
           AVRAA+DPVFPPGI+DV+GILRY+Q
Sbjct: 253 AVRAASDPVFPPGIIDVYGILRYTQ 277

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|10129651|emb|CAC08247.1| putative protein [Arabidopsis thaliana]

 Score =  455 bits (1170), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 238/304 (78%), Positives = 261/304 (85%), Gaps = 21/304 (6%)

Query: 1   MRTIVSRLINSRSSVSRLSAIT-----------------ASGNGRYLSTDSNKVDEPLKV 43
           MRTIVSRLI  +SS+S++  +T                 ASG GRYLSTDSNK+DEP  V
Sbjct: 1   MRTIVSRLIRYQSSLSQIRYLTLALLFCAYGLCCIRFVSASGGGRYLSTDSNKIDEPFNV 60

Query: 44  EEAETVNVPPPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVI 103
           EEAETV+VPPPP+EKLLVLGGNGFVGSH+C+EALDRGL+V+SLSRS       SWA+ V 
Sbjct: 61  EEAETVHVPPPPTEKLLVLGGNGFVGSHVCKEALDRGLSVSSLSRSSLQE---SWASRVT 117

Query: 104 WHQGNLLSSDSWKEALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVY 163
           WHQGNLLSSD  K+AL+GVT+VISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVY
Sbjct: 118 WHQGNLLSSDLLKDALEGVTSVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVY 177

Query: 164 ISAADFGVANYLLQGYYEGKRAAETELLTRYPYGGVILRPGFIYGTRTVGGMKLPLGVIG 223
           ISAADFG+ANYLL+GYYEGKRAAETELLTR+ YGG+ILRPGFIYGTR+VG MK+PLGV G
Sbjct: 178 ISAADFGLANYLLRGYYEGKRAAETELLTRFAYGGIILRPGFIYGTRSVGSMKIPLGVFG 237

Query: 224 SPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDPVFPPGIVDVHGILRYS- 282
           SPMEMVLQ AKPL+QLPLVGPLFTPPVNV  VAKVAVRAATDPVFPPGIVDVHGI RYS 
Sbjct: 238 SPMEMVLQQAKPLNQLPLVGPLFTPPVNVESVAKVAVRAATDPVFPPGIVDVHGIQRYSQ 297

Query: 283 QKSR 286
           QKSR
Sbjct: 298 QKSR 301

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388507480|gb|AFK41806.1| unknown [Lotus japonicus]

 Score =  451 bits (1161), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 229/286 (80%), Positives = 259/286 (90%), Gaps = 4/286 (1%)

Query: 1   MRTIVSRLINSRSSVSRLSAITASGNGRYLSTDSNKVDEPLKVEEAETVNVPPPPSEKLL 60
           MRT+VSRLI+S   +SRL+A       R L T+ NKVDEP KVEEAETVNVPPPP+EKLL
Sbjct: 1   MRTLVSRLIHSTPPISRLNATAV----RNLCTEPNKVDEPFKVEEAETVNVPPPPTEKLL 56

Query: 61  VLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD 120
           VLGGNGFVGSH+CREAL+ GL+VASLSRSG+SSL DSWA +VIW++GNL S+DS KEAL+
Sbjct: 57  VLGGNGFVGSHVCREALNHGLSVASLSRSGKSSLHDSWATDVIWYKGNLFSTDSLKEALN 116

Query: 121 GVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGVANYLLQGYY 180
           GVTAVISCVGGFGSNSYMYKI+GTANINAIRAAS++GVKRFVYISAADFGV NYLLQGYY
Sbjct: 117 GVTAVISCVGGFGSNSYMYKIDGTANINAIRAASDQGVKRFVYISAADFGVVNYLLQGYY 176

Query: 181 EGKRAAETELLTRYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLP 240
           EGKRAAETELLTR+PYGGVILRPGFI+GTRT G MK+PLGVIGSP+EMVLQHAKPL+Q+P
Sbjct: 177 EGKRAAETELLTRFPYGGVILRPGFIHGTRTAGSMKIPLGVIGSPLEMVLQHAKPLTQIP 236

Query: 241 LVGPLFTPPVNVTVVAKVAVRAATDPVFPPGIVDVHGILRYSQKSR 286
           L+GPL TPPVNV  VAKVAVRAAT+PVFPPGI+DV+GI RYSQ+ +
Sbjct: 237 LIGPLLTPPVNVIAVAKVAVRAATEPVFPPGILDVYGIQRYSQQHK 282

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356507149|ref|XP_003522333.1| PREDICTED: uncharacterized protein At1g32220, chloroplastic-like [Glycine max]

 Score =  437 bits (1123), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 236/283 (83%), Positives = 260/283 (91%)

Query: 1   MRTIVSRLINSRSSVSRLSAITASGNGRYLSTDSNKVDEPLKVEEAETVNVPPPPSEKLL 60
           MRT++SRLI+S  S+SRL+A   S +GR L TDSNKVD P KVEEAETVNVPP P+EKLL
Sbjct: 1   MRTVISRLIHSTPSISRLNATVVSISGRNLCTDSNKVDGPFKVEEAETVNVPPLPTEKLL 60

Query: 61  VLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD 120
           VLGGNGFVGSHICREALDR L+VASLSRSGRSSL DSWA NV W++GNLLS+DS KEAL+
Sbjct: 61  VLGGNGFVGSHICREALDRDLSVASLSRSGRSSLHDSWATNVAWYKGNLLSTDSLKEALN 120

Query: 121 GVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGVANYLLQGYY 180
           GVTAVISCVGGFGSNSYMYKINGTANINAIRAAS++GVKRFVYISAADFGV NYLL+GYY
Sbjct: 121 GVTAVISCVGGFGSNSYMYKINGTANINAIRAASDQGVKRFVYISAADFGVVNYLLRGYY 180

Query: 181 EGKRAAETELLTRYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLP 240
           EGKRA+ETELLTR+PYGGVILRPGFIYGTR+VG MK+PLGVIGSP+EMVLQ AKPL+Q+P
Sbjct: 181 EGKRASETELLTRFPYGGVILRPGFIYGTRSVGSMKIPLGVIGSPLEMVLQVAKPLNQIP 240

Query: 241 LVGPLFTPPVNVTVVAKVAVRAATDPVFPPGIVDVHGILRYSQ 283
           LVGPL TPPVNVT VAKVAVRAATDPVFPPGI+D +GI RYSQ
Sbjct: 241 LVGPLLTPPVNVTAVAKVAVRAATDPVFPPGIIDAYGIQRYSQ 283

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	286
TAIR|locus:2159674	287	AT5G10730 [Arabidopsis thalian	1.0	0.996	0.763	9.1e-116
TAIR|locus:2146092	269	AT5G15910 [Arabidopsis thalian	0.926	0.985	0.485	1.3e-66
TAIR|locus:2031710	296	AT1G32220 [Arabidopsis thalian	0.800	0.773	0.389	2.8e-41
SGD|S000004281	277	YLR290C "Putative protein of u	0.255	0.263	0.320	2.1e-10
ASPGD|ASPL0000045253	287	AN1860 [Emericella nidulans (t	0.262	0.261	0.325	1.1e-08
UNIPROTKB|Q0C619	329	HNE_0090 "Putative NADH-quinon	0.524	0.455	0.314	1e-07
TIGR_CMR|SPO_3772	327	SPO_3772 "NADH ubiquinone oxid	0.520	0.455	0.310	2e-06
CGD|CAL0002191	266	orf19.7092 [Candida albicans (	0.314	0.338	0.244	2.4e-06
UNIPROTKB|Q5AFH6	266	CaO19.7092 "Putative uncharact	0.314	0.338	0.244	2.4e-06
UNIPROTKB|Q2GE21	340	NSE_0386 "NADH-ubiquinone oxid	0.513	0.432	0.272	5e-06

TAIR|locus:2159674 AT5G10730 [Arabidopsis thaliana (taxid:3702)]

 Score = 1141 (406.7 bits), Expect = 9.1e-116, P = 9.1e-116
 Identities = 219/287 (76%), Positives = 243/287 (84%)

Query:     1 MRTIVSRLINSRSSVSRLSAITASGNGRYLSTDSNKVDEPLKVEEAETVNVPPPPSEKLL 60
             MRTIVSRLI  +SS+S++  ++ASG GRYLSTDSNK+DEP  VEEAETV+VPPPP+EKLL
Sbjct:     1 MRTIVSRLIRYQSSLSQIRFVSASGGGRYLSTDSNKIDEPFNVEEAETVHVPPPPTEKLL 60

Query:    61 VLGGNGFVGSHICREALDRGLTVAXXXXXXXXXXXXXWANNVIWHQGNLLSSDSWKEALD 120
             VLGGNGFVGSH+C+EALDRGL+V+             WA+ V WHQGNLLSSD  K+AL+
Sbjct:    61 VLGGNGFVGSHVCKEALDRGLSVSSLSRSGRSSLQESWASRVTWHQGNLLSSDLLKDALE 120

Query:   121 GVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGVANYLLQGYY 180
             GVT+VISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAADFG+ANYLL+GYY
Sbjct:   121 GVTSVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGLANYLLRGYY 180

Query:   181 EGKRAAETELLTRYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLP 240
             EGKRAAETELLTR+ YGG+ILRPGFIYGTR+VG MK+PLGV GSPMEMVLQ AKPL+QLP
Sbjct:   181 EGKRAAETELLTRFAYGGIILRPGFIYGTRSVGSMKIPLGVFGSPMEMVLQQAKPLNQLP 240

Query:   241 LVGPLFTPPXXXXXXXXXXXXXXTDPVFPPGIVDVHGILRYSQ-KSR 286
             LVGPLFTPP              TDPVFPPGIVDVHGI RYSQ KSR
Sbjct:   241 LVGPLFTPPVNVESVAKVAVRAATDPVFPPGIVDVHGIQRYSQQKSR 287

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005739 "mitochondrion" evidence=ISM

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2146092 AT5G15910 [Arabidopsis thaliana (taxid:3702)]

 Score = 677 (243.4 bits), Expect = 1.3e-66, P = 1.3e-66
 Identities = 137/282 (48%), Positives = 190/282 (67%)

Query:     1 MRTIVSRLINSRSSVSRLSAITASGNGRYLSTDSNKVDEPLKVEEAETVNVPPPPSEKLL 60
             +R+++ +   + SSV  +S+I+  GN R LS          +V  + +         K+L
Sbjct:     2 LRSLIWKRSQAYSSVVTMSSISQRGNERLLS----------EVAGSHS------RDNKIL 45

Query:    61 VLGGNGFVGSHICREALDRGLTVAXXXXXXXXXXXXXWANNVIWHQGNLLSSDSWKEALD 120
             VLGGNG+VGSHIC+EAL +G +V+             W ++V WHQG+LLS DS K AL+
Sbjct:    46 VLGGNGYVGSHICKEALRQGFSVSSLSRSGRSSLHDSWVDDVTWHQGDLLSPDSLKPALE 105

Query:   121 GVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGVANYLLQGYY 180
             G+T+VISCVGGFGSNS M +INGTANINA++AA+E+GVKRFVYISAADFGV N L++GY+
Sbjct:   106 GITSVISCVGGFGSNSQMVRINGTANINAVKAAAEQGVKRFVYISAADFGVINNLIRGYF 165

Query:   181 EGKRAAETELLTRYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHA-KPLSQL 239
             EGKRA E E+L ++   G +LRPGFI+GTR VG +KLPL +IG+P+EMVL+   K ++++
Sbjct:   166 EGKRATEAEILDKFGNRGSVLRPGFIHGTRQVGSIKLPLSLIGAPLEMVLKLLPKEVTKI 225

Query:   240 PLVGPLFTPPXXXXXXXXXXXXXXTDPVFPPGIVDVHGILRY 281
             P++GPL  PP               DP F  G++DV+ IL++
Sbjct:   226 PVIGPLLIPPVNVKSVAATAVKAAVDPEFASGVIDVYRILQH 267

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005739 "mitochondrion" evidence=ISM;IDA

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0010264 "myo-inositol hexakisphosphate biosynthetic process" evidence=RCA

TAIR|locus:2031710 AT1G32220 [Arabidopsis thaliana (taxid:3702)]

 Score = 438 (159.2 bits), Expect = 2.8e-41, P = 2.8e-41
 Identities = 92/236 (38%), Positives = 131/236 (55%)

Query:    56 SEKLLVLGGNGFVGSHICREALDRGLTVAXXXXXXXXXXXXXWANNVIWHQGNLLSSDSW 115
             SE+++VLGGNGFVGS IC+ A+  G+ V              W + V W  G++   + W
Sbjct:    62 SERVVVLGGNGFVGSAICKAAISNGIEVVSVSRSGRPNFEDSWLDQVTWVTGDVFYLN-W 120

Query:   116 KEALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGVANYL 175
              E L G TAV+S +GGFG+   M +ING AN+ A+ AA + GV +FV I+  D+ +  ++
Sbjct:   121 DEVLLGATAVVSTIGGFGNEEQMKRINGEANVTAVNAAKDFGVPKFVLITVHDYNLPPFI 180

Query:   176 LQ-GYYEGKRAAETELLTRYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHA- 233
             L  GY+ GKR AE ELL++YP  GV+LRPGFIYG R V G+++PL ++G P++ +   A 
Sbjct:   181 LSNGYFTGKRNAEAELLSKYPTSGVVLRPGFIYGKRKVNGIEVPLDLVGEPLDKIYDSAE 240

Query:   234 ---KPLSQLPLVGPLFTPPXXXXXXXXXXXXXXTDPVFPPGIVDVHGILRYSQKSR 286
                +PL  LP    +  PP               D  F  GI  +  I   + K R
Sbjct:   241 RFIRPLRSLPASDLILAPPVNVDDLALAVINAVKDDDFF-GIFTIEQIKEAAAKMR 295

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005739 "mitochondrion" evidence=ISM

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0010287 "plastoglobule" evidence=IDA

GO:0009579 "thylakoid" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0006979 "response to oxidative stress" evidence=IMP

GO:0042631 "cellular response to water deprivation" evidence=RCA

SGD|S000004281 YLR290C "Putative protein of unknown function" [Saccharomyces cerevisiae (taxid:4932)]

 Score = 112 (44.5 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
 Identities = 25/78 (32%), Positives = 35/78 (44%)

Query:    58 KLLVLGGNGFVGSHICREALDRGLTVAXXXXXXXXXXXXX-----WANNVIWHQGNLLSS 112
             KL+V GGNGF+G  IC+EA+  G  V                   W   V W   ++   
Sbjct:     4 KLIVFGGNGFLGKRICQEAVTSGYQVVSVSRSGKAPHSNELNDKQWMQEVQWTAADIFKP 63

Query:   113 DSWKEALDGVTAVISCVG 130
             DS+ E L+  T V+  +G
Sbjct:    64 DSYHELLNNATNVVHSLG 81

GO:0008150 "biological_process" evidence=ND

GO:0005739 "mitochondrion" evidence=IEA;IDA

GO:0003674 "molecular_function" evidence=ND

GO:0000166 "nucleotide binding" evidence=IEA

ASPGD|ASPL0000045253 AN1860 [Emericella nidulans (taxid:162425)]

 Score = 116 (45.9 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
 Identities = 27/83 (32%), Positives = 42/83 (50%)

Query:    56 SEKLLVLGGNGFVGSHICREALDRGLTVAXXXXX--------XXXXXXXXWANNVIWHQG 107
             S+KL+V GGNGF+GS IC+ A+ RG +V                      WA +V W + 
Sbjct:     3 SKKLVVAGGNGFLGSRICKSAVARGWSVTSISRSGEPRWDVVTSSPQRPGWAKSVEWAKA 62

Query:   108 NLLSSDSWKEALDGVTAVISCVG 130
             ++L  +++K  L    AV+  +G
Sbjct:    63 DILKPNTYKPFLKDANAVVHSMG 85

GO:0008150 "biological_process" evidence=ND

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

UNIPROTKB|Q0C619 HNE_0090 "Putative NADH-quinone oxidoreductase" [Hyphomonas neptunium ATCC 15444 (taxid:228405)]

 Score = 144 (55.7 bits), Expect = 1.0e-07, P = 1.0e-07
 Identities = 50/159 (31%), Positives = 72/159 (45%)

Query:    56 SEKLLVL-GGNGFVGSHICREALDRGLTVAXXXXXXXXXXXXXWANNVIWH---QGNLLS 111
             S+ L+ L GG+GF+G +  R  +++G  V               A    W    Q N+  
Sbjct:     2 SKGLVTLVGGSGFIGRYAARALVEKGWRVRVACRRVHNAIDVRLAGPPGWVDVVQANIRD 61

Query:   112 SDSWKEALDGVTAVISCVGGFGSNSYMYKINGTANINAIRA--ASEKGVKRFVYISAADF 169
               S + A+DG  AV++ VG    ++         +  A+ A  A EKG+KRFV ISA   
Sbjct:    62 RASLERAVDGADAVVNLVGILFEHARQTFEGAQTDGAALLAEVAREKGIKRFVQISA--I 119

Query:   170 GVANYLLQGYYEGKRAAETELLTRYPYGGVILRPGFIYG 208
             G        Y   K AAE  +  R+P   VILRP  ++G
Sbjct:   120 GADPDSRSPYGRTKAAAEEAVRERFP-SAVILRPSIVFG 157

GO:0050136 "NADH dehydrogenase (quinone) activity" evidence=ISS

GO:0055114 "oxidation-reduction process" evidence=ISS

TIGR_CMR|SPO_3772 SPO_3772 "NADH ubiquinone oxidoreductase, putative" [Ruegeria pomeroyi DSS-3 (taxid:246200)]

 Score = 133 (51.9 bits), Expect = 2.0e-06, P = 2.0e-06
 Identities = 50/161 (31%), Positives = 70/161 (43%)

Query:    56 SEKLLVLGGNGFVGSHICREALDRG--LTVAXXXXXXXXXXXXXWA-NNVIWHQGNLLSS 112
             S+ + + GG+GFVG +I R     G  + VA              A   V     NL   
Sbjct:     2 SKLVTIYGGSGFVGRYIARRMAKEGWRVRVAVRRPNEAMHVKPYGAVGQVEPVLCNLRDD 61

Query:   113 DSWKEALDGVTAVISCVG---GFGSNSY-MYKINGTANINAIRAASEKGVKRFVYISAAD 168
             +S  + + G  AV++CVG     G NS+   +  G   I   R A+E+GV R V++SA  
Sbjct:    62 NSVAQTMRGADAVVNCVGVLNELGRNSFDAVQAEGAERI--ARIAAEQGVARMVHVSA-- 117

Query:   169 FGVANYLLQGYYEGKRAAETELLTRYPYGGVILRPGFIYGT 209
              G        Y   K   E  +L   P   +ILRP  I+GT
Sbjct:   118 IGADGDSDSAYSRSKALGEAGVLRHMP-DAMILRPSVIFGT 157

GO:0016655 "oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor" evidence=ISS

CGD|CAL0002191 orf19.7092 [Candida albicans (taxid:5476)]

 Score = 95 (38.5 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
 Identities = 23/94 (24%), Positives = 39/94 (41%)

Query:    57 EKLLVLGGNGFVGSHICREALDRGLTVAXXXXXXX---XXXXXXWANNVIWHQGNLLSSD 113
             + + V GGNGF+G  IC   + RG  V                 W   V W Q ++    
Sbjct:     3 KSIAVFGGNGFLGRKICEVGVRRGYDVTSFSRHGEPPEAVVHQPWVAKVNWEQADIFQPL 62

Query:   114 SWKEALDGVTAVISCVGG-FGSNSYMYKINGTAN 146
             ++++ L   + ++  +G  F + SY   +N   N
Sbjct:    63 TYQDKLKNYSTIVHSIGILFENQSYKKAMNSNFN 96

GO:0005739 "mitochondrion" evidence=IEA

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|Q5AFH6 CaO19.7092 "Putative uncharacterized protein" [Candida albicans SC5314 (taxid:237561)]

 Score = 95 (38.5 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
 Identities = 23/94 (24%), Positives = 39/94 (41%)

Query:    57 EKLLVLGGNGFVGSHICREALDRGLTVAXXXXXXX---XXXXXXWANNVIWHQGNLLSSD 113
             + + V GGNGF+G  IC   + RG  V                 W   V W Q ++    
Sbjct:     3 KSIAVFGGNGFLGRKICEVGVRRGYDVTSFSRHGEPPEAVVHQPWVAKVNWEQADIFQPL 62

Query:   114 SWKEALDGVTAVISCVGG-FGSNSYMYKINGTAN 146
             ++++ L   + ++  +G  F + SY   +N   N
Sbjct:    63 TYQDKLKNYSTIVHSIGILFENQSYKKAMNSNFN 96

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|Q2GE21 NSE_0386 "NADH-ubiquinone oxidoreductase family protein" [Neorickettsia sennetsu str. Miyayama (taxid:222891)]

 Score = 130 (50.8 bits), Expect = 5.0e-06, P = 5.0e-06
 Identities = 43/158 (27%), Positives = 74/158 (46%)

Query:    57 EKLLVLGGNGFVGSHICREALDRGLTVAXXXXXXXXXXXXXWANNV----IWHQGNLLSS 112
             +K+ V GG+GF+GS++ RE +  G  V               + N+    + H G++   
Sbjct:    31 KKVTVFGGSGFIGSYVVRELVKSGYRVTVVANSLSCAKKLKLSGNLGQISVVH-GDIRYP 89

Query:   113 DSWKEALDGVTAVISCVGGFG--SNSYMYKINGTANINAIRAASEKGVKRFVYISAADFG 170
             D   + +     VI+ VG     S++    IN  A     + A+E GV+RF++ SA   G
Sbjct:    90 DDIVKGIGNSEIVINMVGVLRETSSASFGAINHLACAQVAQIAAENGVRRFIHFSAL-LG 148

Query:   171 VANYLLQGYYEGKRAAETELLTRYPYGGVILRPGFIYG 208
               N   + Y + K   E  + + +P   +I+RPG ++G
Sbjct:   149 -CNGATK-YGKSKLNGEEAVRSAFPES-IIIRPGVVFG 183

GO:0003824 "catalytic activity" evidence=ISS

GO:0008152 "metabolic process" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	286
cd05243	203	cd05243, SDR_a5, atypical (a) SDRs, subgroup 5	2e-25
COG0702	275	COG0702, COG0702, Predicted nucleoside-diphosphate	1e-18
cd05228	318	cd05228, AR_FR_like_1_SDR_e, uncharacterized subgr	2e-18
cd05271	273	cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ub	2e-18
pfam13460	182	pfam13460, NAD_binding_10, NADH(P)-binding	7e-18
COG0451	314	COG0451, WcaG, Nucleoside-diphosphate-sugar epimer	4e-17
pfam01370	233	pfam01370, Epimerase, NAD dependent epimerase/dehy	3e-16
cd05244	207	cd05244, BVR-B_like_SDR_a, biliverdin IX beta redu	9e-16
cd05226	176	cd05226, SDR_e_a, Extended (e) and atypical (a) SD	7e-14
cd05259	282	cd05259, PCBER_SDR_a, phenylcoumaran benzylic ethe	1e-13
cd05250	214	cd05250, CC3_like_SDR_a, CC3(TIP30)-like, atypical	2e-13
pfam01073	280	pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydr	2e-13
cd05245	293	cd05245, SDR_a2, atypical (a) SDRs, subgroup 2	4e-13
cd08946	200	cd08946, SDR_e, extended (e) SDRs	6e-13
cd05264	300	cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase	1e-12
TIGR03466	328	TIGR03466, HpnA, hopanoid-associated sugar epimera	4e-12
cd05232	303	cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase,	4e-12
cd05241	331	cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid d	4e-12
cd05227	301	cd05227, AR_SDR_e, aldehyde reductase, extended (e	6e-12
cd05263	293	cd05263, MupV_like_SDR_e, Pseudomonas fluorescens	5e-11
cd05269	272	cd05269, TMR_SDR_a, triphenylmethane reductase (TM	3e-10
cd05265	250	cd05265, SDR_a1, atypical (a) SDRs, subgroup 1	6e-10
cd05256	304	cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-e	2e-09
CHL00194	317	CHL00194, ycf39, Ycf39; Provisional	2e-09
cd09813	335	cd09813, 3b-HSD-NSDHL-like_SDR_e, human NSDHL (NAD	4e-09
pfam07993	245	pfam07993, NAD_binding_4, Male sterility protein	1e-08
pfam05368	232	pfam05368, NmrA, NmrA-like family	1e-08
PLN02657	390	PLN02657, PLN02657, 3,8-divinyl protochlorophyllid	1e-08
COG1087	329	COG1087, GalE, UDP-glucose 4-epimerase [Cell envel	3e-08
cd05273	328	cd05273, GME-like_SDR_e, Arabidopsis thaliana GDP-	5e-08
COG2910	211	COG2910, COG2910, Putative NADH-flavin reductase [	6e-08
cd05247	323	cd05247, UDP_G4E_1_SDR_e, UDP-glucose 4 epimerase,	8e-08
cd05193	295	cd05193, AR_like_SDR_e, aldehyde reductase, flavon	3e-07
cd05251	242	cd05251, NmrA_like_SDR_a, NmrA (a transcriptional	4e-07
cd05257	316	cd05257, Arna_like_SDR_e, Arna decarboxylase_like,	6e-07
cd05262	291	cd05262, SDR_a7, atypical (a) SDRs, subgroup 7	1e-06
cd09811	354	cd09811, 3b-HSD_HSDB1_like_SDR_e, human 3beta-HSD	2e-06
TIGR01179	328	TIGR01179, galE, UDP-glucose-4-epimerase GalE	3e-06
cd05235	290	cd05235, SDR_e1, extended (e) SDRs, subgroup 1	4e-06
cd05254	280	cd05254, dTDP_HR_like_SDR_e, dTDP-6-deoxy-L-lyxo-4	2e-05
cd05229	302	cd05229, SDR_a3, atypical (a) SDRs, subgroup 3	3e-05
cd08958	293	cd08958, FR_SDR_e, flavonoid reductase (FR), exten	3e-05
PLN02695	370	PLN02695, PLN02695, GDP-D-mannose-3',5'-epimerase	7e-05
cd05242	296	cd05242, SDR_a8, atypical (a) SDRs, subgroup 8	2e-04
COG1091	281	COG1091, RfbD, dTDP-4-dehydrorhamnose reductase [C	2e-04
cd05267	203	cd05267, SDR_a6, atypical (a) SDRs, subgroup 6	2e-04
COG3320	382	COG3320, COG3320, Putative dehydrogenase domain of	4e-04
PRK09009	235	PRK09009, PRK09009, C factor cell-cell signaling p	4e-04
TIGR03649	285	TIGR03649, ergot_EASG, ergot alkaloid biosynthesis	6e-04
cd05231	259	cd05231, NmrA_TMR_like_1_SDR_a, NmrA (a transcript	0.001
cd05246	315	cd05246, dTDP_GD_SDR_e, dTDP-D-glucose 4,6-dehydra	0.003
TIGR04180	297	TIGR04180, EDH_00030, NAD dependent epimerase/dehy	0.003
cd05239	300	cd05239, GDP_FS_SDR_e, GDP-fucose synthetase, exte	0.003
cd05234	305	cd05234, UDP_G4E_2_SDR_e, UDP-glucose 4 epimerase,	0.004
TIGR01777	291	TIGR01777, yfcH, TIGR01777 family protein	0.004

>gnl|CDD|187554 cd05243, SDR_a5, atypical (a) SDRs, subgroup 5

 Score =  100 bits (250), Expect = 2e-25
 Identities = 67/217 (30%), Positives = 89/217 (41%), Gaps = 35/217 (16%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKE 117
           K+LV+G  G VG H+ RE LDRG  V +L R   S      A       G+L  ++S   
Sbjct: 1   KVLVVGATGKVGRHVVRELLDRGYQVRALVRD-PSQAEKLEAAGAEVVVGDLTDAESLAA 59

Query: 118 ALDGVTAVISCVGGFGSNSYMY-KINGTANINAIRAASEKGVKRFVYISAADFGVANY-- 174
           AL+G+ AVIS  G  G        ++   NIN I AA + GVKRFV +S+   G      
Sbjct: 60  ALEGIDAVISAAGSGGKGGPRTEAVDYDGNINLIDAAKKAGVKRFVLVSS--IGADKPSH 117

Query: 175 ---LLQGYYEGKRAAETELLTR-YPYGGVILRPG-FIYGTRTVGGMKLPLGVIGSPMEMV 229
               L  Y + KR AE  L      Y   I+RPG         G  ++ LG  G+     
Sbjct: 118 PLEALGPYLDAKRKAEDYLRASGLDY--TIVRPGGLTDDPAGTG--RVVLGGDGTR---- 169

Query: 230 LQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDP 266
                              P++   VA+V   A   P
Sbjct: 170 ----------------LDGPISRADVAEVLAEALDTP 190

This subgroup contains atypical SDRs, some of which are identified as putative NAD(P)-dependent epimerases, one as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is very similar to the extended SDRs, GXXGXXG, and binds NADP. Generally, this subgroup has poor conservation of the active site tetrad; however, individual sequences do contain matches to the YXXXK active site motif, the upstream Ser, and there is a highly conserved Asp in place of the usual active site Asn throughout the subgroup. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 203

>gnl|CDD|223774 COG0702, COG0702, Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 83.0 bits (205), Expect = 1e-18
 Identities = 53/229 (23%), Positives = 74/229 (32%), Gaps = 20/229 (8%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKE 117
           K+LV G  GFVG  + RE L RG  V +  R+  ++   + A  V    G+L    S   
Sbjct: 2   KILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAA--AALAGGVEVVLGDLRDPKSLVA 59

Query: 118 ALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGVANYLLQ 177
              GV  V+   G    +     +  TA + A  AA   GVK  V +S    G       
Sbjct: 60  GAKGVDGVLLISGLLDGSDAFRAVQVTAVVRAAEAAGA-GVKHGVSLSVL--GADAASPS 116

Query: 178 GYYEGKRAAETELLTRYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLS 237
                K A E   L         LR    Y           LG   + +E       P+ 
Sbjct: 117 ALARAKAAVE-AALRSSGIPYTTLRRAAFY-----------LGAGAAFIEAAEAAGLPVI 164

Query: 238 QLPLVGPLFTPPVNVTVVAKVAVRAATDPVFPPGIVDVHGILRYSQKSR 286
                      P+ V  VA+    A   P       ++ G    +    
Sbjct: 165 PRG---IGRLSPIAVDDVAEALAAALDAPATAGRTYELAGPEALTLAEL 210

Length = 275

>gnl|CDD|187539 cd05228, AR_FR_like_1_SDR_e, uncharacterized subgroup of aldehyde reductase and flavonoid reductase related proteins, extended (e) SDRs

 Score = 83.5 bits (207), Expect = 2e-18
 Identities = 48/169 (28%), Positives = 67/169 (39%), Gaps = 21/169 (12%)

Query: 60  LVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEAL 119
           LV G  GF+GS++ R  L +G  V +L RSG S         V   +G+L  + S   A+
Sbjct: 2   LVTGATGFLGSNLVRALLAQGYRVRALVRSG-SDAVLLDGLPVEVVEGDLTDAASLAAAM 60

Query: 120 DGVTAVISCVGGF----GSNSYMYKINGTANINAIRAASEKGVKRFVYISA-ADFGVA-- 172
            G   V                +Y+ N     N + AA E GV+R V+ S+ A  G    
Sbjct: 61  KGCDRVFHLAAFTSLWAKDRKELYRTNVEGTRNVLDAALEAGVRRVVHTSSIAALGGPPD 120

Query: 173 -----NYLLQG------YYEGKRAAETELLTRYPYG--GVILRPGFIYG 208
                            YY  K  AE E+L     G   VI+ P  ++G
Sbjct: 121 GRIDETTPWNERPFPNDYYRSKLLAELEVLEAAAEGLDVVIVNPSAVFG 169

This subgroup contains proteins of unknown function related to aldehyde reductase and flavonoid reductase of the extended SDR-type. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 318

>gnl|CDD|187579 cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, subunit 9, 39 kDa, (NDUFA9) -like, atypical (a) SDRs

 Score = 82.3 bits (204), Expect = 2e-18
 Identities = 58/242 (23%), Positives = 94/242 (38%), Gaps = 38/242 (15%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANN---VIWHQGNLLSSDS 114
            + V G  GF+G ++      RG  V    R    + R     +   V++ + +L   +S
Sbjct: 2   VVTVFGATGFIGRYVVNRLAKRGSQVIVPYRCEAYARRLLVMGDLGQVLFVEFDLRDDES 61

Query: 115 WKEALDGVTAVISCVG---GFGSNSYMY-KINGTANINAIRAASEKGVKRFVYISA--AD 168
            ++AL+G   VI+ VG      + S+    + G   +   +AA E GV+R ++ISA  AD
Sbjct: 62  IRKALEGSDVVINLVGRLYETKNFSFEDVHVEGPERL--AKAAKEAGVERLIHISALGAD 119

Query: 169 F-GVANYLLQGYYEGKRAAETELLTRYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPME 227
               + YL       K   E  +   +P    I+RP  ++G       +           
Sbjct: 120 ANSPSKYLRS-----KAEGEEAVREAFP-EATIVRPSVVFGREDRFLNRF---------- 163

Query: 228 MVLQHAKPLSQLPLVGPLFTP-----PVNVTVVAKVAVRAATDPVFPPGIVDVHGILRYS 282
                AK L+ LP    +        PV V  VA+   RA  DP       ++ G   Y+
Sbjct: 164 -----AKLLAFLPFPPLIGGGQTKFQPVYVGDVAEAIARALKDPETEGKTYELVGPKVYT 218

Query: 283 QK 284
             
Sbjct: 219 LA 220

This subgroup of extended SDR-like proteins are atypical SDRs. They have a glycine-rich NAD(P)-binding motif similar to the typical SDRs, GXXGXXG, and have the YXXXK active site motif (though not the other residues of the SDR tetrad). Members identified include NDUFA9 (mitochondrial) and putative nucleoside-diphosphate-sugar epimerase. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 273

>gnl|CDD|222146 pfam13460, NAD_binding_10, NADH(P)-binding

 Score = 78.9 bits (195), Expect = 7e-18
 Identities = 48/171 (28%), Positives = 65/171 (38%), Gaps = 21/171 (12%)

Query: 59  LLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEA 118
           + V+G  G  G  + +E L RG  V +LSR+  S         V   Q +L       EA
Sbjct: 1   IAVIGATGKTGRRLVKELLARGHQVTALSRNP-SKAPAPGVTPV---QKDLFDLADLAEA 56

Query: 119 LDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAA---------DF 169
           L GV AV+   G    +S           + + AA+  GV+R V +SAA           
Sbjct: 57  LAGVDAVVDAFGARPDDS-------DGVKHLLDAAARAGVRRIVVVSAAGLYRDEPGTFR 109

Query: 170 GVANYLLQGYYEGKRAAETELLTRYPYGGVILRPGFIYGTRTVGGMKLPLG 220
                L   Y   K AAE ELL        I+RPG ++            G
Sbjct: 110 LDDAPLFPPYARAKAAAE-ELLRASGLDWTIVRPGALFDEEGETYEIGTEG 159

Length = 182

>gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 79.2 bits (195), Expect = 4e-17
 Identities = 50/177 (28%), Positives = 67/177 (37%), Gaps = 26/177 (14%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKE 117
           ++LV GG GF+GSH+    L  G  V  L R           + V +   +L   D   E
Sbjct: 2   RILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPL--LSGVEFVVLDLTDRDLVDE 59

Query: 118 ALDGVTAVI----SCVGGFGSN----SYMYKINGTANINAIRAASEKGVKRFVYIS--AA 167
              GV   +    +      SN    +    +N    +N + AA   GVKRFV+ S  + 
Sbjct: 60  LAKGVPDAVIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAGVKRFVFASSVSV 119

Query: 168 DFGVANYL-----------LQGYYEGKRAAETELLTRYPYGG---VILRPGFIYGTR 210
            +G    L           L  Y   K AAE  L       G   VILRP  +YG  
Sbjct: 120 VYGDPPPLPIDEDLGPPRPLNPYGVSKLAAEQLLRAYARLYGLPVVILRPFNVYGPG 176

Length = 314

>gnl|CDD|216461 pfam01370, Epimerase, NAD dependent epimerase/dehydratase family

 Score = 75.8 bits (187), Expect = 3e-16
 Identities = 52/172 (30%), Positives = 71/172 (41%), Gaps = 26/172 (15%)

Query: 60  LVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEAL 119
           LV GG GF+GSH+ R  L  G  V  L R  RS   ++      +H+G+L   D+ +  L
Sbjct: 2   LVTGGTGFIGSHLVRRLLQEGYEVIVLGRRRRSESLNTGRIR--FHEGDLTDPDALERLL 59

Query: 120 DGV--TAVISCVGG------FGSNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGV 171
             V   AVI           F   +   + N    +  + AA   GVKRFV+ S+++   
Sbjct: 60  AEVQPDAVIHLAAQSGVGASFEDPADFIRANVLGTLRLLEAARRAGVKRFVFASSSEVYG 119

Query: 172 ANYLLQG-----------YYEGKRAAETELLTRY--PYG--GVILRPGFIYG 208
                             Y   K AAE  L+  Y   YG   VILR   +YG
Sbjct: 120 DVADPPITEDTPLGPLSPYAAAKLAAE-RLVEAYARAYGLRAVILRLFNVYG 170

This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions. Length = 233

>gnl|CDD|187555 cd05244, BVR-B_like_SDR_a, biliverdin IX beta reductase (BVR-B, aka flavin reductase)-like proteins; atypical (a) SDRs

 Score = 73.8 bits (182), Expect = 9e-16
 Identities = 40/112 (35%), Positives = 56/112 (50%), Gaps = 7/112 (6%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKE 117
           K+ ++G  G  GS I REAL RG  V +L R       +     V+  QG++L  +  KE
Sbjct: 1   KIAIIGATGRTGSAIVREALARGHEVTALVRDPAKLPAEHEKLKVV--QGDVLDLEDVKE 58

Query: 118 ALDGVTAVISCVGGFGSNS--YMYKINGTANINAIRAASEKGVKRFVYISAA 167
           AL+G  AVIS +G     S   ++   GT NI  + A    GVKR + +  A
Sbjct: 59  ALEGQDAVISALGTRNDLSPTTLH-SEGTRNI--VSAMKAAGVKRLIVVGGA 107

Human BVR-B catalyzes pyridine nucleotide-dependent production of bilirubin-IX beta during fetal development; in the adult BVR-B has flavin and ferric reductase activities. Human BVR-B catalyzes the reduction of FMN, FAD, and riboflavin. Recognition of flavin occurs mostly by hydrophobic interactions, accounting for the broad substrate specificity. Atypical SDRs are distinct from classical SDRs. BVR-B does not share the key catalytic triad, or conserved tyrosine typical of SDRs. The glycine-rich NADP-binding motif of BVR-B is GXXGXXG, which is similar but not identical to the pattern seen in extended SDRs. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 207

>gnl|CDD|187537 cd05226, SDR_e_a, Extended (e) and atypical (a) SDRs

 Score = 67.8 bits (166), Expect = 7e-14
 Identities = 45/159 (28%), Positives = 67/159 (42%), Gaps = 14/159 (8%)

Query: 60  LVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEAL 119
           L+LG  GF+G  + RE L++G  V  L R+ +   ++      +  +G+L   DS  +A+
Sbjct: 2   LILGATGFIGRALARELLEQGHEVTLLVRNTKRLSKEDQEPVAV-VEGDLRDLDSLSDAV 60

Query: 120 DGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAA-----DFGVANY 174
            GV  VI   G         +++     N + AA E GVK F++IS+             
Sbjct: 61  QGVDVVIHLAGAPRDTRDFCEVDVEGTRNVLEAAKEAGVKHFIFISSLGAYGDLHEETEP 120

Query: 175 LLQGYY-EGKRAAE---TELLTRYPYGGVILRPGFIYGT 209
                Y   K   E    E    Y     I+RPG IYG 
Sbjct: 121 SPSSPYLAVKAKTEAVLREASLPY----TIVRPGVIYGD 155

Extended or atypical short-chain dehydrogenases/reductases (SDRs, aka tyrosine-dependent oxidoreductases) are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 176

>gnl|CDD|187569 cd05259, PCBER_SDR_a, phenylcoumaran benzylic ether reductase (PCBER) like, atypical (a) SDRs

 Score = 68.9 bits (169), Expect = 1e-13
 Identities = 39/134 (29%), Positives = 55/134 (41%), Gaps = 18/134 (13%)

Query: 58  KLLVLGGNGFVGSHICREALDR-GLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWK 116
           K+ + G  G +G  I    L   G TV  L+R   +S  +   + V     +  S +S  
Sbjct: 1   KIAIAGATGTLGGPIVSALLASPGFTVTVLTRPSSTSSNEFQPSGVKVVPVDYASHESLV 60

Query: 117 EALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGV----- 171
            AL GV AVIS +GG               +  I AA   GVKRF+    ++FGV     
Sbjct: 61  AALKGVDAVISALGGAAIGD---------QLKLIDAAIAAGVKRFI---PSEFGVDYDRI 108

Query: 172 ANYLLQGYYEGKRA 185
               L   ++ KR 
Sbjct: 109 GALPLLDLFDEKRD 122

PCBER and pinoresinol-lariciresinol reductases are NADPH-dependent aromatic alcohol reductases, and are atypical members of the SDR family. Other proteins in this subgroup are identified as eugenol synthase. These proteins contain an N-terminus characteristic of NAD(P)-binding proteins and a small C-terminal domain presumed to be involved in substrate binding, but they do not have the conserved active site Tyr residue typically found in SDRs. Numerous other members have unknown functions. The glycine rich NADP-binding motif in this subgroup is of 2 forms: GXGXXG and G[GA]XGXXG; it tends to be atypical compared with the forms generally seen in classical or extended SDRs. The usual SDR active site tetrad is not present, but a critical active site Lys at the usual SDR position has been identified in various members, though other charged and polar residues are found at this position in this subgroup. Atypical SDR-related proteins retain the Rossmann fold of the SDRs, but have limited sequence identity and generally lack the catalytic properties of the archetypical members. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 282

>gnl|CDD|187560 cd05250, CC3_like_SDR_a, CC3(TIP30)-like, atypical (a) SDRs

 Score = 67.3 bits (165), Expect = 2e-13
 Identities = 52/223 (23%), Positives = 78/223 (34%), Gaps = 23/223 (10%)

Query: 60  LVLGGNGFVGSHICREALDRGL--TVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKE 117
           LVLG  G VG H+ RE L       V ++ R  R          ++    +    D + E
Sbjct: 4   LVLGATGLVGKHLLRELLKSPYYSKVTAIVR--RKLTFPEAKEKLVQIVVDFERLDEYLE 61

Query: 118 ALDGVTAVISCVG----GFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGVAN 173
           A         C+G      GS     K++    +   + A   GV+ F+ +S+      +
Sbjct: 62  AFQNPDVGFCCLGTTRKKAGSQENFRKVDHDYVLKLAKLAKAAGVQHFLLVSSLGADPKS 121

Query: 174 YLLQGYYEGKRAAETELLTRYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHA 233
             L  Y + K   E +L         I RPG + G R              P E + Q  
Sbjct: 122 SFL--YLKVKGEVERDLQKLGFERLTIFRPGLLLGERQE----------SRPGERLAQ-- 167

Query: 234 KPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDPVFPPGIVDVH 276
           K L  L  +G     P+    VAK  V+AA        +  + 
Sbjct: 168 KLLRILSPLGFPKYKPIPAETVAKAMVKAALKES-SNKVEILE 209

Atypical SDRs in this subgroup include CC3 (also known as TIP30) which is implicated in tumor suppression. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine rich NAD(P)-binding motif that resembles the extended SDRs, and have an active site triad of the SDRs (YXXXK and upstream Ser), although the upstream Asn of the usual SDR active site is substituted with Asp. For CC3, the Tyr of the triad is displaced compared to the usual SDRs and the protein is monomeric, both these observations suggest that the usual SDR catalytic activity is not present. NADP appears to serve an important role as a ligand, and may be important in the interaction with other macromolecules. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 214

>gnl|CDD|216283 pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydrogenase/isomerase family

 Score = 68.5 bits (168), Expect = 2e-13
 Identities = 48/183 (26%), Positives = 68/183 (37%), Gaps = 34/183 (18%)

Query: 60  LVLGGNGFVGSHICREALDRGL--TVASLSRSGRSSLRDSWAN-NVI-WHQGNLLSSDSW 115
           LV GG GF+G HI R  L  G    V          L + ++   VI + +G++      
Sbjct: 1   LVTGGGGFLGRHIVRLLLREGELQEVRVFDLRFSPELLEDFSKLQVITYIEGDVTDKQDL 60

Query: 116 KEALDGV-----TAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAADFG 170
           + AL G      TA I  V G      + K+N     N + A  + GV+  VY S+ +  
Sbjct: 61  RRALQGSDVVIHTAAIIDVFGKAYRDTIMKVNVKGTQNVLDACVKAGVRVLVYTSSMEVV 120

Query: 171 VANYLLQGYYEG-----------------KRAAETELL----TRYPYGGVI----LRPGF 205
             N   Q    G                 K  AE  +L    +    GG +    LRP  
Sbjct: 121 GPNSYGQPIVNGDETTPYESTHQDPYPESKALAEKLVLKANGSTLKNGGRLYTCALRPAG 180

Query: 206 IYG 208
           I+G
Sbjct: 181 IFG 183

The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyzes the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. Length = 280

>gnl|CDD|187556 cd05245, SDR_a2, atypical (a) SDRs, subgroup 2

 Score = 67.8 bits (166), Expect = 4e-13
 Identities = 33/106 (31%), Positives = 47/106 (44%)

Query: 60  LVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEAL 119
           LV G  G+VG  +    L  G  V +L RS        W+  V   +G+L   +S + AL
Sbjct: 2   LVTGATGYVGGRLVPRLLQEGHQVRALVRSPEKLADRPWSERVTVVRGDLEDPESLRAAL 61

Query: 120 DGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYIS 165
           +G+      V   GS     + +  A  N  RAA   GVKR +Y+ 
Sbjct: 62  EGIDTAYYLVHSMGSGGDFEEADRRAARNFARAARAAGVKRIIYLG 107

This subgroup contains atypical SDRs, one member is identified as Escherichia coli protein ybjT, function unknown. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif consensus that generally matches the extended SDRs, TGXXGXXG, but lacks the characteristic active site residues of the SDRs. This subgroup has basic residues (HXXXR) in place of the active site motif YXXXK, these may have a catalytic role. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|212494 cd08946, SDR_e, extended (e) SDRs

 Score = 65.8 bits (161), Expect = 6e-13
 Identities = 48/166 (28%), Positives = 66/166 (39%), Gaps = 43/166 (25%)

Query: 60  LVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLS-SDSWKEA 118
           LV GG GF+GSH+ R  L+RG  V  + R            +V+ H   L+    SW   
Sbjct: 2   LVTGGAGFIGSHLVRRLLERGHEVVVIDRL-----------DVVVHLAALVGVPASWDNP 50

Query: 119 LDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYIS-AADFGVANYLLQ 177
            +                  ++ N    +N + AA + GVKRFVY S A+ +G    L +
Sbjct: 51  DE-----------------DFETNVVGTLNLLEAARKAGVKRFVYASSASVYGSPEGLPE 93

Query: 178 G----------YYEGKRAAETELLTRYPYGG---VILRPGFIYGTR 210
                      Y   K AAE  L +     G   VILR   +YG  
Sbjct: 94  EEETPPRPLSPYGVSKLAAEHLLRSYGESYGLPVVILRLANVYGPG 139

Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 200

>gnl|CDD|187574 cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase (G4E), subgroup 5, extended (e) SDRs

 Score = 66.2 bits (162), Expect = 1e-12
 Identities = 42/174 (24%), Positives = 69/174 (39%), Gaps = 23/174 (13%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKE 117
           ++L++GGNGF+GSH+    L+ G  V    RS            V + +G+  +    + 
Sbjct: 1   RVLIVGGNGFIGSHLVDALLEEGPQVRVFDRSIPPYELPLGG--VDYIKGDYENRADLES 58

Query: 118 ALDGVTAVI-----SCVGGFGSN-SYMYKINGTANINAIRAASEKGVKRFVYISA--ADF 169
           AL G+  VI     +       N     + N    +  + A +  G+ + ++ S+    +
Sbjct: 59  ALVGIDTVIHLASTTNPATSNKNPILDIQTNVAPTVQLLEACAAAGIGKIIFASSGGTVY 118

Query: 170 GVANYL----------LQGYYEGKRAAETEL-LTRYPYGG--VILRPGFIYGTR 210
           GV   L          +  Y   K A E  L L +Y YG    +LR    YG  
Sbjct: 119 GVPEQLPISESDPTLPISSYGISKLAIEKYLRLYQYLYGLDYTVLRISNPYGPG 172

This subgroup partially conserves the characteristic active site tetrad and NAD-binding motif of the extended SDRs, and has been identified as possible UDP-glucose 4-epimerase (aka UDP-galactose 4-epimerase), a homodimeric member of the extended SDR family. UDP-glucose 4-epimerase catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 300

>gnl|CDD|163279 TIGR03466, HpnA, hopanoid-associated sugar epimerase

 Score = 65.4 bits (160), Expect = 4e-12
 Identities = 47/137 (34%), Positives = 65/137 (47%), Gaps = 15/137 (10%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKE 117
           K+LV G  GFVGS + R  L++G  V  L R   S  R+    +V   +G+L    S ++
Sbjct: 2   KVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPT-SDRRNLEGLDVEIVEGDLRDPASLRK 60

Query: 118 ALDGVTAVISCVGGF----GSNSYMYKIN--GTANINAIRAASEKGVKRFVYISAADFGV 171
           A+ G  A+      +         MY  N  GT N+  +RAA E GV+R VY S+    V
Sbjct: 61  AVAGCRALFHVAADYRLWAPDPEEMYAANVEGTRNL--LRAALEAGVERVVYTSS----V 114

Query: 172 ANYLLQGYYEGKRAAET 188
           A   L    +G  A ET
Sbjct: 115 A--TLGVRGDGTPADET 129

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. This gene and its association with hopene biosynthesis in Zymomonas mobilis has been noted in the literature where the gene symbol hpnA was assigned. Hopanoids are known to be components of the plasma membrane and to have polar sugar head groups in Z. mobilis and other species. Length = 328

>gnl|CDD|187543 cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase, subgroup 4, extended (e) SDRs

 Score = 65.1 bits (159), Expect = 4e-12
 Identities = 55/233 (23%), Positives = 80/233 (34%), Gaps = 55/233 (23%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKE 117
           K+LV G NGF+G  +  + L RG  V    R+  ++        +          DS+ +
Sbjct: 1   KVLVTGANGFIGRALVDKLLSRGEEVRIAVRNAENAEPSVVLAELP-------DIDSFTD 53

Query: 118 ALDGVTAVISCVGGFGSNS---------YMYKINGTANINAIRAASEKGVKRFVYISA-- 166
              GV AV+         +         Y  K+N        RAA+ +GVKRFV++S+  
Sbjct: 54  LFLGVDAVVHLAARVHVMNDQGADPLSDYR-KVNTELTRRLARAAARQGVKRFVFLSSVK 112

Query: 167 --ADFGVA-------NYLLQGYY-EGKRAAE---TELLTRYPYGGVILRPGFIYGTRTVG 213
              +  V            Q  Y   K  AE    EL        VILRP  +YG    G
Sbjct: 113 VNGEGTVGAPFDETDPPAPQDAYGRSKLEAERALLELGASDGMEVVILRPPMVYGPGVRG 172

Query: 214 GMK-----------LPLGVIGSPMEMV------------LQHAKPLSQLPLVG 243
                         LP G + +   +V            +   K  +   LV 
Sbjct: 173 NFARLMRLIDRGLPLPPGAVKNRRSLVSLDNLVDAIYLCISLPKAANGTFLVS 225

UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of bacterial proteins, and includes the Staphylococcus aureus capsular polysaccharide Cap5N, which may have a role in the synthesis of UDP-N-acetyl-d-fucosamine. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 303

>gnl|CDD|187552 cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid dehydrogenases (3b-HSD)-like, extended (e) SDRs

 Score = 65.1 bits (159), Expect = 4e-12
 Identities = 46/173 (26%), Positives = 71/173 (41%), Gaps = 22/173 (12%)

Query: 60  LVLGGNGFVGSHICREALDRGLT-VASLSRS-GRSSLRDSWANNVIWHQGNLLSSDSWKE 117
           LV GG+GF G  + ++ L+RG T V S   +    +L      N+ + +G++   +  ++
Sbjct: 3   LVTGGSGFFGERLVKQLLERGGTYVRSFDIAPPGEALSAWQHPNIEFLKGDITDRNDVEQ 62

Query: 118 ALDGVTAVISC---VGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAAD--FGVA 172
           AL G   V      V   G     +++N     N + A    GV++FVY S++   FG  
Sbjct: 63  ALSGADCVFHTAAIVPLAGPRDLYWEVNVGGTQNVLDACQRCGVQKFVYTSSSSVIFGGQ 122

Query: 173 N---------YL---LQGYYEGKRAAETELLTRYPYGG---VILRPGFIYGTR 210
           N         Y       Y E K  AE  +L            LRP  I+G  
Sbjct: 123 NIHNGDETLPYPPLDSDMYAETKAIAEIIVLEANGRDDLLTCALRPAGIFGPG 175

Extended SDR family domains belonging to this subgroup have the characteristic active site tetrad and a fairly well-conserved NAD(P)-binding motif. 3b-HSD catalyzes the NAD-dependent conversion of various steroids, such as pregnenolone to progesterone, or androstenediol to testosterone. This subgroup includes an unusual bifunctional 3b-HSD/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. It also includes human 3 beta-HSD/HSD3B1 and C(27) 3beta-HSD/ [3beta-hydroxy-delta(5)-C(27)-steroid oxidoreductase; HSD3B7]. C(27) 3beta-HSD/HSD3B7 is a membrane-bound enzyme of the endoplasmic reticulum, that catalyzes the isomerization and oxidation of 7alpha-hydroxylated sterol intermediates, an early step in bile acid biosynthesis. Mutations in the human NSDHL (NAD(P)H steroid dehydrogenase-like protein) cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. Mutations in the human gene encoding C(27) 3beta-HSD underlie a rare autosomal recessive form of neonatal cholestasis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 331

>gnl|CDD|187538 cd05227, AR_SDR_e, aldehyde reductase, extended (e) SDRs

 Score = 64.2 bits (157), Expect = 6e-12
 Identities = 41/128 (32%), Positives = 59/128 (46%), Gaps = 22/128 (17%)

Query: 58  KLLVLGGNGFVGSHICREALDRG----LTVASLSRSG--RSSLRDSWANN----VIWHQG 107
            +LV G  GF+ SHI  + L  G     TV SLS+S   ++ L+ +  N+    VI    
Sbjct: 1   LVLVTGATGFIASHIVEQLLKAGYKVRGTVRSLSKSAKLKALLKAAGYNDRLEFVI--VD 58

Query: 108 NLLSSDSWKEALDGVTAVISCVGGFGSNSYMYK-------INGTANI-NAIRAASEKGVK 159
           +L + ++W EAL GV  VI     F       +       + GT N+  A +AA    VK
Sbjct: 59  DLTAPNAWDEALKGVDYVIHVASPFPFTGPDAEDDVIDPAVEGTLNVLEAAKAA--GSVK 116

Query: 160 RFVYISAA 167
           R V  S+ 
Sbjct: 117 RVVLTSSV 124

This subgroup contains aldehyde reductase of the extended SDR-type and related proteins. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 301

>gnl|CDD|187573 cd05263, MupV_like_SDR_e, Pseudomonas fluorescens MupV-like, extended (e) SDRs

 Score = 61.6 bits (150), Expect = 5e-11
 Identities = 41/182 (22%), Positives = 66/182 (36%), Gaps = 34/182 (18%)

Query: 59  LLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-------DSWANNVIWHQGNL-- 109
           + V GG GF+G H+ +  L+ G  V  L RS                A+ V   +G+L  
Sbjct: 1   VFVTGGTGFLGRHLVKRLLENGFKVLVLVRSESLGEAHERIEEAGLEADRVRVLEGDLTQ 60

Query: 110 ----LSSDSWKEALDGVTAVISCVGGF---GSNSYMYKINGTANINAIRAASEKGVKRFV 162
               LS+ + +E    V  VI C   +     N   ++ N     + +  A+   ++RF 
Sbjct: 61  PNLGLSAAASRELAGKVDHVIHCAASYDFQAPNEDAWRTNIDGTEHVLELAARLDIQRFH 120

Query: 163 YISAA-------------DFGVANYLLQGYYEGKRAAET---ELLTRYPYGGVILRPGFI 206
           Y+S A             +          Y + K  AE       T+ P    + RP  +
Sbjct: 121 YVSTAYVAGNREGNIRETELNPGQNFKNPYEQSKAEAEQLVRAAATQIPL--TVYRPSIV 178

Query: 207 YG 208
            G
Sbjct: 179 VG 180

This subgroup of extended SDR family domains have the characteristic active site tetrad and a well-conserved NAD(P)-binding motif. This subgroup is not well characterized, its members are annotated as having a variety of putative functions. One characterized member is Pseudomonas fluorescens MupV a protein involved in the biosynthesis of Mupirocin, a polyketide-derived antibiotic. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|187578 cd05269, TMR_SDR_a, triphenylmethane reductase (TMR)-like proteins, NMRa-like, atypical (a) SDRs

 Score = 59.2 bits (144), Expect = 3e-10
 Identities = 41/148 (27%), Positives = 66/148 (44%), Gaps = 14/148 (9%)

Query: 60  LVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEAL 119
           LV G  G +G+ +    L +  +V +L R+   +     A+ V   QG+    ++ + A 
Sbjct: 2   LVTGATGKLGTAVVELLLAKVASVVALVRNPEKAK-AFAADGVEVRQGDYDDPETLERAF 60

Query: 120 DGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGVAN-YLLQG 178
           +GV  ++       S S +       + N I AA + GVK  VY+SA+     + +LL  
Sbjct: 61  EGVDRLL-----LISPSDLED-RIQQHKNFIDAAKQAGVKHIVYLSASGADEDSPFLLAR 114

Query: 179 YYEGKRAAETELLTR-YPYGGVILRPGF 205
            +    A E  L     PY   ILRPG+
Sbjct: 115 DH---GATEKYLEASGIPY--TILRPGW 137

TMR is an atypical NADP-binding protein of the SDR family. It lacks the active site residues of the SDRs but has a glycine rich NAD(P)-binding motif that matches the extended SDRs. Proteins in this subgroup however, are more similar in length to the classical SDRs. TMR was identified as a reducer of triphenylmethane dyes, important environmental pollutants. This subgroup also includes Escherichia coli NADPH-dependent quinine oxidoreductase (QOR2), which catalyzes two-electron reduction of quinone; but is unlikely to play a major role in protecting against quinone cytotoxicity. Atypical SDRs are distinct from classical SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 272

>gnl|CDD|187575 cd05265, SDR_a1, atypical (a) SDRs, subgroup 1

 Score = 58.1 bits (141), Expect = 6e-10
 Identities = 42/173 (24%), Positives = 65/173 (37%), Gaps = 34/173 (19%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKE 117
           K+L++GG  F+G  +  E L  G  V   +R GR+         V    G+    D+ +E
Sbjct: 2   KILIIGGTRFIGKALVEELLAAGHDVTVFNR-GRTKPDLP--EGVEHIVGDRNDRDALEE 58

Query: 118 ALDGVT--AVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAA----DFG- 170
            L G     V+  +         Y       +     A +  VK++++IS+A      G 
Sbjct: 59  LLGGEDFDVVVDTIA--------YT---PRQVERALDAFKGRVKQYIFISSASVYLKPGR 107

Query: 171 ------------VANYLLQGYY-EGKRAAETELLTRYPYGGVILRPGFIYGTR 210
                                Y  GKRAAE  L+    +   I+RP +IYG  
Sbjct: 108 VITESTPLREPDAVGLSDPWDYGRGKRAAEDVLIEAAAFPYTIVRPPYIYGPG 160

Atypical SDRs in this subgroup are poorly defined and have been identified putatively as isoflavones reductase, sugar dehydratase, mRNA binding protein etc. Atypical SDRs are distinct from classical SDRs. Members of this subgroup retain the canonical active site triad (though not the upstream Asn found in most SDRs) but have an unusual putative glycine-rich NAD(P)-binding motif, GGXXXXG, in the usual location. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 250

>gnl|CDD|187566 cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-epimerase, extended (e) SDRs

 Score = 57.2 bits (139), Expect = 2e-09
 Identities = 35/119 (29%), Positives = 57/119 (47%), Gaps = 10/119 (8%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTVASLSR--SGRSSLRDSWANNVIWHQGNLLSSDSW 115
           ++LV GG GF+GSH+    L+RG  V  L    +G+         NV + +G++   +  
Sbjct: 1   RVLVTGGAGFIGSHLVERLLERGHEVIVLDNLSTGKKENLPEVKPNVKFIEGDIRDDELV 60

Query: 116 KEALDGVTAVISCVGGFGSNS-------YMYKINGTANINAIRAASEKGVKRFVYISAA 167
           + A +GV  V        S           +++N    +N + AA + GVKRFVY S++
Sbjct: 61  EFAFEGVDYVFH-QAAQASVPRSIEDPIKDHEVNVLGTLNLLEAARKAGVKRFVYASSS 118

This subgroup contains UDP-N-acetylglucosamine 4-epimerase of Pseudomonas aeruginosa, WbpP, an extended SDR, that catalyzes the NAD+ dependent conversion of UDP-GlcNAc and UDPGalNA to UDP-Glc and UDP-Gal. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 304

>gnl|CDD|177093 CHL00194, ycf39, Ycf39; Provisional

 Score = 57.3 bits (139), Expect = 2e-09
 Identities = 35/111 (31%), Positives = 57/111 (51%), Gaps = 6/111 (5%)

Query: 59  LLVLGGNGFVGSHICREALDRGLTVASLSRSGRSS--LRDSWANNVIWHQGNLLSSDSWK 116
           LLV+G  G +G  I R+ALD G  V  L R+ R +  L++ W   +++  G+L   ++  
Sbjct: 3   LLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFLKE-WGAELVY--GDLSLPETLP 59

Query: 117 EALDGVTAVISCVGGFGSNSY-MYKINGTANINAIRAASEKGVKRFVYISA 166
            +  GVTA+I       S+ Y   +I+    +  I AA    +KRF++ S 
Sbjct: 60  PSFKGVTAIIDASTSRPSDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSI 110

Length = 317

>gnl|CDD|187673 cd09813, 3b-HSD-NSDHL-like_SDR_e, human NSDHL (NAD(P)H steroid dehydrogenase-like protein)-like, extended (e) SDRs

 Score = 56.2 bits (136), Expect = 4e-09
 Identities = 53/183 (28%), Positives = 74/183 (40%), Gaps = 41/183 (22%)

Query: 60  LVLGGNGFVGSHICREALDRG-LTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEA 118
           LV+GG+GF+G H+  + L RG  TV          L  S +  V +H G+L      ++A
Sbjct: 3   LVVGGSGFLGRHLVEQLLRRGNPTVHVFDIRPTFELDPSSSGRVQFHTGDLTDPQDLEKA 62

Query: 119 LD--GVTAVISC---VGGFGSNSYMYKIN--GTANINAIRAASEKGVKRFVYISAAD--F 169
            +  G   V        G   + Y YK+N  GT N+  I A  + GVK+ VY S+A   F
Sbjct: 63  FNEKGPNVVFHTASPDHGSNDDLY-YKVNVQGTRNV--IEACRKCGVKKLVYTSSASVVF 119

Query: 170 GVANYL------------LQGYYEGKRAAE----------TELLTRYPYGGVILRPGFIY 207
              + +               Y E K  AE          + LLT        LRP  I+
Sbjct: 120 NGQDIINGDESLPYPDKHQDAYNETKALAEKLVLKANDPESGLLT------CALRPAGIF 173

Query: 208 GTR 210
           G  
Sbjct: 174 GPG 176

This subgroup includes human NSDHL and related proteins. These proteins have the characteristic active site tetrad of extended SDRs, and also have a close match to their NAD(P)-binding motif. Human NSDHL is a 3beta-hydroxysteroid dehydrogenase (3 beta-HSD) which functions in the cholesterol biosynthetic pathway. 3 beta-HSD catalyzes the oxidative conversion of delta 5-3 beta-hydroxysteroids to the delta 4-3-keto configuration; this activity is essential for the biosynthesis of all classes of hormonal steroids. Mutations in the gene encoding NSDHL cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. This subgroup also includes an unusual bifunctional [3beta-hydroxysteroid dehydrogenase (3b-HSD)/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 335

>gnl|CDD|219687 pfam07993, NAD_binding_4, Male sterility protein

 Score = 54.1 bits (131), Expect = 1e-08
 Identities = 37/197 (18%), Positives = 54/197 (27%), Gaps = 54/197 (27%)

Query: 63  GGNGFVGSHICREALDRGLTV-------ASLSRSGRSSLRDSWANNVIWHQ--------- 106
           G  GF+G  +  + L     V       A    S    LR       ++ +         
Sbjct: 3   GATGFLGKVLLEKLLRSTPEVKIYCLVRAKDGESALERLRQELLKYGLFDRLKALERIIP 62

Query: 107 --GNL------LSSDSWKEALDGVTAVISC---VGGFGSNSYMYKINGTANINAIRAASE 155
             G+L      LS + ++E  + V  +I     V      S +   N       +R A +
Sbjct: 63  VAGDLSEPNLGLSDEDFQELAEEVDVIIHNAATVNFVEPYSDLRATNVLGTREVLRLAKQ 122

Query: 156 KGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLTRYPYG------------------ 197
                F ++S A     N    G  E K     E       G                  
Sbjct: 123 MKKLPFHHVSTA---YVNGERGGLLEEKPYKLDEDEPALLGGLPNGYTQSKWLAEQLVRE 179

Query: 198 ------GVILRPGFIYG 208
                  VI RP  I G
Sbjct: 180 AAGGLPVVIYRPSIITG 196

This family represents the C-terminal region of the male sterility protein in a number of arabidopsis and drosophila. A sequence-related jojoba acyl CoA reductase is also included. Length = 245

>gnl|CDD|191263 pfam05368, NmrA, NmrA-like family

 Score = 53.8 bits (130), Expect = 1e-08
 Identities = 37/126 (29%), Positives = 50/126 (39%), Gaps = 10/126 (7%)

Query: 59  LLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANN-VIWHQGNLLSSDSWKE 117
           +LV G  G+ G  + R +L  G  V +L R  +S L  S     V   +G+L   +S  E
Sbjct: 1   ILVFGATGYQGGSVVRASLKAGHPVRALVRDPKSELAKSLKAAGVELVEGDLDDHESLVE 60

Query: 118 ALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGVANYLLQ 177
           AL GV  V S  G + S                 AA E GVK F+    ++FG       
Sbjct: 61  ALKGVDVVFSVTGFWLSKEIEDG------KKLADAAKEAGVKHFIP---SEFGNDVDRSN 111

Query: 178 GYYEGK 183
           G     
Sbjct: 112 GVEPAV 117

NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families. Length = 232

>gnl|CDD|178263 PLN02657, PLN02657, 3,8-divinyl protochlorophyllide a 8-vinyl reductase

 Score = 54.8 bits (132), Expect = 1e-08
 Identities = 46/190 (24%), Positives = 85/190 (44%), Gaps = 21/190 (11%)

Query: 3   TIVSRLINSRSSVSRLSAITASGNGRYLSTDSNKVDEPLKVEEAETVNVPPPPSEKLLVL 62
           ++ +    S S  +RL+A +  G     +  +++         A++     P    +LV+
Sbjct: 8   SLRAAAAASSSPSNRLAA-SLGGALVRRAAAASRGSRATAAAAAQSFRSKEPKDVTVLVV 66

Query: 63  GGNGFVGSHICREALDRGLTVASLSR--------SGRSSLRDSWANNVIWHQGNLLSSDS 114
           G  G++G  + RE + RG  V +++R        +G+   +       +   G++  +DS
Sbjct: 67  GATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVV-FGDVTDADS 125

Query: 115 WKEAL----DGVTAVISCV---GGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAA 167
            ++ L    D V  V+SC+    G   +S  +KI+  A  N++ A  E G K FV +SA 
Sbjct: 126 LRKVLFSEGDPVDVVVSCLASRTGGVKDS--WKIDYQATKNSLDAGREVGAKHFVLLSA- 182

Query: 168 DFGVANYLLQ 177
              V   LL+
Sbjct: 183 -ICVQKPLLE 191

Length = 390

>gnl|CDD|224012 COG1087, GalE, UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

 Score = 53.7 bits (130), Expect = 3e-08
 Identities = 37/127 (29%), Positives = 57/127 (44%), Gaps = 15/127 (11%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTVA---SLSRSGRSSLRDSWANNVIWHQGNLLSSDS 114
           K+LV GG G++GSH  R+ L  G  V    +LS   + +L         +++G+LL    
Sbjct: 2   KVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALL---KLQFKFYEGDLLDRAL 58

Query: 115 WKEALD--GVTAVISC-----VGGFGSNSYMYKINGTAN-INAIRAASEKGVKRFVYIS- 165
                +   + AV+       VG    N   Y  N     +N I A  + GVK+F++ S 
Sbjct: 59  LTAVFEENKIDAVVHFAASISVGESVQNPLKYYDNNVVGTLNLIEAMLQTGVKKFIFSST 118

Query: 166 AADFGVA 172
           AA +G  
Sbjct: 119 AAVYGEP 125

Length = 329

>gnl|CDD|187581 cd05273, GME-like_SDR_e, Arabidopsis thaliana GDP-mannose-3',5'-epimerase (GME)-like, extended (e) SDRs

 Score = 52.9 bits (127), Expect = 5e-08
 Identities = 31/119 (26%), Positives = 55/119 (46%), Gaps = 10/119 (8%)

Query: 57  EKLLVLGGNGFVGSHICREALDRGLTV-ASLSRSGRSSLRDSWANNVIWHQGNLLSSDSW 115
           ++ LV G  GF+GSH+       G  V  +  +S     + +  +    H  +L   ++ 
Sbjct: 1   QRALVTGAGGFIGSHLAERLKAEGHYVRGADWKSPEHMTQPTDDDEF--HLVDLREMENC 58

Query: 116 KEALDGVTAVISC---VGGFG----SNSYMYKINGTANINAIRAASEKGVKRFVYISAA 167
            +A +GV  V      +GG G    +++ +   N   N N + AA   GV+RF++ S+A
Sbjct: 59  LKATEGVDHVFHLAADMGGMGYIQSNHAVIMYNNTLINFNMLEAARINGVERFLFASSA 117

This subgroup of NDP-sugar epimerase/dehydratases are extended SDRs; they have the characteristic active site tetrad, and an NAD-binding motif: TGXXGXX[AG], which is a close match to the canonical NAD-binding motif. Members include Arabidopsis thaliana GDP-mannose-3',5'-epimerase (GME) which catalyzes the epimerization of two positions of GDP-alpha-D-mannose to form GDP-beta-L-galactose. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 328

>gnl|CDD|225462 COG2910, COG2910, Putative NADH-flavin reductase [General function prediction only]

 Score = 51.6 bits (124), Expect = 6e-08
 Identities = 34/112 (30%), Positives = 53/112 (47%), Gaps = 9/112 (8%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTVASLSRS-GRSSLRDSWANNVIWHQGNLLSSDSWK 116
           K+ ++G +G  GS I +EAL RG  V ++ R+  + + R      V   Q ++    S  
Sbjct: 2   KIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAARQ----GVTILQKDIFDLTSLA 57

Query: 117 EALDGVTAVISCVG-GFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAA 167
             L G  AVIS  G G   N  ++  +  A I A++ A   GV R + +  A
Sbjct: 58  SDLAGHDAVISAFGAGASDNDELHSKSIEALIEALKGA---GVPRLLVVGGA 106

Length = 211

>gnl|CDD|187558 cd05247, UDP_G4E_1_SDR_e, UDP-glucose 4 epimerase, subgroup 1, extended (e) SDRs

 Score = 52.2 bits (126), Expect = 8e-08
 Identities = 41/135 (30%), Positives = 59/135 (43%), Gaps = 22/135 (16%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTVA---SLSRSGRSSLRDSWANNVIWHQGNLLSSDS 114
           K+LV GG G++GSH   E L+ G  V    +LS   R +L       + +++G++     
Sbjct: 1   KVLVTGGAGYIGSHTVVELLEAGYDVVVLDNLSNGHREALPRIEKIRIEFYEGDIRD--- 57

Query: 115 WKEALDGV------TAVI-----SCVGGFGSN--SYMYKINGTANINAIRAASEKGVKRF 161
            + ALD V       AVI       VG        Y Y  N    +N + A    GVK F
Sbjct: 58  -RAALDKVFAEHKIDAVIHFAALKAVGESVQKPLKY-YDNNVVGTLNLLEAMRAHGVKNF 115

Query: 162 VYIS-AADFGVANYL 175
           V+ S AA +G    +
Sbjct: 116 VFSSSAAVYGEPETV 130

UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 323

>gnl|CDD|187536 cd05193, AR_like_SDR_e, aldehyde reductase, flavonoid reductase, and related proteins, extended (e) SDRs

 Score = 50.7 bits (121), Expect = 3e-07
 Identities = 34/121 (28%), Positives = 52/121 (42%), Gaps = 14/121 (11%)

Query: 60  LVLGGNGFVGSHICREALDRGLTVASLSRSGRS--------SLRDSWANNVIWHQGNLLS 111
           LV G +GFV SH+  + L+RG  V +  R             L        +    +L  
Sbjct: 2   LVTGASGFVASHVVEQLLERGYKVRATVRDPSKVKKVNHLLDLDAKPGRLELA-VADLTD 60

Query: 112 SDSWKEALDGVTAV--ISCVGGFGSN--SYMYKINGTANINAIRAASE-KGVKRFVYISA 166
             S+ E + G   V  ++    F S   + + K      +NA++AA+  K VKRFV  S+
Sbjct: 61  EQSFDEVIKGCAGVFHVATPVSFSSKDPNEVIKPAIGGTLNALKAAAAAKSVKRFVLTSS 120

Query: 167 A 167
           A
Sbjct: 121 A 121

This subgroup contains aldehyde reductase and flavonoid reductase of the extended SDR-type and related proteins. Proteins in this subgroup have a complete SDR-type active site tetrad and a close match to the canonical extended SDR NADP-binding motif. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 295

>gnl|CDD|187561 cd05251, NmrA_like_SDR_a, NmrA (a transcriptional regulator) and HSCARG (an NADPH sensor) like proteins, atypical (a) SDRs

 Score = 50.0 bits (120), Expect = 4e-07
 Identities = 44/155 (28%), Positives = 59/155 (38%), Gaps = 15/155 (9%)

Query: 59  LLVLGGNGFVGSHICREAL-DRGLTVASLSRSGRSSLRDSWAN-NVIWHQGNLLSSDSWK 116
           +LV G  G  G  + R  L D G  V +L+R   S    + A   V   QG+L   +S +
Sbjct: 1   ILVFGATGKQGGSVVRALLKDPGFKVRALTRDPSSPAAKALAAPGVEVVQGDLDDPESLE 60

Query: 117 EALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGVANYLL 176
            AL GV  V   V  F       +I      N + AA   GV+ FV+ S  D      L 
Sbjct: 61  AALKGVYGVFL-VTDFWEAGGEDEI--AQGKNVVDAAKRAGVQHFVFSSVPD-VEKLTLA 116

Query: 177 QGYYEGK----RAAETELLTRYPYGGVILRPGFIY 207
             +++ K           L        ILRP F  
Sbjct: 117 VPHFDSKAEVEEYIRASGLPA-----TILRPAFFM 146

NmrA and HSCARG like proteins. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Atypical SDRs are distinct from classical SDRs. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 242

>gnl|CDD|187567 cd05257, Arna_like_SDR_e, Arna decarboxylase_like, extended (e) SDRs

 Score = 49.6 bits (119), Expect = 6e-07
 Identities = 28/120 (23%), Positives = 48/120 (40%), Gaps = 14/120 (11%)

Query: 58  KLLVLGGNGFVGSHICREALDRG--LTVASLSRSGRSSLRDSWANNVIWH--QGNLLSSD 113
            +LV G +GF+GSH+    L  G  +    +  S  S      A +  +H   G++  + 
Sbjct: 1   NVLVTGADGFIGSHLTERLLREGHEVRALDIYNSFNSWGLLDNAVHDRFHFISGDVRDAS 60

Query: 114 SWKEALDGVTAVI---SCVGGFGSN----SYMYK-INGTANINAIRAASEKGVKRFVYIS 165
             +  +     V    + +    S     SY+   + GT N+  + AA     KR V+ S
Sbjct: 61  EVEYLVKKCDVVFHLAALIAIPYSYTAPLSYVETNVFGTLNV--LEAACVLYRKRVVHTS 118

Decarboxylase domain of ArnA. ArnA, is an enzyme involved in the modification of outer membrane protein lipid A of gram-negative bacteria. It is a bifunctional enzyme that catalyzes the NAD-dependent decarboxylation of UDP-glucuronic acid and N-10-formyltetrahydrofolate-dependent formylation of UDP-4-amino-4-deoxy-l-arabinose; its NAD-dependent decaboxylating activity is in the C-terminal 360 residues. This subgroup belongs to the extended SDR family, however the NAD binding motif is not a perfect match and the upstream Asn of the canonical active site tetrad is not conserved. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 316

>gnl|CDD|187572 cd05262, SDR_a7, atypical (a) SDRs, subgroup 7

 Score = 48.9 bits (117), Expect = 1e-06
 Identities = 32/113 (28%), Positives = 50/113 (44%), Gaps = 8/113 (7%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSS--LRDSWANNVIWHQGNLLSSDSW 115
           K+ V G  GF+GS + RE +  G  V  L+RS   +  L  + A     H+G+L   D  
Sbjct: 2   KVFVTGATGFIGSAVVRELVAAGHEVVGLARSDAGAAKLEAAGA---QVHRGDLEDLDIL 58

Query: 116 KEALDGVTAVISC--VGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISA 166
           ++A     AVI       F + +   +++  A I A+  A     K  +Y S 
Sbjct: 59  RKAAAEADAVIHLAFTHDFDNFAQACEVDRRA-IEALGEALRGTGKPLIYTSG 110

This subgroup contains atypical SDRs of unknown function. Members of this subgroup have a glycine-rich NAD(P)-binding motif consensus that matches the extended SDRs, TGXXGXXG, but lacks the characteristic active site residues of the SDRs. This subgroup has basic residues (HXXXR) in place of the active site motif YXXXK, these may have a catalytic role. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 291

>gnl|CDD|187671 cd09811, 3b-HSD_HSDB1_like_SDR_e, human 3beta-HSD (hydroxysteroid dehydrogenase) and HSD3B1(delta 5-delta 4-isomerase)-like, extended (e) SDRs

 Score = 47.9 bits (114), Expect = 2e-06
 Identities = 37/156 (23%), Positives = 60/156 (38%), Gaps = 23/156 (14%)

Query: 59  LLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWH------------- 105
            LV GG GF+G HI R  L+R   +  +       L  ++   +I H             
Sbjct: 2   CLVTGGGGFLGQHIIRLLLERKEELKEI-----RVLDKAFGPELIEHFEKSQGKTYVTDI 56

Query: 106 QGNLLSSDSWKEALDGVTAVISCVGG---FGSNSY--MYKINGTANINAIRAASEKGVKR 160
           +G++        A  GV+ VI        FG  +Y  + ++N       + A  +  VKR
Sbjct: 57  EGDIKDLSFLFRACQGVSVVIHTAAIVDVFGPPNYEELEEVNVNGTQAVLEACVQNNVKR 116

Query: 161 FVYISAADFGVANYLLQGYYEGKRAAETELLTRYPY 196
            VY S+ +    N+  +  + G      E  +  PY
Sbjct: 117 LVYTSSIEVAGPNFKGRPIFNGVEDTPYEDTSTPPY 152

This extended-SDR subgroup includes human 3 beta-HSD/HSD3B1 and C(27) 3beta-HSD/ [3beta-hydroxy-delta(5)-C(27)-steroid oxidoreductase; HSD3B7], and related proteins. These proteins have the characteristic active site tetrad and NAD(P)-binding motif of extended SDRs. 3 beta-HSD catalyzes the oxidative conversion of delta 5-3 beta-hydroxysteroids to the delta 4-3-keto configuration; this activity is essential for the biosynthesis of all classes of hormonal steroids. C(27) 3beta-HSD is a membrane-bound enzyme of the endoplasmic reticulum, it catalyzes the isomerization and oxidation of 7alpha-hydroxylated sterol intermediates, an early step in bile acid biosynthesis. Mutations in the human gene encoding C(27) 3beta-HSD underlie a rare autosomal recessive form of neonatal cholestasis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 354

>gnl|CDD|213592 TIGR01179, galE, UDP-glucose-4-epimerase GalE

 Score = 47.7 bits (114), Expect = 3e-06
 Identities = 34/122 (27%), Positives = 56/122 (45%), Gaps = 12/122 (9%)

Query: 58  KLLVLGGNGFVGSHICREALDRG---LTVASLSRSGRSSLRD-SWANNVIWHQGNLLSSD 113
           K+LV GG G++GSH  R+ L+ G   + + +LS   R +L        V + +G+L   +
Sbjct: 1   KILVTGGAGYIGSHTVRQLLESGHEVVILDNLSNGSREALPRGERITPVTFVEGDLRDRE 60

Query: 114 SWKEALDG--VTAVI-----SCVGGFGSNSYMYKINGTAN-INAIRAASEKGVKRFVYIS 165
                 +   + AVI       VG        Y  N     +N + A  + GVK+F++ S
Sbjct: 61  LLDRLFEEHKIDAVIHFAGLIAVGESVQKPLKYYRNNVVGTLNLLEAMQQAGVKKFIFSS 120

Query: 166 AA 167
           +A
Sbjct: 121 SA 122

Alternate name: UDPgalactose 4-epimerase This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from This model and described by a separate model [Energy metabolism, Sugars]. Length = 328

>gnl|CDD|187546 cd05235, SDR_e1, extended (e) SDRs, subgroup 1

 Score = 46.9 bits (112), Expect = 4e-06
 Identities = 54/255 (21%), Positives = 86/255 (33%), Gaps = 60/255 (23%)

Query: 60  LVLGGNGFVGSHICREALDRG-------LTVASLSRSGRSSLRD------------SWAN 100
           L+ G  GF+G+++ RE L R        L  A    +    L D               +
Sbjct: 3   LLTGATGFLGAYLLRELLKRKNVSKIYCLVRAKDEEAALERLIDNLKEYGLNLWDELELS 62

Query: 101 NVIWHQGNL------LSSDSWKEALDGVTAVISC---VGGFGSNSYMYKINGTANINAIR 151
            +    G+L      LS D ++E  + V  +I     V        +   N       ++
Sbjct: 63  RIKVVVGDLSKPNLGLSDDDYQELAEEVDVIIHNGANVNWVYPYEELKPANVLGTKELLK 122

Query: 152 AASEKGVKRFVYIS------------------AADFGVANYLLQGYYEGKRAAETELLTR 193
            A+   +K   ++S                         N L  GY + K  AE  L   
Sbjct: 123 LAATGKLKPLHFVSTLSVFSAEEYNALDDEESDDMLESQNGLPNGYIQSKWVAEKLLREA 182

Query: 194 YPYG--GVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVN 251
              G    I+RPG I+G    G        IG+  +   +  K   QL  + P+   P++
Sbjct: 183 ANRGLPVAIIRPGNIFGDSETG--------IGNTDDFFWRLLKGCLQL-GIYPISGAPLD 233

Query: 252 ---VTVVAKVAVRAA 263
              V  VA+  V+ A
Sbjct: 234 LSPVDWVARAIVKLA 248

This family consists of an SDR module of multidomain proteins identified as putative polyketide sythases fatty acid synthases (FAS), and nonribosomal peptide synthases, among others. However, unlike the usual ketoreductase modules of FAS and polyketide synthase, these domains are related to the extended SDRs, and have canonical NAD(P)-binding motifs and an active site tetrad. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 290

>gnl|CDD|187564 cd05254, dTDP_HR_like_SDR_e, dTDP-6-deoxy-L-lyxo-4-hexulose reductase and related proteins, extended (e) SDRs

 Score = 44.9 bits (107), Expect = 2e-05
 Identities = 41/187 (21%), Positives = 63/187 (33%), Gaps = 57/187 (30%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKE 117
           K+L+ G  G +G  + R   +RG  V    RS                + +L   D+ +E
Sbjct: 1   KILITGATGMLGRALVRLLKERGYEVIGTGRS-----------RASLFKLDLTDPDAVEE 49

Query: 118 ALDGV--TAVISCVGGFGSNSYM------------YKINGTANINAIRAASEKGVKRFVY 163
           A+       +I+C        Y             Y++N  A  N  RAA E G  R ++
Sbjct: 50  AIRDYKPDVIINCAA------YTRVDKCESDPELAYRVNVLAPENLARAAKEVGA-RLIH 102

Query: 164 IS----------------AADFGVANYLLQGYY-EGKRAAETELLTRYPYGGVILRPGFI 206
           IS                A +           Y + K   E  +L       +ILR  ++
Sbjct: 103 ISTDYVFDGKKGPYKEEDAPNP-------LNVYGKSKLLGEVAVLN-ANPRYLILRTSWL 154

Query: 207 YGTRTVG 213
           YG    G
Sbjct: 155 YGELKNG 161

dTDP-6-deoxy-L-lyxo-4-hexulose reductase, an extended SDR, synthesizes dTDP-L-rhamnose from alpha-D-glucose-1-phosphate, providing the precursor of L-rhamnose, an essential cell wall component of many pathogenic bacteria. This subgroup has the characteristic active site tetrad and NADP-binding motif. This subgroup also contains human MAT2B, the regulatory subunit of methionine adenosyltransferase (MAT); MAT catalyzes S-adenosylmethionine synthesis. The human gene encoding MAT2B encodes two major splicing variants which are induced in human cell liver cancer and regulate HuR, an mRNA-binding protein which stabilizes the mRNA of several cyclins, to affect cell proliferation. Both MAT2B variants include this extended SDR domain. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 280

>gnl|CDD|187540 cd05229, SDR_a3, atypical (a) SDRs, subgroup 3

 Score = 44.2 bits (105), Expect = 3e-05
 Identities = 19/73 (26%), Positives = 27/73 (36%), Gaps = 3/73 (4%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKE 117
              VLG +G +G  + RE   RG  V  +SRSG           V     + + + S   
Sbjct: 1   TAHVLGASGPIGREVARELRRRGWDVRLVSRSGSKLAWLP---GVEIVAADAMDASSVIA 57

Query: 118 ALDGVTAVISCVG 130
           A  G   +  C  
Sbjct: 58  AARGADVIYHCAN 70

These atypical SDR family members of unknown function have a glycine-rich NAD(P)-binding motif consensus that is very similar to the extended SDRs, GXXGXXG. Generally, this group has poor conservation of the active site tetrad, However, individual sequences do contain matches to the YXXXK active site motif, and generally Tyr or Asn in place of the upstream Ser found in most SDRs. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 302

>gnl|CDD|187661 cd08958, FR_SDR_e, flavonoid reductase (FR), extended (e) SDRs

 Score = 44.1 bits (105), Expect = 3e-05
 Identities = 35/129 (27%), Positives = 57/129 (44%), Gaps = 31/129 (24%)

Query: 61  VLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRD-------------SWANNVIW-HQ 106
           V G +GF+GS + +  L RG TV       R+++RD               A   +   +
Sbjct: 3   VTGASGFIGSWLVKRLLQRGYTV-------RATVRDPGDEKKVAHLLELEGAKERLKLFK 55

Query: 107 GNLLSSDSWKEALDGVTAV--ISCVGGFGSNSY---MYK--INGTANINAIRAASE-KGV 158
            +LL   S+  A+DG   V  ++    F S      M +  + GT  +N + A ++ K V
Sbjct: 56  ADLLDYGSFDAAIDGCDGVFHVASPVDFDSEDPEEEMIEPAVKGT--LNVLEACAKAKSV 113

Query: 159 KRFVYISAA 167
           KR V+ S+ 
Sbjct: 114 KRVVFTSSV 122

This subgroup contains FRs of the extended SDR-type and related proteins. These FRs act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites; they have the characteristic active site triad of the SDRs (though not the upstream active site Asn) and a NADP-binding motif that is very similar to the typical extended SDR motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|178298 PLN02695, PLN02695, GDP-D-mannose-3',5'-epimerase

 Score = 43.3 bits (102), Expect = 7e-05
 Identities = 40/126 (31%), Positives = 57/126 (45%), Gaps = 12/126 (9%)

Query: 52  PPPPSEKL--LVLGGNGFVGSHICREALDRG-LTVASLSRSGRSSLRDSWANNVIWHQGN 108
           P  PSEKL   + G  GF+ SHI R     G   +AS  +       D + +   +H  +
Sbjct: 15  PYWPSEKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHMSEDMFCHE--FHLVD 72

Query: 109 LLSSDSWKEALDGVTAVISC---VGGFG---SNSYMYKINGTA-NINAIRAASEKGVKRF 161
           L   ++  +   GV  V +    +GG G   SN  +   N T  + N + AA   GVKRF
Sbjct: 73  LRVMENCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEAARINGVKRF 132

Query: 162 VYISAA 167
            Y S+A
Sbjct: 133 FYASSA 138

Length = 370

>gnl|CDD|187553 cd05242, SDR_a8, atypical (a) SDRs, subgroup 8

 Score = 41.8 bits (99), Expect = 2e-04
 Identities = 22/69 (31%), Positives = 29/69 (42%), Gaps = 7/69 (10%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKE 117
           K+++ GG GF+G  + R     G  V  LSR    +     A  + W     LS   W  
Sbjct: 1   KIVITGGTGFIGRALTRRLTAAGHEVVVLSRRPGKAEGL--AEVITWDG---LSLGPW-- 53

Query: 118 ALDGVTAVI 126
            L G  AVI
Sbjct: 54  ELPGADAVI 62

This subgroup contains atypical SDRs of unknown function. Proteins in this subgroup have a glycine-rich NAD(P)-binding motif consensus that resembles that of the extended SDRs, (GXXGXXG or GGXGXXG), but lacks the characteristic active site residues of the SDRs. A Cys often replaces the usual Lys of the YXXXK active site motif, while the upstream Ser is generally present and Arg replaces the usual Asn. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 296

>gnl|CDD|224016 COG1091, RfbD, dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

 Score = 41.5 bits (98), Expect = 2e-04
 Identities = 41/172 (23%), Positives = 63/172 (36%), Gaps = 40/172 (23%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKE 117
           K+L+ G NG +G+ + R AL     V +  R                 + ++   D+  E
Sbjct: 2   KILITGANGQLGTELRR-ALPGEFEVIATDR----------------AELDITDPDAVLE 44

Query: 118 ALDGV--TAVISC-----VGGFGSNSYM-YKINGTANINAIRAASEKGVKRFVYISAADF 169
            +       VI+      V    S   + + +N T   N  RAA+E G  R V+IS  D+
Sbjct: 45  VIRETRPDVVINAAAYTAVDKAESEPELAFAVNATGAENLARAAAEVGA-RLVHIS-TDY 102

Query: 170 -----GVANYLL------QGYY-EGKRAAETELLTRYPYGGVILRPGFIYGT 209
                    Y           Y   K A E  +    P   +ILR  ++YG 
Sbjct: 103 VFDGEKGGPYKETDTPNPLNVYGRSKLAGEEAVRAAGPR-HLILRTSWVYGE 153

Length = 281

>gnl|CDD|187577 cd05267, SDR_a6, atypical (a) SDRs, subgroup 6

 Score = 40.8 bits (96), Expect = 2e-04
 Identities = 35/141 (24%), Positives = 59/141 (41%), Gaps = 18/141 (12%)

Query: 58  KLLVLGGNGFVGSHICREALDRGL--TVASLSRSGRSSLR--DSWANNVIWHQGNLLSSD 113
           K+L+LG NG     I REA    L  +   L+   R++ R     +  V   +G+ L+SD
Sbjct: 2   KVLILGANG----EIAREATTMLLENSNVELTLFLRNAHRLLHLKSARVTVVEGDALNSD 57

Query: 114 SWKEALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGVAN 173
             K A+ G   V + +GG                N ++A    GVKR ++ ++   G+ +
Sbjct: 58  DLKAAMRGQDVVYANLGGTDL--------DQQAENVVQAMKAVGVKRLIWTTS--LGIYD 107

Query: 174 YLLQGYYEGKRAAETELLTRY 194
            +   + E  +      L  Y
Sbjct: 108 EVPGKFGEWNKEFIGNYLAPY 128

These atypical SDR family members of unknown function have only a partial match to a prototypical glycine-rich NAD(P)-binding motif consensus, GXXG, which conserves part of the motif of extended SDR. Furthermore, they lack the characteristic active site residues of the SDRs. This subgroup is related to phenylcoumaran benzylic ether reductase, an NADPH-dependent aromatic alcohol reductase. One member is identified as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 203

>gnl|CDD|225857 COG3320, COG3320, Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

 Score = 41.2 bits (97), Expect = 4e-04
 Identities = 44/198 (22%), Positives = 65/198 (32%), Gaps = 47/198 (23%)

Query: 58  KLLVLGGNGFVGSHICREALDR------GLTVASLSRSGRSSLRD----------SWANN 101
            +L+ G  GF+G+++  E LDR       L  A    +  + L              A+ 
Sbjct: 2   NVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADR 61

Query: 102 VIWHQGNL------LSSDSWKEALDGVTAVISC---VGGFGSNSYMYKINGTANINAIRA 152
           V    G+L      LS  +W+E  + V  +I     V      S +   N       +R 
Sbjct: 62  VEVVAGDLAEPDLGLSERTWQELAENVDLIIHNAALVNHVFPYSELRGANVLGTAEVLRL 121

Query: 153 ASEKGVKRFVYISA--------------------ADFGVANYLLQGYYEGKRAAETELLT 192
           A+    K   Y+S+                        V   L  GY   K  AE  +  
Sbjct: 122 AATGKPKPLHYVSSISVGETEYYSNFTVDFDEISPTRNVGQGLAGGYGRSKWVAEKLVRE 181

Query: 193 RYPYG--GVILRPGFIYG 208
               G    I RPG+I G
Sbjct: 182 AGDRGLPVTIFRPGYITG 199

Length = 382

>gnl|CDD|181609 PRK09009, PRK09009, C factor cell-cell signaling protein; Provisional

 Score = 40.4 bits (95), Expect = 4e-04
 Identities = 20/76 (26%), Positives = 38/76 (50%), Gaps = 4/76 (5%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWK- 116
            +L++GG+G +G  + ++ L+R    A++  + R    D   +NV WH  ++      K 
Sbjct: 2   NILIVGGSGGIGKAMVKQLLER-YPDATVHATYRHHKPDFQHDNVQWHALDVTDEAEIKQ 60

Query: 117 --EALDGVTAVISCVG 130
             E    +  +I+CVG
Sbjct: 61  LSEQFTQLDWLINCVG 76

Length = 235

>gnl|CDD|234294 TIGR03649, ergot_EASG, ergot alkaloid biosynthesis protein, AFUA_2G17970 family

 Score = 40.4 bits (95), Expect = 6e-04
 Identities = 55/221 (24%), Positives = 74/221 (33%), Gaps = 44/221 (19%)

Query: 59  LLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRD-------SWANNVIWHQGNLLS 111
           +L+ GG G   S I R      +     SRS  SS           W +   W   N  S
Sbjct: 2   ILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSAGPNEKHVKFDWLDEDTWD--NPFS 59

Query: 112 SDSWKEALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAADF-- 169
           SD      DG+   IS V                 I  I  A  KGV+RFV +SA+    
Sbjct: 60  SD------DGMEPEISAVYLVAPPIPDL---APPMIKFIDFARSKGVRRFVLLSASIIEK 110

Query: 170 -GVANYLLQGYYEGKRAAETELLTRYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEM 228
            G A   +  + +     E            +LRP     T  +        V     E 
Sbjct: 111 GGPAMGQVHAHLDSLGGVEY----------TVLRP-----TWFMENFSEEFHVEAIRKEN 155

Query: 229 VLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDPVFP 269
            +  A    ++P         V+   +A+VA RA TD V P
Sbjct: 156 KIYSATGDGKIPF--------VSADDIARVAYRALTDKVAP 188

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi. Length = 285

>gnl|CDD|187542 cd05231, NmrA_TMR_like_1_SDR_a, NmrA (a transcriptional regulator) and triphenylmethane reductase (TMR) like proteins, subgroup 1, atypical (a) SDRs

 Score = 39.2 bits (92), Expect = 0.001
 Identities = 57/229 (24%), Positives = 88/229 (38%), Gaps = 38/229 (16%)

Query: 59  LLVLGGNGFVGSHICREALDRGLTVASLSRSGR--SSLRDSWANNVIWHQGNLLSSDSWK 116
           +LV G  G +GS +    L+ G  V +L RS    ++L    A  V+   G+L       
Sbjct: 1   ILVTGATGRIGSKVATTLLEAGRPVRALVRSDERAAALAARGAEVVV---GDLDDPAVLA 57

Query: 117 EALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISA--ADFGVANY 174
            AL GV AV        +          A   A  A  E GVKR V +S+  AD    + 
Sbjct: 58  AALAGVDAVFFLAPPAPTADARPGYVQAAEAFA-SALREAGVKRVVNLSSVGADPESPSG 116

Query: 175 LLQGYYEGKRAAETELLTRYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAK 234
           L++G++  ++      L       V LRP +                    ME +L  A 
Sbjct: 117 LIRGHWLMEQV-----LNWAGLPVVHLRPAWF-------------------MENLLSQAP 152

Query: 235 PLSQ-----LPLVGPLFTPPVNVTVVAKVAVRAATDPVFPPG-IVDVHG 277
            + +     LP  G    PP+    +A+VA +   DP +    + ++ G
Sbjct: 153 SIRKAGVLALPFPGDGRLPPIATDDIARVAAKLLLDPEWHGHRVYELTG 201

Atypical SDRs related to NMRa, TMR, and HSCARG (an NADPH sensor). This subgroup resembles the SDRs and has a partially conserved characteristic [ST]GXXGXXG NAD-binding motif, but lacks the conserved active site residues. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Atypical SDRs are distinct from classical SDRs. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 259

>gnl|CDD|187557 cd05246, dTDP_GD_SDR_e, dTDP-D-glucose 4,6-dehydratase, extended (e) SDRs

 Score = 38.3 bits (90), Expect = 0.003
 Identities = 33/130 (25%), Positives = 52/130 (40%), Gaps = 29/130 (22%)

Query: 58  KLLVLGGNGFVGSHICREALDRG----------LTVASLSRSGRSSLRDSWAN-NVIWHQ 106
           K+LV GG GF+GS+  R  L++           LT A        +L D  ++    + +
Sbjct: 2   KILVTGGAGFIGSNFVRYLLNKYPDYKIINLDKLTYA----GNLENLEDVSSSPRYRFVK 57

Query: 107 GNLLSSDSWKEAL--DGVTAVISCVG------GFGSNSYMYKIN--GTANI-NAIRAASE 155
           G++  ++        + + AVI                   + N  GT  +  A R    
Sbjct: 58  GDICDAELVDRLFEEEKIDAVIHFAAESHVDRSISDPEPFIRTNVLGTYTLLEAARKY-- 115

Query: 156 KGVKRFVYIS 165
            GVKRFV+IS
Sbjct: 116 -GVKRFVHIS 124

This subgroup contains dTDP-D-glucose 4,6-dehydratase and related proteins, members of the extended-SDR family, with the characteristic Rossmann fold core region, active site tetrad and NAD(P)-binding motif. dTDP-D-glucose 4,6-dehydratase is closely related to other sugar epimerases of the SDR family. dTDP-D-dlucose 4,6,-dehydratase catalyzes the second of four steps in the dTDP-L-rhamnose pathway (the dehydration of dTDP-D-glucose to dTDP-4-keto-6-deoxy-D-glucose) in the synthesis of L-rhamnose, a cell wall component of some pathogenic bacteria. In many gram negative bacteria, L-rhamnose is an important constituent of lipopoylsaccharide O-antigen. The larger N-terminal portion of dTDP-D-Glucose 4,6-dehydratase forms a Rossmann fold NAD-binding domain, while the C-terminus binds the sugar substrate. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 315

>gnl|CDD|200431 TIGR04180, EDH_00030, NAD dependent epimerase/dehydratase, LLPSF_EDH_00030 family

 Score = 38.1 bits (89), Expect = 0.003
 Identities = 48/185 (25%), Positives = 82/185 (44%), Gaps = 41/185 (22%)

Query: 60  LVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWA----------NNVIWHQGNL 109
           LV G +GF+GSH+    + +G  V +          +SW           + +    G++
Sbjct: 2   LVTGADGFIGSHLVEALVRQGYEVRAFVLYNS---FNSWGWLDTSPPEVKDKIEVVTGDI 58

Query: 110 LSSDSWKEALDGVTAV------ISCVGGFGS-NSYM-YKINGTANINAIRAASEKGVKRF 161
              DS ++A+ G   V      I+    + + +SY+   + GT N+  ++AA + GV++ 
Sbjct: 59  RDPDSVRKAMKGCDVVFHLAALIAIPYSYIAPDSYVDTNVTGTLNV--LQAARDLGVEKV 116

Query: 162 VYISAAD-FGVANYL-------LQG---YYEGKRAAETELLTRY-----PYGGVILRPGF 205
           V+ S ++ +G A Y+       LQG   Y   K  A+   L+ Y     P    I+RP  
Sbjct: 117 VHTSTSEVYGTAQYVPIDEKHPLQGQSPYSASKIGADQLALSFYRSFNTPV--TIIRPFN 174

Query: 206 IYGTR 210
            YG R
Sbjct: 175 TYGPR 179

This clade within the NAD dependent epimerase/dehydratase superfamily (pfam01370) is characterized by inclusion of its members within a cassette of seven distinctive enzymes. These include four genes homologous to the elements of the neuraminic (sialic) acid biosynthesis cluster (NeuABCD), an aminotransferase and a nucleotidyltransferase in addition to the epimerase/dehydratase. Together it is very likely that these enzymes direct the biosynthesis of a nine-carbon sugar analagous to CMP-neuraminic acid. These seven genes form the core of the cassette, although they are often accompanied by additional genes that may further modify the product sugar. Although this cassette is widely distributed in bacteria, the family nomenclature arises from the instance in Leptospira interrogans serovar Lai, str. 56601, where it appears as the 30th gene in the 91-gene lipopolysaccharide biosynthesis cluster. Length = 297

>gnl|CDD|187550 cd05239, GDP_FS_SDR_e, GDP-fucose synthetase, extended (e) SDRs

 Score = 37.9 bits (89), Expect = 0.003
 Identities = 30/119 (25%), Positives = 44/119 (36%), Gaps = 30/119 (25%)

Query: 58  KLLVLGGNGFVGSHICREALDRG---LTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDS 114
           K+LV G  G VGS I R    RG   +   +        L             +L   ++
Sbjct: 1   KILVTGHRGLVGSAIVRVLARRGYENVVFRT-----SKEL-------------DLTDQEA 42

Query: 115 WKEALDGV--TAVISC---VGG-FGSNSY---MYKINGTANINAIRAASEKGVKRFVYI 164
            +   +      VI     VGG   + +Y     + N   N N I AA   GVK+ V++
Sbjct: 43  VRAFFEKEKPDYVIHLAAKVGGIVANMTYPADFLRDNLLINDNVIHAAHRFGVKKLVFL 101

GDP-fucose synthetase (aka 3, 5-epimerase-4-reductase) acts in the NADP-dependent synthesis of GDP-fucose from GDP-mannose. Two activities have been proposed for the same active site: epimerization and reduction. Proteins in this subgroup are extended SDRs, which have a characteristic active site tetrad and an NADP-binding motif, [AT]GXXGXXG, that is a close match to the archetypical form. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 300

>gnl|CDD|187545 cd05234, UDP_G4E_2_SDR_e, UDP-glucose 4 epimerase, subgroup 2, extended (e) SDRs

 Score = 37.7 bits (88), Expect = 0.004
 Identities = 31/122 (25%), Positives = 49/122 (40%), Gaps = 19/122 (15%)

Query: 60  LVLGGNGFVGSHICREALDRGLTVA---SLSRSGRSSLRDSWAN-NVIWHQGNLLSSDSW 115
           LV GG GF+GSH+    L+ G  V    +LS   R ++   + N    + + +LL +   
Sbjct: 3   LVTGGAGFIGSHLVDRLLEEGNEVVVVDNLSSGRRENIEPEFENKAFRFVKRDLLDTADK 62

Query: 116 KEALDGVTAVISCVGGFGSNSYM----------YKINGTANINAIRAASEKGVKRFVYIS 165
             A      V        +N  +           + N  A  N + A    GVKR V+ S
Sbjct: 63  V-AKKDGDTVFH----LAANPDVRLGATDPDIDLEENVLATYNVLEAMRANGVKRIVFAS 117

Query: 166 AA 167
           ++
Sbjct: 118 SS 119

UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of archaeal and bacterial proteins, and has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305

>gnl|CDD|233570 TIGR01777, yfcH, TIGR01777 family protein

 Score = 37.6 bits (88), Expect = 0.004
 Identities = 50/210 (23%), Positives = 72/210 (34%), Gaps = 48/210 (22%)

Query: 60  LVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEAL 119
           L+ GG GF+G  + +    RG  V  L+RS        W     W       +    ++L
Sbjct: 2   LITGGTGFIGRALTQRLTKRGHEVTILTRSPPPGANTKWEGYKPW-------AGEDADSL 54

Query: 120 DGVTAVISCVG----------GFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAADF 169
           +G  AVI+  G                   +I+ T  +    AA+E+  K F+  SA   
Sbjct: 55  EGADAVINLAGEPIADKRWTEERKQEIRDSRIDTTRLLVEAIAAAEQKPKVFISASAV-- 112

Query: 170 GVANYLLQGYY---EGKRAAETELLTRYPYGGVIL-----------RPGFIYGTRTVGGM 215
                   GYY   E +   E +     P G   L           +     GTR V   
Sbjct: 113 --------GYYGPSEDREYTEED----SPAGDDFLAELCRDWEEAAQAAEDLGTRVV--- 157

Query: 216 KLPLGVIGSPMEMVLQHAKPLSQLPLVGPL 245
            L  G++  P    L       +L L GPL
Sbjct: 158 LLRTGIVLGPKGGALAKMLLPFRLGLGGPL 187

This model represents a clade of proteins of unknown function including the E. coli yfcH protein [Hypothetical proteins, Conserved]. Length = 291

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	286
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	100.0
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	100.0
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	100.0
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	100.0
PLN02427	386	UDP-apiose/xylose synthase	100.0
CHL00194	317	ycf39 Ycf39; Provisional	100.0
PLN02214	342	cinnamoyl-CoA reductase	100.0
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	100.0
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	100.0
PLN02572	442	UDP-sulfoquinovose synthase	100.0
PLN02695	370	GDP-D-mannose-3',5'-epimerase	100.0
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	99.98
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	99.98
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	99.98
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	99.98
PLN00198	338	anthocyanidin reductase; Provisional	99.98
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	99.97
PLN02166	436	dTDP-glucose 4,6-dehydratase	99.97
PLN02206	442	UDP-glucuronate decarboxylase	99.97
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	99.97
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	99.97
PLN02260	668	probable rhamnose biosynthetic enzyme	99.97
PLN02650	351	dihydroflavonol-4-reductase	99.97
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	99.97
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.97
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	99.97
PLN02686	367	cinnamoyl-CoA reductase	99.97
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	99.97
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	99.97
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	99.97
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	99.97
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	99.97
PLN02896	353	cinnamyl-alcohol dehydrogenase	99.97
PLN02996	491	fatty acyl-CoA reductase	99.96
PLN02583	297	cinnamoyl-CoA reductase	99.96
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	99.96
TIGR01746	367	Thioester-redct thioester reductase domain. It has	99.96
PLN00016	378	RNA-binding protein; Provisional	99.96
PRK07201	657	short chain dehydrogenase; Provisional	99.96
PRK10675	338	UDP-galactose-4-epimerase; Provisional	99.96
PLN02240	352	UDP-glucose 4-epimerase	99.96
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	99.96
PLN02653	340	GDP-mannose 4,6-dehydratase	99.96
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	99.96
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	99.96
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	99.96
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	99.96
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	99.96
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	99.96
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.95
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	99.95
PRK05865	854	hypothetical protein; Provisional	99.95
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	99.95
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.95
COG3320	382	Putative dehydrogenase domain of multifunctional n	99.95
KOG0747	331	consensus Putative NAD+-dependent epimerases [Carb	99.95
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.95
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	99.95
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.94
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	99.94
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	99.94
PLN03209	576	translocon at the inner envelope of chloroplast su	99.93
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	99.93
PLN02778	298	3,5-epimerase/4-reductase	99.93
PRK12320	699	hypothetical protein; Provisional	99.93
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	99.92
PLN02503	605	fatty acyl-CoA reductase 2	99.92
KOG4288	283	consensus Predicted oxidoreductase [General functi	99.92
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	99.91
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.91
PRK06482	276	short chain dehydrogenase; Provisional	99.91
PRK09135	249	pteridine reductase; Provisional	99.9
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	99.9
PRK06180	277	short chain dehydrogenase; Provisional	99.9
PRK07806	248	short chain dehydrogenase; Provisional	99.9
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	99.9
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	99.9
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	99.9
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	99.9
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.89
PRK12828	239	short chain dehydrogenase; Provisional	99.89
PLN02260	668	probable rhamnose biosynthetic enzyme	99.89
PRK08263	275	short chain dehydrogenase; Provisional	99.89
PRK07067	257	sorbitol dehydrogenase; Provisional	99.89
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.88
PRK06914	280	short chain dehydrogenase; Provisional	99.88
PRK12829	264	short chain dehydrogenase; Provisional	99.88
PRK07523	255	gluconate 5-dehydrogenase; Provisional	99.88
PRK05875	276	short chain dehydrogenase; Provisional	99.88
PRK09134	258	short chain dehydrogenase; Provisional	99.87
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.87
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	99.87
PRK07775	274	short chain dehydrogenase; Provisional	99.87
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	99.87
PRK12827	249	short chain dehydrogenase; Provisional	99.87
PRK06182	273	short chain dehydrogenase; Validated	99.87
PRK07774	250	short chain dehydrogenase; Provisional	99.87
PRK07060	245	short chain dehydrogenase; Provisional	99.87
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.86
PRK06179	270	short chain dehydrogenase; Provisional	99.86
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	99.86
PRK09291	257	short chain dehydrogenase; Provisional	99.86
PRK12746	254	short chain dehydrogenase; Provisional	99.86
PRK07074	257	short chain dehydrogenase; Provisional	99.86
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.86
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	99.86
PRK06128	300	oxidoreductase; Provisional	99.86
PRK07890	258	short chain dehydrogenase; Provisional	99.86
PRK12935	247	acetoacetyl-CoA reductase; Provisional	99.86
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.86
PRK05717	255	oxidoreductase; Validated	99.86
PRK06138	252	short chain dehydrogenase; Provisional	99.86
PRK05993	277	short chain dehydrogenase; Provisional	99.86
PRK08219	227	short chain dehydrogenase; Provisional	99.86
PRK10538	248	malonic semialdehyde reductase; Provisional	99.86
PRK12939	250	short chain dehydrogenase; Provisional	99.85
PRK06123	248	short chain dehydrogenase; Provisional	99.85
PRK05876	275	short chain dehydrogenase; Provisional	99.85
PLN02253	280	xanthoxin dehydrogenase	99.85
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	99.85
PRK08628	258	short chain dehydrogenase; Provisional	99.85
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	99.85
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.85
PRK06523	260	short chain dehydrogenase; Provisional	99.85
PRK06398	258	aldose dehydrogenase; Validated	99.85
PRK07454	241	short chain dehydrogenase; Provisional	99.85
PRK07024	257	short chain dehydrogenase; Provisional	99.85
PRK12824	245	acetoacetyl-CoA reductase; Provisional	99.84
PRK06181	263	short chain dehydrogenase; Provisional	99.84
PRK07326	237	short chain dehydrogenase; Provisional	99.84
PRK07904	253	short chain dehydrogenase; Provisional	99.84
PRK08643	256	acetoin reductase; Validated	99.84
PRK06841	255	short chain dehydrogenase; Provisional	99.84
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	99.84
PRK07856	252	short chain dehydrogenase; Provisional	99.84
PRK07825	273	short chain dehydrogenase; Provisional	99.84
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	99.84
PRK09186	256	flagellin modification protein A; Provisional	99.84
PRK07577	234	short chain dehydrogenase; Provisional	99.84
PRK06701	290	short chain dehydrogenase; Provisional	99.84
PRK06101	240	short chain dehydrogenase; Provisional	99.84
PRK12937	245	short chain dehydrogenase; Provisional	99.84
COG2910	211	Putative NADH-flavin reductase [General function p	99.84
PRK06483	236	dihydromonapterin reductase; Provisional	99.83
PRK12743	256	oxidoreductase; Provisional	99.83
PRK06500	249	short chain dehydrogenase; Provisional	99.83
PRK08264	238	short chain dehydrogenase; Validated	99.83
PRK07102	243	short chain dehydrogenase; Provisional	99.83
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.83
PRK08265	261	short chain dehydrogenase; Provisional	99.83
PRK08213	259	gluconate 5-dehydrogenase; Provisional	99.83
PRK08324	681	short chain dehydrogenase; Validated	99.83
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	99.83
PRK08017	256	oxidoreductase; Provisional	99.83
PRK12742	237	oxidoreductase; Provisional	99.83
PRK08251	248	short chain dehydrogenase; Provisional	99.83
PRK07814	263	short chain dehydrogenase; Provisional	99.83
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.83
PRK07063	260	short chain dehydrogenase; Provisional	99.82
PRK07041	230	short chain dehydrogenase; Provisional	99.82
PRK07478	254	short chain dehydrogenase; Provisional	99.82
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	99.82
PRK12744	257	short chain dehydrogenase; Provisional	99.82
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	99.82
PRK08085	254	gluconate 5-dehydrogenase; Provisional	99.82
PRK07023	243	short chain dehydrogenase; Provisional	99.82
PRK08277	278	D-mannonate oxidoreductase; Provisional	99.82
PRK06057	255	short chain dehydrogenase; Provisional	99.82
PRK06124	256	gluconate 5-dehydrogenase; Provisional	99.82
PRK06114	254	short chain dehydrogenase; Provisional	99.82
PRK06194	287	hypothetical protein; Provisional	99.82
PRK05650	270	short chain dehydrogenase; Provisional	99.82
PRK05693	274	short chain dehydrogenase; Provisional	99.82
PRK07985	294	oxidoreductase; Provisional	99.82
PRK12747	252	short chain dehydrogenase; Provisional	99.81
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	99.81
PRK07035	252	short chain dehydrogenase; Provisional	99.81
PRK08267	260	short chain dehydrogenase; Provisional	99.81
PRK06947	248	glucose-1-dehydrogenase; Provisional	99.81
PRK05866	293	short chain dehydrogenase; Provisional	99.81
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.81
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	99.81
PRK07097	265	gluconate 5-dehydrogenase; Provisional	99.81
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.81
KOG1431	315	consensus GDP-L-fucose synthetase [Carbohydrate tr	99.81
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	99.81
PRK05867	253	short chain dehydrogenase; Provisional	99.81
PRK12938	246	acetyacetyl-CoA reductase; Provisional	99.8
PRK06949	258	short chain dehydrogenase; Provisional	99.8
PRK08589	272	short chain dehydrogenase; Validated	99.8
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.8
PRK09242	257	tropinone reductase; Provisional	99.8
PRK08339	263	short chain dehydrogenase; Provisional	99.8
PRK06924	251	short chain dehydrogenase; Provisional	99.8
PRK07109	334	short chain dehydrogenase; Provisional	99.8
COG0300	265	DltE Short-chain dehydrogenases of various substra	99.8
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	99.8
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	99.8
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.8
PRK08226	263	short chain dehydrogenase; Provisional	99.79
PRK06198	260	short chain dehydrogenase; Provisional	99.79
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.79
PRK07677	252	short chain dehydrogenase; Provisional	99.79
TIGR02415	254	23BDH acetoin reductases. One member of this famil	99.79
PRK07576	264	short chain dehydrogenase; Provisional	99.79
PRK08703	239	short chain dehydrogenase; Provisional	99.79
PRK06196	315	oxidoreductase; Provisional	99.79
PRK06172	253	short chain dehydrogenase; Provisional	99.79
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	99.78
PRK07453	322	protochlorophyllide oxidoreductase; Validated	99.78
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	99.78
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	99.78
PRK07069	251	short chain dehydrogenase; Validated	99.78
PRK08278	273	short chain dehydrogenase; Provisional	99.78
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.78
PRK05884	223	short chain dehydrogenase; Provisional	99.78
PRK06139	330	short chain dehydrogenase; Provisional	99.78
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	99.78
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	99.77
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	99.77
PRK06484	520	short chain dehydrogenase; Validated	99.77
PRK07062	265	short chain dehydrogenase; Provisional	99.77
PRK09072	263	short chain dehydrogenase; Provisional	99.77
PRK07578	199	short chain dehydrogenase; Provisional	99.77
PRK08936	261	glucose-1-dehydrogenase; Provisional	99.77
PRK07831	262	short chain dehydrogenase; Provisional	99.77
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	99.77
PRK12367	245	short chain dehydrogenase; Provisional	99.77
PRK07832	272	short chain dehydrogenase; Provisional	99.77
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	99.76
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	99.76
PRK05872	296	short chain dehydrogenase; Provisional	99.76
PRK06953	222	short chain dehydrogenase; Provisional	99.76
PRK08340	259	glucose-1-dehydrogenase; Provisional	99.75
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	99.75
PRK06940	275	short chain dehydrogenase; Provisional	99.75
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.75
PRK06125	259	short chain dehydrogenase; Provisional	99.75
PRK07791	286	short chain dehydrogenase; Provisional	99.74
PRK08177	225	short chain dehydrogenase; Provisional	99.74
PRK07201	657	short chain dehydrogenase; Provisional	99.74
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.74
PRK06197	306	short chain dehydrogenase; Provisional	99.74
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	99.73
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	99.73
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	99.72
PRK09009	235	C factor cell-cell signaling protein; Provisional	99.72
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	99.72
PRK05855	582	short chain dehydrogenase; Validated	99.72
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	99.71
PRK05854	313	short chain dehydrogenase; Provisional	99.7
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.7
PRK05599	246	hypothetical protein; Provisional	99.7
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	99.7
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	99.7
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.69
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	99.69
PLN02780	320	ketoreductase/ oxidoreductase	99.69
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	99.69
KOG4039	238	consensus Serine/threonine kinase TIP30/CC3 [Signa	99.68
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.68
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.68
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	99.68
PRK06484	520	short chain dehydrogenase; Validated	99.67
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.67
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	99.65
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	99.62
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	99.61
KOG0725	270	consensus Reductases with broad range of substrate	99.6
PRK08862	227	short chain dehydrogenase; Provisional	99.59
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	99.59
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	99.57
PRK08303	305	short chain dehydrogenase; Provisional	99.57
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	99.56
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	99.56
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	99.52
KOG2774	366	consensus NAD dependent epimerase [General functio	99.52
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	99.52
PLN00015	308	protochlorophyllide reductase	99.51
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	99.51
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	99.5
KOG1611	249	consensus Predicted short chain-type dehydrogenase	99.5
COG1028	251	FabG Dehydrogenases with different specificities (	99.48
KOG1208	314	consensus Dehydrogenases with different specificit	99.47
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	99.45
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	99.43
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	99.41
KOG1372	376	consensus GDP-mannose 4,6 dehydratase [Carbohydrat	99.41
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	99.34
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	99.32
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	99.3
PRK08309	177	short chain dehydrogenase; Provisional	99.23
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	99.15
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	99.1
PTZ00325	321	malate dehydrogenase; Provisional	99.03
KOG3019	315	consensus Predicted nucleoside-diphosphate sugar e	99.01
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	98.94
KOG1204	253	consensus Predicted dehydrogenase [Secondary metab	98.91
PLN00106	323	malate dehydrogenase	98.85
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	98.84
PRK06720	169	hypothetical protein; Provisional	98.8
KOG1478	341	consensus 3-keto sterol reductase [Lipid transport	98.75
PRK09620	229	hypothetical protein; Provisional	98.71
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	98.68
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	98.66
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	98.64
PRK05086	312	malate dehydrogenase; Provisional	98.63
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	98.6
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	98.56
KOG2733	423	consensus Uncharacterized membrane protein [Functi	98.49
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	98.42
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	98.36
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	98.34
PLN02968	381	Probable N-acetyl-gamma-glutamyl-phosphate reducta	98.32
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	98.29
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	98.28
COG0569	225	TrkA K+ transport systems, NAD-binding component [	98.14
PRK14982	340	acyl-ACP reductase; Provisional	98.12
PRK14874	334	aspartate-semialdehyde dehydrogenase; Provisional	98.11
COG3268	382	Uncharacterized conserved protein [Function unknow	98.07
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	98.06
PRK05671	336	aspartate-semialdehyde dehydrogenase; Reviewed	97.99
PRK12548	289	shikimate 5-dehydrogenase; Provisional	97.97
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	97.95
PRK00436	343	argC N-acetyl-gamma-glutamyl-phosphate reductase;	97.93
PF01118	121	Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi	97.92
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	97.89
PRK09496	453	trkA potassium transporter peripheral membrane com	97.88
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	97.85
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	97.84
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	97.82
TIGR01296	339	asd_B aspartate-semialdehyde dehydrogenase (peptid	97.75
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	97.73
PRK00048	257	dihydrodipicolinate reductase; Provisional	97.73
TIGR01850	346	argC N-acetyl-gamma-glutamyl-phosphate reductase,	97.71
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	97.7
cd01337	310	MDH_glyoxysomal_mitochondrial Glyoxysomal and mito	97.7
TIGR01759	323	MalateDH-SF1 malate dehydrogenase. This model repr	97.69
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.69
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	97.65
TIGR01772	312	MDH_euk_gproteo malate dehydrogenase, NAD-dependen	97.64
PLN02383	344	aspartate semialdehyde dehydrogenase	97.62
PRK08057	248	cobalt-precorrin-6x reductase; Reviewed	97.61
PRK08664	349	aspartate-semialdehyde dehydrogenase; Reviewed	97.6
PRK05442	326	malate dehydrogenase; Provisional	97.59
PLN00112	444	malate dehydrogenase (NADP); Provisional	97.55
PRK04148	134	hypothetical protein; Provisional	97.53
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	97.5
PRK09496	453	trkA potassium transporter peripheral membrane com	97.45
COG4982	866	3-oxoacyl-[acyl-carrier protein]	97.44
PRK11863	313	N-acetyl-gamma-glutamyl-phosphate reductase; Provi	97.39
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	97.34
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	97.34
COG0039	313	Mdh Malate/lactate dehydrogenases [Energy producti	97.33
PRK06129	308	3-hydroxyacyl-CoA dehydrogenase; Validated	97.32
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	97.28
PTZ00082	321	L-lactate dehydrogenase; Provisional	97.27
PTZ00117	319	malate dehydrogenase; Provisional	97.27
KOG1494	345	consensus NAD-dependent malate dehydrogenase [Ener	97.25
PRK08040	336	putative semialdehyde dehydrogenase; Provisional	97.23
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	97.22
COG0002	349	ArgC Acetylglutamate semialdehyde dehydrogenase [A	97.21
cd05290	307	LDH_3 A subgroup of L-lactate dehydrogenases. L-la	97.19
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	97.17
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	97.14
PRK06598	369	aspartate-semialdehyde dehydrogenase; Reviewed	97.09
PRK06019	372	phosphoribosylaminoimidazole carboxylase ATPase su	97.07
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	97.07
PRK06223	307	malate dehydrogenase; Reviewed	97.07
PRK11199	374	tyrA bifunctional chorismate mutase/prephenate deh	97.05
PRK03659	601	glutathione-regulated potassium-efflux system prot	97.04
TIGR01851	310	argC_other N-acetyl-gamma-glutamyl-phosphate reduc	97.04
TIGR00978	341	asd_EA aspartate-semialdehyde dehydrogenase (non-p	97.04
PF02571	249	CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro:	97.03
PF08732	410	HIM1: HIM1; InterPro: IPR014843 HIM1 (high inducti	97.03
PRK10669	558	putative cation:proton antiport protein; Provision	97.02
COG0289	266	DapB Dihydrodipicolinate reductase [Amino acid tra	97.01
COG1004	414	Ugd Predicted UDP-glucose 6-dehydrogenase [Cell en	97.01
COG2085	211	Predicted dinucleotide-binding enzymes [General fu	97.01
cd05292	308	LDH_2 A subgroup of L-lactate dehydrogenases. L-la	97.0
cd05293	312	LDH_1 A subgroup of L-lactate dehydrogenases. L-la	96.99
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	96.94
PRK08655	437	prephenate dehydrogenase; Provisional	96.93
TIGR01763	305	MalateDH_bact malate dehydrogenase, NAD-dependent.	96.9
PRK06728	347	aspartate-semialdehyde dehydrogenase; Provisional	96.86
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	96.85
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	96.81
PF03721	185	UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogen	96.8
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	96.8
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	96.79
COG0026	375	PurK Phosphoribosylaminoimidazole carboxylase (NCA	96.79
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	96.78
PF13380	116	CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5	96.77
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	96.76
PRK14619	308	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	96.74
PLN02602	350	lactate dehydrogenase	96.74
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	96.72
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.72
cd01485	198	E1-1_like Ubiquitin activating enzyme (E1), repeat	96.7
KOG4022	236	consensus Dihydropteridine reductase DHPR/QDPR [Am	96.68
PRK03562	621	glutathione-regulated potassium-efflux system prot	96.68
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	96.67
PLN02353	473	probable UDP-glucose 6-dehydrogenase	96.67
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	96.67
PRK08306	296	dipicolinate synthase subunit A; Reviewed	96.66
KOG0172	445	consensus Lysine-ketoglutarate reductase/saccharop	96.66
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	96.65
COG0136	334	Asd Aspartate-semialdehyde dehydrogenase [Amino ac	96.65
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	96.65
cd05295	452	MDH_like Malate dehydrogenase-like. These MDH-like	96.64
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	96.63
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.62
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	96.6
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.57
PRK08223	287	hypothetical protein; Validated	96.57
PRK10537	393	voltage-gated potassium channel; Provisional	96.57
PRK11064	415	wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Pro	96.57
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	96.56
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.53
TIGR02717	447	AcCoA-syn-alpha acetyl coenzyme A synthetase (ADP	96.53
PRK11880	267	pyrroline-5-carboxylate reductase; Reviewed	96.5
PRK09288	395	purT phosphoribosylglycinamide formyltransferase 2	96.5
PLN02256	304	arogenate dehydrogenase	96.5
PRK08328	231	hypothetical protein; Provisional	96.5
TIGR01745	366	asd_gamma aspartate-semialdehyde dehydrogenase, ga	96.49
COG2099	257	CobK Precorrin-6x reductase [Coenzyme metabolism]	96.49
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	96.49
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	96.48
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	96.48
cd00300	300	LDH_like L-lactate dehydrogenase-like enzymes. Mem	96.47
TIGR03026	411	NDP-sugDHase nucleotide sugar dehydrogenase. All o	96.47
PRK13982	475	bifunctional SbtC-like/phosphopantothenoylcysteine	96.46
TIGR01757	387	Malate-DH_plant malate dehydrogenase, NADP-depende	96.46
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	96.45
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	96.44
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	96.44
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	96.43
PRK06719	157	precorrin-2 dehydrogenase; Validated	96.42
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	96.41
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	96.4
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	96.34
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	96.33
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	96.32
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	96.31
smart00859	122	Semialdhyde_dh Semialdehyde dehydrogenase, NAD bin	96.31
PRK07066	321	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.3
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	96.29
PRK00094	325	gpsA NAD(P)H-dependent glycerol-3-phosphate dehydr	96.27
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	96.27
PRK07531	495	bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioe	96.24
PRK06444	197	prephenate dehydrogenase; Provisional	96.24
PRK08410	311	2-hydroxyacid dehydrogenase; Provisional	96.23
TIGR00036	266	dapB dihydrodipicolinate reductase.	96.23
PF01210	157	NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate	96.23
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	96.21
cd01489	312	Uba2_SUMO Ubiquitin activating enzyme (E1) subunit	96.21
PRK14188	296	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.19
PF02882	160	THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl	96.19
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	96.19
PLN02928	347	oxidoreductase family protein	96.19
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	96.19
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	96.17
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	96.16
COG2084	286	MmsB 3-hydroxyisobutyrate dehydrogenase and relate	96.15
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	96.15
cd01484	234	E1-2_like Ubiquitin activating enzyme (E1), repeat	96.13
TIGR01142	380	purT phosphoribosylglycinamide formyltransferase 2	96.12
PRK04308	445	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.12
PRK15116	268	sulfur acceptor protein CsdL; Provisional	96.1
PRK13940	414	glutamyl-tRNA reductase; Provisional	96.1
PRK11559	296	garR tartronate semialdehyde reductase; Provisiona	96.09
COG0111	324	SerA Phosphoglycerate dehydrogenase and related de	96.09
PRK06487	317	glycerate dehydrogenase; Provisional	96.07
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	96.05
PRK04207	341	glyceraldehyde-3-phosphate dehydrogenase; Provisio	96.04
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	96.04
PLN02948	577	phosphoribosylaminoimidazole carboxylase	96.03
PRK07878	392	molybdopterin biosynthesis-like protein MoeZ; Vali	96.02
cd01339	300	LDH-like_MDH L-lactate dehydrogenase-like malate d	95.98
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	95.95
PRK06849	389	hypothetical protein; Provisional	95.93
TIGR01161	352	purK phosphoribosylaminoimidazole carboxylase, Pur	95.93
TIGR01771	299	L-LDH-NAD L-lactate dehydrogenase. This model repr	95.92
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	95.89
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	95.89
PRK06901	322	aspartate-semialdehyde dehydrogenase; Provisional	95.88
PRK07877	722	hypothetical protein; Provisional	95.88
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	95.87
PRK08293	287	3-hydroxybutyryl-CoA dehydrogenase; Validated	95.86
PRK07574	385	formate dehydrogenase; Provisional	95.86
PRK14851	679	hypothetical protein; Provisional	95.81
PRK05479	330	ketol-acid reductoisomerase; Provisional	95.78
PRK07502	307	cyclohexadienyl dehydrogenase; Validated	95.78
PRK02705	459	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.78
PRK09260	288	3-hydroxybutyryl-CoA dehydrogenase; Validated	95.77
PTZ00075	476	Adenosylhomocysteinase; Provisional	95.76
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	95.75
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	95.75
PRK15461	296	NADH-dependent gamma-hydroxybutyrate dehydrogenase	95.73
PRK00141	473	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.72

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=100.00  E-value=2.2e-34  Score=241.02  Aligned_cols=215  Identities=24%  Similarity=0.287  Sum_probs=169.7

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc-------cccCCceeEEeccCCCHhHHHHHhcCCCEEEE
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-------DSWANNVIWHQGNLLSSDSWKEALDGVTAVIS  127 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~  127 (286)
                      ++++|+||||+||||+++++.||++||.|++++|++++...       +...++++++.+|+.|++++.++++|||+|||
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~gcdgVfH   84 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAIDGCDGVFH   84 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHhCCCEEEE
Confidence            46799999999999999999999999999999999877321       11245799999999999999999999999999


Q ss_pred             ccccCCCc-----chhhhhhhHHHHHHHHHHHHcC-CCEEEEEecCC--cCC-CCc-------------------cccch
Q 023205          128 CVGGFGSN-----SYMYKINGTANINAIRAASEKG-VKRFVYISAAD--FGV-ANY-------------------LLQGY  179 (286)
Q Consensus       128 ~a~~~~~~-----~~~~~~~~~~~~~l~~~a~~~~-v~~~v~~Ss~~--~~~-~~~-------------------~~~~y  179 (286)
                      +|.++.+.     .+..++.+.|+.|++++|++.. ||||||+||..  ... ...                   ....|
T Consensus        85 ~Asp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TSS~aAv~~~~~~~~~~~vvdE~~wsd~~~~~~~~~~Y  164 (327)
T KOG1502|consen   85 TASPVDFDLEDPEKELIDPAVKGTKNVLEACKKTKSVKRVVYTSSTAAVRYNGPNIGENSVVDEESWSDLDFCRCKKLWY  164 (327)
T ss_pred             eCccCCCCCCCcHHhhhhHHHHHHHHHHHHHhccCCcceEEEeccHHHhccCCcCCCCCcccccccCCcHHHHHhhHHHH
Confidence            99998642     2678999999999999999988 99999999942  111 000                   13579


Q ss_pred             HHHHHHHHHHHHH---hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHH
Q 023205          180 YEGKRAAETELLT---RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVA  256 (286)
Q Consensus       180 ~~sK~~~E~~~~~---~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva  256 (286)
                      ..+|..+|+..|+   ..|++.+++.|+.|+||...+..       ......+...+...  .....+....+||++|||
T Consensus       165 ~~sK~lAEkaAw~fa~e~~~~lv~inP~lV~GP~l~~~l-------~~s~~~~l~~i~G~--~~~~~n~~~~~VdVrDVA  235 (327)
T KOG1502|consen  165 ALSKTLAEKAAWEFAKENGLDLVTINPGLVFGPGLQPSL-------NSSLNALLKLIKGL--AETYPNFWLAFVDVRDVA  235 (327)
T ss_pred             HHHHHHHHHHHHHHHHhCCccEEEecCCceECCCccccc-------chhHHHHHHHHhcc--cccCCCCceeeEeHHHHH
Confidence            9999999999986   57899999999999999886532       22334444444432  222224455599999999


Q ss_pred             HHHHHHhcCCCCCCCeeEecccc
Q 023205          257 KVAVRAATDPVFPPGIVDVHGIL  279 (286)
Q Consensus       257 ~~~~~~l~~~~~~~~~~~l~~~~  279 (286)
                      .+++.+++++... +.|.+.+..
T Consensus       236 ~AHv~a~E~~~a~-GRyic~~~~  257 (327)
T KOG1502|consen  236 LAHVLALEKPSAK-GRYICVGEV  257 (327)
T ss_pred             HHHHHHHcCcccC-ceEEEecCc
Confidence            9999999999984 566666544

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=100.00  E-value=1.5e-34  Score=244.77  Aligned_cols=212  Identities=30%  Similarity=0.322  Sum_probs=164.5

Q ss_pred             EEEcCCChhHHHHHHHHHHCC--CeEEEEecCCCcccc-ccc-CCceeEEeccCCCHhHHHHHhcCCCEEEEccccCCC-
Q 023205           60 LVLGGNGFVGSHICREALDRG--LTVASLSRSGRSSLR-DSW-ANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFGS-  134 (286)
Q Consensus        60 lVtGatG~iG~~l~~~Ll~~g--~~V~~l~R~~~~~~~-~~~-~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~~~~-  134 (286)
                      |||||+||+|++|+++|+++|  ++|++++|.+..... ... ....+++++|++|++++.++++++|+|||+|++... 
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~a~~g~d~V~H~Aa~~~~~   80 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFLKDLQKSGVKEYIQGDITDPESLEEALEGVDVVFHTAAPVPPW   80 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccchhhhcccceeEEEeccccHHHHHHHhcCCceEEEeCcccccc
Confidence            699999999999999999999  799999998765331 111 223449999999999999999999999999987632 


Q ss_pred             ----cchhhhhhhHHHHHHHHHHHHcCCCEEEEEecCC-cCC---C-------------CccccchHHHHHHHHHHHHHh
Q 023205          135 ----NSYMYKINGTANINAIRAASEKGVKRFVYISAAD-FGV---A-------------NYLLQGYYEGKRAAETELLTR  193 (286)
Q Consensus       135 ----~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~~-~~~---~-------------~~~~~~y~~sK~~~E~~~~~~  193 (286)
                          ....+++|+.|+.|++++|++.++++|||+||.. ++.   .             ..+.+.|+.||..+|+++++.
T Consensus        81 ~~~~~~~~~~vNV~GT~nvl~aa~~~~VkrlVytSS~~vv~~~~~~~~~~~~dE~~~~~~~~~~~Y~~SK~~AE~~V~~a  160 (280)
T PF01073_consen   81 GDYPPEEYYKVNVDGTRNVLEAARKAGVKRLVYTSSISVVFDNYKGDPIINGDEDTPYPSSPLDPYAESKALAEKAVLEA  160 (280)
T ss_pred             CcccHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcCcceeEeccCCCCcccCCcCCcccccccCchHHHHHHHHHHHHhh
Confidence                3457899999999999999999999999999952 221   0             013568999999999999885


Q ss_pred             CC--------CcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCC--CCCCccCCCccHHHHHHHHHHHh
Q 023205          194 YP--------YGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLP--LVGPLFTPPVNVTVVAKVAVRAA  263 (286)
Q Consensus       194 ~g--------~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~~~~~~i~v~Dva~~~~~~l  263 (286)
                      .+        +.+++|||+.||||+....           ...+....+......  ..++...++++++|+|.+++.++
T Consensus       161 ~~~~~~~g~~l~t~~lRP~~IyGp~d~~~-----------~~~~~~~~~~g~~~~~~g~~~~~~~~vyV~NvA~ahvlA~  229 (280)
T PF01073_consen  161 NGSELKNGGRLRTCALRPAGIYGPGDQRL-----------VPRLVKMVRSGLFLFQIGDGNNLFDFVYVENVAHAHVLAA  229 (280)
T ss_pred             cccccccccceeEEEEeccEEeCcccccc-----------cchhhHHHHhcccceeecCCCceECcEeHHHHHHHHHHHH
Confidence            44        8999999999999986432           222333333332222  22344789999999999998876


Q ss_pred             c---C----CCCCCCeeEeccccccc
Q 023205          264 T---D----PVFPPGIVDVHGILRYS  282 (286)
Q Consensus       264 ~---~----~~~~~~~~~l~~~~~~s  282 (286)
                      +   +    +...|+.|+|++.+++.
T Consensus       230 ~~L~~~~~~~~~~G~~y~itd~~p~~  255 (280)
T PF01073_consen  230 QALLEPGKPERVAGQAYFITDGEPVP  255 (280)
T ss_pred             HHhccccccccCCCcEEEEECCCccC
Confidence            4   2    34568999999998876

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=3.4e-34  Score=233.84  Aligned_cols=227  Identities=22%  Similarity=0.252  Sum_probs=177.4

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhc--CCCEEEEccccC--
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD--GVTAVISCVGGF--  132 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~--~~d~vi~~a~~~--  132 (286)
                      |+||||||+||||+|.+.+|++.|++|++++.-............++|+++|+.|.+.++++|+  .+|+|||+|+..  
T Consensus         1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~~~~f~~gDi~D~~~L~~vf~~~~idaViHFAa~~~V   80 (329)
T COG1087           1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKLQFKFYEGDLLDRALLTAVFEENKIDAVVHFAASISV   80 (329)
T ss_pred             CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhccCceEEeccccHHHHHHHHHhcCCCEEEECcccccc
Confidence            5899999999999999999999999999999765442222111127999999999999999997  589999999864  


Q ss_pred             ----CCcchhhhhhhHHHHHHHHHHHHcCCCEEEEEec-CCcCCCC----------ccccchHHHHHHHHHHHHH---hC
Q 023205          133 ----GSNSYMYKINGTANINAIRAASEKGVKRFVYISA-ADFGVAN----------YLLQGYYEGKRAAETELLT---RY  194 (286)
Q Consensus       133 ----~~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss-~~~~~~~----------~~~~~y~~sK~~~E~~~~~---~~  194 (286)
                          ..+...++-|+.|+.+|++++++.++++|||.|| ++||.+.          .|.++||+||...|+++..   ..
T Consensus        81 gESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv~~~vFSStAavYG~p~~~PI~E~~~~~p~NPYG~sKlm~E~iL~d~~~a~  160 (329)
T COG1087          81 GESVQNPLKYYDNNVVGTLNLIEAMLQTGVKKFIFSSTAAVYGEPTTSPISETSPLAPINPYGRSKLMSEEILRDAAKAN  160 (329)
T ss_pred             chhhhCHHHHHhhchHhHHHHHHHHHHhCCCEEEEecchhhcCCCCCcccCCCCCCCCCCcchhHHHHHHHHHHHHHHhC
Confidence                3566888999999999999999999999999999 4787654          3678999999999999875   67


Q ss_pred             CCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCC-CCCCC--------CCccCCCccHHHHHHHHHHHhcC
Q 023205          195 PYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLS-QLPLV--------GPLFTPPVNVTVVAKVAVRAATD  265 (286)
Q Consensus       195 g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--------g~~~~~~i~v~Dva~~~~~~l~~  265 (286)
                      +++++++|-.++.|....+..-.........+..+.+...... .+.++        |...+|+|||.|+|++++.+++.
T Consensus       161 ~~~~v~LRYFN~aGA~~~G~iGe~~~~~thLip~~~q~A~G~r~~l~ifG~DY~T~DGT~iRDYIHV~DLA~aH~~Al~~  240 (329)
T COG1087         161 PFKVVILRYFNVAGACPDGTLGQRYPGATLLIPVAAEAALGKRDKLFIFGDDYDTKDGTCIRDYIHVDDLADAHVLALKY  240 (329)
T ss_pred             CCcEEEEEecccccCCCCCccCCCCCCcchHHHHHHHHHhcCCceeEEeCCCCCCCCCCeeeeeeehhHHHHHHHHHHHH
Confidence            8999999999999987765543333333445555555443332 23333        44478999999999999999864


Q ss_pred             CCCCC--CeeEecccccccc
Q 023205          266 PVFPP--GIVDVHGILRYSQ  283 (286)
Q Consensus       266 ~~~~~--~~~~l~~~~~~s~  283 (286)
                      -...+  .+||++.+..+|-
T Consensus       241 L~~~g~~~~~NLG~G~G~SV  260 (329)
T COG1087         241 LKEGGSNNIFNLGSGNGFSV  260 (329)
T ss_pred             HHhCCceeEEEccCCCceeH
Confidence            22222  5999999887763

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=100.00  E-value=5.4e-34  Score=249.86  Aligned_cols=224  Identities=18%  Similarity=0.138  Sum_probs=173.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc----------cccCCceeEEeccCCCHhHHHHHhcCCCEE
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR----------DSWANNVIWHQGNLLSSDSWKEALDGVTAV  125 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~----------~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~v  125 (286)
                      +|+|||||||||||++|+++|+++|++|++++|.......          .....+++++.+|+.|.+.+..+++++|+|
T Consensus        15 ~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~~~d~V   94 (348)
T PRK15181         15 PKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACKNVDYV   94 (348)
T ss_pred             CCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhhCCCEE
Confidence            5799999999999999999999999999999986532110          011236889999999999999999999999


Q ss_pred             EEccccCC------CcchhhhhhhHHHHHHHHHHHHcCCCEEEEEecC-CcCCCC----------ccccchHHHHHHHHH
Q 023205          126 ISCVGGFG------SNSYMYKINGTANINAIRAASEKGVKRFVYISAA-DFGVAN----------YLLQGYYEGKRAAET  188 (286)
Q Consensus       126 i~~a~~~~------~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~-~~~~~~----------~~~~~y~~sK~~~E~  188 (286)
                      ||+|+...      ++...+++|+.++.+++++|++.++++|||+||. +|+...          .|.+.|+.+|..+|.
T Consensus        95 iHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~p~~~Y~~sK~~~e~  174 (348)
T PRK15181         95 LHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNEL  174 (348)
T ss_pred             EECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeechHhhCCCCCCCCCCCCCCCCCChhhHHHHHHHH
Confidence            99998643      2345678999999999999999999999999984 566321          255789999999999


Q ss_pred             HHHH---hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCC--CccCCCccHHHHHHHHHHHh
Q 023205          189 ELLT---RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVG--PLFTPPVNVTVVAKVAVRAA  263 (286)
Q Consensus       189 ~~~~---~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--~~~~~~i~v~Dva~~~~~~l  263 (286)
                      ++..   ..+++++++||+.+|||...+..     ....++..+.......+++.+.|  ...++|+|++|+|++++.++
T Consensus       175 ~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~-----~~~~~i~~~~~~~~~~~~i~~~g~g~~~rd~i~v~D~a~a~~~~~  249 (348)
T PRK15181        175 YADVFARSYEFNAIGLRYFNVFGRRQNPNG-----AYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSA  249 (348)
T ss_pred             HHHHHHHHhCCCEEEEEecceeCcCCCCCC-----ccccCHHHHHHHHHcCCCcEEeCCCCceEeeEEHHHHHHHHHHHH
Confidence            7753   46899999999999999764221     01123444444444445566554  44789999999999999877


Q ss_pred             cCCC--CCCCeeEeccccccccc
Q 023205          264 TDPV--FPPGIVDVHGILRYSQK  284 (286)
Q Consensus       264 ~~~~--~~~~~~~l~~~~~~s~~  284 (286)
                      ..+.  ..+++||+++++.+|++
T Consensus       250 ~~~~~~~~~~~yni~~g~~~s~~  272 (348)
T PRK15181        250 TTNDLASKNKVYNVAVGDRTSLN  272 (348)
T ss_pred             hcccccCCCCEEEecCCCcEeHH
Confidence            6432  34789999999888765

>PLN02427 UDP-apiose/xylose synthase

Probab=100.00  E-value=6.4e-33  Score=246.50  Aligned_cols=230  Identities=16%  Similarity=0.147  Sum_probs=170.7

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHC-CCeEEEEecCCCccccc------ccCCceeEEeccCCCHhHHHHHhcCCCEEE
Q 023205           54 PPSEKLLVLGGNGFVGSHICREALDR-GLTVASLSRSGRSSLRD------SWANNVIWHQGNLLSSDSWKEALDGVTAVI  126 (286)
Q Consensus        54 ~~~~~VlVtGatG~iG~~l~~~Ll~~-g~~V~~l~R~~~~~~~~------~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi  126 (286)
                      ..+|+|||||||||||++|+++|+++ |++|++++|+..+....      .+..+++++.+|+.|.+.+.++++++|+||
T Consensus        12 ~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~d~Vi   91 (386)
T PLN02427         12 IKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIKMADLTI   91 (386)
T ss_pred             ccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHHHhhcCCEEE
Confidence            34678999999999999999999998 59999999875432110      122479999999999999999999999999


Q ss_pred             EccccCCC------cchhhhhhhHHHHHHHHHHHHcCCCEEEEEecC-CcCCCC--------------------------
Q 023205          127 SCVGGFGS------NSYMYKINGTANINAIRAASEKGVKRFVYISAA-DFGVAN--------------------------  173 (286)
Q Consensus       127 ~~a~~~~~------~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~-~~~~~~--------------------------  173 (286)
                      |+|+....      +...+..|+.++.+++++|++.+ ++|||+||. +||...                          
T Consensus        92 HlAa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~~-~r~v~~SS~~vYg~~~~~~~~e~~p~~~~~~~~~~~e~~~~~  170 (386)
T PLN02427         92 NLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDHPLRQDPAFYVLKEDESPC  170 (386)
T ss_pred             EcccccChhhhhhChHHHHHHHHHHHHHHHHHHHhcC-CEEEEEeeeeeeCCCcCCCCCccccccccccccccccccccc
Confidence            99986421      22455689999999999998887 899999994 455310                          


Q ss_pred             ------ccccchHHHHHHHHHHHHH---hCCCcEEEEeeCeeecCCCCCc--cccCccccCchHHHHHHhcccCCCCCCC
Q 023205          174 ------YLLQGYYEGKRAAETELLT---RYPYGGVILRPGFIYGTRTVGG--MKLPLGVIGSPMEMVLQHAKPLSQLPLV  242 (286)
Q Consensus       174 ------~~~~~y~~sK~~~E~~~~~---~~g~~~~ilRp~~v~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (286)
                            .+.+.|+.+|..+|++++.   ..+++++++||+.+|||.....  ...+...+..++..+........++.+.
T Consensus       171 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~  250 (386)
T PLN02427        171 IFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRREPLKLV  250 (386)
T ss_pred             ccCCCCccccchHHHHHHHHHHHHHHHhhcCCceEEecccceeCCCCCccccccccccccchHHHHHHHHHhcCCCeEEE
Confidence                  1124699999999998865   4689999999999999975310  0001111223343343333334455444


Q ss_pred             C--CccCCCccHHHHHHHHHHHhcCCC-CCCCeeEeccc-cccccc
Q 023205          243 G--PLFTPPVNVTVVAKVAVRAATDPV-FPPGIVDVHGI-LRYSQK  284 (286)
Q Consensus       243 g--~~~~~~i~v~Dva~~~~~~l~~~~-~~~~~~~l~~~-~~~s~~  284 (286)
                      +  +..++|||++|+|++++.+++++. ..+++||++++ +.++++
T Consensus       251 g~g~~~r~~i~V~Dva~ai~~al~~~~~~~g~~yni~~~~~~~s~~  296 (386)
T PLN02427        251 DGGQSQRTFVYIKDAIEAVLLMIENPARANGHIFNVGNPNNEVTVR  296 (386)
T ss_pred             CCCCceECcEeHHHHHHHHHHHHhCcccccCceEEeCCCCCCccHH
Confidence            4  446899999999999999998764 45789999997 577764

>CHL00194 ycf39 Ycf39; Provisional

Probab=100.00  E-value=7.4e-33  Score=239.76  Aligned_cols=210  Identities=20%  Similarity=0.202  Sum_probs=165.2

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccccCC-Cc
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFG-SN  135 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~~~-~~  135 (286)
                      |+|+|||||||+|++++++|+++|++|++++|+.++. ......+++++++|+.|++++.++++++|+|||+++... +.
T Consensus         1 MkIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~-~~l~~~~v~~v~~Dl~d~~~l~~al~g~d~Vi~~~~~~~~~~   79 (317)
T CHL00194          1 MSLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKA-SFLKEWGAELVYGDLSLPETLPPSFKGVTAIIDASTSRPSDL   79 (317)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHh-hhHhhcCCEEEECCCCCHHHHHHHHCCCCEEEECCCCCCCCc
Confidence            4899999999999999999999999999999986542 111234799999999999999999999999999987543 33


Q ss_pred             chhhhhhhHHHHHHHHHHHHcCCCEEEEEecCCcCCCCccccchHHHHHHHHHHHHHhCCCcEEEEeeCeeecCCCCCcc
Q 023205          136 SYMYKINGTANINAIRAASEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLTRYPYGGVILRPGFIYGTRTVGGM  215 (286)
Q Consensus       136 ~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~~~~g~~~~ilRp~~v~g~~~~~~~  215 (286)
                      ...+++|+.++.+++++|++++++|||++||..  ....+..+|..+|..+|+++.+ .+++++++||+.+|+....   
T Consensus        80 ~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~~--~~~~~~~~~~~~K~~~e~~l~~-~~l~~tilRp~~~~~~~~~---  153 (317)
T CHL00194         80 YNAKQIDWDGKLALIEAAKAAKIKRFIFFSILN--AEQYPYIPLMKLKSDIEQKLKK-SGIPYTIFRLAGFFQGLIS---  153 (317)
T ss_pred             cchhhhhHHHHHHHHHHHHHcCCCEEEEecccc--ccccCCChHHHHHHHHHHHHHH-cCCCeEEEeecHHhhhhhh---
Confidence            456788999999999999999999999999942  2233456799999999998765 8999999999988753210   


Q ss_pred             ccCccccCchHHHHHHhcccCCCCC-CCCCccCCCccHHHHHHHHHHHhcCCCCCCCeeEecccccccccC
Q 023205          216 KLPLGVIGSPMEMVLQHAKPLSQLP-LVGPLFTPPVNVTVVAKVAVRAATDPVFPPGIVDVHGILRYSQKS  285 (286)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~l~~~~~~s~~~  285 (286)
                                 ........ ..++. ..++..+++|+++|+|++++.+++.+...+++||+++++.+|+++
T Consensus       154 -----------~~~~~~~~-~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~ni~g~~~~s~~e  212 (317)
T CHL00194        154 -----------QYAIPILE-KQPIWITNESTPISYIDTQDAAKFCLKSLSLPETKNKTFPLVGPKSWNSSE  212 (317)
T ss_pred             -----------hhhhhhcc-CCceEecCCCCccCccCHHHHHHHHHHHhcCccccCcEEEecCCCccCHHH
Confidence                       00011111 11222 224457899999999999999998877678999999999988753

>PLN02214 cinnamoyl-CoA reductase

Probab=100.00  E-value=5.3e-32  Score=236.62  Aligned_cols=219  Identities=22%  Similarity=0.213  Sum_probs=168.2

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc----cc--cCCceeEEeccCCCHhHHHHHhcCCCEEEEc
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR----DS--WANNVIWHQGNLLSSDSWKEALDGVTAVISC  128 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~----~~--~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~  128 (286)
                      ++++|+||||+||||++++++|+++|++|++++|+.+....    ..  ...+++++.+|++|.+.+.++++++|+|||+
T Consensus         9 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~   88 (342)
T PLN02214          9 AGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAAIDGCDGVFHT   88 (342)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHHhcCCEEEEe
Confidence            46789999999999999999999999999999998653211    11  1236889999999999999999999999999


Q ss_pred             cccCC-CcchhhhhhhHHHHHHHHHHHHcCCCEEEEEecC--CcCCCC-------------------ccccchHHHHHHH
Q 023205          129 VGGFG-SNSYMYKINGTANINAIRAASEKGVKRFVYISAA--DFGVAN-------------------YLLQGYYEGKRAA  186 (286)
Q Consensus       129 a~~~~-~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~--~~~~~~-------------------~~~~~y~~sK~~~  186 (286)
                      |++.. .+...+++|+.++.+++++|++.++++|||+||.  .|+...                   .+.+.|+.+|..+
T Consensus        89 A~~~~~~~~~~~~~nv~gt~~ll~aa~~~~v~r~V~~SS~~avyg~~~~~~~~~~~E~~~~~~~~~~~p~~~Y~~sK~~a  168 (342)
T PLN02214         89 ASPVTDDPEQMVEPAVNGAKFVINAAAEAKVKRVVITSSIGAVYMDPNRDPEAVVDESCWSDLDFCKNTKNWYCYGKMVA  168 (342)
T ss_pred             cCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeccceeeeccCCCCCCcccCcccCCChhhccccccHHHHHHHHH
Confidence            99864 3456788999999999999999999999999994  454211                   0345799999999


Q ss_pred             HHHHHH---hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHh
Q 023205          187 ETELLT---RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAA  263 (286)
Q Consensus       187 E~~~~~---~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l  263 (286)
                      |++++.   ..|++++++||+.+|||......       ......+.....  +..+..++..++|||++|+|++++.++
T Consensus       169 E~~~~~~~~~~g~~~v~lRp~~vyGp~~~~~~-------~~~~~~~~~~~~--g~~~~~~~~~~~~i~V~Dva~a~~~al  239 (342)
T PLN02214        169 EQAAWETAKEKGVDLVVLNPVLVLGPPLQPTI-------NASLYHVLKYLT--GSAKTYANLTQAYVDVRDVALAHVLVY  239 (342)
T ss_pred             HHHHHHHHHHcCCcEEEEeCCceECCCCCCCC-------CchHHHHHHHHc--CCcccCCCCCcCeeEHHHHHHHHHHHH
Confidence            998875   46999999999999999754321       111222222222  112233566789999999999999999


Q ss_pred             cCCCCCCCeeEeccccccccc
Q 023205          264 TDPVFPPGIVDVHGILRYSQK  284 (286)
Q Consensus       264 ~~~~~~~~~~~l~~~~~~s~~  284 (286)
                      +++.. ++.||+++ ..++++
T Consensus       240 ~~~~~-~g~yn~~~-~~~~~~  258 (342)
T PLN02214        240 EAPSA-SGRYLLAE-SARHRG  258 (342)
T ss_pred             hCccc-CCcEEEec-CCCCHH
Confidence            87654 56899976 455553

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=100.00  E-value=4.3e-32  Score=237.97  Aligned_cols=227  Identities=15%  Similarity=0.167  Sum_probs=169.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHC-CCeEEEEecCCCcccccccCCceeEEeccCC-CHhHHHHHhcCCCEEEEccccCC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDR-GLTVASLSRSGRSSLRDSWANNVIWHQGNLL-SSDSWKEALDGVTAVISCVGGFG  133 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~-g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~-d~~~~~~~~~~~d~vi~~a~~~~  133 (286)
                      ||+|||||||||||++|+++|++. |++|++++|+...........+++++.+|+. +.+.+.++++++|+|||+|+...
T Consensus         1 m~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~d~ViH~aa~~~   80 (347)
T PRK11908          1 MKKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGDLVNHPRMHFFEGDITINKEWIEYHVKKCDVILPLVAIAT   80 (347)
T ss_pred             CcEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHhccCCCeEEEeCCCCCCHHHHHHHHcCCCEEEECcccCC
Confidence            468999999999999999999986 6999999987543211112347999999997 77888889999999999998542


Q ss_pred             ------CcchhhhhhhHHHHHHHHHHHHcCCCEEEEEecC-CcCCC-------C----------ccccchHHHHHHHHHH
Q 023205          134 ------SNSYMYKINGTANINAIRAASEKGVKRFVYISAA-DFGVA-------N----------YLLQGYYEGKRAAETE  189 (286)
Q Consensus       134 ------~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~-~~~~~-------~----------~~~~~y~~sK~~~E~~  189 (286)
                            ++...+++|+.++.+++++|++.+ ++|||+||. +||..       +          .|.+.|+.+|..+|++
T Consensus        81 ~~~~~~~p~~~~~~n~~~~~~ll~aa~~~~-~~~v~~SS~~vyg~~~~~~~~ee~~~~~~~~~~~p~~~Y~~sK~~~e~~  159 (347)
T PRK11908         81 PATYVKQPLRVFELDFEANLPIVRSAVKYG-KHLVFPSTSEVYGMCPDEEFDPEASPLVYGPINKPRWIYACSKQLMDRV  159 (347)
T ss_pred             hHHhhcCcHHHHHHHHHHHHHHHHHHHhcC-CeEEEEecceeeccCCCcCcCccccccccCcCCCccchHHHHHHHHHHH
Confidence                  334567889999999999999988 799999994 45421       1          1234799999999998


Q ss_pred             HHH---hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCC--CCccCCCccHHHHHHHHHHHhc
Q 023205          190 LLT---RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLV--GPLFTPPVNVTVVAKVAVRAAT  264 (286)
Q Consensus       190 ~~~---~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~i~v~Dva~~~~~~l~  264 (286)
                      ++.   ..+++++++||+.+|||...+... +......++..+........++.+.  |+..++|||++|++++++.+++
T Consensus       160 ~~~~~~~~~~~~~ilR~~~v~Gp~~~~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~g~~~r~~i~v~D~a~a~~~~~~  238 (347)
T PRK11908        160 IWAYGMEEGLNFTLFRPFNWIGPGLDSIYT-PKEGSSRVVTQFLGHIVRGEPISLVDGGSQKRAFTDIDDGIDALMKIIE  238 (347)
T ss_pred             HHHHHHHcCCCeEEEeeeeeeCCCccCCCc-cccCCcchHHHHHHHHhCCCceEEecCCceeeccccHHHHHHHHHHHHh
Confidence            875   578999999999999997543111 1101122333444333334444443  4568899999999999999998


Q ss_pred             CCC--CCCCeeEecccc-ccccc
Q 023205          265 DPV--FPPGIVDVHGIL-RYSQK  284 (286)
Q Consensus       265 ~~~--~~~~~~~l~~~~-~~s~~  284 (286)
                      ++.  ..+++||++++. .+|++
T Consensus       239 ~~~~~~~g~~yni~~~~~~~s~~  261 (347)
T PRK11908        239 NKDGVASGKIYNIGNPKNNHSVR  261 (347)
T ss_pred             CccccCCCCeEEeCCCCCCcCHH
Confidence            753  347899999974 67654

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=3.5e-32  Score=221.05  Aligned_cols=216  Identities=19%  Similarity=0.167  Sum_probs=179.8

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCC--CeEEEEecCCCc-----ccccccCCceeEEeccCCCHhHHHHHhc--CCCEEEE
Q 023205           57 EKLLVLGGNGFVGSHICREALDRG--LTVASLSRSGRS-----SLRDSWANNVIWHQGNLLSSDSWKEALD--GVTAVIS  127 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g--~~V~~l~R~~~~-----~~~~~~~~~~~~i~~Dl~d~~~~~~~~~--~~d~vi~  127 (286)
                      |++|||||+||||+..+++++++.  .+|++++.=.-.     .......++..|+++|+.|.+.+.++++  .+|+|+|
T Consensus         1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~~~~~~~fv~~DI~D~~~v~~~~~~~~~D~Vvh   80 (340)
T COG1088           1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVEDSPRYRFVQGDICDRELVDRLFKEYQPDAVVH   80 (340)
T ss_pred             CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhhcCCCceEEeccccCHHHHHHHHHhcCCCeEEE
Confidence            579999999999999999999985  457777763211     1112234699999999999999999998  5899999


Q ss_pred             ccccCC------CcchhhhhhhHHHHHHHHHHHHcCCC-EEEEEec-CCcCCCC------------ccccchHHHHHHHH
Q 023205          128 CVGGFG------SNSYMYKINGTANINAIRAASEKGVK-RFVYISA-ADFGVAN------------YLLQGYYEGKRAAE  187 (286)
Q Consensus       128 ~a~~~~------~~~~~~~~~~~~~~~l~~~a~~~~v~-~~v~~Ss-~~~~~~~------------~~~~~y~~sK~~~E  187 (286)
                      .|+.++      .+..+.+.|+.|+.+|++++++...+ ||+++|+ -+||+..            .|.++|.+||+.+.
T Consensus        81 fAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HISTDEVYG~l~~~~~~FtE~tp~~PsSPYSASKAasD  160 (340)
T COG1088          81 FAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHISTDEVYGDLGLDDDAFTETTPYNPSSPYSASKAASD  160 (340)
T ss_pred             echhccccccccChhhhhhcchHHHHHHHHHHHHhcccceEEEeccccccccccCCCCCcccCCCCCCCCCcchhhhhHH
Confidence            999764      45678899999999999999998764 9999999 5666432            36789999999999


Q ss_pred             HHHHH---hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCc--cCCCccHHHHHHHHHHH
Q 023205          188 TELLT---RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPL--FTPPVNVTVVAKVAVRA  262 (286)
Q Consensus       188 ~~~~~---~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--~~~~i~v~Dva~~~~~~  262 (286)
                      .++++   ..|++++|.|+++-|||.+.+.         .+++.++.......++|+.|++  .++|++++|-++|+..+
T Consensus       161 ~lVray~~TYglp~~ItrcSNNYGPyqfpE---------KlIP~~I~nal~g~~lpvYGdG~~iRDWl~VeDh~~ai~~V  231 (340)
T COG1088         161 LLVRAYVRTYGLPATITRCSNNYGPYQFPE---------KLIPLMIINALLGKPLPVYGDGLQIRDWLYVEDHCRAIDLV  231 (340)
T ss_pred             HHHHHHHHHcCCceEEecCCCCcCCCcCch---------hhhHHHHHHHHcCCCCceecCCcceeeeEEeHhHHHHHHHH
Confidence            98875   7899999999999999998765         3566666667777888888777  78999999999999999


Q ss_pred             hcCCCCCCCeeEeccccccc
Q 023205          263 ATDPVFPPGIVDVHGILRYS  282 (286)
Q Consensus       263 l~~~~~~~~~~~l~~~~~~s  282 (286)
                      +++.+. |++|||+|....+
T Consensus       232 l~kg~~-GE~YNIgg~~E~~  250 (340)
T COG1088         232 LTKGKI-GETYNIGGGNERT  250 (340)
T ss_pred             HhcCcC-CceEEeCCCccch
Confidence            999887 9999999976653

>PLN02572 UDP-sulfoquinovose synthase

Probab=100.00  E-value=2.5e-31  Score=238.82  Aligned_cols=230  Identities=18%  Similarity=0.226  Sum_probs=166.6

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCccc------c----------------cccCCceeEEeccCCC
Q 023205           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSL------R----------------DSWANNVIWHQGNLLS  111 (286)
Q Consensus        54 ~~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~------~----------------~~~~~~~~~i~~Dl~d  111 (286)
                      .++|+||||||+||||++|+++|+++|++|++++|......      .                .....+++++.+|++|
T Consensus        45 ~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~d  124 (442)
T PLN02572         45 SKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYVGDICD  124 (442)
T ss_pred             ccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEECCCCC
Confidence            35789999999999999999999999999999875321100      0                0011368999999999


Q ss_pred             HhHHHHHhcC--CCEEEEccccCCCc---------chhhhhhhHHHHHHHHHHHHcCCC-EEEEEecC-CcCCC------
Q 023205          112 SDSWKEALDG--VTAVISCVGGFGSN---------SYMYKINGTANINAIRAASEKGVK-RFVYISAA-DFGVA------  172 (286)
Q Consensus       112 ~~~~~~~~~~--~d~vi~~a~~~~~~---------~~~~~~~~~~~~~l~~~a~~~~v~-~~v~~Ss~-~~~~~------  172 (286)
                      .+.+.+++++  +|+|||+|+.....         ...++.|+.++.+++++|++.+++ +||++||. +||..      
T Consensus       125 ~~~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~gv~~~~V~~SS~~vYG~~~~~~~E  204 (442)
T PLN02572        125 FEFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFAPDCHLVKLGTMGEYGTPNIDIEE  204 (442)
T ss_pred             HHHHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhCCCccEEEEecceecCCCCCCCcc
Confidence            9999999984  89999999753211         133578999999999999999985 89999994 56632      


Q ss_pred             -----------------CccccchHHHHHHHHHHHHH---hCCCcEEEEeeCeeecCCCCCccccCc--------cccCc
Q 023205          173 -----------------NYLLQGYYEGKRAAETELLT---RYPYGGVILRPGFIYGTRTVGGMKLPL--------GVIGS  224 (286)
Q Consensus       173 -----------------~~~~~~y~~sK~~~E~~~~~---~~g~~~~ilRp~~v~g~~~~~~~~~~~--------~~~~~  224 (286)
                                       ..|.++|+.+|..+|.++..   ..|++++++||+.+|||+.......+.        +....
T Consensus       205 ~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~~gl~~v~lR~~~vyGp~~~~~~~~~~li~~~~~~~~~~~  284 (442)
T PLN02572        205 GYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETMMDEELINRLDYDGVFGT  284 (442)
T ss_pred             cccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHhcCCCEEEEecccccCCCCcccccccccccccCcccchhh
Confidence                             12346899999999998754   569999999999999998643211110        00112


Q ss_pred             hHHHHHHhcccCCCCCCCC--CccCCCccHHHHHHHHHHHhcCCCCCC--CeeEeccccccccc
Q 023205          225 PMEMVLQHAKPLSQLPLVG--PLFTPPVNVTVVAKVAVRAATDPVFPP--GIVDVHGILRYSQK  284 (286)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~g--~~~~~~i~v~Dva~~~~~~l~~~~~~~--~~~~l~~~~~~s~~  284 (286)
                      .+..+........++++.|  +..++|+|++|++++++.+++++...+  .+||+++ +.++..
T Consensus       285 ~i~~~~~~~~~g~~i~v~g~G~~~Rdfi~V~Dva~a~~~al~~~~~~g~~~i~Nigs-~~~si~  347 (442)
T PLN02572        285 ALNRFCVQAAVGHPLTVYGKGGQTRGFLDIRDTVRCIEIAIANPAKPGEFRVFNQFT-EQFSVN  347 (442)
T ss_pred             HHHHHHHHHhcCCCceecCCCCEEECeEEHHHHHHHHHHHHhChhhcCceeEEEeCC-CceeHH
Confidence            3333334433344555544  557899999999999999998653334  5899976 456543

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=100.00  E-value=3.1e-31  Score=233.88  Aligned_cols=223  Identities=18%  Similarity=0.143  Sum_probs=169.0

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccccCC
Q 023205           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFG  133 (286)
Q Consensus        54 ~~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~~~  133 (286)
                      ...|+|||||||||||+++++.|+++|++|++++|........ ....++++.+|+.|.+.+..+++++|+|||+|+...
T Consensus        19 ~~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~Aa~~~   97 (370)
T PLN02695         19 SEKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHMSE-DMFCHEFHLVDLRVMENCLKVTKGVDHVFNLAADMG   97 (370)
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEecccccccc-ccccceEEECCCCCHHHHHHHHhCCCEEEEcccccC
Confidence            3468999999999999999999999999999999975432111 112467899999999999999999999999997642


Q ss_pred             -------CcchhhhhhhHHHHHHHHHHHHcCCCEEEEEecC-CcCCC----------------CccccchHHHHHHHHHH
Q 023205          134 -------SNSYMYKINGTANINAIRAASEKGVKRFVYISAA-DFGVA----------------NYLLQGYYEGKRAAETE  189 (286)
Q Consensus       134 -------~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~-~~~~~----------------~~~~~~y~~sK~~~E~~  189 (286)
                             ++...+..|+.++.+++++|++.++++|||+||. .|+..                ..|.+.|+.+|..+|++
T Consensus        98 ~~~~~~~~~~~~~~~N~~~t~nll~aa~~~~vk~~V~~SS~~vYg~~~~~~~~~~~~E~~~~p~~p~s~Yg~sK~~~E~~  177 (370)
T PLN02695         98 GMGFIQSNHSVIMYNNTMISFNMLEAARINGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLATEEL  177 (370)
T ss_pred             CccccccCchhhHHHHHHHHHHHHHHHHHhCCCEEEEeCchhhcCCccccCcCCCcCcccCCCCCCCCHHHHHHHHHHHH
Confidence                   2234567899999999999999999999999994 45421                12456899999999998


Q ss_pred             HHH---hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHH-HHhcccCCCCCCC--CCccCCCccHHHHHHHHHHHh
Q 023205          190 LLT---RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMV-LQHAKPLSQLPLV--GPLFTPPVNVTVVAKVAVRAA  263 (286)
Q Consensus       190 ~~~---~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~--g~~~~~~i~v~Dva~~~~~~l  263 (286)
                      ++.   ..|++++++||+.+|||......  .   .......+ ........+++++  |+..++|+|++|++++++.++
T Consensus       178 ~~~~~~~~g~~~~ilR~~~vyGp~~~~~~--~---~~~~~~~~~~~~~~~~~~i~~~g~g~~~r~~i~v~D~a~ai~~~~  252 (370)
T PLN02695        178 CKHYTKDFGIECRIGRFHNIYGPFGTWKG--G---REKAPAAFCRKALTSTDEFEMWGDGKQTRSFTFIDECVEGVLRLT  252 (370)
T ss_pred             HHHHHHHhCCCEEEEEECCccCCCCCccc--c---ccccHHHHHHHHHcCCCCeEEeCCCCeEEeEEeHHHHHHHHHHHH
Confidence            754   57999999999999999653110  0   00112222 2222323455544  455889999999999999988


Q ss_pred             cCCCCCCCeeEeccccccccc
Q 023205          264 TDPVFPPGIVDVHGILRYSQK  284 (286)
Q Consensus       264 ~~~~~~~~~~~l~~~~~~s~~  284 (286)
                      +.+.  +++||+++++.+|++
T Consensus       253 ~~~~--~~~~nv~~~~~~s~~  271 (370)
T PLN02695        253 KSDF--REPVNIGSDEMVSMN  271 (370)
T ss_pred             hccC--CCceEecCCCceeHH
Confidence            7643  689999999888875

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=99.98  E-value=6.3e-31  Score=228.31  Aligned_cols=217  Identities=23%  Similarity=0.270  Sum_probs=164.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc--c-----ccCCceeEEeccCCCHhHHHHHhcCCCEEEEc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--D-----SWANNVIWHQGNLLSSDSWKEALDGVTAVISC  128 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~--~-----~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~  128 (286)
                      .++||||||+||||++++++|+++|++|+++.|+..+...  .     ....+++++.+|++|++.+.++++++|+|||+
T Consensus         5 ~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~   84 (322)
T PLN02986          5 GKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIEGCDAVFHT   84 (322)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHhCCCEEEEe
Confidence            5799999999999999999999999999999998654211  0     11247899999999999999999999999999


Q ss_pred             cccCC----Cc-chhhhhhhHHHHHHHHHHHHc-CCCEEEEEecCC---cCCCC-------------------ccccchH
Q 023205          129 VGGFG----SN-SYMYKINGTANINAIRAASEK-GVKRFVYISAAD---FGVAN-------------------YLLQGYY  180 (286)
Q Consensus       129 a~~~~----~~-~~~~~~~~~~~~~l~~~a~~~-~v~~~v~~Ss~~---~~~~~-------------------~~~~~y~  180 (286)
                      |++..    ++ ...+++|+.++.+++++|++. ++++||++||..   ++...                   .+.+.|+
T Consensus        85 A~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~rvV~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y~  164 (322)
T PLN02986         85 ASPVFFTVKDPQTELIDPALKGTINVLNTCKETPSVKRVILTSSTAAVLFRQPPIEANDVVDETFFSDPSLCRETKNWYP  164 (322)
T ss_pred             CCCcCCCCCCchhhhhHHHHHHHHHHHHHHHhcCCccEEEEecchhheecCCccCCCCCCcCcccCCChHHhhccccchH
Confidence            98752    12 245789999999999999885 789999999952   33210                   1236799


Q ss_pred             HHHHHHHHHHHH---hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHH
Q 023205          181 EGKRAAETELLT---RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAK  257 (286)
Q Consensus       181 ~sK~~~E~~~~~---~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~  257 (286)
                      .+|..+|+++++   ..+++++++||+.+|||...+..       ......+....... .  ..++..++||+++|+|+
T Consensus       165 ~sK~~aE~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~-------~~~~~~~~~~~~g~-~--~~~~~~~~~v~v~Dva~  234 (322)
T PLN02986        165 LSKILAENAAWEFAKDNGIDMVVLNPGFICGPLLQPTL-------NFSVELIVDFINGK-N--LFNNRFYRFVDVRDVAL  234 (322)
T ss_pred             HHHHHHHHHHHHHHHHhCCeEEEEcccceeCCCCCCCC-------CccHHHHHHHHcCC-C--CCCCcCcceeEHHHHHH
Confidence            999999998875   47999999999999999754321       11112222222221 1  13455678999999999


Q ss_pred             HHHHHhcCCCCCCCeeEeccccccccc
Q 023205          258 VAVRAATDPVFPPGIVDVHGILRYSQK  284 (286)
Q Consensus       258 ~~~~~l~~~~~~~~~~~l~~~~~~s~~  284 (286)
                      +++.+++++.. ++.||+++ +.++++
T Consensus       235 a~~~al~~~~~-~~~yni~~-~~~s~~  259 (322)
T PLN02986        235 AHIKALETPSA-NGRYIIDG-PIMSVN  259 (322)
T ss_pred             HHHHHhcCccc-CCcEEEec-CCCCHH
Confidence            99999998765 45899965 467765

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=99.98  E-value=1e-30  Score=229.94  Aligned_cols=219  Identities=16%  Similarity=0.151  Sum_probs=165.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCC-Cccc----ccc-cCCceeEEeccCCCHhHHHHHhcC--CCEEEE
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSG-RSSL----RDS-WANNVIWHQGNLLSSDSWKEALDG--VTAVIS  127 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~-~~~~----~~~-~~~~~~~i~~Dl~d~~~~~~~~~~--~d~vi~  127 (286)
                      |++|||||||||||+++++.|+++|++|+++.++. ....    ... ...+++++.+|+.|.+.+.+++++  +|+|||
T Consensus         1 ~~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~Vih   80 (355)
T PRK10217          1 MRKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARVFTEHQPDCVMH   80 (355)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccccchhhhhhcccCCceEEEECCCcChHHHHHHHhhcCCCEEEE
Confidence            46899999999999999999999998765544432 2110    010 123578899999999999999984  899999


Q ss_pred             ccccCC------CcchhhhhhhHHHHHHHHHHHH---------cCCCEEEEEecC-CcCCC------------Cccccch
Q 023205          128 CVGGFG------SNSYMYKINGTANINAIRAASE---------KGVKRFVYISAA-DFGVA------------NYLLQGY  179 (286)
Q Consensus       128 ~a~~~~------~~~~~~~~~~~~~~~l~~~a~~---------~~v~~~v~~Ss~-~~~~~------------~~~~~~y  179 (286)
                      +||...      .....+++|+.++.+++++|.+         .++++||++||. .|+..            ..+.+.|
T Consensus        81 ~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~E~~~~~p~s~Y  160 (355)
T PRK10217         81 LAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPY  160 (355)
T ss_pred             CCcccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCCCCCcCCCCCCCCCChh
Confidence            998753      2345778999999999999976         356799999994 55531            1246789


Q ss_pred             HHHHHHHHHHHHH---hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCC--CCccCCCccHHH
Q 023205          180 YEGKRAAETELLT---RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLV--GPLFTPPVNVTV  254 (286)
Q Consensus       180 ~~sK~~~E~~~~~---~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~i~v~D  254 (286)
                      +.+|..+|.+++.   ..+++++++||+.+|||.....         .++..+........++++.  |+..++|+|++|
T Consensus       161 ~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~---------~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~D  231 (355)
T PRK10217        161 SASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFPE---------KLIPLMILNALAGKPLPVYGNGQQIRDWLYVED  231 (355)
T ss_pred             HHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCcc---------cHHHHHHHHHhcCCCceEeCCCCeeeCcCcHHH
Confidence            9999999998864   5789999999999999975321         1333333333334455544  455899999999


Q ss_pred             HHHHHHHHhcCCCCCCCeeEeccccccccc
Q 023205          255 VAKVAVRAATDPVFPPGIVDVHGILRYSQK  284 (286)
Q Consensus       255 va~~~~~~l~~~~~~~~~~~l~~~~~~s~~  284 (286)
                      ++++++.+++.+. .+++||+++++.+|++
T Consensus       232 ~a~a~~~~~~~~~-~~~~yni~~~~~~s~~  260 (355)
T PRK10217        232 HARALYCVATTGK-VGETYNIGGHNERKNL  260 (355)
T ss_pred             HHHHHHHHHhcCC-CCCeEEeCCCCcccHH
Confidence            9999999998754 4789999999988765

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=99.98  E-value=2.9e-31  Score=220.18  Aligned_cols=212  Identities=28%  Similarity=0.377  Sum_probs=172.1

Q ss_pred             EEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCC--CEEEEccccCC---
Q 023205           59 LLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGV--TAVISCVGGFG---  133 (286)
Q Consensus        59 VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~--d~vi~~a~~~~---  133 (286)
                      |||||||||||++++++|+++|+.|+.+.|+...........+++++.+|+.|.+.+++++++.  |+|||+|+...   
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~~~~~~~~d~vi~~a~~~~~~~   80 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKKLNVEFVIGDLTDKEQLEKLLEKANIDVVIHLAAFSSNPE   80 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHHTTEEEEESETTSHHHHHHHHHHHTESEEEEEBSSSSHHH
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccccceEEEEEeeccccccccccccccCceEEEEeeccccccc
Confidence            7999999999999999999999999999998876433222238999999999999999999876  99999999863   


Q ss_pred             ---CcchhhhhhhHHHHHHHHHHHHcCCCEEEEEecC-CcCCCC----------ccccchHHHHHHHHHHHHH---hCCC
Q 023205          134 ---SNSYMYKINGTANINAIRAASEKGVKRFVYISAA-DFGVAN----------YLLQGYYEGKRAAETELLT---RYPY  196 (286)
Q Consensus       134 ---~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~-~~~~~~----------~~~~~y~~sK~~~E~~~~~---~~g~  196 (286)
                         .....++.|+.++.+++++|++.++++||++||. .|+...          .+.+.|+.+|...|+++++   ..++
T Consensus        81 ~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~sS~~~y~~~~~~~~~e~~~~~~~~~Y~~~K~~~e~~~~~~~~~~~~  160 (236)
T PF01370_consen   81 SFEDPEEIIEANVQGTRNLLEAAREAGVKRFIFLSSASVYGDPDGEPIDEDSPINPLSPYGASKRAAEELLRDYAKKYGL  160 (236)
T ss_dssp             HHHSHHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEEGGGGTSSSSSSBETTSGCCHSSHHHHHHHHHHHHHHHHHHHHTS
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence               3346678899999999999999999999999995 455441          2457799999999998875   4589


Q ss_pred             cEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCC--CCCccCCCccHHHHHHHHHHHhcCCCCCCCeeE
Q 023205          197 GGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPL--VGPLFTPPVNVTVVAKVAVRAATDPVFPPGIVD  274 (286)
Q Consensus       197 ~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~  274 (286)
                      +++++||+.+|||...      ......++..+........++..  .|+..++++|++|+|++++.+++++...+++||
T Consensus       161 ~~~~~R~~~vyG~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~yN  234 (236)
T PF01370_consen  161 RVTILRPPNVYGPGNP------NNNSSSFLPSLIRQALKGKPIKIPGDGSQVRDFIHVDDLAEAIVAALENPKAAGGIYN  234 (236)
T ss_dssp             EEEEEEESEEESTTSS------SSSTSSHHHHHHHHHHTTSSEEEESTSSCEEEEEEHHHHHHHHHHHHHHSCTTTEEEE
T ss_pred             cccccccccccccccc------ccccccccchhhHHhhcCCcccccCCCCCccceEEHHHHHHHHHHHHhCCCCCCCEEE
Confidence            9999999999999811      01113455666666655554544  456689999999999999999999886799999


Q ss_pred             ec
Q 023205          275 VH  276 (286)
Q Consensus       275 l~  276 (286)
                      |+
T Consensus       235 ig  236 (236)
T PF01370_consen  235 IG  236 (236)
T ss_dssp             ES
T ss_pred             eC
Confidence            85

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=99.98  E-value=1e-30  Score=226.94  Aligned_cols=217  Identities=19%  Similarity=0.208  Sum_probs=164.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc--c-----ccCCceeEEeccCCCHhHHHHHhcCCCEEEEc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--D-----SWANNVIWHQGNLLSSDSWKEALDGVTAVISC  128 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~--~-----~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~  128 (286)
                      .++|||||||||||++++++|+++|++|++++|+......  .     ...++++++++|+.|++.+..+++++|+|||+
T Consensus         4 ~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~   83 (322)
T PLN02662          4 GKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVDGCEGVFHT   83 (322)
T ss_pred             CCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHcCCCEEEEe
Confidence            4689999999999999999999999999999998653210  0     11247899999999999999999999999999


Q ss_pred             cccCC----Cc-chhhhhhhHHHHHHHHHHHHc-CCCEEEEEecC---CcCCCC-------------cc------ccchH
Q 023205          129 VGGFG----SN-SYMYKINGTANINAIRAASEK-GVKRFVYISAA---DFGVAN-------------YL------LQGYY  180 (286)
Q Consensus       129 a~~~~----~~-~~~~~~~~~~~~~l~~~a~~~-~v~~~v~~Ss~---~~~~~~-------------~~------~~~y~  180 (286)
                      |++..    .+ ...+++|+.++.+++++|++. ++++|||+||.   .|+...             .+      .+.|+
T Consensus        84 A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~v~~SS~~~~~y~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y~  163 (322)
T PLN02662         84 ASPFYHDVTDPQAELIDPAVKGTLNVLRSCAKVPSVKRVVVTSSMAAVAYNGKPLTPDVVVDETWFSDPAFCEESKLWYV  163 (322)
T ss_pred             CCcccCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEccCHHHhcCCCcCCCCCCcCCcccCCChhHhhcccchHH
Confidence            98753    22 256789999999999999887 89999999994   253210             01      14799


Q ss_pred             HHHHHHHHHHHH---hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHH
Q 023205          181 EGKRAAETELLT---RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAK  257 (286)
Q Consensus       181 ~sK~~~E~~~~~---~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~  257 (286)
                      .+|..+|+++++   ..+++++++||+.+|||......       ......+....... .  ..++..++|||++|+|+
T Consensus       164 ~sK~~~E~~~~~~~~~~~~~~~~lRp~~v~Gp~~~~~~-------~~~~~~~~~~~~~~-~--~~~~~~~~~i~v~Dva~  233 (322)
T PLN02662        164 LSKTLAEEAAWKFAKENGIDMVTINPAMVIGPLLQPTL-------NTSAEAILNLINGA-Q--TFPNASYRWVDVRDVAN  233 (322)
T ss_pred             HHHHHHHHHHHHHHHHcCCcEEEEeCCcccCCCCCCCC-------CchHHHHHHHhcCC-c--cCCCCCcCeEEHHHHHH
Confidence            999999998764   57999999999999999753221       11122233322211 1  22356789999999999


Q ss_pred             HHHHHhcCCCCCCCeeEeccccccccc
Q 023205          258 VAVRAATDPVFPPGIVDVHGILRYSQK  284 (286)
Q Consensus       258 ~~~~~l~~~~~~~~~~~l~~~~~~s~~  284 (286)
                      +++.+++.+.. ++.|++.+ ..++++
T Consensus       234 a~~~~~~~~~~-~~~~~~~g-~~~s~~  258 (322)
T PLN02662        234 AHIQAFEIPSA-SGRYCLVE-RVVHYS  258 (322)
T ss_pred             HHHHHhcCcCc-CCcEEEeC-CCCCHH
Confidence            99999987654 45788875 556654

>PLN00198 anthocyanidin reductase; Provisional

Probab=99.98  E-value=1.7e-30  Score=227.15  Aligned_cols=222  Identities=17%  Similarity=0.202  Sum_probs=161.6

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc-----cc-cCCceeEEeccCCCHhHHHHHhcCCCEEE
Q 023205           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DS-WANNVIWHQGNLLSSDSWKEALDGVTAVI  126 (286)
Q Consensus        53 ~~~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~-----~~-~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi  126 (286)
                      +.++++||||||+||||++|+++|+++|++|+++.|+.+....     .. ..++++++.+|++|.+.+.++++++|+||
T Consensus         6 ~~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi   85 (338)
T PLN00198          6 PTGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRALQELGDLKIFGADLTDEESFEAPIAGCDLVF   85 (338)
T ss_pred             CCCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHhcCCCCceEEEEcCCCChHHHHHHHhcCCEEE
Confidence            3346799999999999999999999999999999998643211     11 11368899999999999999999999999


Q ss_pred             EccccCCCc-----chhhhhhhHHHHHHHHHHHHc-CCCEEEEEecC-CcCCC-----------------------Cccc
Q 023205          127 SCVGGFGSN-----SYMYKINGTANINAIRAASEK-GVKRFVYISAA-DFGVA-----------------------NYLL  176 (286)
Q Consensus       127 ~~a~~~~~~-----~~~~~~~~~~~~~l~~~a~~~-~v~~~v~~Ss~-~~~~~-----------------------~~~~  176 (286)
                      |+|+.....     ...+++|+.++.++++++++. ++++|||+||. +|+..                       ..|.
T Consensus        86 h~A~~~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~~~~g~~~~~~~~~~~~E~~~~~~~~~~~~~~p~  165 (338)
T PLN00198         86 HVATPVNFASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAAAVSINKLSGTGLVMNEKNWTDVEFLTSEKPPT  165 (338)
T ss_pred             EeCCCCccCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeecceeeeccCCCCCCceeccccCCchhhhhhcCCcc
Confidence            999865321     134588999999999999886 58999999994 45421                       1245


Q ss_pred             cchHHHHHHHHHHHHH---hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCC-------Ccc
Q 023205          177 QGYYEGKRAAETELLT---RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVG-------PLF  246 (286)
Q Consensus       177 ~~y~~sK~~~E~~~~~---~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-------~~~  246 (286)
                      ++|+.+|..+|++++.   ..+++++++||+.+|||......       ......+.... ....+...|       ++.
T Consensus       166 ~~Y~~sK~~~E~~~~~~~~~~~~~~~~~R~~~vyGp~~~~~~-------~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~  237 (338)
T PLN00198        166 WGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGPSLTSDI-------PSSLSLAMSLI-TGNEFLINGLKGMQMLSGS  237 (338)
T ss_pred             chhHHHHHHHHHHHHHHHHhcCceEEEEeCCceECCCccCCC-------CCcHHHHHHHH-cCCccccccccccccccCC
Confidence            6799999999998875   46899999999999999864321       11222222211 122222222       234


Q ss_pred             CCCccHHHHHHHHHHHhcCCCCCCCeeEeccccccccc
Q 023205          247 TPPVNVTVVAKVAVRAATDPVFPPGIVDVHGILRYSQK  284 (286)
Q Consensus       247 ~~~i~v~Dva~~~~~~l~~~~~~~~~~~l~~~~~~s~~  284 (286)
                      ++|+|++|++++++.+++.+.. ++.|+.+ +..++++
T Consensus       238 ~~~i~V~D~a~a~~~~~~~~~~-~~~~~~~-~~~~s~~  273 (338)
T PLN00198        238 ISITHVEDVCRAHIFLAEKESA-SGRYICC-AANTSVP  273 (338)
T ss_pred             cceeEHHHHHHHHHHHhhCcCc-CCcEEEe-cCCCCHH
Confidence            6999999999999999987654 4467544 4455543

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=99.97  E-value=2.5e-30  Score=243.60  Aligned_cols=228  Identities=15%  Similarity=0.142  Sum_probs=168.3

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHC-CCeEEEEecCCCcccccccCCceeEEeccCCCHhH-HHHHhcCCCEEEEccccC
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDR-GLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDS-WKEALDGVTAVISCVGGF  132 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~-g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~-~~~~~~~~d~vi~~a~~~  132 (286)
                      .+|+|||||||||||++|+++|+++ |++|++++|...........++++++.+|++|.+. +.++++++|+|||+|+..
T Consensus       314 ~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~gDl~d~~~~l~~~l~~~D~ViHlAa~~  393 (660)
T PRK08125        314 RRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRFLGHPRFHFVEGDISIHSEWIEYHIKKCDVVLPLVAIA  393 (660)
T ss_pred             cCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhhcCCCceEEEeccccCcHHHHHHHhcCCCEEEECcccc
Confidence            3578999999999999999999986 79999999976542211223479999999998655 577889999999999854


Q ss_pred             C------CcchhhhhhhHHHHHHHHHHHHcCCCEEEEEecC-CcCCCC-----------------ccccchHHHHHHHHH
Q 023205          133 G------SNSYMYKINGTANINAIRAASEKGVKRFVYISAA-DFGVAN-----------------YLLQGYYEGKRAAET  188 (286)
Q Consensus       133 ~------~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~-~~~~~~-----------------~~~~~y~~sK~~~E~  188 (286)
                      .      ++...+++|+.++.+++++|++.+ ++|||+||. +||...                 .+.+.|+.+|..+|+
T Consensus       394 ~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~~-~~~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~s~Yg~sK~~~E~  472 (660)
T PRK08125        394 TPIEYTRNPLRVFELDFEENLKIIRYCVKYN-KRIIFPSTSEVYGMCTDKYFDEDTSNLIVGPINKQRWIYSVSKQLLDR  472 (660)
T ss_pred             CchhhccCHHHHHHhhHHHHHHHHHHHHhcC-CeEEEEcchhhcCCCCCCCcCccccccccCCCCCCccchHHHHHHHHH
Confidence            3      223567899999999999999988 799999994 455311                 122469999999999


Q ss_pred             HHHH---hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCC--CCccCCCccHHHHHHHHHHHh
Q 023205          189 ELLT---RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLV--GPLFTPPVNVTVVAKVAVRAA  263 (286)
Q Consensus       189 ~~~~---~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~i~v~Dva~~~~~~l  263 (286)
                      +++.   ..|++++++||+.+|||+..... .........+..+........++.+.  |+..++|+|++|+|++++.++
T Consensus       473 ~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~-~~~~~~~~~i~~~i~~~~~~~~i~~~g~g~~~rd~i~v~Dva~a~~~~l  551 (660)
T PRK08125        473 VIWAYGEKEGLRFTLFRPFNWMGPRLDNLN-AARIGSSRAITQLILNLVEGSPIKLVDGGKQKRCFTDIRDGIEALFRII  551 (660)
T ss_pred             HHHHHHHhcCCceEEEEEceeeCCCccccc-cccccccchHHHHHHHhcCCCCeEEeCCCceeeceeeHHHHHHHHHHHH
Confidence            8864   46899999999999999753210 00000012233344444434444443  455899999999999999999


Q ss_pred             cCCC--CCCCeeEecccc-ccccc
Q 023205          264 TDPV--FPPGIVDVHGIL-RYSQK  284 (286)
Q Consensus       264 ~~~~--~~~~~~~l~~~~-~~s~~  284 (286)
                      +++.  ..+++||+++++ .+|.+
T Consensus       552 ~~~~~~~~g~iyni~~~~~~~s~~  575 (660)
T PRK08125        552 ENKDNRCDGQIINIGNPDNEASIR  575 (660)
T ss_pred             hccccccCCeEEEcCCCCCceeHH
Confidence            8653  347899999985 56653

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=99.97  E-value=1.8e-30  Score=232.44  Aligned_cols=215  Identities=19%  Similarity=0.151  Sum_probs=161.9

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc----cccCCceeEEeccCCCHhHHHHHhcCCCEEEEccc
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR----DSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVG  130 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~----~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~  130 (286)
                      ..|+|||||||||||++|+++|+++|++|++++|.......    .....+++++.+|+.+.     .+.++|+|||+|+
T Consensus       119 ~~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~~~~~~~~~~~~~Di~~~-----~~~~~D~ViHlAa  193 (436)
T PLN02166        119 KRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLFGNPRFELIRHDVVEP-----ILLEVDQIYHLAC  193 (436)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhhhccCCceEEEECccccc-----cccCCCEEEECce
Confidence            35789999999999999999999999999999986432111    11124688899998764     3568999999998


Q ss_pred             cCC------CcchhhhhhhHHHHHHHHHHHHcCCCEEEEEecC-CcCCCC---------------ccccchHHHHHHHHH
Q 023205          131 GFG------SNSYMYKINGTANINAIRAASEKGVKRFVYISAA-DFGVAN---------------YLLQGYYEGKRAAET  188 (286)
Q Consensus       131 ~~~------~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~-~~~~~~---------------~~~~~y~~sK~~~E~  188 (286)
                      ...      ++...++.|+.++.+++++|++.++ +|||+||. +|+...               .+.+.|+.+|..+|+
T Consensus       194 ~~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~g~-r~V~~SS~~VYg~~~~~p~~E~~~~~~~p~~p~s~Yg~SK~~aE~  272 (436)
T PLN02166        194 PASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAET  272 (436)
T ss_pred             eccchhhccCHHHHHHHHHHHHHHHHHHHHHhCC-EEEEECcHHHhCCCCCCCCCccccccCCCCCCCCchHHHHHHHHH
Confidence            643      2345678999999999999999886 89999984 565321               124569999999999


Q ss_pred             HHHH---hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCC--ccCCCccHHHHHHHHHHHh
Q 023205          189 ELLT---RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGP--LFTPPVNVTVVAKVAVRAA  263 (286)
Q Consensus       189 ~~~~---~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~--~~~~~i~v~Dva~~~~~~l  263 (286)
                      +++.   ..+++++++||+.+|||......       +..+..+........++.+.|+  ..++|+|++|++++++.++
T Consensus       273 ~~~~y~~~~~l~~~ilR~~~vYGp~~~~~~-------~~~i~~~i~~~l~~~~i~v~g~g~~~rdfi~V~Dva~ai~~~~  345 (436)
T PLN02166        273 LAMDYHRGAGVEVRIARIFNTYGPRMCLDD-------GRVVSNFVAQTIRKQPMTVYGDGKQTRSFQYVSDLVDGLVALM  345 (436)
T ss_pred             HHHHHHHHhCCCeEEEEEccccCCCCCCCc-------cchHHHHHHHHhcCCCcEEeCCCCeEEeeEEHHHHHHHHHHHH
Confidence            8865   46899999999999999753210       1233333333333445555444  4789999999999999998


Q ss_pred             cCCCCCCCeeEeccccccccc
Q 023205          264 TDPVFPPGIVDVHGILRYSQK  284 (286)
Q Consensus       264 ~~~~~~~~~~~l~~~~~~s~~  284 (286)
                      +.+.  +++||+++++.+|++
T Consensus       346 ~~~~--~giyNIgs~~~~Si~  364 (436)
T PLN02166        346 EGEH--VGPFNLGNPGEFTML  364 (436)
T ss_pred             hcCC--CceEEeCCCCcEeHH
Confidence            7643  569999999988875

>PLN02206 UDP-glucuronate decarboxylase

Probab=99.97  E-value=3.5e-30  Score=230.94  Aligned_cols=215  Identities=20%  Similarity=0.178  Sum_probs=162.1

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc----cccCCceeEEeccCCCHhHHHHHhcCCCEEEEccc
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR----DSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVG  130 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~----~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~  130 (286)
                      ..|+|||||||||||++|+++|+++|++|++++|.......    .....+++++.+|+.++     ++.++|+|||+|+
T Consensus       118 ~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~~~~~~~~~~~~~i~~D~~~~-----~l~~~D~ViHlAa  192 (442)
T PLN02206        118 KGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENVMHHFSNPNFELIRHDVVEP-----ILLEVDQIYHLAC  192 (442)
T ss_pred             CCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhhhhhhccCCceEEEECCccCh-----hhcCCCEEEEeee
Confidence            35789999999999999999999999999999875332111    11235788999998765     3467999999998


Q ss_pred             cCC------CcchhhhhhhHHHHHHHHHHHHcCCCEEEEEecC-CcCCCC------------cc---ccchHHHHHHHHH
Q 023205          131 GFG------SNSYMYKINGTANINAIRAASEKGVKRFVYISAA-DFGVAN------------YL---LQGYYEGKRAAET  188 (286)
Q Consensus       131 ~~~------~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~-~~~~~~------------~~---~~~y~~sK~~~E~  188 (286)
                      ...      ++...+++|+.++.+++++|++.++ +|||+||. +|+...            .|   .+.|+.+|..+|+
T Consensus       193 ~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~g~-r~V~~SS~~VYg~~~~~p~~E~~~~~~~P~~~~s~Y~~SK~~aE~  271 (442)
T PLN02206        193 PASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKRTAET  271 (442)
T ss_pred             ecchhhhhcCHHHHHHHHHHHHHHHHHHHHHhCC-EEEEECChHHhCCCCCCCCCccccccCCCCCccchHHHHHHHHHH
Confidence            542      3346678999999999999999986 89999995 465321            12   3579999999999


Q ss_pred             HHHH---hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCC--CccCCCccHHHHHHHHHHHh
Q 023205          189 ELLT---RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVG--PLFTPPVNVTVVAKVAVRAA  263 (286)
Q Consensus       189 ~~~~---~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--~~~~~~i~v~Dva~~~~~~l  263 (286)
                      ++..   ..+++++++||+.+|||......       +..+..+........++.+.|  +..++|+|++|+|++++.++
T Consensus       272 ~~~~y~~~~g~~~~ilR~~~vyGp~~~~~~-------~~~v~~~i~~~l~~~~i~i~g~G~~~rdfi~V~Dva~ai~~a~  344 (442)
T PLN02206        272 LTMDYHRGANVEVRIARIFNTYGPRMCIDD-------GRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLM  344 (442)
T ss_pred             HHHHHHHHhCCCeEEEEeccccCCCCCccc-------cchHHHHHHHHHcCCCcEEeCCCCEEEeEEeHHHHHHHHHHHH
Confidence            8864   46899999999999999743110       123333434333344555444  44789999999999999998


Q ss_pred             cCCCCCCCeeEeccccccccc
Q 023205          264 TDPVFPPGIVDVHGILRYSQK  284 (286)
Q Consensus       264 ~~~~~~~~~~~l~~~~~~s~~  284 (286)
                      +++.  ++.||+++++.++++
T Consensus       345 e~~~--~g~yNIgs~~~~sl~  363 (442)
T PLN02206        345 EGEH--VGPFNLGNPGEFTML  363 (442)
T ss_pred             hcCC--CceEEEcCCCceeHH
Confidence            7653  569999999988875

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=99.97  E-value=1.8e-29  Score=219.43  Aligned_cols=217  Identities=21%  Similarity=0.268  Sum_probs=162.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc--c-----ccCCceeEEeccCCCHhHHHHHhcCCCEEEEc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--D-----SWANNVIWHQGNLLSSDSWKEALDGVTAVISC  128 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~--~-----~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~  128 (286)
                      +|+||||||+||||++++++|+++|++|++++|+......  .     ....+++++.+|++|.+.+.++++++|+|||+
T Consensus         5 ~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih~   84 (325)
T PLN02989          5 GKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAIDGCETVFHT   84 (325)
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHcCCCEEEEe
Confidence            5799999999999999999999999999999988654211  0     01246889999999999999999999999999


Q ss_pred             cccCC------CcchhhhhhhHHHHHHHHHHHHc-CCCEEEEEecC-CcCCCC---------------c------cccch
Q 023205          129 VGGFG------SNSYMYKINGTANINAIRAASEK-GVKRFVYISAA-DFGVAN---------------Y------LLQGY  179 (286)
Q Consensus       129 a~~~~------~~~~~~~~~~~~~~~l~~~a~~~-~v~~~v~~Ss~-~~~~~~---------------~------~~~~y  179 (286)
                      ||...      .....+++|+.++.+++++|.+. ++++||++||. .++...               .      +.++|
T Consensus        85 A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y  164 (325)
T PLN02989         85 ASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTSSMAAVLAPETKLGPNDVVDETFFTNPSFAEERKQWY  164 (325)
T ss_pred             CCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecchhheecCCccCCCCCccCcCCCCchhHhcccccch
Confidence            98642      12356689999999999999885 57899999994 332210               0      12579


Q ss_pred             HHHHHHHHHHHHH---hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHH
Q 023205          180 YEGKRAAETELLT---RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVA  256 (286)
Q Consensus       180 ~~sK~~~E~~~~~---~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva  256 (286)
                      +.+|..+|++++.   ..+++++++||+.+|||...+..       +.....+........  +. +...++|+|++|+|
T Consensus       165 ~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~-------~~~~~~i~~~~~~~~--~~-~~~~r~~i~v~Dva  234 (325)
T PLN02989        165 VLSKTLAEDAAWRFAKDNEIDLIVLNPGLVTGPILQPTL-------NFSVAVIVELMKGKN--PF-NTTHHRFVDVRDVA  234 (325)
T ss_pred             HHHHHHHHHHHHHHHHHcCCeEEEEcCCceeCCCCCCCC-------CchHHHHHHHHcCCC--CC-CCcCcCeeEHHHHH
Confidence            9999999998864   56899999999999999764321       111222333222211  22 23457899999999


Q ss_pred             HHHHHHhcCCCCCCCeeEeccccccccc
Q 023205          257 KVAVRAATDPVFPPGIVDVHGILRYSQK  284 (286)
Q Consensus       257 ~~~~~~l~~~~~~~~~~~l~~~~~~s~~  284 (286)
                      ++++.+++.+.. ++.||++++ .+|++
T Consensus       235 ~a~~~~l~~~~~-~~~~ni~~~-~~s~~  260 (325)
T PLN02989        235 LAHVKALETPSA-NGRYIIDGP-VVTIK  260 (325)
T ss_pred             HHHHHHhcCccc-CceEEEecC-CCCHH
Confidence            999999987654 568999654 67764

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=99.97  E-value=7.5e-30  Score=218.06  Aligned_cols=200  Identities=22%  Similarity=0.270  Sum_probs=162.9

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCC--CEEEEccccCCC-
Q 023205           58 KLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGV--TAVISCVGGFGS-  134 (286)
Q Consensus        58 ~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~--d~vi~~a~~~~~-  134 (286)
                      +|||||||||+|++++++|+++|++|++++|.                .+|+.|.+.+.++++++  |+|||+++.... 
T Consensus         1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~----------------~~d~~~~~~~~~~~~~~~~d~vi~~a~~~~~~   64 (287)
T TIGR01214         1 RILITGANGQLGRELVQQLSPEGRVVVALTSS----------------QLDLTDPEALERLLRAIRPDAVVNTAAYTDVD   64 (287)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc----------------ccCCCCHHHHHHHHHhCCCCEEEECCcccccc
Confidence            58999999999999999999999999999985                47999999999999876  999999987532 


Q ss_pred             -----cchhhhhhhHHHHHHHHHHHHcCCCEEEEEecC-CcCCC----------CccccchHHHHHHHHHHHHHhCCCcE
Q 023205          135 -----NSYMYKINGTANINAIRAASEKGVKRFVYISAA-DFGVA----------NYLLQGYYEGKRAAETELLTRYPYGG  198 (286)
Q Consensus       135 -----~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~-~~~~~----------~~~~~~y~~sK~~~E~~~~~~~g~~~  198 (286)
                           ....++.|+.++.+++++|++.+. +||++||. +|+..          ..+.+.|+.+|..+|++++. .+.++
T Consensus        65 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~~K~~~E~~~~~-~~~~~  142 (287)
T TIGR01214        65 GAESDPEKAFAVNALAPQNLARAAARHGA-RLVHISTDYVFDGEGKRPYREDDATNPLNVYGQSKLAGEQAIRA-AGPNA  142 (287)
T ss_pred             ccccCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEeeeeeecCCCCCCCCCCCCCCCcchhhHHHHHHHHHHHH-hCCCe
Confidence                 234578999999999999998885 89999984 44331          12457899999999998876 57899


Q ss_pred             EEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcCCCCCCCeeEeccc
Q 023205          199 VILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDPVFPPGIVDVHGI  278 (286)
Q Consensus       199 ~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~l~~~  278 (286)
                      +++||+.+||+....          .+...+........+++..++...++++++|+|+++..+++.+...+++||++++
T Consensus       143 ~ilR~~~v~G~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~~~~~ni~~~  212 (287)
T TIGR01214       143 LIVRTSWLYGGGGGR----------NFVRTMLRLAGRGEELRVVDDQIGSPTYAKDLARVIAALLQRLARARGVYHLANS  212 (287)
T ss_pred             EEEEeeecccCCCCC----------CHHHHHHHHhhcCCCceEecCCCcCCcCHHHHHHHHHHHHhhccCCCCeEEEECC
Confidence            999999999997421          2334444444545566666677889999999999999999876555889999999


Q ss_pred             ccccccC
Q 023205          279 LRYSQKS  285 (286)
Q Consensus       279 ~~~s~~~  285 (286)
                      +.+++++
T Consensus       213 ~~~s~~e  219 (287)
T TIGR01214       213 GQCSWYE  219 (287)
T ss_pred             CCcCHHH
Confidence            9998753

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.97  E-value=6.1e-30  Score=241.97  Aligned_cols=220  Identities=16%  Similarity=0.221  Sum_probs=170.4

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHC--CCeEEEEecCCCc-cc----ccccCCceeEEeccCCCHhHHHHHh--cCCCEE
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDR--GLTVASLSRSGRS-SL----RDSWANNVIWHQGNLLSSDSWKEAL--DGVTAV  125 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~--g~~V~~l~R~~~~-~~----~~~~~~~~~~i~~Dl~d~~~~~~~~--~~~d~v  125 (286)
                      .+|+|||||||||||++|+++|+++  +++|++++|.... ..    .....++++++.+|+.|.+.+..++  .++|+|
T Consensus         5 ~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~D~V   84 (668)
T PLN02260          5 EPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPSKSSPNFKFVKGDIASADLVNYLLITEGIDTI   84 (668)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhhcccCCCeEEEECCCCChHHHHHHHhhcCCCEE
Confidence            3579999999999999999999998  6899999885311 01    0111357999999999998888776  579999


Q ss_pred             EEccccCCC------cchhhhhhhHHHHHHHHHHHHcC-CCEEEEEecC-CcCCCC-------------ccccchHHHHH
Q 023205          126 ISCVGGFGS------NSYMYKINGTANINAIRAASEKG-VKRFVYISAA-DFGVAN-------------YLLQGYYEGKR  184 (286)
Q Consensus       126 i~~a~~~~~------~~~~~~~~~~~~~~l~~~a~~~~-v~~~v~~Ss~-~~~~~~-------------~~~~~y~~sK~  184 (286)
                      ||+|+....      +...++.|+.++.+++++|++.+ +++|||+||. +|+...             .|.+.|+.+|.
T Consensus        85 iHlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS~~vyg~~~~~~~~~~~E~~~~~p~~~Y~~sK~  164 (668)
T PLN02260         85 MHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDADVGNHEASQLLPTNPYSATKA  164 (668)
T ss_pred             EECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcchHHhCCCccccccCccccCCCCCCCCcHHHHH
Confidence            999997542      23567899999999999999987 8999999994 454321             14578999999


Q ss_pred             HHHHHHHH---hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCC--CccCCCccHHHHHHHH
Q 023205          185 AAETELLT---RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVG--PLFTPPVNVTVVAKVA  259 (286)
Q Consensus       185 ~~E~~~~~---~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--~~~~~~i~v~Dva~~~  259 (286)
                      .+|+++++   ..+++++++||+.+||+.....         .++..+.........+++.|  +..++|+|++|+|+++
T Consensus       165 ~aE~~v~~~~~~~~l~~vilR~~~VyGp~~~~~---------~~i~~~~~~a~~g~~i~i~g~g~~~r~~ihV~Dva~a~  235 (668)
T PLN02260        165 GAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPE---------KLIPKFILLAMQGKPLPIHGDGSNVRSYLYCEDVAEAF  235 (668)
T ss_pred             HHHHHHHHHHHHcCCCEEEECcccccCcCCCcc---------cHHHHHHHHHhCCCCeEEecCCCceEeeEEHHHHHHHH
Confidence            99998864   4689999999999999975322         23444444444455666554  4468999999999999


Q ss_pred             HHHhcCCCCCCCeeEeccccccccc
Q 023205          260 VRAATDPVFPPGIVDVHGILRYSQK  284 (286)
Q Consensus       260 ~~~l~~~~~~~~~~~l~~~~~~s~~  284 (286)
                      +.+++.... +++||+++++.+++.
T Consensus       236 ~~~l~~~~~-~~vyni~~~~~~s~~  259 (668)
T PLN02260        236 EVVLHKGEV-GHVYNIGTKKERRVI  259 (668)
T ss_pred             HHHHhcCCC-CCEEEECCCCeeEHH
Confidence            999876543 789999999888764

>PLN02650 dihydroflavonol-4-reductase

Probab=99.97  E-value=2.5e-29  Score=220.86  Aligned_cols=219  Identities=18%  Similarity=0.202  Sum_probs=159.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc--c-----ccCCceeEEeccCCCHhHHHHHhcCCCEEEEc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--D-----SWANNVIWHQGNLLSSDSWKEALDGVTAVISC  128 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~--~-----~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~  128 (286)
                      .++||||||+||||++++++|+++|++|++++|+......  .     ....+++++.+|+.|.+.+.++++++|+|||+
T Consensus         5 ~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~d~ViH~   84 (351)
T PLN02650          5 KETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIRGCTGVFHV   84 (351)
T ss_pred             CCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHhCCCEEEEe
Confidence            5689999999999999999999999999999998644211  0     01135889999999999999999999999999


Q ss_pred             cccCCC----c-chhhhhhhHHHHHHHHHHHHcC-CCEEEEEecC-CcCCC--------Cc-------------cccchH
Q 023205          129 VGGFGS----N-SYMYKINGTANINAIRAASEKG-VKRFVYISAA-DFGVA--------NY-------------LLQGYY  180 (286)
Q Consensus       129 a~~~~~----~-~~~~~~~~~~~~~l~~~a~~~~-v~~~v~~Ss~-~~~~~--------~~-------------~~~~y~  180 (286)
                      |+....    + ...+++|+.++.+++++|++.+ +++|||+||. .++..        +.             +.+.|+
T Consensus        85 A~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~  164 (351)
T PLN02650         85 ATPMDFESKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTVNVEEHQKPVYDEDCWSDLDFCRRKKMTGWMYF  164 (351)
T ss_pred             CCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEecchhhcccCCCCCCccCcccCCchhhhhccccccchHH
Confidence            986531    2 2567899999999999999877 7899999995 33211        00             124799


Q ss_pred             HHHHHHHHHHHH---hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHH
Q 023205          181 EGKRAAETELLT---RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAK  257 (286)
Q Consensus       181 ~sK~~~E~~~~~---~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~  257 (286)
                      .+|..+|.+++.   ..|++++++||+.+|||......  +    ..+...+.. ...... .......++|+|++|+|+
T Consensus       165 ~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~Gp~~~~~~--~----~~~~~~~~~-~~~~~~-~~~~~~~r~~v~V~Dva~  236 (351)
T PLN02650        165 VSKTLAEKAAWKYAAENGLDFISIIPTLVVGPFISTSM--P----PSLITALSL-ITGNEA-HYSIIKQGQFVHLDDLCN  236 (351)
T ss_pred             HHHHHHHHHHHHHHHHcCCeEEEECCCceECCCCCCCC--C----ccHHHHHHH-hcCCcc-ccCcCCCcceeeHHHHHH
Confidence            999999998864   56999999999999999764321  1    111211111 111111 111123479999999999


Q ss_pred             HHHHHhcCCCCCCCeeEeccccccccc
Q 023205          258 VAVRAATDPVFPPGIVDVHGILRYSQK  284 (286)
Q Consensus       258 ~~~~~l~~~~~~~~~~~l~~~~~~s~~  284 (286)
                      +++.+++++.. ++.| +.+.+.++.+
T Consensus       237 a~~~~l~~~~~-~~~~-i~~~~~~s~~  261 (351)
T PLN02650        237 AHIFLFEHPAA-EGRY-ICSSHDATIH  261 (351)
T ss_pred             HHHHHhcCcCc-CceE-EecCCCcCHH
Confidence            99999987654 4478 4444556543

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=99.97  E-value=1.9e-29  Score=220.89  Aligned_cols=220  Identities=15%  Similarity=0.065  Sum_probs=164.4

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcc----cccc-------cCCceeEEeccCCCHhHHHHHhcC--CC
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSS----LRDS-------WANNVIWHQGNLLSSDSWKEALDG--VT  123 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~----~~~~-------~~~~~~~i~~Dl~d~~~~~~~~~~--~d  123 (286)
                      |+||||||+||||++++++|+++|++|++++|+.+..    ....       ...+++++++|++|.+.+.+++++  +|
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d   80 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEIKPT   80 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhCCCC
Confidence            5899999999999999999999999999999986421    1110       024689999999999999999985  59


Q ss_pred             EEEEccccCC------CcchhhhhhhHHHHHHHHHHHHcCCC---EEEEEecC-CcCCC----------CccccchHHHH
Q 023205          124 AVISCVGGFG------SNSYMYKINGTANINAIRAASEKGVK---RFVYISAA-DFGVA----------NYLLQGYYEGK  183 (286)
Q Consensus       124 ~vi~~a~~~~------~~~~~~~~~~~~~~~l~~~a~~~~v~---~~v~~Ss~-~~~~~----------~~~~~~y~~sK  183 (286)
                      +|||+|+...      .+...+++|+.++.+++++|++.+++   +|||+||. +||..          ..|.+.|+.+|
T Consensus        81 ~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK  160 (343)
T TIGR01472        81 EIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTLGLIKSVKFYQASTSELYGKVQEIPQNETTPFYPRSPYAAAK  160 (343)
T ss_pred             EEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHhCCCcCeeEEEeccHHhhCCCCCCCCCCCCCCCCCChhHHHH
Confidence            9999998643      12344577889999999999988764   89999994 56532          12567899999


Q ss_pred             HHHHHHHHH---hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCC-CCCC--CCCccCCCccHHHHHH
Q 023205          184 RAAETELLT---RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLS-QLPL--VGPLFTPPVNVTVVAK  257 (286)
Q Consensus       184 ~~~E~~~~~---~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~g~~~~~~i~v~Dva~  257 (286)
                      ..+|.+++.   ..|+++++.|+..+|||.....      .+...+..+........ ....  .|+..++|+|++|+|+
T Consensus       161 ~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~------~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~V~D~a~  234 (343)
T TIGR01472       161 LYAHWITVNYREAYGLFAVNGILFNHESPRRGEN------FVTRKITRAAAKIKLGLQEKLYLGNLDAKRDWGHAKDYVE  234 (343)
T ss_pred             HHHHHHHHHHHHHhCCceEEEeecccCCCCCCcc------ccchHHHHHHHHHHcCCCCceeeCCCccccCceeHHHHHH
Confidence            999998854   4689999999999999864221      11112222222222222 2222  2456899999999999


Q ss_pred             HHHHHhcCCCCCCCeeEeccccccccc
Q 023205          258 VAVRAATDPVFPPGIVDVHGILRYSQK  284 (286)
Q Consensus       258 ~~~~~l~~~~~~~~~~~l~~~~~~s~~  284 (286)
                      +++.+++++.  ++.|||++++.+|+.
T Consensus       235 a~~~~~~~~~--~~~yni~~g~~~s~~  259 (343)
T TIGR01472       235 AMWLMLQQDK--PDDYVIATGETHSVR  259 (343)
T ss_pred             HHHHHHhcCC--CccEEecCCCceeHH
Confidence            9999998654  468999999888765

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.97  E-value=2.7e-29  Score=222.61  Aligned_cols=212  Identities=22%  Similarity=0.279  Sum_probs=167.1

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc-------cccCCceeEEeccCCCHhHHHHHhc----CC
Q 023205           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-------DSWANNVIWHQGNLLSSDSWKEALD----GV  122 (286)
Q Consensus        54 ~~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~----~~  122 (286)
                      ..+++|+||||||+||++++++|+++|++|++++|+..+...       ....++++++++|++|++.+.++++    ++
T Consensus        58 ~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~~~  137 (390)
T PLN02657         58 PKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSEGDPV  137 (390)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHhCCCC
Confidence            346799999999999999999999999999999998654211       0113578999999999999999988    59


Q ss_pred             CEEEEccccCC-CcchhhhhhhHHHHHHHHHHHHcCCCEEEEEecCCcCCCCccccchHHHHHHHHHHHHH-hCCCcEEE
Q 023205          123 TAVISCVGGFG-SNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLT-RYPYGGVI  200 (286)
Q Consensus       123 d~vi~~a~~~~-~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~~-~~g~~~~i  200 (286)
                      |+||||++... .....+++|+.++.+++++|++.++++||++||...   ..+...|..+|...|+.+.+ ..++++++
T Consensus       138 D~Vi~~aa~~~~~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~~v---~~p~~~~~~sK~~~E~~l~~~~~gl~~tI  214 (390)
T PLN02657        138 DVVVSCLASRTGGVKDSWKIDYQATKNSLDAGREVGAKHFVLLSAICV---QKPLLEFQRAKLKFEAELQALDSDFTYSI  214 (390)
T ss_pred             cEEEECCccCCCCCccchhhHHHHHHHHHHHHHHcCCCEEEEEeeccc---cCcchHHHHHHHHHHHHHHhccCCCCEEE
Confidence            99999987643 234567889999999999999999999999999532   23456799999999998875 57899999


Q ss_pred             EeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCcc---CCCccHHHHHHHHHHHhcCCCCCCCeeEecc
Q 023205          201 LRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLF---TPPVNVTVVAKVAVRAATDPVFPPGIVDVHG  277 (286)
Q Consensus       201 lRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~---~~~i~v~Dva~~~~~~l~~~~~~~~~~~l~~  277 (286)
                      +||+.+||+..            .    .........++.+.|++.   ..+|+++|+|++++.++.++...+++||+++
T Consensus       215 lRp~~~~~~~~------------~----~~~~~~~g~~~~~~GdG~~~~~~~I~v~DlA~~i~~~~~~~~~~~~~~~Igg  278 (390)
T PLN02657        215 VRPTAFFKSLG------------G----QVEIVKDGGPYVMFGDGKLCACKPISEADLASFIADCVLDESKINKVLPIGG  278 (390)
T ss_pred             EccHHHhcccH------------H----HHHhhccCCceEEecCCcccccCceeHHHHHHHHHHHHhCccccCCEEEcCC
Confidence            99999997421            1    122233334444445542   3579999999999999987776689999999


Q ss_pred             c-cccccc
Q 023205          278 I-LRYSQK  284 (286)
Q Consensus       278 ~-~~~s~~  284 (286)
                      | +.+|++
T Consensus       279 p~~~~S~~  286 (390)
T PLN02657        279 PGKALTPL  286 (390)
T ss_pred             CCcccCHH
Confidence            7 577765

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.97  E-value=1.8e-29  Score=218.12  Aligned_cols=216  Identities=27%  Similarity=0.267  Sum_probs=166.4

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCC-CEEEEccccCCCc-
Q 023205           58 KLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGV-TAVISCVGGFGSN-  135 (286)
Q Consensus        58 ~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~-d~vi~~a~~~~~~-  135 (286)
                      +|||||||||||++|+++|+++|++|++++|...+.....  .+++++.+|++|.+.+.+..+++ |+|||+|+....+ 
T Consensus         2 ~ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--~~~~~~~~d~~~~~~~~~~~~~~~d~vih~aa~~~~~~   79 (314)
T COG0451           2 RILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL--SGVEFVVLDLTDRDLVDELAKGVPDAVIHLAAQSSVPD   79 (314)
T ss_pred             eEEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc--cccceeeecccchHHHHHHHhcCCCEEEEccccCchhh
Confidence            4999999999999999999999999999999876643332  57899999999998888888888 9999999876422 


Q ss_pred             ------chhhhhhhHHHHHHHHHHHHcCCCEEEEEecC-CcCCC------------CccccchHHHHHHHHHHHHHh---
Q 023205          136 ------SYMYKINGTANINAIRAASEKGVKRFVYISAA-DFGVA------------NYLLQGYYEGKRAAETELLTR---  193 (286)
Q Consensus       136 ------~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~-~~~~~------------~~~~~~y~~sK~~~E~~~~~~---  193 (286)
                            ...+.+|+.++.+++++|++.++++|||.||. .++..            ..|.+.|+.+|..+|+.+++.   
T Consensus        80 ~~~~~~~~~~~~nv~gt~~ll~aa~~~~~~~~v~~ss~~~~~~~~~~~~~~E~~~~~~p~~~Yg~sK~~~E~~~~~~~~~  159 (314)
T COG0451          80 SNASDPAEFLDVNVDGTLNLLEAARAAGVKRFVFASSVSVVYGDPPPLPIDEDLGPPRPLNPYGVSKLAAEQLLRAYARL  159 (314)
T ss_pred             hhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCceECCCCCCCCcccccCCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence                  23779999999999999999999999997773 23321            122336999999999988763   


Q ss_pred             CCCcEEEEeeCeeecCCCCCccccCccccCchHHH-HHHhcccCCCCCCC--CCccCCCccHHHHHHHHHHHhcCCCCCC
Q 023205          194 YPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEM-VLQHAKPLSQLPLV--GPLFTPPVNVTVVAKVAVRAATDPVFPP  270 (286)
Q Consensus       194 ~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~--g~~~~~~i~v~Dva~~~~~~l~~~~~~~  270 (286)
                      .|++++++||+.+|||+....+  +    ...... +.........+...  ++..+++++++|++++++.+++++... 
T Consensus       160 ~~~~~~ilR~~~vyGp~~~~~~--~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~-  232 (314)
T COG0451         160 YGLPVVILRPFNVYGPGDKPDL--S----SGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVADALLLALENPDGG-  232 (314)
T ss_pred             hCCCeEEEeeeeeeCCCCCCCC--C----cCcHHHHHHHHHhCCCcceEeCCCceeEeeEeHHHHHHHHHHHHhCCCCc-
Confidence            4899999999999999876541  0    012222 22223233223333  344678999999999999999987753 


Q ss_pred             CeeEecccc-cccc
Q 023205          271 GIVDVHGIL-RYSQ  283 (286)
Q Consensus       271 ~~~~l~~~~-~~s~  283 (286)
                       .||++++. .++.
T Consensus       233 -~~ni~~~~~~~~~  245 (314)
T COG0451         233 -VFNIGSGTAEITV  245 (314)
T ss_pred             -EEEeCCCCCcEEH
Confidence             99999986 5554

>PLN02686 cinnamoyl-CoA reductase

Probab=99.97  E-value=1.5e-29  Score=223.01  Aligned_cols=218  Identities=17%  Similarity=0.155  Sum_probs=163.7

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc--cc--------cCCceeEEeccCCCHhHHHHHhcCCC
Q 023205           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DS--------WANNVIWHQGNLLSSDSWKEALDGVT  123 (286)
Q Consensus        54 ~~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~--~~--------~~~~~~~i~~Dl~d~~~~~~~~~~~d  123 (286)
                      .++++||||||+||||++++++|+++|++|++++|+.+....  ..        ...+++++.+|++|.+.+.++++++|
T Consensus        51 ~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~~~d  130 (367)
T PLN02686         51 AEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKLREMEMFGEMGRSNDGIWTVMANLTEPESLHEAFDGCA  130 (367)
T ss_pred             CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhccccccCCceEEEEcCCCCHHHHHHHHHhcc
Confidence            346799999999999999999999999999999887543111  10        01358899999999999999999999


Q ss_pred             EEEEccccCCC------cchhhhhhhHHHHHHHHHHHHc-CCCEEEEEecC---CcCC--C-C-----------------
Q 023205          124 AVISCVGGFGS------NSYMYKINGTANINAIRAASEK-GVKRFVYISAA---DFGV--A-N-----------------  173 (286)
Q Consensus       124 ~vi~~a~~~~~------~~~~~~~~~~~~~~l~~~a~~~-~v~~~v~~Ss~---~~~~--~-~-----------------  173 (286)
                      .|||+++....      .....++|+.++.+++++|++. ++++|||+||.   .|+.  . .                 
T Consensus       131 ~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~v~r~V~~SS~~~~vyg~~~~~~~~~~i~E~~~~~~~~~~  210 (367)
T PLN02686        131 GVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTESVRKCVFTSSLLACVWRQNYPHDLPPVIDEESWSDESFCR  210 (367)
T ss_pred             EEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhcCCccEEEEeccHHHhcccccCCCCCCcccCCCCCCChhhcc
Confidence            99999986532      1345678999999999999986 79999999994   3432  0 0                 


Q ss_pred             ccccchHHHHHHHHHHHHH---hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCc
Q 023205          174 YLLQGYYEGKRAAETELLT---RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPV  250 (286)
Q Consensus       174 ~~~~~y~~sK~~~E~~~~~---~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i  250 (286)
                      .+...|+.+|..+|++++.   ..|++++++||+.+|||......  +    ..    +.....  +.+++.|++..+|+
T Consensus       211 ~p~~~Y~~sK~~~E~~~~~~~~~~gl~~v~lRp~~vyGp~~~~~~--~----~~----~~~~~~--g~~~~~g~g~~~~v  278 (367)
T PLN02686        211 DNKLWYALGKLKAEKAAWRAARGKGLKLATICPALVTGPGFFRRN--S----TA----TIAYLK--GAQEMLADGLLATA  278 (367)
T ss_pred             cccchHHHHHHHHHHHHHHHHHhcCceEEEEcCCceECCCCCCCC--C----hh----HHHHhc--CCCccCCCCCcCeE
Confidence            1234799999999998864   46999999999999999753211  0    01    112222  13455566777899


Q ss_pred             cHHHHHHHHHHHhcCC--CCCCCeeEeccccccccc
Q 023205          251 NVTVVAKVAVRAATDP--VFPPGIVDVHGILRYSQK  284 (286)
Q Consensus       251 ~v~Dva~~~~~~l~~~--~~~~~~~~l~~~~~~s~~  284 (286)
                      +++|+|++++.+++..  ...+++| +.+++.++.+
T Consensus       279 ~V~Dva~A~~~al~~~~~~~~~~~y-i~~g~~~s~~  313 (367)
T PLN02686        279 DVERLAEAHVCVYEAMGNKTAFGRY-ICFDHVVSRE  313 (367)
T ss_pred             EHHHHHHHHHHHHhccCCCCCCCcE-EEeCCCccHH
Confidence            9999999999999752  2346678 7676777654

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=99.97  E-value=3.1e-29  Score=216.96  Aligned_cols=217  Identities=18%  Similarity=0.181  Sum_probs=166.1

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCC--CeEEEEecCCCcc----ccc-ccCCceeEEeccCCCHhHHHHHhcC--CCEEEEc
Q 023205           58 KLLVLGGNGFVGSHICREALDRG--LTVASLSRSGRSS----LRD-SWANNVIWHQGNLLSSDSWKEALDG--VTAVISC  128 (286)
Q Consensus        58 ~VlVtGatG~iG~~l~~~Ll~~g--~~V~~l~R~~~~~----~~~-~~~~~~~~i~~Dl~d~~~~~~~~~~--~d~vi~~  128 (286)
                      +|+||||||+||++++++|+++|  ++|++++|.....    ... ...++++++.+|+.|++++.+++++  +|+|||+
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~   80 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLEDNPRYRFVKGDIGDRELVSRLFTEHQPDAVVHF   80 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhccCCCcEEEEcCCcCHHHHHHHHhhcCCCEEEEc
Confidence            58999999999999999999987  7899988743211    111 1124688999999999999999987  8999999


Q ss_pred             cccCC------CcchhhhhhhHHHHHHHHHHHHcCCC-EEEEEecC-CcCCCC-----------ccccchHHHHHHHHHH
Q 023205          129 VGGFG------SNSYMYKINGTANINAIRAASEKGVK-RFVYISAA-DFGVAN-----------YLLQGYYEGKRAAETE  189 (286)
Q Consensus       129 a~~~~------~~~~~~~~~~~~~~~l~~~a~~~~v~-~~v~~Ss~-~~~~~~-----------~~~~~y~~sK~~~E~~  189 (286)
                      |+...      .....+++|+.++.+++++|++.+.+ ++|++||. .|+...           .+.+.|+.+|..+|.+
T Consensus        81 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~v~g~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~  160 (317)
T TIGR01181        81 AAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHEFRFHHISTDEVYGDLEKGDAFTETTPLAPSSPYSASKAASDHL  160 (317)
T ss_pred             ccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEeeccceeCCCCCCCCcCCCCCCCCCCchHHHHHHHHHH
Confidence            98753      23356789999999999999887543 89999994 344321           2456799999999998


Q ss_pred             HHH---hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCC--CCccCCCccHHHHHHHHHHHhc
Q 023205          190 LLT---RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLV--GPLFTPPVNVTVVAKVAVRAAT  264 (286)
Q Consensus       190 ~~~---~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~i~v~Dva~~~~~~l~  264 (286)
                      ++.   ..+++++++||+.+||+.....         .++..+.........++..  |+..++|+|++|+|+++..+++
T Consensus       161 ~~~~~~~~~~~~~i~R~~~i~G~~~~~~---------~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~~~~~~~  231 (317)
T TIGR01181       161 VRAYHRTYGLPALITRCSNNYGPYQFPE---------KLIPLMITNALAGKPLPVYGDGQQVRDWLYVEDHCRAIYLVLE  231 (317)
T ss_pred             HHHHHHHhCCCeEEEEeccccCCCCCcc---------cHHHHHHHHHhcCCCceEeCCCceEEeeEEHHHHHHHHHHHHc
Confidence            764   5789999999999999875322         2344444444444455544  4457899999999999999997


Q ss_pred             CCCCCCCeeEeccccccccc
Q 023205          265 DPVFPPGIVDVHGILRYSQK  284 (286)
Q Consensus       265 ~~~~~~~~~~l~~~~~~s~~  284 (286)
                      +.. .+++||+++++.++++
T Consensus       232 ~~~-~~~~~~~~~~~~~s~~  250 (317)
T TIGR01181       232 KGR-VGETYNIGGGNERTNL  250 (317)
T ss_pred             CCC-CCceEEeCCCCceeHH
Confidence            654 4789999999988875

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=99.97  E-value=3.7e-29  Score=217.11  Aligned_cols=206  Identities=18%  Similarity=0.173  Sum_probs=160.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCC--CeEEEEecCCCccc---ccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRG--LTVASLSRSGRSSL---RDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVG  130 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g--~~V~~l~R~~~~~~---~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~  130 (286)
                      +|+||||||+|+||++++++|+++|  ++|++++|+.....   ......+++++.+|++|++.+.++++++|+|||+||
T Consensus         4 ~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~~~iD~Vih~Ag   83 (324)
T TIGR03589         4 NKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDKERLTRALRGVDYVVHAAA   83 (324)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHhcCCEEEECcc
Confidence            5789999999999999999999986  78999998754321   111124689999999999999999999999999998


Q ss_pred             cCC------CcchhhhhhhHHHHHHHHHHHHcCCCEEEEEecCCcCCCCccccchHHHHHHHHHHHHH------hCCCcE
Q 023205          131 GFG------SNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLT------RYPYGG  198 (286)
Q Consensus       131 ~~~------~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~~------~~g~~~  198 (286)
                      ...      ++...+++|+.++.+++++|++.++++||++||..   ...|.+.|+.+|..+|+++..      ..|+++
T Consensus        84 ~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~~~~~iV~~SS~~---~~~p~~~Y~~sK~~~E~l~~~~~~~~~~~gi~~  160 (324)
T TIGR03589        84 LKQVPAAEYNPFECIRTNINGAQNVIDAAIDNGVKRVVALSTDK---AANPINLYGATKLASDKLFVAANNISGSKGTRF  160 (324)
T ss_pred             cCCCchhhcCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeCCC---CCCCCCHHHHHHHHHHHHHHHHHhhccccCcEE
Confidence            642      22356789999999999999999999999999942   233567899999999998753      468999


Q ss_pred             EEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCC-CCCCC-CCccCCCccHHHHHHHHHHHhcCCCCCCCeeEec
Q 023205          199 VILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLS-QLPLV-GPLFTPPVNVTVVAKVAVRAATDPVFPPGIVDVH  276 (286)
Q Consensus       199 ~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-g~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~l~  276 (286)
                      +++|||++|||..            .++..+........ .+++. ++..++|++++|++++++.+++... .+++|+..
T Consensus       161 ~~lR~g~v~G~~~------------~~i~~~~~~~~~~~~~~~i~~~~~~r~~i~v~D~a~a~~~al~~~~-~~~~~~~~  227 (324)
T TIGR03589       161 SVVRYGNVVGSRG------------SVVPFFKSLKEEGVTELPITDPRMTRFWITLEQGVNFVLKSLERML-GGEIFVPK  227 (324)
T ss_pred             EEEeecceeCCCC------------CcHHHHHHHHHhCCCCeeeCCCCceEeeEEHHHHHHHHHHHHhhCC-CCCEEccC
Confidence            9999999999853            23344444443332 45543 4456789999999999999998643 36777533


Q ss_pred             c
Q 023205          277 G  277 (286)
Q Consensus       277 ~  277 (286)
                      +
T Consensus       228 ~  228 (324)
T TIGR03589       228 I  228 (324)
T ss_pred             C
Confidence            3

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=99.97  E-value=2.7e-29  Score=220.69  Aligned_cols=218  Identities=17%  Similarity=0.203  Sum_probs=163.9

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCe-EEEEecCCCc-c---cccc-cCCceeEEeccCCCHhHHHHHhcC--CCEEEEc
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGLT-VASLSRSGRS-S---LRDS-WANNVIWHQGNLLSSDSWKEALDG--VTAVISC  128 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~~-V~~l~R~~~~-~---~~~~-~~~~~~~i~~Dl~d~~~~~~~~~~--~d~vi~~  128 (286)
                      |+||||||+||||++++++|+++|++ |++++|.... .   .... ...+++++.+|++|.+++.+++++  +|+|||+
T Consensus         1 mkilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~   80 (352)
T PRK10084          1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYVFEHADICDRAELDRIFAQHQPDAVMHL   80 (352)
T ss_pred             CeEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHHhcccCCceEEEEecCCCHHHHHHHHHhcCCCEEEEC
Confidence            47999999999999999999999975 5555553211 1   1111 124578899999999999999974  8999999


Q ss_pred             cccCC------CcchhhhhhhHHHHHHHHHHHHc---------CCCEEEEEecC-CcCCC--------------------
Q 023205          129 VGGFG------SNSYMYKINGTANINAIRAASEK---------GVKRFVYISAA-DFGVA--------------------  172 (286)
Q Consensus       129 a~~~~------~~~~~~~~~~~~~~~l~~~a~~~---------~v~~~v~~Ss~-~~~~~--------------------  172 (286)
                      |+...      .....+++|+.++.+++++|++.         ++++||++||. .|+..                    
T Consensus        81 A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~E~~~  160 (352)
T PRK10084         81 AAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVENSEELPLFTETTA  160 (352)
T ss_pred             CcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCccccccccccCCCccccCC
Confidence            98653      23567899999999999999864         46799999994 55531                    


Q ss_pred             CccccchHHHHHHHHHHHHH---hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCC--CCccC
Q 023205          173 NYLLQGYYEGKRAAETELLT---RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLV--GPLFT  247 (286)
Q Consensus       173 ~~~~~~y~~sK~~~E~~~~~---~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~  247 (286)
                      ..|.+.|+.+|..+|.+++.   ..|++++++|++.+|||.....         .++..+.........+++.  |+..+
T Consensus       161 ~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~vilr~~~v~Gp~~~~~---------~~~~~~~~~~~~~~~~~~~~~g~~~~  231 (352)
T PRK10084        161 YAPSSPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPYHFPE---------KLIPLVILNALEGKPLPIYGKGDQIR  231 (352)
T ss_pred             CCCCChhHHHHHHHHHHHHHHHHHhCCCEEEEeccceeCCCcCcc---------chHHHHHHHHhcCCCeEEeCCCCeEE
Confidence            12457899999999998864   4689999999999999975321         1233333333334455544  45589


Q ss_pred             CCccHHHHHHHHHHHhcCCCCCCCeeEeccccccccc
Q 023205          248 PPVNVTVVAKVAVRAATDPVFPPGIVDVHGILRYSQK  284 (286)
Q Consensus       248 ~~i~v~Dva~~~~~~l~~~~~~~~~~~l~~~~~~s~~  284 (286)
                      +++|++|+|++++.+++.+. .+++||+++++.+++.
T Consensus       232 ~~v~v~D~a~a~~~~l~~~~-~~~~yni~~~~~~s~~  267 (352)
T PRK10084        232 DWLYVEDHARALYKVVTEGK-AGETYNIGGHNEKKNL  267 (352)
T ss_pred             eeEEHHHHHHHHHHHHhcCC-CCceEEeCCCCcCcHH
Confidence            99999999999999988643 4789999999887654

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=99.97  E-value=3e-29  Score=220.12  Aligned_cols=215  Identities=17%  Similarity=0.092  Sum_probs=164.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCccccc----ccCCceeEEeccCCCHhHHHHHhcC--CCEEEEcc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRD----SWANNVIWHQGNLLSSDSWKEALDG--VTAVISCV  129 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~----~~~~~~~~i~~Dl~d~~~~~~~~~~--~d~vi~~a  129 (286)
                      +|+||||||+||||+++++.|+++|++|++++|+.......    ....+++++.+|++|.+++.+++++  +|+|||+|
T Consensus         4 ~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vih~A   83 (349)
T TIGR02622         4 GKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAKLRKAIAEFKPEIVFHLA   83 (349)
T ss_pred             CCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHHHHHHHhhcCCCEEEECC
Confidence            47899999999999999999999999999999986542111    1123678899999999999999985  59999999


Q ss_pred             ccCC------CcchhhhhhhHHHHHHHHHHHHcC-CCEEEEEecC-CcCCC-----------CccccchHHHHHHHHHHH
Q 023205          130 GGFG------SNSYMYKINGTANINAIRAASEKG-VKRFVYISAA-DFGVA-----------NYLLQGYYEGKRAAETEL  190 (286)
Q Consensus       130 ~~~~------~~~~~~~~~~~~~~~l~~~a~~~~-v~~~v~~Ss~-~~~~~-----------~~~~~~y~~sK~~~E~~~  190 (286)
                      +...      ++...+++|+.++.++++++++.+ +++||++||. .|+..           ..|.+.|+.+|..+|.++
T Consensus        84 ~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~  163 (349)
T TIGR02622        84 AQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNVTSDKCYRNDEWVWGYRETDPLGGHDPYSSSKACAELVI  163 (349)
T ss_pred             cccccccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEechhhhCCCCCCCCCccCCCCCCCCcchhHHHHHHHHH
Confidence            8532      234567899999999999998876 7899999994 45421           134678999999999988


Q ss_pred             HH---h-------CCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCC-CCccCCCccHHHHHHHH
Q 023205          191 LT---R-------YPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLV-GPLFTPPVNVTVVAKVA  259 (286)
Q Consensus       191 ~~---~-------~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~i~v~Dva~~~  259 (286)
                      +.   .       .+++++++||+.+|||+....        ..++..+.+.......+++. |+..++|+|++|+++++
T Consensus       164 ~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~--------~~~~~~~~~~~~~g~~~~~~~g~~~rd~i~v~D~a~a~  235 (349)
T TIGR02622       164 ASYRSSFFGVANFHGIKIASARAGNVIGGGDWAE--------DRLIPDVIRAFSSNKIVIIRNPDATRPWQHVLEPLSGY  235 (349)
T ss_pred             HHHHHHhhcccccCCCcEEEEccCcccCCCcchh--------hhhhHHHHHHHhcCCCeEECCCCcccceeeHHHHHHHH
Confidence            54   1       389999999999999864211        12334455554444455543 55689999999999999


Q ss_pred             HHHhcCC----CCCCCeeEeccc
Q 023205          260 VRAATDP----VFPPGIVDVHGI  278 (286)
Q Consensus       260 ~~~l~~~----~~~~~~~~l~~~  278 (286)
                      +.+++..    ...+++||+++.
T Consensus       236 ~~~~~~~~~~~~~~~~~yni~s~  258 (349)
T TIGR02622       236 LLLAEKLFTGQAEFAGAWNFGPR  258 (349)
T ss_pred             HHHHHHHhhcCccccceeeeCCC
Confidence            9887642    123579999863

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=99.97  E-value=6.4e-29  Score=213.31  Aligned_cols=201  Identities=19%  Similarity=0.206  Sum_probs=154.7

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhc--CCCEEEEccccCCC
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD--GVTAVISCVGGFGS  134 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~--~~d~vi~~a~~~~~  134 (286)
                      |+||||||+||||++++++|+++| +|++++|...            .+.+|++|.+.+.++++  ++|+|||||+....
T Consensus         1 m~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~------------~~~~Dl~d~~~~~~~~~~~~~D~Vih~Aa~~~~   67 (299)
T PRK09987          1 MNILLFGKTGQVGWELQRALAPLG-NLIALDVHST------------DYCGDFSNPEGVAETVRKIRPDVIVNAAAHTAV   67 (299)
T ss_pred             CeEEEECCCCHHHHHHHHHhhccC-CEEEeccccc------------cccCCCCCHHHHHHHHHhcCCCEEEECCccCCc
Confidence            479999999999999999999999 7999988632            34689999999999998  48999999987642


Q ss_pred             ------cchhhhhhhHHHHHHHHHHHHcCCCEEEEEecC-CcCCC----------CccccchHHHHHHHHHHHHHhCCCc
Q 023205          135 ------NSYMYKINGTANINAIRAASEKGVKRFVYISAA-DFGVA----------NYLLQGYYEGKRAAETELLTRYPYG  197 (286)
Q Consensus       135 ------~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~-~~~~~----------~~~~~~y~~sK~~~E~~~~~~~g~~  197 (286)
                            +...+++|+.++.+++++|++.++ +|||+||. +|+..          ..|.+.|+.+|..+|++++. ...+
T Consensus        68 ~~~~~~~~~~~~~N~~~~~~l~~aa~~~g~-~~v~~Ss~~Vy~~~~~~p~~E~~~~~P~~~Yg~sK~~~E~~~~~-~~~~  145 (299)
T PRK09987         68 DKAESEPEFAQLLNATSVEAIAKAANEVGA-WVVHYSTDYVFPGTGDIPWQETDATAPLNVYGETKLAGEKALQE-HCAK  145 (299)
T ss_pred             chhhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEccceEECCCCCCCcCCCCCCCCCCHHHHHHHHHHHHHHH-hCCC
Confidence                  234567999999999999999996 79999994 44321          13567899999999998876 4458


Q ss_pred             EEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCcc----CCCccHHHHHHHHHHHhcCCCCCCCee
Q 023205          198 GVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLF----TPPVNVTVVAKVAVRAATDPVFPPGIV  273 (286)
Q Consensus       198 ~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~----~~~i~v~Dva~~~~~~l~~~~~~~~~~  273 (286)
                      ++++|++++|||...           .++..+.+......++++.++..    ..+...||+++++..++..+.. +++|
T Consensus       146 ~~ilR~~~vyGp~~~-----------~~~~~~~~~~~~~~~~~v~~d~~g~~~~~~~~~d~~~~~~~~~~~~~~~-~giy  213 (299)
T PRK09987        146 HLIFRTSWVYAGKGN-----------NFAKTMLRLAKEREELSVINDQFGAPTGAELLADCTAHAIRVALNKPEV-AGLY  213 (299)
T ss_pred             EEEEecceecCCCCC-----------CHHHHHHHHHhcCCCeEEeCCCcCCCCCHHHHHHHHHHHHHHhhccCCC-CCeE
Confidence            899999999998642           24455555555556666666533    2344566677777776655433 4699


Q ss_pred             Eeccccccccc
Q 023205          274 DVHGILRYSQK  284 (286)
Q Consensus       274 ~l~~~~~~s~~  284 (286)
                      |+++++.+||.
T Consensus       214 ni~~~~~~s~~  224 (299)
T PRK09987        214 HLVASGTTTWH  224 (299)
T ss_pred             EeeCCCCccHH
Confidence            99999998875

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=99.97  E-value=1.4e-28  Score=216.21  Aligned_cols=220  Identities=16%  Similarity=0.184  Sum_probs=157.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc--cc--cCCceeEEeccCCCHhHHHHHhcCCCEEEEcccc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DS--WANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG  131 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~--~~--~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~  131 (286)
                      .|+||||||+||||++++++|+++|++|++++|+..+...  ..  ...+++++.+|+.|.+.+.++++++|+|||+|+.
T Consensus        10 ~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~A~~   89 (353)
T PLN02896         10 TGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFDEAVKGCDGVFHVAAS   89 (353)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCHHHHHHHHcCCCEEEECCcc
Confidence            5789999999999999999999999999999997543211  00  1246889999999999999999999999999987


Q ss_pred             CCCc--------ch-----hhhhhhHHHHHHHHHHHHcC-CCEEEEEec-CCcCCC-----------C---c--------
Q 023205          132 FGSN--------SY-----MYKINGTANINAIRAASEKG-VKRFVYISA-ADFGVA-----------N---Y--------  174 (286)
Q Consensus       132 ~~~~--------~~-----~~~~~~~~~~~l~~~a~~~~-v~~~v~~Ss-~~~~~~-----------~---~--------  174 (286)
                      ....        ..     .++.|+.++.+++++|++.+ +++||++|| .+|+..           +   .        
T Consensus        90 ~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~~~E~~~~p~~~~~~~  169 (353)
T PLN02896         90 MEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFTSSISTLTAKDSNGRWRAVVDETCQTPIDHVWNT  169 (353)
T ss_pred             ccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEEEechhhccccccCCCCCCccCcccCCcHHHhhcc
Confidence            5321        11     22345689999999998875 889999999 455421           0   0        


Q ss_pred             --cccchHHHHHHHHHHHHH---hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhccc-CCCCCCCC-----
Q 023205          175 --LLQGYYEGKRAAETELLT---RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKP-LSQLPLVG-----  243 (286)
Q Consensus       175 --~~~~y~~sK~~~E~~~~~---~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g-----  243 (286)
                        +..+|+.+|..+|+++++   ..+++++++||+.+|||...+.+       ......+...... ....+..+     
T Consensus       170 ~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~-------~~~~~~~~~~~~g~~~~~~~~~~~~~~  242 (353)
T PLN02896        170 KASGWVYVLSKLLTEEAAFKYAKENGIDLVSVITTTVAGPFLTPSV-------PSSIQVLLSPITGDSKLFSILSAVNSR  242 (353)
T ss_pred             CCCCccHHHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCcCCCC-------CchHHHHHHHhcCCccccccccccccc
Confidence              113799999999998865   47999999999999999764321       2222222221111 11122211     


Q ss_pred             CccCCCccHHHHHHHHHHHhcCCCCCCCeeEeccccccccc
Q 023205          244 PLFTPPVNVTVVAKVAVRAATDPVFPPGIVDVHGILRYSQK  284 (286)
Q Consensus       244 ~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~l~~~~~~s~~  284 (286)
                      .+.++|||++|+|++++.+++.+.. +..|+++ ...++.+
T Consensus       243 ~~~~dfi~v~Dva~a~~~~l~~~~~-~~~~~~~-~~~~s~~  281 (353)
T PLN02896        243 MGSIALVHIEDICDAHIFLMEQTKA-EGRYICC-VDSYDMS  281 (353)
T ss_pred             cCceeEEeHHHHHHHHHHHHhCCCc-CccEEec-CCCCCHH
Confidence            1135899999999999999986544 4567654 4455543

>PLN02996 fatty acyl-CoA reductase

Probab=99.96  E-value=7.9e-29  Score=225.00  Aligned_cols=225  Identities=17%  Similarity=0.101  Sum_probs=165.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCC---CeEEEEecCCCcccc------c------------c--------cCCceeEEe
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRG---LTVASLSRSGRSSLR------D------------S--------WANNVIWHQ  106 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g---~~V~~l~R~~~~~~~------~------------~--------~~~~~~~i~  106 (286)
                      .++|+|||||||+|+++++.|++.+   .+|+++.|..+....      +            .        ...+++++.
T Consensus        11 ~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~i~   90 (491)
T PLN02996         11 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTPVP   90 (491)
T ss_pred             CCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEEEe
Confidence            5789999999999999999999864   378999997653210      0            0        015799999


Q ss_pred             ccCC-------CHhHHHHHhcCCCEEEEccccCCC---cchhhhhhhHHHHHHHHHHHHc-CCCEEEEEecC-CcCCCC-
Q 023205          107 GNLL-------SSDSWKEALDGVTAVISCVGGFGS---NSYMYKINGTANINAIRAASEK-GVKRFVYISAA-DFGVAN-  173 (286)
Q Consensus       107 ~Dl~-------d~~~~~~~~~~~d~vi~~a~~~~~---~~~~~~~~~~~~~~l~~~a~~~-~v~~~v~~Ss~-~~~~~~-  173 (286)
                      +|++       +.+.++.+++++|+|||+|+..+.   .....++|+.++.+++++|++. ++++||++||+ +||... 
T Consensus        91 GDl~~~~LGLs~~~~~~~l~~~vD~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~k~~V~vST~~vyG~~~~  170 (491)
T PLN02996         91 GDISYDDLGVKDSNLREEMWKEIDIVVNLAATTNFDERYDVALGINTLGALNVLNFAKKCVKVKMLLHVSTAYVCGEKSG  170 (491)
T ss_pred             cccCCcCCCCChHHHHHHHHhCCCEEEECccccCCcCCHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeeEEecCCCc
Confidence            9998       445577888999999999997653   3456789999999999999985 78999999994 444311 


Q ss_pred             ------------------------------------------------------------ccccchHHHHHHHHHHHHH-
Q 023205          174 ------------------------------------------------------------YLLQGYYEGKRAAETELLT-  192 (286)
Q Consensus       174 ------------------------------------------------------------~~~~~y~~sK~~~E~~~~~-  192 (286)
                                                                                  ...+.|+.+|..+|+++.+ 
T Consensus       171 ~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pn~Y~~TK~~aE~lv~~~  250 (491)
T PLN02996        171 LILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHGWPNTYVFTKAMGEMLLGNF  250 (491)
T ss_pred             eeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCCCCCchHhhHHHHHHHHHHh
Confidence                                                                        0235699999999998876 


Q ss_pred             hCCCcEEEEeeCeeecCCCCCccccCccccCch--HHHHHHhcccCCC--CCCCCCccCCCccHHHHHHHHHHHhcCC--
Q 023205          193 RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSP--MEMVLQHAKPLSQ--LPLVGPLFTPPVNVTVVAKVAVRAATDP--  266 (286)
Q Consensus       193 ~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~--~~~~g~~~~~~i~v~Dva~~~~~~l~~~--  266 (286)
                      ..+++++++||++++|+...+.    .+|+..+  ...+.........  +...|+...+++++||++++++.++...  
T Consensus       251 ~~~lpv~i~RP~~V~G~~~~p~----~gwi~~~~~~~~i~~~~~~g~~~~~~gdg~~~~D~v~Vddvv~a~l~a~~~~~~  326 (491)
T PLN02996        251 KENLPLVIIRPTMITSTYKEPF----PGWIEGLRTIDSVIVGYGKGKLTCFLADPNSVLDVIPADMVVNAMIVAMAAHAG  326 (491)
T ss_pred             cCCCCEEEECCCEeccCCcCCC----CCcccchhhHHHHHHHhccceEeEEecCCCeecceecccHHHHHHHHHHHHhhc
Confidence            3589999999999999986442    1222221  1122222222222  2344556899999999999999998753  


Q ss_pred             C-CCCCeeEeccc--cccccc
Q 023205          267 V-FPPGIVDVHGI--LRYSQK  284 (286)
Q Consensus       267 ~-~~~~~~~l~~~--~~~s~~  284 (286)
                      . ..+++||+++.  .+++|.
T Consensus       327 ~~~~~~vYNi~s~~~~~~s~~  347 (491)
T PLN02996        327 GQGSEIIYHVGSSLKNPVKFS  347 (491)
T ss_pred             cCCCCcEEEecCCCCCcccHH
Confidence            1 23679999987  778875

>PLN02583 cinnamoyl-CoA reductase

Probab=99.96  E-value=2.5e-28  Score=209.48  Aligned_cols=210  Identities=17%  Similarity=0.194  Sum_probs=159.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCccc-----ccc--cCCceeEEeccCCCHhHHHHHhcCCCEEEEc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSL-----RDS--WANNVIWHQGNLLSSDSWKEALDGVTAVISC  128 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~-----~~~--~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~  128 (286)
                      .++|+||||+||||++++++|+++|++|++++|+.++..     ...  ...+++++++|++|.+.+.+++.++|.|+|+
T Consensus         6 ~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l~~~d~v~~~   85 (297)
T PLN02583          6 SKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDALKGCSGLFCC   85 (297)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhcccCCCceEEEEecCCCHHHHHHHHcCCCEEEEe
Confidence            568999999999999999999999999999999643211     111  1246889999999999999999999999998


Q ss_pred             cccCCC----cchhhhhhhHHHHHHHHHHHHc-CCCEEEEEecCC---cCCCC---------c----c------ccchHH
Q 023205          129 VGGFGS----NSYMYKINGTANINAIRAASEK-GVKRFVYISAAD---FGVAN---------Y----L------LQGYYE  181 (286)
Q Consensus       129 a~~~~~----~~~~~~~~~~~~~~l~~~a~~~-~v~~~v~~Ss~~---~~~~~---------~----~------~~~y~~  181 (286)
                      +++...    ....+++|+.++.+++++|.+. ++++||++||..   ++...         .    +      ...|+.
T Consensus        86 ~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~riV~~SS~~a~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~  165 (297)
T PLN02583         86 FDPPSDYPSYDEKMVDVEVRAAHNVLEACAQTDTIEKVVFTSSLTAVIWRDDNISTQKDVDERSWSDQNFCRKFKLWHAL  165 (297)
T ss_pred             CccCCcccccHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecchHheecccccCCCCCCCCcccCCCHHHHhhcccHHHH
Confidence            765432    2467899999999999999886 589999999942   23110         0    0      116999


Q ss_pred             HHHHHHHHHHH---hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHH
Q 023205          182 GKRAAETELLT---RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKV  258 (286)
Q Consensus       182 sK~~~E~~~~~---~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~  258 (286)
                      +|..+|+++++   ..|++++++||+.+|||......           ..+    .  +..+..+++..++|+++|+|++
T Consensus       166 sK~~aE~~~~~~~~~~gi~~v~lrp~~v~Gp~~~~~~-----------~~~----~--~~~~~~~~~~~~~v~V~Dva~a  228 (297)
T PLN02583        166 AKTLSEKTAWALAMDRGVNMVSINAGLLMGPSLTQHN-----------PYL----K--GAAQMYENGVLVTVDVNFLVDA  228 (297)
T ss_pred             HHHHHHHHHHHHHHHhCCcEEEEcCCcccCCCCCCch-----------hhh----c--CCcccCcccCcceEEHHHHHHH
Confidence            99999998864   46899999999999999753210           000    0  1112223445689999999999


Q ss_pred             HHHHhcCCCCCCCeeEecccccccc
Q 023205          259 AVRAATDPVFPPGIVDVHGILRYSQ  283 (286)
Q Consensus       259 ~~~~l~~~~~~~~~~~l~~~~~~s~  283 (286)
                      ++.+++.+... +.|.+.++....|
T Consensus       229 ~~~al~~~~~~-~r~~~~~~~~~~~  252 (297)
T PLN02583        229 HIRAFEDVSSY-GRYLCFNHIVNTE  252 (297)
T ss_pred             HHHHhcCcccC-CcEEEecCCCccH
Confidence            99999987764 4788888765444

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=99.96  E-value=1.4e-28  Score=203.29  Aligned_cols=196  Identities=22%  Similarity=0.260  Sum_probs=170.2

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcC--CCEEEEccccCC-
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDG--VTAVISCVGGFG-  133 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~--~d~vi~~a~~~~-  133 (286)
                      |+|||||++|++|.+|++.|. .+++|++++|..                .|++|++.+.++++.  .|+|||+|+... 
T Consensus         1 M~iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~----------------~Ditd~~~v~~~i~~~~PDvVIn~AAyt~v   63 (281)
T COG1091           1 MKILITGANGQLGTELRRALP-GEFEVIATDRAE----------------LDITDPDAVLEVIRETRPDVVINAAAYTAV   63 (281)
T ss_pred             CcEEEEcCCChHHHHHHHHhC-CCceEEeccCcc----------------ccccChHHHHHHHHhhCCCEEEECcccccc
Confidence            349999999999999999998 668999999883                799999999999985  599999999874 


Q ss_pred             -----CcchhhhhhhHHHHHHHHHHHHcCCCEEEEEecC-C--------cC--CCCccccchHHHHHHHHHHHHHhCCCc
Q 023205          134 -----SNSYMYKINGTANINAIRAASEKGVKRFVYISAA-D--------FG--VANYLLQGYYEGKRAAETELLTRYPYG  197 (286)
Q Consensus       134 -----~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~-~--------~~--~~~~~~~~y~~sK~~~E~~~~~~~g~~  197 (286)
                           .+...+.+|..++.|++++|++.|. ++||+||- +        |.  +...|.+.||+||+.+|..+++ .+-+
T Consensus        64 D~aE~~~e~A~~vNa~~~~~lA~aa~~~ga-~lVhiSTDyVFDG~~~~~Y~E~D~~~P~nvYG~sKl~GE~~v~~-~~~~  141 (281)
T COG1091          64 DKAESEPELAFAVNATGAENLARAAAEVGA-RLVHISTDYVFDGEKGGPYKETDTPNPLNVYGRSKLAGEEAVRA-AGPR  141 (281)
T ss_pred             ccccCCHHHHHHhHHHHHHHHHHHHHHhCC-eEEEeecceEecCCCCCCCCCCCCCCChhhhhHHHHHHHHHHHH-hCCC
Confidence                 3356788999999999999999998 79999982 1        11  2235788999999999998877 5569


Q ss_pred             EEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcCCCCCCCeeEecc
Q 023205          198 GVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDPVFPPGIVDVHG  277 (286)
Q Consensus       198 ~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~l~~  277 (286)
                      ..|+|.+++||...           +++...+.+..+....+.+..|+..++++..|+|+++.+++..... +++||++|
T Consensus       142 ~~I~Rtswv~g~~g-----------~nFv~tml~la~~~~~l~vv~Dq~gsPt~~~dlA~~i~~ll~~~~~-~~~yH~~~  209 (281)
T COG1091         142 HLILRTSWVYGEYG-----------NNFVKTMLRLAKEGKELKVVDDQYGSPTYTEDLADAILELLEKEKE-GGVYHLVN  209 (281)
T ss_pred             EEEEEeeeeecCCC-----------CCHHHHHHHHhhcCCceEEECCeeeCCccHHHHHHHHHHHHhcccc-CcEEEEeC
Confidence            99999999999875           4688899999999999998889999999999999999999987665 55999999


Q ss_pred             cccccc
Q 023205          278 ILRYSQ  283 (286)
Q Consensus       278 ~~~~s~  283 (286)
                      ...+||
T Consensus       210 ~g~~Sw  215 (281)
T COG1091         210 SGECSW  215 (281)
T ss_pred             CCcccH
Confidence            999988

>TIGR01746 Thioester-redct thioester reductase domain

Probab=99.96  E-value=1.2e-28  Score=217.42  Aligned_cols=223  Identities=21%  Similarity=0.257  Sum_probs=166.0

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCC--CeEEEEecCCCccc-----cc----------ccC-CceeEEeccCCCH------h
Q 023205           58 KLLVLGGNGFVGSHICREALDRG--LTVASLSRSGRSSL-----RD----------SWA-NNVIWHQGNLLSS------D  113 (286)
Q Consensus        58 ~VlVtGatG~iG~~l~~~Ll~~g--~~V~~l~R~~~~~~-----~~----------~~~-~~~~~i~~Dl~d~------~  113 (286)
                      +|+|||||||+|++++++|+++|  ++|+|++|+.+...     .+          ... .+++++.+|++++      +
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~   80 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA   80 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence            58999999999999999999998  67999999865310     00          001 5799999999753      5


Q ss_pred             HHHHHhcCCCEEEEccccCCC---cchhhhhhhHHHHHHHHHHHHcCCCEEEEEecC-CcCCCC---------------c
Q 023205          114 SWKEALDGVTAVISCVGGFGS---NSYMYKINGTANINAIRAASEKGVKRFVYISAA-DFGVAN---------------Y  174 (286)
Q Consensus       114 ~~~~~~~~~d~vi~~a~~~~~---~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~-~~~~~~---------------~  174 (286)
                      .+..+.+++|+|||+|+..+.   .....+.|+.++.+++++|.+.++++|+++||. .++...               .
T Consensus        81 ~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~nv~g~~~ll~~a~~~~~~~~v~iSS~~v~~~~~~~~~~~~~~~~~~~~~  160 (367)
T TIGR01746        81 EWERLAENVDTIVHNGALVNWVYPYSELRAANVLGTREVLRLAASGRAKPLHYVSTISVLAAIDLSTVTEDDAIVTPPPG  160 (367)
T ss_pred             HHHHHHhhCCEEEeCCcEeccCCcHHHHhhhhhHHHHHHHHHHhhCCCceEEEEccccccCCcCCCCccccccccccccc
Confidence            677778899999999997653   234567999999999999999999899999995 333210               1


Q ss_pred             cccchHHHHHHHHHHHHH--hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccH
Q 023205          175 LLQGYYEGKRAAETELLT--RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNV  252 (286)
Q Consensus       175 ~~~~y~~sK~~~E~~~~~--~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v  252 (286)
                      +.++|+++|+.+|.++.+  ..|++++++|||.++|+...+.+..     ...+..+.......+.+|.......+|+++
T Consensus       161 ~~~~Y~~sK~~~E~~~~~~~~~g~~~~i~Rpg~v~G~~~~g~~~~-----~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v  235 (367)
T TIGR01746       161 LAGGYAQSKWVAELLVREASDRGLPVTIVRPGRILGNSYTGAINS-----SDILWRMVKGCLALGAYPDSPELTEDLTPV  235 (367)
T ss_pred             cCCChHHHHHHHHHHHHHHHhcCCCEEEECCCceeecCCCCCCCc-----hhHHHHHHHHHHHhCCCCCCCccccCcccH
Confidence            235799999999998875  3589999999999999854433211     122222333333334445433336789999


Q ss_pred             HHHHHHHHHHhcCCCC--CCCeeEecccccccccC
Q 023205          253 TVVAKVAVRAATDPVF--PPGIVDVHGILRYSQKS  285 (286)
Q Consensus       253 ~Dva~~~~~~l~~~~~--~~~~~~l~~~~~~s~~~  285 (286)
                      +|+|++++.++..+..  .+++||+.+|+.++|+.
T Consensus       236 ddva~ai~~~~~~~~~~~~~~~~~v~~~~~~s~~e  270 (367)
T TIGR01746       236 DYVARAIVALSSQPAASAGGPVFHVVNPEPVSLDE  270 (367)
T ss_pred             HHHHHHHHHHHhCCCcccCCceEEecCCCCCCHHH
Confidence            9999999999877653  27899999999988853

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>PLN00016 RNA-binding protein; Provisional

Probab=99.96  E-value=8.1e-29  Score=219.44  Aligned_cols=208  Identities=19%  Similarity=0.226  Sum_probs=156.5

Q ss_pred             CCCCCCeEEEE----cCCChhHHHHHHHHHHCCCeEEEEecCCCcccc----------cccCCceeEEeccCCCHhHHHH
Q 023205           52 PPPPSEKLLVL----GGNGFVGSHICREALDRGLTVASLSRSGRSSLR----------DSWANNVIWHQGNLLSSDSWKE  117 (286)
Q Consensus        52 ~~~~~~~VlVt----GatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~----------~~~~~~~~~i~~Dl~d~~~~~~  117 (286)
                      ...++++||||    |||||||++|+++|+++||+|++++|+......          +....+++++.+|+.|   +..
T Consensus        48 ~~~~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d---~~~  124 (378)
T PLN00016         48 AAVEKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVWGDPAD---VKS  124 (378)
T ss_pred             cccccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhhcCceEEEecHHH---HHh
Confidence            34456799999    999999999999999999999999998654211          1112368999999876   444


Q ss_pred             Hh--cCCCEEEEccccCCCcchhhhhhhHHHHHHHHHHHHcCCCEEEEEecC-CcCCCCc-------cccchHHHHHHHH
Q 023205          118 AL--DGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAA-DFGVANY-------LLQGYYEGKRAAE  187 (286)
Q Consensus       118 ~~--~~~d~vi~~a~~~~~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~-~~~~~~~-------~~~~y~~sK~~~E  187 (286)
                      ++  .++|+|||+++.          +..++.+++++|++.|+++|||+||. +|+....       +..++. +|..+|
T Consensus       125 ~~~~~~~d~Vi~~~~~----------~~~~~~~ll~aa~~~gvkr~V~~SS~~vyg~~~~~p~~E~~~~~p~~-sK~~~E  193 (378)
T PLN00016        125 KVAGAGFDVVYDNNGK----------DLDEVEPVADWAKSPGLKQFLFCSSAGVYKKSDEPPHVEGDAVKPKA-GHLEVE  193 (378)
T ss_pred             hhccCCccEEEeCCCC----------CHHHHHHHHHHHHHcCCCEEEEEccHhhcCCCCCCCCCCCCcCCCcc-hHHHHH
Confidence            44  479999999753          23467889999999999999999995 4554321       112233 899999


Q ss_pred             HHHHHhCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCC--CCccCCCccHHHHHHHHHHHhcC
Q 023205          188 TELLTRYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLV--GPLFTPPVNVTVVAKVAVRAATD  265 (286)
Q Consensus       188 ~~~~~~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~i~v~Dva~~~~~~l~~  265 (286)
                      .++.+ .+++++++||+.+||+.....          ...++........++++.  |+..++++|++|+|++++.++.+
T Consensus       194 ~~l~~-~~l~~~ilRp~~vyG~~~~~~----------~~~~~~~~~~~~~~i~~~g~g~~~~~~i~v~Dva~ai~~~l~~  262 (378)
T PLN00016        194 AYLQK-LGVNWTSFRPQYIYGPGNNKD----------CEEWFFDRLVRGRPVPIPGSGIQLTQLGHVKDLASMFALVVGN  262 (378)
T ss_pred             HHHHH-cCCCeEEEeceeEECCCCCCc----------hHHHHHHHHHcCCceeecCCCCeeeceecHHHHHHHHHHHhcC
Confidence            98765 789999999999999975321          233344334444455543  45578999999999999999998


Q ss_pred             CCCCCCeeEeccccccccc
Q 023205          266 PVFPPGIVDVHGILRYSQK  284 (286)
Q Consensus       266 ~~~~~~~~~l~~~~~~s~~  284 (286)
                      +...+++||+++++.+++.
T Consensus       263 ~~~~~~~yni~~~~~~s~~  281 (378)
T PLN00016        263 PKAAGQIFNIVSDRAVTFD  281 (378)
T ss_pred             ccccCCEEEecCCCccCHH
Confidence            7666899999999988875

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.96  E-value=6.6e-29  Score=235.16  Aligned_cols=227  Identities=20%  Similarity=0.120  Sum_probs=166.8

Q ss_pred             CeEEEEcCCChhHHHHHHHHH--HCCCeEEEEecCCCcccc-c---c-cCCceeEEeccCCCH------hHHHHHhcCCC
Q 023205           57 EKLLVLGGNGFVGSHICREAL--DRGLTVASLSRSGRSSLR-D---S-WANNVIWHQGNLLSS------DSWKEALDGVT  123 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll--~~g~~V~~l~R~~~~~~~-~---~-~~~~~~~i~~Dl~d~------~~~~~~~~~~d  123 (286)
                      |+|||||||||||++|+++|+  +.|++|++++|+...... .   . ...+++++.+|+.|+      +.+.++ +++|
T Consensus         1 m~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l-~~~D   79 (657)
T PRK07201          1 MRYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSLSRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAEL-GDID   79 (657)
T ss_pred             CeEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchHHHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHh-cCCC
Confidence            489999999999999999999  478999999996533111 0   1 125799999999984      455555 8999


Q ss_pred             EEEEccccCCC---cchhhhhhhHHHHHHHHHHHHcCCCEEEEEecC-CcCCCC------------ccccchHHHHHHHH
Q 023205          124 AVISCVGGFGS---NSYMYKINGTANINAIRAASEKGVKRFVYISAA-DFGVAN------------YLLQGYYEGKRAAE  187 (286)
Q Consensus       124 ~vi~~a~~~~~---~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~-~~~~~~------------~~~~~y~~sK~~~E  187 (286)
                      +|||||+..+.   .....++|+.++.+++++|++.++++|||+||. +|+...            .+.+.|+.+|+.+|
T Consensus        80 ~Vih~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~~SS~~v~g~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E  159 (657)
T PRK07201         80 HVVHLAAIYDLTADEEAQRAANVDGTRNVVELAERLQAATFHHVSSIAVAGDYEGVFREDDFDEGQGLPTPYHRTKFEAE  159 (657)
T ss_pred             EEEECceeecCCCCHHHHHHHHhHHHHHHHHHHHhcCCCeEEEEeccccccCccCccccccchhhcCCCCchHHHHHHHH
Confidence            99999987542   335668999999999999999999999999994 343221            12467999999999


Q ss_pred             HHHHHhCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCC--CCCCccCCCccHHHHHHHHHHHhcC
Q 023205          188 TELLTRYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLP--LVGPLFTPPVNVTVVAKVAVRAATD  265 (286)
Q Consensus       188 ~~~~~~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~~~~~~i~v~Dva~~~~~~l~~  265 (286)
                      +++.+..|++++++||+.+||+...+......+ ...+...+.........++  ..+....++++++|+++++..+++.
T Consensus       160 ~~~~~~~g~~~~ilRp~~v~G~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~vddva~ai~~~~~~  238 (657)
T PRK07201        160 KLVREECGLPWRVYRPAVVVGDSRTGEMDKIDG-PYYFFKVLAKLAKLPSWLPMVGPDGGRTNIVPVDYVADALDHLMHK  238 (657)
T ss_pred             HHHHHcCCCcEEEEcCCeeeecCCCCccccCCc-HHHHHHHHHHhccCCcccccccCCCCeeeeeeHHHHHHHHHHHhcC
Confidence            999877899999999999999875433211000 0001122222211111222  2234567899999999999999987


Q ss_pred             CCCCCCeeEecccccccccC
Q 023205          266 PVFPPGIVDVHGILRYSQKS  285 (286)
Q Consensus       266 ~~~~~~~~~l~~~~~~s~~~  285 (286)
                      +...+++||+++++.++|++
T Consensus       239 ~~~~g~~~ni~~~~~~s~~e  258 (657)
T PRK07201        239 DGRDGQTFHLTDPKPQRVGD  258 (657)
T ss_pred             cCCCCCEEEeCCCCCCcHHH
Confidence            76668999999999988753

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=99.96  E-value=3.5e-28  Score=212.50  Aligned_cols=228  Identities=22%  Similarity=0.224  Sum_probs=166.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc------cccCCceeEEeccCCCHhHHHHHhc--CCCEEEEc
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD--GVTAVISC  128 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~------~~~~~~~~~i~~Dl~d~~~~~~~~~--~~d~vi~~  128 (286)
                      |+|+||||+||||+++++.|+++|++|++++|.......      .....++.++.+|++|.+.+.++++  ++|+|||+
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vvh~   80 (338)
T PRK10675          1 MRVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHDHAIDTVIHF   80 (338)
T ss_pred             CeEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhcCCCCEEEEC
Confidence            579999999999999999999999999999875332111      1112357889999999999998886  58999999


Q ss_pred             cccCC------CcchhhhhhhHHHHHHHHHHHHcCCCEEEEEecC-CcCCC-----------CccccchHHHHHHHHHHH
Q 023205          129 VGGFG------SNSYMYKINGTANINAIRAASEKGVKRFVYISAA-DFGVA-----------NYLLQGYYEGKRAAETEL  190 (286)
Q Consensus       129 a~~~~------~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~-~~~~~-----------~~~~~~y~~sK~~~E~~~  190 (286)
                      |+...      .....++.|+.++.+++++|++.++++||++||. .|+..           ..+...|+.+|..+|+++
T Consensus        81 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~yg~~~~~~~~E~~~~~~p~~~Y~~sK~~~E~~~  160 (338)
T PRK10675         81 AGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNLIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQIL  160 (338)
T ss_pred             CccccccchhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhhCCCCCCccccccCCCCCCChhHHHHHHHHHHH
Confidence            98643      1235678899999999999999999999999994 45422           135678999999999988


Q ss_pred             HH----hCCCcEEEEeeCeeecCCCCCccccC-ccccCchHHHHHHhcccC-CCC-------CC-CCCccCCCccHHHHH
Q 023205          191 LT----RYPYGGVILRPGFIYGTRTVGGMKLP-LGVIGSPMEMVLQHAKPL-SQL-------PL-VGPLFTPPVNVTVVA  256 (286)
Q Consensus       191 ~~----~~g~~~~ilRp~~v~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~-------~~-~g~~~~~~i~v~Dva  256 (286)
                      +.    ..+++++++|++.+||+...+.+... ......+..++.+..... ..+       +. .|...++|+|++|+|
T Consensus       161 ~~~~~~~~~~~~~ilR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~D~a  240 (338)
T PRK10675        161 TDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDLA  240 (338)
T ss_pred             HHHHHhcCCCcEEEEEeeeecCCCcccccccCCCCChhHHHHHHHHHHhcCCCceEEeCCcCCCCCCcEEEeeEEHHHHH
Confidence            74    24789999999999998643222110 001122333443333221 122       21 245578999999999


Q ss_pred             HHHHHHhcCC--CCCCCeeEeccccccccc
Q 023205          257 KVAVRAATDP--VFPPGIVDVHGILRYSQK  284 (286)
Q Consensus       257 ~~~~~~l~~~--~~~~~~~~l~~~~~~s~~  284 (286)
                      ++++.+++..  ...+++||+++++.++++
T Consensus       241 ~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~  270 (338)
T PRK10675        241 DGHVAAMEKLANKPGVHIYNLGAGVGSSVL  270 (338)
T ss_pred             HHHHHHHHhhhccCCCceEEecCCCceeHH
Confidence            9999998752  233579999999988875

>PLN02240 UDP-glucose 4-epimerase

Probab=99.96  E-value=4e-28  Score=213.30  Aligned_cols=231  Identities=22%  Similarity=0.244  Sum_probs=168.2

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCccc------cc---ccCCceeEEeccCCCHhHHHHHhc--CCC
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSL------RD---SWANNVIWHQGNLLSSDSWKEALD--GVT  123 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~------~~---~~~~~~~~i~~Dl~d~~~~~~~~~--~~d  123 (286)
                      ++++|+||||||++|++++++|+++|++|++++|......      ..   ....+++++.+|+.|++.+.++++  ++|
T Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~d   83 (352)
T PLN02240          4 MGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFASTRFD   83 (352)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhCCCC
Confidence            3578999999999999999999999999999987543210      00   112468899999999999999886  689


Q ss_pred             EEEEccccCC------CcchhhhhhhHHHHHHHHHHHHcCCCEEEEEecC-CcCCCC----------ccccchHHHHHHH
Q 023205          124 AVISCVGGFG------SNSYMYKINGTANINAIRAASEKGVKRFVYISAA-DFGVAN----------YLLQGYYEGKRAA  186 (286)
Q Consensus       124 ~vi~~a~~~~------~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~-~~~~~~----------~~~~~y~~sK~~~  186 (286)
                      +|||+|+...      .+...++.|+.++.+++++|++.++++||++||. .|+...          .+.+.|+.+|..+
T Consensus        84 ~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~  163 (352)
T PLN02240         84 AVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKHGCKKLVFSSSATVYGQPEEVPCTEEFPLSATNPYGRTKLFI  163 (352)
T ss_pred             EEEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCCCCCCCCCCCCCCCCCHHHHHHHHH
Confidence            9999998642      2235678999999999999999999999999995 354321          2457899999999


Q ss_pred             HHHHHH----hCCCcEEEEeeCeeecCCCCCcccc-CccccCchHHHHHHhccc-CCCCCC--------CCCccCCCccH
Q 023205          187 ETELLT----RYPYGGVILRPGFIYGTRTVGGMKL-PLGVIGSPMEMVLQHAKP-LSQLPL--------VGPLFTPPVNV  252 (286)
Q Consensus       187 E~~~~~----~~g~~~~ilRp~~v~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~--------~g~~~~~~i~v  252 (286)
                      |++++.    ..+++++++|++.+||+.....+.. +......+..++...... ...++.        .|...++||++
T Consensus       164 e~~~~~~~~~~~~~~~~~~R~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v  243 (352)
T PLN02240        164 EEICRDIHASDPEWKIILLRYFNPVGAHPSGRIGEDPKGIPNNLMPYVQQVAVGRRPELTVFGNDYPTKDGTGVRDYIHV  243 (352)
T ss_pred             HHHHHHHHHhcCCCCEEEEeecCcCCCCccccccCCCCCCcchHHHHHHHHHhCCCCceEEeCCCCCCCCCCEEEeeEEH
Confidence            998864    2578899999999999865322111 111112233333332221 122322        24557899999


Q ss_pred             HHHHHHHHHHhcC----CCCCCCeeEecccccccccC
Q 023205          253 TVVAKVAVRAATD----PVFPPGIVDVHGILRYSQKS  285 (286)
Q Consensus       253 ~Dva~~~~~~l~~----~~~~~~~~~l~~~~~~s~~~  285 (286)
                      +|+|++++.+++.    +...+++||+++++.+|+++
T Consensus       244 ~D~a~a~~~a~~~~~~~~~~~~~~yni~~~~~~s~~e  280 (352)
T PLN02240        244 MDLADGHIAALRKLFTDPDIGCEAYNLGTGKGTSVLE  280 (352)
T ss_pred             HHHHHHHHHHHhhhhhccCCCCceEEccCCCcEeHHH
Confidence            9999999888863    23446899999999988764

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=99.96  E-value=1.4e-28  Score=198.45  Aligned_cols=215  Identities=21%  Similarity=0.208  Sum_probs=175.3

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCccccc----ccCCceeEEeccCCCHhHHHHHhcCCCEEEEc
Q 023205           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRD----SWANNVIWHQGNLLSSDSWKEALDGVTAVISC  128 (286)
Q Consensus        53 ~~~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~----~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~  128 (286)
                      +...++|+||||.||||+||++.|..+|++|++++--.......    ...++++++..|+..     .++.++|.|||+
T Consensus        24 p~~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~~~~~~~fel~~hdv~~-----pl~~evD~IyhL   98 (350)
T KOG1429|consen   24 PSQNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEHWIGHPNFELIRHDVVE-----PLLKEVDQIYHL   98 (350)
T ss_pred             CCCCcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcchhccCcceeEEEeechh-----HHHHHhhhhhhh
Confidence            33457999999999999999999999999999999765442221    124578888888854     488899999999


Q ss_pred             cccCCC------cchhhhhhhHHHHHHHHHHHHcCCCEEEEEecC-CcCCCC---------------ccccchHHHHHHH
Q 023205          129 VGGFGS------NSYMYKINGTANINAIRAASEKGVKRFVYISAA-DFGVAN---------------YLLQGYYEGKRAA  186 (286)
Q Consensus       129 a~~~~~------~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~-~~~~~~---------------~~~~~y~~sK~~~  186 (286)
                      |++.++      +......|+.++.+++..|++.+ +||++.||+ +||++.               .+...|...|..+
T Consensus        99 Aapasp~~y~~npvktIktN~igtln~lglakrv~-aR~l~aSTseVYgdp~~hpq~e~ywg~vnpigpr~cydegKr~a  177 (350)
T KOG1429|consen   99 AAPASPPHYKYNPVKTIKTNVIGTLNMLGLAKRVG-ARFLLASTSEVYGDPLVHPQVETYWGNVNPIGPRSCYDEGKRVA  177 (350)
T ss_pred             ccCCCCcccccCccceeeecchhhHHHHHHHHHhC-ceEEEeecccccCCcccCCCccccccccCcCCchhhhhHHHHHH
Confidence            988753      34667899999999999999998 688888884 677643               2467899999999


Q ss_pred             HHHHHH---hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCc--cCCCccHHHHHHHHHH
Q 023205          187 ETELLT---RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPL--FTPPVNVTVVAKVAVR  261 (286)
Q Consensus       187 E~~~~~---~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--~~~~i~v~Dva~~~~~  261 (286)
                      |.++.+   ..|+.+.|.|+.+.|||..+-.-       +..+..+.....+..++.++|++  .++|++++|+.++++.
T Consensus       178 E~L~~~y~k~~giE~rIaRifNtyGPrm~~~d-------grvvsnf~~q~lr~epltv~g~G~qtRSF~yvsD~Vegll~  250 (350)
T KOG1429|consen  178 ETLCYAYHKQEGIEVRIARIFNTYGPRMHMDD-------GRVVSNFIAQALRGEPLTVYGDGKQTRSFQYVSDLVEGLLR  250 (350)
T ss_pred             HHHHHHhhcccCcEEEEEeeecccCCccccCC-------ChhhHHHHHHHhcCCCeEEEcCCcceEEEEeHHHHHHHHHH
Confidence            998875   67999999999999999876332       55667777777777888877766  7899999999999999


Q ss_pred             HhcCCCCCCCeeEeccccccc
Q 023205          262 AATDPVFPPGIVDVHGILRYS  282 (286)
Q Consensus       262 ~l~~~~~~~~~~~l~~~~~~s  282 (286)
                      +++++..  ..+||++|+.+|
T Consensus       251 Lm~s~~~--~pvNiGnp~e~T  269 (350)
T KOG1429|consen  251 LMESDYR--GPVNIGNPGEFT  269 (350)
T ss_pred             HhcCCCc--CCcccCCcccee
Confidence            9998874  359999999876

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=99.96  E-value=3.7e-28  Score=212.51  Aligned_cols=221  Identities=14%  Similarity=0.023  Sum_probs=165.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcc----cccc------cCCceeEEeccCCCHhHHHHHhcC--CC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSS----LRDS------WANNVIWHQGNLLSSDSWKEALDG--VT  123 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~----~~~~------~~~~~~~i~~Dl~d~~~~~~~~~~--~d  123 (286)
                      +++||||||+||||++++++|+++|++|++++|+.+..    ....      ...+++++.+|++|.+.+.+++++  +|
T Consensus         6 ~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d   85 (340)
T PLN02653          6 RKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDIKPD   85 (340)
T ss_pred             CCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHHcCCC
Confidence            57899999999999999999999999999999875421    1111      123588999999999999999885  69


Q ss_pred             EEEEccccCC------CcchhhhhhhHHHHHHHHHHHHcCCC-----EEEEEecC-CcCCCC---------ccccchHHH
Q 023205          124 AVISCVGGFG------SNSYMYKINGTANINAIRAASEKGVK-----RFVYISAA-DFGVAN---------YLLQGYYEG  182 (286)
Q Consensus       124 ~vi~~a~~~~------~~~~~~~~~~~~~~~l~~~a~~~~v~-----~~v~~Ss~-~~~~~~---------~~~~~y~~s  182 (286)
                      +|||+|+...      .+...+++|+.++.+++++|++.+++     +||++||. .||...         .|.+.|+.+
T Consensus        86 ~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~E~~~~~p~~~Y~~s  165 (340)
T PLN02653         86 EVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYGSTPPPQSETTPFHPRSPYAVA  165 (340)
T ss_pred             EEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHhCCCCCCCCCCCCCCCCChhHHH
Confidence            9999998743      23345688999999999999988875     89999984 566422         246789999


Q ss_pred             HHHHHHHHHH---hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCC---CCCCccCCCccHHHHH
Q 023205          183 KRAAETELLT---RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLP---LVGPLFTPPVNVTVVA  256 (286)
Q Consensus       183 K~~~E~~~~~---~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~g~~~~~~i~v~Dva  256 (286)
                      |..+|.++..   ..+++++..|+..+|||......      +...+..+.........++   ..|+..++|+|++|+|
T Consensus       166 K~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~------~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~a  239 (340)
T PLN02653        166 KVAAHWYTVNYREAYGLFACNGILFNHESPRRGENF------VTRKITRAVGRIKVGLQKKLFLGNLDASRDWGFAGDYV  239 (340)
T ss_pred             HHHHHHHHHHHHHHcCCeEEEeeeccccCCCCCccc------chhHHHHHHHHHHcCCCCceEeCCCcceecceeHHHHH
Confidence            9999998754   56888888999999998643221      1122222222222333332   2245589999999999


Q ss_pred             HHHHHHhcCCCCCCCeeEeccccccccc
Q 023205          257 KVAVRAATDPVFPPGIVDVHGILRYSQK  284 (286)
Q Consensus       257 ~~~~~~l~~~~~~~~~~~l~~~~~~s~~  284 (286)
                      ++++.+++.+.  ++.||+++++.+++.
T Consensus       240 ~a~~~~~~~~~--~~~yni~~g~~~s~~  265 (340)
T PLN02653        240 EAMWLMLQQEK--PDDYVVATEESHTVE  265 (340)
T ss_pred             HHHHHHHhcCC--CCcEEecCCCceeHH
Confidence            99999998753  578999999888765

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=99.96  E-value=7.7e-28  Score=209.30  Aligned_cols=215  Identities=26%  Similarity=0.289  Sum_probs=163.8

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccccCC---
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFG---  133 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~~~---  133 (286)
                      |+|+||||+|++|+++++.|+++|++|++++|+++.. ......+++++.+|+.|.+++.++++++|+|||+++...   
T Consensus         1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~D~~~~~~l~~~~~~~d~vi~~a~~~~~~~   79 (328)
T TIGR03466         1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDR-RNLEGLDVEIVEGDLRDPASLRKAVAGCRALFHVAADYRLWA   79 (328)
T ss_pred             CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCccc-cccccCCceEEEeeCCCHHHHHHHHhCCCEEEEeceecccCC
Confidence            4799999999999999999999999999999986542 122234789999999999999999999999999997642   


Q ss_pred             -CcchhhhhhhHHHHHHHHHHHHcCCCEEEEEecC-CcCCCCc--------------cccchHHHHHHHHHHHHH---hC
Q 023205          134 -SNSYMYKINGTANINAIRAASEKGVKRFVYISAA-DFGVANY--------------LLQGYYEGKRAAETELLT---RY  194 (286)
Q Consensus       134 -~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~-~~~~~~~--------------~~~~y~~sK~~~E~~~~~---~~  194 (286)
                       .+...++.|+.++.++++++++.++++||++||. +|+....              ....|+.+|..+|+++.+   ..
T Consensus        80 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~  159 (328)
T TIGR03466        80 PDPEEMYAANVEGTRNLLRAALEAGVERVVYTSSVATLGVRGDGTPADETTPSSLDDMIGHYKRSKFLAEQAALEMAAEK  159 (328)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEechhhcCcCCCCCCcCccCCCCcccccChHHHHHHHHHHHHHHHHHhc
Confidence             2345678999999999999999999999999994 4542110              135799999999998875   36


Q ss_pred             CCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcCCCCCCCeeE
Q 023205          195 PYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDPVFPPGIVD  274 (286)
Q Consensus       195 g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~  274 (286)
                      +++++++||+.+||+......        .....+.....  +..+...+...++++++|+|++++.+++.+. .++.|+
T Consensus       160 ~~~~~ilR~~~~~G~~~~~~~--------~~~~~~~~~~~--~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~-~~~~~~  228 (328)
T TIGR03466       160 GLPVVIVNPSTPIGPRDIKPT--------PTGRIIVDFLN--GKMPAYVDTGLNLVHVDDVAEGHLLALERGR-IGERYI  228 (328)
T ss_pred             CCCEEEEeCCccCCCCCCCCC--------cHHHHHHHHHc--CCCceeeCCCcceEEHHHHHHHHHHHHhCCC-CCceEE
Confidence            899999999999999753221        01112222221  1233333445689999999999999998755 477888


Q ss_pred             eccccccccc
Q 023205          275 VHGILRYSQK  284 (286)
Q Consensus       275 l~~~~~~s~~  284 (286)
                      ++ ++.++++
T Consensus       229 ~~-~~~~s~~  237 (328)
T TIGR03466       229 LG-GENLTLK  237 (328)
T ss_pred             ec-CCCcCHH
Confidence            85 5667654

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=99.96  E-value=1.7e-28  Score=211.85  Aligned_cols=213  Identities=19%  Similarity=0.147  Sum_probs=151.3

Q ss_pred             EEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHh---H-HHHHhc-----CCCEEEEcc
Q 023205           59 LLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSD---S-WKEALD-----GVTAVISCV  129 (286)
Q Consensus        59 VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~---~-~~~~~~-----~~d~vi~~a  129 (286)
                      ||||||+||||++|+++|+++|++++++.|+......     ...+.++|+.|..   + +..+++     ++|+|||+|
T Consensus         2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~-----~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~Vih~A   76 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK-----FVNLVDLDIADYMDKEDFLAQIMAGDDFGDIEAIFHEG   76 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchH-----HHhhhhhhhhhhhhHHHHHHHHhcccccCCccEEEECc
Confidence            8999999999999999999999988887776543110     1123445665543   3 333432     689999999


Q ss_pred             ccCC----CcchhhhhhhHHHHHHHHHHHHcCCCEEEEEecC-CcCCC----------CccccchHHHHHHHHHHHHH--
Q 023205          130 GGFG----SNSYMYKINGTANINAIRAASEKGVKRFVYISAA-DFGVA----------NYLLQGYYEGKRAAETELLT--  192 (286)
Q Consensus       130 ~~~~----~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~-~~~~~----------~~~~~~y~~sK~~~E~~~~~--  192 (286)
                      +...    .....++.|+.++.+++++|++.++ +|||+||. +|+..          ..|.+.|+.+|..+|+++++  
T Consensus        77 ~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~-~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~  155 (308)
T PRK11150         77 ACSSTTEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTDDFIEEREYEKPLNVYGYSKFLFDEYVRQIL  155 (308)
T ss_pred             eecCCcCCChHHHHHHHHHHHHHHHHHHHHcCC-cEEEEcchHHhCcCCCCCCccCCCCCCCCHHHHHHHHHHHHHHHHH
Confidence            8532    2234678899999999999999987 69999994 45532          12457899999999998875  


Q ss_pred             -hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCC-CCC--ccCCCccHHHHHHHHHHHhcCCCC
Q 023205          193 -RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPL-VGP--LFTPPVNVTVVAKVAVRAATDPVF  268 (286)
Q Consensus       193 -~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~--~~~~~i~v~Dva~~~~~~l~~~~~  268 (286)
                       ..+++++++||+.+||++.....     .+......+...........+ .|+  ..++|+|++|+|++++.+++.+. 
T Consensus       156 ~~~~~~~~~lR~~~vyG~~~~~~~-----~~~~~~~~~~~~~~~~~~~~i~~g~~~~~r~~i~v~D~a~a~~~~~~~~~-  229 (308)
T PRK11150        156 PEANSQICGFRYFNVYGPREGHKG-----SMASVAFHLNNQLNNGENPKLFEGSENFKRDFVYVGDVAAVNLWFWENGV-  229 (308)
T ss_pred             HHcCCCEEEEeeeeecCCCCCCCC-----ccchhHHHHHHHHhcCCCCEEecCCCceeeeeeeHHHHHHHHHHHHhcCC-
Confidence             46899999999999999753321     111222223333333322222 233  36899999999999999987643 


Q ss_pred             CCCeeEeccccccccc
Q 023205          269 PPGIVDVHGILRYSQK  284 (286)
Q Consensus       269 ~~~~~~l~~~~~~s~~  284 (286)
                       +++||+++++.++++
T Consensus       230 -~~~yni~~~~~~s~~  244 (308)
T PRK11150        230 -SGIFNCGTGRAESFQ  244 (308)
T ss_pred             -CCeEEcCCCCceeHH
Confidence             579999999888865

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=99.96  E-value=4.3e-29  Score=212.61  Aligned_cols=199  Identities=26%  Similarity=0.393  Sum_probs=153.7

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcC--CCEEEEccccCC-
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDG--VTAVISCVGGFG-  133 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~--~d~vi~~a~~~~-  133 (286)
                      |+|||||++|++|+++++.|.++|++|+++.|.                ..|+.|.+.+.+.++.  .|+|||||+..+ 
T Consensus         1 MriLI~GasG~lG~~l~~~l~~~~~~v~~~~r~----------------~~dl~d~~~~~~~~~~~~pd~Vin~aa~~~~   64 (286)
T PF04321_consen    1 MRILITGASGFLGSALARALKERGYEVIATSRS----------------DLDLTDPEAVAKLLEAFKPDVVINCAAYTNV   64 (286)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTTSEEEEEESTT----------------CS-TTSHHHHHHHHHHH--SEEEE------H
T ss_pred             CEEEEECCCCHHHHHHHHHHhhCCCEEEEeCch----------------hcCCCCHHHHHHHHHHhCCCeEeccceeecH
Confidence            689999999999999999999999999999777                5789999999999875  799999998764 


Q ss_pred             -----CcchhhhhhhHHHHHHHHHHHHcCCCEEEEEecC-CcCC----------CCccccchHHHHHHHHHHHHHhCCCc
Q 023205          134 -----SNSYMYKINGTANINAIRAASEKGVKRFVYISAA-DFGV----------ANYLLQGYYEGKRAAETELLTRYPYG  197 (286)
Q Consensus       134 -----~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~-~~~~----------~~~~~~~y~~sK~~~E~~~~~~~g~~  197 (286)
                           ++...+++|+.++.+++++|++.+. ++||+||. +++.          ...|.+.||++|..+|+.+++... +
T Consensus        65 ~~ce~~p~~a~~iN~~~~~~la~~~~~~~~-~li~~STd~VFdG~~~~~y~E~d~~~P~~~YG~~K~~~E~~v~~~~~-~  142 (286)
T PF04321_consen   65 DACEKNPEEAYAINVDATKNLAEACKERGA-RLIHISTDYVFDGDKGGPYTEDDPPNPLNVYGRSKLEGEQAVRAACP-N  142 (286)
T ss_dssp             HHHHHSHHHHHHHHTHHHHHHHHHHHHCT--EEEEEEEGGGS-SSTSSSB-TTS----SSHHHHHHHHHHHHHHHH-S-S
T ss_pred             HhhhhChhhhHHHhhHHHHHHHHHHHHcCC-cEEEeeccEEEcCCcccccccCCCCCCCCHHHHHHHHHHHHHHHhcC-C
Confidence                 4557889999999999999999997 89999994 3311          223578899999999999988565 9


Q ss_pred             EEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcCCCC---CCCeeE
Q 023205          198 GVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDPVF---PPGIVD  274 (286)
Q Consensus       198 ~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~~~---~~~~~~  274 (286)
                      +.|+|++++||+..           .+++.++.........+.+..|...++++++|+|+++..++++...   ..++||
T Consensus       143 ~~IlR~~~~~g~~~-----------~~~~~~~~~~~~~~~~i~~~~d~~~~p~~~~dlA~~i~~l~~~~~~~~~~~Giyh  211 (286)
T PF04321_consen  143 ALILRTSWVYGPSG-----------RNFLRWLLRRLRQGEPIKLFDDQYRSPTYVDDLARVILELIEKNLSGASPWGIYH  211 (286)
T ss_dssp             EEEEEE-SEESSSS-----------SSHHHHHHHHHHCTSEEEEESSCEE--EEHHHHHHHHHHHHHHHHH-GGG-EEEE
T ss_pred             EEEEecceecccCC-----------CchhhhHHHHHhcCCeeEeeCCceeCCEEHHHHHHHHHHHHHhcccccccceeEE
Confidence            99999999999933           3577888888888888888888999999999999999999986542   358999


Q ss_pred             eccccccccc
Q 023205          275 VHGILRYSQK  284 (286)
Q Consensus       275 l~~~~~~s~~  284 (286)
                      ++|++.+||-
T Consensus       212 ~~~~~~~S~~  221 (286)
T PF04321_consen  212 LSGPERVSRY  221 (286)
T ss_dssp             ---BS-EEHH
T ss_pred             EecCcccCHH
Confidence            9999999873

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=99.96  E-value=2.9e-28  Score=203.87  Aligned_cols=194  Identities=27%  Similarity=0.332  Sum_probs=123.1

Q ss_pred             EEcCCChhHHHHHHHHHHCCC--eEEEEecCCCcccc---------------cc---cCCceeEEeccCCCH------hH
Q 023205           61 VLGGNGFVGSHICREALDRGL--TVASLSRSGRSSLR---------------DS---WANNVIWHQGNLLSS------DS  114 (286)
Q Consensus        61 VtGatG~iG~~l~~~Ll~~g~--~V~~l~R~~~~~~~---------------~~---~~~~~~~i~~Dl~d~------~~  114 (286)
                      |||||||+|++|+++|++++.  +|+|++|..+....               ..   ..++++++.||++++      +.
T Consensus         1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~   80 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED   80 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred             CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence            799999999999999999986  99999998754100               01   157999999999874      56


Q ss_pred             HHHHhcCCCEEEEccccCCCc---chhhhhhhHHHHHHHHHHHHcCCCEEEEEecCCc-CCCC-----------------
Q 023205          115 WKEALDGVTAVISCVGGFGSN---SYMYKINGTANINAIRAASEKGVKRFVYISAADF-GVAN-----------------  173 (286)
Q Consensus       115 ~~~~~~~~d~vi~~a~~~~~~---~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~~~-~~~~-----------------  173 (286)
                      +..+.+++|+|||||+.++..   ...+++|+.|+.++++.|.+...++|+|+||+.. +...                 
T Consensus        81 ~~~L~~~v~~IiH~Aa~v~~~~~~~~~~~~NV~gt~~ll~la~~~~~~~~~~iSTa~v~~~~~~~~~~~~~~~~~~~~~~  160 (249)
T PF07993_consen   81 YQELAEEVDVIIHCAASVNFNAPYSELRAVNVDGTRNLLRLAAQGKRKRFHYISTAYVAGSRPGTIEEKVYPEEEDDLDP  160 (249)
T ss_dssp             HHHHHHH--EEEE--SS-SBS-S--EEHHHHHHHHHHHHHHHTSSS---EEEEEEGGGTTS-TTT--SSS-HHH--EEE-
T ss_pred             hhccccccceeeecchhhhhcccchhhhhhHHHHHHHHHHHHHhccCcceEEeccccccCCCCCcccccccccccccchh
Confidence            777888999999999988643   4677999999999999999777779999999421 1100                 


Q ss_pred             --ccccchHHHHHHHHHHHHHh---CCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCC---CCCCc
Q 023205          174 --YLLQGYYEGKRAAETELLTR---YPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLP---LVGPL  245 (286)
Q Consensus       174 --~~~~~y~~sK~~~E~~~~~~---~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~g~~  245 (286)
                        ...++|.+||+.+|+++++.   .|++++|+|||.++|...++.+...     .....+.......+.+|   ...+.
T Consensus       161 ~~~~~~gY~~SK~~aE~~l~~a~~~~g~p~~I~Rp~~i~g~~~~G~~~~~-----~~~~~~~~~~~~~~~~p~~~~~~~~  235 (249)
T PF07993_consen  161 PQGFPNGYEQSKWVAERLLREAAQRHGLPVTIYRPGIIVGDSRTGWWNSD-----DFFPYLLRSCIALGAFPDLPGDPDA  235 (249)
T ss_dssp             -TTSEE-HHHHHHHHHHHHHHHHHHH---EEEEEE-EEE-SSSSS---TT-----BHHHHHHHHHHHH-EEES-SB---T
T ss_pred             hccCCccHHHHHHHHHHHHHHHHhcCCceEEEEecCcccccCCCceeecc-----chHHHHHHHHHHcCCcccccCCCCc
Confidence              12579999999999999874   3999999999999996665543321     21222222222233333   22344


Q ss_pred             cCCCccHHHHHHHH
Q 023205          246 FTPPVNVTVVAKVA  259 (286)
Q Consensus       246 ~~~~i~v~Dva~~~  259 (286)
                      ..+++++|.+|++|
T Consensus       236 ~~d~vPVD~va~aI  249 (249)
T PF07993_consen  236 RLDLVPVDYVARAI  249 (249)
T ss_dssp             T--EEEHHHHHHHH
T ss_pred             eEeEECHHHHHhhC
Confidence            69999999999986

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=99.96  E-value=1.9e-27  Score=205.76  Aligned_cols=216  Identities=19%  Similarity=0.173  Sum_probs=157.4

Q ss_pred             EEEEcCCChhHHHHHHHHHHCCC-eEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhc----CCCEEEEccccCC
Q 023205           59 LLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD----GVTAVISCVGGFG  133 (286)
Q Consensus        59 VlVtGatG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~----~~d~vi~~a~~~~  133 (286)
                      |||||||||||+++++.|+++|+ +|+++.|........  ......+.+|+.+.+.++.+.+    ++|+|||+|+...
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~~~~~~D~vvh~A~~~~   78 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGHKFL--NLADLVIADYIDKEDFLDRLEKGAFGKIEAIFHQGACSD   78 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCchhhh--hhhheeeeccCcchhHHHHHHhhccCCCCEEEECccccC
Confidence            69999999999999999999997 788887754321101  0112456788888887777654    7999999998643


Q ss_pred             ----CcchhhhhhhHHHHHHHHHHHHcCCCEEEEEecC-CcCCC----------CccccchHHHHHHHHHHHHH-----h
Q 023205          134 ----SNSYMYKINGTANINAIRAASEKGVKRFVYISAA-DFGVA----------NYLLQGYYEGKRAAETELLT-----R  193 (286)
Q Consensus       134 ----~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~-~~~~~----------~~~~~~y~~sK~~~E~~~~~-----~  193 (286)
                          ++...+++|+.++.+++++|++.++ +||++||. +|+..          ..+.+.|+.+|..+|.++++     .
T Consensus        79 ~~~~~~~~~~~~n~~~~~~ll~~~~~~~~-~~v~~SS~~vy~~~~~~~~e~~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~  157 (314)
T TIGR02197        79 TTETDGEYMMENNYQYSKRLLDWCAEKGI-PFIYASSAATYGDGEAGFREGRELERPLNVYGYSKFLFDQYVRRRVLPEA  157 (314)
T ss_pred             ccccchHHHHHHHHHHHHHHHHHHHHhCC-cEEEEccHHhcCCCCCCcccccCcCCCCCHHHHHHHHHHHHHHHHhHhhc
Confidence                3345678999999999999999887 79999994 45421          12567899999999998864     2


Q ss_pred             CCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCC--------CCCccCCCccHHHHHHHHHHHhcC
Q 023205          194 YPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPL--------VGPLFTPPVNVTVVAKVAVRAATD  265 (286)
Q Consensus       194 ~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~g~~~~~~i~v~Dva~~~~~~l~~  265 (286)
                      .+++++++||+.+||+......     .+...+..+.........+.+        .|+..++|+|++|+++++..++..
T Consensus       158 ~~~~~~~lR~~~vyG~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~i~~~~~~  232 (314)
T TIGR02197       158 LSAQVVGLRYFNVYGPREYHKG-----KMASVAFHLFNQIKAGGNVKLFKSSEGFKDGEQLRDFVYVKDVVDVNLWLLEN  232 (314)
T ss_pred             cCCceEEEEEeeccCCCCCCCC-----CcccHHHHHHHHHhcCCCeEEecCccccCCCCceeeeEEHHHHHHHHHHHHhc
Confidence            4679999999999999753211     111223223332222222222        244568999999999999999987


Q ss_pred             CCCCCCeeEeccccccccc
Q 023205          266 PVFPPGIVDVHGILRYSQK  284 (286)
Q Consensus       266 ~~~~~~~~~l~~~~~~s~~  284 (286)
                       . .+++||+++++.++++
T Consensus       233 -~-~~~~yni~~~~~~s~~  249 (314)
T TIGR02197       233 -G-VSGIFNLGTGRARSFN  249 (314)
T ss_pred             -c-cCceEEcCCCCCccHH
Confidence             3 4779999999988875

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=99.96  E-value=1.9e-27  Score=204.93  Aligned_cols=208  Identities=19%  Similarity=0.131  Sum_probs=152.7

Q ss_pred             EEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhc--CCCEEEEccccCC----
Q 023205           60 LVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD--GVTAVISCVGGFG----  133 (286)
Q Consensus        60 lVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~--~~d~vi~~a~~~~----  133 (286)
                      |||||+||||++|++.|++.|++|+++.+..               .+|+.|.+++.++++  ++|+|||||+...    
T Consensus         1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~~---------------~~Dl~~~~~l~~~~~~~~~d~Vih~A~~~~~~~~   65 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTHK---------------ELDLTRQADVEAFFAKEKPTYVILAAAKVGGIHA   65 (306)
T ss_pred             CcccCCCcccHHHHHHHHhCCCcEEEeeccc---------------cCCCCCHHHHHHHHhccCCCEEEEeeeeecccch
Confidence            6999999999999999999999887665331               489999999999887  4799999998632    


Q ss_pred             ---CcchhhhhhhHHHHHHHHHHHHcCCCEEEEEecC-CcCCC--------------Ccccc-chHHHHHHHHHHHHH--
Q 023205          134 ---SNSYMYKINGTANINAIRAASEKGVKRFVYISAA-DFGVA--------------NYLLQ-GYYEGKRAAETELLT--  192 (286)
Q Consensus       134 ---~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~-~~~~~--------------~~~~~-~y~~sK~~~E~~~~~--  192 (286)
                         ++...++.|+.++.+++++|++.++++||++||. +|+..              ..|.+ .|+.+|..+|++++.  
T Consensus        66 ~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~e~~~~~~~  145 (306)
T PLN02725         66 NMTYPADFIRENLQIQTNVIDAAYRHGVKKLLFLGSSCIYPKFAPQPIPETALLTGPPEPTNEWYAIAKIAGIKMCQAYR  145 (306)
T ss_pred             hhhCcHHHHHHHhHHHHHHHHHHHHcCCCeEEEeCceeecCCCCCCCCCHHHhccCCCCCCcchHHHHHHHHHHHHHHHH
Confidence               2345678999999999999999999999999994 45532              11223 499999999987653  


Q ss_pred             -hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCC-C--CCccCCCccHHHHHHHHHHHhcCCCC
Q 023205          193 -RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPL-V--GPLFTPPVNVTVVAKVAVRAATDPVF  268 (286)
Q Consensus       193 -~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--g~~~~~~i~v~Dva~~~~~~l~~~~~  268 (286)
                       ..+++++++||+.+||+.....-. ....+...+..+........++.. .  |+..++|+|++|++++++.+++....
T Consensus       146 ~~~~~~~~~~R~~~vyG~~~~~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dv~~~~~~~~~~~~~  224 (306)
T PLN02725        146 IQYGWDAISGMPTNLYGPHDNFHPE-NSHVIPALIRRFHEAKANGAPEVVVWGSGSPLREFLHVDDLADAVVFLMRRYSG  224 (306)
T ss_pred             HHhCCCEEEEEecceeCCCCCCCCC-CCcccHHHHHHHHHHhhcCCCeEEEcCCCCeeeccccHHHHHHHHHHHHhcccc
Confidence             568999999999999997531100 000111222222222222333332 3  45578999999999999999987543


Q ss_pred             CCCeeEeccccccccc
Q 023205          269 PPGIVDVHGILRYSQK  284 (286)
Q Consensus       269 ~~~~~~l~~~~~~s~~  284 (286)
                       ++.||+++++.++++
T Consensus       225 -~~~~ni~~~~~~s~~  239 (306)
T PLN02725        225 -AEHVNVGSGDEVTIK  239 (306)
T ss_pred             -CcceEeCCCCcccHH
Confidence             567899998888775

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.95  E-value=7.9e-27  Score=186.34  Aligned_cols=174  Identities=35%  Similarity=0.446  Sum_probs=141.8

Q ss_pred             EEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccccCCCcchh
Q 023205           59 LLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFGSNSYM  138 (286)
Q Consensus        59 VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~~~~~~~~  138 (286)
                      |+|+||||++|++++++|+++|++|++++|++.+...   ..+++++.+|+.|++.+.++++++|+||+++++...    
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~---~~~~~~~~~d~~d~~~~~~al~~~d~vi~~~~~~~~----   73 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED---SPGVEIIQGDLFDPDSVKAALKGADAVIHAAGPPPK----   73 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH---CTTEEEEESCTTCHHHHHHHHTTSSEEEECCHSTTT----
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc---ccccccceeeehhhhhhhhhhhhcchhhhhhhhhcc----
Confidence            7999999999999999999999999999999776333   679999999999999999999999999999987544    


Q ss_pred             hhhhhHHHHHHHHHHHHcCCCEEEEEecCCcCCC-Cc--------cccchHHHHHHHHHHHHHhCCCcEEEEeeCeeecC
Q 023205          139 YKINGTANINAIRAASEKGVKRFVYISAADFGVA-NY--------LLQGYYEGKRAAETELLTRYPYGGVILRPGFIYGT  209 (286)
Q Consensus       139 ~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~~~~~~-~~--------~~~~y~~sK~~~E~~~~~~~g~~~~ilRp~~v~g~  209 (286)
                         +.....++++++++.+++++|++|+...... ..        ....|...|..+|+.+.+ .+++|+++||+.+||+
T Consensus        74 ---~~~~~~~~~~a~~~~~~~~~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~-~~~~~~ivrp~~~~~~  149 (183)
T PF13460_consen   74 ---DVDAAKNIIEAAKKAGVKRVVYLSSAGVYRDPPGLFSDEDKPIFPEYARDKREAEEALRE-SGLNWTIVRPGWIYGN  149 (183)
T ss_dssp             ---HHHHHHHHHHHHHHTTSSEEEEEEETTGTTTCTSEEEGGTCGGGHHHHHHHHHHHHHHHH-STSEEEEEEESEEEBT
T ss_pred             ---cccccccccccccccccccceeeeccccCCCCCcccccccccchhhhHHHHHHHHHHHHh-cCCCEEEEECcEeEeC
Confidence               2667779999999999999999999643222 11        124689999999998875 6999999999999998


Q ss_pred             CCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcC
Q 023205          210 RTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATD  265 (286)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~  265 (286)
                      ......     +                 +...++...++|+++|+|+++++++++
T Consensus       150 ~~~~~~-----~-----------------~~~~~~~~~~~i~~~DvA~~~~~~l~~  183 (183)
T PF13460_consen  150 PSRSYR-----L-----------------IKEGGPQGVNFISREDVAKAIVEALEN  183 (183)
T ss_dssp             TSSSEE-----E-----------------ESSTSTTSHCEEEHHHHHHHHHHHHH-
T ss_pred             CCccee-----E-----------------EeccCCCCcCcCCHHHHHHHHHHHhCC
Confidence            743110     0                 000234456899999999999999864

...

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=99.95  E-value=8.8e-27  Score=202.45  Aligned_cols=227  Identities=23%  Similarity=0.246  Sum_probs=163.8

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCccccccc----CCceeEEeccCCCHhHHHHHhc--CCCEEEEcccc
Q 023205           58 KLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSW----ANNVIWHQGNLLSSDSWKEALD--GVTAVISCVGG  131 (286)
Q Consensus        58 ~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~----~~~~~~i~~Dl~d~~~~~~~~~--~~d~vi~~a~~  131 (286)
                      +||||||+|+||++++++|+++|++|+++.|..........    ..+++++.+|+.+++.+.++++  ++|+|||+||.
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vv~~ag~   80 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGERITRVTFVEGDLRDRELLDRLFEEHKIDAVIHFAGL   80 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhccccceEEEECCCCCHHHHHHHHHhCCCcEEEECccc
Confidence            58999999999999999999999999988764332111100    1257789999999999999886  68999999986


Q ss_pred             CC------CcchhhhhhhHHHHHHHHHHHHcCCCEEEEEecC-CcCCCC----------ccccchHHHHHHHHHHHHH--
Q 023205          132 FG------SNSYMYKINGTANINAIRAASEKGVKRFVYISAA-DFGVAN----------YLLQGYYEGKRAAETELLT--  192 (286)
Q Consensus       132 ~~------~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~-~~~~~~----------~~~~~y~~sK~~~E~~~~~--  192 (286)
                      ..      .....++.|+.++.+++++|++.++++||++||. .|+...          .+.+.|+.+|..+|.+++.  
T Consensus        81 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~ss~~~~g~~~~~~~~e~~~~~~~~~y~~sK~~~e~~~~~~~  160 (328)
T TIGR01179        81 IAVGESVQDPLKYYRNNVVNTLNLLEAMQQTGVKKFIFSSSAAVYGEPSSIPISEDSPLGPINPYGRSKLMSERILRDLS  160 (328)
T ss_pred             cCcchhhcCchhhhhhhHHHHHHHHHHHHhcCCCEEEEecchhhcCCCCCCCccccCCCCCCCchHHHHHHHHHHHHHHH
Confidence            52      2235568899999999999999999999999984 344321          2457899999999998864  


Q ss_pred             -h-CCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcc-cCCC-------CCC-CCCccCCCccHHHHHHHHHH
Q 023205          193 -R-YPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAK-PLSQ-------LPL-VGPLFTPPVNVTVVAKVAVR  261 (286)
Q Consensus       193 -~-~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-------~~~-~g~~~~~~i~v~Dva~~~~~  261 (286)
                       . .+++++++||+.+||+...+...........++..+..... ....       ++. .|+...+|||++|+|++++.
T Consensus       161 ~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~D~a~~~~~  240 (328)
T TIGR01179       161 KADPGLSYVILRYFNVAGADPEGTIGEDPPGITHLIPYACQVAVGKRDKLTIFGTDYPTPDGTCVRDYIHVMDLADAHLA  240 (328)
T ss_pred             HhccCCCEEEEecCcccCCCCCCccccCCcccchHHHHHHHHHHhCCCCeEEeCCcccCCCCceEEeeeeHHHHHHHHHH
Confidence             2 78999999999999986543211111111223333332221 1111       222 24456799999999999999


Q ss_pred             HhcCC--CCCCCeeEeccccccccc
Q 023205          262 AATDP--VFPPGIVDVHGILRYSQK  284 (286)
Q Consensus       262 ~l~~~--~~~~~~~~l~~~~~~s~~  284 (286)
                      ++...  ...+++||+++++.++++
T Consensus       241 ~~~~~~~~~~~~~~n~~~~~~~s~~  265 (328)
T TIGR01179       241 ALEYLLNGGESHVYNLGYGQGFSVL  265 (328)
T ss_pred             HHhhhhcCCCcceEEcCCCCcccHH
Confidence            98642  234789999999888765

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>PRK05865 hypothetical protein; Provisional

Probab=99.95  E-value=6.7e-27  Score=220.64  Aligned_cols=190  Identities=22%  Similarity=0.323  Sum_probs=153.5

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccccCCCcc
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFGSNS  136 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~~~~~~  136 (286)
                      |+|+||||+||||++++++|+++|++|++++|+....    ...+++++.+|+.|.+.+.++++++|+|||+|+....  
T Consensus         1 MkILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~----~~~~v~~v~gDL~D~~~l~~al~~vD~VVHlAa~~~~--   74 (854)
T PRK05865          1 MRIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDS----WPSSADFIAADIRDATAVESAMTGADVVAHCAWVRGR--   74 (854)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhh----cccCceEEEeeCCCHHHHHHHHhCCCEEEECCCcccc--
Confidence            4799999999999999999999999999999975432    1236889999999999999999999999999986543  


Q ss_pred             hhhhhhhHHHHHHHHHHHHcCCCEEEEEecCCcCCCCccccchHHHHHHHHHHHHHhCCCcEEEEeeCeeecCCCCCccc
Q 023205          137 YMYKINGTANINAIRAASEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLTRYPYGGVILRPGFIYGTRTVGGMK  216 (286)
Q Consensus       137 ~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~~~~g~~~~ilRp~~v~g~~~~~~~~  216 (286)
                       .+++|+.++.+++++|++.++++|||+||..              |..+|+++.+ .+++++++||+++|||...    
T Consensus        75 -~~~vNv~GT~nLLeAa~~~gvkr~V~iSS~~--------------K~aaE~ll~~-~gl~~vILRp~~VYGP~~~----  134 (854)
T PRK05865         75 -NDHINIDGTANVLKAMAETGTGRIVFTSSGH--------------QPRVEQMLAD-CGLEWVAVRCALIFGRNVD----  134 (854)
T ss_pred             -hHHHHHHHHHHHHHHHHHcCCCeEEEECCcH--------------HHHHHHHHHH-cCCCEEEEEeceEeCCChH----
Confidence             5688999999999999999999999999942              8999997755 7999999999999998521    


Q ss_pred             cCccccCchHHHHHHhcccCCCCCCCC--CccCCCccHHHHHHHHHHHhcCCCCCCCeeEeccccccccc
Q 023205          217 LPLGVIGSPMEMVLQHAKPLSQLPLVG--PLFTPPVNVTVVAKVAVRAATDPVFPPGIVDVHGILRYSQK  284 (286)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~g--~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~l~~~~~~s~~  284 (286)
                             .++..+.    ....+ ..|  +..++|||++|+|++++.+++++...+++||+++++.+|++
T Consensus       135 -------~~i~~ll----~~~v~-~~G~~~~~~dfIhVdDVA~Ai~~aL~~~~~~ggvyNIgsg~~~Si~  192 (854)
T PRK05865        135 -------NWVQRLF----ALPVL-PAGYADRVVQVVHSDDAQRLLVRALLDTVIDSGPVNLAAPGELTFR  192 (854)
T ss_pred             -------HHHHHHh----cCcee-ccCCCCceEeeeeHHHHHHHHHHHHhCCCcCCCeEEEECCCcccHH
Confidence                   1111111    11111 223  33568999999999999998765545789999999988875

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=99.95  E-value=8.8e-27  Score=199.07  Aligned_cols=215  Identities=25%  Similarity=0.299  Sum_probs=165.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCC--CeEEEEecCCCcc-c-ccc---cCCceeEEeccCCCHhHHHHHhcCCCEEEEc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRG--LTVASLSRSGRSS-L-RDS---WANNVIWHQGNLLSSDSWKEALDGVTAVISC  128 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g--~~V~~l~R~~~~~-~-~~~---~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~  128 (286)
                      +.+++||||+||+|.||+++|++.+  .+|++++..+... . .+.   ....++++++|+.|...+..++.++ .|+||
T Consensus         4 ~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~~~~~v~~~~~D~~~~~~i~~a~~~~-~Vvh~   82 (361)
T KOG1430|consen    4 KLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGFRSGRVTVILGDLLDANSISNAFQGA-VVVHC   82 (361)
T ss_pred             CCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcccCCceeEEecchhhhhhhhhhccCc-eEEEe
Confidence            5689999999999999999999998  7999999887521 1 111   2568999999999999999999999 77777


Q ss_pred             cccC------CCcchhhhhhhHHHHHHHHHHHHcCCCEEEEEecCC---cCCC--------C---ccccchHHHHHHHHH
Q 023205          129 VGGF------GSNSYMYKINGTANINAIRAASEKGVKRFVYISAAD---FGVA--------N---YLLQGYYEGKRAAET  188 (286)
Q Consensus       129 a~~~------~~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~~---~~~~--------~---~~~~~y~~sK~~~E~  188 (286)
                      |+..      .+....+++|+.|+.|++++|.+.+++++||+||..   .|.+        +   .....|+.+|..+|+
T Consensus        83 aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~v~~lIYtSs~~Vvf~g~~~~n~~E~~p~p~~~~d~Y~~sKa~aE~  162 (361)
T KOG1430|consen   83 AASPVPDFVENDRDLAMRVNVNGTLNVIEACKELGVKRLIYTSSAYVVFGGEPIINGDESLPYPLKHIDPYGESKALAEK  162 (361)
T ss_pred             ccccCccccccchhhheeecchhHHHHHHHHHHhCCCEEEEecCceEEeCCeecccCCCCCCCccccccccchHHHHHHH
Confidence            6543      235678899999999999999999999999999952   1111        1   123589999999999


Q ss_pred             HHHHhCC---CcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCC--CCCCccCCCccHHHHHHHHHHHh
Q 023205          189 ELLTRYP---YGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLP--LVGPLFTPPVNVTVVAKVAVRAA  263 (286)
Q Consensus       189 ~~~~~~g---~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~~~~~~i~v~Dva~~~~~~l  263 (286)
                      +++++.|   +.+++|||..+|||++...           ...+....+...-+-  ..++...++++++.++.+++.+.
T Consensus       163 ~Vl~an~~~~l~T~aLR~~~IYGpgd~~~-----------~~~i~~~~~~g~~~f~~g~~~~~~~~~~~~Nva~ahilA~  231 (361)
T KOG1430|consen  163 LVLEANGSDDLYTCALRPPGIYGPGDKRL-----------LPKIVEALKNGGFLFKIGDGENLNDFTYGENVAWAHILAA  231 (361)
T ss_pred             HHHHhcCCCCeeEEEEccccccCCCCccc-----------cHHHHHHHHccCceEEeeccccccceEEechhHHHHHHHH
Confidence            9998664   8899999999999987432           333444443333222  22345778999998888877665


Q ss_pred             c-----CCCCCCCeeEeccccccc
Q 023205          264 T-----DPVFPPGIVDVHGILRYS  282 (286)
Q Consensus       264 ~-----~~~~~~~~~~l~~~~~~s  282 (286)
                      .     .+...|+.|.|.++.++.
T Consensus       232 ~aL~~~~~~~~Gq~yfI~d~~p~~  255 (361)
T KOG1430|consen  232 RALLDKSPSVNGQFYFITDDTPVR  255 (361)
T ss_pred             HHHHhcCCccCceEEEEeCCCcch
Confidence            3     455679999999987764

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.95  E-value=5.4e-27  Score=194.95  Aligned_cols=206  Identities=20%  Similarity=0.164  Sum_probs=154.7

Q ss_pred             EEEEcCCChhHHHHHHHHHHCC-CeEEEEecCCCcccc---cc----cCCcee----EEeccCCCHhHHHHHhc--CCCE
Q 023205           59 LLVLGGNGFVGSHICREALDRG-LTVASLSRSGRSSLR---DS----WANNVI----WHQGNLLSSDSWKEALD--GVTA  124 (286)
Q Consensus        59 VlVtGatG~iG~~l~~~Ll~~g-~~V~~l~R~~~~~~~---~~----~~~~~~----~i~~Dl~d~~~~~~~~~--~~d~  124 (286)
                      ||||||+|.||+.|+++|++.+ .++++++|++.+...   +.    ..++++    .+.+|+.|.+.+.++++  ++|+
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~~pdi   80 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEYKPDI   80 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT--T-SE
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhcCCCE
Confidence            7999999999999999999987 589999999755211   11    123444    45999999999999999  8999


Q ss_pred             EEEccccC------CCcchhhhhhhHHHHHHHHHHHHcCCCEEEEEecCCcCCCCccccchHHHHHHHHHHHHHh-----
Q 023205          125 VISCVGGF------GSNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLTR-----  193 (286)
Q Consensus       125 vi~~a~~~------~~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~~~-----  193 (286)
                      |||+|+.-      .++.+..+.|+.|+.|++++|.++++++||++||   +..-.|.+.||++|..+|+++...     
T Consensus        81 VfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~~v~~~v~IST---DKAv~PtnvmGatKrlaE~l~~~~~~~~~  157 (293)
T PF02719_consen   81 VFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEHGVERFVFIST---DKAVNPTNVMGATKRLAEKLVQAANQYSG  157 (293)
T ss_dssp             EEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHTT-SEEEEEEE---CGCSS--SHHHHHHHHHHHHHHHHCCTSS
T ss_pred             EEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEccc---cccCCCCcHHHHHHHHHHHHHHHHhhhCC
Confidence            99999964      3566888999999999999999999999999999   455668899999999999988752     


Q ss_pred             -CCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCC-CccCCCccHHHHHHHHHHHhcCCCCCCC
Q 023205          194 -YPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVG-PLFTPPVNVTVVAKVAVRAATDPVFPPG  271 (286)
Q Consensus       194 -~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~i~v~Dva~~~~~~l~~~~~~~~  271 (286)
                       .+..++++|.|+|.|..            |+.++.+.+.++..+++++.. +..+-|+++++.++.+++++.... .|+
T Consensus       158 ~~~t~f~~VRFGNVlgS~------------GSVip~F~~Qi~~g~PlTvT~p~mtRffmti~EAv~Lvl~a~~~~~-~ge  224 (293)
T PF02719_consen  158 NSDTKFSSVRFGNVLGSR------------GSVIPLFKKQIKNGGPLTVTDPDMTRFFMTIEEAVQLVLQAAALAK-GGE  224 (293)
T ss_dssp             SS--EEEEEEE-EETTGT------------TSCHHHHHHHHHTTSSEEECETT-EEEEE-HHHHHHHHHHHHHH---TTE
T ss_pred             CCCcEEEEEEecceecCC------------CcHHHHHHHHHHcCCcceeCCCCcEEEEecHHHHHHHHHHHHhhCC-CCc
Confidence             24789999999999876            568899999999999998754 447789999999999999987644 267


Q ss_pred             eeEeccccc
Q 023205          272 IVDVHGILR  280 (286)
Q Consensus       272 ~~~l~~~~~  280 (286)
                      +|.+.-+++
T Consensus       225 ifvl~mg~~  233 (293)
T PF02719_consen  225 IFVLDMGEP  233 (293)
T ss_dssp             EEEE---TC
T ss_pred             EEEecCCCC
Confidence            777655443

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.95  E-value=3.5e-27  Score=199.27  Aligned_cols=195  Identities=24%  Similarity=0.303  Sum_probs=151.3

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCC-CeEEEEecCCCccc---------------ccccCCceeEEeccCC------CHhH
Q 023205           57 EKLLVLGGNGFVGSHICREALDRG-LTVASLSRSGRSSL---------------RDSWANNVIWHQGNLL------SSDS  114 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g-~~V~~l~R~~~~~~---------------~~~~~~~~~~i~~Dl~------d~~~  114 (286)
                      ++||+||||||+|.+++.+|+.+- .+|+|++|..++..               .+...++++++.+|+.      +...
T Consensus         1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~   80 (382)
T COG3320           1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERT   80 (382)
T ss_pred             CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHH
Confidence            479999999999999999999985 59999999877421               1344679999999996      4567


Q ss_pred             HHHHhcCCCEEEEccccCC---CcchhhhhhhHHHHHHHHHHHHcCCCEEEEEecCCcCCC-------------------
Q 023205          115 WKEALDGVTAVISCVGGFG---SNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGVA-------------------  172 (286)
Q Consensus       115 ~~~~~~~~d~vi~~a~~~~---~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~~~~~~-------------------  172 (286)
                      +.++.+.+|.|||+++.++   +..+...+|+.|+..+++.|.....|.++|+||++.+..                   
T Consensus        81 ~~~La~~vD~I~H~gA~Vn~v~pYs~L~~~NVlGT~evlrLa~~gk~Kp~~yVSsisv~~~~~~~~~~~~~~~~~~~~~~  160 (382)
T COG3320          81 WQELAENVDLIIHNAALVNHVFPYSELRGANVLGTAEVLRLAATGKPKPLHYVSSISVGETEYYSNFTVDFDEISPTRNV  160 (382)
T ss_pred             HHHHhhhcceEEecchhhcccCcHHHhcCcchHhHHHHHHHHhcCCCceeEEEeeeeeccccccCCCccccccccccccc
Confidence            8888899999999999876   446778999999999999999888999999999632211                   


Q ss_pred             -CccccchHHHHHHHHHHHHH--hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCC
Q 023205          173 -NYLLQGYYEGKRAAETELLT--RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPP  249 (286)
Q Consensus       173 -~~~~~~y~~sK~~~E~~~~~--~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  249 (286)
                       ..+.++|++|||++|.++++  ..|++++|+|||.+.|+..++.++.+     .++..+.......+.+|.. ....+.
T Consensus       161 ~~~~~~GY~~SKwvaE~Lvr~A~~rGLpv~I~Rpg~I~gds~tG~~n~~-----D~~~Rlv~~~~~lg~~P~~-~~~~~~  234 (382)
T COG3320         161 GQGLAGGYGRSKWVAEKLVREAGDRGLPVTIFRPGYITGDSRTGALNTR-----DFLTRLVLGLLQLGIAPDS-EYSLDM  234 (382)
T ss_pred             cCccCCCcchhHHHHHHHHHHHhhcCCCeEEEecCeeeccCccCccccc-----hHHHHHHHHHHHhCCCCCc-ccchhh
Confidence             12358999999999999987  46899999999999999987776553     3455566666666666643 223334


Q ss_pred             ccHHHHHH
Q 023205          250 VNVTVVAK  257 (286)
Q Consensus       250 i~v~Dva~  257 (286)
                      ++++++++
T Consensus       235 ~p~~~v~~  242 (382)
T COG3320         235 LPVDHVAR  242 (382)
T ss_pred             CccceeeE
Confidence            44444333

>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]

Probab=99.95  E-value=8.1e-27  Score=188.37  Aligned_cols=216  Identities=18%  Similarity=0.181  Sum_probs=172.1

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHC--CCeEEEEecC---CC--cccccccCCceeEEeccCCCHhHHHHHhc--CCCEEEE
Q 023205           57 EKLLVLGGNGFVGSHICREALDR--GLTVASLSRS---GR--SSLRDSWANNVIWHQGNLLSSDSWKEALD--GVTAVIS  127 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~--g~~V~~l~R~---~~--~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~--~~d~vi~  127 (286)
                      ++|+|||+.||||++.+..+...  .++.++++-=   ..  ........++.+++++|+.+...+..++.  .+|.|+|
T Consensus         7 ~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~~~~l~~~~n~p~ykfv~~di~~~~~~~~~~~~~~id~vih   86 (331)
T KOG0747|consen    7 KNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSNLKNLEPVRNSPNYKFVEGDIADADLVLYLFETEEIDTVIH   86 (331)
T ss_pred             ceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccccchhhhhccCCCceEeeccccchHHHHhhhccCchhhhhh
Confidence            68999999999999999999986  3555555431   11  11122346799999999999988887775  6899999


Q ss_pred             ccccCC------CcchhhhhhhHHHHHHHHHHHHc-CCCEEEEEec-CCcCCCC-----------ccccchHHHHHHHHH
Q 023205          128 CVGGFG------SNSYMYKINGTANINAIRAASEK-GVKRFVYISA-ADFGVAN-----------YLLQGYYEGKRAAET  188 (286)
Q Consensus       128 ~a~~~~------~~~~~~~~~~~~~~~l~~~a~~~-~v~~~v~~Ss-~~~~~~~-----------~~~~~y~~sK~~~E~  188 (286)
                      .|+...      ++-.+...|+.++..|+++++.. ++++||++|| .+||+..           .|.++|+++|+++|.
T Consensus        87 faa~t~vd~s~~~~~~~~~nnil~t~~Lle~~~~sg~i~~fvhvSTdeVYGds~~~~~~~E~s~~nPtnpyAasKaAaE~  166 (331)
T KOG0747|consen   87 FAAQTHVDRSFGDSFEFTKNNILSTHVLLEAVRVSGNIRRFVHVSTDEVYGDSDEDAVVGEASLLNPTNPYAASKAAAEM  166 (331)
T ss_pred             hHhhhhhhhhcCchHHHhcCCchhhhhHHHHHHhccCeeEEEEecccceecCccccccccccccCCCCCchHHHHHHHHH
Confidence            998653      34466688999999999999988 5899999999 5677543           367899999999999


Q ss_pred             HHHH---hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCc--cCCCccHHHHHHHHHHHh
Q 023205          189 ELLT---RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPL--FTPPVNVTVVAKVAVRAA  263 (286)
Q Consensus       189 ~~~~---~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--~~~~i~v~Dva~~~~~~l  263 (286)
                      .++.   ..|++++++|.++||||.+....         .+..++.......+.+..|++  .++|++++|+++++-.++
T Consensus       167 ~v~Sy~~sy~lpvv~~R~nnVYGP~q~~~k---------lipkFi~l~~~~~~~~i~g~g~~~rs~l~veD~~ea~~~v~  237 (331)
T KOG0747|consen  167 LVRSYGRSYGLPVVTTRMNNVYGPNQYPEK---------LIPKFIKLAMRGKEYPIHGDGLQTRSYLYVEDVSEAFKAVL  237 (331)
T ss_pred             HHHHHhhccCCcEEEEeccCccCCCcChHH---------HhHHHHHHHHhCCCcceecCcccceeeEeHHHHHHHHHHHH
Confidence            8764   68999999999999999885442         334455656667778877776  789999999999999999


Q ss_pred             cCCCCCCCeeEeccccccc
Q 023205          264 TDPVFPPGIVDVHGILRYS  282 (286)
Q Consensus       264 ~~~~~~~~~~~l~~~~~~s  282 (286)
                      ++.+ .|++|||+...+.+
T Consensus       238 ~Kg~-~geIYNIgtd~e~~  255 (331)
T KOG0747|consen  238 EKGE-LGEIYNIGTDDEMR  255 (331)
T ss_pred             hcCC-ccceeeccCcchhh
Confidence            9854 59999999877654

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.95  E-value=3.6e-26  Score=201.63  Aligned_cols=211  Identities=21%  Similarity=0.208  Sum_probs=179.5

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCC-CeEEEEecCCCcccc------cc-cCCceeEEeccCCCHhHHHHHhcC--CCE
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRG-LTVASLSRSGRSSLR------DS-WANNVIWHQGNLLSSDSWKEALDG--VTA  124 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g-~~V~~l~R~~~~~~~------~~-~~~~~~~i~~Dl~d~~~~~~~~~~--~d~  124 (286)
                      ..|+||||||+|.+|+.+++++++.+ .+++.++|++.+...      .. ...++.++.||+.|.+.+++++++  +|+
T Consensus       249 ~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~kvd~  328 (588)
T COG1086         249 TGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGHKVDI  328 (588)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcCCCce
Confidence            47899999999999999999999987 589999998765311      11 136899999999999999999998  999


Q ss_pred             EEEccccCC------CcchhhhhhhHHHHHHHHHHHHcCCCEEEEEecCCcCCCCccccchHHHHHHHHHHHHHh----C
Q 023205          125 VISCVGGFG------SNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLTR----Y  194 (286)
Q Consensus       125 vi~~a~~~~------~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~~~----~  194 (286)
                      |||+|+.-+      ++.+..+.|+.|+.|++++|.++++++||++||   .+.-+|.|.||.+|..+|+++...    .
T Consensus       329 VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~~V~~~V~iST---DKAV~PtNvmGaTKr~aE~~~~a~~~~~~  405 (588)
T COG1086         329 VFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKNGVKKFVLIST---DKAVNPTNVMGATKRLAEKLFQAANRNVS  405 (588)
T ss_pred             EEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHhCCCEEEEEec---CcccCCchHhhHHHHHHHHHHHHHhhccC
Confidence            999998642      566888999999999999999999999999999   566678899999999999988752    2


Q ss_pred             --CCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCc-cCCCccHHHHHHHHHHHhcCCCCCCC
Q 023205          195 --PYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPL-FTPPVNVTVVAKVAVRAATDPVFPPG  271 (286)
Q Consensus       195 --g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~i~v~Dva~~~~~~l~~~~~~~~  271 (286)
                        +..++++|.|+|.|..            |+.++.+.+.+..++++++..+. .+-|+++.|.++.++++....+ .|+
T Consensus       406 ~~~T~f~~VRFGNVlGSr------------GSViPlFk~QI~~GgplTvTdp~mtRyfMTI~EAv~LVlqA~a~~~-gGe  472 (588)
T COG1086         406 GTGTRFCVVRFGNVLGSR------------GSVIPLFKKQIAEGGPLTVTDPDMTRFFMTIPEAVQLVLQAGAIAK-GGE  472 (588)
T ss_pred             CCCcEEEEEEecceecCC------------CCCHHHHHHHHHcCCCccccCCCceeEEEEHHHHHHHHHHHHhhcC-CCc
Confidence              4789999999999987            56889999999999999976444 6779999999999999987744 478


Q ss_pred             eeEecccccc
Q 023205          272 IVDVHGILRY  281 (286)
Q Consensus       272 ~~~l~~~~~~  281 (286)
                      +|-+.-++++
T Consensus       473 ifvldMGepv  482 (588)
T COG1086         473 IFVLDMGEPV  482 (588)
T ss_pred             EEEEcCCCCe
Confidence            8887665543

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=99.95  E-value=3e-26  Score=195.64  Aligned_cols=196  Identities=24%  Similarity=0.225  Sum_probs=148.7

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHh------cC-CCEEEEccc
Q 023205           58 KLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEAL------DG-VTAVISCVG  130 (286)
Q Consensus        58 ~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~------~~-~d~vi~~a~  130 (286)
                      +|+||||||++|++++++|+++|++|++++|++++..    ..+++.+.+|+.|++.+.+++      ++ +|.|||+++
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~----~~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d~v~~~~~   76 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSA----GPNEKHVKFDWLDEDTWDNPFSSDDGMEPEISAVYLVAP   76 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc----CCCCccccccCCCHHHHHHHHhcccCcCCceeEEEEeCC
Confidence            4899999999999999999999999999999976532    247788899999999999998      67 999999987


Q ss_pred             cCCCcchhhhhhhHHHHHHHHHHHHcCCCEEEEEecCCcCCCCccccchHHHHHHHHHHHHHhCCCcEEEEeeCeeecCC
Q 023205          131 GFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLTRYPYGGVILRPGFIYGTR  210 (286)
Q Consensus       131 ~~~~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~~~~g~~~~ilRp~~v~g~~  210 (286)
                      .....       .....+++++|+++|++|||++||......       ...+...|+++.+..|++++++||++++++.
T Consensus        77 ~~~~~-------~~~~~~~i~aa~~~gv~~~V~~Ss~~~~~~-------~~~~~~~~~~l~~~~gi~~tilRp~~f~~~~  142 (285)
T TIGR03649        77 PIPDL-------APPMIKFIDFARSKGVRRFVLLSASIIEKG-------GPAMGQVHAHLDSLGGVEYTVLRPTWFMENF  142 (285)
T ss_pred             CCCCh-------hHHHHHHHHHHHHcCCCEEEEeeccccCCC-------CchHHHHHHHHHhccCCCEEEEeccHHhhhh
Confidence            53211       234568899999999999999998532111       1234556776766469999999999998653


Q ss_pred             CCCccccCccccCchHHHHHHhcccCCCCC-CCCCccCCCccHHHHHHHHHHHhcCCCCCCCeeEecccccccccC
Q 023205          211 TVGGMKLPLGVIGSPMEMVLQHAKPLSQLP-LVGPLFTPPVNVTVVAKVAVRAATDPVFPPGIVDVHGILRYSQKS  285 (286)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~l~~~~~~s~~~  285 (286)
                      ....              ........+.+. ..|+..++||+++|+|++++.++.++...++.|++.+|+.+|+++
T Consensus       143 ~~~~--------------~~~~~~~~~~~~~~~g~~~~~~v~~~Dva~~~~~~l~~~~~~~~~~~l~g~~~~s~~e  204 (285)
T TIGR03649       143 SEEF--------------HVEAIRKENKIYSATGDGKIPFVSADDIARVAYRALTDKVAPNTDYVVLGPELLTYDD  204 (285)
T ss_pred             cccc--------------cccccccCCeEEecCCCCccCcccHHHHHHHHHHHhcCCCcCCCeEEeeCCccCCHHH
Confidence            1110              011111112222 336778999999999999999999887768999999999988753

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.94  E-value=7.4e-25  Score=183.66  Aligned_cols=198  Identities=23%  Similarity=0.277  Sum_probs=148.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccc-cCCceeEEeccCCC-HhHHHHHh-cCCCEEEEccccC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDS-WANNVIWHQGNLLS-SDSWKEAL-DGVTAVISCVGGF  132 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~-~~~~~~~i~~Dl~d-~~~~~~~~-~~~d~vi~~a~~~  132 (286)
                      +|+|+||||+|++|++++++|+++|++|+++.|+.++..... ...+++++++|++| .+.+.+.+ .++|+|||+++..
T Consensus        17 ~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d~~~~l~~~~~~~~d~vi~~~g~~   96 (251)
T PLN00141         17 TKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLPQDPSLQIVRADVTEGSDKLVEAIGDDSDAVICATGFR   96 (251)
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcccCCceEEEEeeCCCCHHHHHHHhhcCCCEEEECCCCC
Confidence            579999999999999999999999999999999876522111 12468999999998 46777777 6899999998864


Q ss_pred             C--CcchhhhhhhHHHHHHHHHHHHcCCCEEEEEecC-CcCCCC-cc----------ccchHHHHHHHHHHHHHhCCCcE
Q 023205          133 G--SNSYMYKINGTANINAIRAASEKGVKRFVYISAA-DFGVAN-YL----------LQGYYEGKRAAETELLTRYPYGG  198 (286)
Q Consensus       133 ~--~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~-~~~~~~-~~----------~~~y~~sK~~~E~~~~~~~g~~~  198 (286)
                      .  .....+++|..++.++++++++.++++||++||. .|+... .+          ...|...|..+|+++++ .|+++
T Consensus        97 ~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~~v~g~~~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-~gi~~  175 (251)
T PLN00141         97 RSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSILVNGAAMGQILNPAYIFLNLFGLTLVAKLQAEKYIRK-SGINY  175 (251)
T ss_pred             cCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEccccccCCCcccccCcchhHHHHHHHHHHHHHHHHHHHHh-cCCcE
Confidence            2  2223456788899999999999999999999995 344221 11          12234568888887665 78999


Q ss_pred             EEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCC-ccCCCccHHHHHHHHHHHhcCCCCCCCeeEecc
Q 023205          199 VILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGP-LFTPPVNVTVVAKVAVRAATDPVFPPGIVDVHG  277 (286)
Q Consensus       199 ~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~l~~  277 (286)
                      +++||++++++...+...                      + ..++ ....+|+++|+|+++.+++..+...+.++.+.+
T Consensus       176 ~iirpg~~~~~~~~~~~~----------------------~-~~~~~~~~~~i~~~dvA~~~~~~~~~~~~~~~~~~~~~  232 (251)
T PLN00141        176 TIVRPGGLTNDPPTGNIV----------------------M-EPEDTLYEGSISRDQVAEVAVEALLCPESSYKVVEIVA  232 (251)
T ss_pred             EEEECCCccCCCCCceEE----------------------E-CCCCccccCcccHHHHHHHHHHHhcChhhcCcEEEEec
Confidence            999999999764321100                      0 0011 123579999999999999998887678888876

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=99.94  E-value=2e-25  Score=184.35  Aligned_cols=227  Identities=20%  Similarity=0.235  Sum_probs=169.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCccc------cccc--CCceeEEeccCCCHhHHHHHhcC--CCEE
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSL------RDSW--ANNVIWHQGNLLSSDSWKEALDG--VTAV  125 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~------~~~~--~~~~~~i~~Dl~d~~~~~~~~~~--~d~v  125 (286)
                      .++||||||+||||+|++-+|+++|+.|.+++.=.....      .+..  ..++.++++|++|.+.++++|+.  +|.|
T Consensus         2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~~fd~V   81 (343)
T KOG1371|consen    2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEVKFDAV   81 (343)
T ss_pred             CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhcCCceE
Confidence            468999999999999999999999999999886432211      1112  36899999999999999999974  7999


Q ss_pred             EEccccC------CCcchhhhhhhHHHHHHHHHHHHcCCCEEEEEecC-CcCCCC-----------ccccchHHHHHHHH
Q 023205          126 ISCVGGF------GSNSYMYKINGTANINAIRAASEKGVKRFVYISAA-DFGVAN-----------YLLQGYYEGKRAAE  187 (286)
Q Consensus       126 i~~a~~~------~~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~-~~~~~~-----------~~~~~y~~sK~~~E  187 (286)
                      +|.|+.-      .++...+..|+.|+.++++.+++.+++.+||.||+ +||.+.           .|.++|+.+|..+|
T Consensus        82 ~Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~~~~~V~sssatvYG~p~~ip~te~~~t~~p~~pyg~tK~~iE  161 (343)
T KOG1371|consen   82 MHFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAHNVKALVFSSSATVYGLPTKVPITEEDPTDQPTNPYGKTKKAIE  161 (343)
T ss_pred             EeehhhhccchhhhCchhheehhhhhHHHHHHHHHHcCCceEEEecceeeecCcceeeccCcCCCCCCCCcchhhhHHHH
Confidence            9999853      35566778999999999999999999999999995 676543           26789999999999


Q ss_pred             HHHHH---hCCCcEEEEeeCeeec--CCCCCcccc---CccccCchHHHHHHh----cccCCCCC-CCCCccCCCccHHH
Q 023205          188 TELLT---RYPYGGVILRPGFIYG--TRTVGGMKL---PLGVIGSPMEMVLQH----AKPLSQLP-LVGPLFTPPVNVTV  254 (286)
Q Consensus       188 ~~~~~---~~g~~~~ilRp~~v~g--~~~~~~~~~---~~~~~~~~~~~~~~~----~~~~~~~~-~~g~~~~~~i~v~D  254 (286)
                      +++..   ..++.++.||...++|  |+.......   |...++...+.....    ......++ .+|+..++.+++-|
T Consensus       162 ~i~~d~~~~~~~~~~~LRyfn~~ga~p~Gr~ge~p~~~~nnl~p~v~~vaigr~~~l~v~g~d~~t~dgt~vrdyi~v~D  241 (343)
T KOG1371|consen  162 EIIHDYNKAYGWKVTGLRYFNVIGAHPSGRIGEAPLGIPNNLLPYVFQVAIGRRPNLQVVGRDYTTIDGTIVRDYIHVLD  241 (343)
T ss_pred             HHHHhhhccccceEEEEEeccccCccccCccCCCCccCcccccccccchhhcccccceeecCcccccCCCeeecceeeEe
Confidence            98875   4569999999999999  443222211   111121111221111    11123333 45677899999999


Q ss_pred             HHHHHHHHhcCCCC--CCCeeEeccccccc
Q 023205          255 VAKVAVRAATDPVF--PPGIVDVHGILRYS  282 (286)
Q Consensus       255 va~~~~~~l~~~~~--~~~~~~l~~~~~~s  282 (286)
                      +|+..+.++.+...  .-++||++.....+
T Consensus       242 la~~h~~al~k~~~~~~~~i~Nlgtg~g~~  271 (343)
T KOG1371|consen  242 LADGHVAALGKLRGAAEFGVYNLGTGKGSS  271 (343)
T ss_pred             hHHHHHHHhhccccchheeeEeecCCCCcc
Confidence            99999999987653  34599998766543

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=99.94  E-value=4e-25  Score=224.76  Aligned_cols=224  Identities=24%  Similarity=0.336  Sum_probs=167.6

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCC----CeEEEEecCCCcccc---------------cccCCceeEEeccCCC----
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRG----LTVASLSRSGRSSLR---------------DSWANNVIWHQGNLLS----  111 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g----~~V~~l~R~~~~~~~---------------~~~~~~~~~i~~Dl~d----  111 (286)
                      ..++|+|||||||+|++++++|++++    ++|+|+.|.......               .....+++++.+|+.+    
T Consensus       970 ~~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lg 1049 (1389)
T TIGR03443       970 TPITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFG 1049 (1389)
T ss_pred             CCceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCC
Confidence            35789999999999999999999987    799999997543211               0112479999999964    


Q ss_pred             --HhHHHHHhcCCCEEEEccccCCCc---chhhhhhhHHHHHHHHHHHHcCCCEEEEEecC-CcCC--------------
Q 023205          112 --SDSWKEALDGVTAVISCVGGFGSN---SYMYKINGTANINAIRAASEKGVKRFVYISAA-DFGV--------------  171 (286)
Q Consensus       112 --~~~~~~~~~~~d~vi~~a~~~~~~---~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~-~~~~--------------  171 (286)
                        .+.+.++..++|+|||+|+..+..   ......|+.|+.+++++|++.++++|+|+||. +|+.              
T Consensus      1050 l~~~~~~~l~~~~d~iiH~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~vSS~~v~~~~~~~~~~~~~~~~~ 1129 (1389)
T TIGR03443      1050 LSDEKWSDLTNEVDVIIHNGALVHWVYPYSKLRDANVIGTINVLNLCAEGKAKQFSFVSSTSALDTEYYVNLSDELVQAG 1129 (1389)
T ss_pred             cCHHHHHHHHhcCCEEEECCcEecCccCHHHHHHhHHHHHHHHHHHHHhCCCceEEEEeCeeecCcccccchhhhhhhcc
Confidence              466777888999999999987532   23345799999999999999999999999994 3321              


Q ss_pred             ----CC---------ccccchHHHHHHHHHHHHH--hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccC
Q 023205          172 ----AN---------YLLQGYYEGKRAAETELLT--RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPL  236 (286)
Q Consensus       172 ----~~---------~~~~~y~~sK~~~E~~~~~--~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (286)
                          .+         .+.++|+++|+.+|.++.+  ..|++++++|||.++|+...+.+..     ..++..+.......
T Consensus      1130 ~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~~g~~~~i~Rpg~v~G~~~~g~~~~-----~~~~~~~~~~~~~~ 1204 (1389)
T TIGR03443      1130 GAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGKRGLRGCIVRPGYVTGDSKTGATNT-----DDFLLRMLKGCIQL 1204 (1389)
T ss_pred             CCCCCcccccccccccCCCChHHHHHHHHHHHHHHHhCCCCEEEECCCccccCCCcCCCCc-----hhHHHHHHHHHHHh
Confidence                00         1235799999999998875  3689999999999999976554322     22334444443344


Q ss_pred             CCCCCCCCccCCCccHHHHHHHHHHHhcCCCC--CCCeeEeccccccccc
Q 023205          237 SQLPLVGPLFTPPVNVTVVAKVAVRAATDPVF--PPGIVDVHGILRYSQK  284 (286)
Q Consensus       237 ~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~~~--~~~~~~l~~~~~~s~~  284 (286)
                      +.+|. +...++|++++|+|++++.++..+..  .+.+||+.++..++|.
T Consensus      1205 ~~~p~-~~~~~~~~~Vddva~ai~~~~~~~~~~~~~~i~~~~~~~~~~~~ 1253 (1389)
T TIGR03443      1205 GLIPN-INNTVNMVPVDHVARVVVAAALNPPKESELAVAHVTGHPRIRFN 1253 (1389)
T ss_pred             CCcCC-CCCccccccHHHHHHHHHHHHhCCcccCCCCEEEeCCCCCCcHH
Confidence            44443 24468999999999999999876542  3468999999887774

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.93  E-value=1.6e-24  Score=195.32  Aligned_cols=208  Identities=24%  Similarity=0.227  Sum_probs=154.8

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCccccc---c-----------cCCceeEEeccCCCHhHHHHH
Q 023205           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRD---S-----------WANNVIWHQGNLLSSDSWKEA  118 (286)
Q Consensus        53 ~~~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~---~-----------~~~~~~~i~~Dl~d~~~~~~~  118 (286)
                      ..+.++|+||||+|+||++++++|+++|++|++++|+.++....   .           ...+++++++|+.|.+++.++
T Consensus        77 ~~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~a  156 (576)
T PLN03209         77 TKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPA  156 (576)
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHH
Confidence            33567899999999999999999999999999999987652110   0           013588999999999999999


Q ss_pred             hcCCCEEEEccccCCC----cchhhhhhhHHHHHHHHHHHHcCCCEEEEEecCCcCCCC------ccccchHHHHHHHHH
Q 023205          119 LDGVTAVISCVGGFGS----NSYMYKINGTANINAIRAASEKGVKRFVYISAADFGVAN------YLLQGYYEGKRAAET  188 (286)
Q Consensus       119 ~~~~d~vi~~a~~~~~----~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~~~~~~~------~~~~~y~~sK~~~E~  188 (286)
                      +.++|+||||+|....    ....+++|+.++.++++++++.+++|||++||.......      .....|...|..+|+
T Consensus       157 LggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSiga~~~g~p~~~~~sk~~~~~~KraaE~  236 (576)
T PLN03209        157 LGNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSLGTNKVGFPAAILNLFWGVLCWKRKAEE  236 (576)
T ss_pred             hcCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccchhcccCccccchhhHHHHHHHHHHHHH
Confidence            9999999999987532    234567899999999999999999999999996321111      123567788999999


Q ss_pred             HHHHhCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcCCC-
Q 023205          189 ELLTRYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDPV-  267 (286)
Q Consensus       189 ~~~~~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~~-  267 (286)
                      .+.+ .|++|++||||++.++...... .     ..    +   .     ....+......+..+|||++++.++.++. 
T Consensus       237 ~L~~-sGIrvTIVRPG~L~tp~d~~~~-t-----~~----v---~-----~~~~d~~~gr~isreDVA~vVvfLasd~~a  297 (576)
T PLN03209        237 ALIA-SGLPYTIVRPGGMERPTDAYKE-T-----HN----L---T-----LSEEDTLFGGQVSNLQVAELMACMAKNRRL  297 (576)
T ss_pred             HHHH-cCCCEEEEECCeecCCcccccc-c-----cc----e---e-----eccccccCCCccCHHHHHHHHHHHHcCchh
Confidence            7765 8999999999999876432100 0     00    0   0     00000112246899999999999998665 


Q ss_pred             CCCCeeEecccc
Q 023205          268 FPPGIVDVHGIL  279 (286)
Q Consensus       268 ~~~~~~~l~~~~  279 (286)
                      ..+++|.+....
T Consensus       298 s~~kvvevi~~~  309 (576)
T PLN03209        298 SYCKVVEVIAET  309 (576)
T ss_pred             ccceEEEEEeCC
Confidence            568899987753

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=99.93  E-value=1.2e-24  Score=186.17  Aligned_cols=207  Identities=19%  Similarity=0.191  Sum_probs=141.6

Q ss_pred             EEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccccCCC----
Q 023205           59 LLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFGS----  134 (286)
Q Consensus        59 VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~~~~----  134 (286)
                      ||||||+||||+++++.|+++|++|++++|+..+.... ....  +  .|+.. +.+.+.+.++|+|||+|+....    
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~--~--~~~~~-~~~~~~~~~~D~Vvh~a~~~~~~~~~   74 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANT-KWEG--Y--KPWAP-LAESEALEGADAVINLAGEPIADKRW   74 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCcc-ccee--e--ecccc-cchhhhcCCCCEEEECCCCCcccccC
Confidence            69999999999999999999999999999987653211 1111  1  12222 4456678899999999986432    


Q ss_pred             ----cchhhhhhhHHHHHHHHHHHHcCCC--EEEEEecC-CcCCCC----------ccccchHHHHHHHHHHHHH--hCC
Q 023205          135 ----NSYMYKINGTANINAIRAASEKGVK--RFVYISAA-DFGVAN----------YLLQGYYEGKRAAETELLT--RYP  195 (286)
Q Consensus       135 ----~~~~~~~~~~~~~~l~~~a~~~~v~--~~v~~Ss~-~~~~~~----------~~~~~y~~sK~~~E~~~~~--~~g  195 (286)
                          ....++.|+.++.+++++|++.+++  +||+.|+. .|+...          .+...|+..+...|+.+..  ..+
T Consensus        75 ~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~i~~S~~~~yg~~~~~~~~E~~~~~~~~~~~~~~~~~e~~~~~~~~~~  154 (292)
T TIGR01777        75 TEERKQEIRDSRIDTTRALVEAIAAAEQKPKVFISASAVGYYGTSEDRVFTEEDSPAGDDFLAELCRDWEEAAQAAEDLG  154 (292)
T ss_pred             CHHHHHHHHhcccHHHHHHHHHHHhcCCCceEEEEeeeEEEeCCCCCCCcCcccCCCCCChHHHHHHHHHHHhhhchhcC
Confidence                1245678999999999999999874  45555553 355321          0112345556666665542  468


Q ss_pred             CcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhccc-CCCCCCCCCccCCCccHHHHHHHHHHHhcCCCCCCCeeE
Q 023205          196 YGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKP-LSQLPLVGPLFTPPVNVTVVAKVAVRAATDPVFPPGIVD  274 (286)
Q Consensus       196 ~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~  274 (286)
                      ++++++||+.+||+...            ....+...... .......++..+++|+++|+|+++..+++.+.. +++||
T Consensus       155 ~~~~ilR~~~v~G~~~~------------~~~~~~~~~~~~~~~~~g~~~~~~~~i~v~Dva~~i~~~l~~~~~-~g~~~  221 (292)
T TIGR01777       155 TRVVLLRTGIVLGPKGG------------ALAKMLPPFRLGLGGPLGSGRQWFSWIHIEDLVQLILFALENASI-SGPVN  221 (292)
T ss_pred             CceEEEeeeeEECCCcc------------hhHHHHHHHhcCcccccCCCCcccccEeHHHHHHHHHHHhcCccc-CCceE
Confidence            99999999999998531            11111111111 111122356688999999999999999987654 57999


Q ss_pred             eccccccccc
Q 023205          275 VHGILRYSQK  284 (286)
Q Consensus       275 l~~~~~~s~~  284 (286)
                      +++++.+++.
T Consensus       222 ~~~~~~~s~~  231 (292)
T TIGR01777       222 ATAPEPVRNK  231 (292)
T ss_pred             ecCCCccCHH
Confidence            9999888764

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>PLN02778 3,5-epimerase/4-reductase

Probab=99.93  E-value=2.2e-24  Score=184.94  Aligned_cols=192  Identities=16%  Similarity=0.202  Sum_probs=137.5

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhc--CCCEEEEccccC
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD--GVTAVISCVGGF  132 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~--~~d~vi~~a~~~  132 (286)
                      +.|+||||||+||||++|++.|+++|++|+...                   +|+.|.+.+...++  ++|+|||+||..
T Consensus         8 ~~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~-------------------~~~~~~~~v~~~l~~~~~D~ViH~Aa~~   68 (298)
T PLN02778          8 ATLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGS-------------------GRLENRASLEADIDAVKPTHVFNAAGVT   68 (298)
T ss_pred             CCCeEEEECCCCHHHHHHHHHHHhCCCEEEEec-------------------CccCCHHHHHHHHHhcCCCEEEECCccc
Confidence            457899999999999999999999999987532                   24555666666665  689999999976


Q ss_pred             CC---------cchhhhhhhHHHHHHHHHHHHcCCCEEEEEecCCcCC------------C-C----ccccchHHHHHHH
Q 023205          133 GS---------NSYMYKINGTANINAIRAASEKGVKRFVYISAADFGV------------A-N----YLLQGYYEGKRAA  186 (286)
Q Consensus       133 ~~---------~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~~~~~------------~-~----~~~~~y~~sK~~~  186 (286)
                      ..         +...+++|+.++.+++++|++.+++++++.|+.+|+.            . +    .+.+.|+.+|..+
T Consensus        69 ~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~gv~~v~~sS~~vy~~~~~~p~~~~~~~~Ee~~p~~~~s~Yg~sK~~~  148 (298)
T PLN02778         69 GRPNVDWCESHKVETIRANVVGTLTLADVCRERGLVLTNYATGCIFEYDDAHPLGSGIGFKEEDTPNFTGSFYSKTKAMV  148 (298)
T ss_pred             CCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEecceEeCCCCCCCcccCCCCCcCCCCCCCCCchHHHHHHH
Confidence            31         2356789999999999999999997666655554421            1 1    1236899999999


Q ss_pred             HHHHHHhCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcCC
Q 023205          187 ETELLTRYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDP  266 (286)
Q Consensus       187 E~~~~~~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~  266 (286)
                      |.++....  +..++|+...+|+....           ... +.........+...+   .++++++|++++++.+++..
T Consensus       149 E~~~~~y~--~~~~lr~~~~~~~~~~~-----------~~~-fi~~~~~~~~~~~~~---~s~~yv~D~v~al~~~l~~~  211 (298)
T PLN02778        149 EELLKNYE--NVCTLRVRMPISSDLSN-----------PRN-FITKITRYEKVVNIP---NSMTILDELLPISIEMAKRN  211 (298)
T ss_pred             HHHHHHhh--ccEEeeecccCCccccc-----------HHH-HHHHHHcCCCeeEcC---CCCEEHHHHHHHHHHHHhCC
Confidence            99887632  56789998877754211           011 222222222222222   36899999999999999764


Q ss_pred             CCCCCeeEeccccccccc
Q 023205          267 VFPPGIVDVHGILRYSQK  284 (286)
Q Consensus       267 ~~~~~~~~l~~~~~~s~~  284 (286)
                      .  +++||+++++.+|+.
T Consensus       212 ~--~g~yNigs~~~iS~~  227 (298)
T PLN02778        212 L--TGIYNFTNPGVVSHN  227 (298)
T ss_pred             C--CCeEEeCCCCcccHH
Confidence            3  469999999988764

>PRK12320 hypothetical protein; Provisional

Probab=99.93  E-value=1.8e-24  Score=200.37  Aligned_cols=193  Identities=19%  Similarity=0.146  Sum_probs=145.5

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccccCCCcc
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFGSNS  136 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~~~~~~  136 (286)
                      |+||||||+||||++++++|+++|++|++++|.+...    ...+++++++|+.|+. +.+++.++|+|||+|+....  
T Consensus         1 MkILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~----~~~~ve~v~~Dl~d~~-l~~al~~~D~VIHLAa~~~~--   73 (699)
T PRK12320          1 MQILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDA----LDPRVDYVCASLRNPV-LQELAGEADAVIHLAPVDTS--   73 (699)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhhc----ccCCceEEEccCCCHH-HHHHhcCCCEEEEcCccCcc--
Confidence            4799999999999999999999999999999875431    2347899999999985 78888999999999986432  


Q ss_pred             hhhhhhhHHHHHHHHHHHHcCCCEEEEEecCCcCCCCccccchHHHHHHHHHHHHHhCCCcEEEEeeCeeecCCCCCccc
Q 023205          137 YMYKINGTANINAIRAASEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLTRYPYGGVILRPGFIYGTRTVGGMK  216 (286)
Q Consensus       137 ~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~~~~g~~~~ilRp~~v~g~~~~~~~~  216 (286)
                      ....+|+.++.|++++|++.++ ++||+||. +|..    ..|.    .+|.++.. .+++++++|++++||+...... 
T Consensus        74 ~~~~vNv~Gt~nLleAA~~~Gv-RiV~~SS~-~G~~----~~~~----~aE~ll~~-~~~p~~ILR~~nVYGp~~~~~~-  141 (699)
T PRK12320         74 APGGVGITGLAHVANAAARAGA-RLLFVSQA-AGRP----ELYR----QAETLVST-GWAPSLVIRIAPPVGRQLDWMV-  141 (699)
T ss_pred             chhhHHHHHHHHHHHHHHHcCC-eEEEEECC-CCCC----cccc----HHHHHHHh-cCCCEEEEeCceecCCCCcccH-
Confidence            2235899999999999999998 79999985 3432    1233    47776654 6789999999999998543210 


Q ss_pred             cCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcCCCCCCCeeEeccccccccc
Q 023205          217 LPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDPVFPPGIVDVHGILRYSQK  284 (286)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~l~~~~~~s~~  284 (286)
                            ..++..+......        +..+.+||++|++++++.+++.+.  +++|||++++.+|..
T Consensus       142 ------~r~I~~~l~~~~~--------~~pI~vIyVdDvv~alv~al~~~~--~GiyNIG~~~~~Si~  193 (699)
T PRK12320        142 ------CRTVATLLRSKVS--------ARPIRVLHLDDLVRFLVLALNTDR--NGVVDLATPDTTNVV  193 (699)
T ss_pred             ------hHHHHHHHHHHHc--------CCceEEEEHHHHHHHHHHHHhCCC--CCEEEEeCCCeeEHH
Confidence                  1222333222211        222335899999999999997643  459999999988764

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=99.92  E-value=9.5e-24  Score=170.70  Aligned_cols=213  Identities=24%  Similarity=0.286  Sum_probs=173.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCccccccc----CCceeEEeccCCCHhHHHHHhcCCCEEEEcccc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSW----ANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG  131 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~----~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~  131 (286)
                      ...+-|+|||||+|++++.+|.+.|-+|++-.|-.+.......    ...+-+...|+.|+++++++++...+||++.|.
T Consensus        61 GiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~r~lkvmGdLGQvl~~~fd~~DedSIr~vvk~sNVVINLIGr  140 (391)
T KOG2865|consen   61 GIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPRHLKVMGDLGQVLFMKFDLRDEDSIRAVVKHSNVVINLIGR  140 (391)
T ss_pred             ceEEEEecccccccHHHHHHHhhcCCeEEEeccCCccchhheeecccccceeeeccCCCCHHHHHHHHHhCcEEEEeecc
Confidence            4467899999999999999999999999999997654322221    247889999999999999999999999999986


Q ss_pred             CC--CcchhhhhhhHHHHHHHHHHHHcCCCEEEEEecCCcCCCCccccchHHHHHHHHHHHHHhCCCcEEEEeeCeeecC
Q 023205          132 FG--SNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLTRYPYGGVILRPGFIYGT  209 (286)
Q Consensus       132 ~~--~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~~~~g~~~~ilRp~~v~g~  209 (286)
                      --  .+-.+.++|+.+...+++.|++.|+.+||++|+.+  ..-...+-|-.+|.++|..+++++. +.+|+||..+||.
T Consensus       141 d~eTknf~f~Dvn~~~aerlAricke~GVerfIhvS~Lg--anv~s~Sr~LrsK~~gE~aVrdafP-eAtIirPa~iyG~  217 (391)
T KOG2865|consen  141 DYETKNFSFEDVNVHIAERLARICKEAGVERFIHVSCLG--ANVKSPSRMLRSKAAGEEAVRDAFP-EATIIRPADIYGT  217 (391)
T ss_pred             ccccCCcccccccchHHHHHHHHHHhhChhheeehhhcc--ccccChHHHHHhhhhhHHHHHhhCC-cceeechhhhccc
Confidence            42  23456789999999999999999999999999964  2233456799999999999998775 8899999999998


Q ss_pred             CCCCccccCccccCchHHHHHHhcccCCCCCCCCCc---cCCCccHHHHHHHHHHHhcCCCCCCCeeEecccccccc
Q 023205          210 RTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPL---FTPPVNVTVVAKVAVRAATDPVFPPGIVDVHGILRYSQ  283 (286)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~---~~~~i~v~Dva~~~~~~l~~~~~~~~~~~l~~~~~~s~  283 (286)
                      .+.            +++.+...-+..+.+|+.+.+   .-.+|++-|||++|+.++++|...|++|..+||..+.-
T Consensus       218 eDr------------fln~ya~~~rk~~~~pL~~~GekT~K~PVyV~DVaa~IvnAvkDp~s~Gktye~vGP~~yql  282 (391)
T KOG2865|consen  218 EDR------------FLNYYASFWRKFGFLPLIGKGEKTVKQPVYVVDVAAAIVNAVKDPDSMGKTYEFVGPDRYQL  282 (391)
T ss_pred             chh------------HHHHHHHHHHhcCceeeecCCcceeeccEEEehHHHHHHHhccCccccCceeeecCCchhhH
Confidence            652            333333333336677766544   45799999999999999999999999999999987653

>PLN02503 fatty acyl-CoA reductase 2

Probab=99.92  E-value=1.3e-23  Score=192.75  Aligned_cols=226  Identities=17%  Similarity=0.130  Sum_probs=159.9

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCC---eEEEEecCCCcccc------cc--------------------cCCceeEE
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGL---TVASLSRSGRSSLR------DS--------------------WANNVIWH  105 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~---~V~~l~R~~~~~~~------~~--------------------~~~~~~~i  105 (286)
                      ..++|||||||||+|++|++.|++.+.   +|+++.|..+....      +.                    ...++.++
T Consensus       118 ~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~v  197 (605)
T PLN02503        118 RGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVPV  197 (605)
T ss_pred             cCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEEE
Confidence            467999999999999999999998753   78999997643210      00                    02478999


Q ss_pred             eccCCCH------hHHHHHhcCCCEEEEccccCCCc---chhhhhhhHHHHHHHHHHHHc-CCCEEEEEecC-CcCCCC-
Q 023205          106 QGNLLSS------DSWKEALDGVTAVISCVGGFGSN---SYMYKINGTANINAIRAASEK-GVKRFVYISAA-DFGVAN-  173 (286)
Q Consensus       106 ~~Dl~d~------~~~~~~~~~~d~vi~~a~~~~~~---~~~~~~~~~~~~~l~~~a~~~-~v~~~v~~Ss~-~~~~~~-  173 (286)
                      .+|++++      +..+.+.+++|+|||+|+.....   ....++|+.++.+++++|++. ++++|||+||+ +|+... 
T Consensus       198 ~GDl~d~~LGLs~~~~~~L~~~vDiVIH~AA~v~f~~~~~~a~~vNV~GT~nLLelA~~~~~lk~fV~vSTayVyG~~~G  277 (605)
T PLN02503        198 VGNVCESNLGLEPDLADEIAKEVDVIINSAANTTFDERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQVSTAYVNGQRQG  277 (605)
T ss_pred             EeeCCCcccCCCHHHHHHHHhcCCEEEECccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEccCceeecCCCC
Confidence            9999986      45667778899999999987533   456789999999999999886 47899999995 222210 


Q ss_pred             -------------------------------------------------------------------ccccchHHHHHHH
Q 023205          174 -------------------------------------------------------------------YLLQGYYEGKRAA  186 (286)
Q Consensus       174 -------------------------------------------------------------------~~~~~y~~sK~~~  186 (286)
                                                                                         .-++.|..+|..+
T Consensus       278 ~i~E~~y~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~d~~~~~~~~~~~~~~l~~~g~~~~~~~~~pNtYt~TK~lA  357 (605)
T PLN02503        278 RIMEKPFRMGDCIARELGISNSLPHNRPALDIEAEIKLALDSKRHGFQSNSFAQKMKDLGLERAKLYGWQDTYVFTKAMG  357 (605)
T ss_pred             eeeeeecCcccccccccccccccccccccCCHHHHHHHHHHhhhcccchHHHHHHhhhcccchhhhCCCCChHHHHHHHH
Confidence                                                                               0037799999999


Q ss_pred             HHHHHH-hCCCcEEEEeeCeeecCCCCCccccCccccCc---hHHHHHHhccc-CCCCCCCCCccCCCccHHHHHHHHHH
Q 023205          187 ETELLT-RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGS---PMEMVLQHAKP-LSQLPLVGPLFTPPVNVTVVAKVAVR  261 (286)
Q Consensus       187 E~~~~~-~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~---~~~~~~~~~~~-~~~~~~~g~~~~~~i~v~Dva~~~~~  261 (286)
                      |+++.+ ..+++++|+||+.|.+....+-    -+|...   ....+....+. ...++..++...+.|++|.++++++.
T Consensus       358 E~lV~~~~~~LPv~IvRPsiV~st~~eP~----pGw~d~~~~~~p~~~~~g~G~lr~~~~~~~~~~DiVPVD~vvna~i~  433 (605)
T PLN02503        358 EMVINSMRGDIPVVIIRPSVIESTWKDPF----PGWMEGNRMMDPIVLYYGKGQLTGFLADPNGVLDVVPADMVVNATLA  433 (605)
T ss_pred             HHHHHHhcCCCCEEEEcCCEecccccCCc----cccccCccccchhhhheeccceeEEEeCCCeeEeEEeecHHHHHHHH
Confidence            999986 3579999999999955333211    111111   11111111111 12233445668999999999999999


Q ss_pred             HhcC----CCCCCCeeEeccc--cccccc
Q 023205          262 AATD----PVFPPGIVDVHGI--LRYSQK  284 (286)
Q Consensus       262 ~l~~----~~~~~~~~~l~~~--~~~s~~  284 (286)
                      ++..    ....+++||++++  .+++|+
T Consensus       434 a~a~~~~~~~~~~~vYn~ts~~~nP~t~~  462 (605)
T PLN02503        434 AMAKHGGAAKPEINVYQIASSVVNPLVFQ  462 (605)
T ss_pred             HHHhhhcccCCCCCEEEeCCCCCCCeEHH
Confidence            8431    1123689999987  887775

>KOG4288 consensus Predicted oxidoreductase [General function prediction only]

Probab=99.92  E-value=1.9e-24  Score=169.51  Aligned_cols=224  Identities=52%  Similarity=0.859  Sum_probs=203.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccccCCCcc
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFGSNS  136 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~~~~~~  136 (286)
                      ...++.|+.||.|+++++.....++.|-.+.|+..+...+.+...+.+.++|.....-+...+.+...++-+++.+.+..
T Consensus        53 e~tlvlggnpfsgs~vlk~A~~vv~svgilsen~~k~~l~sw~~~vswh~gnsfssn~~k~~l~g~t~v~e~~ggfgn~~  132 (283)
T KOG4288|consen   53 EWTLVLGGNPFSGSEVLKNATNVVHSVGILSENENKQTLSSWPTYVSWHRGNSFSSNPNKLKLSGPTFVYEMMGGFGNII  132 (283)
T ss_pred             HHHhhhcCCCcchHHHHHHHHhhceeeeEeecccCcchhhCCCcccchhhccccccCcchhhhcCCcccHHHhcCccchH
Confidence            36899999999999999999999999999999988877788888999999999877777888899999999999999999


Q ss_pred             hhhhhhhHHHHHHHHHHHHcCCCEEEEEecCCcCCCCccccchHHHHHHHHHHHHHhCCCcEEEEeeCeeecCCCCCccc
Q 023205          137 YMYKINGTANINAIRAASEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLTRYPYGGVILRPGFIYGTRTVGGMK  216 (286)
Q Consensus       137 ~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~~~~g~~~~ilRp~~v~g~~~~~~~~  216 (286)
                      .+.++|.....+.+++++++|+++|+|+|...+|.++....+|...|.++|..+.+.++.+-+++|||++||...-+...
T Consensus       133 ~m~~ing~ani~a~kaa~~~gv~~fvyISa~d~~~~~~i~rGY~~gKR~AE~Ell~~~~~rgiilRPGFiyg~R~v~g~~  212 (283)
T KOG4288|consen  133 LMDRINGTANINAVKAAAKAGVPRFVYISAHDFGLPPLIPRGYIEGKREAEAELLKKFRFRGIILRPGFIYGTRNVGGIK  212 (283)
T ss_pred             HHHHhccHhhHHHHHHHHHcCCceEEEEEhhhcCCCCccchhhhccchHHHHHHHHhcCCCceeeccceeecccccCccc
Confidence            99999999999999999999999999999988888887778999999999999998888999999999999998888888


Q ss_pred             cCccccCchHHHHHHhc-ccCCCCCCCCCccCCCccHHHHHHHHHHHhcCCCCCCCeeEecccccc
Q 023205          217 LPLGVIGSPMEMVLQHA-KPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDPVFPPGIVDVHGILRY  281 (286)
Q Consensus       217 ~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~l~~~~~~  281 (286)
                      .|....++.+++..... +...++|..|+....++.+++||.+.++++++|... +++.|..-...
T Consensus       213 ~pL~~vg~pl~~~~~~a~k~~~kLp~lg~l~~ppvnve~VA~aal~ai~dp~f~-Gvv~i~eI~~~  277 (283)
T KOG4288|consen  213 SPLHTVGEPLEMVLKFALKPLNKLPLLGPLLAPPVNVESVALAALKAIEDPDFK-GVVTIEEIKKA  277 (283)
T ss_pred             ccHHhhhhhHHHHHHhhhchhhcCcccccccCCCcCHHHHHHHHHHhccCCCcC-ceeeHHHHHHH
Confidence            99999999999988887 677899999999999999999999999999999985 67776554443

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.91  E-value=5.7e-23  Score=173.13  Aligned_cols=218  Identities=16%  Similarity=0.087  Sum_probs=150.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc-----cccCCceeEEeccCCCHhHHHHHhc-------CCC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------GVT  123 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~-----~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d  123 (286)
                      ++++|||||+|+||+++++.|+++|++|+++.|++++...     .....++.++++|++|.+.++++++       .+|
T Consensus         7 ~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d   86 (262)
T PRK13394          7 GKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGSVD   86 (262)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            5789999999999999999999999999999998744211     1112357889999999998887765       389


Q ss_pred             EEEEccccCCC----------cchhhhhhhHH----HHHHHHHH-HHcCCCEEEEEecCCcCCCCccccchHHHHHHHHH
Q 023205          124 AVISCVGGFGS----------NSYMYKINGTA----NINAIRAA-SEKGVKRFVYISAADFGVANYLLQGYYEGKRAAET  188 (286)
Q Consensus       124 ~vi~~a~~~~~----------~~~~~~~~~~~----~~~l~~~a-~~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~  188 (286)
                      +||||+|....          ....+++|+.+    +.++++.+ ++.+.++||++||........+...|+.+|...+.
T Consensus        87 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~~~~~~~~~~y~~sk~a~~~  166 (262)
T PRK13394         87 ILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEASPLKSAYVTAKHGLLG  166 (262)
T ss_pred             EEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcchhhcCCCCCCcccHHHHHHHHH
Confidence            99999987531          12345688888    55566666 66678899999995333333445689999999987


Q ss_pred             HHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCc-hHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHH
Q 023205          189 ELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGS-PMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVR  261 (286)
Q Consensus       189 ~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~  261 (286)
                      +++.      ..+++++++|||.++++.....+.......+. ..+......       ..+....++++++|++++++.
T Consensus       167 ~~~~la~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~dva~a~~~  239 (262)
T PRK13394        167 LARVLAKEGAKHNVRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVM-------LGKTVDGVFTTVEDVAQTVLF  239 (262)
T ss_pred             HHHHHHHHhhhcCeEEEEEeeCcccchhhhhhhHhhhhccCCChHHHHHHHH-------hcCCCCCCCCCHHHHHHHHHH
Confidence            6653      35899999999999987542211000000000 001111110       012234679999999999999


Q ss_pred             HhcCCC--CCCCeeEeccccc
Q 023205          262 AATDPV--FPPGIVDVHGILR  280 (286)
Q Consensus       262 ~l~~~~--~~~~~~~l~~~~~  280 (286)
                      ++..+.  ..++.|++.+...
T Consensus       240 l~~~~~~~~~g~~~~~~~g~~  260 (262)
T PRK13394        240 LSSFPSAALTGQSFVVSHGWF  260 (262)
T ss_pred             HcCccccCCcCCEEeeCCcee
Confidence            997543  3478899987743

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.91  E-value=1.5e-22  Score=169.06  Aligned_cols=208  Identities=15%  Similarity=0.123  Sum_probs=152.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc------cccCCceeEEeccCCCHhHHHHHhc-------CC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD-------GV  122 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~------~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~  122 (286)
                      +++||||||+|++|++++++|+++|++|+++.|+..+...      .....+++++.+|+.|++++.++++       ++
T Consensus         6 ~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~i   85 (249)
T PRK12825          6 GRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERFGRI   85 (249)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHcCCC
Confidence            5689999999999999999999999999888887654211      1123568999999999998887764       57


Q ss_pred             CEEEEccccCCCc----------chhhhhhhHHHHHHHHHH----HHcCCCEEEEEecCCcCCCCccccchHHHHHHHHH
Q 023205          123 TAVISCVGGFGSN----------SYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKRAAET  188 (286)
Q Consensus       123 d~vi~~a~~~~~~----------~~~~~~~~~~~~~l~~~a----~~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~  188 (286)
                      |+|||++|.....          ...+++|+.+..++++.+    ++.+.++||++||............|+.+|...|.
T Consensus        86 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~~~~~~~~~~y~~sK~~~~~  165 (249)
T PRK12825         86 DILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGLPGWPGRSNYAAAKAGLVG  165 (249)
T ss_pred             CEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccCCCCCCchHHHHHHHHHHH
Confidence            9999999854321          234578888888888776    45678899999995332333445679999999887


Q ss_pred             HHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHH
Q 023205          189 ELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRA  262 (286)
Q Consensus       189 ~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~  262 (286)
                      ++..      ..+++++++|||.++++......          .......   ....+     ...+++.+|+++++..+
T Consensus       166 ~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~----------~~~~~~~---~~~~~-----~~~~~~~~dva~~~~~~  227 (249)
T PRK12825        166 LTKALARELAEYGITVNMVAPGDIDTDMKEATI----------EEAREAK---DAETP-----LGRSGTPEDIARAVAFL  227 (249)
T ss_pred             HHHHHHHHHhhcCeEEEEEEECCccCCcccccc----------chhHHhh---hccCC-----CCCCcCHHHHHHHHHHH
Confidence            6642      36899999999999998643211          0001110   00112     23389999999999999


Q ss_pred             hcCC--CCCCCeeEecccccc
Q 023205          263 ATDP--VFPPGIVDVHGILRY  281 (286)
Q Consensus       263 l~~~--~~~~~~~~l~~~~~~  281 (286)
                      +..+  ...|++|++++...+
T Consensus       228 ~~~~~~~~~g~~~~i~~g~~~  248 (249)
T PRK12825        228 CSDASDYITGQVIEVTGGVDV  248 (249)
T ss_pred             hCccccCcCCCEEEeCCCEee
Confidence            9765  346899999987654

>PRK06482 short chain dehydrogenase; Provisional

Probab=99.91  E-value=1.1e-22  Score=172.85  Aligned_cols=216  Identities=18%  Similarity=0.148  Sum_probs=150.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc--cccCCceeEEeccCCCHhHHHHHhc-------CCCEEE
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSWANNVIWHQGNLLSSDSWKEALD-------GVTAVI  126 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~--~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d~vi  126 (286)
                      .++||||||+|+||++++++|+++|++|+++.|+.+....  .....++.++++|++|.+++.++++       ++|+||
T Consensus         2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi   81 (276)
T PRK06482          2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDVVV   81 (276)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            4689999999999999999999999999999998643211  1223478999999999998887664       479999


Q ss_pred             EccccCCC----------cchhhhhhhHHHHHHHHHH----HHcCCCEEEEEecCCcCCCCccccchHHHHHHHHHHHHH
Q 023205          127 SCVGGFGS----------NSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLT  192 (286)
Q Consensus       127 ~~a~~~~~----------~~~~~~~~~~~~~~l~~~a----~~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~~  192 (286)
                      ||+|....          ....+++|+.++.++++++    ++.+.++||++||.......++...|+.+|+..|.++..
T Consensus        82 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~  161 (276)
T PRK06482         82 SNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQIAYPGFSLYHATKWGIEGFVEA  161 (276)
T ss_pred             ECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCcccccCCCCCchhHHHHHHHHHHHHH
Confidence            99986531          1245678999999999987    556678999999953222334567899999999987653


Q ss_pred             ------hCCCcEEEEeeCee---ecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHh
Q 023205          193 ------RYPYGGVILRPGFI---YGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAA  263 (286)
Q Consensus       193 ------~~g~~~~ilRp~~v---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l  263 (286)
                            ..|++++++|||.+   ||+........ ..+-......+.+.... +.+       .-+.+++|++++++.++
T Consensus       162 l~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~-------~~~~d~~~~~~a~~~~~  232 (276)
T PRK06482        162 VAQEVAPFGIEFTIVEPGPARTNFGAGLDRGAPL-DAYDDTPVGDLRRALAD-GSF-------AIPGDPQKMVQAMIASA  232 (276)
T ss_pred             HHHHhhccCcEEEEEeCCccccCCcccccccCCC-ccccchhhHHHHHHHhh-ccC-------CCCCCHHHHHHHHHHHH
Confidence                  36899999999988   44332111000 00001111122222111 111       11367899999999999


Q ss_pred             cCCCCCCCeeEecccccc
Q 023205          264 TDPVFPPGIVDVHGILRY  281 (286)
Q Consensus       264 ~~~~~~~~~~~l~~~~~~  281 (286)
                      ..+.. +..|++++.+..
T Consensus       233 ~~~~~-~~~~~~g~~~~~  249 (276)
T PRK06482        233 DQTPA-PRRLTLGSDAYA  249 (276)
T ss_pred             cCCCC-CeEEecChHHHH
Confidence            86644 567988877544

>PRK09135 pteridine reductase; Provisional

Probab=99.90  E-value=2.3e-22  Score=168.12  Aligned_cols=210  Identities=17%  Similarity=0.105  Sum_probs=148.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc-------cccCCceeEEeccCCCHhHHHHHhc-------C
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-------DSWANNVIWHQGNLLSSDSWKEALD-------G  121 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~-------~  121 (286)
                      .++|+||||+|+||++++++|+++|++|++++|+..+...       ......+.++.+|++|.+++..+++       +
T Consensus         6 ~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   85 (249)
T PRK09135          6 AKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAFGR   85 (249)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            4789999999999999999999999999999987533211       1112468899999999998888776       4


Q ss_pred             CCEEEEccccCCC----------cchhhhhhhHHHHHHHHHHHHc---CCCEEEEEecCCcCCCCccccchHHHHHHHHH
Q 023205          122 VTAVISCVGGFGS----------NSYMYKINGTANINAIRAASEK---GVKRFVYISAADFGVANYLLQGYYEGKRAAET  188 (286)
Q Consensus       122 ~d~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~~~---~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~  188 (286)
                      +|+|||++|....          ....+++|+.++.++++++...   ....++.+++.....+..+...|+.+|..+|.
T Consensus        86 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~  165 (249)
T PRK09135         86 LDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITDIHAERPLKGYPVYCAAKAALEM  165 (249)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEeChhhcCCCCCchhHHHHHHHHHH
Confidence            7999999986421          1345679999999999998642   12356766664323344566789999999999


Q ss_pred             HHHH---h--CCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHh
Q 023205          189 ELLT---R--YPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAA  263 (286)
Q Consensus       189 ~~~~---~--~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l  263 (286)
                      +++.   .  .+++++++|||.++|+.....+       ...   ..........+       ..+.+++|+|++++.++
T Consensus       166 ~~~~l~~~~~~~i~~~~v~pg~~~~~~~~~~~-------~~~---~~~~~~~~~~~-------~~~~~~~d~a~~~~~~~  228 (249)
T PRK09135        166 LTRSLALELAPEVRVNAVAPGAILWPEDGNSF-------DEE---ARQAILARTPL-------KRIGTPEDIAEAVRFLL  228 (249)
T ss_pred             HHHHHHHHHCCCCeEEEEEeccccCccccccC-------CHH---HHHHHHhcCCc-------CCCcCHHHHHHHHHHHc
Confidence            8764   1  3699999999999998753211       111   11111111111       11235899999997766


Q ss_pred             cCC-CCCCCeeEeccccccc
Q 023205          264 TDP-VFPPGIVDVHGILRYS  282 (286)
Q Consensus       264 ~~~-~~~~~~~~l~~~~~~s  282 (286)
                      ... ...|++|++.+++.++
T Consensus       229 ~~~~~~~g~~~~i~~g~~~~  248 (249)
T PRK09135        229 ADASFITGQILAVDGGRSLT  248 (249)
T ss_pred             CccccccCcEEEECCCeecc
Confidence            543 3468899999988654

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=99.90  E-value=1.6e-23  Score=173.70  Aligned_cols=206  Identities=24%  Similarity=0.187  Sum_probs=145.7

Q ss_pred             EEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCccc-ccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccccCCCcch
Q 023205           59 LLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSL-RDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFGSNSY  137 (286)
Q Consensus        59 VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~-~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~~~~~~~  137 (286)
                      |+|+||||.+|+++++.|++.+++|++++|+.++.. ......+++++++|+.|++++.++|+|+|+||++.+...    
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~~~g~~vv~~d~~~~~~l~~al~g~d~v~~~~~~~~----   76 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQALGAEVVEADYDDPESLVAALKGVDAVFSVTPPSH----   76 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHHHTTTEEEES-TT-HHHHHHHHTTCSEEEEESSCSC----
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhhhcccceEeecccCCHHHHHHHHcCCceEEeecCcch----
Confidence            799999999999999999999999999999985432 222346889999999999999999999999999987654    


Q ss_pred             hhhhhhHHHHHHHHHHHHcCCCEEEEEecCCcCC---CCccccchHHHHHHHHHHHHHhCCCcEEEEeeCeeecCCCCCc
Q 023205          138 MYKINGTANINAIRAASEKGVKRFVYISAADFGV---ANYLLQGYYEGKRAAETELLTRYPYGGVILRPGFIYGTRTVGG  214 (286)
Q Consensus       138 ~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~~~~~---~~~~~~~y~~sK~~~E~~~~~~~g~~~~ilRp~~v~g~~~~~~  214 (286)
                        ........+++++|+++|+|+||+.|......   ...|...+...|...|+.+++ .+++++++|||.++.......
T Consensus        77 --~~~~~~~~~li~Aa~~agVk~~v~ss~~~~~~~~~~~~p~~~~~~~k~~ie~~l~~-~~i~~t~i~~g~f~e~~~~~~  153 (233)
T PF05368_consen   77 --PSELEQQKNLIDAAKAAGVKHFVPSSFGADYDESSGSEPEIPHFDQKAEIEEYLRE-SGIPYTIIRPGFFMENLLPPF  153 (233)
T ss_dssp             --CCHHHHHHHHHHHHHHHT-SEEEESEESSGTTTTTTSTTHHHHHHHHHHHHHHHHH-CTSEBEEEEE-EEHHHHHTTT
T ss_pred             --hhhhhhhhhHHHhhhccccceEEEEEecccccccccccccchhhhhhhhhhhhhhh-ccccceeccccchhhhhhhhh
Confidence              22334567889999999999999766532221   123345677889999998877 599999999999875422100


Q ss_pred             cccCccccCchHHHHHHhcccCC--CCCCCCCccCCC-ccHHHHHHHHHHHhcCCCCC--CCeeEeccccccccc
Q 023205          215 MKLPLGVIGSPMEMVLQHAKPLS--QLPLVGPLFTPP-VNVTVVAKVAVRAATDPVFP--PGIVDVHGILRYSQK  284 (286)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~g~~~~~~-i~v~Dva~~~~~~l~~~~~~--~~~~~l~~~~~~s~~  284 (286)
                                  ...........  .++..++....+ ++.+|+|+++..++.++...  ++.+.+.+ +.+|++
T Consensus       154 ------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvg~~va~il~~p~~~~~~~~~~~~~-~~~t~~  215 (233)
T PF05368_consen  154 ------------APVVDIKKSKDVVTLPGPGNQKAVPVTDTRDVGRAVAAILLDPEKHNNGKTIFLAG-ETLTYN  215 (233)
T ss_dssp             ------------HHTTCSCCTSSEEEEETTSTSEEEEEEHHHHHHHHHHHHHHSGGGTTEEEEEEEGG-GEEEHH
T ss_pred             ------------cccccccccceEEEEccCCCccccccccHHHHHHHHHHHHcChHHhcCCEEEEeCC-CCCCHH
Confidence                        00000111111  222334434555 49999999999999987754  57777766 656654

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>PRK06180 short chain dehydrogenase; Provisional

Probab=99.90  E-value=3e-22  Score=170.25  Aligned_cols=220  Identities=13%  Similarity=0.044  Sum_probs=148.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc--cccCCceeEEeccCCCHhHHHHHhc-------CCCEEE
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSWANNVIWHQGNLLSSDSWKEALD-------GVTAVI  126 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~--~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d~vi  126 (286)
                      +++|+||||+|+||++++++|+++|++|++++|+.++...  .....++.++.+|++|.+++.++++       .+|+||
T Consensus         4 ~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~vv   83 (277)
T PRK06180          4 MKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEATFGPIDVLV   83 (277)
T ss_pred             CCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCCEEE
Confidence            5689999999999999999999999999999998654211  1123468889999999998887765       479999


Q ss_pred             EccccCCC----------cchhhhhhhHHHHHHHHHHH----HcCCCEEEEEecCCcCCCCccccchHHHHHHHHHHHHH
Q 023205          127 SCVGGFGS----------NSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLT  192 (286)
Q Consensus       127 ~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~----~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~~  192 (286)
                      ||||....          ....+++|+.++.++++++.    +.+.++||++||........+...|+.+|...|.++..
T Consensus        84 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~~~~~~~~Y~~sK~a~~~~~~~  163 (277)
T PRK06180         84 NNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLITMPGIGYYCGSKFALEGISES  163 (277)
T ss_pred             ECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccCCCCCcchhHHHHHHHHHHHHH
Confidence            99987531          12447899999999988853    44567999999953222334567899999999886643


Q ss_pred             ------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcCC
Q 023205          193 ------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDP  266 (286)
Q Consensus       193 ------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~  266 (286)
                            ..|++++++|||.+.++.....+.............+.......  ..   .....+.+++|+|++++.+++.+
T Consensus       164 la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~---~~~~~~~~~~dva~~~~~~l~~~  238 (277)
T PRK06180        164 LAKEVAPFGIHVTAVEPGSFRTDWAGRSMVRTPRSIADYDALFGPIRQAR--EA---KSGKQPGDPAKAAQAILAAVESD  238 (277)
T ss_pred             HHHHhhhhCcEEEEEecCCcccCccccccccCCCCcHhHHHHHHHHHHHH--Hh---hccCCCCCHHHHHHHHHHHHcCC
Confidence                  35899999999999876432221110001111111110000000  00   01123568999999999999877


Q ss_pred             CCCCCeeEeccccccc
Q 023205          267 VFPPGIVDVHGILRYS  282 (286)
Q Consensus       267 ~~~~~~~~l~~~~~~s  282 (286)
                      ...  ...+.+++..+
T Consensus       239 ~~~--~~~~~g~~~~~  252 (277)
T PRK06180        239 EPP--LHLLLGSDALR  252 (277)
T ss_pred             CCC--eeEeccHHHHH
Confidence            642  33455544443

>PRK07806 short chain dehydrogenase; Provisional

Probab=99.90  E-value=1e-22  Score=170.30  Aligned_cols=211  Identities=20%  Similarity=0.165  Sum_probs=151.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc------cccCCceeEEeccCCCHhHHHHHhc-------CC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD-------GV  122 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~------~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~  122 (286)
                      .++++||||+|+||.+++++|+++|++|++++|+.++...      .....++.++.+|++|++++.++++       ++
T Consensus         6 ~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   85 (248)
T PRK07806          6 GKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEFGGL   85 (248)
T ss_pred             CcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence            4789999999999999999999999999999997543211      1112467889999999998877765       58


Q ss_pred             CEEEEccccCC----CcchhhhhhhHHHHHHHHHHHHcC--CCEEEEEecCCcC---C-C-CccccchHHHHHHHHHHHH
Q 023205          123 TAVISCVGGFG----SNSYMYKINGTANINAIRAASEKG--VKRFVYISAADFG---V-A-NYLLQGYYEGKRAAETELL  191 (286)
Q Consensus       123 d~vi~~a~~~~----~~~~~~~~~~~~~~~l~~~a~~~~--v~~~v~~Ss~~~~---~-~-~~~~~~y~~sK~~~E~~~~  191 (286)
                      |+|||+++...    ++...+++|+.++.++++++.+..  ..++|++||....   . . ......|+.+|..+|.+++
T Consensus        86 d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~~~~Y~~sK~a~e~~~~  165 (248)
T PRK07806         86 DALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQAHFIPTVKTMPEYEPVARSKRAGEDALR  165 (248)
T ss_pred             cEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCchhhcCccccCCccccHHHHHHHHHHHHHH
Confidence            99999997642    234567899999999999998642  2489999984211   1 1 1224679999999999776


Q ss_pred             H------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcC
Q 023205          192 T------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATD  265 (286)
Q Consensus       192 ~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~  265 (286)
                      .      ..++++++++|+.+-++........   .  . ......     ...|     ...+++++|+|++++.+++.
T Consensus       166 ~l~~~~~~~~i~v~~v~pg~~~~~~~~~~~~~---~--~-~~~~~~-----~~~~-----~~~~~~~~dva~~~~~l~~~  229 (248)
T PRK07806        166 ALRPELAEKGIGFVVVSGDMIEGTVTATLLNR---L--N-PGAIEA-----RREA-----AGKLYTVSEFAAEVARAVTA  229 (248)
T ss_pred             HHHHHhhccCeEEEEeCCccccCchhhhhhcc---C--C-HHHHHH-----HHhh-----hcccCCHHHHHHHHHHHhhc
Confidence            4      3689999999987765532110000   0  0 000000     0011     23689999999999999997


Q ss_pred             CCCCCCeeEeccccccc
Q 023205          266 PVFPPGIVDVHGILRYS  282 (286)
Q Consensus       266 ~~~~~~~~~l~~~~~~s  282 (286)
                      +...+++|+++|++.+.
T Consensus       230 ~~~~g~~~~i~~~~~~~  246 (248)
T PRK07806        230 PVPSGHIEYVGGADYFL  246 (248)
T ss_pred             cccCccEEEecCcccee
Confidence            77779999999998653

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=99.90  E-value=1.1e-22  Score=164.67  Aligned_cols=205  Identities=17%  Similarity=0.162  Sum_probs=138.2

Q ss_pred             EEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhc-CCCEEEEccccCCC---
Q 023205           59 LLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD-GVTAVISCVGGFGS---  134 (286)
Q Consensus        59 VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~-~~d~vi~~a~~~~~---  134 (286)
                      |+||||||+||++|+.+|.+.||+|++++|++.+..... ...++       ..+.+.+... +||+|||+||..-.   
T Consensus         1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~-~~~v~-------~~~~~~~~~~~~~DavINLAG~~I~~rr   72 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNL-HPNVT-------LWEGLADALTLGIDAVINLAGEPIAERR   72 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhc-Ccccc-------ccchhhhcccCCCCEEEECCCCcccccc
Confidence            689999999999999999999999999999987643221 11221       2233444444 79999999996521   


Q ss_pred             -----cchhhhhhhHHHHHHHHHHHHc--CCCEEEEEecCC-cCCCCc---------cccchHHHHHHHHHHHH--HhCC
Q 023205          135 -----NSYMYKINGTANINAIRAASEK--GVKRFVYISAAD-FGVANY---------LLQGYYEGKRAAETELL--TRYP  195 (286)
Q Consensus       135 -----~~~~~~~~~~~~~~l~~~a~~~--~v~~~v~~Ss~~-~~~~~~---------~~~~y~~sK~~~E~~~~--~~~g  195 (286)
                           .....+-.+..|..++++..+.  +++.+|.-|... ||....         .....++.-..-|+...  +..|
T Consensus        73 Wt~~~K~~i~~SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~~~~~~~tE~~~~g~~Fla~lc~~WE~~a~~a~~~g  152 (297)
T COG1090          73 WTEKQKEEIRQSRINTTEKLVELIAASETKPKVLISASAVGYYGHSGDRVVTEESPPGDDFLAQLCQDWEEEALQAQQLG  152 (297)
T ss_pred             CCHHHHHHHHHHHhHHHHHHHHHHHhccCCCcEEEecceEEEecCCCceeeecCCCCCCChHHHHHHHHHHHHhhhhhcC
Confidence                 1244566677888888888754  444444444432 443321         12334444444454443  3579


Q ss_pred             CcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhc-ccCCCCCCCCCccCCCccHHHHHHHHHHHhcCCCCCCCeeE
Q 023205          196 YGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHA-KPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDPVFPPGIVD  274 (286)
Q Consensus       196 ~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~  274 (286)
                      .+++++|.|.|.++..            .++..+.... ...+.--..|.++++|||++|+.++|..+++++.. .+.||
T Consensus       153 tRvvllRtGvVLs~~G------------GaL~~m~~~fk~glGG~~GsGrQ~~SWIhieD~v~~I~fll~~~~l-sGp~N  219 (297)
T COG1090         153 TRVVLLRTGVVLSPDG------------GALGKMLPLFKLGLGGKLGSGRQWFSWIHIEDLVNAILFLLENEQL-SGPFN  219 (297)
T ss_pred             ceEEEEEEEEEecCCC------------cchhhhcchhhhccCCccCCCCceeeeeeHHHHHHHHHHHHhCcCC-CCccc
Confidence            9999999999999764            2223332222 22222223466799999999999999999999776 77999


Q ss_pred             eccccccccc
Q 023205          275 VHGILRYSQK  284 (286)
Q Consensus       275 l~~~~~~s~~  284 (286)
                      ++.|.+++.+
T Consensus       220 ~taP~PV~~~  229 (297)
T COG1090         220 LTAPNPVRNK  229 (297)
T ss_pred             ccCCCcCcHH
Confidence            9999998764

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=99.90  E-value=3.9e-22  Score=167.30  Aligned_cols=218  Identities=19%  Similarity=0.173  Sum_probs=147.6

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc-----cccCCceeEEeccCCCHhHHHHHh-------cCCCE
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEAL-------DGVTA  124 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~-----~~~~~~~~~i~~Dl~d~~~~~~~~-------~~~d~  124 (286)
                      ++||||||+|++|++++++|+++|++|++++|+.+....     .....++.++.+|+.|.+++..++       .++|+
T Consensus         2 ~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   81 (255)
T TIGR01963         2 KTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGLDI   81 (255)
T ss_pred             CEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            589999999999999999999999999999998643211     011246889999999998665544       45799


Q ss_pred             EEEccccCCC------c----chhhhhhhHHHHHHHHHH----HHcCCCEEEEEecCCcCCCCccccchHHHHHHHHHHH
Q 023205          125 VISCVGGFGS------N----SYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETEL  190 (286)
Q Consensus       125 vi~~a~~~~~------~----~~~~~~~~~~~~~l~~~a----~~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~  190 (286)
                      |||+++....      +    ...++.|+.++..+++.+    ++.+.++||++||.......+....|+.+|...|.++
T Consensus        82 vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~~~~~~y~~sk~a~~~~~  161 (255)
T TIGR01963        82 LVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHGLVASPFKSAYVAAKHGLIGLT  161 (255)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcCCCCCCchhHHHHHHHHHHH
Confidence            9999986431      1    234567888877777766    5567789999998532222334567999999988766


Q ss_pred             HH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhc
Q 023205          191 LT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAAT  264 (286)
Q Consensus       191 ~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~  264 (286)
                      ..      ..+++++++||+.++++.............+..........     + ..+....++++++|+|++++.++.
T Consensus       162 ~~~~~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~~~~d~a~~~~~~~~  235 (255)
T TIGR01963       162 KVLALEVAAHGITVNAICPGYVRTPLVEKQIADQAKTRGIPEEQVIREV-----M-LPGQPTKRFVTVDEVAETALFLAS  235 (255)
T ss_pred             HHHHHHhhhcCeEEEEEecCccccHHHHHHHHhhhcccCCCchHHHHHH-----H-HccCccccCcCHHHHHHHHHHHcC
Confidence            53      35899999999999987421110000000000000000000     0 012234578999999999999997


Q ss_pred             CC--CCCCCeeEeccccc
Q 023205          265 DP--VFPPGIVDVHGILR  280 (286)
Q Consensus       265 ~~--~~~~~~~~l~~~~~  280 (286)
                      .+  ...++.|++.++..
T Consensus       236 ~~~~~~~g~~~~~~~g~~  253 (255)
T TIGR01963       236 DAAAGITGQAIVLDGGWT  253 (255)
T ss_pred             ccccCccceEEEEcCccc
Confidence            64  33578999987654

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=99.90  E-value=4.6e-22  Score=166.48  Aligned_cols=209  Identities=16%  Similarity=0.074  Sum_probs=151.3

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc-----cccCCceeEEeccCCCHhHHHHHhc-------CC
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------GV  122 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~-----~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~  122 (286)
                      +.++|+||||+|++|.+++++|+++|++|++++|+.++...     .....++.++.+|+.|++++.++++       .+
T Consensus         5 ~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~   84 (251)
T PRK12826          5 EGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGRL   84 (251)
T ss_pred             CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            45789999999999999999999999999999998543211     1112458899999999998888875       58


Q ss_pred             CEEEEccccCCC----------cchhhhhhhHHHHHHHHHHH----HcCCCEEEEEecCCcC-CCCccccchHHHHHHHH
Q 023205          123 TAVISCVGGFGS----------NSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFG-VANYLLQGYYEGKRAAE  187 (286)
Q Consensus       123 d~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~----~~~v~~~v~~Ss~~~~-~~~~~~~~y~~sK~~~E  187 (286)
                      |+|||+++....          ....++.|+.++.++++++.    +.+.++||++||.... ........|+.+|...|
T Consensus        85 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~~~~~~~~~~y~~sK~a~~  164 (251)
T PRK12826         85 DILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGPRVGYPGLAHYAASKAGLV  164 (251)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHhhccCCCCccHHHHHHHHHH
Confidence            999999987542          12356788889888888773    4567799999995322 33445567999999998


Q ss_pred             HHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHH
Q 023205          188 TELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVR  261 (286)
Q Consensus       188 ~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~  261 (286)
                      .++..      ..+++++++|||.++|+......        .  ..+......  ..|.     ..+++++|+|++++.
T Consensus       165 ~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~--------~--~~~~~~~~~--~~~~-----~~~~~~~dva~~~~~  227 (251)
T PRK12826        165 GFTRALALELAARNITVNSVHPGGVDTPMAGNLG--------D--AQWAEAIAA--AIPL-----GRLGEPEDIAAAVLF  227 (251)
T ss_pred             HHHHHHHHHHHHcCeEEEEEeeCCCCcchhhhcC--------c--hHHHHHHHh--cCCC-----CCCcCHHHHHHHHHH
Confidence            87753      35899999999999988642210        0  000111110  1121     247899999999999


Q ss_pred             HhcCCC--CCCCeeEeccccc
Q 023205          262 AATDPV--FPPGIVDVHGILR  280 (286)
Q Consensus       262 ~l~~~~--~~~~~~~l~~~~~  280 (286)
                      ++..+.  ..|++|++.++..
T Consensus       228 l~~~~~~~~~g~~~~~~~g~~  248 (251)
T PRK12826        228 LASDEARYITGQTLPVDGGAT  248 (251)
T ss_pred             HhCccccCcCCcEEEECCCcc
Confidence            887643  3589999987543

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.90  E-value=6.9e-22  Score=166.13  Aligned_cols=217  Identities=14%  Similarity=0.039  Sum_probs=148.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc-----cccCCceeEEeccCCCHhHHHHHhc-------CCC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------GVT  123 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~-----~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d  123 (286)
                      +++|+|||++|++|++++++|+++|++|++++|++++...     .....+++++.+|+.|++++.++++       ++|
T Consensus         4 ~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d   83 (258)
T PRK12429          4 GKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGGVD   83 (258)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            4689999999999999999999999999999998654211     1123578899999999998887765       589


Q ss_pred             EEEEccccCCCc----------chhhhhhhHHHHHH----HHHHHHcCCCEEEEEecCCcCCCCccccchHHHHHHHHHH
Q 023205          124 AVISCVGGFGSN----------SYMYKINGTANINA----IRAASEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETE  189 (286)
Q Consensus       124 ~vi~~a~~~~~~----------~~~~~~~~~~~~~l----~~~a~~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~  189 (286)
                      +|||+++.....          ...++.|+.++.++    +..+++.+.++||++||............|+.+|...+.+
T Consensus        84 ~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~~k~a~~~~  163 (258)
T PRK12429         84 ILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHGLVGSAGKAAYVSAKHGLIGL  163 (258)
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEEEcchhhccCCCCcchhHHHHHHHHHH
Confidence            999999864321          13456788885544    4445556788999999953333344567899999988876


Q ss_pred             HHH------hCCCcEEEEeeCeeecCCCCCccccCccccCc-hHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHH
Q 023205          190 LLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGS-PMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRA  262 (286)
Q Consensus       190 ~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~  262 (286)
                      .+.      ..+++++++|||.+.++.............+. .........       ........+++++|+|++++.+
T Consensus       164 ~~~l~~~~~~~~i~v~~~~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~d~a~~~~~l  236 (258)
T PRK12429        164 TKVVALEGATHGVTVNAICPGYVDTPLVRKQIPDLAKERGISEEEVLEDVL-------LPLVPQKRFTTVEEIADYALFL  236 (258)
T ss_pred             HHHHHHHhcccCeEEEEEecCCCcchhhhhhhhhhccccCCChHHHHHHHH-------hccCCccccCCHHHHHHHHHHH
Confidence            642      36899999999999987642211000000000 000000000       0011235689999999999999


Q ss_pred             hcCCC--CCCCeeEecccc
Q 023205          263 ATDPV--FPPGIVDVHGIL  279 (286)
Q Consensus       263 l~~~~--~~~~~~~l~~~~  279 (286)
                      +....  ..++.|++.++.
T Consensus       237 ~~~~~~~~~g~~~~~~~g~  255 (258)
T PRK12429        237 ASFAAKGVTGQAWVVDGGW  255 (258)
T ss_pred             cCccccCccCCeEEeCCCE
Confidence            87643  347899998763

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.89  E-value=1.2e-21  Score=163.40  Aligned_cols=207  Identities=17%  Similarity=0.131  Sum_probs=150.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc-----cccCCceeEEeccCCCHhHHHHHhcC-------CC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALDG-------VT  123 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~-----~~~~~~~~~i~~Dl~d~~~~~~~~~~-------~d  123 (286)
                      +++|+||||+|++|.+++++|+++|++|+++.|++.+...     .....++.++.+|+.|++++.+++++       +|
T Consensus         5 ~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   84 (246)
T PRK05653          5 GKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFGALD   84 (246)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence            4689999999999999999999999999999998654211     11234688999999999988777654       59


Q ss_pred             EEEEccccCCCc----------chhhhhhhHHHHHHHHHHH----HcCCCEEEEEecCCcCCCCccccchHHHHHHHHHH
Q 023205          124 AVISCVGGFGSN----------SYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEGKRAAETE  189 (286)
Q Consensus       124 ~vi~~a~~~~~~----------~~~~~~~~~~~~~l~~~a~----~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~  189 (286)
                      +|||++|.....          ...++.|+.+..++++.+.    +.+.++||++||........+...|..+|...|.+
T Consensus        85 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~~~~~~~~~y~~sk~~~~~~  164 (246)
T PRK05653         85 ILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGVTGNPGQTNYSAAKAGVIGF  164 (246)
T ss_pred             EEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhccCCCCCcHhHhHHHHHHHH
Confidence            999999875321          2346788888888887774    56678999999953323334566799999988876


Q ss_pred             HHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHh
Q 023205          190 LLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAA  263 (286)
Q Consensus       190 ~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l  263 (286)
                      ++.      ..+++++++|||.++++....           ..........  ..++     ...+++++|+++++..++
T Consensus       165 ~~~l~~~~~~~~i~~~~i~pg~~~~~~~~~-----------~~~~~~~~~~--~~~~-----~~~~~~~~dva~~~~~~~  226 (246)
T PRK05653        165 TKALALELASRGITVNAVAPGFIDTDMTEG-----------LPEEVKAEIL--KEIP-----LGRLGQPEEVANAVAFLA  226 (246)
T ss_pred             HHHHHHHHhhcCeEEEEEEeCCcCCcchhh-----------hhHHHHHHHH--hcCC-----CCCCcCHHHHHHHHHHHc
Confidence            543      358999999999998875421           0111111111  0111     245789999999999999


Q ss_pred             cCC--CCCCCeeEeccccc
Q 023205          264 TDP--VFPPGIVDVHGILR  280 (286)
Q Consensus       264 ~~~--~~~~~~~~l~~~~~  280 (286)
                      ...  ...+++|++.|+..
T Consensus       227 ~~~~~~~~g~~~~~~gg~~  245 (246)
T PRK05653        227 SDAASYITGQVIPVNGGMY  245 (246)
T ss_pred             CchhcCccCCEEEeCCCee
Confidence            753  34578999998764

>PRK12828 short chain dehydrogenase; Provisional

Probab=99.89  E-value=1.2e-21  Score=162.72  Aligned_cols=200  Identities=21%  Similarity=0.182  Sum_probs=148.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCccc---ccccCCceeEEeccCCCHhHHHHHhc-------CCCEE
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSL---RDSWANNVIWHQGNLLSSDSWKEALD-------GVTAV  125 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~---~~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d~v  125 (286)
                      .++||||||+|+||+++++.|+++|++|++++|+..+..   ......+++++.+|+.|.+++.++++       ++|+|
T Consensus         7 ~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v   86 (239)
T PRK12828          7 GKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQFGRLDAL   86 (239)
T ss_pred             CCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHhCCcCEE
Confidence            579999999999999999999999999999999865421   11223467888999999988877765       58999


Q ss_pred             EEccccCCC----------cchhhhhhhHHHHHHHHHHH----HcCCCEEEEEecCCcCCCCccccchHHHHHHHHHHHH
Q 023205          126 ISCVGGFGS----------NSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELL  191 (286)
Q Consensus       126 i~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~----~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~  191 (286)
                      ||+++....          ....+++|..++.++++++.    +.+.++||++||............|+.+|...+.++.
T Consensus        87 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~sk~a~~~~~~  166 (239)
T PRK12828         87 VNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAALKAGPGMGAYAAAKAGVARLTE  166 (239)
T ss_pred             EECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhccCCCCcchhHHHHHHHHHHHH
Confidence            999986421          12345688888888877764    4567899999995432233445679999998887664


Q ss_pred             H------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcC
Q 023205          192 T------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATD  265 (286)
Q Consensus       192 ~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~  265 (286)
                      .      ..+++++++|||.++++.....                        .+  ......+++++|+|++++.++.+
T Consensus       167 ~~a~~~~~~~i~~~~i~pg~v~~~~~~~~------------------------~~--~~~~~~~~~~~dva~~~~~~l~~  220 (239)
T PRK12828        167 ALAAELLDRGITVNAVLPSIIDTPPNRAD------------------------MP--DADFSRWVTPEQIAAVIAFLLSD  220 (239)
T ss_pred             HHHHHhhhcCeEEEEEecCcccCcchhhc------------------------CC--chhhhcCCCHHHHHHHHHHHhCc
Confidence            3      3589999999999987632111                        00  01123479999999999999986


Q ss_pred             CC--CCCCeeEecccccc
Q 023205          266 PV--FPPGIVDVHGILRY  281 (286)
Q Consensus       266 ~~--~~~~~~~l~~~~~~  281 (286)
                      +.  ..++.+++.|++.+
T Consensus       221 ~~~~~~g~~~~~~g~~~~  238 (239)
T PRK12828        221 EAQAITGASIPVDGGVAL  238 (239)
T ss_pred             ccccccceEEEecCCEeC
Confidence            53  45889999988644

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.89  E-value=1.4e-21  Score=185.05  Aligned_cols=192  Identities=16%  Similarity=0.175  Sum_probs=139.0

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhc--CCCEEEEccccC
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD--GVTAVISCVGGF  132 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~--~~d~vi~~a~~~  132 (286)
                      +.|+||||||+||||++|++.|.++|++|..                   ..+|++|.+.+...++  ++|+|||||+..
T Consensus       379 ~~mkiLVtGa~G~iG~~l~~~L~~~g~~v~~-------------------~~~~l~d~~~v~~~i~~~~pd~Vih~Aa~~  439 (668)
T PLN02260        379 PSLKFLIYGRTGWIGGLLGKLCEKQGIAYEY-------------------GKGRLEDRSSLLADIRNVKPTHVFNAAGVT  439 (668)
T ss_pred             CCceEEEECCCchHHHHHHHHHHhCCCeEEe-------------------eccccccHHHHHHHHHhhCCCEEEECCccc
Confidence            4578999999999999999999999988731                   1246778888888876  689999999875


Q ss_pred             C---------CcchhhhhhhHHHHHHHHHHHHcCCCEEEEEec-CCcCC----------C--C-----ccccchHHHHHH
Q 023205          133 G---------SNSYMYKINGTANINAIRAASEKGVKRFVYISA-ADFGV----------A--N-----YLLQGYYEGKRA  185 (286)
Q Consensus       133 ~---------~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss-~~~~~----------~--~-----~~~~~y~~sK~~  185 (286)
                      .         ++...+++|+.++.+++++|++.++++ |++|| .+|+.          +  +     .+.+.|+.+|..
T Consensus       440 ~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~g~~~-v~~Ss~~v~~~~~~~~~~~~~p~~E~~~~~~~~~~Yg~sK~~  518 (668)
T PLN02260        440 GRPNVDWCESHKVETIRANVVGTLTLADVCRENGLLM-MNFATGCIFEYDAKHPEGSGIGFKEEDKPNFTGSFYSKTKAM  518 (668)
T ss_pred             CCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHcCCeE-EEEcccceecCCcccccccCCCCCcCCCCCCCCChhhHHHHH
Confidence            3         223567899999999999999999965 45554 43321          0  1     123789999999


Q ss_pred             HHHHHHHhCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcC
Q 023205          186 AETELLTRYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATD  265 (286)
Q Consensus       186 ~E~~~~~~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~  265 (286)
                      +|+++...  -++.++|+.++|+....+.        .+++..+.+...   .+.+.    .+...++|++.+++.+++.
T Consensus       519 ~E~~~~~~--~~~~~~r~~~~~~~~~~~~--------~nfv~~~~~~~~---~~~vp----~~~~~~~~~~~~~~~l~~~  581 (668)
T PLN02260        519 VEELLREY--DNVCTLRVRMPISSDLSNP--------RNFITKISRYNK---VVNIP----NSMTVLDELLPISIEMAKR  581 (668)
T ss_pred             HHHHHHhh--hhheEEEEEEecccCCCCc--------cHHHHHHhccce---eeccC----CCceehhhHHHHHHHHHHh
Confidence            99988763  3678889999997542211        234444443322   22221    2457788899888888875


Q ss_pred             CCCCCCeeEecccccccccC
Q 023205          266 PVFPPGIVDVHGILRYSQKS  285 (286)
Q Consensus       266 ~~~~~~~~~l~~~~~~s~~~  285 (286)
                      +.  +++||++++..+||..
T Consensus       582 ~~--~giyni~~~~~~s~~e  599 (668)
T PLN02260        582 NL--RGIWNFTNPGVVSHNE  599 (668)
T ss_pred             CC--CceEEecCCCcCcHHH
Confidence            33  6899999999999863

>PRK08263 short chain dehydrogenase; Provisional

Probab=99.89  E-value=1.1e-21  Score=166.61  Aligned_cols=219  Identities=13%  Similarity=0.056  Sum_probs=151.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc--cccCCceeEEeccCCCHhHHHHHhc-------CCCEEE
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSWANNVIWHQGNLLSSDSWKEALD-------GVTAVI  126 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~--~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d~vi  126 (286)
                      +++|+||||+|+||++++++|+++|++|++++|+.++...  ......+.++++|++|++++.++++       ++|+||
T Consensus         3 ~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi   82 (275)
T PRK08263          3 EKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLDIVV   82 (275)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            4689999999999999999999999999999998654211  1123468889999999988877654       579999


Q ss_pred             EccccCCC----------cchhhhhhhHHHHHHHHHH----HHcCCCEEEEEecCCcCCCCccccchHHHHHHHHHHHHH
Q 023205          127 SCVGGFGS----------NSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLT  192 (286)
Q Consensus       127 ~~a~~~~~----------~~~~~~~~~~~~~~l~~~a----~~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~~  192 (286)
                      ||+|....          ....+++|+.++.++++.+    ++.+.+++|++||............|+.+|...+.+...
T Consensus        83 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sKaa~~~~~~~  162 (275)
T PRK08263         83 NNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGGISAFPMSGIYHASKWALEGMSEA  162 (275)
T ss_pred             ECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcCCCCCccHHHHHHHHHHHHHHH
Confidence            99986532          1345789999988777765    556678999999953322333456799999998876642


Q ss_pred             ------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCC-ccHHHHHHHHHHHhcC
Q 023205          193 ------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPP-VNVTVVAKVAVRAATD  265 (286)
Q Consensus       193 ------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-i~v~Dva~~~~~~l~~  265 (286)
                            ..|++++++|||.+..+.......... .... .+.+......  .     .....+ ++++|+|++++.+++.
T Consensus       163 la~e~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~-~~~~-~~~~~~~~~~--~-----~~~~~~~~~p~dva~~~~~l~~~  233 (275)
T PRK08263        163 LAQEVAEFGIKVTLVEPGGYSTDWAGTSAKRAT-PLDA-YDTLREELAE--Q-----WSERSVDGDPEAAAEALLKLVDA  233 (275)
T ss_pred             HHHHhhhhCcEEEEEecCCccCCccccccccCC-Cchh-hhhHHHHHHH--H-----HHhccCCCCHHHHHHHHHHHHcC
Confidence                  368999999999987654321110000 0000 0111010000  0     011234 7899999999999998


Q ss_pred             CCCCCCeeEecccccccc
Q 023205          266 PVFPPGIVDVHGILRYSQ  283 (286)
Q Consensus       266 ~~~~~~~~~l~~~~~~s~  283 (286)
                      +...++.|+..+++.+++
T Consensus       234 ~~~~~~~~~~~~~~~~~~  251 (275)
T PRK08263        234 ENPPLRLFLGSGVLDLAK  251 (275)
T ss_pred             CCCCeEEEeCchHHHHHH
Confidence            877677777777776654

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=99.89  E-value=9e-22  Score=165.52  Aligned_cols=220  Identities=12%  Similarity=0.029  Sum_probs=153.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc--cccCCceeEEeccCCCHhHHHHHhc-------CCCEEE
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSWANNVIWHQGNLLSSDSWKEALD-------GVTAVI  126 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~--~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d~vi  126 (286)
                      .++++||||+|+||.++++.|+++|++|++++|+......  .....++.++.+|++|.++++.+++       .+|++|
T Consensus         6 ~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li   85 (257)
T PRK07067          6 GKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGIDILF   85 (257)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            5689999999999999999999999999999998754211  1123468899999999998887765       579999


Q ss_pred             EccccCCC----------cchhhhhhhHHHHHHHHHHHHcC-----CCEEEEEecCCcCCCCccccchHHHHHHHHHHHH
Q 023205          127 SCVGGFGS----------NSYMYKINGTANINAIRAASEKG-----VKRFVYISAADFGVANYLLQGYYEGKRAAETELL  191 (286)
Q Consensus       127 ~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~~~~-----v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~  191 (286)
                      |+++....          ....+++|+.++.++++++....     -.+||++||........+...|+.+|...+.+.+
T Consensus        86 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~  165 (257)
T PRK07067         86 NNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRRGEALVSHYCATKAAVISYTQ  165 (257)
T ss_pred             ECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCCCCCCCchhhhhHHHHHHHHH
Confidence            99986421          22456899999999998886431     2479999995332333456789999999888764


Q ss_pred             H------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcC
Q 023205          192 T------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATD  265 (286)
Q Consensus       192 ~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~  265 (286)
                      .      ..|+++++++||.++++........................  ...     .....+++++|+|++++.++..
T Consensus       166 ~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-----~~~~~~~~~~dva~~~~~l~s~  238 (257)
T PRK07067        166 SAALALIRHGINVNAIAPGVVDTPMWDQVDALFARYENRPPGEKKRLV--GEA-----VPLGRMGVPDDLTGMALFLASA  238 (257)
T ss_pred             HHHHHhcccCeEEEEEeeCcccchhhhhhhhhhhhccCCCHHHHHHHH--hhc-----CCCCCccCHHHHHHHHHHHhCc
Confidence            2      46899999999999886432110000000000000000000  011     1235688999999999999976


Q ss_pred             CC--CCCCeeEeccccccc
Q 023205          266 PV--FPPGIVDVHGILRYS  282 (286)
Q Consensus       266 ~~--~~~~~~~l~~~~~~s  282 (286)
                      +.  ..|++|++.|++.++
T Consensus       239 ~~~~~~g~~~~v~gg~~~~  257 (257)
T PRK07067        239 DADYIVAQTYNVDGGNWMS  257 (257)
T ss_pred             ccccccCcEEeecCCEeCC
Confidence            43  458999999987653

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.88  E-value=4.7e-21  Score=160.95  Aligned_cols=210  Identities=17%  Similarity=0.150  Sum_probs=149.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCccccc------ccCCceeEEeccCCCHhHHHHHhc-------CC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRD------SWANNVIWHQGNLLSSDSWKEALD-------GV  122 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~------~~~~~~~~i~~Dl~d~~~~~~~~~-------~~  122 (286)
                      .++|+||||+|+||+++++.|+++|++|++++|+..+....      ....++.++.+|++|++++.++++       .+
T Consensus         2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (256)
T PRK12745          2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGRI   81 (256)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence            56899999999999999999999999999999875432111      113468999999999988777664       57


Q ss_pred             CEEEEccccCCC------------cchhhhhhhHHHHHHHHHHHHc-----C-----CCEEEEEecCCcCCCCccccchH
Q 023205          123 TAVISCVGGFGS------------NSYMYKINGTANINAIRAASEK-----G-----VKRFVYISAADFGVANYLLQGYY  180 (286)
Q Consensus       123 d~vi~~a~~~~~------------~~~~~~~~~~~~~~l~~~a~~~-----~-----v~~~v~~Ss~~~~~~~~~~~~y~  180 (286)
                      |+||||+|....            ....+++|+.++.++++++.+.     +     ..+||++||........+...|+
T Consensus        82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~  161 (256)
T PRK12745         82 DCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVSPNRGEYC  161 (256)
T ss_pred             CEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccCCCCCcccH
Confidence            999999986421            1245689999999888887542     1     46799999954323334567899


Q ss_pred             HHHHHHHHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHH
Q 023205          181 EGKRAAETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTV  254 (286)
Q Consensus       181 ~sK~~~E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D  254 (286)
                      .+|...|.+++.      ..|++++++|||.+.++.....           ...+...... ...|.     ..|.+++|
T Consensus       162 ~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~-----------~~~~~~~~~~-~~~~~-----~~~~~~~d  224 (256)
T PRK12745        162 ISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTAPV-----------TAKYDALIAK-GLVPM-----PRWGEPED  224 (256)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCcccccc-----------chhHHhhhhh-cCCCc-----CCCcCHHH
Confidence            999999987653      3689999999999987643211           0111111110 11121     34679999


Q ss_pred             HHHHHHHHhcCCC--CCCCeeEeccccccc
Q 023205          255 VAKVAVRAATDPV--FPPGIVDVHGILRYS  282 (286)
Q Consensus       255 va~~~~~~l~~~~--~~~~~~~l~~~~~~s  282 (286)
                      +++++..++....  ..|+.|++.|....+
T Consensus       225 ~a~~i~~l~~~~~~~~~G~~~~i~gg~~~~  254 (256)
T PRK12745        225 VARAVAALASGDLPYSTGQAIHVDGGLSIP  254 (256)
T ss_pred             HHHHHHHHhCCcccccCCCEEEECCCeecc
Confidence            9999999886542  357899999876653

>PRK06914 short chain dehydrogenase; Provisional

Probab=99.88  E-value=1.5e-21  Score=166.26  Aligned_cols=219  Identities=15%  Similarity=0.076  Sum_probs=149.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc------c-ccCCceeEEeccCCCHhHHHHHh-------cC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------D-SWANNVIWHQGNLLSSDSWKEAL-------DG  121 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~------~-~~~~~~~~i~~Dl~d~~~~~~~~-------~~  121 (286)
                      +++++||||+|++|+++++.|+++|++|++++|+.+....      . ....+++++.+|++|+++++. +       ..
T Consensus         3 ~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~~~   81 (280)
T PRK06914          3 KKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEIGR   81 (280)
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhcCC
Confidence            4679999999999999999999999999999998654211      0 112478999999999988765 4       34


Q ss_pred             CCEEEEccccCCCc----------chhhhhhhHHHHHHHHHH----HHcCCCEEEEEecCCcCCCCccccchHHHHHHHH
Q 023205          122 VTAVISCVGGFGSN----------SYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKRAAE  187 (286)
Q Consensus       122 ~d~vi~~a~~~~~~----------~~~~~~~~~~~~~l~~~a----~~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E  187 (286)
                      +|+||||+|.....          ...+++|+.++.++++.+    ++.+.++||++||........+...|+.+|...|
T Consensus        82 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~~~~  161 (280)
T PRK06914         82 IDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISGRVGFPGLSPYVSSKYALE  161 (280)
T ss_pred             eeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcccccCCCCCCchhHHhHHHHH
Confidence            79999999864321          234578899988887775    5566789999999533333345678999999999


Q ss_pred             HHHHH------hCCCcEEEEeeCeeecCCCCCcccc---CccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHH
Q 023205          188 TELLT------RYPYGGVILRPGFIYGTRTVGGMKL---PLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKV  258 (286)
Q Consensus       188 ~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~  258 (286)
                      .++..      ..|++++++|||.+.++........   ...........+.......      ......+++++|+|++
T Consensus       162 ~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~dva~~  235 (280)
T PRK06914        162 GFSESLRLELKPFGIDVALIEPGSYNTNIWEVGKQLAENQSETTSPYKEYMKKIQKHI------NSGSDTFGNPIDVANL  235 (280)
T ss_pred             HHHHHHHHHhhhhCCEEEEEecCCcccchhhccccccccccccccchHHHHHHHHHHH------hhhhhccCCHHHHHHH
Confidence            86653      4589999999999987643211100   0000000011111111000      0112356899999999


Q ss_pred             HHHHhcCCCCCCCeeEeccccccc
Q 023205          259 AVRAATDPVFPPGIVDVHGILRYS  282 (286)
Q Consensus       259 ~~~~l~~~~~~~~~~~l~~~~~~s  282 (286)
                      ++.++.++.. ...|++++...++
T Consensus       236 ~~~~~~~~~~-~~~~~~~~~~~~~  258 (280)
T PRK06914        236 IVEIAESKRP-KLRYPIGKGVKLM  258 (280)
T ss_pred             HHHHHcCCCC-CcccccCCchHHH
Confidence            9999998775 3578887665543

>PRK12829 short chain dehydrogenase; Provisional

Probab=99.88  E-value=2.6e-21  Score=163.19  Aligned_cols=218  Identities=17%  Similarity=0.133  Sum_probs=147.7

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc---cccCCceeEEeccCCCHhHHHHHhc-------CCCE
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR---DSWANNVIWHQGNLLSSDSWKEALD-------GVTA  124 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~---~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d~  124 (286)
                      +.+++|||||+|++|++++++|+++|++|+++.|+.+....   .....++.++.+|+.|++.+.++++       ++|+
T Consensus        10 ~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   89 (264)
T PRK12829         10 DGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVERFGGLDV   89 (264)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            35799999999999999999999999999999998643211   1111256889999999998877664       6899


Q ss_pred             EEEccccCCC-----------cchhhhhhhHHHHHHHHHHH----HcCC-CEEEEEecCCcCCCCccccchHHHHHHHHH
Q 023205          125 VISCVGGFGS-----------NSYMYKINGTANINAIRAAS----EKGV-KRFVYISAADFGVANYLLQGYYEGKRAAET  188 (286)
Q Consensus       125 vi~~a~~~~~-----------~~~~~~~~~~~~~~l~~~a~----~~~v-~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~  188 (286)
                      |||++|....           ....++.|+.++.++++++.    +.+. ++|+++||............|+.+|...|.
T Consensus        90 vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~~~~~~~~~y~~~K~a~~~  169 (264)
T PRK12829         90 LVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRLGYPGRTPYAASKWAVVG  169 (264)
T ss_pred             EEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEecccccccCCCCCchhHHHHHHHHH
Confidence            9999987621           13456889999988888763    3444 568888874322222334579999999998


Q ss_pred             HHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCc-hHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHH
Q 023205          189 ELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGS-PMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVR  261 (286)
Q Consensus       189 ~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~  261 (286)
                      ++..      ..+++++++|||+++++.............+. .........   ..++     ...+++++|+|+++..
T Consensus       170 ~~~~l~~~~~~~~i~~~~l~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-----~~~~~~~~d~a~~~~~  241 (264)
T PRK12829        170 LVKSLAIELGPLGIRVNAILPGIVRGPRMRRVIEARAQQLGIGLDEMEQEYL---EKIS-----LGRMVEPEDIAATALF  241 (264)
T ss_pred             HHHHHHHHHhhcCeEEEEEecCCcCChHHHHHhhhhhhccCCChhHHHHHHH---hcCC-----CCCCCCHHHHHHHHHH
Confidence            7754      35899999999999987642211000000000 000000000   0111     2358999999999999


Q ss_pred             HhcCC--CCCCCeeEeccccc
Q 023205          262 AATDP--VFPPGIVDVHGILR  280 (286)
Q Consensus       262 ~l~~~--~~~~~~~~l~~~~~  280 (286)
                      ++...  ...++.|++++...
T Consensus       242 l~~~~~~~~~g~~~~i~~g~~  262 (264)
T PRK12829        242 LASPAARYITGQAISVDGNVE  262 (264)
T ss_pred             HcCccccCccCcEEEeCCCcc
Confidence            88642  33578999988754

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=99.88  E-value=8.4e-21  Score=159.44  Aligned_cols=212  Identities=14%  Similarity=0.095  Sum_probs=152.2

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc---c--ccCCceeEEeccCCCHhHHHHHhc-------CC
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR---D--SWANNVIWHQGNLLSSDSWKEALD-------GV  122 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~---~--~~~~~~~~i~~Dl~d~~~~~~~~~-------~~  122 (286)
                      ..++||||||+|+||++++++|+++|++|++++|+.++...   .  ....++.++.+|++|.++++++++       .+
T Consensus         9 ~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   88 (255)
T PRK07523          9 TGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIGPI   88 (255)
T ss_pred             CCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence            35799999999999999999999999999999998654211   0  112357889999999998888775       37


Q ss_pred             CEEEEccccCCC------c----chhhhhhhHHHHHHHHHHHH----cCCCEEEEEecCCcCCCCccccchHHHHHHHHH
Q 023205          123 TAVISCVGGFGS------N----SYMYKINGTANINAIRAASE----KGVKRFVYISAADFGVANYLLQGYYEGKRAAET  188 (286)
Q Consensus       123 d~vi~~a~~~~~------~----~~~~~~~~~~~~~l~~~a~~----~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~  188 (286)
                      |+|||++|....      +    ...+++|+.++.++++++.+    .+.++||++||............|+.+|...|.
T Consensus        89 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~~sK~a~~~  168 (255)
T PRK07523         89 DILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSALARPGIAPYTATKGAVGN  168 (255)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhccCCCCCccHHHHHHHHHH
Confidence            999999986421      1    24567999999999888864    356799999995333333456789999999998


Q ss_pred             HHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHH
Q 023205          189 ELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRA  262 (286)
Q Consensus       189 ~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~  262 (286)
                      +++.      ..|++++++|||.+.++......       ..  ..+......  ..|     ...+..++|+|++++.+
T Consensus       169 ~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~-------~~--~~~~~~~~~--~~~-----~~~~~~~~dva~~~~~l  232 (255)
T PRK07523        169 LTKGMATDWAKHGLQCNAIAPGYFDTPLNAALV-------AD--PEFSAWLEK--RTP-----AGRWGKVEELVGACVFL  232 (255)
T ss_pred             HHHHHHHHhhHhCeEEEEEEECcccCchhhhhc-------cC--HHHHHHHHh--cCC-----CCCCcCHHHHHHHHHHH
Confidence            7653      46899999999999877532110       00  011111111  112     12467899999999999


Q ss_pred             hcCCC--CCCCeeEeccccccc
Q 023205          263 ATDPV--FPPGIVDVHGILRYS  282 (286)
Q Consensus       263 l~~~~--~~~~~~~l~~~~~~s  282 (286)
                      +..+.  ..|+.+++.|+..+|
T Consensus       233 ~~~~~~~~~G~~i~~~gg~~~~  254 (255)
T PRK07523        233 ASDASSFVNGHVLYVDGGITAS  254 (255)
T ss_pred             cCchhcCccCcEEEECCCeecc
Confidence            97533  357899999886554

>PRK05875 short chain dehydrogenase; Provisional

Probab=99.88  E-value=5e-21  Score=162.64  Aligned_cols=210  Identities=19%  Similarity=0.211  Sum_probs=149.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc---cc--c--CCceeEEeccCCCHhHHHHHhc-------C
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR---DS--W--ANNVIWHQGNLLSSDSWKEALD-------G  121 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~---~~--~--~~~~~~i~~Dl~d~~~~~~~~~-------~  121 (286)
                      .++++||||+|+||+++++.|+++|++|+++.|+.++...   +.  .  ..++.++.+|+.|++++.++++       .
T Consensus         7 ~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   86 (276)
T PRK05875          7 DRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWHGR   86 (276)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            4799999999999999999999999999999998644211   10  0  2468889999999998887775       5


Q ss_pred             CCEEEEccccCCC-----------cchhhhhhhHHHHHHHHHHHHc----CCCEEEEEecCCcCCCCccccchHHHHHHH
Q 023205          122 VTAVISCVGGFGS-----------NSYMYKINGTANINAIRAASEK----GVKRFVYISAADFGVANYLLQGYYEGKRAA  186 (286)
Q Consensus       122 ~d~vi~~a~~~~~-----------~~~~~~~~~~~~~~l~~~a~~~----~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~  186 (286)
                      +|+|||++|....           ....+++|+.+..++++++.+.    +..+|+++||........+...|+.+|...
T Consensus        87 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sK~a~  166 (276)
T PRK05875         87 LHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASNTHRWFGAYGVTKSAV  166 (276)
T ss_pred             CCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcCCCCCCcchHHHHHHH
Confidence            7999999985321           1245678899998888876543    345899999964333344567899999999


Q ss_pred             HHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHH
Q 023205          187 ETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAV  260 (286)
Q Consensus       187 E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~  260 (286)
                      |.+++.      ..+++++++|||.+.++......       . ..........   ..|     ...+++++|+|+++.
T Consensus       167 ~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~~~-------~-~~~~~~~~~~---~~~-----~~~~~~~~dva~~~~  230 (276)
T PRK05875        167 DHLMKLAADELGPSWVRVNSIRPGLIRTDLVAPIT-------E-SPELSADYRA---CTP-----LPRVGEVEDVANLAM  230 (276)
T ss_pred             HHHHHHHHHHhcccCeEEEEEecCccCCccccccc-------c-CHHHHHHHHc---CCC-----CCCCcCHHHHHHHHH
Confidence            997763      35799999999988765432110       0 0011111110   111     123578999999999


Q ss_pred             HHhcCCCC--CCCeeEecccccc
Q 023205          261 RAATDPVF--PPGIVDVHGILRY  281 (286)
Q Consensus       261 ~~l~~~~~--~~~~~~l~~~~~~  281 (286)
                      .++.++..  .++++++.+++.+
T Consensus       231 ~l~~~~~~~~~g~~~~~~~g~~~  253 (276)
T PRK05875        231 FLLSDAASWITGQVINVDGGHML  253 (276)
T ss_pred             HHcCchhcCcCCCEEEECCCeec
Confidence            99987553  4789999988765

>PRK09134 short chain dehydrogenase; Provisional

Probab=99.87  E-value=2.8e-20  Score=156.50  Aligned_cols=211  Identities=15%  Similarity=0.068  Sum_probs=149.8

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc------cccCCceeEEeccCCCHhHHHHHhc-------
Q 023205           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD-------  120 (286)
Q Consensus        54 ~~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~------~~~~~~~~~i~~Dl~d~~~~~~~~~-------  120 (286)
                      .++++++||||+|+||+++++.|+++|++|+++.|+..+...      .....++.++.+|++|.+++.++++       
T Consensus         7 ~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~   86 (258)
T PRK09134          7 AAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAALG   86 (258)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            346799999999999999999999999999988775432111      1113468899999999998887765       


Q ss_pred             CCCEEEEccccCCC----------cchhhhhhhHHHHHHHHHHHHc----CCCEEEEEecCCcCCCCccccchHHHHHHH
Q 023205          121 GVTAVISCVGGFGS----------NSYMYKINGTANINAIRAASEK----GVKRFVYISAADFGVANYLLQGYYEGKRAA  186 (286)
Q Consensus       121 ~~d~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~~~----~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~  186 (286)
                      .+|+||||||....          ....+++|+.++.++++++...    .-.++|+++|.....+.+....|+.+|...
T Consensus        87 ~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~~~p~~~~Y~~sK~a~  166 (258)
T PRK09134         87 PITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVWNLNPDFLSYTLSKAAL  166 (258)
T ss_pred             CCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhcCCCCCchHHHHHHHHH
Confidence            47999999986421          1345789999999998887653    235788888742222222345799999999


Q ss_pred             HHHHHH-----hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHH
Q 023205          187 ETELLT-----RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVR  261 (286)
Q Consensus       187 E~~~~~-----~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~  261 (286)
                      |.+.+.     ..++++++++||.+.......            ...+.....   ..+.     ....+++|+|++++.
T Consensus       167 ~~~~~~la~~~~~~i~v~~i~PG~v~t~~~~~------------~~~~~~~~~---~~~~-----~~~~~~~d~a~~~~~  226 (258)
T PRK09134        167 WTATRTLAQALAPRIRVNAIGPGPTLPSGRQS------------PEDFARQHA---ATPL-----GRGSTPEEIAAAVRY  226 (258)
T ss_pred             HHHHHHHHHHhcCCcEEEEeecccccCCcccC------------hHHHHHHHh---cCCC-----CCCcCHHHHHHHHHH
Confidence            886654     134899999999886542110            011111111   1111     124789999999999


Q ss_pred             HhcCCCCCCCeeEeccccccccc
Q 023205          262 AATDPVFPPGIVDVHGILRYSQK  284 (286)
Q Consensus       262 ~l~~~~~~~~~~~l~~~~~~s~~  284 (286)
                      +++.+...++.|.+.+...++|+
T Consensus       227 ~~~~~~~~g~~~~i~gg~~~~~~  249 (258)
T PRK09134        227 LLDAPSVTGQMIAVDGGQHLAWL  249 (258)
T ss_pred             HhcCCCcCCCEEEECCCeecccc
Confidence            99987777899999998888886

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.87  E-value=8e-21  Score=159.14  Aligned_cols=213  Identities=11%  Similarity=0.029  Sum_probs=149.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCccccc------ccCCceeEEeccCCCHhHHHHHhc-------CC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRD------SWANNVIWHQGNLLSSDSWKEALD-------GV  122 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~------~~~~~~~~i~~Dl~d~~~~~~~~~-------~~  122 (286)
                      +++|+||||+|+||++++++|+++|++|++..|+.......      ....++.++.+|+++++++..+++       .+
T Consensus         6 ~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   85 (252)
T PRK06077          6 DKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRYGVA   85 (252)
T ss_pred             CcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHcCCC
Confidence            47899999999999999999999999998887654321111      112356788999999988777664       57


Q ss_pred             CEEEEccccCCC------c----chhhhhhhHHHHHHHHHHHHc--CCCEEEEEecCCcCCCCccccchHHHHHHHHHHH
Q 023205          123 TAVISCVGGFGS------N----SYMYKINGTANINAIRAASEK--GVKRFVYISAADFGVANYLLQGYYEGKRAAETEL  190 (286)
Q Consensus       123 d~vi~~a~~~~~------~----~~~~~~~~~~~~~l~~~a~~~--~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~  190 (286)
                      |+|||++|....      .    ...+++|+.+..++++++.+.  ...+||++||...-....+...|+.+|...|.++
T Consensus        86 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~~~~~~~  165 (252)
T PRK06077         86 DILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAGIRPAYGLSIYGAMKAAVINLT  165 (252)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhccCCCCCchHHHHHHHHHHHHH
Confidence            999999986321      1    245688999998888887653  2258999999533233455678999999999877


Q ss_pred             HH-----hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcC
Q 023205          191 LT-----RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATD  265 (286)
Q Consensus       191 ~~-----~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~  265 (286)
                      +.     ..++.+.+++||.+.++........    .+.....+..      .++    ....+++++|+|++++.++..
T Consensus       166 ~~l~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~----~~~~~~~~~~------~~~----~~~~~~~~~dva~~~~~~~~~  231 (252)
T PRK06077        166 KYLALELAPKIRVNAIAPGFVKTKLGESLFKV----LGMSEKEFAE------KFT----LMGKILDPEEVAEFVAAILKI  231 (252)
T ss_pred             HHHHHHHhcCCEEEEEeeCCccChHHHhhhhc----ccccHHHHHH------hcC----cCCCCCCHHHHHHHHHHHhCc
Confidence            63     2379999999999976543111000    0000000000      111    123579999999999999987


Q ss_pred             CCCCCCeeEeccccccc
Q 023205          266 PVFPPGIVDVHGILRYS  282 (286)
Q Consensus       266 ~~~~~~~~~l~~~~~~s  282 (286)
                      +...+++|++.++..+-
T Consensus       232 ~~~~g~~~~i~~g~~~~  248 (252)
T PRK06077        232 ESITGQVFVLDSGESLK  248 (252)
T ss_pred             cccCCCeEEecCCeecc
Confidence            76678999999887653

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.87  E-value=1.5e-20  Score=157.34  Aligned_cols=210  Identities=14%  Similarity=0.059  Sum_probs=147.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEE-EecCCCcccc-----cccCCceeEEeccCCCHhHHHHHhc-------CC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVAS-LSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------GV  122 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~-l~R~~~~~~~-----~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~  122 (286)
                      +++++||||+|+||+++++.|+++|++|++ +.|+..+...     +....++.++.+|++|++++.++++       .+
T Consensus         4 ~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   83 (250)
T PRK08063          4 GKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFGRL   83 (250)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            468999999999999999999999999876 4666433111     1113468899999999998887775       47


Q ss_pred             CEEEEccccCCCc----------chhhhhhhHHHHHHHHHHHH----cCCCEEEEEecCCcCCCCccccchHHHHHHHHH
Q 023205          123 TAVISCVGGFGSN----------SYMYKINGTANINAIRAASE----KGVKRFVYISAADFGVANYLLQGYYEGKRAAET  188 (286)
Q Consensus       123 d~vi~~a~~~~~~----------~~~~~~~~~~~~~l~~~a~~----~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~  188 (286)
                      |+|||++|.....          ...+++|..++.++++++.+    .+.++||++||........+...|+.+|...|.
T Consensus        84 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~sK~a~~~  163 (250)
T PRK08063         84 DVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIRYLENYTTVGVSKAALEA  163 (250)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhccCCCCccHHHHHHHHHHH
Confidence            9999999864211          12457889998888887764    345699999995433333456789999999999


Q ss_pred             HHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHH
Q 023205          189 ELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRA  262 (286)
Q Consensus       189 ~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~  262 (286)
                      +++.      ..|+++++++||.+..+.....        ....+.......   ..+     ...+++++|+|++++.+
T Consensus       164 ~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~~--------~~~~~~~~~~~~---~~~-----~~~~~~~~dva~~~~~~  227 (250)
T PRK08063        164 LTRYLAVELAPKGIAVNAVSGGAVDTDALKHF--------PNREELLEDARA---KTP-----AGRMVEPEDVANAVLFL  227 (250)
T ss_pred             HHHHHHHHHhHhCeEEEeEecCcccCchhhhc--------cCchHHHHHHhc---CCC-----CCCCcCHHHHHHHHHHH
Confidence            7753      4689999999999976542110        000111111110   111     12468999999999999


Q ss_pred             hcCCC--CCCCeeEecccccc
Q 023205          263 ATDPV--FPPGIVDVHGILRY  281 (286)
Q Consensus       263 l~~~~--~~~~~~~l~~~~~~  281 (286)
                      +..+.  ..|+.+++.|+..+
T Consensus       228 ~~~~~~~~~g~~~~~~gg~~~  248 (250)
T PRK08063        228 CSPEADMIRGQTIIVDGGRSL  248 (250)
T ss_pred             cCchhcCccCCEEEECCCeee
Confidence            97643  35889999887543

>PRK07775 short chain dehydrogenase; Provisional

Probab=99.87  E-value=2.2e-20  Score=158.55  Aligned_cols=209  Identities=14%  Similarity=0.069  Sum_probs=143.1

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc-----cccCCceeEEeccCCCHhHHHHHhc-------CC
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------GV  122 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~-----~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~  122 (286)
                      .+++++||||+|+||++++++|+++|++|+++.|+......     .....++.++.+|++|.+++.++++       ++
T Consensus         9 ~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   88 (274)
T PRK07775          9 DRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGEI   88 (274)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence            35789999999999999999999999999999987543211     0112367888999999998887765       57


Q ss_pred             CEEEEccccCCC------c----chhhhhhhHHHHHHHHHHH----HcCCCEEEEEecCCcCCCCccccchHHHHHHHHH
Q 023205          123 TAVISCVGGFGS------N----SYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEGKRAAET  188 (286)
Q Consensus       123 d~vi~~a~~~~~------~----~~~~~~~~~~~~~l~~~a~----~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~  188 (286)
                      |+|||+||....      .    ...+++|+.++.++++.+.    +.+..+||++||............|+.+|...|.
T Consensus        89 d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~  168 (274)
T PRK07775         89 EVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVALRQRPHMGAYGAAKAGLEA  168 (274)
T ss_pred             CEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhcCCCCCcchHHHHHHHHHH
Confidence            999999986431      1    1345789999998887764    3445689999995322223345679999999998


Q ss_pred             HHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHH
Q 023205          189 ELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRA  262 (286)
Q Consensus       189 ~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~  262 (286)
                      ++..      ..|++++++|||.+.++.....  .+    ......+.....    ..  +.....+++++|+|++++.+
T Consensus       169 l~~~~~~~~~~~gi~v~~v~pG~~~t~~~~~~--~~----~~~~~~~~~~~~----~~--~~~~~~~~~~~dva~a~~~~  236 (274)
T PRK07775        169 MVTNLQMELEGTGVRASIVHPGPTLTGMGWSL--PA----EVIGPMLEDWAK----WG--QARHDYFLRASDLARAITFV  236 (274)
T ss_pred             HHHHHHHHhcccCeEEEEEeCCcccCcccccC--Ch----hhhhHHHHHHHH----hc--ccccccccCHHHHHHHHHHH
Confidence            7753      2489999999998754422110  00    000111111110    00  11234589999999999999


Q ss_pred             hcCCCCCCCeeEec
Q 023205          263 ATDPVFPPGIVDVH  276 (286)
Q Consensus       263 l~~~~~~~~~~~l~  276 (286)
                      +..+. .+.+||+.
T Consensus       237 ~~~~~-~~~~~~~~  249 (274)
T PRK07775        237 AETPR-GAHVVNME  249 (274)
T ss_pred             hcCCC-CCCeeEEe
Confidence            98764 24567764

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.87  E-value=1.4e-20  Score=159.59  Aligned_cols=206  Identities=25%  Similarity=0.224  Sum_probs=155.9

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccccCCCcc
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFGSNS  136 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~~~~~~  136 (286)
                      ++||||||||++|++++++|+++|++|++++|+++......  .++++..+|+.++..+...++|+|.++++.+... ..
T Consensus         1 ~~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~--~~v~~~~~d~~~~~~l~~a~~G~~~~~~i~~~~~-~~   77 (275)
T COG0702           1 MKILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA--GGVEVVLGDLRDPKSLVAGAKGVDGVLLISGLLD-GS   77 (275)
T ss_pred             CeEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc--CCcEEEEeccCCHhHHHHHhccccEEEEEecccc-cc
Confidence            47999999999999999999999999999999987744333  7899999999999999999999999999988765 22


Q ss_pred             -hhhhhhhHHHHHHHHHHHHcCCCEEEEEecCCcCCCCccccchHHHHHHHHHHHHHhCCCcEEEEeeCeeecCCCCCcc
Q 023205          137 -YMYKINGTANINAIRAASEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLTRYPYGGVILRPGFIYGTRTVGGM  215 (286)
Q Consensus       137 -~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~~~~g~~~~ilRp~~v~g~~~~~~~  215 (286)
                       ...........+..+.+. .++++++++|..  +........|..+|...|+.+.+ .|++++++|+..+|.....   
T Consensus        78 ~~~~~~~~~~~~~~a~~a~-~~~~~~~~~s~~--~~~~~~~~~~~~~~~~~e~~l~~-sg~~~t~lr~~~~~~~~~~---  150 (275)
T COG0702          78 DAFRAVQVTAVVRAAEAAG-AGVKHGVSLSVL--GADAASPSALARAKAAVEAALRS-SGIPYTTLRRAAFYLGAGA---  150 (275)
T ss_pred             cchhHHHHHHHHHHHHHhc-CCceEEEEeccC--CCCCCCccHHHHHHHHHHHHHHh-cCCCeEEEecCeeeeccch---
Confidence             234444444444444443 457788888884  44445667899999999997776 9999999997777654321   


Q ss_pred             ccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcCCCCCCCeeEecccccccc
Q 023205          216 KLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDPVFPPGIVDVHGILRYSQ  283 (286)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~l~~~~~~s~  283 (286)
                               .. ....... ..++...+.+..+++..+|++.++...+..+...+++|.+.+|+.++.
T Consensus       151 ---------~~-~~~~~~~-~~~~~~~~~~~~~~i~~~d~a~~~~~~l~~~~~~~~~~~l~g~~~~~~  207 (275)
T COG0702         151 ---------AF-IEAAEAA-GLPVIPRGIGRLSPIAVDDVAEALAAALDAPATAGRTYELAGPEALTL  207 (275)
T ss_pred             ---------hH-HHHHHhh-CCceecCCCCceeeeEHHHHHHHHHHHhcCCcccCcEEEccCCceecH
Confidence                     11 1111222 222222234478899999999999999998887799999999976654

>PRK12827 short chain dehydrogenase; Provisional

Probab=99.87  E-value=3.2e-20  Score=155.10  Aligned_cols=204  Identities=18%  Similarity=0.131  Sum_probs=146.4

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc---------cccCCceeEEeccCCCHhHHHHHhc-----
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR---------DSWANNVIWHQGNLLSSDSWKEALD-----  120 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~---------~~~~~~~~~i~~Dl~d~~~~~~~~~-----  120 (286)
                      ++++++||||+|+||++++++|+++|++|+++.|.......         .....++.++.+|+.|.+.++++++     
T Consensus         5 ~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   84 (249)
T PRK12827          5 DSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGVEE   84 (249)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            35789999999999999999999999999998775322110         1113468899999999998887764     


Q ss_pred             --CCCEEEEccccCCC----------cchhhhhhhHHHHHHHHHHH-----HcCCCEEEEEecCCcCCCCccccchHHHH
Q 023205          121 --GVTAVISCVGGFGS----------NSYMYKINGTANINAIRAAS-----EKGVKRFVYISAADFGVANYLLQGYYEGK  183 (286)
Q Consensus       121 --~~d~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~-----~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK  183 (286)
                        ++|+|||++|....          ....+++|+.++.++++++.     +.+.++||++||........+...|+.+|
T Consensus        85 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~sK  164 (249)
T PRK12827         85 FGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGVRGNRGQVNYAASK  164 (249)
T ss_pred             hCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchhcCCCCCCchhHHHH
Confidence              58999999987541          12456789999999999887     45667999999954333334567899999


Q ss_pred             HHHHHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHH
Q 023205          184 RAAETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAK  257 (286)
Q Consensus       184 ~~~E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~  257 (286)
                      ...+.+++.      ..+++++++|||.+.++......         ....+..      ..+     ...+.+++|+|+
T Consensus       165 ~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~---------~~~~~~~------~~~-----~~~~~~~~~va~  224 (249)
T PRK12827        165 AGLIGLTKTLANELAPRGITVNAVAPGAINTPMADNAA---------PTEHLLN------PVP-----VQRLGEPDEVAA  224 (249)
T ss_pred             HHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCcccccc---------hHHHHHh------hCC-----CcCCcCHHHHHH
Confidence            988876653      35899999999999987542210         0011111      011     112458899999


Q ss_pred             HHHHHhcCCC--CCCCeeEeccc
Q 023205          258 VAVRAATDPV--FPPGIVDVHGI  278 (286)
Q Consensus       258 ~~~~~l~~~~--~~~~~~~l~~~  278 (286)
                      +++.++.+..  ..++.+++.++
T Consensus       225 ~~~~l~~~~~~~~~g~~~~~~~g  247 (249)
T PRK12827        225 LVAFLVSDAASYVTGQVIPVDGG  247 (249)
T ss_pred             HHHHHcCcccCCccCcEEEeCCC
Confidence            9999886543  34678888765

>PRK06182 short chain dehydrogenase; Validated

Probab=99.87  E-value=1.5e-20  Score=159.59  Aligned_cols=212  Identities=17%  Similarity=0.048  Sum_probs=142.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhc-------CCCEEEEc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD-------GVTAVISC  128 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d~vi~~  128 (286)
                      +++|+||||+|+||++++++|+++|++|++++|+.++. ......+++++.+|++|.++++++++       ++|+||||
T Consensus         3 ~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l-~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~li~~   81 (273)
T PRK06182          3 KKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKM-EDLASLGVHPLSLDVTDEASIKAAVDTIIAEEGRIDVLVNN   81 (273)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHhCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEEC
Confidence            46899999999999999999999999999999986542 22223468899999999999888775       68999999


Q ss_pred             cccCCC----------cchhhhhhhHHHH----HHHHHHHHcCCCEEEEEecCCcCCCCccccchHHHHHHHHHHHH---
Q 023205          129 VGGFGS----------NSYMYKINGTANI----NAIRAASEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELL---  191 (286)
Q Consensus       129 a~~~~~----------~~~~~~~~~~~~~----~l~~~a~~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~---  191 (286)
                      +|....          ....+++|+.+..    .+++.+++.+..+||++||.......+....|+.+|...+.+..   
T Consensus        82 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaa~~~~~~~l~  161 (273)
T PRK06182         82 AGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSGRIINISSMGGKIYTPLGAWYHATKFALEGFSDALR  161 (273)
T ss_pred             CCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcCCCCCccHhHHHHHHHHHHHHHHH
Confidence            986531          1345678888754    44555666777799999995322223334579999999998653   


Q ss_pred             ---HhCCCcEEEEeeCeeecCCCCCcc-ccCccccCc-hH---HHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHh
Q 023205          192 ---TRYPYGGVILRPGFIYGTRTVGGM-KLPLGVIGS-PM---EMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAA  263 (286)
Q Consensus       192 ---~~~g~~~~ilRp~~v~g~~~~~~~-~~~~~~~~~-~~---~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l  263 (286)
                         +..|+++++++||.+.++...... ......... ..   ..+.......       .....+.+.+|+|++++.++
T Consensus       162 ~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~vA~~i~~~~  234 (273)
T PRK06182        162 LEVAPFGIDVVVIEPGGIKTEWGDIAADHLLKTSGNGAYAEQAQAVAASMRST-------YGSGRLSDPSVIADAISKAV  234 (273)
T ss_pred             HHhcccCCEEEEEecCCcccccchhhhhhhcccccccchHHHHHHHHHHHHHh-------hccccCCCHHHHHHHHHHHH
Confidence               246899999999999876431100 000000000 00   0000010000       01234679999999999999


Q ss_pred             cCCCCCCCeeEec
Q 023205          264 TDPVFPPGIVDVH  276 (286)
Q Consensus       264 ~~~~~~~~~~~l~  276 (286)
                      ..... ...|.++
T Consensus       235 ~~~~~-~~~~~~g  246 (273)
T PRK06182        235 TARRP-KTRYAVG  246 (273)
T ss_pred             hCCCC-CceeecC
Confidence            86432 3455543

>PRK07774 short chain dehydrogenase; Provisional

Probab=99.87  E-value=2e-20  Score=156.62  Aligned_cols=208  Identities=18%  Similarity=0.136  Sum_probs=148.0

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc---c--ccCCceeEEeccCCCHhHHHHHhc-------CC
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR---D--SWANNVIWHQGNLLSSDSWKEALD-------GV  122 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~---~--~~~~~~~~i~~Dl~d~~~~~~~~~-------~~  122 (286)
                      +.++++||||+|+||.+++++|+++|++|++++|+.+....   .  ....++.++.+|++|.++++++++       .+
T Consensus         5 ~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   84 (250)
T PRK07774          5 DDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFGGI   84 (250)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence            35789999999999999999999999999999998643211   1  112367789999999988877665       57


Q ss_pred             CEEEEccccCCC-------------cchhhhhhhHHHHHHHHHHHHc----CCCEEEEEecCCcCCCCccccchHHHHHH
Q 023205          123 TAVISCVGGFGS-------------NSYMYKINGTANINAIRAASEK----GVKRFVYISAADFGVANYLLQGYYEGKRA  185 (286)
Q Consensus       123 d~vi~~a~~~~~-------------~~~~~~~~~~~~~~l~~~a~~~----~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~  185 (286)
                      |+|||++|....             ....+++|+.++.++++++...    +.++||++||...   ..+.+.|+.+|..
T Consensus        85 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~---~~~~~~Y~~sK~a  161 (250)
T PRK07774         85 DYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAA---WLYSNFYGLAKVG  161 (250)
T ss_pred             CEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccc---cCCccccHHHHHH
Confidence            999999996421             1234679999999988887653    3568999999421   1245689999999


Q ss_pred             HHHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHH
Q 023205          186 AETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVA  259 (286)
Q Consensus       186 ~E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~  259 (286)
                      .|.+++.      ..++.+++++||.+..+.....  .+       .........   .++.     ..+.+++|+|+++
T Consensus       162 ~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~--~~-------~~~~~~~~~---~~~~-----~~~~~~~d~a~~~  224 (250)
T PRK07774        162 LNGLTQQLARELGGMNIRVNAIAPGPIDTEATRTV--TP-------KEFVADMVK---GIPL-----SRMGTPEDLVGMC  224 (250)
T ss_pred             HHHHHHHHHHHhCccCeEEEEEecCcccCcccccc--CC-------HHHHHHHHh---cCCC-----CCCcCHHHHHHHH
Confidence            9987753      3579999999998876653211  01       011111111   1111     1245789999999


Q ss_pred             HHHhcCCC--CCCCeeEeccccccc
Q 023205          260 VRAATDPV--FPPGIVDVHGILRYS  282 (286)
Q Consensus       260 ~~~l~~~~--~~~~~~~l~~~~~~s  282 (286)
                      +.++....  ..+++|++.+++.++
T Consensus       225 ~~~~~~~~~~~~g~~~~v~~g~~~~  249 (250)
T PRK07774        225 LFLLSDEASWITGQIFNVDGGQIIR  249 (250)
T ss_pred             HHHhChhhhCcCCCEEEECCCeecc
Confidence            99987642  357899999987654

>PRK07060 short chain dehydrogenase; Provisional

Probab=99.87  E-value=9.5e-21  Score=158.01  Aligned_cols=208  Identities=15%  Similarity=0.100  Sum_probs=148.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhc---CCCEEEEccccC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD---GVTAVISCVGGF  132 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~---~~d~vi~~a~~~  132 (286)
                      .++++|||++|++|+++++.|+++|++|++++|+.++........+..++.+|++|.+.+.++++   .+|+|||++|..
T Consensus         9 ~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~d~vi~~ag~~   88 (245)
T PRK07060          9 GKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGETGCEPLRLDVGDDAAIRAALAAAGAFDGLVNCAGIA   88 (245)
T ss_pred             CCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeEEEecCCCHHHHHHHHHHhCCCCEEEECCCCC
Confidence            46899999999999999999999999999999986542211112246788999999988888776   489999999864


Q ss_pred             CC----------cchhhhhhhHHHHHHHHHHHHc----C-CCEEEEEecCCcCCCCccccchHHHHHHHHHHHHH-----
Q 023205          133 GS----------NSYMYKINGTANINAIRAASEK----G-VKRFVYISAADFGVANYLLQGYYEGKRAAETELLT-----  192 (286)
Q Consensus       133 ~~----------~~~~~~~~~~~~~~l~~~a~~~----~-v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~~-----  192 (286)
                      ..          ....+++|+.++.++++++.+.    + .++||++||............|+.+|...|.+++.     
T Consensus        89 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~sK~a~~~~~~~~a~~~  168 (245)
T PRK07060         89 SLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGLPDHLAYCASKAALDAITRVLCVEL  168 (245)
T ss_pred             CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCCCCCCcHhHHHHHHHHHHHHHHHHHH
Confidence            21          1234568999999888877642    2 36899999953222234556799999999987753     


Q ss_pred             -hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcCCC--CC
Q 023205          193 -RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDPV--FP  269 (286)
Q Consensus       193 -~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~~--~~  269 (286)
                       ..+++++.+|||.+.++.....+..+     ...+.+..      ..+     ...+++++|+|++++.++..+.  ..
T Consensus       169 ~~~~i~v~~v~pg~v~~~~~~~~~~~~-----~~~~~~~~------~~~-----~~~~~~~~d~a~~~~~l~~~~~~~~~  232 (245)
T PRK07060        169 GPHGIRVNSVNPTVTLTPMAAEAWSDP-----QKSGPMLA------AIP-----LGRFAEVDDVAAPILFLLSDAASMVS  232 (245)
T ss_pred             hhhCeEEEEEeeCCCCCchhhhhccCH-----HHHHHHHh------cCC-----CCCCCCHHHHHHHHHHHcCcccCCcc
Confidence             35899999999999887543221000     00010110      111     2357899999999999997654  34


Q ss_pred             CCeeEecccc
Q 023205          270 PGIVDVHGIL  279 (286)
Q Consensus       270 ~~~~~l~~~~  279 (286)
                      |+.+++.+..
T Consensus       233 G~~~~~~~g~  242 (245)
T PRK07060        233 GVSLPVDGGY  242 (245)
T ss_pred             CcEEeECCCc
Confidence            7888888764

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.86  E-value=1.1e-20  Score=158.15  Aligned_cols=212  Identities=15%  Similarity=0.050  Sum_probs=147.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc--ccc--CCceeEEeccCCCHhHHHHHhc-------CCCE
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSW--ANNVIWHQGNLLSSDSWKEALD-------GVTA  124 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~--~~~--~~~~~~i~~Dl~d~~~~~~~~~-------~~d~  124 (286)
                      .++|+||||+|++|.+++++|+++|++|++++|+.++...  ...  ..++.++.+|+.|++++..+++       .+|+
T Consensus         5 ~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   84 (251)
T PRK07231          5 GKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGSVDI   84 (251)
T ss_pred             CcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCE
Confidence            4689999999999999999999999999999998754211  111  2458899999999999987775       4699


Q ss_pred             EEEccccCCC-----------cchhhhhhhHHHHHHHHHHH----HcCCCEEEEEecCCcCCCCccccchHHHHHHHHHH
Q 023205          125 VISCVGGFGS-----------NSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEGKRAAETE  189 (286)
Q Consensus       125 vi~~a~~~~~-----------~~~~~~~~~~~~~~l~~~a~----~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~  189 (286)
                      |||+++....           ....+++|+.++.++++.+.    +.+.++||++||.....+......|+.+|...+.+
T Consensus        85 vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~sk~~~~~~  164 (251)
T PRK07231         85 LVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLRPRPGLGWYNASKGAVITL  164 (251)
T ss_pred             EEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcCCCCCchHHHHHHHHHHHH
Confidence            9999986421           12356788888776666554    45678999999954333445567899999998886


Q ss_pred             HHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHh
Q 023205          190 LLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAA  263 (286)
Q Consensus       190 ~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l  263 (286)
                      ++.      ..++++++++||.+.++.......      ....+.......   ..     ....+++++|+|++++.++
T Consensus       165 ~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~------~~~~~~~~~~~~---~~-----~~~~~~~~~dva~~~~~l~  230 (251)
T PRK07231        165 TKALAAELGPDKIRVNAVAPVVVETGLLEAFMG------EPTPENRAKFLA---TI-----PLGRLGTPEDIANAALFLA  230 (251)
T ss_pred             HHHHHHHhhhhCeEEEEEEECccCCCcchhhhc------ccChHHHHHHhc---CC-----CCCCCcCHHHHHHHHHHHh
Confidence            653      348999999999996554221100      000011111111   11     1235689999999999999


Q ss_pred             cCCC--CCCCeeEecccccc
Q 023205          264 TDPV--FPPGIVDVHGILRY  281 (286)
Q Consensus       264 ~~~~--~~~~~~~l~~~~~~  281 (286)
                      ..+.  ..+..+.+.|...+
T Consensus       231 ~~~~~~~~g~~~~~~gg~~~  250 (251)
T PRK07231        231 SDEASWITGVTLVVDGGRCV  250 (251)
T ss_pred             CccccCCCCCeEEECCCccC
Confidence            7653  34677888876543

>PRK06179 short chain dehydrogenase; Provisional

Probab=99.86  E-value=4.9e-20  Score=156.07  Aligned_cols=209  Identities=16%  Similarity=0.109  Sum_probs=143.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcC-------CCEEEEc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDG-------VTAVISC  128 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~-------~d~vi~~  128 (286)
                      .++|+||||+|+||++++++|+++|++|++++|+.++...   ..+++++++|++|++++++++++       +|+||||
T Consensus         4 ~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~---~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~li~~   80 (270)
T PRK06179          4 SKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAP---IPGVELLELDVTDDASVQAAVDEVIARAGRIDVLVNN   80 (270)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc---cCCCeeEEeecCCHHHHHHHHHHHHHhCCCCCEEEEC
Confidence            4689999999999999999999999999999998654321   24788999999999998888764       6999999


Q ss_pred             cccCCC----------cchhhhhhhHHHHHHHHHH----HHcCCCEEEEEecCCcCCCCccccchHHHHHHHHHHHHH--
Q 023205          129 VGGFGS----------NSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLT--  192 (286)
Q Consensus       129 a~~~~~----------~~~~~~~~~~~~~~l~~~a----~~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~~--  192 (286)
                      +|....          ....+++|+.++.++++.+    ++.+.++||++||...-...+....|+.+|...|.++..  
T Consensus        81 ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~l~  160 (270)
T PRK06179         81 AGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGFLPAPYMALYAASKHAVEGYSESLD  160 (270)
T ss_pred             CCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECCccccCCCCCccHHHHHHHHHHHHHHHHH
Confidence            997531          1356788998988887774    556778999999953222233356799999999987653  


Q ss_pred             ----hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcCCCC
Q 023205          193 ----RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDPVF  268 (286)
Q Consensus       193 ----~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~~~  268 (286)
                          ..|+++++++||.+.++......... ..+... ..........  +   ..........+|+|++++.++..+..
T Consensus       161 ~el~~~gi~v~~v~pg~~~t~~~~~~~~~~-~~~~~~-~~~~~~~~~~--~---~~~~~~~~~~~~va~~~~~~~~~~~~  233 (270)
T PRK06179        161 HEVRQFGIRVSLVEPAYTKTNFDANAPEPD-SPLAEY-DRERAVVSKA--V---AKAVKKADAPEVVADTVVKAALGPWP  233 (270)
T ss_pred             HHHhhhCcEEEEEeCCCcccccccccCCCC-Ccchhh-HHHHHHHHHH--H---HhccccCCCHHHHHHHHHHHHcCCCC
Confidence                46999999999999876543221000 000000 0000000000  0   00112346789999999999987653


Q ss_pred             CCCeeEe
Q 023205          269 PPGIVDV  275 (286)
Q Consensus       269 ~~~~~~l  275 (286)
                       ...|..
T Consensus       234 -~~~~~~  239 (270)
T PRK06179        234 -KMRYTA  239 (270)
T ss_pred             -CeeEec
Confidence             344443

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=99.86  E-value=8.1e-21  Score=159.85  Aligned_cols=217  Identities=16%  Similarity=0.122  Sum_probs=146.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc---c---cc-CCceeEEeccCCCHhHHHHHhc-------C
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR---D---SW-ANNVIWHQGNLLSSDSWKEALD-------G  121 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~---~---~~-~~~~~~i~~Dl~d~~~~~~~~~-------~  121 (286)
                      .++|+||||+|+||.++++.|+++|++|++++|+......   .   .. ..++.++.+|++|.+++..+++       .
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   81 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGR   81 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            5689999999999999999999999999999998643211   1   01 1368899999999988876664       5


Q ss_pred             CCEEEEccccCCC----------cchhhhhhhHHHHHHHHHHHH----cC-CCEEEEEecCCcCCCCccccchHHHHHHH
Q 023205          122 VTAVISCVGGFGS----------NSYMYKINGTANINAIRAASE----KG-VKRFVYISAADFGVANYLLQGYYEGKRAA  186 (286)
Q Consensus       122 ~d~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~~----~~-v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~  186 (286)
                      +|+|||+||....          ....+++|+.++.++++++.+    .+ -.++|++||............|+.+|...
T Consensus        82 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sKaa~  161 (259)
T PRK12384         82 VDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFGG  161 (259)
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccccCCCCCchhHHHHHHH
Confidence            7999999986421          124557899998877776644    34 35899999843222223456799999998


Q ss_pred             HHHHHH------hCCCcEEEEeeCeeecCCCCCccccCcc--ccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHH
Q 023205          187 ETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLG--VIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKV  258 (286)
Q Consensus       187 E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~  258 (286)
                      +.+++.      ..|++++++|||.++++...... .+..  ..+...+......       ..+.....+++++|++++
T Consensus       162 ~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~dv~~~  233 (259)
T PRK12384        162 VGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQSL-LPQYAKKLGIKPDEVEQYY-------IDKVPLKRGCDYQDVLNM  233 (259)
T ss_pred             HHHHHHHHHHHHHcCcEEEEEecCCcccchhhhhh-hHHHHHhcCCChHHHHHHH-------HHhCcccCCCCHHHHHHH
Confidence            776542      57899999999988765432110 0000  0000000000000       011223567899999999


Q ss_pred             HHHHhcCCC--CCCCeeEeccccc
Q 023205          259 AVRAATDPV--FPPGIVDVHGILR  280 (286)
Q Consensus       259 ~~~~l~~~~--~~~~~~~l~~~~~  280 (286)
                      ++.++.+..  ..|++|++.+++.
T Consensus       234 ~~~l~~~~~~~~~G~~~~v~~g~~  257 (259)
T PRK12384        234 LLFYASPKASYCTGQSINVTGGQV  257 (259)
T ss_pred             HHHHcCcccccccCceEEEcCCEE
Confidence            999887543  3578999998765

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.86  E-value=2.2e-20  Score=157.00  Aligned_cols=204  Identities=11%  Similarity=0.039  Sum_probs=137.5

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc-----cccCCceeEEeccCCCHhHHHHHhc-CCCEEEEc
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-GVTAVISC  128 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~-----~~~~~~~~~i~~Dl~d~~~~~~~~~-~~d~vi~~  128 (286)
                      |+++||||||+|+||+++++.|+++|++|++++|+..+...     .....++.++.+|++|++.+.+++. ++|+||||
T Consensus         1 m~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~id~vi~~   80 (257)
T PRK09291          1 MSKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAEWDVDVLLNN   80 (257)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhcCCCCEEEEC
Confidence            35689999999999999999999999999999997543211     1113468899999999999998887 79999999


Q ss_pred             cccCCC----------cchhhhhhhHHHHHHHH----HHHHcCCCEEEEEecCCcCCCCccccchHHHHHHHHHHHHH--
Q 023205          129 VGGFGS----------NSYMYKINGTANINAIR----AASEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLT--  192 (286)
Q Consensus       129 a~~~~~----------~~~~~~~~~~~~~~l~~----~a~~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~~--  192 (286)
                      ||....          ....+++|+.+..++.+    .+++.+.++||++||............|+.+|...|.+.+.  
T Consensus        81 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~~Y~~sK~a~~~~~~~l~  160 (257)
T PRK09291         81 AGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFTSSMAGLITGPFTGAYCASKHALEAIAEAMH  160 (257)
T ss_pred             CCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEcChhhccCCCCcchhHHHHHHHHHHHHHHH
Confidence            986431          12346678877765544    44556678999999953222223456899999999986642  


Q ss_pred             ----hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCC-CCccCCCccHHHHHHHHHHHhcCCC
Q 023205          193 ----RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLV-GPLFTPPVNVTVVAKVAVRAATDPV  267 (286)
Q Consensus       193 ----~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~i~v~Dva~~~~~~l~~~~  267 (286)
                          ..|++++++|||.+..+...........+...          ....++.. +.....+++.+|+++.++.++..+.
T Consensus       161 ~~~~~~gi~~~~v~pg~~~t~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  230 (257)
T PRK09291        161 AELKPFGIQVATVNPGPYLTGFNDTMAETPKRWYDP----------ARNFTDPEDLAFPLEQFDPQEMIDAMVEVIPADT  230 (257)
T ss_pred             HHHHhcCcEEEEEecCcccccchhhhhhhhhhhcch----------hhHHHhhhhhhccccCCCHHHHHHHHHHHhcCCC
Confidence                46999999999987533211100000000000          00001110 1123356899999999999987765


Q ss_pred             C
Q 023205          268 F  268 (286)
Q Consensus       268 ~  268 (286)
                      .
T Consensus       231 ~  231 (257)
T PRK09291        231 G  231 (257)
T ss_pred             C
Confidence            3

>PRK12746 short chain dehydrogenase; Provisional

Probab=99.86  E-value=3e-20  Score=155.92  Aligned_cols=207  Identities=18%  Similarity=0.132  Sum_probs=144.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEE-ecCCCcccc---cc--cCCceeEEeccCCCHhHHHHHhc---------
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASL-SRSGRSSLR---DS--WANNVIWHQGNLLSSDSWKEALD---------  120 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l-~R~~~~~~~---~~--~~~~~~~i~~Dl~d~~~~~~~~~---------  120 (286)
                      .++|+||||+|+||++++++|+++|++|+++ .|+..+...   ..  ....+.++.+|++|++++.++++         
T Consensus         6 ~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~~   85 (254)
T PRK12746          6 GKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQIR   85 (254)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhccc
Confidence            4789999999999999999999999999875 565432110   11  12468899999999999887765         


Q ss_pred             ----CCCEEEEccccCCC------c----chhhhhhhHHHHHHHHHHHHc--CCCEEEEEecCCcCCCCccccchHHHHH
Q 023205          121 ----GVTAVISCVGGFGS------N----SYMYKINGTANINAIRAASEK--GVKRFVYISAADFGVANYLLQGYYEGKR  184 (286)
Q Consensus       121 ----~~d~vi~~a~~~~~------~----~~~~~~~~~~~~~l~~~a~~~--~v~~~v~~Ss~~~~~~~~~~~~y~~sK~  184 (286)
                          ++|+|||++|....      .    ...+++|+.++.++++.+.+.  ...+||++||............|+.+|.
T Consensus        86 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS~~~~~~~~~~~~Y~~sK~  165 (254)
T PRK12746         86 VGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISSAEVRLGFTGSIAYGLSKG  165 (254)
T ss_pred             cCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCHHhcCCCCCCcchHhhHH
Confidence                48999999986432      1    234568999999999988753  3358999998533233345567999999


Q ss_pred             HHHHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHH
Q 023205          185 AAETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKV  258 (286)
Q Consensus       185 ~~E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~  258 (286)
                      ..|.+...      ..++++++++||.+.++......  .    .   ..+.......       .....+++++|+|++
T Consensus       166 a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~~--~----~---~~~~~~~~~~-------~~~~~~~~~~dva~~  229 (254)
T PRK12746        166 ALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKLL--D----D---PEIRNFATNS-------SVFGRIGQVEDIADA  229 (254)
T ss_pred             HHHHHHHHHHHHHhhcCcEEEEEEECCccCcchhhhc--c----C---hhHHHHHHhc-------CCcCCCCCHHHHHHH
Confidence            99986542      36899999999999876432110  0    0   0011110000       112356789999999


Q ss_pred             HHHHhcCCC--CCCCeeEeccc
Q 023205          259 AVRAATDPV--FPPGIVDVHGI  278 (286)
Q Consensus       259 ~~~~l~~~~--~~~~~~~l~~~  278 (286)
                      +..++.++.  ..|++|++.+.
T Consensus       230 ~~~l~~~~~~~~~g~~~~i~~~  251 (254)
T PRK12746        230 VAFLASSDSRWVTGQIIDVSGG  251 (254)
T ss_pred             HHHHcCcccCCcCCCEEEeCCC
Confidence            998887653  35789999876

>PRK07074 short chain dehydrogenase; Provisional

Probab=99.86  E-value=3.3e-20  Score=155.97  Aligned_cols=210  Identities=16%  Similarity=0.092  Sum_probs=147.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc---cccCCceeEEeccCCCHhHHHHHhc-------CCCEE
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR---DSWANNVIWHQGNLLSSDSWKEALD-------GVTAV  125 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~---~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d~v  125 (286)
                      +++++||||+|+||.++++.|+++|++|++++|+..+...   .....+++++.+|+.|.+++..+++       ++|+|
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v   81 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAERGPVDVL   81 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            5689999999999999999999999999999998654211   1122468899999999998887775       47999


Q ss_pred             EEccccCCCc----------chhhhhhhHHHHHHHHHH----HHcCCCEEEEEecCCcCCCCccccchHHHHHHHHHHHH
Q 023205          126 ISCVGGFGSN----------SYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELL  191 (286)
Q Consensus       126 i~~a~~~~~~----------~~~~~~~~~~~~~l~~~a----~~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~  191 (286)
                      ||++|.....          ...+.+|+.+..++++++    .+.+.++||++||... ........|+.+|...|.++.
T Consensus        82 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~-~~~~~~~~y~~sK~a~~~~~~  160 (257)
T PRK07074         82 VANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNG-MAALGHPAYSAAKAGLIHYTK  160 (257)
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhh-cCCCCCcccHHHHHHHHHHHH
Confidence            9999864311          123468888888887777    3455678999999421 112223479999999998765


Q ss_pred             H------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcC
Q 023205          192 T------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATD  265 (286)
Q Consensus       192 ~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~  265 (286)
                      .      ..|++++++|||.+.++......       .....+......        .....++++++|++++++.++..
T Consensus       161 ~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~-------~~~~~~~~~~~~--------~~~~~~~~~~~d~a~~~~~l~~~  225 (257)
T PRK07074        161 LLAVEYGRFGIRANAVAPGTVKTQAWEARV-------AANPQVFEELKK--------WYPLQDFATPDDVANAVLFLASP  225 (257)
T ss_pred             HHHHHHhHhCeEEEEEEeCcCCcchhhccc-------ccChHHHHHHHh--------cCCCCCCCCHHHHHHHHHHHcCc
Confidence            3      35899999999999876432110       000111111110        11235789999999999999965


Q ss_pred             C--CCCCCeeEecccccc
Q 023205          266 P--VFPPGIVDVHGILRY  281 (286)
Q Consensus       266 ~--~~~~~~~~l~~~~~~  281 (286)
                      .  ...++.+++.+....
T Consensus       226 ~~~~~~g~~~~~~~g~~~  243 (257)
T PRK07074        226 AARAITGVCLPVDGGLTA  243 (257)
T ss_pred             hhcCcCCcEEEeCCCcCc
Confidence            3  334788888876554

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.86  E-value=9.4e-20  Score=152.06  Aligned_cols=207  Identities=19%  Similarity=0.168  Sum_probs=144.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc------cccCCceeEEeccCCCHhHHHHHhc-------CC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD-------GV  122 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~------~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~  122 (286)
                      .++|+|||++|++|+++++.|+++|++|+++.|+..+...      .....++.++.+|+.|.+++.++++       ++
T Consensus         5 ~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   84 (248)
T PRK05557          5 GKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEFGGV   84 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            4689999999999999999999999999999887653211      1123468899999999998887765       57


Q ss_pred             CEEEEccccCCCc----------chhhhhhhHHHHHHHHHHHH----cCCCEEEEEecCCcCCCCccccchHHHHHHHHH
Q 023205          123 TAVISCVGGFGSN----------SYMYKINGTANINAIRAASE----KGVKRFVYISAADFGVANYLLQGYYEGKRAAET  188 (286)
Q Consensus       123 d~vi~~a~~~~~~----------~~~~~~~~~~~~~l~~~a~~----~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~  188 (286)
                      |+|||+++.....          ...+.+|+.++.++++.+..    .+.++||++||............|+.+|...|.
T Consensus        85 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~~~~~~~~~y~~sk~a~~~  164 (248)
T PRK05557         85 DILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGLMGNPGQANYAASKAGVIG  164 (248)
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccCcCCCCCchhHHHHHHHHH
Confidence            9999999864321          23456888888888877764    355689999995322223345679999999887


Q ss_pred             HHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHH
Q 023205          189 ELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRA  262 (286)
Q Consensus       189 ~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~  262 (286)
                      +++.      ..++++++++||.+.++.....          ... +.......  .+     ...+++++|+|+++..+
T Consensus       165 ~~~~~a~~~~~~~i~~~~v~pg~~~~~~~~~~----------~~~-~~~~~~~~--~~-----~~~~~~~~~va~~~~~l  226 (248)
T PRK05557        165 FTKSLARELASRGITVNAVAPGFIETDMTDAL----------PED-VKEAILAQ--IP-----LGRLGQPEEIASAVAFL  226 (248)
T ss_pred             HHHHHHHHhhhhCeEEEEEecCccCCcccccc----------ChH-HHHHHHhc--CC-----CCCCcCHHHHHHHHHHH
Confidence            6643      4589999999998854432110          001 11111111  11     12357999999999998


Q ss_pred             hcC--CCCCCCeeEeccccc
Q 023205          263 ATD--PVFPPGIVDVHGILR  280 (286)
Q Consensus       263 l~~--~~~~~~~~~l~~~~~  280 (286)
                      +..  ....++.|++.+...
T Consensus       227 ~~~~~~~~~g~~~~i~~~~~  246 (248)
T PRK05557        227 ASDEAAYITGQTLHVNGGMV  246 (248)
T ss_pred             cCcccCCccccEEEecCCcc
Confidence            865  334578999987643

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=99.86  E-value=9.8e-20  Score=152.58  Aligned_cols=214  Identities=11%  Similarity=0.022  Sum_probs=149.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcC-------CCEEEEc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDG-------VTAVISC  128 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~-------~d~vi~~  128 (286)
                      .+++|||||+|+||++++++|+++|++|++++|+..    .....++.++++|+.|.+.+.+++++       +|+||||
T Consensus         8 ~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~~----~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~   83 (252)
T PRK08220          8 GKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAFL----TQEDYPFATFVLDVSDAAAVAQVCQRLLAETGPLDVLVNA   83 (252)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecchh----hhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            478999999999999999999999999999999861    11234688999999999988887753       7999999


Q ss_pred             cccCCC----------cchhhhhhhHHHHHHHHHHHH----cCCCEEEEEecCCcCCCCccccchHHHHHHHHHHHHH--
Q 023205          129 VGGFGS----------NSYMYKINGTANINAIRAASE----KGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLT--  192 (286)
Q Consensus       129 a~~~~~----------~~~~~~~~~~~~~~l~~~a~~----~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~~--  192 (286)
                      ++....          ....+++|+.+..++++++..    .+..+||++||........+...|+.+|...|.+++.  
T Consensus        84 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~la  163 (252)
T PRK08220         84 AGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAHVPRIGMAAYGASKAALTSLAKCVG  163 (252)
T ss_pred             CCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhccCCCCCchhHHHHHHHHHHHHHHH
Confidence            986531          124567899998888888743    3456899999954333334567899999999987743  


Q ss_pred             ----hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcCC--
Q 023205          193 ----RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDP--  266 (286)
Q Consensus       193 ----~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~--  266 (286)
                          ..++++++++||.+.++.....+..+. ...............  .     .....+++++|+|++++.++...  
T Consensus       164 ~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~-~~~~~~~~~~~~~~~--~-----~~~~~~~~~~dva~~~~~l~~~~~~  235 (252)
T PRK08220        164 LELAPYGVRCNVVSPGSTDTDMQRTLWVDED-GEQQVIAGFPEQFKL--G-----IPLGKIARPQEIANAVLFLASDLAS  235 (252)
T ss_pred             HHhhHhCeEEEEEecCcCcchhhhhhccchh-hhhhhhhhHHHHHhh--c-----CCCcccCCHHHHHHHHHHHhcchhc
Confidence                368999999999998875422110000 000000000000010  1     11235789999999999999653  


Q ss_pred             CCCCCeeEecccccc
Q 023205          267 VFPPGIVDVHGILRY  281 (286)
Q Consensus       267 ~~~~~~~~l~~~~~~  281 (286)
                      ...++++.+.|...+
T Consensus       236 ~~~g~~i~~~gg~~~  250 (252)
T PRK08220        236 HITLQDIVVDGGATL  250 (252)
T ss_pred             CccCcEEEECCCeec
Confidence            345778888876543

>PRK06128 oxidoreductase; Provisional

Probab=99.86  E-value=1.2e-19  Score=156.00  Aligned_cols=212  Identities=16%  Similarity=0.122  Sum_probs=150.4

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCccc-c------cccCCceeEEeccCCCHhHHHHHhc-------
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSL-R------DSWANNVIWHQGNLLSSDSWKEALD-------  120 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~-~------~~~~~~~~~i~~Dl~d~~~~~~~~~-------  120 (286)
                      .+++||||||+|+||+++++.|+++|++|++..|+.+... .      .....++.++.+|++|.++++++++       
T Consensus        54 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  133 (300)
T PRK06128         54 QGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKELG  133 (300)
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHHhC
Confidence            4579999999999999999999999999988877543211 1      1113467889999999988877664       


Q ss_pred             CCCEEEEccccCC-----------CcchhhhhhhHHHHHHHHHHHHc--CCCEEEEEecCCcCCCCccccchHHHHHHHH
Q 023205          121 GVTAVISCVGGFG-----------SNSYMYKINGTANINAIRAASEK--GVKRFVYISAADFGVANYLLQGYYEGKRAAE  187 (286)
Q Consensus       121 ~~d~vi~~a~~~~-----------~~~~~~~~~~~~~~~l~~~a~~~--~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E  187 (286)
                      ++|+||||||...           .....+++|+.++.++++++...  .-.+||++||............|+.+|...+
T Consensus       134 ~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~asK~a~~  213 (300)
T PRK06128        134 GLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQSYQPSPTLLDYASTKAAIV  213 (300)
T ss_pred             CCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccccCCCCCchhHHHHHHHHH
Confidence            5799999998631           12346789999999999998753  1248999999532223334567999999999


Q ss_pred             HHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHH
Q 023205          188 TELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVR  261 (286)
Q Consensus       188 ~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~  261 (286)
                      .+++.      ..|+++++++||.+.++......        ...+.+....   ...|     ...+...+|+|.+++.
T Consensus       214 ~~~~~la~el~~~gI~v~~v~PG~i~t~~~~~~~--------~~~~~~~~~~---~~~p-----~~r~~~p~dva~~~~~  277 (300)
T PRK06128        214 AFTKALAKQVAEKGIRVNAVAPGPVWTPLQPSGG--------QPPEKIPDFG---SETP-----MKRPGQPVEMAPLYVL  277 (300)
T ss_pred             HHHHHHHHHhhhcCcEEEEEEECcCcCCCcccCC--------CCHHHHHHHh---cCCC-----CCCCcCHHHHHHHHHH
Confidence            87753      36899999999999887532110        0011111111   1112     2246789999999999


Q ss_pred             HhcCCC--CCCCeeEeccccccc
Q 023205          262 AATDPV--FPPGIVDVHGILRYS  282 (286)
Q Consensus       262 ~l~~~~--~~~~~~~l~~~~~~s  282 (286)
                      ++....  ..+++|++.|+..++
T Consensus       278 l~s~~~~~~~G~~~~v~gg~~~~  300 (300)
T PRK06128        278 LASQESSYVTGEVFGVTGGLLLS  300 (300)
T ss_pred             HhCccccCccCcEEeeCCCEeCc
Confidence            887543  358899999987653

>PRK07890 short chain dehydrogenase; Provisional

Probab=99.86  E-value=2.9e-20  Score=156.34  Aligned_cols=217  Identities=15%  Similarity=0.117  Sum_probs=148.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc---c--ccCCceeEEeccCCCHhHHHHHhc-------CCC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR---D--SWANNVIWHQGNLLSSDSWKEALD-------GVT  123 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~---~--~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d  123 (286)
                      .++|+||||+|+||++++++|+++|++|++++|++.+...   +  ....++.++.+|++|.++++.+++       .+|
T Consensus         5 ~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d   84 (258)
T PRK07890          5 GKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFGRVD   84 (258)
T ss_pred             CCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcCCcc
Confidence            5789999999999999999999999999999998644211   1  113468899999999988876664       579


Q ss_pred             EEEEccccCCC-----------cchhhhhhhHHHHHHHHHHHHc---CCCEEEEEecCCcCCCCccccchHHHHHHHHHH
Q 023205          124 AVISCVGGFGS-----------NSYMYKINGTANINAIRAASEK---GVKRFVYISAADFGVANYLLQGYYEGKRAAETE  189 (286)
Q Consensus       124 ~vi~~a~~~~~-----------~~~~~~~~~~~~~~l~~~a~~~---~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~  189 (286)
                      +|||+||....           ....+++|+.++..+++++...   ..++||++||........+...|+.+|...|.+
T Consensus        85 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sK~a~~~l  164 (258)
T PRK07890         85 ALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMINSMVLRHSQPKYGAYKMAKGALLAA  164 (258)
T ss_pred             EEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEechhhccCCCCcchhHHHHHHHHHH
Confidence            99999986421           1245688999999998888642   225899999964333344567899999999987


Q ss_pred             HHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHh
Q 023205          190 LLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAA  263 (286)
Q Consensus       190 ~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l  263 (286)
                      ++.      ..++++++++||.++++.............+.....+......  ..+     ...+.+++|+|++++.++
T Consensus       165 ~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-----~~~~~~~~dva~a~~~l~  237 (258)
T PRK07890        165 SQSLATELGPQGIRVNSVAPGYIWGDPLKGYFRHQAGKYGVTVEQIYAETAA--NSD-----LKRLPTDDEVASAVLFLA  237 (258)
T ss_pred             HHHHHHHHhhcCcEEEEEeCCccCcHHHHHHhhhcccccCCCHHHHHHHHhh--cCC-----ccccCCHHHHHHHHHHHc
Confidence            753      3589999999999998753211000000000000111111000  111     124678999999999988


Q ss_pred             cCC--CCCCCeeEecccc
Q 023205          264 TDP--VFPPGIVDVHGIL  279 (286)
Q Consensus       264 ~~~--~~~~~~~~l~~~~  279 (286)
                      ...  ...|+++.+.+..
T Consensus       238 ~~~~~~~~G~~i~~~gg~  255 (258)
T PRK07890        238 SDLARAITGQTLDVNCGE  255 (258)
T ss_pred             CHhhhCccCcEEEeCCcc
Confidence            742  3457777777654

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=99.86  E-value=9.9e-20  Score=152.14  Aligned_cols=206  Identities=16%  Similarity=0.102  Sum_probs=145.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCccccc------ccCCceeEEeccCCCHhHHHHHhcC-------C
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRD------SWANNVIWHQGNLLSSDSWKEALDG-------V  122 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~------~~~~~~~~i~~Dl~d~~~~~~~~~~-------~  122 (286)
                      .++++||||+|+||++++++|+++|++|+++.++......+      ....++.++.+|+.|++.+.++++.       +
T Consensus         6 ~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   85 (247)
T PRK12935          6 GKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHFGKV   85 (247)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            57899999999999999999999999998776543221111      1123688999999999988887764       7


Q ss_pred             CEEEEccccCCC----------cchhhhhhhHHHHHHHHHHHH----cCCCEEEEEecCCcCCCCccccchHHHHHHHHH
Q 023205          123 TAVISCVGGFGS----------NSYMYKINGTANINAIRAASE----KGVKRFVYISAADFGVANYLLQGYYEGKRAAET  188 (286)
Q Consensus       123 d~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~~----~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~  188 (286)
                      |+||||||....          ....+++|+.++.++++++..    .+..+||++||........+...|+.+|...|.
T Consensus        86 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  165 (247)
T PRK12935         86 DILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQAGGFGQTNYSAAKAGMLG  165 (247)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhcCCCCCCcchHHHHHHHHH
Confidence            999999987532          124568999999988888764    344689999995322223456789999998887


Q ss_pred             HHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHH
Q 023205          189 ELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRA  262 (286)
Q Consensus       189 ~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~  262 (286)
                      ++..      ..++++++++||.+.++.....   +       .........   .     .....+.+++|++++++.+
T Consensus       166 ~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~---~-------~~~~~~~~~---~-----~~~~~~~~~edva~~~~~~  227 (247)
T PRK12935        166 FTKSLALELAKTNVTVNAICPGFIDTEMVAEV---P-------EEVRQKIVA---K-----IPKKRFGQADEIAKGVVYL  227 (247)
T ss_pred             HHHHHHHHHHHcCcEEEEEEeCCCcChhhhhc---c-------HHHHHHHHH---h-----CCCCCCcCHHHHHHHHHHH
Confidence            6542      3589999999999875432110   0       000111110   0     1123578999999999999


Q ss_pred             hcCCC-CCCCeeEecccc
Q 023205          263 ATDPV-FPPGIVDVHGIL  279 (286)
Q Consensus       263 l~~~~-~~~~~~~l~~~~  279 (286)
                      ++... ..++.|++.+..
T Consensus       228 ~~~~~~~~g~~~~i~~g~  245 (247)
T PRK12935        228 CRDGAYITGQQLNINGGL  245 (247)
T ss_pred             cCcccCccCCEEEeCCCc
Confidence            87543 467999998864

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.86  E-value=6.7e-20  Score=152.44  Aligned_cols=186  Identities=14%  Similarity=0.093  Sum_probs=138.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc-----cccCCceeEEeccCCCHhHHHHHhc-------CCC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------GVT  123 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~-----~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d  123 (286)
                      .++++|||++|++|.+++++|+++|++|++++|+..+...     .....++.++.+|+++++++.++++       ++|
T Consensus         7 ~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   86 (239)
T PRK07666          7 GKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGSID   86 (239)
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCCcc
Confidence            4689999999999999999999999999999998643211     1113468899999999998887775       689


Q ss_pred             EEEEccccCCC----------cchhhhhhhHHHHHHHHHHH----HcCCCEEEEEecCCcCCCCccccchHHHHHHHHHH
Q 023205          124 AVISCVGGFGS----------NSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEGKRAAETE  189 (286)
Q Consensus       124 ~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~----~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~  189 (286)
                      +|||++|....          ....+++|+.++.++.+++.    +.+.+++|++||............|+.+|...+.+
T Consensus        87 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~  166 (239)
T PRK07666         87 ILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQKGAAVTSAYSASKFGVLGL  166 (239)
T ss_pred             EEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhccCCCCCcchHHHHHHHHHH
Confidence            99999986421          12456889999888887775    34567899999954333334556799999988876


Q ss_pred             HHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHh
Q 023205          190 LLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAA  263 (286)
Q Consensus       190 ~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l  263 (286)
                      +..      ..|++++++|||.+..+.....                       ..+.  .....+++.+|+|++++.++
T Consensus       167 ~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~-----------------------~~~~--~~~~~~~~~~~~a~~~~~~l  221 (239)
T PRK07666        167 TESLMQEVRKHNIRVTALTPSTVATDMAVDL-----------------------GLTD--GNPDKVMQPEDLAEFIVAQL  221 (239)
T ss_pred             HHHHHHHhhccCcEEEEEecCcccCcchhhc-----------------------cccc--cCCCCCCCHHHHHHHHHHHH
Confidence            642      4689999999999976532110                       0000  11124588999999999999


Q ss_pred             cCC
Q 023205          264 TDP  266 (286)
Q Consensus       264 ~~~  266 (286)
                      .++
T Consensus       222 ~~~  224 (239)
T PRK07666        222 KLN  224 (239)
T ss_pred             hCC
Confidence            876

>PRK05717 oxidoreductase; Validated

Probab=99.86  E-value=1.2e-19  Score=152.45  Aligned_cols=210  Identities=11%  Similarity=0.041  Sum_probs=146.8

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc--cccCCceeEEeccCCCHhHHHHHhc-------CCCEE
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSWANNVIWHQGNLLSSDSWKEALD-------GVTAV  125 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~--~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d~v  125 (286)
                      .+++|+||||+|+||+++++.|+++|++|++++|+..+...  +....++.++.+|++|.+++.++++       .+|+|
T Consensus         9 ~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~l   88 (255)
T PRK05717          9 NGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQFGRLDAL   88 (255)
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            46799999999999999999999999999999887643211  1123468899999999988765543       47999


Q ss_pred             EEccccCCC------------cchhhhhhhHHHHHHHHHHHH---cCCCEEEEEecCCcCCCCccccchHHHHHHHHHHH
Q 023205          126 ISCVGGFGS------------NSYMYKINGTANINAIRAASE---KGVKRFVYISAADFGVANYLLQGYYEGKRAAETEL  190 (286)
Q Consensus       126 i~~a~~~~~------------~~~~~~~~~~~~~~l~~~a~~---~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~  190 (286)
                      |||||....            ....+++|+.++.++++++.+   ....++|++||............|+.+|...|.++
T Consensus        89 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~~~~~~~~~~Y~~sKaa~~~~~  168 (255)
T PRK05717         89 VCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRARQSEPDTEAYAASKGGLLALT  168 (255)
T ss_pred             EECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhhcCCCCCCcchHHHHHHHHHHH
Confidence            999986532            125678999999999999864   22358999998532222334568999999999877


Q ss_pred             HH-----hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcC
Q 023205          191 LT-----RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATD  265 (286)
Q Consensus       191 ~~-----~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~  265 (286)
                      +.     ..++++++++||.+.++......         ... +.....  ...+.     ..+.+++|+|.++..++..
T Consensus       169 ~~la~~~~~~i~v~~i~Pg~i~t~~~~~~~---------~~~-~~~~~~--~~~~~-----~~~~~~~~va~~~~~l~~~  231 (255)
T PRK05717        169 HALAISLGPEIRVNAVSPGWIDARDPSQRR---------AEP-LSEADH--AQHPA-----GRVGTVEDVAAMVAWLLSR  231 (255)
T ss_pred             HHHHHHhcCCCEEEEEecccCcCCcccccc---------chH-HHHHHh--hcCCC-----CCCcCHHHHHHHHHHHcCc
Confidence            53     23599999999999876432110         000 100000  01111     2357899999999998865


Q ss_pred             CC--CCCCeeEecccccc
Q 023205          266 PV--FPPGIVDVHGILRY  281 (286)
Q Consensus       266 ~~--~~~~~~~l~~~~~~  281 (286)
                      ..  ..|+.+.+.|....
T Consensus       232 ~~~~~~g~~~~~~gg~~~  249 (255)
T PRK05717        232 QAGFVTGQEFVVDGGMTR  249 (255)
T ss_pred             hhcCccCcEEEECCCceE
Confidence            32  35788888776543

>PRK06138 short chain dehydrogenase; Provisional

Probab=99.86  E-value=6.4e-20  Score=153.67  Aligned_cols=211  Identities=14%  Similarity=0.047  Sum_probs=146.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc--c--ccCCceeEEeccCCCHhHHHHHhc-------CCCE
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--D--SWANNVIWHQGNLLSSDSWKEALD-------GVTA  124 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~--~--~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d~  124 (286)
                      .++++||||+|+||++++++|+++|++|+++.|+.+....  .  ....++.++++|++|++++.++++       ++|+
T Consensus         5 ~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~   84 (252)
T PRK06138          5 GRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGRLDV   84 (252)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            5789999999999999999999999999999998654211  0  113468899999999998887765       6899


Q ss_pred             EEEccccCCC----------cchhhhhhhHHHHHHHHHH----HHcCCCEEEEEecCCcCCCCccccchHHHHHHHHHHH
Q 023205          125 VISCVGGFGS----------NSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETEL  190 (286)
Q Consensus       125 vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a----~~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~  190 (286)
                      ||||++....          ....++.|+.++.++.+.+    ++.+.++|+++||............|+.+|...+.++
T Consensus        85 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sK~a~~~~~  164 (252)
T PRK06138         85 LVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLALAGGRGRAAYVASKGAIASLT  164 (252)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCCccHHHHHHHHHHHHH
Confidence            9999996431          1234678888887666554    4566779999999522222334567999999999876


Q ss_pred             HH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhc
Q 023205          191 LT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAAT  264 (286)
Q Consensus       191 ~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~  264 (286)
                      ..      ..+++++++|||.++++........   . .. .+.+.......       .....+++++|+|++++.++.
T Consensus       165 ~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~---~-~~-~~~~~~~~~~~-------~~~~~~~~~~d~a~~~~~l~~  232 (252)
T PRK06138        165 RAMALDHATDGIRVNAVAPGTIDTPYFRRIFAR---H-AD-PEALREALRAR-------HPMNRFGTAEEVAQAALFLAS  232 (252)
T ss_pred             HHHHHHHHhcCeEEEEEEECCccCcchhhhhcc---c-cC-hHHHHHHHHhc-------CCCCCCcCHHHHHHHHHHHcC
Confidence            53      3589999999999987753211000   0 00 00011111000       111237899999999999998


Q ss_pred             CCC--CCCCeeEeccc
Q 023205          265 DPV--FPPGIVDVHGI  278 (286)
Q Consensus       265 ~~~--~~~~~~~l~~~  278 (286)
                      .+.  ..|..+.+.+.
T Consensus       233 ~~~~~~~g~~~~~~~g  248 (252)
T PRK06138        233 DESSFATGTTLVVDGG  248 (252)
T ss_pred             chhcCccCCEEEECCC
Confidence            754  24677877765

>PRK05993 short chain dehydrogenase; Provisional

Probab=99.86  E-value=5.9e-20  Score=156.22  Aligned_cols=154  Identities=18%  Similarity=0.063  Sum_probs=118.9

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhc--------CCCEEE
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD--------GVTAVI  126 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~--------~~d~vi  126 (286)
                      ++++|+||||+|+||++++++|+++|++|++++|+.+... .....+++++.+|++|.++++.+++        .+|+||
T Consensus         3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~-~l~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~li   81 (277)
T PRK05993          3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVA-ALEAEGLEAFQLDYAEPESIAALVAQVLELSGGRLDALF   81 (277)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHCCceEEEccCCCHHHHHHHHHHHHHHcCCCccEEE
Confidence            4578999999999999999999999999999999865421 2222468899999999988776654        469999


Q ss_pred             EccccCCC----------cchhhhhhhHH----HHHHHHHHHHcCCCEEEEEecCCcCCCCccccchHHHHHHHHHHHHH
Q 023205          127 SCVGGFGS----------NSYMYKINGTA----NINAIRAASEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLT  192 (286)
Q Consensus       127 ~~a~~~~~----------~~~~~~~~~~~----~~~l~~~a~~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~~  192 (286)
                      ||||....          ....+++|+.+    +.++++.+++.+..+||++||............|+.+|...|.+...
T Consensus        82 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~  161 (277)
T PRK05993         82 NNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILGLVPMKYRGAYNASKFAIEGLSLT  161 (277)
T ss_pred             ECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhhcCCCCccchHHHHHHHHHHHHHH
Confidence            99986421          12456888888    44566667777778999999953222334567899999999987642


Q ss_pred             ------hCCCcEEEEeeCeeecC
Q 023205          193 ------RYPYGGVILRPGFIYGT  209 (286)
Q Consensus       193 ------~~g~~~~ilRp~~v~g~  209 (286)
                            ..|+++++++||.+-.+
T Consensus       162 l~~el~~~gi~v~~v~Pg~v~T~  184 (277)
T PRK05993        162 LRMELQGSGIHVSLIEPGPIETR  184 (277)
T ss_pred             HHHHhhhhCCEEEEEecCCccCc
Confidence                  57899999999998654

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.86  E-value=3.1e-20  Score=153.07  Aligned_cols=197  Identities=16%  Similarity=0.046  Sum_probs=136.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCccccc-ccCCceeEEeccCCCHhHHHHHhc---CCCEEEEcccc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRD-SWANNVIWHQGNLLSSDSWKEALD---GVTAVISCVGG  131 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~-~~~~~~~~i~~Dl~d~~~~~~~~~---~~d~vi~~a~~  131 (286)
                      +|+++||||+|++|+++++.|+++ ++|++++|+..+.... ....+++++++|+.|++++.++++   ++|+|||++|.
T Consensus         3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag~   81 (227)
T PRK08219          3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAELPGATPFPVDLTDPEAIAAAVEQLGRLDVLVHNAGV   81 (227)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHhccceEEecCCCCHHHHHHHHHhcCCCCEEEECCCc
Confidence            578999999999999999999999 9999999986542111 112368899999999999998887   58999999987


Q ss_pred             CCCc----------chhhhhhhHHHHH----HHHHHHHcCCCEEEEEecCCcCCCCccccchHHHHHHHHHHHHH----h
Q 023205          132 FGSN----------SYMYKINGTANIN----AIRAASEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLT----R  193 (286)
Q Consensus       132 ~~~~----------~~~~~~~~~~~~~----l~~~a~~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~~----~  193 (286)
                      ....          ...++.|..+..+    +++.+++. .+++|++||........+...|+.+|...|.++..    .
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~v~~ss~~~~~~~~~~~~y~~~K~a~~~~~~~~~~~~  160 (227)
T PRK08219         82 ADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAA-HGHVVFINSGAGLRANPGWGSYAASKFALRALADALREEE  160 (227)
T ss_pred             CCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCeEEEEcchHhcCcCCCCchHHHHHHHHHHHHHHHHHHh
Confidence            4311          1235677777444    44444444 46899999853222334456899999998876543    2


Q ss_pred             CC-CcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcCCCCCCCe
Q 023205          194 YP-YGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDPVFPPGI  272 (286)
Q Consensus       194 ~g-~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~~~~~~~  272 (286)
                      .+ ++++.++||.+.++....               +....  ....     ....+++++|+|++++.+++.+.. +.+
T Consensus       161 ~~~i~~~~i~pg~~~~~~~~~---------------~~~~~--~~~~-----~~~~~~~~~dva~~~~~~l~~~~~-~~~  217 (227)
T PRK08219        161 PGNVRVTSVHPGRTDTDMQRG---------------LVAQE--GGEY-----DPERYLRPETVAKAVRFAVDAPPD-AHI  217 (227)
T ss_pred             cCCceEEEEecCCccchHhhh---------------hhhhh--cccc-----CCCCCCCHHHHHHHHHHHHcCCCC-Ccc
Confidence            34 899999998776442210               00000  0001     123579999999999999987653 667


Q ss_pred             eEecc
Q 023205          273 VDVHG  277 (286)
Q Consensus       273 ~~l~~  277 (286)
                      +++.-
T Consensus       218 ~~~~~  222 (227)
T PRK08219        218 TEVVV  222 (227)
T ss_pred             ceEEE
Confidence            77654

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=99.86  E-value=3.4e-20  Score=155.13  Aligned_cols=195  Identities=17%  Similarity=0.103  Sum_probs=137.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc--cccCCceeEEeccCCCHhHHHHHhc-------CCCEEEE
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSWANNVIWHQGNLLSSDSWKEALD-------GVTAVIS  127 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~--~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d~vi~  127 (286)
                      |+|+||||+|++|.++++.|+++|++|++++|++++...  .....++.++.+|+.|.+++.++++       ++|+|||
T Consensus         1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~   80 (248)
T PRK10538          1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLVN   80 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            579999999999999999999999999999998654211  1113468899999999988877664       6899999


Q ss_pred             ccccCC---C--------cchhhhhhhHHHHHHHHHH----HHcCCCEEEEEecCCcCCCCccccchHHHHHHHHHHHHH
Q 023205          128 CVGGFG---S--------NSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLT  192 (286)
Q Consensus       128 ~a~~~~---~--------~~~~~~~~~~~~~~l~~~a----~~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~~  192 (286)
                      ++|...   .        ....+++|+.++.++++.+    ++.+.++||++||............|+.+|...|.+.+.
T Consensus        81 ~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~~~~~~~~~  160 (248)
T PRK10538         81 NAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLN  160 (248)
T ss_pred             CCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccCCCCCCCchhHHHHHHHHHHHHH
Confidence            998631   1        1245678888866655554    456677999999954333334556899999999987653


Q ss_pred             ------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcCC
Q 023205          193 ------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDP  266 (286)
Q Consensus       193 ------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~  266 (286)
                            ..++++++++||.+.|+...... .     ..........        .  + ...++..+|+|++++.++..+
T Consensus       161 l~~~~~~~~i~v~~v~pg~i~~~~~~~~~-~-----~~~~~~~~~~--------~--~-~~~~~~~~dvA~~~~~l~~~~  223 (248)
T PRK10538        161 LRTDLHGTAVRVTDIEPGLVGGTEFSNVR-F-----KGDDGKAEKT--------Y--Q-NTVALTPEDVSEAVWWVATLP  223 (248)
T ss_pred             HHHHhcCCCcEEEEEeCCeecccccchhh-c-----cCcHHHHHhh--------c--c-ccCCCCHHHHHHHHHHHhcCC
Confidence                  35799999999999865432100 0     0000000000        0  0 123579999999999999766


Q ss_pred             CC
Q 023205          267 VF  268 (286)
Q Consensus       267 ~~  268 (286)
                      ..
T Consensus       224 ~~  225 (248)
T PRK10538        224 AH  225 (248)
T ss_pred             Cc
Confidence            53

>PRK12939 short chain dehydrogenase; Provisional

Probab=99.85  E-value=9.4e-20  Score=152.41  Aligned_cols=208  Identities=17%  Similarity=0.109  Sum_probs=148.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc-----cccCCceeEEeccCCCHhHHHHHhc-------CCC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------GVT  123 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~-----~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d  123 (286)
                      .++++||||+|+||+++++.|+++|++|+++.|++++...     +....++.++.+|++|++++.++++       ++|
T Consensus         7 ~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   86 (250)
T PRK12939          7 GKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALGGLD   86 (250)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            5789999999999999999999999999999988653211     1112468999999999998887764       589


Q ss_pred             EEEEccccCCC----------cchhhhhhhHHHHHHHHHHHHc----CCCEEEEEecCCcCCCCccccchHHHHHHHHHH
Q 023205          124 AVISCVGGFGS----------NSYMYKINGTANINAIRAASEK----GVKRFVYISAADFGVANYLLQGYYEGKRAAETE  189 (286)
Q Consensus       124 ~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~~~----~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~  189 (286)
                      +|||++|....          ....++.|+.++.++++++.+.    +..+||++||............|+.+|...|.+
T Consensus        87 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~~~~~~  166 (250)
T PRK12939         87 GLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALWGAPKLGAYVASKGAVIGM  166 (250)
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhccCCCCcchHHHHHHHHHHH
Confidence            99999987531          1234578999998888887543    345999999953323333456799999999987


Q ss_pred             HHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHh
Q 023205          190 LLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAA  263 (286)
Q Consensus       190 ~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l  263 (286)
                      ++.      ..++++++++||.+..+.....   +.   ......+.    ..       .....+++++|+|++++.++
T Consensus       167 ~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~---~~---~~~~~~~~----~~-------~~~~~~~~~~dva~~~~~l~  229 (250)
T PRK12939        167 TRSLARELGGRGITVNAIAPGLTATEATAYV---PA---DERHAYYL----KG-------RALERLQVPDDVAGAVLFLL  229 (250)
T ss_pred             HHHHHHHHhhhCEEEEEEEECCCCCcccccc---CC---hHHHHHHH----hc-------CCCCCCCCHHHHHHHHHHHh
Confidence            753      3689999999998865542110   00   01111111    00       12234689999999999999


Q ss_pred             cCCC--CCCCeeEeccccc
Q 023205          264 TDPV--FPPGIVDVHGILR  280 (286)
Q Consensus       264 ~~~~--~~~~~~~l~~~~~  280 (286)
                      ..+.  ..|+.+++.|...
T Consensus       230 ~~~~~~~~G~~i~~~gg~~  248 (250)
T PRK12939        230 SDAARFVTGQLLPVNGGFV  248 (250)
T ss_pred             CccccCccCcEEEECCCcc
Confidence            7643  4688999988653

>PRK06123 short chain dehydrogenase; Provisional

Probab=99.85  E-value=9.7e-20  Score=152.24  Aligned_cols=205  Identities=17%  Similarity=0.192  Sum_probs=141.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc------cccCCceeEEeccCCCHhHHHHHhc-------CC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD-------GV  122 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~------~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~  122 (286)
                      +++++||||+|+||++++++|+++|++|++..++......      .....++.++.+|++|.+++.++++       .+
T Consensus         2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   81 (248)
T PRK06123          2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGRL   81 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence            4689999999999999999999999998877654322111      1112467889999999998887775       57


Q ss_pred             CEEEEccccCCCc-----------chhhhhhhHHHHHHHHHHHHcC-------CCEEEEEecCC--cCCCCccccchHHH
Q 023205          123 TAVISCVGGFGSN-----------SYMYKINGTANINAIRAASEKG-------VKRFVYISAAD--FGVANYLLQGYYEG  182 (286)
Q Consensus       123 d~vi~~a~~~~~~-----------~~~~~~~~~~~~~l~~~a~~~~-------v~~~v~~Ss~~--~~~~~~~~~~y~~s  182 (286)
                      |+||||++.....           ...+++|+.++.++++++.+..       -.+||++||..  ++.+ .....|+.+
T Consensus        82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~-~~~~~Y~~s  160 (248)
T PRK06123         82 DALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSP-GEYIDYAAS  160 (248)
T ss_pred             CEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCCC-CCccchHHH
Confidence            9999999865311           1457899999988888775431       13699999942  2222 112469999


Q ss_pred             HHHHHHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHH
Q 023205          183 KRAAETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVA  256 (286)
Q Consensus       183 K~~~E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva  256 (286)
                      |...|.+++.      ..|++++++|||.++++......         ....+ .....  ..|.     ..+.+++|++
T Consensus       161 Kaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~~~~---------~~~~~-~~~~~--~~p~-----~~~~~~~d~a  223 (248)
T PRK06123        161 KGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHASGG---------EPGRV-DRVKA--GIPM-----GRGGTAEEVA  223 (248)
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEecCcccCchhhccC---------CHHHH-HHHHh--cCCC-----CCCcCHHHHH
Confidence            9999987653      35899999999999988532110         00111 11111  1111     1134789999


Q ss_pred             HHHHHHhcCCC--CCCCeeEeccc
Q 023205          257 KVAVRAATDPV--FPPGIVDVHGI  278 (286)
Q Consensus       257 ~~~~~~l~~~~--~~~~~~~l~~~  278 (286)
                      ++++.++....  ..++.|++.|+
T Consensus       224 ~~~~~l~~~~~~~~~g~~~~~~gg  247 (248)
T PRK06123        224 RAILWLLSDEASYTTGTFIDVSGG  247 (248)
T ss_pred             HHHHHHhCccccCccCCEEeecCC
Confidence            99999887542  45789998875

>PRK05876 short chain dehydrogenase; Provisional

Probab=99.85  E-value=5.3e-20  Score=156.24  Aligned_cols=209  Identities=16%  Similarity=0.079  Sum_probs=142.1

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc---c--ccCCceeEEeccCCCHhHHHHHhc-------CC
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR---D--SWANNVIWHQGNLLSSDSWKEALD-------GV  122 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~---~--~~~~~~~~i~~Dl~d~~~~~~~~~-------~~  122 (286)
                      ++++++||||+|+||+++++.|+++|++|++.+|+.++...   +  ....++.++.+|++|.+++.++++       .+
T Consensus         5 ~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   84 (275)
T PRK05876          5 PGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLGHV   84 (275)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence            35789999999999999999999999999999988644211   1  112357889999999998887765       47


Q ss_pred             CEEEEccccCCC----------cchhhhhhhHHHHHHHHHHH----HcC-CCEEEEEecCCcCCCCccccchHHHHHHHH
Q 023205          123 TAVISCVGGFGS----------NSYMYKINGTANINAIRAAS----EKG-VKRFVYISAADFGVANYLLQGYYEGKRAAE  187 (286)
Q Consensus       123 d~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~----~~~-v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E  187 (286)
                      |+||||||....          ....+++|+.++.++++++.    +.+ ..+||++||........+...|+.+|...+
T Consensus        85 d~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~  164 (275)
T PRK05876         85 DVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVPNAGLGAYGVAKYGVV  164 (275)
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhccCCCCCchHHHHHHHHH
Confidence            999999986421          12456899999998888874    333 468999999533233445678999999754


Q ss_pred             HHH----HH--hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCC--CccCCCccHHHHHHHH
Q 023205          188 TEL----LT--RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVG--PLFTPPVNVTVVAKVA  259 (286)
Q Consensus       188 ~~~----~~--~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--~~~~~~i~v~Dva~~~  259 (286)
                      .+.    .+  ..|+++++++||.+.++......           ................+  +...++++++|+|+++
T Consensus       165 ~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  233 (275)
T PRK05876        165 GLAETLAREVTADGIGVSVLCPMVVETNLVANSE-----------RIRGAACAQSSTTGSPGPLPLQDDNLGVDDIAQLT  233 (275)
T ss_pred             HHHHHHHHHhhhcCcEEEEEEeCccccccccchh-----------hhcCccccccccccccccccccccCCCHHHHHHHH
Confidence            433    33  46899999999998766432110           00000000000111111  2245689999999999


Q ss_pred             HHHhcCCCCCCCeeEeccc
Q 023205          260 VRAATDPVFPPGIVDVHGI  278 (286)
Q Consensus       260 ~~~l~~~~~~~~~~~l~~~  278 (286)
                      +.++..+    +.|.+.++
T Consensus       234 ~~ai~~~----~~~~~~~~  248 (275)
T PRK05876        234 ADAILAN----RLYVLPHA  248 (275)
T ss_pred             HHHHHcC----CeEEecCh
Confidence            9999764    45555544

>PLN02253 xanthoxin dehydrogenase

Probab=99.85  E-value=1.8e-19  Score=153.42  Aligned_cols=219  Identities=15%  Similarity=0.119  Sum_probs=148.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc--c-c-cCCceeEEeccCCCHhHHHHHhc-------CCCE
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--D-S-WANNVIWHQGNLLSSDSWKEALD-------GVTA  124 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~--~-~-~~~~~~~i~~Dl~d~~~~~~~~~-------~~d~  124 (286)
                      +++++||||+|+||++++++|+++|++|++++|+.+....  . . ...++.++++|++|.++++++++       ++|+
T Consensus        18 ~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~id~   97 (280)
T PLN02253         18 GKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFGTLDI   97 (280)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHhCCCCE
Confidence            5789999999999999999999999999999987543211  1 1 12468899999999998888775       5899


Q ss_pred             EEEccccCCC------------cchhhhhhhHHHHHHHHHHHHc----CCCEEEEEecCCcCCCCccccchHHHHHHHHH
Q 023205          125 VISCVGGFGS------------NSYMYKINGTANINAIRAASEK----GVKRFVYISAADFGVANYLLQGYYEGKRAAET  188 (286)
Q Consensus       125 vi~~a~~~~~------------~~~~~~~~~~~~~~l~~~a~~~----~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~  188 (286)
                      ||||||....            ....+++|+.++.++++++...    +..++|++||............|+.+|...|.
T Consensus        98 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a~~~  177 (280)
T PLN02253         98 MVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGGLGPHAYTGSKHAVLG  177 (280)
T ss_pred             EEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhcccCCCCcccHHHHHHHHH
Confidence            9999986421            1346789999999888877542    33579999884321222234579999999998


Q ss_pred             HHHH------hCCCcEEEEeeCeeecCCCCCccccCcc-ccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHH
Q 023205          189 ELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLG-VIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVR  261 (286)
Q Consensus       189 ~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~  261 (286)
                      +.+.      ..|+++++++||.+..+......  +.. ........+......  ..+.    ....++++|+|++++.
T Consensus       178 ~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~--~~~l----~~~~~~~~dva~~~~~  249 (280)
T PLN02253        178 LTRSVAAELGKHGIRVNCVSPYAVPTALALAHL--PEDERTEDALAGFRAFAGK--NANL----KGVELTVDDVANAVLF  249 (280)
T ss_pred             HHHHHHHHhhhcCeEEEEEeeCccccccccccc--ccccchhhhhhhhHHHhhc--CCCC----cCCCCCHHHHHHHHHh
Confidence            7753      35899999999999766421110  100 000011111111110  0111    1224789999999999


Q ss_pred             HhcCCC--CCCCeeEeccccccc
Q 023205          262 AATDPV--FPPGIVDVHGILRYS  282 (286)
Q Consensus       262 ~l~~~~--~~~~~~~l~~~~~~s  282 (286)
                      ++..+.  ..|..+++.|+...+
T Consensus       250 l~s~~~~~i~G~~i~vdgG~~~~  272 (280)
T PLN02253        250 LASDEARYISGLNLMIDGGFTCT  272 (280)
T ss_pred             hcCcccccccCcEEEECCchhhc
Confidence            987543  357889998875543

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=99.85  E-value=5.9e-20  Score=153.67  Aligned_cols=212  Identities=18%  Similarity=0.150  Sum_probs=146.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc-----cccCCceeEEeccCCCHhHHHHHhc-------CCC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------GVT  123 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~-----~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d  123 (286)
                      ++++|||||+|+||++++++|+++|++|++++|+.+....     .....++.++.+|++|.++++++++       ++|
T Consensus         3 ~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~d   82 (250)
T TIGR03206         3 DKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGPVD   82 (250)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            5789999999999999999999999999999998654211     1113468899999999998887765       589


Q ss_pred             EEEEccccCCC----------cchhhhhhhHHHHHHHHHHH----HcCCCEEEEEecCCcCCCCccccchHHHHHHHHHH
Q 023205          124 AVISCVGGFGS----------NSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEGKRAAETE  189 (286)
Q Consensus       124 ~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~----~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~  189 (286)
                      +|||+++....          ....+++|+.++.++++++.    +.+.++||++||............|+.+|...+.+
T Consensus        83 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~~~~~~~~~Y~~sK~a~~~~  162 (250)
T TIGR03206        83 VLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARVGSSGEAVYAACKGGLVAF  162 (250)
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhccCCCCCchHHHHHHHHHHH
Confidence            99999985321          12357899999998877764    45667999999953222233456799999888876


Q ss_pred             HHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHh
Q 023205          190 LLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAA  263 (286)
Q Consensus       190 ~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l  263 (286)
                      ...      ..+++++++|||.++++........    .............   .++.     ..+...+|+|+++..++
T Consensus       163 ~~~la~~~~~~~i~v~~v~pg~~~~~~~~~~~~~----~~~~~~~~~~~~~---~~~~-----~~~~~~~dva~~~~~l~  230 (250)
T TIGR03206       163 SKTMAREHARHGITVNVVCPGPTDTALLDDICGG----AENPEKLREAFTR---AIPL-----GRLGQPDDLPGAILFFS  230 (250)
T ss_pred             HHHHHHHHhHhCcEEEEEecCcccchhHHhhhhc----cCChHHHHHHHHh---cCCc-----cCCcCHHHHHHHHHHHc
Confidence            643      3589999999999987743211000    0000011111111   1111     12467899999999998


Q ss_pred             cCCC--CCCCeeEecccc
Q 023205          264 TDPV--FPPGIVDVHGIL  279 (286)
Q Consensus       264 ~~~~--~~~~~~~l~~~~  279 (286)
                      ..+.  ..|+++.+.+..
T Consensus       231 ~~~~~~~~g~~~~~~~g~  248 (250)
T TIGR03206       231 SDDASFITGQVLSVSGGL  248 (250)
T ss_pred             CcccCCCcCcEEEeCCCc
Confidence            7543  357899988753

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK08628 short chain dehydrogenase; Provisional

Probab=99.85  E-value=4.8e-20  Score=155.09  Aligned_cols=215  Identities=13%  Similarity=0.059  Sum_probs=148.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCccc--c--cccCCceeEEeccCCCHhHHHHHhc-------CCCE
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSL--R--DSWANNVIWHQGNLLSSDSWKEALD-------GVTA  124 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~--~--~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d~  124 (286)
                      .++++||||+|+||++++++|+++|++|++++|+.++..  .  .....++.++.+|+++++++.++++       ++|+
T Consensus         7 ~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   86 (258)
T PRK08628          7 DKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFGRIDG   86 (258)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCCCE
Confidence            578999999999999999999999999999999875421  0  1123468899999999998887775       5799


Q ss_pred             EEEccccCCC---------cchhhhhhhHHHHHHHHHHHH---cCCCEEEEEecCCcCCCCccccchHHHHHHHHHHHHH
Q 023205          125 VISCVGGFGS---------NSYMYKINGTANINAIRAASE---KGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLT  192 (286)
Q Consensus       125 vi~~a~~~~~---------~~~~~~~~~~~~~~l~~~a~~---~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~~  192 (286)
                      ||||+|....         ....++.|+.+..++.+.+.+   .+..+||++||............|+.+|...|.+++.
T Consensus        87 vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~  166 (258)
T PRK08628         87 LVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKASRGAIVNISSKTALTGQGGTSGYAAAKGAQLALTRE  166 (258)
T ss_pred             EEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhccCcEEEEECCHHhccCCCCCchhHHHHHHHHHHHHH
Confidence            9999985421         123467888888888777653   2336899999953223334567899999999987763


Q ss_pred             ------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcCC
Q 023205          193 ------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDP  266 (286)
Q Consensus       193 ------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~  266 (286)
                            ..+++++.++||.++++...... .   .............   ..++.    ...+++.+|+|++++.++..+
T Consensus       167 l~~e~~~~~i~v~~v~pg~v~t~~~~~~~-~---~~~~~~~~~~~~~---~~~~~----~~~~~~~~dva~~~~~l~~~~  235 (258)
T PRK08628        167 WAVALAKDGVRVNAVIPAEVMTPLYENWI-A---TFDDPEAKLAAIT---AKIPL----GHRMTTAEEIADTAVFLLSER  235 (258)
T ss_pred             HHHHHhhcCeEEEEEecCccCCHHHHHHh-h---hccCHHHHHHHHH---hcCCc----cccCCCHHHHHHHHHHHhChh
Confidence                  35899999999999887421100 0   0000001111111   11121    113678999999999999764


Q ss_pred             --CCCCCeeEecccccc
Q 023205          267 --VFPPGIVDVHGILRY  281 (286)
Q Consensus       267 --~~~~~~~~l~~~~~~  281 (286)
                        ...++.+.+.|....
T Consensus       236 ~~~~~g~~~~~~gg~~~  252 (258)
T PRK08628        236 SSHTTGQWLFVDGGYVH  252 (258)
T ss_pred             hccccCceEEecCCccc
Confidence              345778888776543

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=99.85  E-value=1.2e-19  Score=152.78  Aligned_cols=215  Identities=12%  Similarity=0.035  Sum_probs=141.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCccc--cc--ccCCceeEEeccCCCHhHHHHHhc-------CCCE
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSL--RD--SWANNVIWHQGNLLSSDSWKEALD-------GVTA  124 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~--~~--~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d~  124 (286)
                      .++++||||+|+||++++++|+++|++|++++|+.....  .+  ....++.++.+|++|.+++.++++       ++|+
T Consensus         8 ~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   87 (260)
T PRK12823          8 GKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSELVHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAFGRIDV   87 (260)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcCCCeE
Confidence            578999999999999999999999999999999743211  01  112467789999999888776664       5799


Q ss_pred             EEEccccCC--C---------cchhhhhhhHHHHHHHH----HHHHcCCCEEEEEecCCcCCCCccccchHHHHHHHHHH
Q 023205          125 VISCVGGFG--S---------NSYMYKINGTANINAIR----AASEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETE  189 (286)
Q Consensus       125 vi~~a~~~~--~---------~~~~~~~~~~~~~~l~~----~a~~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~  189 (286)
                      +|||||...  .         ....+++|+.++..+++    .+++.+..+||++||....  ......|+.+|...+.+
T Consensus        88 lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~--~~~~~~Y~~sK~a~~~~  165 (260)
T PRK12823         88 LINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIATR--GINRVPYSAAKGGVNAL  165 (260)
T ss_pred             EEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCcccc--CCCCCccHHHHHHHHHH
Confidence            999998431  1         12345677777765544    4445566789999995321  12345799999999987


Q ss_pred             HHH------hCCCcEEEEeeCeeecCCCCC--ccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHH
Q 023205          190 LLT------RYPYGGVILRPGFIYGTRTVG--GMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVR  261 (286)
Q Consensus       190 ~~~------~~g~~~~ilRp~~v~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~  261 (286)
                      .+.      ..|+++++++||.++++....  ....+........+.+......  ..|.     ..+.+++|+|++++.
T Consensus       166 ~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-----~~~~~~~dva~~~~~  238 (260)
T PRK12823        166 TASLAFEYAEHGIRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAWYQQIVDQTLD--SSLM-----KRYGTIDEQVAAILF  238 (260)
T ss_pred             HHHHHHHhcccCcEEEEEecCccCCcchhhHHhhccccccccccHHHHHHHHhc--cCCc-----ccCCCHHHHHHHHHH
Confidence            653      358999999999999873210  0000000000111111111111  1111     234578999999999


Q ss_pred             HhcCCC--CCCCeeEecccc
Q 023205          262 AATDPV--FPPGIVDVHGIL  279 (286)
Q Consensus       262 ~l~~~~--~~~~~~~l~~~~  279 (286)
                      ++....  ..++++++.+++
T Consensus       239 l~s~~~~~~~g~~~~v~gg~  258 (260)
T PRK12823        239 LASDEASYITGTVLPVGGGD  258 (260)
T ss_pred             HcCcccccccCcEEeecCCC
Confidence            886543  357899998764

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.85  E-value=1.1e-19  Score=152.43  Aligned_cols=207  Identities=17%  Similarity=0.145  Sum_probs=147.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc---cccCCceeEEeccCCCHhHHHHHhcC--------CCE
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR---DSWANNVIWHQGNLLSSDSWKEALDG--------VTA  124 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~---~~~~~~~~~i~~Dl~d~~~~~~~~~~--------~d~  124 (286)
                      .++++||||+|+||+++++.|+++|++|+++.++......   .....++.++++|+.|++++.+++++        +|+
T Consensus         5 ~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~id~   84 (253)
T PRK08642          5 EQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELGDRAIALQADVTDREQVQAMFATATEHFGKPITT   84 (253)
T ss_pred             CCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCeE
Confidence            4789999999999999999999999999887665332111   11124688999999999988877753        899


Q ss_pred             EEEccccCC-------C---------cchhhhhhhHHHHHHHHHHHH----cCCCEEEEEecCCcCCCCccccchHHHHH
Q 023205          125 VISCVGGFG-------S---------NSYMYKINGTANINAIRAASE----KGVKRFVYISAADFGVANYLLQGYYEGKR  184 (286)
Q Consensus       125 vi~~a~~~~-------~---------~~~~~~~~~~~~~~l~~~a~~----~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~  184 (286)
                      +||+|+...       .         ....+++|+.+..++++++..    .+..++|++||........+...|+.+|.
T Consensus        85 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~  164 (253)
T PRK08642         85 VVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLFQNPVVPYHDYTTAKA  164 (253)
T ss_pred             EEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCCCccchHHHHH
Confidence            999997521       0         123578899999999888753    44568999999644444456678999999


Q ss_pred             HHHHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHH
Q 023205          185 AAETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKV  258 (286)
Q Consensus       185 ~~E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~  258 (286)
                      ..|.+++.      ..|++++.++||.+..+.....  .     .   +.......  ...|.     ..+.+.+|+|++
T Consensus       165 a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~~~~~--~-----~---~~~~~~~~--~~~~~-----~~~~~~~~va~~  227 (253)
T PRK08642        165 ALLGLTRNLAAELGPYGITVNMVSGGLLRTTDASAA--T-----P---DEVFDLIA--ATTPL-----RKVTTPQEFADA  227 (253)
T ss_pred             HHHHHHHHHHHHhCccCeEEEEEeecccCCchhhcc--C-----C---HHHHHHHH--hcCCc-----CCCCCHHHHHHH
Confidence            99998764      4689999999999865422111  0     0   11111111  11222     347899999999


Q ss_pred             HHHHhcCC--CCCCCeeEecccc
Q 023205          259 AVRAATDP--VFPPGIVDVHGIL  279 (286)
Q Consensus       259 ~~~~l~~~--~~~~~~~~l~~~~  279 (286)
                      +..++..+  ...|+.+.+.|..
T Consensus       228 ~~~l~~~~~~~~~G~~~~vdgg~  250 (253)
T PRK08642        228 VLFFASPWARAVTGQNLVVDGGL  250 (253)
T ss_pred             HHHHcCchhcCccCCEEEeCCCe
Confidence            99999753  3567888888764

>PRK06523 short chain dehydrogenase; Provisional

Probab=99.85  E-value=2.6e-19  Score=150.76  Aligned_cols=218  Identities=18%  Similarity=0.167  Sum_probs=147.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHh-------cCCCEEEEc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEAL-------DGVTAVISC  128 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~-------~~~d~vi~~  128 (286)
                      .++|+||||+|+||++++++|+++|++|+++.|+..+.    ...++.++++|+.|.+.+++++       ..+|+|||+
T Consensus         9 ~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~   84 (260)
T PRK06523          9 GKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD----LPEGVEFVAADLTTAEGCAAVARAVLERLGGVDILVHV   84 (260)
T ss_pred             CCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh----cCCceeEEecCCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            57899999999999999999999999999999986542    1346889999999998777554       357999999


Q ss_pred             cccCC------------CcchhhhhhhHHHHHHHHHH----HHcCCCEEEEEecCCcCCC-CccccchHHHHHHHHHHHH
Q 023205          129 VGGFG------------SNSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVA-NYLLQGYYEGKRAAETELL  191 (286)
Q Consensus       129 a~~~~------------~~~~~~~~~~~~~~~l~~~a----~~~~v~~~v~~Ss~~~~~~-~~~~~~y~~sK~~~E~~~~  191 (286)
                      ||...            .....+++|+.++.++.+++    ++.+..+||++||...... ......|+.+|...|.+++
T Consensus        85 ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~~Y~~sK~a~~~l~~  164 (260)
T PRK06523         85 LGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRLPLPESTTAYAAAKAALSTYSK  164 (260)
T ss_pred             CcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEecccccCCCCCCcchhHHHHHHHHHHHH
Confidence            98531            12345678988887776554    4455568999999532222 2256789999999998765


Q ss_pred             H------hCCCcEEEEeeCeeecCCCCCccc-cCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhc
Q 023205          192 T------RYPYGGVILRPGFIYGTRTVGGMK-LPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAAT  264 (286)
Q Consensus       192 ~------~~g~~~~ilRp~~v~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~  264 (286)
                      .      ..|+++++++||.+.++....... ..........+...........+|.     ..+...+|+|+++..++.
T Consensus       165 ~~a~~~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-----~~~~~~~~va~~~~~l~s  239 (260)
T PRK06523        165 SLSKEVAPKGVRVNTVSPGWIETEAAVALAERLAEAAGTDYEGAKQIIMDSLGGIPL-----GRPAEPEEVAELIAFLAS  239 (260)
T ss_pred             HHHHHHhhcCcEEEEEecCcccCccHHHHHHHHHhhcCCCHHHHHHHHHHHhccCcc-----CCCCCHHHHHHHHHHHhC
Confidence            3      368999999999998764321100 0000000000000000000111222     235678999999999997


Q ss_pred             CC--CCCCCeeEeccccccc
Q 023205          265 DP--VFPPGIVDVHGILRYS  282 (286)
Q Consensus       265 ~~--~~~~~~~~l~~~~~~s  282 (286)
                      .+  ...|+.+.+.|+...+
T Consensus       240 ~~~~~~~G~~~~vdgg~~~~  259 (260)
T PRK06523        240 DRAASITGTEYVIDGGTVPT  259 (260)
T ss_pred             cccccccCceEEecCCccCC
Confidence            53  3557899998876544

>PRK06398 aldose dehydrogenase; Validated

Probab=99.85  E-value=3.4e-19  Score=149.93  Aligned_cols=211  Identities=17%  Similarity=0.123  Sum_probs=146.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhc-------CCCEEEEc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD-------GVTAVISC  128 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d~vi~~  128 (286)
                      .+++|||||+|+||++++++|+++|++|++++|+....      .++.++.+|++|+++++++++       .+|+||||
T Consensus         6 gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~------~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~li~~   79 (258)
T PRK06398          6 DKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSY------NDVDYFKVDVSNKEQVIKGIDYVISKYGRIDILVNN   79 (258)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCcccc------CceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            57999999999999999999999999999999986542      368899999999988877764       58999999


Q ss_pred             cccCCC----------cchhhhhhhHHHHHHHHHHHH----cCCCEEEEEecCCcCCCCccccchHHHHHHHHHHHHH--
Q 023205          129 VGGFGS----------NSYMYKINGTANINAIRAASE----KGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLT--  192 (286)
Q Consensus       129 a~~~~~----------~~~~~~~~~~~~~~l~~~a~~----~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~~--  192 (286)
                      ||....          ....+++|+.++..+++++.+    .+..+||++||............|+.+|...+.+.+.  
T Consensus        80 Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaal~~~~~~la  159 (258)
T PRK06398         80 AGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFAVTRNAAAYVTSKHAVLGLTRSIA  159 (258)
T ss_pred             CCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhccCCCCCchhhhhHHHHHHHHHHHH
Confidence            986421          124568999999888877643    4556999999954333344567899999999987753  


Q ss_pred             ---hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhccc-CCCCCCCCCccCCCccHHHHHHHHHHHhcCC--
Q 023205          193 ---RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKP-LSQLPLVGPLFTPPVNVTVVAKVAVRAATDP--  266 (286)
Q Consensus       193 ---~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~--  266 (286)
                         ...+++++++||.+-.+..........   +...+........ ....|     ...+..++|+|++++.++...  
T Consensus       160 ~e~~~~i~vn~i~PG~v~T~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~-----~~~~~~p~eva~~~~~l~s~~~~  231 (258)
T PRK06398        160 VDYAPTIRCVAVCPGSIRTPLLEWAAELEV---GKDPEHVERKIREWGEMHP-----MKRVGKPEEVAYVVAFLASDLAS  231 (258)
T ss_pred             HHhCCCCEEEEEecCCccchHHhhhhhccc---cCChhhhHHHHHhhhhcCC-----cCCCcCHHHHHHHHHHHcCcccC
Confidence               224999999999886543211000000   0000000000000 00111     123568999999999988753  


Q ss_pred             CCCCCeeEeccccc
Q 023205          267 VFPPGIVDVHGILR  280 (286)
Q Consensus       267 ~~~~~~~~l~~~~~  280 (286)
                      ...|+++.+.|+..
T Consensus       232 ~~~G~~i~~dgg~~  245 (258)
T PRK06398        232 FITGECVTVDGGLR  245 (258)
T ss_pred             CCCCcEEEECCccc
Confidence            34678888887654

>PRK07454 short chain dehydrogenase; Provisional

Probab=99.85  E-value=1.1e-19  Score=151.24  Aligned_cols=189  Identities=13%  Similarity=0.017  Sum_probs=137.0

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc-----cccCCceeEEeccCCCHhHHHHHhc-------CC
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------GV  122 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~-----~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~  122 (286)
                      .+++++||||+|++|..++++|+++|++|++++|++++...     .....++.++.+|++|.+++..+++       .+
T Consensus         5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   84 (241)
T PRK07454          5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGCP   84 (241)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            36789999999999999999999999999999998654211     1112468899999999998877765       48


Q ss_pred             CEEEEccccCCC----------cchhhhhhhHHHHHHHHHH----HHcCCCEEEEEecCCcCCCCccccchHHHHHHHHH
Q 023205          123 TAVISCVGGFGS----------NSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKRAAET  188 (286)
Q Consensus       123 d~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a----~~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~  188 (286)
                      |+|||++|....          ....+++|+.++.++++.+    ++.+..+||++||............|+.+|...+.
T Consensus        85 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~~~~~  164 (241)
T PRK07454         85 DVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAARNAFPQWGAYCVSKAALAA  164 (241)
T ss_pred             CEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCcCCCCccHHHHHHHHHHH
Confidence            999999986421          1244678888888777665    34455789999995322233445679999999998


Q ss_pred             HHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHH
Q 023205          189 ELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRA  262 (286)
Q Consensus       189 ~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~  262 (286)
                      +.+.      ..|++++++|||.+-.+......         .             ...  .....+++.+|+|++++.+
T Consensus       165 ~~~~~a~e~~~~gi~v~~i~pg~i~t~~~~~~~---------~-------------~~~--~~~~~~~~~~~va~~~~~l  220 (241)
T PRK07454        165 FTKCLAEEERSHGIRVCTITLGAVNTPLWDTET---------V-------------QAD--FDRSAMLSPEQVAQTILHL  220 (241)
T ss_pred             HHHHHHHHhhhhCCEEEEEecCcccCCcccccc---------c-------------ccc--cccccCCCHHHHHHHHHHH
Confidence            6642      45899999999998765321100         0             000  0012358999999999999


Q ss_pred             hcCCC
Q 023205          263 ATDPV  267 (286)
Q Consensus       263 l~~~~  267 (286)
                      +..+.
T Consensus       221 ~~~~~  225 (241)
T PRK07454        221 AQLPP  225 (241)
T ss_pred             HcCCc
Confidence            98774

>PRK07024 short chain dehydrogenase; Provisional

Probab=99.85  E-value=9.3e-20  Score=153.29  Aligned_cols=184  Identities=18%  Similarity=0.103  Sum_probs=134.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc--c-cc-CCceeEEeccCCCHhHHHHHhcC-------CCE
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--D-SW-ANNVIWHQGNLLSSDSWKEALDG-------VTA  124 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~--~-~~-~~~~~~i~~Dl~d~~~~~~~~~~-------~d~  124 (286)
                      +++|+||||+|+||.+++++|+++|++|++++|+.++...  + .. ..++.++.+|++|++++.++++.       +|+
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~   81 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHGLPDV   81 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence            5789999999999999999999999999999998654211  1 11 11688999999999988877653       799


Q ss_pred             EEEccccCCC-----------cchhhhhhhHHHHHHHH----HHHHcCCCEEEEEecCCcCCCCccccchHHHHHHHHHH
Q 023205          125 VISCVGGFGS-----------NSYMYKINGTANINAIR----AASEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETE  189 (286)
Q Consensus       125 vi~~a~~~~~-----------~~~~~~~~~~~~~~l~~----~a~~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~  189 (286)
                      +|||+|....           ....+++|+.++.++++    .+++.+..+||++||...-........|+.+|...+.+
T Consensus        82 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asK~a~~~~  161 (257)
T PRK07024         82 VIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVGIASVAGVRGLPGAGAYSASKAAAIKY  161 (257)
T ss_pred             EEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCCCCcchHHHHHHHHHH
Confidence            9999986431           12356789999887766    44556667999999953222223456799999999987


Q ss_pred             HHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHh
Q 023205          190 LLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAA  263 (286)
Q Consensus       190 ~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l  263 (286)
                      ...      ..|+++++++||.+.++.....                       ..+     .-.+++.+|+|+.++.++
T Consensus       162 ~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~-----------------------~~~-----~~~~~~~~~~a~~~~~~l  213 (257)
T PRK07024        162 LESLRVELRPAGVRVVTIAPGYIRTPMTAHN-----------------------PYP-----MPFLMDADRFAARAARAI  213 (257)
T ss_pred             HHHHHHHhhccCcEEEEEecCCCcCchhhcC-----------------------CCC-----CCCccCHHHHHHHHHHHH
Confidence            642      4689999999999986632100                       000     001368999999999999


Q ss_pred             cCCC
Q 023205          264 TDPV  267 (286)
Q Consensus       264 ~~~~  267 (286)
                      .+.+
T Consensus       214 ~~~~  217 (257)
T PRK07024        214 ARGR  217 (257)
T ss_pred             hCCC
Confidence            7654

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=99.84  E-value=2.8e-19  Score=149.10  Aligned_cols=208  Identities=19%  Similarity=0.194  Sum_probs=145.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCccccc------ccCCceeEEeccCCCHhHHHHHhc-------CC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRD------SWANNVIWHQGNLLSSDSWKEALD-------GV  122 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~------~~~~~~~~i~~Dl~d~~~~~~~~~-------~~  122 (286)
                      +++++|||++|++|+++++.|+++|++|+++.|+..+....      ....++.++.+|+.|.+.+.++++       .+
T Consensus         2 ~k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~i   81 (245)
T PRK12824          2 KKIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGPV   81 (245)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            46899999999999999999999999999999985421111      112468899999999998877764       47


Q ss_pred             CEEEEccccCCC----------cchhhhhhhHHHHHHHHH----HHHcCCCEEEEEecCCcCCCCccccchHHHHHHHHH
Q 023205          123 TAVISCVGGFGS----------NSYMYKINGTANINAIRA----ASEKGVKRFVYISAADFGVANYLLQGYYEGKRAAET  188 (286)
Q Consensus       123 d~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~----a~~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~  188 (286)
                      |+|||++|....          ....+++|+.+..++.+.    +++.+..+||++||............|..+|...+.
T Consensus        82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~Y~~sK~a~~~  161 (245)
T PRK12824         82 DILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINISSVNGLKGQFGQTNYSAAKAGMIG  161 (245)
T ss_pred             CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEECChhhccCCCCChHHHHHHHHHHH
Confidence            999999986421          124567888888877554    455566799999995322233345679999998887


Q ss_pred             HHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHH
Q 023205          189 ELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRA  262 (286)
Q Consensus       189 ~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~  262 (286)
                      +++.      ..++++++++||.+.++......       .   ........   ..+     ...+...+|+++++..+
T Consensus       162 ~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~-------~---~~~~~~~~---~~~-----~~~~~~~~~va~~~~~l  223 (245)
T PRK12824        162 FTKALASEGARYGITVNCIAPGYIATPMVEQMG-------P---EVLQSIVN---QIP-----MKRLGTPEEIAAAVAFL  223 (245)
T ss_pred             HHHHHHHHHHHhCeEEEEEEEcccCCcchhhcC-------H---HHHHHHHh---cCC-----CCCCCCHHHHHHHHHHH
Confidence            6543      45899999999999876432110       0   11111111   111     12356789999999988


Q ss_pred             hcCC--CCCCCeeEecccccc
Q 023205          263 ATDP--VFPPGIVDVHGILRY  281 (286)
Q Consensus       263 l~~~--~~~~~~~~l~~~~~~  281 (286)
                      +..+  ...|+.+++.+...+
T Consensus       224 ~~~~~~~~~G~~~~~~~g~~~  244 (245)
T PRK12824        224 VSEAAGFITGETISINGGLYM  244 (245)
T ss_pred             cCccccCccCcEEEECCCeec
Confidence            8643  245889999987653

>PRK06181 short chain dehydrogenase; Provisional

Probab=99.84  E-value=3.1e-19  Score=150.55  Aligned_cols=193  Identities=11%  Similarity=0.080  Sum_probs=138.3

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc-----cccCCceeEEeccCCCHhHHHHHhc-------CCCE
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------GVTA  124 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~-----~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d~  124 (286)
                      ++||||||+|+||.++++.|+++|++|++++|+..+...     .....++.++.+|+.|.+.+..+++       ++|+
T Consensus         2 ~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   81 (263)
T PRK06181          2 KVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGIDI   81 (263)
T ss_pred             CEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            589999999999999999999999999999998643211     1123468889999999998887765       5799


Q ss_pred             EEEccccCCCc-----------chhhhhhhHHHHHHHHHHHH---cCCCEEEEEecCCcCCCCccccchHHHHHHHHHHH
Q 023205          125 VISCVGGFGSN-----------SYMYKINGTANINAIRAASE---KGVKRFVYISAADFGVANYLLQGYYEGKRAAETEL  190 (286)
Q Consensus       125 vi~~a~~~~~~-----------~~~~~~~~~~~~~l~~~a~~---~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~  190 (286)
                      ||||+|.....           ...++.|+.++.++++.+..   .+..++|++||........+...|+.+|...|.++
T Consensus        82 vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~~~~~~~  161 (263)
T PRK06181         82 LVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVSSLAGLTGVPTRSGYAASKHALHGFF  161 (263)
T ss_pred             EEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEecccccCCCCCccHHHHHHHHHHHHH
Confidence            99999865321           13468899999999888753   23468999998532233345578999999999876


Q ss_pred             HH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhc
Q 023205          191 LT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAAT  264 (286)
Q Consensus       191 ~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~  264 (286)
                      ..      ..++++++++||.+..+......              ..   ........+.....+++++|+|++++.++.
T Consensus       162 ~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~--------------~~---~~~~~~~~~~~~~~~~~~~dva~~i~~~~~  224 (263)
T PRK06181        162 DSLRIELADDGVAVTVVCPGFVATDIRKRAL--------------DG---DGKPLGKSPMQESKIMSAEECAEAILPAIA  224 (263)
T ss_pred             HHHHHHhhhcCceEEEEecCccccCcchhhc--------------cc---cccccccccccccCCCCHHHHHHHHHHHhh
Confidence            43      36899999999999765321110              00   000000111122368999999999999997


Q ss_pred             CC
Q 023205          265 DP  266 (286)
Q Consensus       265 ~~  266 (286)
                      ..
T Consensus       225 ~~  226 (263)
T PRK06181        225 RR  226 (263)
T ss_pred             CC
Confidence            54

>PRK07326 short chain dehydrogenase; Provisional

Probab=99.84  E-value=3.2e-19  Score=148.07  Aligned_cols=198  Identities=18%  Similarity=0.112  Sum_probs=141.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc--ccc--CCceeEEeccCCCHhHHHHHhc-------CCCE
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSW--ANNVIWHQGNLLSSDSWKEALD-------GVTA  124 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~--~~~--~~~~~~i~~Dl~d~~~~~~~~~-------~~d~  124 (286)
                      +++|+||||+|++|++++++|+++|++|++++|++.+...  ...  ..++.++++|+.|.+++.++++       ++|+
T Consensus         6 ~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   85 (237)
T PRK07326          6 GKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGLDV   85 (237)
T ss_pred             CCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            4789999999999999999999999999999998654211  101  1568899999999988877665       6899


Q ss_pred             EEEccccCCC----------cchhhhhhhHHHHHHHHHHHH---cCCCEEEEEecCCcCCCCccccchHHHHHHHHHHHH
Q 023205          125 VISCVGGFGS----------NSYMYKINGTANINAIRAASE---KGVKRFVYISAADFGVANYLLQGYYEGKRAAETELL  191 (286)
Q Consensus       125 vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~~---~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~  191 (286)
                      |||+++....          ....+++|+.+..++++++.+   .+.+++|++||............|..+|...+.+..
T Consensus        86 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~y~~sk~a~~~~~~  165 (237)
T PRK07326         86 LIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINISSLAGTNFFAGGAAYNASKFGLVGFSE  165 (237)
T ss_pred             EEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEECChhhccCCCCCchHHHHHHHHHHHHH
Confidence            9999986532          124567888888888887754   345689999985322233345679999998877554


Q ss_pred             H------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcC
Q 023205          192 T------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATD  265 (286)
Q Consensus       192 ~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~  265 (286)
                      .      ..|++++++|||.+..+.....                         +.  .....+++.+|+++.++.++..
T Consensus       166 ~~~~~~~~~gi~v~~v~pg~~~t~~~~~~-------------------------~~--~~~~~~~~~~d~a~~~~~~l~~  218 (237)
T PRK07326        166 AAMLDLRQYGIKVSTIMPGSVATHFNGHT-------------------------PS--EKDAWKIQPEDIAQLVLDLLKM  218 (237)
T ss_pred             HHHHHhcccCcEEEEEeeccccCcccccc-------------------------cc--hhhhccCCHHHHHHHHHHHHhC
Confidence            3      3689999999999876532110                         00  0001137899999999999976


Q ss_pred             CC-CCCCeeEeccccc
Q 023205          266 PV-FPPGIVDVHGILR  280 (286)
Q Consensus       266 ~~-~~~~~~~l~~~~~  280 (286)
                      +. .....+.+...++
T Consensus       219 ~~~~~~~~~~~~~~~~  234 (237)
T PRK07326        219 PPRTLPSKIEVRPSRP  234 (237)
T ss_pred             CccccccceEEecCCC
Confidence            64 3345666654433

>PRK07904 short chain dehydrogenase; Provisional

Probab=99.84  E-value=4.1e-19  Score=149.00  Aligned_cols=183  Identities=21%  Similarity=0.230  Sum_probs=132.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCC-CeEEEEecCCCcccc-------cccCCceeEEeccCCCHhHHHHHhc------C
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRG-LTVASLSRSGRSSLR-------DSWANNVIWHQGNLLSSDSWKEALD------G  121 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g-~~V~~l~R~~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~------~  121 (286)
                      .++|+||||+|+||++++++|+++| ++|+++.|++++...       .....+++++.+|++|.++++++++      +
T Consensus         8 ~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~g~   87 (253)
T PRK07904          8 PQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFAGGD   87 (253)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHhcCC
Confidence            5689999999999999999999995 899999998764111       1112368999999999887665543      6


Q ss_pred             CCEEEEccccCCCc-----c-----hhhhhhhHHHHH----HHHHHHHcCCCEEEEEecCCcCCCCccccchHHHHHHHH
Q 023205          122 VTAVISCVGGFGSN-----S-----YMYKINGTANIN----AIRAASEKGVKRFVYISAADFGVANYLLQGYYEGKRAAE  187 (286)
Q Consensus       122 ~d~vi~~a~~~~~~-----~-----~~~~~~~~~~~~----l~~~a~~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E  187 (286)
                      +|++||++|.....     .     +.+++|+.+...    +++.+++.+..+||++||............|+.+|...+
T Consensus        88 id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~~iv~isS~~g~~~~~~~~~Y~~sKaa~~  167 (253)
T PRK07904         88 VDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFGQIIAMSSVAGERVRRSNFVYGSTKAGLD  167 (253)
T ss_pred             CCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCceEEEEechhhcCCCCCCcchHHHHHHHH
Confidence            89999999875321     1     246888888775    455666677789999999532122234457999999887


Q ss_pred             HHHH------HhCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHH
Q 023205          188 TELL------TRYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVR  261 (286)
Q Consensus       188 ~~~~------~~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~  261 (286)
                      .+..      +..++++++++||.+..+....                      ....       ...++.+|+|+.+++
T Consensus       168 ~~~~~l~~el~~~~i~v~~v~Pg~v~t~~~~~----------------------~~~~-------~~~~~~~~~A~~i~~  218 (253)
T PRK07904        168 GFYLGLGEALREYGVRVLVVRPGQVRTRMSAH----------------------AKEA-------PLTVDKEDVAKLAVT  218 (253)
T ss_pred             HHHHHHHHHHhhcCCEEEEEeeCceecchhcc----------------------CCCC-------CCCCCHHHHHHHHHH
Confidence            5433      2568999999999997542110                      0000       124789999999999


Q ss_pred             HhcCCC
Q 023205          262 AATDPV  267 (286)
Q Consensus       262 ~l~~~~  267 (286)
                      .+.+++
T Consensus       219 ~~~~~~  224 (253)
T PRK07904        219 AVAKGK  224 (253)
T ss_pred             HHHcCC
Confidence            998764

>PRK08643 acetoin reductase; Validated

Probab=99.84  E-value=2.5e-19  Score=150.55  Aligned_cols=218  Identities=18%  Similarity=0.115  Sum_probs=144.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc---c--ccCCceeEEeccCCCHhHHHHHhc-------CCC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR---D--SWANNVIWHQGNLLSSDSWKEALD-------GVT  123 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~---~--~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d  123 (286)
                      +++++||||+|+||.++++.|+++|++|++++|+.+....   +  ....++.++++|++|++.+.++++       ++|
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   81 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLN   81 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            5789999999999999999999999999999998643211   1  112467889999999998877665       579


Q ss_pred             EEEEccccCCC----------cchhhhhhhHHHHHHHHHHHH----cC-CCEEEEEecCCcCCCCccccchHHHHHHHHH
Q 023205          124 AVISCVGGFGS----------NSYMYKINGTANINAIRAASE----KG-VKRFVYISAADFGVANYLLQGYYEGKRAAET  188 (286)
Q Consensus       124 ~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~~----~~-v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~  188 (286)
                      +||||+|....          ....+++|+.++..+++.+.+    .+ ..+||++||............|+.+|...+.
T Consensus        82 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  161 (256)
T PRK08643         82 VVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVGNPELAVYSSTKFAVRG  161 (256)
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccccCCCCCchhHHHHHHHHH
Confidence            99999986421          124567888888776666643    22 3589999995322222345679999999887


Q ss_pred             HHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHH
Q 023205          189 ELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRA  262 (286)
Q Consensus       189 ~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~  262 (286)
                      +.+.      ..|+++++++||.+..+.............+....+.....  ...++     ...+...+|+|+++..+
T Consensus       162 ~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-----~~~~~~~~~va~~~~~L  234 (256)
T PRK08643        162 LTQTAARDLASEGITVNAYAPGIVKTPMMFDIAHQVGENAGKPDEWGMEQF--AKDIT-----LGRLSEPEDVANCVSFL  234 (256)
T ss_pred             HHHHHHHHhcccCcEEEEEeeCCCcChhhhHHHhhhccccCCCchHHHHHH--hccCC-----CCCCcCHHHHHHHHHHH
Confidence            6643      46899999999999766421100000000000001100000  01111     12356899999999998


Q ss_pred             hcCC--CCCCCeeEeccccc
Q 023205          263 ATDP--VFPPGIVDVHGILR  280 (286)
Q Consensus       263 l~~~--~~~~~~~~l~~~~~  280 (286)
                      +...  ...|.++.+.|...
T Consensus       235 ~~~~~~~~~G~~i~vdgg~~  254 (256)
T PRK08643        235 AGPDSDYITGQTIIVDGGMV  254 (256)
T ss_pred             hCccccCccCcEEEeCCCee
Confidence            8654  35678888887643

>PRK06841 short chain dehydrogenase; Provisional

Probab=99.84  E-value=4.9e-19  Score=148.63  Aligned_cols=208  Identities=17%  Similarity=0.090  Sum_probs=148.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCccc--ccccCCceeEEeccCCCHhHHHHHhc-------CCCEEE
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSL--RDSWANNVIWHQGNLLSSDSWKEALD-------GVTAVI  126 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~--~~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d~vi  126 (286)
                      .++|+||||+|+||.++++.|+++|++|+++.|+.....  .+.....+.++.+|+++++++.++++       .+|+||
T Consensus        15 ~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi   94 (255)
T PRK06841         15 GKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISAFGRIDILV   94 (255)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEEE
Confidence            578999999999999999999999999999999864311  11122457789999999998877765       579999


Q ss_pred             EccccCCC----------cchhhhhhhHHHHHHHHHHHH----cCCCEEEEEecCCcCCCCccccchHHHHHHHHHHHHH
Q 023205          127 SCVGGFGS----------NSYMYKINGTANINAIRAASE----KGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLT  192 (286)
Q Consensus       127 ~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~~----~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~~  192 (286)
                      ||+|....          ....+++|+.+..++++++..    .+.++||++||............|+.+|...+.+.+.
T Consensus        95 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~  174 (255)
T PRK06841         95 NSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVVALERHVAYCASKAGVVGMTKV  174 (255)
T ss_pred             ECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhccCCCCCchHHHHHHHHHHHHHH
Confidence            99986531          123568899999988888754    3567999999953222233456799999998876653


Q ss_pred             ------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcCC
Q 023205          193 ------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDP  266 (286)
Q Consensus       193 ------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~  266 (286)
                            ..|++++.++||.+..+.....+.      +...+.+.      ..+|     ...+.+++|+|++++.++..+
T Consensus       175 la~e~~~~gi~v~~v~pg~v~t~~~~~~~~------~~~~~~~~------~~~~-----~~~~~~~~~va~~~~~l~~~~  237 (255)
T PRK06841        175 LALEWGPYGITVNAISPTVVLTELGKKAWA------GEKGERAK------KLIP-----AGRFAYPEEIAAAALFLASDA  237 (255)
T ss_pred             HHHHHHhhCeEEEEEEeCcCcCcccccccc------hhHHHHHH------hcCC-----CCCCcCHHHHHHHHHHHcCcc
Confidence                  368999999999997654321110      00001111      1122     134689999999999999764


Q ss_pred             C--CCCCeeEeccccc
Q 023205          267 V--FPPGIVDVHGILR  280 (286)
Q Consensus       267 ~--~~~~~~~l~~~~~  280 (286)
                      .  ..|+++.+.|...
T Consensus       238 ~~~~~G~~i~~dgg~~  253 (255)
T PRK06841        238 AAMITGENLVIDGGYT  253 (255)
T ss_pred             ccCccCCEEEECCCcc
Confidence            3  3578889988754

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=99.84  E-value=2.9e-19  Score=143.28  Aligned_cols=196  Identities=15%  Similarity=0.085  Sum_probs=142.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc--cccC-CceeEEeccCCCHhHHHHHh-------cCCCEE
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSWA-NNVIWHQGNLLSSDSWKEAL-------DGVTAV  125 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~--~~~~-~~~~~i~~Dl~d~~~~~~~~-------~~~d~v  125 (286)
                      .|.++||||++.||.++++.|.+.|++|++..|+.++...  .... ..+..+..|++|.++++.++       ..+|++
T Consensus         6 ~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~iDiL   85 (246)
T COG4221           6 GKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFGRIDIL   85 (246)
T ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhCcccEE
Confidence            4789999999999999999999999999999999876322  1222 46889999999998866555       368999


Q ss_pred             EEccccCC----------CcchhhhhhhHHHHHHHHHHH----HcCCCEEEEEecCCcCCCCccccchHHHHHHHHHHHH
Q 023205          126 ISCVGGFG----------SNSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELL  191 (286)
Q Consensus       126 i~~a~~~~----------~~~~~~~~~~~~~~~l~~~a~----~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~  191 (286)
                      |||||...          ++..++++|+.|..+..++..    +.+-.+||.+||...-.+.+..+.|+.+|+....+..
T Consensus        86 vNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~~~y~~~~vY~ATK~aV~~fs~  165 (246)
T COG4221          86 VNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGRYPYPGGAVYGATKAAVRAFSL  165 (246)
T ss_pred             EecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEeccccccccCCCCccchhhHHHHHHHHH
Confidence            99999752          345778999999998877764    3444589999997544444456789999999888554


Q ss_pred             H------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcC
Q 023205          192 T------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATD  265 (286)
Q Consensus       192 ~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~  265 (286)
                      .      ..+++++.+-||.+-..... .+..     ....+.+....           ....++..+|+|+++..+++.
T Consensus       166 ~LR~e~~g~~IRVt~I~PG~v~~~~~s-~v~~-----~g~~~~~~~~y-----------~~~~~l~p~dIA~~V~~~~~~  228 (246)
T COG4221         166 GLRQELAGTGIRVTVISPGLVETTEFS-TVRF-----EGDDERADKVY-----------KGGTALTPEDIAEAVLFAATQ  228 (246)
T ss_pred             HHHHHhcCCCeeEEEecCceecceecc-cccC-----CchhhhHHHHh-----------ccCCCCCHHHHHHHHHHHHhC
Confidence            2      36899999999999543111 0000     00001111110           123468999999999999998


Q ss_pred             CCC
Q 023205          266 PVF  268 (286)
Q Consensus       266 ~~~  268 (286)
                      |..
T Consensus       229 P~~  231 (246)
T COG4221         229 PQH  231 (246)
T ss_pred             CCc
Confidence            875

>PRK07856 short chain dehydrogenase; Provisional

Probab=99.84  E-value=8.1e-19  Score=147.12  Aligned_cols=208  Identities=18%  Similarity=0.149  Sum_probs=147.9

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhc-------CCCEEEE
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD-------GVTAVIS  127 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d~vi~  127 (286)
                      +.++++||||+|+||++++++|+++|++|++++|+.++   .....+++++++|+.|+++++++++       .+|+|||
T Consensus         5 ~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~---~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~   81 (252)
T PRK07856          5 TGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE---TVDGRPAEFHAADVRDPDQVAALVDAIVERHGRLDVLVN   81 (252)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh---hhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            35799999999999999999999999999999998654   1123478899999999998887775       3599999


Q ss_pred             ccccCCC----------cchhhhhhhHHHHHHHHHHHH-----cCCCEEEEEecCCcCCCCccccchHHHHHHHHHHHHH
Q 023205          128 CVGGFGS----------NSYMYKINGTANINAIRAASE-----KGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLT  192 (286)
Q Consensus       128 ~a~~~~~----------~~~~~~~~~~~~~~l~~~a~~-----~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~~  192 (286)
                      |||....          ....+++|+.++.++++++..     .+..+||++||............|+.+|...|.+++.
T Consensus        82 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a~~~l~~~  161 (252)
T PRK07856         82 NAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRPSPGTAAYGAAKAGLLNLTRS  161 (252)
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCCCCCCCchhHHHHHHHHHHHHH
Confidence            9986421          124568999999999888754     1335899999964333334567899999999987753


Q ss_pred             -----hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcCC-
Q 023205          193 -----RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDP-  266 (286)
Q Consensus       193 -----~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~-  266 (286)
                           ...++++.++||.+..+.....+       .. .+......   ...|.     ..+...+|+|++++.++..+ 
T Consensus       162 la~e~~~~i~v~~i~Pg~v~t~~~~~~~-------~~-~~~~~~~~---~~~~~-----~~~~~p~~va~~~~~L~~~~~  225 (252)
T PRK07856        162 LAVEWAPKVRVNAVVVGLVRTEQSELHY-------GD-AEGIAAVA---ATVPL-----GRLATPADIAWACLFLASDLA  225 (252)
T ss_pred             HHHHhcCCeEEEEEEeccccChHHhhhc-------cC-HHHHHHHh---hcCCC-----CCCcCHHHHHHHHHHHcCccc
Confidence                 12389999999998765321110       00 01111111   11221     23568899999999998753 


Q ss_pred             -CCCCCeeEecccccc
Q 023205          267 -VFPPGIVDVHGILRY  281 (286)
Q Consensus       267 -~~~~~~~~l~~~~~~  281 (286)
                       ...|..+.+.|+...
T Consensus       226 ~~i~G~~i~vdgg~~~  241 (252)
T PRK07856        226 SYVSGANLEVHGGGER  241 (252)
T ss_pred             CCccCCEEEECCCcch
Confidence             346788899886654

>PRK07825 short chain dehydrogenase; Provisional

Probab=99.84  E-value=2.2e-19  Score=152.39  Aligned_cols=185  Identities=16%  Similarity=0.098  Sum_probs=134.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccc-cCCceeEEeccCCCHhHHHHHhc-------CCCEEEE
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDS-WANNVIWHQGNLLSSDSWKEALD-------GVTAVIS  127 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~-~~~~~~~i~~Dl~d~~~~~~~~~-------~~d~vi~  127 (286)
                      +++++||||+|+||++++++|+++|++|++++|++++..... ...++.++.+|++|++++.++++       ++|++||
T Consensus         5 ~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~   84 (273)
T PRK07825          5 GKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELGLVVGGPLDVTDPASFAAFLDAVEADLGPIDVLVN   84 (273)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            468999999999999999999999999999999865422111 11257889999999988766553       5799999


Q ss_pred             ccccCCC----------cchhhhhhhHHHHHHHHHH----HHcCCCEEEEEecCCcCCCCccccchHHHHHHHHHHHHH-
Q 023205          128 CVGGFGS----------NSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLT-  192 (286)
Q Consensus       128 ~a~~~~~----------~~~~~~~~~~~~~~l~~~a----~~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~~-  192 (286)
                      |+|....          ....+++|+.++.++++.+    .+.+..+||++||............|+.+|...+.+... 
T Consensus        85 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~l  164 (273)
T PRK07825         85 NAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGKIPVPGMATYCASKHAVVGFTDAA  164 (273)
T ss_pred             CCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCccccCCCCCCcchHHHHHHHHHHHHHH
Confidence            9986431          1245678988888776665    445667999999954333344566899999987764432 


Q ss_pred             -----hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcCCC
Q 023205          193 -----RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDPV  267 (286)
Q Consensus       193 -----~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~~  267 (286)
                           ..|+++++++||.+..+.....                         +  +.....+++++|+|++++.++.++.
T Consensus       165 ~~el~~~gi~v~~v~Pg~v~t~~~~~~-------------------------~--~~~~~~~~~~~~va~~~~~~l~~~~  217 (273)
T PRK07825        165 RLELRGTGVHVSVVLPSFVNTELIAGT-------------------------G--GAKGFKNVEPEDVAAAIVGTVAKPR  217 (273)
T ss_pred             HHHhhccCcEEEEEeCCcCcchhhccc-------------------------c--cccCCCCCCHHHHHHHHHHHHhCCC
Confidence                 4689999999998854321100                         0  0112346899999999999998765

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=99.84  E-value=1.6e-19  Score=150.98  Aligned_cols=208  Identities=14%  Similarity=0.102  Sum_probs=145.1

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc---cccCCceeEEeccCCCHhHHHHHhc-------CCCE
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR---DSWANNVIWHQGNLLSSDSWKEALD-------GVTA  124 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~---~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d~  124 (286)
                      +.++|+||||+|+||.+++++|+++|++|+++.|+......   .....++.++.+|+++.+++..+++       ++|+
T Consensus         4 ~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   83 (248)
T TIGR01832         4 EGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFGHIDI   83 (248)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            35799999999999999999999999999999987532111   1123468899999999998876654       5899


Q ss_pred             EEEccccCCC----------cchhhhhhhHHHHHHHHHHHH----cC-CCEEEEEecCCcCCCCccccchHHHHHHHHHH
Q 023205          125 VISCVGGFGS----------NSYMYKINGTANINAIRAASE----KG-VKRFVYISAADFGVANYLLQGYYEGKRAAETE  189 (286)
Q Consensus       125 vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~~----~~-v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~  189 (286)
                      +|||+|....          ....+++|+.+..++++++.+    .+ ..++|++||............|+.+|...+.+
T Consensus        84 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~~  163 (248)
T TIGR01832        84 LVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGGIRVPSYTASKHGVAGL  163 (248)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCCCCCchhHHHHHHHHHH
Confidence            9999986431          124467899998888887753    33 45899999952212223456799999999987


Q ss_pred             HHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHh
Q 023205          190 LLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAA  263 (286)
Q Consensus       190 ~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l  263 (286)
                      .+.      ..|+++++++||.+..+......       .. ........   ..+|     ...|++.+|+|++++.++
T Consensus       164 ~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~-------~~-~~~~~~~~---~~~~-----~~~~~~~~dva~~~~~l~  227 (248)
T TIGR01832       164 TKLLANEWAAKGINVNAIAPGYMATNNTQALR-------AD-EDRNAAIL---ERIP-----AGRWGTPDDIGGPAVFLA  227 (248)
T ss_pred             HHHHHHHhCccCcEEEEEEECcCcCcchhccc-------cC-hHHHHHHH---hcCC-----CCCCcCHHHHHHHHHHHc
Confidence            753      35899999999999766422110       00 00000000   1122     235789999999999999


Q ss_pred             cCCC--CCCCeeEeccc
Q 023205          264 TDPV--FPPGIVDVHGI  278 (286)
Q Consensus       264 ~~~~--~~~~~~~l~~~  278 (286)
                      ....  ..|.++.+.|.
T Consensus       228 s~~~~~~~G~~i~~dgg  244 (248)
T TIGR01832       228 SSASDYVNGYTLAVDGG  244 (248)
T ss_pred             CccccCcCCcEEEeCCC
Confidence            7533  34777777665

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK09186 flagellin modification protein A; Provisional

Probab=99.84  E-value=3.3e-19  Score=149.70  Aligned_cols=202  Identities=13%  Similarity=0.071  Sum_probs=138.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc-------cccCCceeEEeccCCCHhHHHHHhcC-------
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-------DSWANNVIWHQGNLLSSDSWKEALDG-------  121 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~-------  121 (286)
                      .++|+||||+|+||+++++.|+++|++|+++.|+.++...       ......+.++.+|++|++++.+++++       
T Consensus         4 ~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~   83 (256)
T PRK09186          4 GKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKYGK   83 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            5789999999999999999999999999999998654211       11123567789999999998887763       


Q ss_pred             CCEEEEccccCCC-------------cchhhhhhhHHHHHHHHH----HHHcCCCEEEEEecCC-cCCCC---------c
Q 023205          122 VTAVISCVGGFGS-------------NSYMYKINGTANINAIRA----ASEKGVKRFVYISAAD-FGVAN---------Y  174 (286)
Q Consensus       122 ~d~vi~~a~~~~~-------------~~~~~~~~~~~~~~l~~~----a~~~~v~~~v~~Ss~~-~~~~~---------~  174 (286)
                      +|+|||||+....             ....+++|+.+...++++    +++.+.++||++||.. +....         .
T Consensus        84 id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~  163 (256)
T PRK09186         84 IDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAPKFEIYEGTSMT  163 (256)
T ss_pred             ccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhhccccchhccccccC
Confidence            7999999975321             123456677766655544    4445677999999942 21110         1


Q ss_pred             cccchHHHHHHHHHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCC
Q 023205          175 LLQGYYEGKRAAETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTP  248 (286)
Q Consensus       175 ~~~~y~~sK~~~E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  248 (286)
                      ....|+.+|...|.+.+.      ..++++++++||.++++...              . +.......  .+     ...
T Consensus       164 ~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~~~--------------~-~~~~~~~~--~~-----~~~  221 (256)
T PRK09186        164 SPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQPE--------------A-FLNAYKKC--CN-----GKG  221 (256)
T ss_pred             CcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCCCH--------------H-HHHHHHhc--CC-----ccC
Confidence            123699999999887642      46899999999988754310              0 11111100  11     124


Q ss_pred             CccHHHHHHHHHHHhcCCC--CCCCeeEecccc
Q 023205          249 PVNVTVVAKVAVRAATDPV--FPPGIVDVHGIL  279 (286)
Q Consensus       249 ~i~v~Dva~~~~~~l~~~~--~~~~~~~l~~~~  279 (286)
                      +++++|+|++++.++.+..  ..++.+.+.+..
T Consensus       222 ~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~g~  254 (256)
T PRK09186        222 MLDPDDICGTLVFLLSDQSKYITGQNIIVDDGF  254 (256)
T ss_pred             CCCHHHhhhhHhheeccccccccCceEEecCCc
Confidence            6899999999999997543  347788887753

>PRK07577 short chain dehydrogenase; Provisional

Probab=99.84  E-value=1.3e-18  Score=144.15  Aligned_cols=202  Identities=20%  Similarity=0.161  Sum_probs=142.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhc------CCCEEEEcc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD------GVTAVISCV  129 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~------~~d~vi~~a  129 (286)
                      .++|+||||+|+||++++++|+++|++|+++.|+..+..      ..+++.+|++|.++++++++      ++|+||||+
T Consensus         3 ~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~~------~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~a   76 (234)
T PRK07577          3 SRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDDF------PGELFACDLADIEQTAATLAQINEIHPVDAIVNNV   76 (234)
T ss_pred             CCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCccccc------CceEEEeeCCCHHHHHHHHHHHHHhCCCcEEEECC
Confidence            468999999999999999999999999999999875521      23678999999998887775      589999999


Q ss_pred             ccCCCc----------chhhhhhhHHHHHHHHHH----HHcCCCEEEEEecCCcCCCCccccchHHHHHHHHHHHHH---
Q 023205          130 GGFGSN----------SYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLT---  192 (286)
Q Consensus       130 ~~~~~~----------~~~~~~~~~~~~~l~~~a----~~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~~---  192 (286)
                      |.....          ...+++|+.+..++.+++    ++.+..+||++||... ........|+.+|...|.++..   
T Consensus        77 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~-~~~~~~~~Y~~sK~a~~~~~~~~a~  155 (234)
T PRK07577         77 GIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRAI-FGALDRTSYSAAKSALVGCTRTWAL  155 (234)
T ss_pred             CCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccccc-cCCCCchHHHHHHHHHHHHHHHHHH
Confidence            875321          235678888877765554    4456779999999531 1223456899999999987653   


Q ss_pred             ---hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcCCC--
Q 023205          193 ---RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDPV--  267 (286)
Q Consensus       193 ---~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~~--  267 (286)
                         ..|++++++|||.+..+.....  .+.   ..  .......   ...+.     ......+|+|++++.++..+.  
T Consensus       156 e~~~~gi~v~~i~pg~~~t~~~~~~--~~~---~~--~~~~~~~---~~~~~-----~~~~~~~~~a~~~~~l~~~~~~~  220 (234)
T PRK07577        156 ELAEYGITVNAVAPGPIETELFRQT--RPV---GS--EEEKRVL---ASIPM-----RRLGTPEEVAAAIAFLLSDDAGF  220 (234)
T ss_pred             HHHhhCcEEEEEecCcccCcccccc--ccc---ch--hHHHHHh---hcCCC-----CCCcCHHHHHHHHHHHhCcccCC
Confidence               4689999999999976542111  000   00  0000000   01111     124578999999999997653  


Q ss_pred             CCCCeeEecccc
Q 023205          268 FPPGIVDVHGIL  279 (286)
Q Consensus       268 ~~~~~~~l~~~~  279 (286)
                      ..++.+.+.|..
T Consensus       221 ~~g~~~~~~g~~  232 (234)
T PRK07577        221 ITGQVLGVDGGG  232 (234)
T ss_pred             ccceEEEecCCc
Confidence            457888887764

>PRK06701 short chain dehydrogenase; Provisional

Probab=99.84  E-value=1.4e-18  Score=148.57  Aligned_cols=209  Identities=15%  Similarity=0.092  Sum_probs=148.4

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc------cccCCceeEEeccCCCHhHHHHHhc-------C
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD-------G  121 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~------~~~~~~~~~i~~Dl~d~~~~~~~~~-------~  121 (286)
                      +.+++|||||+|+||.+++++|+++|++|+++.|+..+...      .....++.++.+|++|.+.+.++++       .
T Consensus        45 ~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~~~  124 (290)
T PRK06701         45 KGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRELGR  124 (290)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            35789999999999999999999999999999987643211      1112467899999999998887764       4


Q ss_pred             CCEEEEccccCCC-----------cchhhhhhhHHHHHHHHHHHHc--CCCEEEEEecCCcCCCCccccchHHHHHHHHH
Q 023205          122 VTAVISCVGGFGS-----------NSYMYKINGTANINAIRAASEK--GVKRFVYISAADFGVANYLLQGYYEGKRAAET  188 (286)
Q Consensus       122 ~d~vi~~a~~~~~-----------~~~~~~~~~~~~~~l~~~a~~~--~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~  188 (286)
                      +|+||||||....           ....+++|+.++.++++++...  ...+||++||............|+.+|...+.
T Consensus       125 iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~~sK~a~~~  204 (290)
T PRK06701        125 LDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSITGYEGNETLIDYSATKGAIHA  204 (290)
T ss_pred             CCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecccccCCCCCcchhHHHHHHHHH
Confidence            7999999986421           1245789999999999988653  23589999995322222334679999999998


Q ss_pred             HHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHH
Q 023205          189 ELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRA  262 (286)
Q Consensus       189 ~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~  262 (286)
                      +++.      ..|+++++++||.+..+......         ..+.+....   ...     ....+.+++|+|++++.+
T Consensus       205 l~~~la~~~~~~gIrv~~i~pG~v~T~~~~~~~---------~~~~~~~~~---~~~-----~~~~~~~~~dva~~~~~l  267 (290)
T PRK06701        205 FTRSLAQSLVQKGIRVNAVAPGPIWTPLIPSDF---------DEEKVSQFG---SNT-----PMQRPGQPEELAPAYVFL  267 (290)
T ss_pred             HHHHHHHHhhhcCeEEEEEecCCCCCccccccc---------CHHHHHHHH---hcC-----CcCCCcCHHHHHHHHHHH
Confidence            7653      35899999999999876432110         001111110   011     123468999999999999


Q ss_pred             hcCCC--CCCCeeEeccccc
Q 023205          263 ATDPV--FPPGIVDVHGILR  280 (286)
Q Consensus       263 l~~~~--~~~~~~~l~~~~~  280 (286)
                      +....  ..+.++++.|...
T Consensus       268 l~~~~~~~~G~~i~idgg~~  287 (290)
T PRK06701        268 ASPDSSYITGQMLHVNGGVI  287 (290)
T ss_pred             cCcccCCccCcEEEeCCCcc
Confidence            97643  4578899988643

>PRK06101 short chain dehydrogenase; Provisional

Probab=99.84  E-value=3e-19  Score=148.64  Aligned_cols=184  Identities=15%  Similarity=0.100  Sum_probs=137.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc-cccCCceeEEeccCCCHhHHHHHhcC----CCEEEEccc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-DSWANNVIWHQGNLLSSDSWKEALDG----VTAVISCVG  130 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~-~~~~~~~~~i~~Dl~d~~~~~~~~~~----~d~vi~~a~  130 (286)
                      +++++||||+|+||.+++++|+++|++|++++|+++.... .....++.++.+|++|.+++++++++    .|.++|++|
T Consensus         1 ~~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~~i~~ag   80 (240)
T PRK06101          1 MTAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQSANIFTLAFDVTDHPGTKAALSQLPFIPELWIFNAG   80 (240)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCCCeEEEeeCCCHHHHHHHHHhcccCCCEEEEcCc
Confidence            3689999999999999999999999999999998644211 11124688999999999999988875    489999997


Q ss_pred             cCCC----------cchhhhhhhHHHHHHHHHHHHc--CCCEEEEEecCCcCCCCccccchHHHHHHHHHHHH------H
Q 023205          131 GFGS----------NSYMYKINGTANINAIRAASEK--GVKRFVYISAADFGVANYLLQGYYEGKRAAETELL------T  192 (286)
Q Consensus       131 ~~~~----------~~~~~~~~~~~~~~l~~~a~~~--~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~------~  192 (286)
                      ....          ....+++|+.++.++++++...  ..+++|++||............|+.+|...+.+.+      .
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~l~~e~~  160 (240)
T PRK06101         81 DCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGSIASELALPRAEAYGASKAAVAYFARTLQLDLR  160 (240)
T ss_pred             ccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEechhhccCCCCCchhhHHHHHHHHHHHHHHHHHH
Confidence            5321          1246789999999999988753  23579999985322223345679999999998764      2


Q ss_pred             hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcCCC
Q 023205          193 RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDPV  267 (286)
Q Consensus       193 ~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~~  267 (286)
                      ..|++++++|||.+.++.....                   .  ...+       ..++.+|+|+.++..++.+.
T Consensus       161 ~~gi~v~~v~pg~i~t~~~~~~-------------------~--~~~~-------~~~~~~~~a~~i~~~i~~~~  207 (240)
T PRK06101        161 PKGIEVVTVFPGFVATPLTDKN-------------------T--FAMP-------MIITVEQASQEIRAQLARGK  207 (240)
T ss_pred             hcCceEEEEeCCcCCCCCcCCC-------------------C--CCCC-------cccCHHHHHHHHHHHHhcCC
Confidence            5689999999999987643210                   0  0001       13789999999999998754

>PRK12937 short chain dehydrogenase; Provisional

Probab=99.84  E-value=8.2e-19  Score=146.31  Aligned_cols=206  Identities=16%  Similarity=0.113  Sum_probs=146.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc------cccCCceeEEeccCCCHhHHHHHhc-------CC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD-------GV  122 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~------~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~  122 (286)
                      .++|+||||+|+||+++++.|+++|++|+++.|+......      .....++.++.+|++|.++++++++       ++
T Consensus         5 ~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   84 (245)
T PRK12937          5 NKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFGRI   84 (245)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            5789999999999999999999999999888776432111      1123468899999999998888776       58


Q ss_pred             CEEEEccccCCC----------cchhhhhhhHHHHHHHHHHHHc--CCCEEEEEecCCcCCCCccccchHHHHHHHHHHH
Q 023205          123 TAVISCVGGFGS----------NSYMYKINGTANINAIRAASEK--GVKRFVYISAADFGVANYLLQGYYEGKRAAETEL  190 (286)
Q Consensus       123 d~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~~~--~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~  190 (286)
                      |+|||++|....          ....+++|+.++.++++++.+.  ...+||++||.......+....|+.+|...+.++
T Consensus        85 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~  164 (245)
T PRK12937         85 DVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSVIALPLPGYGPYAASKAAVEGLV  164 (245)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeeccccCCCCCCchhHHHHHHHHHHH
Confidence            999999986431          1245678999999988887653  2358999999655555556678999999999877


Q ss_pred             HH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhc
Q 023205          191 LT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAAT  264 (286)
Q Consensus       191 ~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~  264 (286)
                      +.      ..++++++++||.+-.+.....         .....+.... .  ..|     ...+.+++|+|+++..++.
T Consensus       165 ~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~---------~~~~~~~~~~-~--~~~-----~~~~~~~~d~a~~~~~l~~  227 (245)
T PRK12937        165 HVLANELRGRGITVNAVAPGPVATELFFNG---------KSAEQIDQLA-G--LAP-----LERLGTPEEIAAAVAFLAG  227 (245)
T ss_pred             HHHHHHhhhcCeEEEEEEeCCccCchhccc---------CCHHHHHHHH-h--cCC-----CCCCCCHHHHHHHHHHHcC
Confidence            53      3579999999998865431110         0001111111 1  111     1235688999999999987


Q ss_pred             CCC--CCCCeeEeccc
Q 023205          265 DPV--FPPGIVDVHGI  278 (286)
Q Consensus       265 ~~~--~~~~~~~l~~~  278 (286)
                      .+.  ..++++++.+.
T Consensus       228 ~~~~~~~g~~~~~~~g  243 (245)
T PRK12937        228 PDGAWVNGQVLRVNGG  243 (245)
T ss_pred             ccccCccccEEEeCCC
Confidence            543  34778888764

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=99.84  E-value=5e-19  Score=134.76  Aligned_cols=197  Identities=22%  Similarity=0.250  Sum_probs=148.5

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccccCCCcc
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFGSNS  136 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~~~~~~  136 (286)
                      |||.|+||||.+|++++++.+++||+|++++|++.+....   +++.+++.|+.|++.+.+.+.+.|+||..-+......
T Consensus         1 mKIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~---~~~~i~q~Difd~~~~a~~l~g~DaVIsA~~~~~~~~   77 (211)
T COG2910           1 MKIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR---QGVTILQKDIFDLTSLASDLAGHDAVISAFGAGASDN   77 (211)
T ss_pred             CeEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc---ccceeecccccChhhhHhhhcCCceEEEeccCCCCCh
Confidence            6899999999999999999999999999999998774321   6788999999999999999999999999877653222


Q ss_pred             hhhhhhhHHHHHHHHHHHHcCCCEEEEEecCC----------cCCCCccccchHHHHHHHH--HHHHHhCCCcEEEEeeC
Q 023205          137 YMYKINGTANINAIRAASEKGVKRFVYISAAD----------FGVANYLLQGYYEGKRAAE--TELLTRYPYGGVILRPG  204 (286)
Q Consensus       137 ~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~~----------~~~~~~~~~~y~~sK~~~E--~~~~~~~g~~~~ilRp~  204 (286)
                      ...  .......+++..+.++++|++.+..+.          ...+..|...|...+..+|  ..++....++||.+.|.
T Consensus        78 ~~~--~~k~~~~li~~l~~agv~RllVVGGAGSL~id~g~rLvD~p~fP~ey~~~A~~~ae~L~~Lr~~~~l~WTfvSPa  155 (211)
T COG2910          78 DEL--HSKSIEALIEALKGAGVPRLLVVGGAGSLEIDEGTRLVDTPDFPAEYKPEALAQAEFLDSLRAEKSLDWTFVSPA  155 (211)
T ss_pred             hHH--HHHHHHHHHHHHhhcCCeeEEEEcCccceEEcCCceeecCCCCchhHHHHHHHHHHHHHHHhhccCcceEEeCcH
Confidence            111  112245678888888999999998742          1234456666778888888  45555566999999999


Q ss_pred             eeecCCCCCc-cccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcCCCCCCCeeEec
Q 023205          205 FIYGTRTVGG-MKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDPVFPPGIVDVH  276 (286)
Q Consensus       205 ~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~l~  276 (286)
                      .++-|+.... +..-                 ...+ .....-.++|+..|.|-++++.++++.+.++-|.+.
T Consensus       156 a~f~PGerTg~yrlg-----------------gD~l-l~n~~G~SrIS~aDYAiA~lDe~E~~~h~rqRftv~  210 (211)
T COG2910         156 AFFEPGERTGNYRLG-----------------GDQL-LVNAKGESRISYADYAIAVLDELEKPQHIRQRFTVA  210 (211)
T ss_pred             HhcCCccccCceEec-----------------cceE-EEcCCCceeeeHHHHHHHHHHHHhcccccceeeeec
Confidence            9999865422 2110                 0111 111223578999999999999999999887777653

>PRK06483 dihydromonapterin reductase; Provisional

Probab=99.83  E-value=6.6e-19  Score=146.20  Aligned_cols=206  Identities=15%  Similarity=0.084  Sum_probs=143.5

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhc-------CCCEEEE
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD-------GVTAVIS  127 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d~vi~  127 (286)
                      |.++++||||+|+||++++++|+++|++|++++|++++........++.++.+|+.|.++++++++       .+|++||
T Consensus         1 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~   80 (236)
T PRK06483          1 MPAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLRQAGAQCIQADFSTNAGIMAFIDELKQHTDGLRAIIH   80 (236)
T ss_pred             CCceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCEEEEcCCCCHHHHHHHHHHHHhhCCCccEEEE
Confidence            457899999999999999999999999999999987543222222357889999999988776653       4799999


Q ss_pred             ccccCCC----------cchhhhhhhHHHHHHHHHHHH----cC--CCEEEEEecCCcCCCCccccchHHHHHHHHHHHH
Q 023205          128 CVGGFGS----------NSYMYKINGTANINAIRAASE----KG--VKRFVYISAADFGVANYLLQGYYEGKRAAETELL  191 (286)
Q Consensus       128 ~a~~~~~----------~~~~~~~~~~~~~~l~~~a~~----~~--v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~  191 (286)
                      |||....          ....+++|+.++..+.+.+..    .+  ..++|++||............|+.+|...|.+++
T Consensus        81 ~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~asKaal~~l~~  160 (236)
T PRK06483         81 NASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEKGSDKHIAYAASKAALDNMTL  160 (236)
T ss_pred             CCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhccCCCCCccHHHHHHHHHHHHH
Confidence            9985321          124567888888766665543    23  3589999985433333345689999999999775


Q ss_pred             H-----hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcCC
Q 023205          192 T-----RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDP  266 (286)
Q Consensus       192 ~-----~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~  266 (286)
                      .     ..++++++|+||.+.-+....         .   . .......  ..|.     ..+...+|+|+++..++...
T Consensus       161 ~~a~e~~~~irvn~v~Pg~~~~~~~~~---------~---~-~~~~~~~--~~~~-----~~~~~~~~va~~~~~l~~~~  220 (236)
T PRK06483        161 SFAAKLAPEVKVNSIAPALILFNEGDD---------A---A-YRQKALA--KSLL-----KIEPGEEEIIDLVDYLLTSC  220 (236)
T ss_pred             HHHHHHCCCcEEEEEccCceecCCCCC---------H---H-HHHHHhc--cCcc-----ccCCCHHHHHHHHHHHhcCC
Confidence            3     235999999999885321100         0   0 1111111  1111     12357899999999999866


Q ss_pred             CCCCCeeEeccccc
Q 023205          267 VFPPGIVDVHGILR  280 (286)
Q Consensus       267 ~~~~~~~~l~~~~~  280 (286)
                      ...|+++.+.|...
T Consensus       221 ~~~G~~i~vdgg~~  234 (236)
T PRK06483        221 YVTGRSLPVDGGRH  234 (236)
T ss_pred             CcCCcEEEeCcccc
Confidence            66788888887654

>PRK12743 oxidoreductase; Provisional

Probab=99.83  E-value=3.2e-19  Score=149.90  Aligned_cols=210  Identities=12%  Similarity=0.083  Sum_probs=147.9

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc------cccCCceeEEeccCCCHhHHHHHhc-------C
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD-------G  121 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~------~~~~~~~~~i~~Dl~d~~~~~~~~~-------~  121 (286)
                      ++++|+||||+|+||.++++.|+++|++|+++.|+..+...      .....++.++.+|++|+++++++++       .
T Consensus         1 ~~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   80 (256)
T PRK12743          1 MAQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGR   80 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            35789999999999999999999999999988765433211      1123468899999999988777664       4


Q ss_pred             CCEEEEccccCCC----------cchhhhhhhHHHHHHHHHHHHcC-----CCEEEEEecCCcCCCCccccchHHHHHHH
Q 023205          122 VTAVISCVGGFGS----------NSYMYKINGTANINAIRAASEKG-----VKRFVYISAADFGVANYLLQGYYEGKRAA  186 (286)
Q Consensus       122 ~d~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~~~~-----v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~  186 (286)
                      +|+|||++|....          ....+.+|+.+...+++++....     -.+||++||........+...|+.+|...
T Consensus        81 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a~  160 (256)
T PRK12743         81 IDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEHTPLPGASAYTAAKHAL  160 (256)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeeccccCCCCCcchhHHHHHHH
Confidence            7999999986431          12456889999999988775432     24899999964333344567899999999


Q ss_pred             HHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHH
Q 023205          187 ETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAV  260 (286)
Q Consensus       187 E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~  260 (286)
                      +.+++.      ..|++++.++||.+.++......       .   +.... ..  ...|.     ..+.+.+|+|+++.
T Consensus       161 ~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~~~~-------~---~~~~~-~~--~~~~~-----~~~~~~~dva~~~~  222 (256)
T PRK12743        161 GGLTKAMALELVEHGILVNAVAPGAIATPMNGMDD-------S---DVKPD-SR--PGIPL-----GRPGDTHEIASLVA  222 (256)
T ss_pred             HHHHHHHHHHhhhhCeEEEEEEeCCccCccccccC-------h---HHHHH-HH--hcCCC-----CCCCCHHHHHHHHH
Confidence            887653      45899999999999876432110       0   00100 11  11221     12468899999999


Q ss_pred             HHhcCCC--CCCCeeEeccccccc
Q 023205          261 RAATDPV--FPPGIVDVHGILRYS  282 (286)
Q Consensus       261 ~~l~~~~--~~~~~~~l~~~~~~s  282 (286)
                      .++....  ..|.++.+.|...+.
T Consensus       223 ~l~~~~~~~~~G~~~~~dgg~~~~  246 (256)
T PRK12743        223 WLCSEGASYTTGQSLIVDGGFMLA  246 (256)
T ss_pred             HHhCccccCcCCcEEEECCCcccc
Confidence            9887543  457888888875443

>PRK06500 short chain dehydrogenase; Provisional

Probab=99.83  E-value=7.7e-19  Score=146.83  Aligned_cols=211  Identities=18%  Similarity=0.091  Sum_probs=142.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc--cccCCceeEEeccCCCHhHHHHHhc-------CCCEEE
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSWANNVIWHQGNLLSSDSWKEALD-------GVTAVI  126 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~--~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d~vi  126 (286)
                      .++|+||||+|+||++++++|+++|++|+++.|+.+....  .....++.++++|++|.+++..+++       ++|+||
T Consensus         6 ~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi   85 (249)
T PRK06500          6 GKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEAFGRLDAVF   85 (249)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEEE
Confidence            5789999999999999999999999999999997543211  1123467889999999887665543       589999


Q ss_pred             EccccCCC----------cchhhhhhhHHHHHHHHHHHHc--CCCEEEEEecCCcCCCCccccchHHHHHHHHHHHHH--
Q 023205          127 SCVGGFGS----------NSYMYKINGTANINAIRAASEK--GVKRFVYISAADFGVANYLLQGYYEGKRAAETELLT--  192 (286)
Q Consensus       127 ~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~~~--~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~~--  192 (286)
                      ||+|....          ....+++|+.++.++++++...  ...++|++||............|+.+|...|.+++.  
T Consensus        86 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~~S~~~~~~~~~~~~Y~~sK~a~~~~~~~la  165 (249)
T PRK06500         86 INAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPASIVLNGSINAHIGMPNSSVYAASKAALLSLAKTLS  165 (249)
T ss_pred             ECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEechHhccCCCCccHHHHHHHHHHHHHHHHH
Confidence            99986431          1245789999999999998752  234778877742212233457899999999987742  


Q ss_pred             ----hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcCCC-
Q 023205          193 ----RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDPV-  267 (286)
Q Consensus       193 ----~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~~-  267 (286)
                          ..|++++++|||.++++..... ..+    ......+.+.....  .|.     ..+.+++|+|+++..++..+. 
T Consensus       166 ~e~~~~gi~v~~i~pg~~~t~~~~~~-~~~----~~~~~~~~~~~~~~--~~~-----~~~~~~~~va~~~~~l~~~~~~  233 (249)
T PRK06500        166 GELLPRGIRVNAVSPGPVQTPLYGKL-GLP----EATLDAVAAQIQAL--VPL-----GRFGTPEEIAKAVLYLASDESA  233 (249)
T ss_pred             HHhhhcCeEEEEEeeCcCCCHHHHhh-ccC----ccchHHHHHHHHhc--CCC-----CCCcCHHHHHHHHHHHcCcccc
Confidence                3589999999999988742110 000    00111111111111  111     124588999999999887543 


Q ss_pred             -CCCCeeEeccc
Q 023205          268 -FPPGIVDVHGI  278 (286)
Q Consensus       268 -~~~~~~~l~~~  278 (286)
                       ..+..+.+.|.
T Consensus       234 ~~~g~~i~~~gg  245 (249)
T PRK06500        234 FIVGSEIIVDGG  245 (249)
T ss_pred             CccCCeEEECCC
Confidence             34566666654

>PRK08264 short chain dehydrogenase; Validated

Probab=99.83  E-value=4.1e-19  Score=147.56  Aligned_cols=153  Identities=22%  Similarity=0.128  Sum_probs=119.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhc---CCCEEEEcccc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD---GVTAVISCVGG  131 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~---~~d~vi~~a~~  131 (286)
                      .++|+||||+|++|+++++.|+++|+ +|++++|+.++...  ...++.++.+|+.|.+.+.++++   .+|+|||++|.
T Consensus         6 ~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag~   83 (238)
T PRK08264          6 GKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD--LGPRVVPLQLDVTDPASVAAAAEAASDVTILVNNAGI   83 (238)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh--cCCceEEEEecCCCHHHHHHHHHhcCCCCEEEECCCc
Confidence            46899999999999999999999998 99999998765322  33578999999999999888876   47999999987


Q ss_pred             C-CC----------cchhhhhhhHHHHHHHHHHH----HcCCCEEEEEecCCcCCCCccccchHHHHHHHHHHHHH----
Q 023205          132 F-GS----------NSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLT----  192 (286)
Q Consensus       132 ~-~~----------~~~~~~~~~~~~~~l~~~a~----~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~~----  192 (286)
                      . ..          ....+++|+.+..++++++.    +.+.++||++||........+...|+.+|...|.+...    
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~~~~~y~~sK~a~~~~~~~l~~~  163 (238)
T PRK08264         84 FRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWVNFPNLGTYSASKAAAWSLTQALRAE  163 (238)
T ss_pred             CCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhccCCCCchHhHHHHHHHHHHHHHHHHH
Confidence            2 11          12346788899988888764    34567899999953222234456799999999986653    


Q ss_pred             --hCCCcEEEEeeCeeecCC
Q 023205          193 --RYPYGGVILRPGFIYGTR  210 (286)
Q Consensus       193 --~~g~~~~ilRp~~v~g~~  210 (286)
                        ..+++++++|||.+.++.
T Consensus       164 ~~~~~i~~~~v~pg~v~t~~  183 (238)
T PRK08264        164 LAPQGTRVLGVHPGPIDTDM  183 (238)
T ss_pred             hhhcCeEEEEEeCCcccccc
Confidence              358999999999997653

>PRK07102 short chain dehydrogenase; Provisional

Probab=99.83  E-value=3e-19  Score=148.93  Aligned_cols=184  Identities=22%  Similarity=0.190  Sum_probs=136.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc------cccCCceeEEeccCCCHhHHHHHhcC----CCEE
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALDG----VTAV  125 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~------~~~~~~~~~i~~Dl~d~~~~~~~~~~----~d~v  125 (286)
                      ||+|+||||+|+||.+++++|+++|++|++++|+.++...      .....+++++++|++|++++.+++++    +|.|
T Consensus         1 ~~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~d~v   80 (243)
T PRK07102          1 MKKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPALPDIV   80 (243)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhhcCCEE
Confidence            4689999999999999999999999999999998754211      11134789999999999988877654    6999


Q ss_pred             EEccccCCCc----------chhhhhhhHHHHHHHHHHHH----cCCCEEEEEecCCcCCCCccccchHHHHHHHHHHHH
Q 023205          126 ISCVGGFGSN----------SYMYKINGTANINAIRAASE----KGVKRFVYISAADFGVANYLLQGYYEGKRAAETELL  191 (286)
Q Consensus       126 i~~a~~~~~~----------~~~~~~~~~~~~~l~~~a~~----~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~  191 (286)
                      ||++|.....          ...+++|+.++.++++++..    .+.++||++||............|+.+|...+.+..
T Consensus        81 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~  160 (243)
T PRK07102         81 LIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGDRGRASNYVYGSAKAALTAFLS  160 (243)
T ss_pred             EECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccccCCCCCCcccHHHHHHHHHHHH
Confidence            9999864211          13467899998888877654    456799999995322223345679999999888664


Q ss_pred             H------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcC
Q 023205          192 T------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATD  265 (286)
Q Consensus       192 ~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~  265 (286)
                      .      ..|+++++++||.+.++.....                       ..+     ....++++|+|+.+++++.+
T Consensus       161 ~l~~el~~~gi~v~~v~pg~v~t~~~~~~-----------------------~~~-----~~~~~~~~~~a~~i~~~~~~  212 (243)
T PRK07102        161 GLRNRLFKSGVHVLTVKPGFVRTPMTAGL-----------------------KLP-----GPLTAQPEEVAKDIFRAIEK  212 (243)
T ss_pred             HHHHHhhccCcEEEEEecCcccChhhhcc-----------------------CCC-----ccccCCHHHHHHHHHHHHhC
Confidence            3      4689999999999987532110                       001     11247899999999999986


Q ss_pred             CC
Q 023205          266 PV  267 (286)
Q Consensus       266 ~~  267 (286)
                      +.
T Consensus       213 ~~  214 (243)
T PRK07102        213 GK  214 (243)
T ss_pred             CC
Confidence            53

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.83  E-value=3.4e-19  Score=149.64  Aligned_cols=211  Identities=18%  Similarity=0.148  Sum_probs=142.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhc-------CCCEEEEc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD-------GVTAVISC  128 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d~vi~~  128 (286)
                      .++++||||+|+||.++++.|+++|++|+++.|+..+........++.++.+|++|+++++++++       ++|+||||
T Consensus         7 ~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~~   86 (255)
T PRK06463          7 GKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELREKGVFTIKCDVGNRDQVKKSKEVVEKEFGRVDVLVNN   86 (255)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            57899999999999999999999999999887765432222222357899999999998887765       57999999


Q ss_pred             cccCCC----------cchhhhhhhHHHHHHHHH----HHHcCCCEEEEEecC-CcCCCCccccchHHHHHHHHHHHHH-
Q 023205          129 VGGFGS----------NSYMYKINGTANINAIRA----ASEKGVKRFVYISAA-DFGVANYLLQGYYEGKRAAETELLT-  192 (286)
Q Consensus       129 a~~~~~----------~~~~~~~~~~~~~~l~~~----a~~~~v~~~v~~Ss~-~~~~~~~~~~~y~~sK~~~E~~~~~-  192 (286)
                      +|....          ....+++|+.++..+.+.    +++.+..+||++||. .++........|+.+|...+.+.+. 
T Consensus        87 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~~~~~~l  166 (255)
T PRK06463         87 AGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNAGIGTAAEGTTFYAITKAGIIILTRRL  166 (255)
T ss_pred             CCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHhCCCCCCCccHhHHHHHHHHHHHHHH
Confidence            986421          124568899987655444    444555699999994 3333334456799999999987753 


Q ss_pred             -----hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcCCC
Q 023205          193 -----RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDPV  267 (286)
Q Consensus       193 -----~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~~  267 (286)
                           ..|+++++++||++-.+...... .+    .. ...+......  ..+     ...+.+.+|+|++++.++..+.
T Consensus       167 a~e~~~~~i~v~~i~Pg~v~t~~~~~~~-~~----~~-~~~~~~~~~~--~~~-----~~~~~~~~~va~~~~~l~s~~~  233 (255)
T PRK06463        167 AFELGKYGIRVNAVAPGWVETDMTLSGK-SQ----EE-AEKLRELFRN--KTV-----LKTTGKPEDIANIVLFLASDDA  233 (255)
T ss_pred             HHHhhhcCeEEEEEeeCCCCCchhhccc-Cc----cc-hHHHHHHHHh--CCC-----cCCCcCHHHHHHHHHHHcChhh
Confidence                 36899999999988544221100 00    00 0001111100  111     1235789999999999987543


Q ss_pred             --CCCCeeEecccc
Q 023205          268 --FPPGIVDVHGIL  279 (286)
Q Consensus       268 --~~~~~~~l~~~~  279 (286)
                        ..|..+.+.|+.
T Consensus       234 ~~~~G~~~~~dgg~  247 (255)
T PRK06463        234 RYITGQVIVADGGR  247 (255)
T ss_pred             cCCCCCEEEECCCe
Confidence              457888887754

>PRK08265 short chain dehydrogenase; Provisional

Probab=99.83  E-value=6.6e-19  Score=148.46  Aligned_cols=213  Identities=14%  Similarity=0.077  Sum_probs=146.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCccc--ccccCCceeEEeccCCCHhHHHHHhc-------CCCEEE
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSL--RDSWANNVIWHQGNLLSSDSWKEALD-------GVTAVI  126 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~--~~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d~vi  126 (286)
                      .++++||||+|+||++++++|+++|++|++++|+.++..  ......++.++.+|++|.+++.++++       .+|++|
T Consensus         6 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~lv   85 (261)
T PRK08265          6 GKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVARFGRVDILV   85 (261)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHhCCCCEEE
Confidence            579999999999999999999999999999999865321  11223468899999999998877765       479999


Q ss_pred             EccccCCC---------cchhhhhhhHHHHHHHHHHHH---cCCCEEEEEecCCcCCCCccccchHHHHHHHHHHHHH--
Q 023205          127 SCVGGFGS---------NSYMYKINGTANINAIRAASE---KGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLT--  192 (286)
Q Consensus       127 ~~a~~~~~---------~~~~~~~~~~~~~~l~~~a~~---~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~~--  192 (286)
                      ||||....         ....+++|+.++..+++.+..   .+-.+||++||............|+.+|...+.+.+.  
T Consensus        86 ~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la  165 (261)
T PRK08265         86 NLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTSISAKFAQTGRWLYPASKAAIRQLTRSMA  165 (261)
T ss_pred             ECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCCCCchhHHHHHHHHHHHHHHH
Confidence            99986421         124567899988888877653   2335899999953222223456799999999887653  


Q ss_pred             ----hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcCC--
Q 023205          193 ----RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDP--  266 (286)
Q Consensus       193 ----~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~--  266 (286)
                          ..|+++++|+||.+..+......       ............  ...|     ...+...+|+|+++..++..+  
T Consensus       166 ~e~~~~gi~vn~v~PG~~~t~~~~~~~-------~~~~~~~~~~~~--~~~p-----~~r~~~p~dva~~~~~l~s~~~~  231 (261)
T PRK08265        166 MDLAPDGIRVNSVSPGWTWSRVMDELS-------GGDRAKADRVAA--PFHL-----LGRVGDPEEVAQVVAFLCSDAAS  231 (261)
T ss_pred             HHhcccCEEEEEEccCCccChhhhhhc-------ccchhHHHHhhc--ccCC-----CCCccCHHHHHHHHHHHcCcccc
Confidence                35899999999988655321100       000000000000  0111     123568899999999999753  


Q ss_pred             CCCCCeeEeccccccc
Q 023205          267 VFPPGIVDVHGILRYS  282 (286)
Q Consensus       267 ~~~~~~~~l~~~~~~s  282 (286)
                      ...|..+.+.|...+.
T Consensus       232 ~~tG~~i~vdgg~~~~  247 (261)
T PRK08265        232 FVTGADYAVDGGYSAL  247 (261)
T ss_pred             CccCcEEEECCCeecc
Confidence            3467888888775443

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=99.83  E-value=9.9e-19  Score=147.19  Aligned_cols=206  Identities=17%  Similarity=0.170  Sum_probs=144.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc-----cccCCceeEEeccCCCHhHHHHHhc-------CCC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------GVT  123 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~-----~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d  123 (286)
                      .+++|||||+|+||.++++.|+++|++|++++|+.++...     .....++.++.+|++|+++++++++       .+|
T Consensus        12 ~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~~id   91 (259)
T PRK08213         12 GKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERFGHVD   91 (259)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence            5789999999999999999999999999999997643211     1112467889999999998866554       579


Q ss_pred             EEEEccccCCC----------cchhhhhhhHHHHHHHHHHHHc-----CCCEEEEEecCC--cCCCC--ccccchHHHHH
Q 023205          124 AVISCVGGFGS----------NSYMYKINGTANINAIRAASEK-----GVKRFVYISAAD--FGVAN--YLLQGYYEGKR  184 (286)
Q Consensus       124 ~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~~~-----~v~~~v~~Ss~~--~~~~~--~~~~~y~~sK~  184 (286)
                      +|||++|....          ....+++|+.++.++++++.+.     +.++||++||..  ++...  .+...|..+|.
T Consensus        92 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~~~~~~~~~~~Y~~sKa  171 (259)
T PRK08213         92 ILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPPEVMDTIAYNTSKG  171 (259)
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCccccCcchHHHHHH
Confidence            99999986421          1245679999999999987554     567999999942  22221  23478999999


Q ss_pred             HHHHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHH
Q 023205          185 AAETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKV  258 (286)
Q Consensus       185 ~~E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~  258 (286)
                      ..|.+++.      ..|+++++++||.+-.+....           ....+.......  .|.     ..+...+|+|++
T Consensus       172 ~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~~~-----------~~~~~~~~~~~~--~~~-----~~~~~~~~va~~  233 (259)
T PRK08213        172 AVINFTRALAAEWGPHGIRVNAIAPGFFPTKMTRG-----------TLERLGEDLLAH--TPL-----GRLGDDEDLKGA  233 (259)
T ss_pred             HHHHHHHHHHHHhcccCEEEEEEecCcCCCcchhh-----------hhHHHHHHHHhc--CCC-----CCCcCHHHHHHH
Confidence            99987753      358999999999886543211           111111111111  111     123568999999


Q ss_pred             HHHHhcCCC--CCCCeeEecccc
Q 023205          259 AVRAATDPV--FPPGIVDVHGIL  279 (286)
Q Consensus       259 ~~~~l~~~~--~~~~~~~l~~~~  279 (286)
                      +..++....  ..|+.+++.+..
T Consensus       234 ~~~l~~~~~~~~~G~~~~~~~~~  256 (259)
T PRK08213        234 ALLLASDASKHITGQILAVDGGV  256 (259)
T ss_pred             HHHHhCccccCccCCEEEECCCe
Confidence            988886543  457888888754

>PRK08324 short chain dehydrogenase; Validated

Probab=99.83  E-value=2.2e-19  Score=170.04  Aligned_cols=220  Identities=16%  Similarity=0.119  Sum_probs=152.9

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc--cccC--CceeEEeccCCCHhHHHHHhc-------CCC
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSWA--NNVIWHQGNLLSSDSWKEALD-------GVT  123 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~--~~~~--~~~~~i~~Dl~d~~~~~~~~~-------~~d  123 (286)
                      ..++|+||||+|+||+++++.|+++|++|++++|+.+....  ....  .++.++.+|++|.+++.++++       ++|
T Consensus       421 ~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~iD  500 (681)
T PRK08324        421 AGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFGGVD  500 (681)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            45799999999999999999999999999999998754211  1111  378899999999998877764       689


Q ss_pred             EEEEccccCCC----------cchhhhhhhHHHHHHHHHHH----HcCC-CEEEEEecCCcCCCCccccchHHHHHHHHH
Q 023205          124 AVISCVGGFGS----------NSYMYKINGTANINAIRAAS----EKGV-KRFVYISAADFGVANYLLQGYYEGKRAAET  188 (286)
Q Consensus       124 ~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~----~~~v-~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~  188 (286)
                      +||||||....          ....+++|+.++.++++++.    +.+. .+||++||...-........|+.+|...+.
T Consensus       501 vvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~~~~~~~Y~asKaa~~~  580 (681)
T PRK08324        501 IVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNPGPNFGAYGAAKAAELH  580 (681)
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccCCCCCcHHHHHHHHHHHH
Confidence            99999996432          13457899999998877664    3443 689999995332233446789999999999


Q ss_pred             HHHH------hCCCcEEEEeeCeee-cCCCCCccccCccccCchHHHHHHhcccCC---CCCCCCCccCCCccHHHHHHH
Q 023205          189 ELLT------RYPYGGVILRPGFIY-GTRTVGGMKLPLGVIGSPMEMVLQHAKPLS---QLPLVGPLFTPPVNVTVVAKV  258 (286)
Q Consensus       189 ~~~~------~~g~~~~ilRp~~v~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~g~~~~~~i~v~Dva~~  258 (286)
                      +++.      ..|+++++++|+.+| ++......+..        ...........   .....+.....+++++|+|++
T Consensus       581 l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~~~~~~~--------~~~~~~g~~~~~~~~~~~~~~~l~~~v~~~DvA~a  652 (681)
T PRK08324        581 LVRQLALELGPDGIRVNGVNPDAVVRGSGIWTGEWIE--------ARAAAYGLSEEELEEFYRARNLLKREVTPEDVAEA  652 (681)
T ss_pred             HHHHHHHHhcccCeEEEEEeCceeecCCccccchhhh--------hhhhhccCChHHHHHHHHhcCCcCCccCHHHHHHH
Confidence            7753      357999999999998 54321110000        00000000000   000112334578999999999


Q ss_pred             HHHHhc--CCCCCCCeeEeccccccc
Q 023205          259 AVRAAT--DPVFPPGIVDVHGILRYS  282 (286)
Q Consensus       259 ~~~~l~--~~~~~~~~~~l~~~~~~s  282 (286)
                      ++.++.  .....|+++++.|+....
T Consensus       653 ~~~l~s~~~~~~tG~~i~vdgG~~~~  678 (681)
T PRK08324        653 VVFLASGLLSKTTGAIITVDGGNAAA  678 (681)
T ss_pred             HHHHhCccccCCcCCEEEECCCchhc
Confidence            999984  445568899999876543

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=99.83  E-value=3.1e-19  Score=149.01  Aligned_cols=205  Identities=19%  Similarity=0.173  Sum_probs=138.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEE-ecCCCcccc-----cccCCceeEEeccCCCHhHHHHHhcC-------C
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASL-SRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALDG-------V  122 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l-~R~~~~~~~-----~~~~~~~~~i~~Dl~d~~~~~~~~~~-------~  122 (286)
                      |++++||||+|+||++++++|+++|++|+++ .|+.++...     .....++.++++|+.|++++++++++       +
T Consensus         1 ~~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~i   80 (247)
T PRK09730          1 MAIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPL   80 (247)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCCCC
Confidence            3689999999999999999999999999875 454332111     11123588899999999988877653       6


Q ss_pred             CEEEEccccCCC-----------cchhhhhhhHHHHHHHHHHHHc-------CCCEEEEEecCC--cCCCCccccchHHH
Q 023205          123 TAVISCVGGFGS-----------NSYMYKINGTANINAIRAASEK-------GVKRFVYISAAD--FGVANYLLQGYYEG  182 (286)
Q Consensus       123 d~vi~~a~~~~~-----------~~~~~~~~~~~~~~l~~~a~~~-------~v~~~v~~Ss~~--~~~~~~~~~~y~~s  182 (286)
                      |+|||+++....           ....+++|+.++..+++.+...       ...+||++||..  ++.+ .....|+.+
T Consensus        81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~~-~~~~~Y~~s  159 (247)
T PRK09730         81 AALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGAP-GEYVDYAAS  159 (247)
T ss_pred             CEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCCC-CcccchHhH
Confidence            899999986421           1245678888887776665432       124699999952  2222 123469999


Q ss_pred             HHHHHHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHH
Q 023205          183 KRAAETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVA  256 (286)
Q Consensus       183 K~~~E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva  256 (286)
                      |...|.++..      ..+++++++|||.++++......         ....+.....   ..|.     ....+++|+|
T Consensus       160 K~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~~~~---------~~~~~~~~~~---~~~~-----~~~~~~~dva  222 (247)
T PRK09730        160 KGAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHASGG---------EPGRVDRVKS---NIPM-----QRGGQPEEVA  222 (247)
T ss_pred             HHHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcccccCC---------CHHHHHHHHh---cCCC-----CCCcCHHHHH
Confidence            9999986642      36899999999999998542110         0111111111   1121     1124789999


Q ss_pred             HHHHHHhcCCC--CCCCeeEeccc
Q 023205          257 KVAVRAATDPV--FPPGIVDVHGI  278 (286)
Q Consensus       257 ~~~~~~l~~~~--~~~~~~~l~~~  278 (286)
                      ++++.++..+.  ..++.|.+.|.
T Consensus       223 ~~~~~~~~~~~~~~~g~~~~~~g~  246 (247)
T PRK09730        223 QAIVWLLSDKASYVTGSFIDLAGG  246 (247)
T ss_pred             HHHHhhcChhhcCccCcEEecCCC
Confidence            99999887542  45778887764

>PRK08017 oxidoreductase; Provisional

Probab=99.83  E-value=2.8e-19  Score=150.15  Aligned_cols=196  Identities=16%  Similarity=0.013  Sum_probs=135.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhc--------CCCEEEE
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD--------GVTAVIS  127 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~--------~~d~vi~  127 (286)
                      +++|+||||+|+||.++++.|+++|++|+++.|+.++.. .....+++.+.+|+.|.+++..+++        .+|.++|
T Consensus         2 ~k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~-~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ii~   80 (256)
T PRK08017          2 QKSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVA-RMNSLGFTGILLDLDDPESVERAADEVIALTDNRLYGLFN   80 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhH-HHHhCCCeEEEeecCCHHHHHHHHHHHHHhcCCCCeEEEE
Confidence            468999999999999999999999999999999865422 1112357889999999887765543        4689999


Q ss_pred             ccccCCC----------cchhhhhhhHHHHHH----HHHHHHcCCCEEEEEecCCcCCCCccccchHHHHHHHHHHHH--
Q 023205          128 CVGGFGS----------NSYMYKINGTANINA----IRAASEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELL--  191 (286)
Q Consensus       128 ~a~~~~~----------~~~~~~~~~~~~~~l----~~~a~~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~--  191 (286)
                      ++|....          ....++.|+.++.++    ++.+++.+.+++|++||............|+.+|...|.+..  
T Consensus        81 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~~~~~~~~~l  160 (256)
T PRK08017         81 NAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEGRIVMTSSVMGLISTPGRGAYAASKYALEAWSDAL  160 (256)
T ss_pred             CCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCEEEEEcCcccccCCCCccHHHHHHHHHHHHHHHH
Confidence            9985421          124567888887765    566666777899999995322333456789999999998653  


Q ss_pred             ----HhCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcCCC
Q 023205          192 ----TRYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDPV  267 (286)
Q Consensus       192 ----~~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~~  267 (286)
                          ...+++++++|||.+..+.....               ... ....+....+.....+++++|+++++..++++++
T Consensus       161 ~~~~~~~~i~v~~v~pg~~~t~~~~~~---------------~~~-~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~~  224 (256)
T PRK08017        161 RMELRHSGIKVSLIEPGPIRTRFTDNV---------------NQT-QSDKPVENPGIAARFTLGPEAVVPKLRHALESPK  224 (256)
T ss_pred             HHHHhhcCCEEEEEeCCCcccchhhcc---------------cch-hhccchhhhHHHhhcCCCHHHHHHHHHHHHhCCC
Confidence                24689999999988754321100               000 0000000111122457999999999999998776


Q ss_pred             C
Q 023205          268 F  268 (286)
Q Consensus       268 ~  268 (286)
                      .
T Consensus       225 ~  225 (256)
T PRK08017        225 P  225 (256)
T ss_pred             C
Confidence            4

>PRK12742 oxidoreductase; Provisional

Probab=99.83  E-value=8.4e-19  Score=145.56  Aligned_cols=205  Identities=17%  Similarity=0.141  Sum_probs=142.5

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccc-cCCceeEEeccCCCHhHHHHHhc---CCCEEEEccc
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDS-WANNVIWHQGNLLSSDSWKEALD---GVTAVISCVG  130 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~-~~~~~~~i~~Dl~d~~~~~~~~~---~~d~vi~~a~  130 (286)
                      +.++|+||||+|+||+++++.|+++|++|+++.|+..+...+. ...++.++.+|++|.+.+.+.++   .+|++||++|
T Consensus         5 ~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~li~~ag   84 (237)
T PRK12742          5 TGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQETGATAVQTDSADRDAVIDVVRKSGALDILVVNAG   84 (237)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHhCCeEEecCCCCHHHHHHHHHHhCCCcEEEECCC
Confidence            3578999999999999999999999999988876533221111 11246788999999888877665   4899999998


Q ss_pred             cCCC----------cchhhhhhhHHHHHHHHHHHHc--CCCEEEEEecCCc-CCCCccccchHHHHHHHHHHHHH-----
Q 023205          131 GFGS----------NSYMYKINGTANINAIRAASEK--GVKRFVYISAADF-GVANYLLQGYYEGKRAAETELLT-----  192 (286)
Q Consensus       131 ~~~~----------~~~~~~~~~~~~~~l~~~a~~~--~v~~~v~~Ss~~~-~~~~~~~~~y~~sK~~~E~~~~~-----  192 (286)
                      ....          ....+++|+.++..+++.+.+.  ...++|++||... ..+..+...|+.+|...|.+++.     
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~~~  164 (237)
T PRK12742         85 IAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNGDRMPVAGMAAYAASKSALQGMARGLARDF  164 (237)
T ss_pred             CCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEeccccccCCCCCCcchHHhHHHHHHHHHHHHHHH
Confidence            6421          1346788999998887666543  2358999999532 22334567899999999987753     


Q ss_pred             -hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcCCC--CC
Q 023205          193 -RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDPV--FP  269 (286)
Q Consensus       193 -~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~~--~~  269 (286)
                       ..|+++++++||.+..+.....        ....+.+..      ..+.     ..+.+.+|+++++..++....  ..
T Consensus       165 ~~~gi~v~~v~Pg~~~t~~~~~~--------~~~~~~~~~------~~~~-----~~~~~p~~~a~~~~~l~s~~~~~~~  225 (237)
T PRK12742        165 GPRGITINVVQPGPIDTDANPAN--------GPMKDMMHS------FMAI-----KRHGRPEEVAGMVAWLAGPEASFVT  225 (237)
T ss_pred             hhhCeEEEEEecCcccCCccccc--------cHHHHHHHh------cCCC-----CCCCCHHHHHHHHHHHcCcccCccc
Confidence             4689999999999975532110        011111110      1111     235789999999999886543  35


Q ss_pred             CCeeEeccc
Q 023205          270 PGIVDVHGI  278 (286)
Q Consensus       270 ~~~~~l~~~  278 (286)
                      |..+.+.|.
T Consensus       226 G~~~~~dgg  234 (237)
T PRK12742        226 GAMHTIDGA  234 (237)
T ss_pred             CCEEEeCCC
Confidence            778887765

>PRK08251 short chain dehydrogenase; Provisional

Probab=99.83  E-value=7.3e-19  Score=146.96  Aligned_cols=183  Identities=20%  Similarity=0.154  Sum_probs=134.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc------cc-cCCceeEEeccCCCHhHHHHHhc-------C
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DS-WANNVIWHQGNLLSSDSWKEALD-------G  121 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~------~~-~~~~~~~i~~Dl~d~~~~~~~~~-------~  121 (286)
                      +++++||||+|+||.+++++|+++|++|++++|++++...      .. ...++.++.+|++|++++.++++       +
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   81 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGG   81 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            5789999999999999999999999999999998654211      11 12368899999999988776654       5


Q ss_pred             CCEEEEccccCCCc----------chhhhhhhHHHHHHHHHHH----HcCCCEEEEEecCCc-CCCCccccchHHHHHHH
Q 023205          122 VTAVISCVGGFGSN----------SYMYKINGTANINAIRAAS----EKGVKRFVYISAADF-GVANYLLQGYYEGKRAA  186 (286)
Q Consensus       122 ~d~vi~~a~~~~~~----------~~~~~~~~~~~~~l~~~a~----~~~v~~~v~~Ss~~~-~~~~~~~~~y~~sK~~~  186 (286)
                      +|+|||++|.....          ...+++|+.+..++++++.    +.+.++||++||... .....+...|+.+|...
T Consensus        82 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~Y~~sK~a~  161 (248)
T PRK08251         82 LDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSAVRGLPGVKAAYAASKAGV  161 (248)
T ss_pred             CCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccCCCCCcccHHHHHHHH
Confidence            89999999864321          2356789998888877763    456779999999421 11122356899999998


Q ss_pred             HHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHH
Q 023205          187 ETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAV  260 (286)
Q Consensus       187 E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~  260 (286)
                      +.+...      ..++++++++||++.++.....                   .         + ....++.+|.|++++
T Consensus       162 ~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~-------------------~---------~-~~~~~~~~~~a~~i~  212 (248)
T PRK08251        162 ASLGEGLRAELAKTPIKVSTIEPGYIRSEMNAKA-------------------K---------S-TPFMVDTETGVKALV  212 (248)
T ss_pred             HHHHHHHHHHhcccCcEEEEEecCcCcchhhhcc-------------------c---------c-CCccCCHHHHHHHHH
Confidence            876642      3579999999999975532110                   0         0 112478899999999


Q ss_pred             HHhcCCC
Q 023205          261 RAATDPV  267 (286)
Q Consensus       261 ~~l~~~~  267 (286)
                      +++++..
T Consensus       213 ~~~~~~~  219 (248)
T PRK08251        213 KAIEKEP  219 (248)
T ss_pred             HHHhcCC
Confidence            9997643

>PRK07814 short chain dehydrogenase; Provisional

Probab=99.83  E-value=1.3e-18  Score=146.82  Aligned_cols=209  Identities=16%  Similarity=0.079  Sum_probs=145.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc-----cccCCceeEEeccCCCHhHHHHHhc-------CCC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------GVT  123 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~-----~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d  123 (286)
                      .++++||||+|+||.++++.|+++|++|++++|+.++...     .....++.++.+|+++++++.++++       ++|
T Consensus        10 ~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   89 (263)
T PRK07814         10 DQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFGRLD   89 (263)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            5789999999999999999999999999999998654211     1113468899999999998877665       579


Q ss_pred             EEEEccccCCC----------cchhhhhhhHHHHHHHHHHHH-----cCCCEEEEEecCCcCCCCccccchHHHHHHHHH
Q 023205          124 AVISCVGGFGS----------NSYMYKINGTANINAIRAASE-----KGVKRFVYISAADFGVANYLLQGYYEGKRAAET  188 (286)
Q Consensus       124 ~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~~-----~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~  188 (286)
                      +|||+||....          ....+++|+.++.++.+++..     .+..+||++||........+...|+.+|...+.
T Consensus        90 ~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  169 (263)
T PRK07814         90 IVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRLAGRGFAAYGTAKAALAH  169 (263)
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccCCCCCCchhHHHHHHHHH
Confidence            99999986321          124568999999999998864     345689999995322234456789999999998


Q ss_pred             HHHH-----hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHh
Q 023205          189 ELLT-----RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAA  263 (286)
Q Consensus       189 ~~~~-----~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l  263 (286)
                      +++.     ...++++.++||.+..+.....        ... ..+......  ..+     ...+...+|+|++++.++
T Consensus       170 ~~~~~~~e~~~~i~v~~i~Pg~v~t~~~~~~--------~~~-~~~~~~~~~--~~~-----~~~~~~~~~va~~~~~l~  233 (263)
T PRK07814        170 YTRLAALDLCPRIRVNAIAPGSILTSALEVV--------AAN-DELRAPMEK--ATP-----LRRLGDPEDIAAAAVYLA  233 (263)
T ss_pred             HHHHHHHHHCCCceEEEEEeCCCcCchhhhc--------cCC-HHHHHHHHh--cCC-----CCCCcCHHHHHHHHHHHc
Confidence            7753     2358999999998865422100        000 001111110  111     123468899999999998


Q ss_pred             cCC--CCCCCeeEeccccc
Q 023205          264 TDP--VFPPGIVDVHGILR  280 (286)
Q Consensus       264 ~~~--~~~~~~~~l~~~~~  280 (286)
                      ...  ...++.+.+.+...
T Consensus       234 ~~~~~~~~g~~~~~~~~~~  252 (263)
T PRK07814        234 SPAGSYLTGKTLEVDGGLT  252 (263)
T ss_pred             CccccCcCCCEEEECCCcc
Confidence            753  24577888876543

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.83  E-value=1.1e-18  Score=145.57  Aligned_cols=207  Identities=16%  Similarity=0.074  Sum_probs=144.4

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEE-ecCCCcccc-----cccCCceeEEeccCCCHhHHHHHhc-------C
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASL-SRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------G  121 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l-~R~~~~~~~-----~~~~~~~~~i~~Dl~d~~~~~~~~~-------~  121 (286)
                      ++++++||||+|+||.++++.|+++|++|+++ .|+.++...     .....++.++.+|++|++++.++++       +
T Consensus         4 ~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   83 (247)
T PRK05565          4 MGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKFGK   83 (247)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            45799999999999999999999999999998 887543211     1113468899999999998877765       6


Q ss_pred             CCEEEEccccCCC----------cchhhhhhhHHHHHHHHHHHH----cCCCEEEEEecCCcCCCCccccchHHHHHHHH
Q 023205          122 VTAVISCVGGFGS----------NSYMYKINGTANINAIRAASE----KGVKRFVYISAADFGVANYLLQGYYEGKRAAE  187 (286)
Q Consensus       122 ~d~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~~----~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E  187 (286)
                      +|+|||++|....          ....+++|+.+..++++.+..    .+.++||++||............|+.+|...+
T Consensus        84 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~~~~~y~~sK~a~~  163 (247)
T PRK05565         84 IDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLIGASCEVLYSASKGAVN  163 (247)
T ss_pred             CCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhccCCCCccHHHHHHHHHH
Confidence            8999999987521          124567889998888777654    44568999999532222234557999998887


Q ss_pred             HHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHH
Q 023205          188 TELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVR  261 (286)
Q Consensus       188 ~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~  261 (286)
                      .++..      ..|++++++|||.+..+......        .  ........   ..+     ...+...+|++++++.
T Consensus       164 ~~~~~~~~~~~~~gi~~~~v~pg~v~t~~~~~~~--------~--~~~~~~~~---~~~-----~~~~~~~~~va~~~~~  225 (247)
T PRK05565        164 AFTKALAKELAPSGIRVNAVAPGAIDTEMWSSFS--------E--EDKEGLAE---EIP-----LGRLGKPEEIAKVVLF  225 (247)
T ss_pred             HHHHHHHHHHHHcCeEEEEEEECCccCccccccC--------h--HHHHHHHh---cCC-----CCCCCCHHHHHHHHHH
Confidence            76542      46899999999998654332110        0  00000000   011     1235688999999999


Q ss_pred             HhcCCC--CCCCeeEecccc
Q 023205          262 AATDPV--FPPGIVDVHGIL  279 (286)
Q Consensus       262 ~l~~~~--~~~~~~~l~~~~  279 (286)
                      ++....  ..++.+++.+..
T Consensus       226 l~~~~~~~~~g~~~~~~~~~  245 (247)
T PRK05565        226 LASDDASYITGQIITVDGGW  245 (247)
T ss_pred             HcCCccCCccCcEEEecCCc
Confidence            996543  457888887763

>PRK07063 short chain dehydrogenase; Provisional

Probab=99.82  E-value=6e-19  Score=148.60  Aligned_cols=215  Identities=16%  Similarity=0.062  Sum_probs=147.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc---cc----cCCceeEEeccCCCHhHHHHHhc-------C
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR---DS----WANNVIWHQGNLLSSDSWKEALD-------G  121 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~---~~----~~~~~~~i~~Dl~d~~~~~~~~~-------~  121 (286)
                      .++++||||+|+||.++++.|+++|++|++++|+.++...   +.    ...++.++.+|++|++++.++++       .
T Consensus         7 ~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~   86 (260)
T PRK07063          7 GKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAFGP   86 (260)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            5789999999999999999999999999999997654211   11    23468899999999988887765       5


Q ss_pred             CCEEEEccccCCC----------cchhhhhhhHHHHHHHHHHHH----cCCCEEEEEecCCcCCCCccccchHHHHHHHH
Q 023205          122 VTAVISCVGGFGS----------NSYMYKINGTANINAIRAASE----KGVKRFVYISAADFGVANYLLQGYYEGKRAAE  187 (286)
Q Consensus       122 ~d~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~~----~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E  187 (286)
                      +|++|||||....          ....+++|+.++..+++++..    .+..+||++||............|+.+|...+
T Consensus        87 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaa~~  166 (260)
T PRK07063         87 LDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAFKIIPGCFPYPVAKHGLL  166 (260)
T ss_pred             CcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhccCCCCchHHHHHHHHHH
Confidence            8999999986421          124567899998888887643    44568999999532223334567999999999


Q ss_pred             HHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHH
Q 023205          188 TELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVR  261 (286)
Q Consensus       188 ~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~  261 (286)
                      .+.+.      ..|++++.|+||.+-.+.....+..    ............   ...|.     ..+...+|+|++++.
T Consensus       167 ~~~~~la~el~~~gIrvn~v~PG~v~t~~~~~~~~~----~~~~~~~~~~~~---~~~~~-----~r~~~~~~va~~~~f  234 (260)
T PRK07063        167 GLTRALGIEYAARNVRVNAIAPGYIETQLTEDWWNA----QPDPAAARAETL---ALQPM-----KRIGRPEEVAMTAVF  234 (260)
T ss_pred             HHHHHHHHHhCccCeEEEEEeeCCccChhhhhhhhc----cCChHHHHHHHH---hcCCC-----CCCCCHHHHHHHHHH
Confidence            87753      3589999999999865432110000    000000000100   11121     235688999999999


Q ss_pred             HhcCCC--CCCCeeEeccccccc
Q 023205          262 AATDPV--FPPGIVDVHGILRYS  282 (286)
Q Consensus       262 ~l~~~~--~~~~~~~l~~~~~~s  282 (286)
                      ++.++.  ..|+.+.+.|+..+.
T Consensus       235 l~s~~~~~itG~~i~vdgg~~~~  257 (260)
T PRK07063        235 LASDEAPFINATCITIDGGRSVL  257 (260)
T ss_pred             HcCccccccCCcEEEECCCeeee
Confidence            987543  467888888876543

>PRK07041 short chain dehydrogenase; Provisional

Probab=99.82  E-value=5.3e-19  Score=146.16  Aligned_cols=208  Identities=16%  Similarity=0.021  Sum_probs=146.6

Q ss_pred             EEEcCCChhHHHHHHHHHHCCCeEEEEecCCCccccc---c-cCCceeEEeccCCCHhHHHHHhcC---CCEEEEccccC
Q 023205           60 LVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRD---S-WANNVIWHQGNLLSSDSWKEALDG---VTAVISCVGGF  132 (286)
Q Consensus        60 lVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~---~-~~~~~~~i~~Dl~d~~~~~~~~~~---~d~vi~~a~~~  132 (286)
                      +||||+|++|++++++|+++|++|++++|+.++....   . ...+++++.+|++|++++.++++.   +|++||++|..
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~id~li~~ag~~   80 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGGGAPVRTAALDITDEAAVDAFFAEAGPFDHVVITAADT   80 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHhcCCCCEEEECCCCC
Confidence            6999999999999999999999999999985442110   0 134688999999999999988864   79999999864


Q ss_pred             CC----------cchhhhhhhHHHHHHHHHHHHcCCCEEEEEecCCcCCCCccccchHHHHHHHHHHHHH----hCCCcE
Q 023205          133 GS----------NSYMYKINGTANINAIRAASEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLT----RYPYGG  198 (286)
Q Consensus       133 ~~----------~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~~----~~g~~~  198 (286)
                      ..          ....+++|+.+..++.++....+..+||++||........+...|+.+|...+.+.+.    ..++++
T Consensus        81 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~irv  160 (230)
T PRK07041         81 PGGPVRALPLAAAQAAMDSKFWGAYRVARAARIAPGGSLTFVSGFAAVRPSASGVLQGAINAALEALARGLALELAPVRV  160 (230)
T ss_pred             CCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhhcCCeEEEEECchhhcCCCCcchHHHHHHHHHHHHHHHHHHHhhCceE
Confidence            21          1345678999999998866555667999999954333344567899999999987754    245889


Q ss_pred             EEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcCCCCCCCeeEeccc
Q 023205          199 VILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDPVFPPGIVDVHGI  278 (286)
Q Consensus       199 ~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~l~~~  278 (286)
                      ++++||.+-.+.....   +    ......+.....  ..++.     ......+|+|++++.++.++...++.|++.|+
T Consensus       161 ~~i~pg~~~t~~~~~~---~----~~~~~~~~~~~~--~~~~~-----~~~~~~~dva~~~~~l~~~~~~~G~~~~v~gg  226 (230)
T PRK07041        161 NTVSPGLVDTPLWSKL---A----GDAREAMFAAAA--ERLPA-----RRVGQPEDVANAILFLAANGFTTGSTVLVDGG  226 (230)
T ss_pred             EEEeecccccHHHHhh---h----ccchHHHHHHHH--hcCCC-----CCCcCHHHHHHHHHHHhcCCCcCCcEEEeCCC
Confidence            9999998855431100   0    000011111111  11121     12357799999999999877666899999987


Q ss_pred             ccc
Q 023205          279 LRY  281 (286)
Q Consensus       279 ~~~  281 (286)
                      +.+
T Consensus       227 ~~~  229 (230)
T PRK07041        227 HAI  229 (230)
T ss_pred             eec
Confidence            653

>PRK07478 short chain dehydrogenase; Provisional

Probab=99.82  E-value=2.1e-18  Score=144.81  Aligned_cols=210  Identities=14%  Similarity=0.075  Sum_probs=145.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc-----cccCCceeEEeccCCCHhHHHHHhc-------CCC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------GVT  123 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~-----~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d  123 (286)
                      .++++||||+|+||.+++++|+++|++|++++|++++...     .....++.++.+|++|+++++++++       .+|
T Consensus         6 ~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   85 (254)
T PRK07478          6 GKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFGGLD   85 (254)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCCC
Confidence            4789999999999999999999999999999998654211     1112468889999999998887765       579


Q ss_pred             EEEEccccCCC-----------cchhhhhhhHHHHHHHHHH----HHcCCCEEEEEecCC-cCCCCccccchHHHHHHHH
Q 023205          124 AVISCVGGFGS-----------NSYMYKINGTANINAIRAA----SEKGVKRFVYISAAD-FGVANYLLQGYYEGKRAAE  187 (286)
Q Consensus       124 ~vi~~a~~~~~-----------~~~~~~~~~~~~~~l~~~a----~~~~v~~~v~~Ss~~-~~~~~~~~~~y~~sK~~~E  187 (286)
                      ++|||||....           ....+++|+.+...+++++    ++.+..+||++||.. +.........|+.+|...+
T Consensus        86 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~~Y~~sK~a~~  165 (254)
T PRK07478         86 IAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTSTFVGHTAGFPGMAAYAASKAGLI  165 (254)
T ss_pred             EEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEechHhhccCCCCcchhHHHHHHHH
Confidence            99999986421           1345688888877665544    445556899999952 2233345678999999999


Q ss_pred             HHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHH
Q 023205          188 TELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVR  261 (286)
Q Consensus       188 ~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~  261 (286)
                      .+.+.      ..|+++++++||.+-.+.....        ..... ........  .|     ...+...+|+|++++.
T Consensus       166 ~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~--------~~~~~-~~~~~~~~--~~-----~~~~~~~~~va~~~~~  229 (254)
T PRK07478        166 GLTQVLAAEYGAQGIRVNALLPGGTDTPMGRAM--------GDTPE-ALAFVAGL--HA-----LKRMAQPEEIAQAALF  229 (254)
T ss_pred             HHHHHHHHHHhhcCEEEEEEeeCcccCcccccc--------cCCHH-HHHHHHhc--CC-----CCCCcCHHHHHHHHHH
Confidence            86653      3579999999999965522110        00000 01111111  11     1235689999999999


Q ss_pred             HhcCCC--CCCCeeEecccccc
Q 023205          262 AATDPV--FPPGIVDVHGILRY  281 (286)
Q Consensus       262 ~l~~~~--~~~~~~~l~~~~~~  281 (286)
                      ++.++.  ..|+++.+.|+..+
T Consensus       230 l~s~~~~~~~G~~~~~dgg~~~  251 (254)
T PRK07478        230 LASDAASFVTGTALLVDGGVSI  251 (254)
T ss_pred             HcCchhcCCCCCeEEeCCchhc
Confidence            987543  45788888876543

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=99.82  E-value=1.3e-18  Score=144.57  Aligned_cols=202  Identities=18%  Similarity=0.119  Sum_probs=140.4

Q ss_pred             EEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc------cccCCceeEEeccCCCHhHHHHHhcC-------CCEE
Q 023205           59 LLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALDG-------VTAV  125 (286)
Q Consensus        59 VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~------~~~~~~~~~i~~Dl~d~~~~~~~~~~-------~d~v  125 (286)
                      |+|||++|+||.++++.|+++|++|++++|+..+...      .....++.++.+|++|.+++++++.+       +|+|
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   80 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDIL   80 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            5899999999999999999999999999997632111      11123578999999999988877653       6999


Q ss_pred             EEccccCCC----------cchhhhhhhHHHHHHHHHHHH----cCCCEEEEEecCCcCCCCccccchHHHHHHHHHHHH
Q 023205          126 ISCVGGFGS----------NSYMYKINGTANINAIRAASE----KGVKRFVYISAADFGVANYLLQGYYEGKRAAETELL  191 (286)
Q Consensus       126 i~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~~----~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~  191 (286)
                      ||++|....          ....++.|+.++.++++.+..    .+.++|+++||...-........|+.+|...+.++.
T Consensus        81 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~g~~~~~~y~~~k~a~~~~~~  160 (239)
T TIGR01830        81 VNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLMGNAGQANYAASKAGVIGFTK  160 (239)
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCCCCchhHHHHHHHHHHHH
Confidence            999997532          124567888999888888764    455699999994211112345679999998887654


Q ss_pred             H------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcC
Q 023205          192 T------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATD  265 (286)
Q Consensus       192 ~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~  265 (286)
                      .      ..|+.+++++||.+.++.....        ...   +.....  ..++     ...+.+++|+|++++.++..
T Consensus       161 ~l~~~~~~~g~~~~~i~pg~~~~~~~~~~--------~~~---~~~~~~--~~~~-----~~~~~~~~~~a~~~~~~~~~  222 (239)
T TIGR01830       161 SLAKELASRNITVNAVAPGFIDTDMTDKL--------SEK---VKKKIL--SQIP-----LGRFGTPEEVANAVAFLASD  222 (239)
T ss_pred             HHHHHHhhcCeEEEEEEECCCCChhhhhc--------ChH---HHHHHH--hcCC-----cCCCcCHHHHHHHHHHHhCc
Confidence            2      3689999999998865432110        110   111111  1112     12356899999999998854


Q ss_pred             C--CCCCCeeEeccc
Q 023205          266 P--VFPPGIVDVHGI  278 (286)
Q Consensus       266 ~--~~~~~~~~l~~~  278 (286)
                      +  ...+++|++.+.
T Consensus       223 ~~~~~~g~~~~~~~g  237 (239)
T TIGR01830       223 EASYITGQVIHVDGG  237 (239)
T ss_pred             ccCCcCCCEEEeCCC
Confidence            3  346789998654

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK12744 short chain dehydrogenase; Provisional

Probab=99.82  E-value=1.1e-18  Score=146.79  Aligned_cols=214  Identities=14%  Similarity=0.130  Sum_probs=143.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc---------cccCCceeEEeccCCCHhHHHHHhc------
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR---------DSWANNVIWHQGNLLSSDSWKEALD------  120 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~---------~~~~~~~~~i~~Dl~d~~~~~~~~~------  120 (286)
                      .++++||||+|+||.++++.|+++|++|+++.++......         .....++.++++|++|+++++++++      
T Consensus         8 ~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (257)
T PRK12744          8 GKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKAAF   87 (257)
T ss_pred             CcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHHhh
Confidence            4789999999999999999999999998888765432111         0112468889999999998887765      


Q ss_pred             -CCCEEEEccccCC----------CcchhhhhhhHHHHHHHHHHHHcC--CCEEEEEecCCcCCCCccccchHHHHHHHH
Q 023205          121 -GVTAVISCVGGFG----------SNSYMYKINGTANINAIRAASEKG--VKRFVYISAADFGVANYLLQGYYEGKRAAE  187 (286)
Q Consensus       121 -~~d~vi~~a~~~~----------~~~~~~~~~~~~~~~l~~~a~~~~--v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E  187 (286)
                       .+|++||+||...          .....+++|+.++..+++++...-  ..++++++|+..+........|+.+|...|
T Consensus        88 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~~~ss~~~~~~~~~~~Y~~sK~a~~  167 (257)
T PRK12744         88 GRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNGKIVTLVTSLLGAFTPFYSAYAGSKAPVE  167 (257)
T ss_pred             CCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCEEEEecchhcccCCCcccchhhHHHHH
Confidence             5799999998632          112456789999998888886531  235666643322223344568999999999


Q ss_pred             HHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHH
Q 023205          188 TELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVR  261 (286)
Q Consensus       188 ~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~  261 (286)
                      .+.+.      ..|+++++++||.+.++...+.. .+     .... .......  ..+.   ....+.+++|+|+++..
T Consensus       168 ~~~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~-~~-----~~~~-~~~~~~~--~~~~---~~~~~~~~~dva~~~~~  235 (257)
T PRK12744        168 HFTRAASKEFGARGISVTAVGPGPMDTPFFYPQE-GA-----EAVA-YHKTAAA--LSPF---SKTGLTDIEDIVPFIRF  235 (257)
T ss_pred             HHHHHHHHHhCcCceEEEEEecCccccchhcccc-cc-----chhh-ccccccc--cccc---ccCCCCCHHHHHHHHHH
Confidence            97753      24799999999999765322110 00     0000 0000000  0111   11247889999999999


Q ss_pred             HhcCCC-CCCCeeEecccccc
Q 023205          262 AATDPV-FPPGIVDVHGILRY  281 (286)
Q Consensus       262 ~l~~~~-~~~~~~~l~~~~~~  281 (286)
                      ++.... ..|+++++.++..+
T Consensus       236 l~~~~~~~~g~~~~~~gg~~~  256 (257)
T PRK12744        236 LVTDGWWITGQTILINGGYTT  256 (257)
T ss_pred             hhcccceeecceEeecCCccC
Confidence            998533 25789999876543

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=99.82  E-value=2e-18  Score=143.95  Aligned_cols=206  Identities=18%  Similarity=0.124  Sum_probs=141.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc--cccCCceeEEeccCCCHhHHHHHhc-------CCCEEE
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSWANNVIWHQGNLLSSDSWKEALD-------GVTAVI  126 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~--~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d~vi  126 (286)
                      +++++||||+|+||+++++.|+++|+.|++..|+.++...  .....+++++.+|++|.++++++++       ++|+||
T Consensus         6 ~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi   85 (245)
T PRK12936          6 GRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEGVDILV   85 (245)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            5799999999999999999999999999888887544211  1123468899999999988877653       589999


Q ss_pred             EccccCCC----------cchhhhhhhHHHHHHHHHHHH----cCCCEEEEEecCCcCCCCccccchHHHHHHHHHHHHH
Q 023205          127 SCVGGFGS----------NSYMYKINGTANINAIRAASE----KGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLT  192 (286)
Q Consensus       127 ~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~~----~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~~  192 (286)
                      ||+|....          ....+++|+.+..++++++.+    .+.++||++||............|+.+|...+.+++.
T Consensus        86 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sk~a~~~~~~~  165 (245)
T PRK12936         86 NNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGVTGNPGQANYCASKAGMIGFSKS  165 (245)
T ss_pred             ECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhCcCCCCCcchHHHHHHHHHHHHH
Confidence            99986421          134568899998888777642    4567899999942111223345799999977765542


Q ss_pred             ------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcCC
Q 023205          193 ------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDP  266 (286)
Q Consensus       193 ------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~  266 (286)
                            ..++++++++||.+..+.....           .+.......  ...+     ...+.+.+|+++++..++..+
T Consensus       166 la~~~~~~~i~v~~i~pg~~~t~~~~~~-----------~~~~~~~~~--~~~~-----~~~~~~~~~ia~~~~~l~~~~  227 (245)
T PRK12936        166 LAQEIATRNVTVNCVAPGFIESAMTGKL-----------NDKQKEAIM--GAIP-----MKRMGTGAEVASAVAYLASSE  227 (245)
T ss_pred             HHHHhhHhCeEEEEEEECcCcCchhccc-----------ChHHHHHHh--cCCC-----CCCCcCHHHHHHHHHHHcCcc
Confidence                  3589999999998754422110           000000000  1111     123567999999999888654


Q ss_pred             C--CCCCeeEecccc
Q 023205          267 V--FPPGIVDVHGIL  279 (286)
Q Consensus       267 ~--~~~~~~~l~~~~  279 (286)
                      .  ..|+++++.+..
T Consensus       228 ~~~~~G~~~~~~~g~  242 (245)
T PRK12936        228 AAYVTGQTIHVNGGM  242 (245)
T ss_pred             ccCcCCCEEEECCCc
Confidence            3  357899988764

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=99.82  E-value=1.9e-18  Score=145.03  Aligned_cols=209  Identities=12%  Similarity=0.066  Sum_probs=147.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc---c--ccCCceeEEeccCCCHhHHHHHhc-------CCC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR---D--SWANNVIWHQGNLLSSDSWKEALD-------GVT  123 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~---~--~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d  123 (286)
                      .+++|||||+|+||.+++++|+++|++|++++|+.++...   +  ....++.++.+|++|.+++.++++       .+|
T Consensus         9 ~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   88 (254)
T PRK08085          9 GKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGPID   88 (254)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcCCCC
Confidence            5789999999999999999999999999999998654211   1  112357788999999998887764       479


Q ss_pred             EEEEccccCCC----------cchhhhhhhHHHHHHHHHHHH----cCCCEEEEEecCCcCCCCccccchHHHHHHHHHH
Q 023205          124 AVISCVGGFGS----------NSYMYKINGTANINAIRAASE----KGVKRFVYISAADFGVANYLLQGYYEGKRAAETE  189 (286)
Q Consensus       124 ~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~~----~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~  189 (286)
                      +|||++|....          ....+++|+.++..+++.+.+    .+..+||++||............|+.+|...|.+
T Consensus        89 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~  168 (254)
T PRK08085         89 VLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSELGRDTITPYAASKGAVKML  168 (254)
T ss_pred             EEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhccCCCCCcchHHHHHHHHHH
Confidence            99999986421          124678899998888777654    3456899999953222334456899999999987


Q ss_pred             HHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHh
Q 023205          190 LLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAA  263 (286)
Q Consensus       190 ~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l  263 (286)
                      ++.      ..|+++++++||++..+......       ..  +.+.....  ...|.     ..+...+|+|+++..++
T Consensus       169 ~~~la~e~~~~gi~v~~v~pG~~~t~~~~~~~-------~~--~~~~~~~~--~~~p~-----~~~~~~~~va~~~~~l~  232 (254)
T PRK08085        169 TRGMCVELARHNIQVNGIAPGYFKTEMTKALV-------ED--EAFTAWLC--KRTPA-----ARWGDPQELIGAAVFLS  232 (254)
T ss_pred             HHHHHHHHHhhCeEEEEEEeCCCCCcchhhhc-------cC--HHHHHHHH--hcCCC-----CCCcCHHHHHHHHHHHh
Confidence            753      46899999999999876432110       00  01111111  11221     24678999999999988


Q ss_pred             cCC--CCCCCeeEeccccc
Q 023205          264 TDP--VFPPGIVDVHGILR  280 (286)
Q Consensus       264 ~~~--~~~~~~~~l~~~~~  280 (286)
                      ...  ...|.++.+.|+..
T Consensus       233 ~~~~~~i~G~~i~~dgg~~  251 (254)
T PRK08085        233 SKASDFVNGHLLFVDGGML  251 (254)
T ss_pred             CccccCCcCCEEEECCCee
Confidence            743  34577888877643

>PRK07023 short chain dehydrogenase; Provisional

Probab=99.82  E-value=6.5e-19  Score=146.90  Aligned_cols=154  Identities=18%  Similarity=0.160  Sum_probs=116.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhc-----------CCCE
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD-----------GVTA  124 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~-----------~~d~  124 (286)
                      ||+++||||+|+||++++++|+++|++|++++|+..+........++.++++|+.|.+++++++.           ..|+
T Consensus         1 ~~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (243)
T PRK07023          1 AVRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPSLAAAAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGASRVL   80 (243)
T ss_pred             CceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchhhhhccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCCCceE
Confidence            45899999999999999999999999999999986543322223468899999999998887442           3689


Q ss_pred             EEEccccCCC-----------cchhhhhhhHHHHHHHHHHH----HcCCCEEEEEecCCcCCCCccccchHHHHHHHHHH
Q 023205          125 VISCVGGFGS-----------NSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEGKRAAETE  189 (286)
Q Consensus       125 vi~~a~~~~~-----------~~~~~~~~~~~~~~l~~~a~----~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~  189 (286)
                      +|||+|....           ....+++|+.+...+.+.+.    +.+.++||++||........+...|+.+|...|.+
T Consensus        81 ~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (243)
T PRK07023         81 LINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAARNAYAGWSVYCATKAALDHH  160 (243)
T ss_pred             EEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhcCCCCCchHHHHHHHHHHHH
Confidence            9999986431           13456788888766655544    34456999999954333344567899999999997


Q ss_pred             HHH-----hCCCcEEEEeeCeeecC
Q 023205          190 LLT-----RYPYGGVILRPGFIYGT  209 (286)
Q Consensus       190 ~~~-----~~g~~~~ilRp~~v~g~  209 (286)
                      ++.     ..++++++++||.+-.+
T Consensus       161 ~~~~~~~~~~~i~v~~v~pg~~~t~  185 (243)
T PRK07023        161 ARAVALDANRALRIVSLAPGVVDTG  185 (243)
T ss_pred             HHHHHhcCCCCcEEEEecCCccccH
Confidence            763     35899999999988543

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=99.82  E-value=2.4e-18  Score=146.33  Aligned_cols=212  Identities=15%  Similarity=0.160  Sum_probs=144.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc---c--ccCCceeEEeccCCCHhHHHHHhc-------CCC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR---D--SWANNVIWHQGNLLSSDSWKEALD-------GVT  123 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~---~--~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d  123 (286)
                      .++++||||+|+||++++++|+++|++|++++|+.+....   +  ....++.++++|+.|.+++..+++       .+|
T Consensus        10 ~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id   89 (278)
T PRK08277         10 GKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFGPCD   89 (278)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            5789999999999999999999999999999998643211   1  112367889999999988877654       689


Q ss_pred             EEEEccccCCC-------------------------cchhhhhhhHHHHHHHHHH----HHcCCCEEEEEecCCcCCCCc
Q 023205          124 AVISCVGGFGS-------------------------NSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANY  174 (286)
Q Consensus       124 ~vi~~a~~~~~-------------------------~~~~~~~~~~~~~~l~~~a----~~~~v~~~v~~Ss~~~~~~~~  174 (286)
                      ++|||||....                         ....+++|+.+...+++.+    ++.+..+||++||........
T Consensus        90 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~  169 (278)
T PRK08277         90 ILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISSMNAFTPLT  169 (278)
T ss_pred             EEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhcCCCC
Confidence            99999985321                         1234577888887665554    344556899999953333334


Q ss_pred             cccchHHHHHHHHHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCC
Q 023205          175 LLQGYYEGKRAAETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTP  248 (286)
Q Consensus       175 ~~~~y~~sK~~~E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  248 (286)
                      ....|+.+|...+.+++.      ..|+++++++||.+..+..........   +...+......   ...|     ...
T Consensus       170 ~~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~---~~~~~~~~~~~---~~~p-----~~r  238 (278)
T PRK08277        170 KVPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQNRALLFNED---GSLTERANKIL---AHTP-----MGR  238 (278)
T ss_pred             CCchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcchhhhhcccc---ccchhHHHHHh---ccCC-----ccC
Confidence            566899999999987653      458999999999998774321110000   00001111110   1112     124


Q ss_pred             CccHHHHHHHHHHHhcC-CC--CCCCeeEeccc
Q 023205          249 PVNVTVVAKVAVRAATD-PV--FPPGIVDVHGI  278 (286)
Q Consensus       249 ~i~v~Dva~~~~~~l~~-~~--~~~~~~~l~~~  278 (286)
                      +...+|+|++++.++.. ..  ..|..+.+.|+
T Consensus       239 ~~~~~dva~~~~~l~s~~~~~~~tG~~i~vdgG  271 (278)
T PRK08277        239 FGKPEELLGTLLWLADEKASSFVTGVVLPVDGG  271 (278)
T ss_pred             CCCHHHHHHHHHHHcCccccCCcCCCEEEECCC
Confidence            67889999999998876 32  45788888776

>PRK06057 short chain dehydrogenase; Provisional

Probab=99.82  E-value=9.3e-19  Score=147.02  Aligned_cols=208  Identities=14%  Similarity=0.082  Sum_probs=141.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhc-------CCCEEEEc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD-------GVTAVISC  128 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d~vi~~  128 (286)
                      +++|+||||+|+||.+++++|+++|++|++++|+..+........+..++++|++|+++++++++       .+|+|||+
T Consensus         7 ~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~   86 (255)
T PRK06057          7 GRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVGGLFVPTDVTDEDAVNALFDTAAETYGSVDIAFNN   86 (255)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCcEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            57999999999999999999999999999999986542111111123688999999998887775       47999999


Q ss_pred             cccCCC------------cchhhhhhhHHHHHHHHHHH----HcCCCEEEEEecCC--cCCCCccccchHHHHHHHHHHH
Q 023205          129 VGGFGS------------NSYMYKINGTANINAIRAAS----EKGVKRFVYISAAD--FGVANYLLQGYYEGKRAAETEL  190 (286)
Q Consensus       129 a~~~~~------------~~~~~~~~~~~~~~l~~~a~----~~~v~~~v~~Ss~~--~~~~~~~~~~y~~sK~~~E~~~  190 (286)
                      +|....            ....+++|+.++..+++.+.    +.+..++|++||..  ++. ......|+.+|...+.+.
T Consensus        87 ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~~~~~g~-~~~~~~Y~~sKaal~~~~  165 (255)
T PRK06057         87 AGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFVAVMGS-ATSQISYTASKGGVLAMS  165 (255)
T ss_pred             CCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcchhhccCC-CCCCcchHHHHHHHHHHH
Confidence            986431            12456788888877666653    34556899999842  332 123457999998776654


Q ss_pred             HH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhc
Q 023205          191 LT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAAT  264 (286)
Q Consensus       191 ~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~  264 (286)
                      ..      ..|+++++++||.+.++.....+.       .......+..   ..+|.     ..+..++|+|+++..++.
T Consensus       166 ~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~-------~~~~~~~~~~---~~~~~-----~~~~~~~~~a~~~~~l~~  230 (255)
T PRK06057        166 RELGVQFARQGIRVNALCPGPVNTPLLQELFA-------KDPERAARRL---VHVPM-----GRFAEPEEIAAAVAFLAS  230 (255)
T ss_pred             HHHHHHHHhhCcEEEEEeeCCcCCchhhhhcc-------CCHHHHHHHH---hcCCC-----CCCcCHHHHHHHHHHHhC
Confidence            42      458999999999998765322110       0011111111   12222     246889999999998886


Q ss_pred             CCC--CCCCeeEecccc
Q 023205          265 DPV--FPPGIVDVHGIL  279 (286)
Q Consensus       265 ~~~--~~~~~~~l~~~~  279 (286)
                      ...  ..+..+.+.+..
T Consensus       231 ~~~~~~~g~~~~~~~g~  247 (255)
T PRK06057        231 DDASFITASTFLVDGGI  247 (255)
T ss_pred             ccccCccCcEEEECCCe
Confidence            533  447788887754

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=99.82  E-value=3.2e-18  Score=143.79  Aligned_cols=209  Identities=16%  Similarity=0.095  Sum_probs=147.8

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc-----cccCCceeEEeccCCCHhHHHHHhc-------CC
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------GV  122 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~-----~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~  122 (286)
                      .+++|+||||+|+||+++++.|+++|++|+++.|+.+....     .....++.++.+|++|++++.++++       .+
T Consensus        10 ~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   89 (256)
T PRK06124         10 AGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEHGRL   89 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence            46799999999999999999999999999999998643111     1123468899999999998887765       36


Q ss_pred             CEEEEccccCCC----------cchhhhhhhHHHHHHHHHHHH----cCCCEEEEEecCCcCCCCccccchHHHHHHHHH
Q 023205          123 TAVISCVGGFGS----------NSYMYKINGTANINAIRAASE----KGVKRFVYISAADFGVANYLLQGYYEGKRAAET  188 (286)
Q Consensus       123 d~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~~----~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~  188 (286)
                      |+|||++|....          ....+++|+.++.++++.+.+    .+..+||++||............|+.+|...+.
T Consensus        90 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~  169 (256)
T PRK06124         90 DILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQVARAGDAVYPAAKQGLTG  169 (256)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechhccCCCCccHhHHHHHHHHH
Confidence            999999986431          123567888888888866643    566799999995322223345679999999988


Q ss_pred             HHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHH
Q 023205          189 ELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRA  262 (286)
Q Consensus       189 ~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~  262 (286)
                      +++.      ..++++++++||.+.++...... .+    ......+..      ..+.     ..+++++|++++++.+
T Consensus       170 ~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~-~~----~~~~~~~~~------~~~~-----~~~~~~~~~a~~~~~l  233 (256)
T PRK06124        170 LMRALAAEFGPHGITSNAIAPGYFATETNAAMA-AD----PAVGPWLAQ------RTPL-----GRWGRPEEIAGAAVFL  233 (256)
T ss_pred             HHHHHHHHHHHhCcEEEEEEECCccCcchhhhc-cC----hHHHHHHHh------cCCC-----CCCCCHHHHHHHHHHH
Confidence            7653      35899999999999877532110 00    011111111      1121     2478999999999999


Q ss_pred             hcCCC--CCCCeeEecccc
Q 023205          263 ATDPV--FPPGIVDVHGIL  279 (286)
Q Consensus       263 l~~~~--~~~~~~~l~~~~  279 (286)
                      +.++.  ..|+.+.+.|..
T Consensus       234 ~~~~~~~~~G~~i~~dgg~  252 (256)
T PRK06124        234 ASPAASYVNGHVLAVDGGY  252 (256)
T ss_pred             cCcccCCcCCCEEEECCCc
Confidence            98653  347788877654

>PRK06114 short chain dehydrogenase; Provisional

Probab=99.82  E-value=1.8e-18  Score=145.17  Aligned_cols=207  Identities=16%  Similarity=0.127  Sum_probs=144.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc------cccCCceeEEeccCCCHhHHHHHhc-------CC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD-------GV  122 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~------~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~  122 (286)
                      .++++||||+|+||++++++|+++|++|++++|+.++...      .....++.++.+|++|++++.++++       .+
T Consensus         8 ~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i   87 (254)
T PRK06114          8 GQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAELGAL   87 (254)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            5789999999999999999999999999999997643211      1113467889999999988887665       36


Q ss_pred             CEEEEccccCCC----------cchhhhhhhHHHHHHHHHHH----HcCCCEEEEEecCC--cCCCCccccchHHHHHHH
Q 023205          123 TAVISCVGGFGS----------NSYMYKINGTANINAIRAAS----EKGVKRFVYISAAD--FGVANYLLQGYYEGKRAA  186 (286)
Q Consensus       123 d~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~----~~~v~~~v~~Ss~~--~~~~~~~~~~y~~sK~~~  186 (286)
                      |++|||||....          ....+++|+.++..+++++.    +.+..+||++||..  .+........|+.+|...
T Consensus        88 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~Y~~sKaa~  167 (254)
T PRK06114         88 TLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGIIVNRGLLQAHYNASKAGV  167 (254)
T ss_pred             CEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCCCCcchHHHHHHHH
Confidence            999999996531          13456789999887766653    34456899999842  222222356799999998


Q ss_pred             HHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHH
Q 023205          187 ETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAV  260 (286)
Q Consensus       187 E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~  260 (286)
                      +.+.+.      ..|+++++++||.+.++.....         ...+.. ....  ...|.     ..+..++|+|++++
T Consensus       168 ~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~~~~---------~~~~~~-~~~~--~~~p~-----~r~~~~~dva~~~~  230 (254)
T PRK06114        168 IHLSKSLAMEWVGRGIRVNSISPGYTATPMNTRP---------EMVHQT-KLFE--EQTPM-----QRMAKVDEMVGPAV  230 (254)
T ss_pred             HHHHHHHHHHHhhcCeEEEEEeecCccCcccccc---------cchHHH-HHHH--hcCCC-----CCCcCHHHHHHHHH
Confidence            886653      4689999999999976643211         001111 1100  11222     23568899999999


Q ss_pred             HHhcCC--CCCCCeeEecccc
Q 023205          261 RAATDP--VFPPGIVDVHGIL  279 (286)
Q Consensus       261 ~~l~~~--~~~~~~~~l~~~~  279 (286)
                      .++.+.  ...|+++.+.|+.
T Consensus       231 ~l~s~~~~~~tG~~i~~dgg~  251 (254)
T PRK06114        231 FLLSDAASFCTGVDLLVDGGF  251 (254)
T ss_pred             HHcCccccCcCCceEEECcCE
Confidence            988653  3457888888764

>PRK06194 hypothetical protein; Provisional

Probab=99.82  E-value=1.5e-18  Score=148.33  Aligned_cols=154  Identities=15%  Similarity=0.090  Sum_probs=114.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc---cc--cCCceeEEeccCCCHhHHHHHhc-------CCC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR---DS--WANNVIWHQGNLLSSDSWKEALD-------GVT  123 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~---~~--~~~~~~~i~~Dl~d~~~~~~~~~-------~~d  123 (286)
                      +++||||||+|+||++++++|+++|++|++++|+.+....   +.  ...++.++.+|++|.++++++++       .+|
T Consensus         6 ~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~id   85 (287)
T PRK06194          6 GKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGAVH   85 (287)
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            5789999999999999999999999999999997543211   11  12367889999999999888776       479


Q ss_pred             EEEEccccCCC----------cchhhhhhhHHHHHHHHHH----HHcCC------CEEEEEecCCcCCCCccccchHHHH
Q 023205          124 AVISCVGGFGS----------NSYMYKINGTANINAIRAA----SEKGV------KRFVYISAADFGVANYLLQGYYEGK  183 (286)
Q Consensus       124 ~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a----~~~~v------~~~v~~Ss~~~~~~~~~~~~y~~sK  183 (286)
                      +||||||....          ....+++|+.++.++++++    .+.+.      .++|++||............|+.+|
T Consensus        86 ~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sK  165 (287)
T PRK06194         86 LLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAPPAMGIYNVSK  165 (287)
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCCCCcchHHHH
Confidence            99999997532          1234679999998877764    33433      4899999953222234456799999


Q ss_pred             HHHHHHHHH--------hCCCcEEEEeeCeeecC
Q 023205          184 RAAETELLT--------RYPYGGVILRPGFIYGT  209 (286)
Q Consensus       184 ~~~E~~~~~--------~~g~~~~ilRp~~v~g~  209 (286)
                      ...|.++..        ..+++++.+.||.+..+
T Consensus       166 ~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~  199 (287)
T PRK06194        166 HAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTG  199 (287)
T ss_pred             HHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCc
Confidence            999987752        23578888888877543

>PRK05650 short chain dehydrogenase; Provisional

Probab=99.82  E-value=8.7e-19  Score=148.47  Aligned_cols=195  Identities=12%  Similarity=0.104  Sum_probs=135.6

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc-----cccCCceeEEeccCCCHhHHHHHhc-------CCCE
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------GVTA  124 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~-----~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d~  124 (286)
                      |+|+||||+|+||++++++|+++|++|++++|+.++...     .....++.++++|+.|++++.++++       ++|+
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~   80 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDV   80 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            479999999999999999999999999999998654211     1123468889999999988877764       5899


Q ss_pred             EEEccccCCCc----------chhhhhhhHHHHHHHHH----HHHcCCCEEEEEecCCcCCCCccccchHHHHHHHHHHH
Q 023205          125 VISCVGGFGSN----------SYMYKINGTANINAIRA----ASEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETEL  190 (286)
Q Consensus       125 vi~~a~~~~~~----------~~~~~~~~~~~~~l~~~----a~~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~  190 (286)
                      ||||+|.....          ...+++|+.+..++.+.    +++.+..+||++||............|+.+|...+.+.
T Consensus        81 lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sKaa~~~~~  160 (270)
T PRK05650         81 IVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAGLMQGPAMSSYNVAKAGVVALS  160 (270)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEECChhhcCCCCCchHHHHHHHHHHHHH
Confidence            99999865321          13457888777766555    45566779999999533333344568999999877655


Q ss_pred             HH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhc
Q 023205          191 LT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAAT  264 (286)
Q Consensus       191 ~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~  264 (286)
                      ..      ..|+++++++||.+..+...... ...   ..........            ....+++++|+|+.++.+++
T Consensus       161 ~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~-~~~---~~~~~~~~~~------------~~~~~~~~~~vA~~i~~~l~  224 (270)
T PRK05650        161 ETLLVELADDEIGVHVVCPSFFQTNLLDSFR-GPN---PAMKAQVGKL------------LEKSPITAADIADYIYQQVA  224 (270)
T ss_pred             HHHHHHhcccCcEEEEEecCccccCcccccc-cCc---hhHHHHHHHH------------hhcCCCCHHHHHHHHHHHHh
Confidence            32      36899999999999876432110 000   0000000000            01235799999999999998


Q ss_pred             CCC
Q 023205          265 DPV  267 (286)
Q Consensus       265 ~~~  267 (286)
                      ++.
T Consensus       225 ~~~  227 (270)
T PRK05650        225 KGE  227 (270)
T ss_pred             CCC
Confidence            643

>PRK05693 short chain dehydrogenase; Provisional

Probab=99.82  E-value=7e-19  Score=149.35  Aligned_cols=154  Identities=15%  Similarity=0.087  Sum_probs=116.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhc-------CCCEEEEc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD-------GVTAVISC  128 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d~vi~~  128 (286)
                      ||+++||||+|+||+++++.|+++|++|++++|+.++.. .....+++++.+|++|.+++.++++       ++|+||||
T Consensus         1 mk~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~   79 (274)
T PRK05693          1 MPVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVE-ALAAAGFTAVQLDVNDGAALARLAEELEAEHGGLDVLINN   79 (274)
T ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEEC
Confidence            468999999999999999999999999999999865421 1112357889999999988877663       57999999


Q ss_pred             cccCCC----------cchhhhhhhHHHHHHHHHHHH---cCCCEEEEEecCCcCCCCccccchHHHHHHHHHHHHH---
Q 023205          129 VGGFGS----------NSYMYKINGTANINAIRAASE---KGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLT---  192 (286)
Q Consensus       129 a~~~~~----------~~~~~~~~~~~~~~l~~~a~~---~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~~---  192 (286)
                      ||....          ....+++|+.++.++++++..   .+..++|++||............|+.+|...+.+...   
T Consensus        80 ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~al~~~~~~l~~  159 (274)
T PRK05693         80 AGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRSRGLVVNIGSVSGVLVTPFAGAYCASKAAVHALSDALRL  159 (274)
T ss_pred             CCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCEEEEECCccccCCCCCccHHHHHHHHHHHHHHHHHH
Confidence            986421          124568999999888887643   2345899999853222233456799999998886542   


Q ss_pred             ---hCCCcEEEEeeCeeecCC
Q 023205          193 ---RYPYGGVILRPGFIYGTR  210 (286)
Q Consensus       193 ---~~g~~~~ilRp~~v~g~~  210 (286)
                         ..|+++++++||.+..+.
T Consensus       160 e~~~~gi~v~~v~pg~v~t~~  180 (274)
T PRK05693        160 ELAPFGVQVMEVQPGAIASQF  180 (274)
T ss_pred             HhhhhCeEEEEEecCcccccc
Confidence               468999999999997653

>PRK07985 oxidoreductase; Provisional

Probab=99.82  E-value=2.1e-18  Score=147.84  Aligned_cols=210  Identities=17%  Similarity=0.087  Sum_probs=146.1

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCccc-c------cccCCceeEEeccCCCHhHHHHHhc-------
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSL-R------DSWANNVIWHQGNLLSSDSWKEALD-------  120 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~-~------~~~~~~~~~i~~Dl~d~~~~~~~~~-------  120 (286)
                      ..++++||||+|+||.+++++|+++|++|++..|+.+... .      .....++.++.+|++|.+++.++++       
T Consensus        48 ~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g  127 (294)
T PRK07985         48 KDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKALG  127 (294)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            3478999999999999999999999999998877543211 1      1112357789999999988776654       


Q ss_pred             CCCEEEEccccCC-----------CcchhhhhhhHHHHHHHHHHHHc--CCCEEEEEecCCcCCCCccccchHHHHHHHH
Q 023205          121 GVTAVISCVGGFG-----------SNSYMYKINGTANINAIRAASEK--GVKRFVYISAADFGVANYLLQGYYEGKRAAE  187 (286)
Q Consensus       121 ~~d~vi~~a~~~~-----------~~~~~~~~~~~~~~~l~~~a~~~--~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E  187 (286)
                      .+|++||+||...           .....+++|+.++.++++++...  .-.+||++||............|+.+|...+
T Consensus       128 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~~~~~~~~~~Y~asKaal~  207 (294)
T PRK07985        128 GLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAYQPSPHLLDYAATKAAIL  207 (294)
T ss_pred             CCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchhccCCCCcchhHHHHHHHH
Confidence            5799999998531           11356789999999999888653  1258999999532222334567999999999


Q ss_pred             HHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHH
Q 023205          188 TELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVR  261 (286)
Q Consensus       188 ~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~  261 (286)
                      .+.+.      ..|+++++++||.+.++...... .+    ....+.+.      ...|.     ..+...+|+|++++.
T Consensus       208 ~l~~~la~el~~~gIrvn~i~PG~v~t~~~~~~~-~~----~~~~~~~~------~~~~~-----~r~~~pedva~~~~f  271 (294)
T PRK07985        208 NYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGG-QT----QDKIPQFG------QQTPM-----KRAGQPAELAPVYVY  271 (294)
T ss_pred             HHHHHHHHHHhHhCcEEEEEECCcCccccccccC-CC----HHHHHHHh------ccCCC-----CCCCCHHHHHHHHHh
Confidence            86643      36899999999999887531110 00    01111111      11221     235688999999999


Q ss_pred             HhcCCC--CCCCeeEeccccc
Q 023205          262 AATDPV--FPPGIVDVHGILR  280 (286)
Q Consensus       262 ~l~~~~--~~~~~~~l~~~~~  280 (286)
                      ++..+.  ..+.++.+.|+..
T Consensus       272 L~s~~~~~itG~~i~vdgG~~  292 (294)
T PRK07985        272 LASQESSYVTAEVHGVCGGEH  292 (294)
T ss_pred             hhChhcCCccccEEeeCCCee
Confidence            987543  4578888888653

>PRK12747 short chain dehydrogenase; Provisional

Probab=99.81  E-value=5.4e-18  Score=142.11  Aligned_cols=208  Identities=21%  Similarity=0.146  Sum_probs=141.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc----c--ccCCceeEEeccCCCHhHHHHHhc---------
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR----D--SWANNVIWHQGNLLSSDSWKEALD---------  120 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~----~--~~~~~~~~i~~Dl~d~~~~~~~~~---------  120 (286)
                      .++++||||+|+||.+++++|++.|++|++..++......    +  .....+..+.+|+.+.+++..+++         
T Consensus         4 ~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   83 (252)
T PRK12747          4 GKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQNR   83 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhhhh
Confidence            5789999999999999999999999999887543222111    1  112356788999999876654331         


Q ss_pred             ----CCCEEEEccccCCC----------cchhhhhhhHHHHHHHHHHHHcC--CCEEEEEecCCcCCCCccccchHHHHH
Q 023205          121 ----GVTAVISCVGGFGS----------NSYMYKINGTANINAIRAASEKG--VKRFVYISAADFGVANYLLQGYYEGKR  184 (286)
Q Consensus       121 ----~~d~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~~~~--v~~~v~~Ss~~~~~~~~~~~~y~~sK~  184 (286)
                          .+|++|||||....          ....+++|+.++..+++++....  ..+||++||............|+.+|.
T Consensus        84 ~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKa  163 (252)
T PRK12747         84 TGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISLPDFIAYSMTKG  163 (252)
T ss_pred             cCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCcccccCCCCchhHHHHHH
Confidence                58999999985321          13456799999999888776532  248999999643333334568999999


Q ss_pred             HHHHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHH
Q 023205          185 AAETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKV  258 (286)
Q Consensus       185 ~~E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~  258 (286)
                      ..+.+++.      ..|++++++.||.+.++......       ..  ..........  .|     ...+.+++|+|++
T Consensus       164 a~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~-------~~--~~~~~~~~~~--~~-----~~~~~~~~dva~~  227 (252)
T PRK12747        164 AINTMTFTLAKQLGARGITVNAILPGFIKTDMNAELL-------SD--PMMKQYATTI--SA-----FNRLGEVEDIADT  227 (252)
T ss_pred             HHHHHHHHHHHHHhHcCCEEEEEecCCccCchhhhcc-------cC--HHHHHHHHhc--Cc-----ccCCCCHHHHHHH
Confidence            99987753      46899999999999876432110       00  0011111100  01     1246789999999


Q ss_pred             HHHHhcCCC--CCCCeeEecccc
Q 023205          259 AVRAATDPV--FPPGIVDVHGIL  279 (286)
Q Consensus       259 ~~~~l~~~~--~~~~~~~l~~~~  279 (286)
                      +..++....  ..|+.+.+.|..
T Consensus       228 ~~~l~s~~~~~~~G~~i~vdgg~  250 (252)
T PRK12747        228 AAFLASPDSRWVTGQLIDVSGGS  250 (252)
T ss_pred             HHHHcCccccCcCCcEEEecCCc
Confidence            999886432  457788887753

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=99.81  E-value=2.1e-18  Score=149.33  Aligned_cols=207  Identities=20%  Similarity=0.131  Sum_probs=142.4

Q ss_pred             CCCCCCCCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCccccccc----CCceeEEeccCCCHhHHH-HHhc---
Q 023205           49 VNVPPPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSW----ANNVIWHQGNLLSSDSWK-EALD---  120 (286)
Q Consensus        49 ~~~~~~~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~----~~~~~~i~~Dl~d~~~~~-~~~~---  120 (286)
                      .+..+..+++|+|+||||.+|+.+++.|+++|+.|++++|+..+......    ......+..|...+.+.. .+.+   
T Consensus        72 ~~~~~~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~~~~~d~~~~~v~~~~~~~~d~~~~~~~~~~  151 (411)
T KOG1203|consen   72 PNNNSKKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLGVFFVDLGLQNVEADVVTAIDILKKLVEAVP  151 (411)
T ss_pred             CCCCCCCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhcccccccccceeeeccccccchhhhhhhhcc
Confidence            33344456799999999999999999999999999999999766433222    345555566554443332 2322   


Q ss_pred             -CCCEEEEccccCCCc---chhhhhhhHHHHHHHHHHHHcCCCEEEEEecCCcCCCCccccchH------HHHHHHHHHH
Q 023205          121 -GVTAVISCVGGFGSN---SYMYKINGTANINAIRAASEKGVKRFVYISAADFGVANYLLQGYY------EGKRAAETEL  190 (286)
Q Consensus       121 -~~d~vi~~a~~~~~~---~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~~~~~~~~~~~~y~------~sK~~~E~~~  190 (286)
                       +..+++-|++.....   ..-..++..|++|++++|+.+|++||+++|++.......+.+.+.      .+|..+|+++
T Consensus       152 ~~~~~v~~~~ggrp~~ed~~~p~~VD~~g~knlvdA~~~aGvk~~vlv~si~~~~~~~~~~~~~~~~~~~~~k~~~e~~~  231 (411)
T KOG1203|consen  152 KGVVIVIKGAGGRPEEEDIVTPEKVDYEGTKNLVDACKKAGVKRVVLVGSIGGTKFNQPPNILLLNGLVLKAKLKAEKFL  231 (411)
T ss_pred             ccceeEEecccCCCCcccCCCcceecHHHHHHHHHHHHHhCCceEEEEEeecCcccCCCchhhhhhhhhhHHHHhHHHHH
Confidence             345677776654433   345578999999999999999999999999975555555555555      8899999977


Q ss_pred             HHhCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcCCCCCC
Q 023205          191 LTRYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDPVFPP  270 (286)
Q Consensus       191 ~~~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~~~~~  270 (286)
                      .+ .|++++|||++...-+...... .+             ..  ..+.-..+++.--.++..|+|+.+++++.++...+
T Consensus       232 ~~-Sgl~ytiIR~g~~~~~~~~~~~-~~-------------~~--~~~~~~~~~~~~~~i~r~~vael~~~all~~~~~~  294 (411)
T KOG1203|consen  232 QD-SGLPYTIIRPGGLEQDTGGQRE-VV-------------VD--DEKELLTVDGGAYSISRLDVAELVAKALLNEAATF  294 (411)
T ss_pred             Hh-cCCCcEEEeccccccCCCCcce-ec-------------cc--CccccccccccceeeehhhHHHHHHHHHhhhhhcc
Confidence            75 9999999999998754332110 00             00  00001111222236899999999999999888666


Q ss_pred             Ce
Q 023205          271 GI  272 (286)
Q Consensus       271 ~~  272 (286)
                      +.
T Consensus       295 ~k  296 (411)
T KOG1203|consen  295 KK  296 (411)
T ss_pred             ce
Confidence            43

>PRK07035 short chain dehydrogenase; Provisional

Probab=99.81  E-value=6.7e-18  Score=141.52  Aligned_cols=208  Identities=13%  Similarity=0.054  Sum_probs=144.8

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc---c--ccCCceeEEeccCCCHhHHHHHhc-------CC
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR---D--SWANNVIWHQGNLLSSDSWKEALD-------GV  122 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~---~--~~~~~~~~i~~Dl~d~~~~~~~~~-------~~  122 (286)
                      +.++|+||||+|+||.+++++|+++|++|++++|+.++...   +  .....+.++++|+.|.++++.+++       .+
T Consensus         7 ~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   86 (252)
T PRK07035          7 TGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERHGRL   86 (252)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            35789999999999999999999999999999997643211   1  112357889999999988876664       47


Q ss_pred             CEEEEccccCCC-----------cchhhhhhhHHHHHHHHHH----HHcCCCEEEEEecCCcCCCCccccchHHHHHHHH
Q 023205          123 TAVISCVGGFGS-----------NSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKRAAE  187 (286)
Q Consensus       123 d~vi~~a~~~~~-----------~~~~~~~~~~~~~~l~~~a----~~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E  187 (286)
                      |+|||+++....           ....+++|+.++..+++++    ++.+..+++++||........+...|+.+|...|
T Consensus        87 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~al~  166 (252)
T PRK07035         87 DILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVSPGDFQGIYSITKAAVI  166 (252)
T ss_pred             CEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhcCCCCCCcchHHHHHHHH
Confidence            999999985321           1245678888988777666    4455679999998533333445678999999999


Q ss_pred             HHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHH
Q 023205          188 TELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVR  261 (286)
Q Consensus       188 ~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~  261 (286)
                      .+++.      ..|++++.+.||.+..+......       .. ...+... .  ...|     ...+...+|+|++++.
T Consensus       167 ~~~~~l~~e~~~~gi~v~~i~PG~v~t~~~~~~~-------~~-~~~~~~~-~--~~~~-----~~~~~~~~~va~~~~~  230 (252)
T PRK07035        167 SMTKAFAKECAPFGIRVNALLPGLTDTKFASALF-------KN-DAILKQA-L--AHIP-----LRRHAEPSEMAGAVLY  230 (252)
T ss_pred             HHHHHHHHHHhhcCEEEEEEeeccccCccccccc-------CC-HHHHHHH-H--ccCC-----CCCcCCHHHHHHHHHH
Confidence            87753      45899999999998654321110       00 0111111 1  1112     1235688999999999


Q ss_pred             HhcCCC--CCCCeeEeccc
Q 023205          262 AATDPV--FPPGIVDVHGI  278 (286)
Q Consensus       262 ~l~~~~--~~~~~~~l~~~  278 (286)
                      ++.+..  ..|+++.+.|.
T Consensus       231 l~~~~~~~~~g~~~~~dgg  249 (252)
T PRK07035        231 LASDASSYTTGECLNVDGG  249 (252)
T ss_pred             HhCccccCccCCEEEeCCC
Confidence            887543  35778888765

>PRK08267 short chain dehydrogenase; Provisional

Probab=99.81  E-value=7.7e-19  Score=147.92  Aligned_cols=191  Identities=16%  Similarity=0.089  Sum_probs=134.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc---cccCCceeEEeccCCCHhHHHHHhc--------CCCE
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR---DSWANNVIWHQGNLLSSDSWKEALD--------GVTA  124 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~---~~~~~~~~~i~~Dl~d~~~~~~~~~--------~~d~  124 (286)
                      |++++||||+|+||++++++|+++|++|++++|+.++...   .....++.++++|+.|.+++.++++        .+|+
T Consensus         1 mk~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~   80 (260)
T PRK08267          1 MKSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLDV   80 (260)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCCE
Confidence            4689999999999999999999999999999998754211   1113478999999999988887665        4699


Q ss_pred             EEEccccCCC----------cchhhhhhhHHHHHHHHHHH----HcCCCEEEEEecCCcCCCCccccchHHHHHHHHHHH
Q 023205          125 VISCVGGFGS----------NSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEGKRAAETEL  190 (286)
Q Consensus       125 vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~----~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~  190 (286)
                      ||||||....          ....+++|+.++.++++++.    ..+..+||++||............|+.+|...+.+.
T Consensus        81 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKaa~~~~~  160 (260)
T PRK08267         81 LFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASAIYGQPGLAVYSATKFAVRGLT  160 (260)
T ss_pred             EEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhhCcCCCCchhhHHHHHHHHHHH
Confidence            9999987531          13457899999998888774    344568999999421112234567999999988766


Q ss_pred             HH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhc
Q 023205          191 LT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAAT  264 (286)
Q Consensus       191 ~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~  264 (286)
                      ..      ..++++++++||.+..+......       ...   ......          .....+..+|+|++++.+++
T Consensus       161 ~~l~~~~~~~~i~v~~i~pg~~~t~~~~~~~-------~~~---~~~~~~----------~~~~~~~~~~va~~~~~~~~  220 (260)
T PRK08267        161 EALDLEWRRHGIRVADVMPLFVDTAMLDGTS-------NEV---DAGSTK----------RLGVRLTPEDVAEAVWAAVQ  220 (260)
T ss_pred             HHHHHHhcccCcEEEEEecCCcCCccccccc-------chh---hhhhHh----------hccCCCCHHHHHHHHHHHHh
Confidence            43      35899999999998654321100       000   000000          01113667999999999996


Q ss_pred             CC
Q 023205          265 DP  266 (286)
Q Consensus       265 ~~  266 (286)
                      .+
T Consensus       221 ~~  222 (260)
T PRK08267        221 HP  222 (260)
T ss_pred             CC
Confidence            54

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=99.81  E-value=2.8e-18  Score=143.41  Aligned_cols=206  Identities=19%  Similarity=0.194  Sum_probs=138.0

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc------cccCCceeEEeccCCCHhHHHHHhc-------C
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD-------G  121 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~------~~~~~~~~~i~~Dl~d~~~~~~~~~-------~  121 (286)
                      |+++|+||||+|+||..+++.|+++|++|+++.++..+...      .....++.++.+|++|.+++.++++       .
T Consensus         1 m~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   80 (248)
T PRK06947          1 MRKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFGR   80 (248)
T ss_pred             CCcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcCC
Confidence            46799999999999999999999999999877654322111      1113468899999999988776654       5


Q ss_pred             CCEEEEccccCCC-----------cchhhhhhhHHHHHHHHHHHH-cC------CCEEEEEecCC--cCCCCccccchHH
Q 023205          122 VTAVISCVGGFGS-----------NSYMYKINGTANINAIRAASE-KG------VKRFVYISAAD--FGVANYLLQGYYE  181 (286)
Q Consensus       122 ~d~vi~~a~~~~~-----------~~~~~~~~~~~~~~l~~~a~~-~~------v~~~v~~Ss~~--~~~~~~~~~~y~~  181 (286)
                      +|+|||++|....           ....+++|+.++..+++.+.+ ..      -.+||++||..  ++.. .....|+.
T Consensus        81 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~-~~~~~Y~~  159 (248)
T PRK06947         81 LDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGSP-NEYVDYAG  159 (248)
T ss_pred             CCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCCC-CCCcccHh
Confidence            8999999986421           123467899998877755432 21      13699999842  2222 12346999


Q ss_pred             HHHHHHHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHH
Q 023205          182 GKRAAETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVV  255 (286)
Q Consensus       182 sK~~~E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dv  255 (286)
                      +|...+.++..      ..+++++++|||.+..+.....        +.. ... ....  ...|.     ....+++|+
T Consensus       160 sK~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~~--------~~~-~~~-~~~~--~~~~~-----~~~~~~e~v  222 (248)
T PRK06947        160 SKGAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIHASG--------GQP-GRA-ARLG--AQTPL-----GRAGEADEV  222 (248)
T ss_pred             hHHHHHHHHHHHHHHhhhhCcEEEEEeccCccccccccc--------CCH-HHH-HHHh--hcCCC-----CCCcCHHHH
Confidence            99999976642      3589999999999977642110        000 111 0000  11111     124688999


Q ss_pred             HHHHHHHhcCCC--CCCCeeEeccc
Q 023205          256 AKVAVRAATDPV--FPPGIVDVHGI  278 (286)
Q Consensus       256 a~~~~~~l~~~~--~~~~~~~l~~~  278 (286)
                      |++++.++.++.  ..|+.+.+.|.
T Consensus       223 a~~~~~l~~~~~~~~~G~~~~~~gg  247 (248)
T PRK06947        223 AETIVWLLSDAASYVTGALLDVGGG  247 (248)
T ss_pred             HHHHHHHcCccccCcCCceEeeCCC
Confidence            999999988654  45778777664

>PRK05866 short chain dehydrogenase; Provisional

Probab=99.81  E-value=2e-18  Score=147.81  Aligned_cols=184  Identities=17%  Similarity=0.143  Sum_probs=133.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc---c--ccCCceeEEeccCCCHhHHHHHhc-------CCC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR---D--SWANNVIWHQGNLLSSDSWKEALD-------GVT  123 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~---~--~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d  123 (286)
                      .++|+||||+|+||.+++++|+++|++|++++|+.+....   +  .....+.++++|+.|.+++.++++       ++|
T Consensus        40 ~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~id  119 (293)
T PRK05866         40 GKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIGGVD  119 (293)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            4789999999999999999999999999999998643211   0  112357889999999998888776       689


Q ss_pred             EEEEccccCCC------------cchhhhhhhHHHHHHHHHHH----HcCCCEEEEEecCC-cCCCCccccchHHHHHHH
Q 023205          124 AVISCVGGFGS------------NSYMYKINGTANINAIRAAS----EKGVKRFVYISAAD-FGVANYLLQGYYEGKRAA  186 (286)
Q Consensus       124 ~vi~~a~~~~~------------~~~~~~~~~~~~~~l~~~a~----~~~v~~~v~~Ss~~-~~~~~~~~~~y~~sK~~~  186 (286)
                      +||||||....            ....+++|+.+..++++++.    +.+..++|++||.. +.........|+.+|...
T Consensus       120 ~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~p~~~~Y~asKaal  199 (293)
T PRK05866        120 ILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGVLSEASPLFSVYNASKAAL  199 (293)
T ss_pred             EEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCCCCcchHHHHHHHH
Confidence            99999986421            12356788888887776653    55667999999953 222233456799999999


Q ss_pred             HHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHH
Q 023205          187 ETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAV  260 (286)
Q Consensus       187 E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~  260 (286)
                      +.+...      ..|+++++++||.+-.+.....                   .   .  .  . ....++.+++|+.++
T Consensus       200 ~~l~~~la~e~~~~gI~v~~v~pg~v~T~~~~~~-------------------~---~--~--~-~~~~~~pe~vA~~~~  252 (293)
T PRK05866        200 SAVSRVIETEWGDRGVHSTTLYYPLVATPMIAPT-------------------K---A--Y--D-GLPALTADEAAEWMV  252 (293)
T ss_pred             HHHHHHHHHHhcccCcEEEEEEcCcccCcccccc-------------------c---c--c--c-CCCCCCHHHHHHHHH
Confidence            876543      4689999999997754421100                   0   0  0  0 112368999999999


Q ss_pred             HHhcCC
Q 023205          261 RAATDP  266 (286)
Q Consensus       261 ~~l~~~  266 (286)
                      .+++++
T Consensus       253 ~~~~~~  258 (293)
T PRK05866        253 TAARTR  258 (293)
T ss_pred             HHHhcC
Confidence            999864

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.81  E-value=7.5e-18  Score=139.70  Aligned_cols=205  Identities=16%  Similarity=0.121  Sum_probs=144.1

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCH-hHHHHHhcCCCEEEEccccCC
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSS-DSWKEALDGVTAVISCVGGFG  133 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~-~~~~~~~~~~d~vi~~a~~~~  133 (286)
                      +.++++|||++|+||.++++.|+++|++|++++|+.....    ..++.++.+|+.++ +.+.+.+..+|+|||++|...
T Consensus         4 ~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~id~lv~~ag~~~   79 (235)
T PRK06550          4 MTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPDL----SGNFHFLQLDLSDDLEPLFDWVPSVDILCNTAGILD   79 (235)
T ss_pred             CCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCccccc----CCcEEEEECChHHHHHHHHHhhCCCCEEEECCCCCC
Confidence            3578999999999999999999999999999999864421    34688999999987 444555567899999998532


Q ss_pred             C-----------cchhhhhhhHHHHHHHHHHHH----cCCCEEEEEecCCcCCCCccccchHHHHHHHHHHHHH------
Q 023205          134 S-----------NSYMYKINGTANINAIRAASE----KGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLT------  192 (286)
Q Consensus       134 ~-----------~~~~~~~~~~~~~~l~~~a~~----~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~~------  192 (286)
                      .           ....+++|+.++.++++++..    .+..+||++||............|+.+|...+.+...      
T Consensus        80 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~  159 (235)
T PRK06550         80 DYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFVAGGGGAAYTASKHALAGFTKQLALDYA  159 (235)
T ss_pred             CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCCCCcccHHHHHHHHHHHHHHHHHhh
Confidence            1           124568899999988887753    3446899999953222223456799999998876643      


Q ss_pred             hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcCC--CCCC
Q 023205          193 RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDP--VFPP  270 (286)
Q Consensus       193 ~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~--~~~~  270 (286)
                      ..|+++++++||.+.++.....+  +    .   ..+......  ..|     ...+...+|+|++++.++.+.  ...+
T Consensus       160 ~~gi~v~~v~pg~v~t~~~~~~~--~----~---~~~~~~~~~--~~~-----~~~~~~~~~~a~~~~~l~s~~~~~~~g  223 (235)
T PRK06550        160 KDGIQVFGIAPGAVKTPMTAADF--E----P---GGLADWVAR--ETP-----IKRWAEPEEVAELTLFLASGKADYMQG  223 (235)
T ss_pred             hcCeEEEEEeeCCccCccccccc--C----c---hHHHHHHhc--cCC-----cCCCCCHHHHHHHHHHHcChhhccCCC
Confidence            45899999999999776432211  0    0   111111111  112     234678899999999999653  3457


Q ss_pred             CeeEecccc
Q 023205          271 GIVDVHGIL  279 (286)
Q Consensus       271 ~~~~l~~~~  279 (286)
                      .++.+.|..
T Consensus       224 ~~~~~~gg~  232 (235)
T PRK06550        224 TIVPIDGGW  232 (235)
T ss_pred             cEEEECCce
Confidence            788887763

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=99.81  E-value=6.1e-18  Score=142.05  Aligned_cols=209  Identities=15%  Similarity=0.121  Sum_probs=147.6

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc-----cccCCceeEEeccCCCHhHHHHHhc-------CC
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------GV  122 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~-----~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~  122 (286)
                      .+++|+||||+|+||.+++++|+++|++|++++|+......     .....++.++.+|++|.+++.++++       .+
T Consensus        10 ~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   89 (255)
T PRK06113         10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKLGKV   89 (255)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            36799999999999999999999999999999987544211     1112367889999999998877654       47


Q ss_pred             CEEEEccccCCC---------cchhhhhhhHHHHHHHHHHHH----cCCCEEEEEecCCcCCCCccccchHHHHHHHHHH
Q 023205          123 TAVISCVGGFGS---------NSYMYKINGTANINAIRAASE----KGVKRFVYISAADFGVANYLLQGYYEGKRAAETE  189 (286)
Q Consensus       123 d~vi~~a~~~~~---------~~~~~~~~~~~~~~l~~~a~~----~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~  189 (286)
                      |++|||+|....         ....+++|+.++.++++++..    .+..+||++||............|+.+|...+.+
T Consensus        90 d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~  169 (255)
T PRK06113         90 DILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHL  169 (255)
T ss_pred             CEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccccCCCCCcchhHHHHHHHHHH
Confidence            999999986421         123468999999999888853    3445899999954333334556799999999987


Q ss_pred             HHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHh
Q 023205          190 LLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAA  263 (286)
Q Consensus       190 ~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l  263 (286)
                      ++.      ..|++++++.||.+..+...... .     .   . +.....  ...+.     ..+..++|++++++.++
T Consensus       170 ~~~la~~~~~~~i~v~~v~pg~~~t~~~~~~~-~-----~---~-~~~~~~--~~~~~-----~~~~~~~d~a~~~~~l~  232 (255)
T PRK06113        170 VRNMAFDLGEKNIRVNGIAPGAILTDALKSVI-T-----P---E-IEQKML--QHTPI-----RRLGQPQDIANAALFLC  232 (255)
T ss_pred             HHHHHHHhhhhCeEEEEEeccccccccccccc-C-----H---H-HHHHHH--hcCCC-----CCCcCHHHHHHHHHHHc
Confidence            753      46799999999998755321110 0     0   1 111111  11121     23568899999999999


Q ss_pred             cCCC--CCCCeeEeccccc
Q 023205          264 TDPV--FPPGIVDVHGILR  280 (286)
Q Consensus       264 ~~~~--~~~~~~~l~~~~~  280 (286)
                      ....  ..|+++.+.|...
T Consensus       233 ~~~~~~~~G~~i~~~gg~~  251 (255)
T PRK06113        233 SPAASWVSGQILTVSGGGV  251 (255)
T ss_pred             CccccCccCCEEEECCCcc
Confidence            7543  3578999988643

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=99.81  E-value=9.6e-18  Score=141.67  Aligned_cols=214  Identities=14%  Similarity=0.071  Sum_probs=147.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc-----cccCCceeEEeccCCCHhHHHHHhc-------CCC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------GVT  123 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~-----~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d  123 (286)
                      .++++||||+|+||.+++++|+++|++|+++.|+.++...     .....++.++++|++|.+++++++.       .+|
T Consensus        10 ~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   89 (265)
T PRK07097         10 GKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVGVID   89 (265)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCCCC
Confidence            5789999999999999999999999999999888654211     1112368899999999998887775       379


Q ss_pred             EEEEccccCCC----------cchhhhhhhHHHHHHHHHHH----HcCCCEEEEEecCCcCCCCccccchHHHHHHHHHH
Q 023205          124 AVISCVGGFGS----------NSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEGKRAAETE  189 (286)
Q Consensus       124 ~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~----~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~  189 (286)
                      +||||+|....          ....+++|+.+...+.+.+.    +.+..+||++||............|+.+|...+.+
T Consensus        90 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaal~~l  169 (265)
T PRK07097         90 ILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSELGRETVSAYAAAKGGLKML  169 (265)
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCccccCCCCCCccHHHHHHHHHHH
Confidence            99999997531          12445788888887766654    34567999999953222334567899999999987


Q ss_pred             HHH------hCCCcEEEEeeCeeecCCCCCccc-cCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHH
Q 023205          190 LLT------RYPYGGVILRPGFIYGTRTVGGMK-LPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRA  262 (286)
Q Consensus       190 ~~~------~~g~~~~ilRp~~v~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~  262 (286)
                      .+.      ..|++++.++||.+..+....... ...+......+.+..      ..|     ...+...+|+|++++.+
T Consensus       170 ~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~------~~~-----~~~~~~~~dva~~~~~l  238 (265)
T PRK07097        170 TKNIASEYGEANIQCNGIGPGYIATPQTAPLRELQADGSRHPFDQFIIA------KTP-----AARWGDPEDLAGPAVFL  238 (265)
T ss_pred             HHHHHHHhhhcCceEEEEEeccccccchhhhhhccccccchhHHHHHHh------cCC-----ccCCcCHHHHHHHHHHH
Confidence            753      468999999999998764321100 000000001111110      111     12356889999999999


Q ss_pred             hcCC--CCCCCeeEeccccc
Q 023205          263 ATDP--VFPPGIVDVHGILR  280 (286)
Q Consensus       263 l~~~--~~~~~~~~l~~~~~  280 (286)
                      +...  ...++.+.+.+...
T Consensus       239 ~~~~~~~~~g~~~~~~gg~~  258 (265)
T PRK07097        239 ASDASNFVNGHILYVDGGIL  258 (265)
T ss_pred             hCcccCCCCCCEEEECCCce
Confidence            9763  34577888877643

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.81  E-value=7.6e-18  Score=141.74  Aligned_cols=210  Identities=15%  Similarity=0.137  Sum_probs=145.5

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcc-cc---cccCCceeEEeccCCCHhHHHHHhc-------CCC
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSS-LR---DSWANNVIWHQGNLLSSDSWKEALD-------GVT  123 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~-~~---~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d  123 (286)
                      ..++||||||+|+||.++++.|+++|++|+++.|+.... ..   .....++.++.+|++|.+++.++++       .+|
T Consensus        14 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id   93 (258)
T PRK06935         14 DGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHGTNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFGKID   93 (258)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            357999999999999999999999999999999983211 11   1113468899999999998887775       579


Q ss_pred             EEEEccccCCC----------cchhhhhhhHHHHHHHHHHH----HcCCCEEEEEecCCcCCCCccccchHHHHHHHHHH
Q 023205          124 AVISCVGGFGS----------NSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEGKRAAETE  189 (286)
Q Consensus       124 ~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~----~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~  189 (286)
                      ++||++|....          ....+++|+.+...+.+++.    +.+..++|++||............|+.+|...|.+
T Consensus        94 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~  173 (258)
T PRK06935         94 ILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQGGKFVPAYTASKHGVAGL  173 (258)
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhccCCCCchhhHHHHHHHHHH
Confidence            99999986421          12456788888877776654    44556899999953222233456899999999987


Q ss_pred             HHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHh
Q 023205          190 LLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAA  263 (286)
Q Consensus       190 ~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l  263 (286)
                      .+.      ..|+++++++||.+..+......  ..   ......+.      ..+|     ...+...+|+|+++..++
T Consensus       174 ~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~--~~---~~~~~~~~------~~~~-----~~~~~~~~dva~~~~~l~  237 (258)
T PRK06935        174 TKAFANELAAYNIQVNAIAPGYIKTANTAPIR--AD---KNRNDEIL------KRIP-----AGRWGEPDDLMGAAVFLA  237 (258)
T ss_pred             HHHHHHHhhhhCeEEEEEEeccccccchhhcc--cC---hHHHHHHH------hcCC-----CCCCCCHHHHHHHHHHHc
Confidence            653      46899999999998765321100  00   00001111      1122     134678899999999988


Q ss_pred             cCCC--CCCCeeEeccccc
Q 023205          264 TDPV--FPPGIVDVHGILR  280 (286)
Q Consensus       264 ~~~~--~~~~~~~l~~~~~  280 (286)
                      ....  ..|.++.+.|...
T Consensus       238 s~~~~~~~G~~i~~dgg~~  256 (258)
T PRK06935        238 SRASDYVNGHILAVDGGWL  256 (258)
T ss_pred             ChhhcCCCCCEEEECCCee
Confidence            6533  4578888887643

>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]

Probab=99.81  E-value=6.3e-19  Score=138.35  Aligned_cols=207  Identities=19%  Similarity=0.151  Sum_probs=147.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC--eEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcC--CCEEEEcccc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGL--TVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDG--VTAVISCVGG  131 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~--~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~--~d~vi~~a~~  131 (286)
                      +++|||||++|.+|+++.+.+.+++.  +=.++.-+.               .+|+++.++.+++|+.  ..+|||+|+.
T Consensus         1 s~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~sk---------------d~DLt~~a~t~~lF~~ekPthVIhlAAm   65 (315)
T KOG1431|consen    1 SKKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGSK---------------DADLTNLADTRALFESEKPTHVIHLAAM   65 (315)
T ss_pred             CceEEEecCCchHHHHHHHHHHhcCCCCcceEEeccc---------------cccccchHHHHHHHhccCCceeeehHhh
Confidence            46899999999999999999999985  222222221               4699999999999974  6999999986


Q ss_pred             CC-------CcchhhhhhhHHHHHHHHHHHHcCCCEEEEEecC-Cc---------------CCCCccccchHHHHHHHHH
Q 023205          132 FG-------SNSYMYKINGTANINAIRAASEKGVKRFVYISAA-DF---------------GVANYLLQGYYEGKRAAET  188 (286)
Q Consensus       132 ~~-------~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~-~~---------------~~~~~~~~~y~~sK~~~E~  188 (286)
                      +.       .+..+++.|+....|++..|-+.|+++++++-|. .|               |++.+..-+|.-+|..+.-
T Consensus        66 VGGlf~N~~ynldF~r~Nl~indNVlhsa~e~gv~K~vsclStCIfPdkt~yPIdEtmvh~gpphpsN~gYsyAKr~idv  145 (315)
T KOG1431|consen   66 VGGLFHNNTYNLDFIRKNLQINDNVLHSAHEHGVKKVVSCLSTCIFPDKTSYPIDETMVHNGPPHPSNFGYSYAKRMIDV  145 (315)
T ss_pred             hcchhhcCCCchHHHhhcceechhHHHHHHHhchhhhhhhcceeecCCCCCCCCCHHHhccCCCCCCchHHHHHHHHHHH
Confidence            52       3457889999999999999999999998887773 22               2222334578888966553


Q ss_pred             HH---HHhCCCcEEEEeeCeeecCCCCCccccCccccCchHHHH-HHhcccCCCCCCCCCc--cCCCccHHHHHHHHHHH
Q 023205          189 EL---LTRYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMV-LQHAKPLSQLPLVGPL--FTPPVNVTVVAKVAVRA  262 (286)
Q Consensus       189 ~~---~~~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~--~~~~i~v~Dva~~~~~~  262 (286)
                      .-   +.++|..++.+-|+++|||.+.-+....+-. +..+..+ .........+.++|.+  .+.|++++|+|++++.+
T Consensus       146 ~n~aY~~qhg~~~tsviPtNvfGphDNfnpe~sHVl-Pali~r~h~ak~~gtd~~~VwGsG~PlRqFiys~DLA~l~i~v  224 (315)
T KOG1431|consen  146 QNQAYRQQHGRDYTSVIPTNVFGPHDNFNPENSHVL-PALIHRFHEAKRNGTDELTVWGSGSPLRQFIYSDDLADLFIWV  224 (315)
T ss_pred             HHHHHHHHhCCceeeeccccccCCCCCCCcccccch-HHHHHHHHHHHhcCCceEEEecCCChHHHHhhHhHHHHHHHHH
Confidence            22   3468999999999999999876443333322 2222222 2222333366777665  78999999999999999


Q ss_pred             hcCCCCCCCeeEecccc
Q 023205          263 ATDPVFPPGIVDVHGIL  279 (286)
Q Consensus       263 l~~~~~~~~~~~l~~~~  279 (286)
                      +.+-+. -+.++++.++
T Consensus       225 lr~Y~~-vEpiils~ge  240 (315)
T KOG1431|consen  225 LREYEG-VEPIILSVGE  240 (315)
T ss_pred             HHhhcC-ccceEeccCc
Confidence            976442 3445554444

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=99.81  E-value=4.9e-18  Score=141.33  Aligned_cols=205  Identities=18%  Similarity=0.190  Sum_probs=140.3

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc------cccCCceeEEeccCCCHhHHHHHhc-------CCC
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD-------GVT  123 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~------~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d  123 (286)
                      +++|||||+|+||+++++.|+++|++|+++.|.......      .....++.++.+|+.|++++.++++       .+|
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPID   80 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCc
Confidence            479999999999999999999999999999983222111      1113468899999999988776654       479


Q ss_pred             EEEEccccCCC----------cchhhhhhhHHHHHHHH----HHHHcCCCEEEEEecCCcCCCCccccchHHHHHHHHHH
Q 023205          124 AVISCVGGFGS----------NSYMYKINGTANINAIR----AASEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETE  189 (286)
Q Consensus       124 ~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~----~a~~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~  189 (286)
                      +||||+|....          ....++.|+.++..+++    .+++.+.++||++||............|+.+|...+.+
T Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sk~a~~~~  160 (242)
T TIGR01829        81 VLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIINISSVNGQKGQFGQTNYSAAKAGMIGF  160 (242)
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCCCcchhHHHHHHHHHH
Confidence            99999986431          12345778888766544    44556677999999953222233456799999988765


Q ss_pred             HHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHh
Q 023205          190 LLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAA  263 (286)
Q Consensus       190 ~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l  263 (286)
                      ++.      ..++++++++||.+.++.....   +    ..   .+.....   ..|.     ..+...+|+++++..++
T Consensus       161 ~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~---~----~~---~~~~~~~---~~~~-----~~~~~~~~~a~~~~~l~  222 (242)
T TIGR01829       161 TKALAQEGATKGVTVNTISPGYIATDMVMAM---R----ED---VLNSIVA---QIPV-----GRLGRPEEIAAAVAFLA  222 (242)
T ss_pred             HHHHHHHhhhhCeEEEEEeeCCCcCcccccc---c----hH---HHHHHHh---cCCC-----CCCcCHHHHHHHHHHHc
Confidence            542      4689999999999987643211   0    11   1111111   1111     12457799999998888


Q ss_pred             cCCC--CCCCeeEecccc
Q 023205          264 TDPV--FPPGIVDVHGIL  279 (286)
Q Consensus       264 ~~~~--~~~~~~~l~~~~  279 (286)
                      .++.  ..|+.+.+.|..
T Consensus       223 ~~~~~~~~G~~~~~~gg~  240 (242)
T TIGR01829       223 SEEAGYITGATLSINGGL  240 (242)
T ss_pred             CchhcCccCCEEEecCCc
Confidence            6543  568899988864

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK05867 short chain dehydrogenase; Provisional

Probab=99.81  E-value=3.4e-18  Score=143.41  Aligned_cols=205  Identities=14%  Similarity=0.110  Sum_probs=143.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc-----cccCCceeEEeccCCCHhHHHHHhc-------CCC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------GVT  123 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~-----~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d  123 (286)
                      .++++||||+|+||.++++.|+++|++|+++.|+.++...     .....++.++.+|++|+++++++++       .+|
T Consensus         9 ~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   88 (253)
T PRK05867          9 GKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELGGID   88 (253)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence            5789999999999999999999999999999998654211     0112467889999999998877664       689


Q ss_pred             EEEEccccCCC----------cchhhhhhhHHHHHHHHHHHH----cC-CCEEEEEecCCcCCC--CccccchHHHHHHH
Q 023205          124 AVISCVGGFGS----------NSYMYKINGTANINAIRAASE----KG-VKRFVYISAADFGVA--NYLLQGYYEGKRAA  186 (286)
Q Consensus       124 ~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~~----~~-v~~~v~~Ss~~~~~~--~~~~~~y~~sK~~~  186 (286)
                      ++|||+|....          ....+++|+.+...+++++..    .+ -.++|++||......  ......|+.+|...
T Consensus        89 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~Y~asKaal  168 (253)
T PRK05867         89 IAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHIINVPQQVSHYCASKAAV  168 (253)
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCCCCCCCccchHHHHHHH
Confidence            99999986431          124557899999888887743    22 247899988422111  12346799999999


Q ss_pred             HHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHH
Q 023205          187 ETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAV  260 (286)
Q Consensus       187 E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~  260 (286)
                      +.+.+.      ..|+++++++||.+-.+.....        .   +......   ...|.     ..+...+|+|++++
T Consensus       169 ~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~~~--------~---~~~~~~~---~~~~~-----~r~~~p~~va~~~~  229 (253)
T PRK05867        169 IHLTKAMAVELAPHKIRVNSVSPGYILTELVEPY--------T---EYQPLWE---PKIPL-----GRLGRPEELAGLYL  229 (253)
T ss_pred             HHHHHHHHHHHhHhCeEEEEeecCCCCCcccccc--------h---HHHHHHH---hcCCC-----CCCcCHHHHHHHHH
Confidence            987753      4689999999999965532110        0   1111111   11221     24678999999999


Q ss_pred             HHhcCCC--CCCCeeEecccc
Q 023205          261 RAATDPV--FPPGIVDVHGIL  279 (286)
Q Consensus       261 ~~l~~~~--~~~~~~~l~~~~  279 (286)
                      .++....  ..|+++.+.|+.
T Consensus       230 ~L~s~~~~~~tG~~i~vdgG~  250 (253)
T PRK05867        230 YLASEASSYMTGSDIVIDGGY  250 (253)
T ss_pred             HHcCcccCCcCCCeEEECCCc
Confidence            9986433  457888888764

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=99.80  E-value=5e-18  Score=141.76  Aligned_cols=206  Identities=18%  Similarity=0.196  Sum_probs=140.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc----c--ccCCceeEEeccCCCHhHHHHHhc-------CC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR----D--SWANNVIWHQGNLLSSDSWKEALD-------GV  122 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~----~--~~~~~~~~i~~Dl~d~~~~~~~~~-------~~  122 (286)
                      .++++|||++|+||++++++|+++|++|+++.+.......    +  .....+..+.+|+.|.+++.++++       ++
T Consensus         3 ~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   82 (246)
T PRK12938          3 QRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVGEI   82 (246)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence            4689999999999999999999999999886543222111    1  112357788999999988877664       58


Q ss_pred             CEEEEccccCCC----------cchhhhhhhHHHHHHHHHH----HHcCCCEEEEEecCCcCCCCccccchHHHHHHHHH
Q 023205          123 TAVISCVGGFGS----------NSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKRAAET  188 (286)
Q Consensus       123 d~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a----~~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~  188 (286)
                      |+||||+|....          ....+++|+.++..+.+.+    ++.+..+||++||............|+.+|...+.
T Consensus        83 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sK~a~~~  162 (246)
T PRK12938         83 DVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYSTAKAGIHG  162 (246)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhccCCCCCChhHHHHHHHHHH
Confidence            999999987531          1345678888877665554    44566799999995333333456689999998887


Q ss_pred             HHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHH
Q 023205          189 ELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRA  262 (286)
Q Consensus       189 ~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~  262 (286)
                      +...      ..|+++++++||.+.++.....       .....+.+   ..   ..+     ...+...+|++++++.+
T Consensus       163 ~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~~~-------~~~~~~~~---~~---~~~-----~~~~~~~~~v~~~~~~l  224 (246)
T PRK12938        163 FTMSLAQEVATKGVTVNTVSPGYIGTDMVKAI-------RPDVLEKI---VA---TIP-----VRRLGSPDEIGSIVAWL  224 (246)
T ss_pred             HHHHHHHHhhhhCeEEEEEEecccCCchhhhc-------ChHHHHHH---Hh---cCC-----ccCCcCHHHHHHHHHHH
Confidence            6542      4689999999999976643210       01111111   11   111     12356889999999998


Q ss_pred             hcCC--CCCCCeeEecccc
Q 023205          263 ATDP--VFPPGIVDVHGIL  279 (286)
Q Consensus       263 l~~~--~~~~~~~~l~~~~  279 (286)
                      +..+  ...++.+.+.+..
T Consensus       225 ~~~~~~~~~g~~~~~~~g~  243 (246)
T PRK12938        225 ASEESGFSTGADFSLNGGL  243 (246)
T ss_pred             cCcccCCccCcEEEECCcc
Confidence            8653  3457788887753

>PRK06949 short chain dehydrogenase; Provisional

Probab=99.80  E-value=2.7e-18  Score=144.37  Aligned_cols=206  Identities=15%  Similarity=0.075  Sum_probs=144.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc--c---ccCCceeEEeccCCCHhHHHHHhc-------CCC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--D---SWANNVIWHQGNLLSSDSWKEALD-------GVT  123 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~--~---~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d  123 (286)
                      .++|+||||+|+||++++++|+++|++|+++.|+.++...  .   ....++.++.+|+++.+++.++++       .+|
T Consensus         9 ~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   88 (258)
T PRK06949          9 GKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAGTID   88 (258)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCCCC
Confidence            5799999999999999999999999999999998654211  1   112468899999999998887765       489


Q ss_pred             EEEEccccCCC----------cchhhhhhhHHHHHHHHHHHH----cC--------CCEEEEEecCCcCCCCccccchHH
Q 023205          124 AVISCVGGFGS----------NSYMYKINGTANINAIRAASE----KG--------VKRFVYISAADFGVANYLLQGYYE  181 (286)
Q Consensus       124 ~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~~----~~--------v~~~v~~Ss~~~~~~~~~~~~y~~  181 (286)
                      +|||+++....          ....+++|+.+..++++++..    ..        ..++|++||............|+.
T Consensus        89 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~  168 (258)
T PRK06949         89 ILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRVLPQIGLYCM  168 (258)
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccCCCCCccHHHH
Confidence            99999986421          224567888888888776642    21        248999999543333345678999


Q ss_pred             HHHHHHHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHH
Q 023205          182 GKRAAETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVV  255 (286)
Q Consensus       182 sK~~~E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dv  255 (286)
                      +|...|.++..      ..++++++++||.++++.....+       ..  . ......  ..++.     ..+...+|+
T Consensus       169 sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~~~~~-------~~--~-~~~~~~--~~~~~-----~~~~~p~~~  231 (258)
T PRK06949        169 SKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEINHHHW-------ET--E-QGQKLV--SMLPR-----KRVGKPEDL  231 (258)
T ss_pred             HHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcchhcc-------Ch--H-HHHHHH--hcCCC-----CCCcCHHHH
Confidence            99998887653      36899999999999877543211       00  0 001100  11111     235678999


Q ss_pred             HHHHHHHhcCCC--CCCCeeEeccc
Q 023205          256 AKVAVRAATDPV--FPPGIVDVHGI  278 (286)
Q Consensus       256 a~~~~~~l~~~~--~~~~~~~l~~~  278 (286)
                      ++++..++..+.  ..|..+.+.|.
T Consensus       232 ~~~~~~l~~~~~~~~~G~~i~~dgg  256 (258)
T PRK06949        232 DGLLLLLAADESQFINGAIISADDG  256 (258)
T ss_pred             HHHHHHHhChhhcCCCCcEEEeCCC
Confidence            999999987533  45777777664

>PRK08589 short chain dehydrogenase; Validated

Probab=99.80  E-value=4.6e-18  Score=144.22  Aligned_cols=213  Identities=14%  Similarity=0.081  Sum_probs=142.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc---c--ccCCceeEEeccCCCHhHHHHHhc-------CCC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR---D--SWANNVIWHQGNLLSSDSWKEALD-------GVT  123 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~---~--~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d  123 (286)
                      ++++|||||+|+||.++++.|+++|++|+++.|+ ++...   +  ....++.++.+|++|++++..+++       .+|
T Consensus         6 ~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id   84 (272)
T PRK08589          6 NKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGRVD   84 (272)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCCcC
Confidence            5789999999999999999999999999999998 33111   1  112368899999999988876664       479


Q ss_pred             EEEEccccCCC-------c----chhhhhhhHHHHHHHHHHH----HcCCCEEEEEecCCcCCCCccccchHHHHHHHHH
Q 023205          124 AVISCVGGFGS-------N----SYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEGKRAAET  188 (286)
Q Consensus       124 ~vi~~a~~~~~-------~----~~~~~~~~~~~~~l~~~a~----~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~  188 (286)
                      ++|||||....       +    ...+++|+.+...+++.+.    +.+ .+||++||............|+.+|...+.
T Consensus        85 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~asKaal~~  163 (272)
T PRK08589         85 VLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQG-GSIINTSSFSGQAADLYRSGYNAAKGAVIN  163 (272)
T ss_pred             EEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEeCchhhcCCCCCCchHHHHHHHHHH
Confidence            99999986421       1    2345678888876666543    334 589999995322233345689999999998


Q ss_pred             HHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHH
Q 023205          189 ELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRA  262 (286)
Q Consensus       189 ~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~  262 (286)
                      +++.      ..|++++++.||.+..+..........   ......+.....  ...|.     ..+.+++|+|++++.+
T Consensus       164 l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~---~~~~~~~~~~~~--~~~~~-----~~~~~~~~va~~~~~l  233 (272)
T PRK08589        164 FTKSIAIEYGRDGIRANAIAPGTIETPLVDKLTGTSE---DEAGKTFRENQK--WMTPL-----GRLGKPEEVAKLVVFL  233 (272)
T ss_pred             HHHHHHHHhhhcCeEEEEEecCcccCchhhhhcccch---hhHHHHHhhhhh--ccCCC-----CCCcCHHHHHHHHHHH
Confidence            7753      468999999999987553211000000   000000111000  01111     2356899999999999


Q ss_pred             hcCC--CCCCCeeEeccccc
Q 023205          263 ATDP--VFPPGIVDVHGILR  280 (286)
Q Consensus       263 l~~~--~~~~~~~~l~~~~~  280 (286)
                      +..+  ...|+.+.+.|+..
T Consensus       234 ~s~~~~~~~G~~i~vdgg~~  253 (272)
T PRK08589        234 ASDDSSFITGETIRIDGGVM  253 (272)
T ss_pred             cCchhcCcCCCEEEECCCcc
Confidence            8743  34678888877643

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.80  E-value=1.6e-18  Score=145.31  Aligned_cols=207  Identities=12%  Similarity=0.107  Sum_probs=143.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc---cccCCceeEEeccCCCHhHHHHHhc-------CCCEE
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR---DSWANNVIWHQGNLLSSDSWKEALD-------GVTAV  125 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~---~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d~v  125 (286)
                      .++++||||+|+||++++++|+++|++|+++.|+..+...   +....++.++.+|++|.++++++++       .+|++
T Consensus         8 ~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~iD~l   87 (251)
T PRK12481          8 GKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVMGHIDIL   87 (251)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            5789999999999999999999999999999886432211   1123468899999999998887765       47999


Q ss_pred             EEccccCCC----------cchhhhhhhHHHHHHHHHHHH----cC-CCEEEEEecCCcCCCCccccchHHHHHHHHHHH
Q 023205          126 ISCVGGFGS----------NSYMYKINGTANINAIRAASE----KG-VKRFVYISAADFGVANYLLQGYYEGKRAAETEL  190 (286)
Q Consensus       126 i~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~~----~~-v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~  190 (286)
                      |||||....          ....+++|+.++..+.+++..    .+ -.+||++||............|+.+|...+.+.
T Consensus        88 v~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~asK~a~~~l~  167 (251)
T PRK12481         88 INNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGGIRVPSYTASKSAVMGLT  167 (251)
T ss_pred             EECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCCCCCCcchHHHHHHHHHHH
Confidence            999986421          234568999998888777643    22 358999999532222233467999999999876


Q ss_pred             HH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhc
Q 023205          191 LT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAAT  264 (286)
Q Consensus       191 ~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~  264 (286)
                      +.      ..|++++.++||.+-.+.....   +    .. ........   ..+|.     ..+...+|+|+++..++.
T Consensus       168 ~~la~e~~~~girvn~v~PG~v~t~~~~~~---~----~~-~~~~~~~~---~~~p~-----~~~~~peeva~~~~~L~s  231 (251)
T PRK12481        168 RALATELSQYNINVNAIAPGYMATDNTAAL---R----AD-TARNEAIL---ERIPA-----SRWGTPDDLAGPAIFLSS  231 (251)
T ss_pred             HHHHHHHhhcCeEEEEEecCCCccCchhhc---c----cC-hHHHHHHH---hcCCC-----CCCcCHHHHHHHHHHHhC
Confidence            52      4689999999999865432110   0    00 00000000   12222     235789999999999996


Q ss_pred             CC--CCCCCeeEeccc
Q 023205          265 DP--VFPPGIVDVHGI  278 (286)
Q Consensus       265 ~~--~~~~~~~~l~~~  278 (286)
                      ..  ...|+++.+.|.
T Consensus       232 ~~~~~~~G~~i~vdgg  247 (251)
T PRK12481        232 SASDYVTGYTLAVDGG  247 (251)
T ss_pred             ccccCcCCceEEECCC
Confidence            43  356778888765

>PRK09242 tropinone reductase; Provisional

Probab=99.80  E-value=6.6e-18  Score=141.99  Aligned_cols=208  Identities=16%  Similarity=0.108  Sum_probs=146.0

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc---c--cc--CCceeEEeccCCCHhHHHHHhc-------
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR---D--SW--ANNVIWHQGNLLSSDSWKEALD-------  120 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~---~--~~--~~~~~~i~~Dl~d~~~~~~~~~-------  120 (286)
                      ..++++||||+|+||+++++.|+++|++|++++|+.++...   +  ..  ..++.++++|+++++++.++++       
T Consensus         8 ~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   87 (257)
T PRK09242          8 DGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHWD   87 (257)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            35799999999999999999999999999999998644211   0  01  2468889999999987766554       


Q ss_pred             CCCEEEEccccCCC----------cchhhhhhhHHHHHHHHHHH----HcCCCEEEEEecCCcCCCCccccchHHHHHHH
Q 023205          121 GVTAVISCVGGFGS----------NSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEGKRAA  186 (286)
Q Consensus       121 ~~d~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~----~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~  186 (286)
                      .+|+|||++|....          ....+.+|+.++.++++++.    +.+.++||++||............|+.+|...
T Consensus        88 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sK~a~  167 (257)
T PRK09242         88 GLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGLTHVRSGAPYGMTKAAL  167 (257)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccCCCCCCCcchHHHHHHH
Confidence            57999999986321          12456889999988888774    34557899999953333344567899999999


Q ss_pred             HHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHH
Q 023205          187 ETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAV  260 (286)
Q Consensus       187 E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~  260 (286)
                      +.++..      ..+++++.++||.+.++......       .. .........   ..|     ..-+...+|++.++.
T Consensus       168 ~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~~~~~-------~~-~~~~~~~~~---~~~-----~~~~~~~~~va~~~~  231 (257)
T PRK09242        168 LQMTRNLAVEWAEDGIRVNAVAPWYIRTPLTSGPL-------SD-PDYYEQVIE---RTP-----MRRVGEPEEVAAAVA  231 (257)
T ss_pred             HHHHHHHHHHHHHhCeEEEEEEECCCCCccccccc-------CC-hHHHHHHHh---cCC-----CCCCcCHHHHHHHHH
Confidence            987753      46899999999999776532111       00 111111111   111     122457899999999


Q ss_pred             HHhcCCC--CCCCeeEeccc
Q 023205          261 RAATDPV--FPPGIVDVHGI  278 (286)
Q Consensus       261 ~~l~~~~--~~~~~~~l~~~  278 (286)
                      .++....  ..++.+.+.++
T Consensus       232 ~l~~~~~~~~~g~~i~~~gg  251 (257)
T PRK09242        232 FLCMPAASYITGQCIAVDGG  251 (257)
T ss_pred             HHhCcccccccCCEEEECCC
Confidence            9986532  35778888765

>PRK08339 short chain dehydrogenase; Provisional

Probab=99.80  E-value=3e-18  Score=144.62  Aligned_cols=220  Identities=15%  Similarity=0.083  Sum_probs=146.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc------cccCCceeEEeccCCCHhHHHHHhc------CCC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD------GVT  123 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~------~~~~~~~~~i~~Dl~d~~~~~~~~~------~~d  123 (286)
                      .++++||||+|.||++++++|+++|++|++++|+.++...      .....++.++.+|++|+++++++++      .+|
T Consensus         8 ~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~g~iD   87 (263)
T PRK08339          8 GKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKNIGEPD   87 (263)
T ss_pred             CCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHhhCCCc
Confidence            5789999999999999999999999999999998654211      1113468899999999998887775      489


Q ss_pred             EEEEccccCCC----------cchhhhhhhHHHHHHHHHH----HHcCCCEEEEEecCCcCCCCccccchHHHHHHHHHH
Q 023205          124 AVISCVGGFGS----------NSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETE  189 (286)
Q Consensus       124 ~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a----~~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~  189 (286)
                      ++|||+|....          ....+++|+.+...+.+.+    ++.+..++|++||............|+.+|...+.+
T Consensus        88 ~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~~~~~~~~~y~asKaal~~l  167 (263)
T PRK08339         88 IFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAIKEPIPNIALSNVVRISMAGL  167 (263)
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccccCCCCcchhhHHHHHHHHHH
Confidence            99999986421          2245678877766655544    445557899999964333333455799999999886


Q ss_pred             HHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHh
Q 023205          190 LLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAA  263 (286)
Q Consensus       190 ~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l  263 (286)
                      .+.      ..|++++.|.||.+..+.............+...+......  ...+|.     ..+..++|+|++++.++
T Consensus       168 ~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~p~-----~r~~~p~dva~~v~fL~  240 (263)
T PRK08339        168 VRTLAKELGPKGITVNGIMPGIIRTDRVIQLAQDRAKREGKSVEEALQEY--AKPIPL-----GRLGEPEEIGYLVAFLA  240 (263)
T ss_pred             HHHHHHHhcccCeEEEEEEeCcCccHHHHHHHHhhhhccCCCHHHHHHHH--hccCCc-----ccCcCHHHHHHHHHHHh
Confidence            653      46899999999999654211000000000000000111111  112222     24678899999999998


Q ss_pred             cCC--CCCCCeeEeccccccc
Q 023205          264 TDP--VFPPGIVDVHGILRYS  282 (286)
Q Consensus       264 ~~~--~~~~~~~~l~~~~~~s  282 (286)
                      ..+  ...|+++.+.|+...|
T Consensus       241 s~~~~~itG~~~~vdgG~~~~  261 (263)
T PRK08339        241 SDLGSYINGAMIPVDGGRLNS  261 (263)
T ss_pred             cchhcCccCceEEECCCcccc
Confidence            653  3467888888776544

>PRK06924 short chain dehydrogenase; Provisional

Probab=99.80  E-value=1.8e-18  Score=144.81  Aligned_cols=209  Identities=16%  Similarity=0.161  Sum_probs=137.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc---cccCCceeEEeccCCCHhHHHHHhcCC---------C
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR---DSWANNVIWHQGNLLSSDSWKEALDGV---------T  123 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~---~~~~~~~~~i~~Dl~d~~~~~~~~~~~---------d  123 (286)
                      |++|+||||+|+||++++++|+++|++|++++|+..+...   .....+++++.+|++|.++++++++.+         +
T Consensus         1 ~k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~   80 (251)
T PRK06924          1 MRYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAEQYNSNLTFHSLDLQDVHELETNFNEILSSIQEDNVS   80 (251)
T ss_pred             CcEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHHhccCCceEEEEecCCCHHHHHHHHHHHHHhcCcccCC
Confidence            3689999999999999999999999999999998633211   112357889999999999988877532         1


Q ss_pred             --EEEEccccCCC-----------cchhhhhhhHHHHHHHHHHH----Hc-CCCEEEEEecCCcCCCCccccchHHHHHH
Q 023205          124 --AVISCVGGFGS-----------NSYMYKINGTANINAIRAAS----EK-GVKRFVYISAADFGVANYLLQGYYEGKRA  185 (286)
Q Consensus       124 --~vi~~a~~~~~-----------~~~~~~~~~~~~~~l~~~a~----~~-~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~  185 (286)
                        ++||++|....           ....+++|+.+...+++.+.    +. +.++||++||........+...|+.+|..
T Consensus        81 ~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sKaa  160 (251)
T PRK06924         81 SIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAKNPYFGWSAYCSSKAG  160 (251)
T ss_pred             ceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhcCCCCCcHHHhHHHHH
Confidence              78999876421           12345678877665555543    32 34589999995433344456789999999


Q ss_pred             HHHHHHH--------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHH
Q 023205          186 AETELLT--------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAK  257 (286)
Q Consensus       186 ~E~~~~~--------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~  257 (286)
                      .|.+.+.        ..+++++.++||.+-.+.........    ............   ..+     ...+.+++|+|+
T Consensus       161 ~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~----~~~~~~~~~~~~---~~~-----~~~~~~~~dva~  228 (251)
T PRK06924        161 LDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNMQAQIRSSS----KEDFTNLDRFIT---LKE-----EGKLLSPEYVAK  228 (251)
T ss_pred             HHHHHHHHHHHhhhcCCCeEEEEecCCccccHhHHHHHhcC----cccchHHHHHHH---Hhh-----cCCcCCHHHHHH
Confidence            9987752        24799999999988644311000000    000000000000   001     113589999999


Q ss_pred             HHHHHhcC-CCCCCCeeEec
Q 023205          258 VAVRAATD-PVFPPGIVDVH  276 (286)
Q Consensus       258 ~~~~~l~~-~~~~~~~~~l~  276 (286)
                      +++.++.+ +...|+.+.+.
T Consensus       229 ~~~~l~~~~~~~~G~~~~v~  248 (251)
T PRK06924        229 ALRNLLETEDFPNGEVIDID  248 (251)
T ss_pred             HHHHHHhcccCCCCCEeehh
Confidence            99999986 44456666554

>PRK07109 short chain dehydrogenase; Provisional

Probab=99.80  E-value=6.4e-18  Score=147.23  Aligned_cols=199  Identities=14%  Similarity=0.077  Sum_probs=137.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc-----cccCCceeEEeccCCCHhHHHHHhc-------CCC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------GVT  123 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~-----~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d  123 (286)
                      +++|+||||+|+||.+++++|+++|++|+++.|+.++...     .....++.++.+|++|.++++++++       .+|
T Consensus         8 ~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g~iD   87 (334)
T PRK07109          8 RQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELGPID   87 (334)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCCCCC
Confidence            5789999999999999999999999999999998643211     1113467889999999998887754       589


Q ss_pred             EEEEccccCCC----------cchhhhhhhHHHHHHHH----HHHHcCCCEEEEEecCCcCCCCccccchHHHHHHHHHH
Q 023205          124 AVISCVGGFGS----------NSYMYKINGTANINAIR----AASEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETE  189 (286)
Q Consensus       124 ~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~----~a~~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~  189 (286)
                      ++|||+|....          ....+++|+.+..++.+    .+++.+..+||++||............|+.+|...+.+
T Consensus        88 ~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~asK~a~~~~  167 (334)
T PRK07109         88 TWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALAYRSIPLQSAYCAAKHAIRGF  167 (334)
T ss_pred             EEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhhccCCCcchHHHHHHHHHHHH
Confidence            99999986421          12456777777665444    44455567899999953222233456799999988875


Q ss_pred             HHH--------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHH
Q 023205          190 LLT--------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVR  261 (286)
Q Consensus       190 ~~~--------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~  261 (286)
                      ...        ..++++++++||.+..+...               ....... ....     ....+.+++|+|++++.
T Consensus       168 ~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~~---------------~~~~~~~-~~~~-----~~~~~~~pe~vA~~i~~  226 (334)
T PRK07109        168 TDSLRCELLHDGSPVSVTMVQPPAVNTPQFD---------------WARSRLP-VEPQ-----PVPPIYQPEVVADAILY  226 (334)
T ss_pred             HHHHHHHHhhcCCCeEEEEEeCCCccCchhh---------------hhhhhcc-cccc-----CCCCCCCHHHHHHHHHH
Confidence            532        24799999999998654211               1100000 0000     11235789999999999


Q ss_pred             HhcCCCCCCCeeEeccc
Q 023205          262 AATDPVFPPGIVDVHGI  278 (286)
Q Consensus       262 ~l~~~~~~~~~~~l~~~  278 (286)
                      ++.++   .+.+.++++
T Consensus       227 ~~~~~---~~~~~vg~~  240 (334)
T PRK07109        227 AAEHP---RRELWVGGP  240 (334)
T ss_pred             HHhCC---CcEEEeCcH
Confidence            99876   445666553

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=99.80  E-value=6.4e-18  Score=139.28  Aligned_cols=192  Identities=15%  Similarity=0.073  Sum_probs=139.1

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc------cccCCceeEEeccCCCHhHHHHHhc-------
Q 023205           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD-------  120 (286)
Q Consensus        54 ~~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~------~~~~~~~~~i~~Dl~d~~~~~~~~~-------  120 (286)
                      .++++++|||||+.||..++++|.++|++|+++.|+.++...      ....-.++++.+|+++++++.++..       
T Consensus         4 ~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~~   83 (265)
T COG0300           4 MKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERGG   83 (265)
T ss_pred             CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcCC
Confidence            346799999999999999999999999999999999876321      1112357899999999998888764       


Q ss_pred             CCCEEEEccccCCC----------cchhhhhhhHHHHHHHHHH----HHcCCCEEEEEecCCcCCCCccccchHHHHHHH
Q 023205          121 GVTAVISCVGGFGS----------NSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKRAA  186 (286)
Q Consensus       121 ~~d~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a----~~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~  186 (286)
                      .+|++|+|||....          ...++++|+.+...+-.+.    .+.+-.+||.++|...-.+.+....|+++|...
T Consensus        84 ~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~p~p~~avY~ATKa~v  163 (265)
T COG0300          84 PIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLIPTPYMAVYSATKAFV  163 (265)
T ss_pred             cccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcCCCcchHHHHHHHHHH
Confidence            58999999996532          1356789998887665554    445566899999964344445567899999976


Q ss_pred             HHHHH------HhCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHH
Q 023205          187 ETELL------TRYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAV  260 (286)
Q Consensus       187 E~~~~------~~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~  260 (286)
                      -.+-.      +..|+.++.+.||.+..+... .                   ........  ....-+++.+|+|+..+
T Consensus       164 ~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f~~-~-------------------~~~~~~~~--~~~~~~~~~~~va~~~~  221 (265)
T COG0300         164 LSFSEALREELKGTGVKVTAVCPGPTRTEFFD-A-------------------KGSDVYLL--SPGELVLSPEDVAEAAL  221 (265)
T ss_pred             HHHHHHHHHHhcCCCeEEEEEecCcccccccc-c-------------------cccccccc--cchhhccCHHHHHHHHH
Confidence            55332      257899999999988644321 0                   00000000  11234789999999999


Q ss_pred             HHhcCCC
Q 023205          261 RAATDPV  267 (286)
Q Consensus       261 ~~l~~~~  267 (286)
                      ..+.+.+
T Consensus       222 ~~l~~~k  228 (265)
T COG0300         222 KALEKGK  228 (265)
T ss_pred             HHHhcCC
Confidence            9998754

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=99.80  E-value=1.2e-17  Score=141.05  Aligned_cols=216  Identities=16%  Similarity=0.142  Sum_probs=145.2

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhc-------CCCEEEE
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD-------GVTAVIS  127 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d~vi~  127 (286)
                      ..++++||||+|+||.++++.|+++|++|++++|+..+..    ..++.++.+|++|+++++++++       .+|+|||
T Consensus         8 ~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~   83 (266)
T PRK06171          8 QGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQ----HENYQFVPTDVSSAEEVNHTVAEIIEKFGRIDGLVN   83 (266)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccc----cCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            3578999999999999999999999999999998865422    2468889999999998887665       4799999


Q ss_pred             ccccCCC-------------------cchhhhhhhHHHHHHHHHHHHc----CCCEEEEEecCCcCCCCccccchHHHHH
Q 023205          128 CVGGFGS-------------------NSYMYKINGTANINAIRAASEK----GVKRFVYISAADFGVANYLLQGYYEGKR  184 (286)
Q Consensus       128 ~a~~~~~-------------------~~~~~~~~~~~~~~l~~~a~~~----~v~~~v~~Ss~~~~~~~~~~~~y~~sK~  184 (286)
                      |||....                   ....+++|+.++..+++++...    +..+||++||............|+.+|.
T Consensus        84 ~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~  163 (266)
T PRK06171         84 NAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLEGSEGQSCYAATKA  163 (266)
T ss_pred             CCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEccccccCCCCCCchhHHHHH
Confidence            9985321                   0235678999999888887643    3458999999543233344568999999


Q ss_pred             HHHHHHHH------hCCCcEEEEeeCeeec-CCCCCccccCcccc-CchHHHHHHhcccCCCCCCCCCccCCCccHHHHH
Q 023205          185 AAETELLT------RYPYGGVILRPGFIYG-TRTVGGMKLPLGVI-GSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVA  256 (286)
Q Consensus       185 ~~E~~~~~------~~g~~~~ilRp~~v~g-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva  256 (286)
                      ..+.+++.      ..|+++++++||.+.. +.....+....... +...+.+.........+|.     ..+...+|+|
T Consensus       164 a~~~l~~~la~e~~~~gi~v~~v~pG~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-----~r~~~~~eva  238 (266)
T PRK06171        164 ALNSFTRSWAKELGKHNIRVVGVAPGILEATGLRTPEYEEALAYTRGITVEQLRAGYTKTSTIPL-----GRSGKLSEVA  238 (266)
T ss_pred             HHHHHHHHHHHHhhhcCeEEEEEeccccccCCCcChhhhhhhccccCCCHHHHHhhhcccccccC-----CCCCCHHHhh
Confidence            99987653      4689999999998842 21110000000000 0000111111111012222     2457889999


Q ss_pred             HHHHHHhcCCC--CCCCeeEecccc
Q 023205          257 KVAVRAATDPV--FPPGIVDVHGIL  279 (286)
Q Consensus       257 ~~~~~~l~~~~--~~~~~~~l~~~~  279 (286)
                      +++..++....  ..|.++++.|..
T Consensus       239 ~~~~fl~s~~~~~itG~~i~vdgg~  263 (266)
T PRK06171        239 DLVCYLLSDRASYITGVTTNIAGGK  263 (266)
T ss_pred             hheeeeeccccccceeeEEEecCcc
Confidence            99999987533  457788887753

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=99.80  E-value=5.7e-18  Score=142.90  Aligned_cols=217  Identities=15%  Similarity=0.088  Sum_probs=144.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc--cccCCceeEEeccCCCHhHHHHHhc-------CCCEEE
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSWANNVIWHQGNLLSSDSWKEALD-------GVTAVI  126 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~--~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d~vi  126 (286)
                      .++++||||+|+||.+++++|+++|++|++++|+.++...  .....++.++++|++|.++++++++       .+|++|
T Consensus         6 ~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li   85 (263)
T PRK06200          6 GQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGKLDCFV   85 (263)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence            5789999999999999999999999999999998654211  1123468899999999988877664       579999


Q ss_pred             EccccCCC---------------cchhhhhhhHHHHHHHHHHHHc---CCCEEEEEecCCcCCCCccccchHHHHHHHHH
Q 023205          127 SCVGGFGS---------------NSYMYKINGTANINAIRAASEK---GVKRFVYISAADFGVANYLLQGYYEGKRAAET  188 (286)
Q Consensus       127 ~~a~~~~~---------------~~~~~~~~~~~~~~l~~~a~~~---~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~  188 (286)
                      ||||....               ....+++|+.+...+++++...   .-.++|++||............|+.+|...+.
T Consensus        86 ~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  165 (263)
T PRK06200         86 GNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASGGSMIFTLSNSSFYPGGGGPLYTASKHAVVG  165 (263)
T ss_pred             ECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcCCEEEEECChhhcCCCCCCchhHHHHHHHHH
Confidence            99986421               1234578888888888777542   12479999985322223345679999999998


Q ss_pred             HHHH-----hCCCcEEEEeeCeeecCCCCCcccc-CccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHH
Q 023205          189 ELLT-----RYPYGGVILRPGFIYGTRTVGGMKL-PLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRA  262 (286)
Q Consensus       189 ~~~~-----~~g~~~~ilRp~~v~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~  262 (286)
                      +.+.     ..+++++.+.||.+..+........ .......... ......  ...|.     ..+...+|+|++++.+
T Consensus       166 ~~~~la~el~~~Irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~p~-----~r~~~~~eva~~~~fl  237 (263)
T PRK06200        166 LVRQLAYELAPKIRVNGVAPGGTVTDLRGPASLGQGETSISDSPG-LADMIA--AITPL-----QFAPQPEDHTGPYVLL  237 (263)
T ss_pred             HHHHHHHHHhcCcEEEEEeCCccccCCcCccccCCCCcccccccc-hhHHhh--cCCCC-----CCCCCHHHHhhhhhhe
Confidence            7753     2359999999999965532111000 0000000000 011111  11222     2467889999999999


Q ss_pred             hcCC---CCCCCeeEeccccc
Q 023205          263 ATDP---VFPPGIVDVHGILR  280 (286)
Q Consensus       263 l~~~---~~~~~~~~l~~~~~  280 (286)
                      +..+   ...|+.+.+.|+..
T Consensus       238 ~s~~~~~~itG~~i~vdgG~~  258 (263)
T PRK06200        238 ASRRNSRALTGVVINADGGLG  258 (263)
T ss_pred             ecccccCcccceEEEEcCcee
Confidence            8754   24678888877643

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.80  E-value=7.5e-18  Score=139.94  Aligned_cols=201  Identities=19%  Similarity=0.145  Sum_probs=139.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc--c--ccCCceeEEeccCCCHhHHHHHhc-------CCCE
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--D--SWANNVIWHQGNLLSSDSWKEALD-------GVTA  124 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~--~--~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d~  124 (286)
                      .++|+||||+|+||.++++.|+++|++|++++|++.+...  .  ....+++++++|+.+++.++++++       ++|.
T Consensus         5 ~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   84 (238)
T PRK05786          5 GKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNAIDG   84 (238)
T ss_pred             CcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCCCCE
Confidence            5799999999999999999999999999999998654211  0  011368899999999988876654       4699


Q ss_pred             EEEccccCCCc--------chhhhhhhHHHHHHHHHHHHc--CCCEEEEEecCCc-CCCCccccchHHHHHHHHHHHHH-
Q 023205          125 VISCVGGFGSN--------SYMYKINGTANINAIRAASEK--GVKRFVYISAADF-GVANYLLQGYYEGKRAAETELLT-  192 (286)
Q Consensus       125 vi~~a~~~~~~--------~~~~~~~~~~~~~l~~~a~~~--~v~~~v~~Ss~~~-~~~~~~~~~y~~sK~~~E~~~~~-  192 (286)
                      +||+++.....        ...++.|+.+...+++.+...  .-.+||++||... .....+...|+.+|...+.++.. 
T Consensus        85 ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~~Y~~sK~~~~~~~~~~  164 (238)
T PRK05786         85 LVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMSGIYKASPDQLSYAVAKAGLAKAVEIL  164 (238)
T ss_pred             EEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecchhcccCCCCchHHHHHHHHHHHHHHHH
Confidence            99999864321        234577778877777766542  1247999998532 12233456799999988875542 


Q ss_pred             -----hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcCCC
Q 023205          193 -----RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDPV  267 (286)
Q Consensus       193 -----~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~~  267 (286)
                           ..|++++++||++++++.....            .  ...      .+   +....+++.+|++++++.++..+.
T Consensus       165 ~~~~~~~gi~v~~i~pg~v~~~~~~~~------------~--~~~------~~---~~~~~~~~~~~va~~~~~~~~~~~  221 (238)
T PRK05786        165 ASELLGRGIRVNGIAPTTISGDFEPER------------N--WKK------LR---KLGDDMAPPEDFAKVIIWLLTDEA  221 (238)
T ss_pred             HHHHhhcCeEEEEEecCccCCCCCchh------------h--hhh------hc---cccCCCCCHHHHHHHHHHHhcccc
Confidence                 3589999999999998642110            0  000      00   001235788999999999997644


Q ss_pred             --CCCCeeEecccc
Q 023205          268 --FPPGIVDVHGIL  279 (286)
Q Consensus       268 --~~~~~~~l~~~~  279 (286)
                        ..|+.+.+.|..
T Consensus       222 ~~~~g~~~~~~~~~  235 (238)
T PRK05786        222 DWVDGVVIPVDGGA  235 (238)
T ss_pred             cCccCCEEEECCcc
Confidence              356777776644

>PRK08226 short chain dehydrogenase; Provisional

Probab=99.79  E-value=1.5e-17  Score=140.35  Aligned_cols=214  Identities=17%  Similarity=0.112  Sum_probs=144.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCccc--cc--ccCCceeEEeccCCCHhHHHHHhc-------CCCE
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSL--RD--SWANNVIWHQGNLLSSDSWKEALD-------GVTA  124 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~--~~--~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d~  124 (286)
                      .++++||||+|+||+++++.|+++|++|+++.|+.....  .+  ....++.++.+|++++++++++++       .+|+
T Consensus         6 ~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   85 (263)
T PRK08226          6 GKTALITGALQGIGEGIARVFARHGANLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRIDI   85 (263)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            578999999999999999999999999999999863211  01  112467889999999998887765       4799


Q ss_pred             EEEccccCCC------c----chhhhhhhHHHHHHHHHHHH----cCCCEEEEEecCCc-CCCCccccchHHHHHHHHHH
Q 023205          125 VISCVGGFGS------N----SYMYKINGTANINAIRAASE----KGVKRFVYISAADF-GVANYLLQGYYEGKRAAETE  189 (286)
Q Consensus       125 vi~~a~~~~~------~----~~~~~~~~~~~~~l~~~a~~----~~v~~~v~~Ss~~~-~~~~~~~~~y~~sK~~~E~~  189 (286)
                      |||++|....      .    ...+++|+.+..++++++..    .+..+||++||... .........|+.+|...|.+
T Consensus        86 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~Y~~sK~a~~~~  165 (263)
T PRK08226         86 LVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVADPGETAYALTKAAIVGL  165 (263)
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhcccCCCCcchHHHHHHHHHHH
Confidence            9999996421      1    23467899999888887653    34568999998432 12223456799999999886


Q ss_pred             HHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHh
Q 023205          190 LLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAA  263 (286)
Q Consensus       190 ~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l  263 (286)
                      +..      ..+++++.++||.+.++.........  ..... +........  ..|.     ..+.+.+|+|+++..++
T Consensus       166 ~~~la~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~--~~~~~-~~~~~~~~~--~~p~-----~~~~~~~~va~~~~~l~  235 (263)
T PRK08226        166 TKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQS--NPEDP-ESVLTEMAK--AIPL-----RRLADPLEVGELAAFLA  235 (263)
T ss_pred             HHHHHHHhcccCcEEEEEecCcccCHHHHhhhhhc--cCCCc-HHHHHHHhc--cCCC-----CCCCCHHHHHHHHHHHc
Confidence            653      35899999999999876432110000  00001 111111111  1121     23568999999999988


Q ss_pred             cCC--CCCCCeeEecccc
Q 023205          264 TDP--VFPPGIVDVHGIL  279 (286)
Q Consensus       264 ~~~--~~~~~~~~l~~~~  279 (286)
                      ...  ...++++.+.|..
T Consensus       236 ~~~~~~~~g~~i~~dgg~  253 (263)
T PRK08226        236 SDESSYLTGTQNVIDGGS  253 (263)
T ss_pred             CchhcCCcCceEeECCCc
Confidence            543  3457788887754

>PRK06198 short chain dehydrogenase; Provisional

Probab=99.79  E-value=8.6e-18  Score=141.49  Aligned_cols=216  Identities=17%  Similarity=0.192  Sum_probs=147.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCe-EEEEecCCCcccc-----cccCCceeEEeccCCCHhHHHHHhc-------CC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLT-VASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------GV  122 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~-V~~l~R~~~~~~~-----~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~  122 (286)
                      .++|+||||+|+||++++++|+++|++ |+++.|+.++...     ......+.++.+|+++++++.++++       ++
T Consensus         6 ~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   85 (260)
T PRK06198          6 GKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAFGRL   85 (260)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            578999999999999999999999998 9999997543211     0113467789999999998877764       57


Q ss_pred             CEEEEccccCCC----------cchhhhhhhHHHHHHHHHHHH----cC-CCEEEEEecCCcCCCCccccchHHHHHHHH
Q 023205          123 TAVISCVGGFGS----------NSYMYKINGTANINAIRAASE----KG-VKRFVYISAADFGVANYLLQGYYEGKRAAE  187 (286)
Q Consensus       123 d~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~~----~~-v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E  187 (286)
                      |+|||++|....          ....+++|+.+..++++++.+    .+ ..+||++||............|+.+|...|
T Consensus        86 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~sK~a~~  165 (260)
T PRK06198         86 DALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQPFLAAYCASKGALA  165 (260)
T ss_pred             CEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCCCCcchhHHHHHHHH
Confidence            999999986431          123568899999888887743    22 357999998532222334568999999999


Q ss_pred             HHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHH
Q 023205          188 TELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVR  261 (286)
Q Consensus       188 ~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~  261 (286)
                      .+...      ..+++++.++||++.++........   .......++.. ..  ...+     ...+++.+|+|+++..
T Consensus       166 ~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~~~~~~~---~~~~~~~~~~~-~~--~~~~-----~~~~~~~~~~a~~~~~  234 (260)
T PRK06198        166 TLTRNAAYALLRNRIRVNGLNIGWMATEGEDRIQRE---FHGAPDDWLEK-AA--ATQP-----FGRLLDPDEVARAVAF  234 (260)
T ss_pred             HHHHHHHHHhcccCeEEEEEeeccccCcchhhhhhh---ccCCChHHHHH-Hh--ccCC-----ccCCcCHHHHHHHHHH
Confidence            87653      3579999999999987753110000   00000111111 11  0111     2346899999999999


Q ss_pred             HhcCCC--CCCCeeEeccccccc
Q 023205          262 AATDPV--FPPGIVDVHGILRYS  282 (286)
Q Consensus       262 ~l~~~~--~~~~~~~l~~~~~~s  282 (286)
                      ++.+..  ..|+++.+.+...=.
T Consensus       235 l~~~~~~~~~G~~~~~~~~~~~~  257 (260)
T PRK06198        235 LLSDESGLMTGSVIDFDQSVWGA  257 (260)
T ss_pred             HcChhhCCccCceEeECCccccc
Confidence            986543  458888888865433

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.79  E-value=8.4e-18  Score=140.78  Aligned_cols=205  Identities=15%  Similarity=0.164  Sum_probs=142.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc-----cccCCceeEEeccCCCHhHHHHHhc-------CCC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------GVT  123 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~-----~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d  123 (286)
                      .++++|||++|+||.++++.|+++|++|++++|+..+...     .....++.++++|+.|.++++++++       .+|
T Consensus         5 ~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   84 (253)
T PRK08217          5 DKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQLN   84 (253)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            4689999999999999999999999999999998643211     1113467889999999888776554       379


Q ss_pred             EEEEccccCCC-------------------cchhhhhhhHHHHHHHHHHH----Hc-CCCEEEEEecCCcCCCCccccch
Q 023205          124 AVISCVGGFGS-------------------NSYMYKINGTANINAIRAAS----EK-GVKRFVYISAADFGVANYLLQGY  179 (286)
Q Consensus       124 ~vi~~a~~~~~-------------------~~~~~~~~~~~~~~l~~~a~----~~-~v~~~v~~Ss~~~~~~~~~~~~y  179 (286)
                      +|||++|....                   ....+++|+.+...+.+.+.    +. .-.+++++||... ....+...|
T Consensus        85 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~~-~~~~~~~~Y  163 (253)
T PRK08217         85 GLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIAR-AGNMGQTNY  163 (253)
T ss_pred             EEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEccccc-cCCCCCchh
Confidence            99999985321                   01245678888876655443    22 2246888888522 223356789


Q ss_pred             HHHHHHHHHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHH
Q 023205          180 YEGKRAAETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVT  253 (286)
Q Consensus       180 ~~sK~~~E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~  253 (286)
                      +.+|...|.+++.      ..+++++.++||.+.++.....           .+.........  .|     ...+.+++
T Consensus       164 ~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~~~-----------~~~~~~~~~~~--~~-----~~~~~~~~  225 (253)
T PRK08217        164 SASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTAAM-----------KPEALERLEKM--IP-----VGRLGEPE  225 (253)
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCcccccc-----------CHHHHHHHHhc--CC-----cCCCcCHH
Confidence            9999999987653      3689999999999987643211           01111111111  11     12356889


Q ss_pred             HHHHHHHHHhcCCCCCCCeeEecccc
Q 023205          254 VVAKVAVRAATDPVFPPGIVDVHGIL  279 (286)
Q Consensus       254 Dva~~~~~~l~~~~~~~~~~~l~~~~  279 (286)
                      |+|+++..++......|++|++.|+.
T Consensus       226 ~~a~~~~~l~~~~~~~g~~~~~~gg~  251 (253)
T PRK08217        226 EIAHTVRFIIENDYVTGRVLEIDGGL  251 (253)
T ss_pred             HHHHHHHHHHcCCCcCCcEEEeCCCc
Confidence            99999999997766678999998865

>PRK07677 short chain dehydrogenase; Provisional

Probab=99.79  E-value=1.4e-17  Score=139.67  Aligned_cols=210  Identities=15%  Similarity=0.116  Sum_probs=145.2

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc-----cccCCceeEEeccCCCHhHHHHHhc-------CCCE
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------GVTA  124 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~-----~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d~  124 (286)
                      ++++||||+|+||+++++.|+++|++|++++|+..+...     .....++.++++|++|+++++++++       .+|+
T Consensus         2 k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   81 (252)
T PRK07677          2 KVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRIDA   81 (252)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCccE
Confidence            689999999999999999999999999999998653211     1113478899999999988877664       5799


Q ss_pred             EEEccccCCC----------cchhhhhhhHHHHHHHHHHHH----cC-CCEEEEEecCCcCCCCccccchHHHHHHHHHH
Q 023205          125 VISCVGGFGS----------NSYMYKINGTANINAIRAASE----KG-VKRFVYISAADFGVANYLLQGYYEGKRAAETE  189 (286)
Q Consensus       125 vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~~----~~-v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~  189 (286)
                      ||||+|....          +...+++|+.++.++++++.+    .+ ..+||++||............|+.+|...+.+
T Consensus        82 lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sKaa~~~~  161 (252)
T PRK07677         82 LINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAKAGVLAM  161 (252)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhccCCCCCcchHHHHHHHHHH
Confidence            9999985321          134678999999999988843    22 35899999853222333456799999999986


Q ss_pred             HHH-------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHH
Q 023205          190 LLT-------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRA  262 (286)
Q Consensus       190 ~~~-------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~  262 (286)
                      .+.       ..|++++.++||.+.++........       ..+ ..+...  ...+.     ..+...+|+|+++..+
T Consensus       162 ~~~la~e~~~~~gi~v~~v~PG~v~~~~~~~~~~~-------~~~-~~~~~~--~~~~~-----~~~~~~~~va~~~~~l  226 (252)
T PRK07677        162 TRTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWE-------SEE-AAKRTI--QSVPL-----GRLGTPEEIAGLAYFL  226 (252)
T ss_pred             HHHHHHHhCcccCeEEEEEeecccccccccccccC-------CHH-HHHHHh--ccCCC-----CCCCCHHHHHHHHHHH
Confidence            652       2589999999999974321111000       001 111111  11121     2367889999999998


Q ss_pred             hcCC--CCCCCeeEecccccc
Q 023205          263 ATDP--VFPPGIVDVHGILRY  281 (286)
Q Consensus       263 l~~~--~~~~~~~~l~~~~~~  281 (286)
                      +..+  ...|+.+.+.+....
T Consensus       227 ~~~~~~~~~g~~~~~~gg~~~  247 (252)
T PRK07677        227 LSDEAAYINGTCITMDGGQWL  247 (252)
T ss_pred             cCccccccCCCEEEECCCeec
Confidence            8653  356788888876543

>TIGR02415 23BDH acetoin reductases

Probab=99.79  E-value=8.4e-18  Score=141.00  Aligned_cols=217  Identities=17%  Similarity=0.150  Sum_probs=141.8

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc-----cccCCceeEEeccCCCHhHHHHHhc-------CCCE
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------GVTA  124 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~-----~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d~  124 (286)
                      ++++|||++|+||.+++++|++.|++|+++.|+.+....     .....++.++.+|++|++++.++++       .+|+
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~   80 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDV   80 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            479999999999999999999999999999997543211     1113468899999999998877654       4799


Q ss_pred             EEEccccCCC----------cchhhhhhhHHHHHHHHHHHH----cC-CCEEEEEecCCcCCCCccccchHHHHHHHHHH
Q 023205          125 VISCVGGFGS----------NSYMYKINGTANINAIRAASE----KG-VKRFVYISAADFGVANYLLQGYYEGKRAAETE  189 (286)
Q Consensus       125 vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~~----~~-v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~  189 (286)
                      ||||++....          ....+++|+.++..+++++.+    .+ ..+||++||............|+.+|...|.+
T Consensus        81 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~  160 (254)
T TIGR02415        81 MVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEGNPILSAYSSTKFAVRGL  160 (254)
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcCCCCCCcchHHHHHHHHHH
Confidence            9999986421          124567888888776665543    33 25899999853222334567899999999987


Q ss_pred             HHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHh
Q 023205          190 LLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAA  263 (286)
Q Consensus       190 ~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l  263 (286)
                      ++.      ..++++++++||.+..+........-................  ..++     ...+.+++|+++++..++
T Consensus       161 ~~~l~~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-----~~~~~~~~~~a~~~~~l~  233 (254)
T TIGR02415       161 TQTAAQELAPKGITVNAYCPGIVKTPMWEEIDEETSEIAGKPIGEGFEEFS--SEIA-----LGRPSEPEDVAGLVSFLA  233 (254)
T ss_pred             HHHHHHHhcccCeEEEEEecCcccChhhhhhhhhhhhcccCchHHHHHHHH--hhCC-----CCCCCCHHHHHHHHHhhc
Confidence            753      357999999999885543211000000000000000000000  0111     123688999999999999


Q ss_pred             cCCC--CCCCeeEeccccc
Q 023205          264 TDPV--FPPGIVDVHGILR  280 (286)
Q Consensus       264 ~~~~--~~~~~~~l~~~~~  280 (286)
                      ..+.  ..|..+.+.|...
T Consensus       234 ~~~~~~~~g~~~~~d~g~~  252 (254)
T TIGR02415       234 SEDSDYITGQSILVDGGMV  252 (254)
T ss_pred             ccccCCccCcEEEecCCcc
Confidence            8654  3467777776543

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK07576 short chain dehydrogenase; Provisional

Probab=99.79  E-value=6.6e-18  Score=142.61  Aligned_cols=212  Identities=18%  Similarity=0.130  Sum_probs=145.6

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc-----cccCCceeEEeccCCCHhHHHHHhc-------CC
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------GV  122 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~-----~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~  122 (286)
                      +.++++||||+|+||.+++++|+++|++|++++|+.+....     .....++.++.+|++|++++.++++       ++
T Consensus         8 ~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~~i   87 (264)
T PRK07576          8 AGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFGPI   87 (264)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            35799999999999999999999999999999998654211     1112357889999999988887765       46


Q ss_pred             CEEEEccccCCC----------cchhhhhhhHHHHHHHHHHHHc---CCCEEEEEecCCcCCCCccccchHHHHHHHHHH
Q 023205          123 TAVISCVGGFGS----------NSYMYKINGTANINAIRAASEK---GVKRFVYISAADFGVANYLLQGYYEGKRAAETE  189 (286)
Q Consensus       123 d~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~~~---~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~  189 (286)
                      |+||||++....          ....+++|+.++.++++++...   .-.+||++||............|+.+|...|.+
T Consensus        88 D~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g~iv~iss~~~~~~~~~~~~Y~asK~a~~~l  167 (264)
T PRK07576         88 DVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPGASIIQISAPQAFVPMPMQAHVCAAKAGVDML  167 (264)
T ss_pred             CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCEEEEECChhhccCCCCccHHHHHHHHHHHH
Confidence            999999975321          1245679999999988887542   225899999953222233456799999999987


Q ss_pred             HHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHh
Q 023205          190 LLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAA  263 (286)
Q Consensus       190 ~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l  263 (286)
                      ++.      ..|++++.++||.+.+....... .+     .  ........  ...|.     ..+...+|+|++++.++
T Consensus       168 ~~~la~e~~~~gi~v~~v~pg~~~~t~~~~~~-~~-----~--~~~~~~~~--~~~~~-----~~~~~~~dva~~~~~l~  232 (264)
T PRK07576        168 TRTLALEWGPEGIRVNSIVPGPIAGTEGMARL-AP-----S--PELQAAVA--QSVPL-----KRNGTKQDIANAALFLA  232 (264)
T ss_pred             HHHHHHHhhhcCeEEEEEecccccCcHHHhhc-cc-----C--HHHHHHHH--hcCCC-----CCCCCHHHHHHHHHHHc
Confidence            763      36799999999988643211000 00     0  00111111  11222     23578899999999999


Q ss_pred             cCCC--CCCCeeEecccccc
Q 023205          264 TDPV--FPPGIVDVHGILRY  281 (286)
Q Consensus       264 ~~~~--~~~~~~~l~~~~~~  281 (286)
                      ..+.  ..|..+.+.|...+
T Consensus       233 ~~~~~~~~G~~~~~~gg~~~  252 (264)
T PRK07576        233 SDMASYITGVVLPVDGGWSL  252 (264)
T ss_pred             ChhhcCccCCEEEECCCccc
Confidence            7543  35778888776543

>PRK08703 short chain dehydrogenase; Provisional

Probab=99.79  E-value=1.5e-17  Score=138.27  Aligned_cols=192  Identities=18%  Similarity=0.208  Sum_probs=133.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc------cccCCceeEEeccCCC--HhHHHHHh--------
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLS--SDSWKEAL--------  119 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~------~~~~~~~~~i~~Dl~d--~~~~~~~~--------  119 (286)
                      +++|+||||+|++|.++++.|+++|++|++++|+.+....      ......+.++.+|+.+  .+++.+++        
T Consensus         6 ~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~~~   85 (239)
T PRK08703          6 DKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEATQ   85 (239)
T ss_pred             CCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHHhC
Confidence            5799999999999999999999999999999998754211      1112356788899975  33444332        


Q ss_pred             cCCCEEEEccccCCC-----------cchhhhhhhHHHHHHHHHHHH----cCCCEEEEEecCCcCCCCccccchHHHHH
Q 023205          120 DGVTAVISCVGGFGS-----------NSYMYKINGTANINAIRAASE----KGVKRFVYISAADFGVANYLLQGYYEGKR  184 (286)
Q Consensus       120 ~~~d~vi~~a~~~~~-----------~~~~~~~~~~~~~~l~~~a~~----~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~  184 (286)
                      ..+|+||||||....           ....+++|+.++.++++++.+    .+..+++++||.....+......|+.+|.
T Consensus        86 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sKa  165 (239)
T PRK08703         86 GKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGETPKAYWGGFGASKA  165 (239)
T ss_pred             CCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEeccccccCCCCccchHHhHH
Confidence            457999999986321           123568999998888777743    34568999998532222334467999999


Q ss_pred             HHHHHHHH------hC-CCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHH
Q 023205          185 AAETELLT------RY-PYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAK  257 (286)
Q Consensus       185 ~~E~~~~~------~~-g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~  257 (286)
                      ..|.+++.      .. ++++++++||.+.++......                        +  +.....+...+|++.
T Consensus       166 a~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~~~~~~------------------------~--~~~~~~~~~~~~~~~  219 (239)
T PRK08703        166 ALNYLCKVAADEWERFGNLRANVLVPGPINSPQRIKSH------------------------P--GEAKSERKSYGDVLP  219 (239)
T ss_pred             HHHHHHHHHHHHhccCCCeEEEEEecCcccCccccccC------------------------C--CCCccccCCHHHHHH
Confidence            99987643      22 699999999999887532110                        0  111123578999999


Q ss_pred             HHHHHhcC--CCCCCCee
Q 023205          258 VAVRAATD--PVFPPGIV  273 (286)
Q Consensus       258 ~~~~~l~~--~~~~~~~~  273 (286)
                      .+..++..  ....|++.
T Consensus       220 ~~~~~~~~~~~~~~g~~~  237 (239)
T PRK08703        220 AFVWWASAESKGRSGEIV  237 (239)
T ss_pred             HHHHHhCccccCcCCeEe
Confidence            99999973  33445544

>PRK06196 oxidoreductase; Provisional

Probab=99.79  E-value=2.9e-18  Score=148.43  Aligned_cols=200  Identities=17%  Similarity=0.093  Sum_probs=134.7

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccc-cCCceeEEeccCCCHhHHHHHhc-------CCCEEE
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDS-WANNVIWHQGNLLSSDSWKEALD-------GVTAVI  126 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~-~~~~~~~i~~Dl~d~~~~~~~~~-------~~d~vi  126 (286)
                      ..++|+||||+|+||.+++++|+++|++|+++.|+.++..... ...++.++++|++|.++++++++       ++|+||
T Consensus        25 ~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~li  104 (315)
T PRK06196         25 SGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGIDGVEVVMLDLADLESVRAFAERFLDSGRRIDILI  104 (315)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence            3578999999999999999999999999999999865421110 11248899999999998877663       589999


Q ss_pred             EccccCCC--------cchhhhhhhHHHHHHHHH----HHHcCCCEEEEEecCCc--CC----------CCccccchHHH
Q 023205          127 SCVGGFGS--------NSYMYKINGTANINAIRA----ASEKGVKRFVYISAADF--GV----------ANYLLQGYYEG  182 (286)
Q Consensus       127 ~~a~~~~~--------~~~~~~~~~~~~~~l~~~----a~~~~v~~~v~~Ss~~~--~~----------~~~~~~~y~~s  182 (286)
                      ||||....        ....+++|+.++..+++.    +++.+..+||++||...  +.          ...+...|+.+
T Consensus       105 ~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~~~~~~~~Y~~S  184 (315)
T PRK06196        105 NNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALSSAGHRRSPIRWDDPHFTRGYDKWLAYGQS  184 (315)
T ss_pred             ECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHhccCCCCccccCccCCCChHHHHHHH
Confidence            99986422        134568899987666554    44455569999999521  10          11234579999


Q ss_pred             HHHHHHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHH
Q 023205          183 KRAAETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVA  256 (286)
Q Consensus       183 K~~~E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva  256 (286)
                      |...+.+.+.      ..|+++++++||.+.++.....   +.   .....  ....... ..++.    ..+.+.+|+|
T Consensus       185 K~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~~~~---~~---~~~~~--~~~~~~~-~~~~~----~~~~~~~~~a  251 (315)
T PRK06196        185 KTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQRHL---PR---EEQVA--LGWVDEH-GNPID----PGFKTPAQGA  251 (315)
T ss_pred             HHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCccccC---Ch---hhhhh--hhhhhhh-hhhhh----hhcCCHhHHH
Confidence            9999886642      3689999999999988753211   00   00000  0000000 00110    0245789999


Q ss_pred             HHHHHHhcCCC
Q 023205          257 KVAVRAATDPV  267 (286)
Q Consensus       257 ~~~~~~l~~~~  267 (286)
                      ..++.++..+.
T Consensus       252 ~~~~~l~~~~~  262 (315)
T PRK06196        252 ATQVWAATSPQ  262 (315)
T ss_pred             HHHHHHhcCCc
Confidence            99999997654

>PRK06172 short chain dehydrogenase; Provisional

Probab=99.79  E-value=6.9e-18  Score=141.52  Aligned_cols=209  Identities=13%  Similarity=0.027  Sum_probs=144.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc-----cccCCceeEEeccCCCHhHHHHHhc-------CCC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------GVT  123 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~-----~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d  123 (286)
                      .++|+||||+|+||.+++++|+++|++|+++.|+.++...     .....++.++.+|++|.+++.++++       .+|
T Consensus         7 ~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id   86 (253)
T PRK06172          7 GKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYGRLD   86 (253)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCC
Confidence            5799999999999999999999999999999998654211     1123468899999999988887765       459


Q ss_pred             EEEEccccCCC-----------cchhhhhhhHHHHHHHHHH----HHcCCCEEEEEecCCcCCCCccccchHHHHHHHHH
Q 023205          124 AVISCVGGFGS-----------NSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKRAAET  188 (286)
Q Consensus       124 ~vi~~a~~~~~-----------~~~~~~~~~~~~~~l~~~a----~~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~  188 (286)
                      +|||++|....           ....+++|+.+...+++.+    .+.+..++|++||............|+.+|...+.
T Consensus        87 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sKaa~~~  166 (253)
T PRK06172         87 YAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLGAAPKMSIYAASKHAVIG  166 (253)
T ss_pred             EEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCCCCchhHHHHHHHHH
Confidence            99999986421           1245678888887666543    34455689999995322233456789999999988


Q ss_pred             HHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHH
Q 023205          189 ELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRA  262 (286)
Q Consensus       189 ~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~  262 (286)
                      +.+.      ..|++++++.||.+-.+......       ... +.......  ...|.     ..+...+|+++.++.+
T Consensus       167 ~~~~la~e~~~~~i~v~~i~PG~v~t~~~~~~~-------~~~-~~~~~~~~--~~~~~-----~~~~~p~~ia~~~~~l  231 (253)
T PRK06172        167 LTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRAY-------EAD-PRKAEFAA--AMHPV-----GRIGKVEEVASAVLYL  231 (253)
T ss_pred             HHHHHHHHhcccCeEEEEEEeCCccChhhhhhc-------ccC-hHHHHHHh--ccCCC-----CCccCHHHHHHHHHHH
Confidence            6653      35799999999988544321100       000 00111111  11111     2356899999999999


Q ss_pred             hcCC--CCCCCeeEecccc
Q 023205          263 ATDP--VFPPGIVDVHGIL  279 (286)
Q Consensus       263 l~~~--~~~~~~~~l~~~~  279 (286)
                      +.+.  ...|+.+.+.|..
T Consensus       232 ~~~~~~~~~G~~i~~dgg~  250 (253)
T PRK06172        232 CSDGASFTTGHALMVDGGA  250 (253)
T ss_pred             hCccccCcCCcEEEECCCc
Confidence            9754  3468888888864

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=99.78  E-value=1.3e-17  Score=157.40  Aligned_cols=236  Identities=19%  Similarity=0.170  Sum_probs=151.0

Q ss_pred             CccccccccCCCCC---CCCCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc---c----ccCCceeEEecc
Q 023205           39 EPLKVEEAETVNVP---PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR---D----SWANNVIWHQGN  108 (286)
Q Consensus        39 ~~~~~~~~~~~~~~---~~~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~---~----~~~~~~~~i~~D  108 (286)
                      +.|..++...+.++   +..+++||||||+|+||++++++|+++|++|++++|+.+....   .    .....+..+++|
T Consensus       394 eyw~~e~~kl~~~~~~~~l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~D  473 (676)
T TIGR02632       394 EYWPLEEAKLRRMPKEKTLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMD  473 (676)
T ss_pred             hhhhhhHHhhccCCCCcCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECC
Confidence            45544443332222   2246799999999999999999999999999999998654211   1    012357789999


Q ss_pred             CCCHhHHHHHhc-------CCCEEEEccccCCC----------cchhhhhhhHHHHHHHHHH----HHcC-CCEEEEEec
Q 023205          109 LLSSDSWKEALD-------GVTAVISCVGGFGS----------NSYMYKINGTANINAIRAA----SEKG-VKRFVYISA  166 (286)
Q Consensus       109 l~d~~~~~~~~~-------~~d~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a----~~~~-v~~~v~~Ss  166 (286)
                      ++|.+++.++++       ++|+||||||....          ....+++|+.+...+.+.+    ++.+ ..+||++||
T Consensus       474 vtd~~~v~~a~~~i~~~~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS  553 (676)
T TIGR02632       474 VTDEQAVKAAFADVALAYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIAS  553 (676)
T ss_pred             CCCHHHHHHHHHHHHHhcCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeC
Confidence            999998887775       68999999996431          1234567887776665444    3333 248999999


Q ss_pred             CCcCCCCccccchHHHHHHHHHHHHH------hCCCcEEEEeeCeee-cCCCCC-ccccCc-cccCchHHHHHHhcccCC
Q 023205          167 ADFGVANYLLQGYYEGKRAAETELLT------RYPYGGVILRPGFIY-GTRTVG-GMKLPL-GVIGSPMEMVLQHAKPLS  237 (286)
Q Consensus       167 ~~~~~~~~~~~~y~~sK~~~E~~~~~------~~g~~~~ilRp~~v~-g~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~  237 (286)
                      ............|+.+|...+.+++.      ..|++++.++|+.++ |..... .+.... ...+.....+.....   
T Consensus       554 ~~a~~~~~~~~aY~aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~---  630 (676)
T TIGR02632       554 KNAVYAGKNASAYSAAKAAEAHLARCLAAEGGTYGIRVNTVNPDAVLQGSGIWDGEWREERAAAYGIPADELEEHYA---  630 (676)
T ss_pred             hhhcCCCCCCHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEECCceecCcccccccchhhhhhcccCChHHHHHHHH---
Confidence            53222233457899999999987753      358999999999987 322110 000000 000000000001000   


Q ss_pred             CCCCCCCccCCCccHHHHHHHHHHHhcCC--CCCCCeeEecccccc
Q 023205          238 QLPLVGPLFTPPVNVTVVAKVAVRAATDP--VFPPGIVDVHGILRY  281 (286)
Q Consensus       238 ~~~~~g~~~~~~i~v~Dva~~~~~~l~~~--~~~~~~~~l~~~~~~  281 (286)
                          ..+....+++.+|+|+++..++...  ...|.++++.|+..-
T Consensus       631 ----~r~~l~r~v~peDVA~av~~L~s~~~~~~TG~~i~vDGG~~~  672 (676)
T TIGR02632       631 ----KRTLLKRHIFPADIAEAVFFLASSKSEKTTGCIITVDGGVPA  672 (676)
T ss_pred             ----hcCCcCCCcCHHHHHHHHHHHhCCcccCCcCcEEEECCCchh
Confidence                0122235689999999999988643  345889999887543

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=99.78  E-value=3.8e-18  Score=148.21  Aligned_cols=156  Identities=15%  Similarity=0.090  Sum_probs=116.0

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc---c--ccCCceeEEeccCCCHhHHHHHhc-------CC
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR---D--SWANNVIWHQGNLLSSDSWKEALD-------GV  122 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~---~--~~~~~~~~i~~Dl~d~~~~~~~~~-------~~  122 (286)
                      .+++|+||||+|+||.+++++|+++|++|+++.|+.++...   +  ....++.++.+|++|.++++++++       .+
T Consensus         5 ~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   84 (322)
T PRK07453          5 AKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGKPL   84 (322)
T ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCCCc
Confidence            46789999999999999999999999999999998654211   1  112468899999999998887775       38


Q ss_pred             CEEEEccccCCC-----------cchhhhhhhHHHHHHHHHHHH----cC--CCEEEEEecCCc------CC--------
Q 023205          123 TAVISCVGGFGS-----------NSYMYKINGTANINAIRAASE----KG--VKRFVYISAADF------GV--------  171 (286)
Q Consensus       123 d~vi~~a~~~~~-----------~~~~~~~~~~~~~~l~~~a~~----~~--v~~~v~~Ss~~~------~~--------  171 (286)
                      |+||||||....           ....+++|+.++.++++++..    .+  ..|||++||...      +.        
T Consensus        85 D~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~~~~~~~~~~~~~~  164 (322)
T PRK07453         85 DALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELGGKIPIPAPAD  164 (322)
T ss_pred             cEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCccccCCccCCCCccc
Confidence            999999995421           124578999999988877654    22  359999999421      11        


Q ss_pred             ---------------------CCccccchHHHHHHHHHHHHH-------hCCCcEEEEeeCeeecCC
Q 023205          172 ---------------------ANYLLQGYYEGKRAAETELLT-------RYPYGGVILRPGFIYGTR  210 (286)
Q Consensus       172 ---------------------~~~~~~~y~~sK~~~E~~~~~-------~~g~~~~ilRp~~v~g~~  210 (286)
                                           ...+...|+.||...+.+..+       ..|+.+++++||.+++..
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~  231 (322)
T PRK07453        165 LGDLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVADTP  231 (322)
T ss_pred             hhhhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCCc
Confidence                                 012346799999987664432       248999999999998644

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=99.78  E-value=2.4e-17  Score=139.38  Aligned_cols=207  Identities=15%  Similarity=0.118  Sum_probs=139.5

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc-------cccCCceeEEeccCCCHhHH----HHHh------
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-------DSWANNVIWHQGNLLSSDSW----KEAL------  119 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~-------~~~~~~~~~i~~Dl~d~~~~----~~~~------  119 (286)
                      ++++||||+|+||.+++++|+++|++|+++.|+..+...       ......+.++.+|++|.+.+    ++++      
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~   81 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRA   81 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHc
Confidence            479999999999999999999999999998765432211       11123566789999998744    3332      


Q ss_pred             -cCCCEEEEccccCCC---------------------cchhhhhhhHHHHHHHHHHHHcC----------CCEEEEEecC
Q 023205          120 -DGVTAVISCVGGFGS---------------------NSYMYKINGTANINAIRAASEKG----------VKRFVYISAA  167 (286)
Q Consensus       120 -~~~d~vi~~a~~~~~---------------------~~~~~~~~~~~~~~l~~~a~~~~----------v~~~v~~Ss~  167 (286)
                       .++|+||||||....                     ....+++|+.+...+++++....          ..+++++||.
T Consensus        82 ~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~s~  161 (267)
T TIGR02685        82 FGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCDA  161 (267)
T ss_pred             cCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEehhh
Confidence             358999999985421                     11346889888888887754321          1368888885


Q ss_pred             CcCCCCccccchHHHHHHHHHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCC
Q 023205          168 DFGVANYLLQGYYEGKRAAETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPL  241 (286)
Q Consensus       168 ~~~~~~~~~~~y~~sK~~~E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (286)
                      ....+......|+.+|...|.+.+.      ..|+++++|+||.+..+.....         .....+..      ..+.
T Consensus       162 ~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~~~~~~---------~~~~~~~~------~~~~  226 (267)
T TIGR02685       162 MTDQPLLGFTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLPDAMPF---------EVQEDYRR------KVPL  226 (267)
T ss_pred             hccCCCcccchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCccccch---------hHHHHHHH------hCCC
Confidence            3333344567899999999987753      4689999999999865422110         01111111      1121


Q ss_pred             CCCccCCCccHHHHHHHHHHHhcCC--CCCCCeeEeccccccc
Q 023205          242 VGPLFTPPVNVTVVAKVAVRAATDP--VFPPGIVDVHGILRYS  282 (286)
Q Consensus       242 ~g~~~~~~i~v~Dva~~~~~~l~~~--~~~~~~~~l~~~~~~s  282 (286)
                      .    ..+...+|++++++.++..+  ...|+.+.+.|...++
T Consensus       227 ~----~~~~~~~~va~~~~~l~~~~~~~~~G~~~~v~gg~~~~  265 (267)
T TIGR02685       227 G----QREASAEQIADVVIFLVSPKAKYITGTCIKVDGGLSLT  265 (267)
T ss_pred             C----cCCCCHHHHHHHHHHHhCcccCCcccceEEECCceecc
Confidence            1    12468899999999999754  2457888888776554

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=99.78  E-value=1.4e-17  Score=139.72  Aligned_cols=207  Identities=12%  Similarity=0.080  Sum_probs=143.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc---cccCCceeEEeccCCCHhHHHHHhc-------CCCEE
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR---DSWANNVIWHQGNLLSSDSWKEALD-------GVTAV  125 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~---~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d~v  125 (286)
                      .++++|||++|+||.+++++|++.|++|++++|.......   .....++..+++|++|.+++.++++       .+|++
T Consensus        10 ~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~D~l   89 (253)
T PRK08993         10 GKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEFGHIDIL   89 (253)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcchHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            5789999999999999999999999999988776432111   1113467889999999988887775       47999


Q ss_pred             EEccccCC----------CcchhhhhhhHHHHHHHHHHHHc----C-CCEEEEEecCCcCCCCccccchHHHHHHHHHHH
Q 023205          126 ISCVGGFG----------SNSYMYKINGTANINAIRAASEK----G-VKRFVYISAADFGVANYLLQGYYEGKRAAETEL  190 (286)
Q Consensus       126 i~~a~~~~----------~~~~~~~~~~~~~~~l~~~a~~~----~-v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~  190 (286)
                      |||||...          .....+++|+.+..++++++...    + -.++|++||............|+.+|...|.+.
T Consensus        90 i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaa~~~~~  169 (253)
T PRK08993         90 VNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIRVPSYTASKSGVMGVT  169 (253)
T ss_pred             EECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCCCCCcchHHHHHHHHHHH
Confidence            99998642          12356789999999888876532    2 247999999532222233468999999999876


Q ss_pred             HH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhc
Q 023205          191 LT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAAT  264 (286)
Q Consensus       191 ~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~  264 (286)
                      +.      ..|++++.++||.+-.+.... . .     .. .. .....  ...+|.     ..+...+|+|++++.++.
T Consensus       170 ~~la~e~~~~gi~v~~v~pG~v~T~~~~~-~-~-----~~-~~-~~~~~--~~~~p~-----~r~~~p~eva~~~~~l~s  233 (253)
T PRK08993        170 RLMANEWAKHNINVNAIAPGYMATNNTQQ-L-R-----AD-EQ-RSAEI--LDRIPA-----GRWGLPSDLMGPVVFLAS  233 (253)
T ss_pred             HHHHHHhhhhCeEEEEEeeCcccCcchhh-h-c-----cc-hH-HHHHH--HhcCCC-----CCCcCHHHHHHHHHHHhC
Confidence            53      468999999999997553211 0 0     00 00 00000  112222     236788999999999997


Q ss_pred             CC--CCCCCeeEeccc
Q 023205          265 DP--VFPPGIVDVHGI  278 (286)
Q Consensus       265 ~~--~~~~~~~~l~~~  278 (286)
                      ..  ...|.++.+.|.
T Consensus       234 ~~~~~~~G~~~~~dgg  249 (253)
T PRK08993        234 SASDYINGYTIAVDGG  249 (253)
T ss_pred             ccccCccCcEEEECCC
Confidence            54  345777777765

>PRK07069 short chain dehydrogenase; Validated

Probab=99.78  E-value=1.2e-17  Score=139.81  Aligned_cols=208  Identities=17%  Similarity=0.146  Sum_probs=137.3

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCccccc-------cc-CCceeEEeccCCCHhHHHHHhc-------CC
Q 023205           58 KLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRD-------SW-ANNVIWHQGNLLSSDSWKEALD-------GV  122 (286)
Q Consensus        58 ~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~-------~~-~~~~~~i~~Dl~d~~~~~~~~~-------~~  122 (286)
                      +|+||||+|+||.++++.|+++|++|++++|+..+....       .. ...+.++.+|+.|.+++.++++       ++
T Consensus         1 ~ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   80 (251)
T PRK07069          1 RAFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGL   80 (251)
T ss_pred             CEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence            489999999999999999999999999999983221111       00 1234568899999998876664       57


Q ss_pred             CEEEEccccCCCc----------chhhhhhhH----HHHHHHHHHHHcCCCEEEEEecCCcCCCCccccchHHHHHHHHH
Q 023205          123 TAVISCVGGFGSN----------SYMYKINGT----ANINAIRAASEKGVKRFVYISAADFGVANYLLQGYYEGKRAAET  188 (286)
Q Consensus       123 d~vi~~a~~~~~~----------~~~~~~~~~----~~~~l~~~a~~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~  188 (286)
                      |+||||+|.....          ...+++|+.    .+.++++.+++.+.++||++||............|+.+|...+.
T Consensus        81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~~~~~~~~~~~~Y~~sK~a~~~  160 (251)
T PRK07069         81 SVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPASIVNISSVAAFKAEPDYTAYNASKAAVAS  160 (251)
T ss_pred             cEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEecChhhccCCCCCchhHHHHHHHHH
Confidence            9999999865321          234567776    55677777777777899999995322223345679999999888


Q ss_pred             HHHH--------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHH
Q 023205          189 ELLT--------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAV  260 (286)
Q Consensus       189 ~~~~--------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~  260 (286)
                      +.+.        ..+++++.++||.+.++........    ... ...+....   ..++.     ..+.+++|+|++++
T Consensus       161 ~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~~~~~~----~~~-~~~~~~~~---~~~~~-----~~~~~~~~va~~~~  227 (251)
T PRK07069        161 LTKSIALDCARRGLDVRCNSIHPTFIRTGIVDPIFQR----LGE-EEATRKLA---RGVPL-----GRLGEPDDVAHAVL  227 (251)
T ss_pred             HHHHHHHHhcccCCcEEEEEEeecccCCcchhHHhhh----ccc-hhHHHHHh---ccCCC-----CCCcCHHHHHHHHH
Confidence            6642        2358899999999987654211000    000 00111111   11121     23568999999999


Q ss_pred             HHhcCCC--CCCCeeEeccc
Q 023205          261 RAATDPV--FPPGIVDVHGI  278 (286)
Q Consensus       261 ~~l~~~~--~~~~~~~l~~~  278 (286)
                      .++..+.  ..|..+.+.+.
T Consensus       228 ~l~~~~~~~~~g~~i~~~~g  247 (251)
T PRK07069        228 YLASDESRFVTGAELVIDGG  247 (251)
T ss_pred             HHcCccccCccCCEEEECCC
Confidence            9876542  34566666554

>PRK08278 short chain dehydrogenase; Provisional

Probab=99.78  E-value=2.2e-17  Score=140.12  Aligned_cols=188  Identities=13%  Similarity=0.105  Sum_probs=134.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc------------cccCCceeEEeccCCCHhHHHHHhc---
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------------DSWANNVIWHQGNLLSSDSWKEALD---  120 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~------------~~~~~~~~~i~~Dl~d~~~~~~~~~---  120 (286)
                      +++++||||+|+||+++++.|+++|++|+++.|+.++...            .....++.++++|+++++++.++++   
T Consensus         6 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~   85 (273)
T PRK08278          6 GKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVAKAV   85 (273)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHH
Confidence            4789999999999999999999999999999998653110            0112467889999999998887765   


Q ss_pred             ----CCCEEEEccccCCC----------cchhhhhhhHHHHHHHHHHHH----cCCCEEEEEecCCcCCCC--ccccchH
Q 023205          121 ----GVTAVISCVGGFGS----------NSYMYKINGTANINAIRAASE----KGVKRFVYISAADFGVAN--YLLQGYY  180 (286)
Q Consensus       121 ----~~d~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~~----~~v~~~v~~Ss~~~~~~~--~~~~~y~  180 (286)
                          .+|+|||++|....          ....+++|+.++.++++++..    .+-.+++++||.......  .+...|+
T Consensus        86 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~Y~  165 (273)
T PRK08278         86 ERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLDPKWFAPHTAYT  165 (273)
T ss_pred             HHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhccccccCCcchhH
Confidence                57999999986421          134567999999999998864    233489999985322222  4557899


Q ss_pred             HHHHHHHHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHH
Q 023205          181 EGKRAAETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTV  254 (286)
Q Consensus       181 ~sK~~~E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D  254 (286)
                      .+|...|.+++.      ..+++++.+.|+.+.....                 ......  ..     .....+...+|
T Consensus       166 ~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~~i~t~~-----------------~~~~~~--~~-----~~~~~~~~p~~  221 (273)
T PRK08278        166 MAKYGMSLCTLGLAEEFRDDGIAVNALWPRTTIATAA-----------------VRNLLG--GD-----EAMRRSRTPEI  221 (273)
T ss_pred             HHHHHHHHHHHHHHHHhhhcCcEEEEEeCCCccccHH-----------------HHhccc--cc-----ccccccCCHHH
Confidence            999999997753      4589999999985432210                 000000  00     11123678999


Q ss_pred             HHHHHHHHhcCCC
Q 023205          255 VAKVAVRAATDPV  267 (286)
Q Consensus       255 va~~~~~~l~~~~  267 (286)
                      +|++++.++....
T Consensus       222 va~~~~~l~~~~~  234 (273)
T PRK08278        222 MADAAYEILSRPA  234 (273)
T ss_pred             HHHHHHHHhcCcc
Confidence            9999999987643

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.78  E-value=3.9e-17  Score=137.25  Aligned_cols=203  Identities=13%  Similarity=0.059  Sum_probs=140.9

Q ss_pred             CCCeEEEEcCCC--hhHHHHHHHHHHCCCeEEEEecCCCcc---------c-----c--cccCCceeEEeccCCCHhHHH
Q 023205           55 PSEKLLVLGGNG--FVGSHICREALDRGLTVASLSRSGRSS---------L-----R--DSWANNVIWHQGNLLSSDSWK  116 (286)
Q Consensus        55 ~~~~VlVtGatG--~iG~~l~~~Ll~~g~~V~~l~R~~~~~---------~-----~--~~~~~~~~~i~~Dl~d~~~~~  116 (286)
                      ++++|+||||+|  .||.+++++|+++|++|+++.|++.+.         .     .  .....++.++.+|+++.+++.
T Consensus         4 ~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~   83 (256)
T PRK12748          4 MKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPYAPN   83 (256)
T ss_pred             CCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHHHHH
Confidence            357899999995  799999999999999999999873210         0     0  011246899999999998877


Q ss_pred             HHhc-------CCCEEEEccccCCC----------cchhhhhhhHHHHHHHHHHHHc----CCCEEEEEecCCcCCCCcc
Q 023205          117 EALD-------GVTAVISCVGGFGS----------NSYMYKINGTANINAIRAASEK----GVKRFVYISAADFGVANYL  175 (286)
Q Consensus       117 ~~~~-------~~d~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~~~----~v~~~v~~Ss~~~~~~~~~  175 (286)
                      .+++       .+|+|||+||....          ....+++|+.++..+++++...    +.++||++||.....+...
T Consensus        84 ~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~  163 (256)
T PRK12748         84 RVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQSLGPMPD  163 (256)
T ss_pred             HHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCccccCCCCC
Confidence            6654       47999999986421          1234679999999998887543    3458999999532222234


Q ss_pred             ccchHHHHHHHHHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCC
Q 023205          176 LQGYYEGKRAAETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPP  249 (286)
Q Consensus       176 ~~~y~~sK~~~E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  249 (286)
                      ...|+.+|...|.+++.      ..+++++.++||.+..+....              .......  ...+     ...+
T Consensus       164 ~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~~~~--------------~~~~~~~--~~~~-----~~~~  222 (256)
T PRK12748        164 ELAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGWITE--------------ELKHHLV--PKFP-----QGRV  222 (256)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCCCCh--------------hHHHhhh--ccCC-----CCCC
Confidence            56799999999997653      358999999999876543210              0111000  0111     1124


Q ss_pred             ccHHHHHHHHHHHhcCCC--CCCCeeEeccc
Q 023205          250 VNVTVVAKVAVRAATDPV--FPPGIVDVHGI  278 (286)
Q Consensus       250 i~v~Dva~~~~~~l~~~~--~~~~~~~l~~~  278 (286)
                      ...+|+|+++..++....  ..++++++.+.
T Consensus       223 ~~~~~~a~~~~~l~~~~~~~~~g~~~~~d~g  253 (256)
T PRK12748        223 GEPVDAARLIAFLVSEEAKWITGQVIHSEGG  253 (256)
T ss_pred             cCHHHHHHHHHHHhCcccccccCCEEEecCC
Confidence            567999999998887533  45788888765

>PRK05884 short chain dehydrogenase; Provisional

Probab=99.78  E-value=1.1e-17  Score=137.58  Aligned_cols=189  Identities=12%  Similarity=0.005  Sum_probs=136.9

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhc----CCCEEEEccccC
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD----GVTAVISCVGGF  132 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~----~~d~vi~~a~~~  132 (286)
                      |+++||||+|+||+++++.|+++|++|+++.|+.++........+++++++|++|+++++++++    .+|++|||++..
T Consensus         1 m~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~id~lv~~ag~~   80 (223)
T PRK05884          1 VEVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKELDVDAIVCDNTDPASLEEARGLFPHHLDTIVNVPAPS   80 (223)
T ss_pred             CeEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCcEEecCCCCHHHHHHHHHHHhhcCcEEEECCCcc
Confidence            3799999999999999999999999999999986542211111246789999999999888775    589999998742


Q ss_pred             C---------------CcchhhhhhhHHHHHHHHHHHHc--CCCEEEEEecCCcCCCCccccchHHHHHHHHHHHHH---
Q 023205          133 G---------------SNSYMYKINGTANINAIRAASEK--GVKRFVYISAADFGVANYLLQGYYEGKRAAETELLT---  192 (286)
Q Consensus       133 ~---------------~~~~~~~~~~~~~~~l~~~a~~~--~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~~---  192 (286)
                      .               .....+++|+.+..++++++...  .-.+||++||..    ......|+.+|...+.+.+.   
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~Iv~isS~~----~~~~~~Y~asKaal~~~~~~la~  156 (223)
T PRK05884         81 WDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDHLRSGGSIISVVPEN----PPAGSAEAAIKAALSNWTAGQAA  156 (223)
T ss_pred             ccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEEEEecCC----CCCccccHHHHHHHHHHHHHHHH
Confidence            1               01245688999999888887542  125899999954    12346799999999987753   


Q ss_pred             ---hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcCC--C
Q 023205          193 ---RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDP--V  267 (286)
Q Consensus       193 ---~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~--~  267 (286)
                         ..|++++.|.||.+..+..               +   . .   ...|        .-..+|+++++..++..+  .
T Consensus       157 e~~~~gI~v~~v~PG~v~t~~~---------------~---~-~---~~~p--------~~~~~~ia~~~~~l~s~~~~~  206 (223)
T PRK05884        157 VFGTRGITINAVACGRSVQPGY---------------D---G-L---SRTP--------PPVAAEIARLALFLTTPAARH  206 (223)
T ss_pred             HhhhcCeEEEEEecCccCchhh---------------h---h-c---cCCC--------CCCHHHHHHHHHHHcCchhhc
Confidence               4689999999998853310               0   0 0   0111        127799999999988753  3


Q ss_pred             CCCCeeEecccc
Q 023205          268 FPPGIVDVHGIL  279 (286)
Q Consensus       268 ~~~~~~~l~~~~  279 (286)
                      ..|+++.+.|+.
T Consensus       207 v~G~~i~vdgg~  218 (223)
T PRK05884        207 ITGQTLHVSHGA  218 (223)
T ss_pred             cCCcEEEeCCCe
Confidence            457788877654

>PRK06139 short chain dehydrogenase; Provisional

Probab=99.78  E-value=2e-17  Score=143.61  Aligned_cols=191  Identities=16%  Similarity=0.115  Sum_probs=134.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc-----cccCCceeEEeccCCCHhHHHHHh-------cCCC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEAL-------DGVT  123 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~-----~~~~~~~~~i~~Dl~d~~~~~~~~-------~~~d  123 (286)
                      .++|+||||+|+||++++++|+++|++|+++.|+.++...     ......+.++.+|++|++++++++       ..+|
T Consensus         7 ~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD   86 (330)
T PRK06139          7 GAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGGRID   86 (330)
T ss_pred             CCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence            5789999999999999999999999999999998654211     111346778899999999888776       3589


Q ss_pred             EEEEccccCCC----------cchhhhhhhHHHHHHHHHH----HHcCCCEEEEEecCCcCCCCccccchHHHHHHHHHH
Q 023205          124 AVISCVGGFGS----------NSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETE  189 (286)
Q Consensus       124 ~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a----~~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~  189 (286)
                      ++|||||....          ....+++|+.++.++.+++    ++.+..+||++||.......+....|+.+|...+.+
T Consensus        87 ~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~~~~~p~~~~Y~asKaal~~~  166 (330)
T PRK06139         87 VWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGFAAQPYAAAYSASKFGLRGF  166 (330)
T ss_pred             EEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhcCCCCCchhHHHHHHHHHHH
Confidence            99999985421          1245789999988877665    344456899999853222223456799999976664


Q ss_pred             HH----H--h-CCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHH
Q 023205          190 LL----T--R-YPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRA  262 (286)
Q Consensus       190 ~~----~--~-~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~  262 (286)
                      ..    +  . .+++++.+.||.+..+......        .       ...  ...    ......++.+|+|++++.+
T Consensus       167 ~~sL~~El~~~~gI~V~~v~Pg~v~T~~~~~~~--------~-------~~~--~~~----~~~~~~~~pe~vA~~il~~  225 (330)
T PRK06139        167 SEALRGELADHPDIHVCDVYPAFMDTPGFRHGA--------N-------YTG--RRL----TPPPPVYDPRRVAKAVVRL  225 (330)
T ss_pred             HHHHHHHhCCCCCeEEEEEecCCccCccccccc--------c-------ccc--ccc----cCCCCCCCHHHHHHHHHHH
Confidence            43    2  2 4799999999999776431110        0       000  000    0012357899999999999


Q ss_pred             hcCCC
Q 023205          263 ATDPV  267 (286)
Q Consensus       263 l~~~~  267 (286)
                      +..++
T Consensus       226 ~~~~~  230 (330)
T PRK06139        226 ADRPR  230 (330)
T ss_pred             HhCCC
Confidence            98764

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=99.78  E-value=4.9e-18  Score=149.34  Aligned_cols=229  Identities=18%  Similarity=0.167  Sum_probs=159.4

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCC---CeEEEEecCCCcccc-----------------c---ccCCceeEEeccCCC
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRG---LTVASLSRSGRSSLR-----------------D---SWANNVIWHQGNLLS  111 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g---~~V~~l~R~~~~~~~-----------------~---~~~~~~~~i~~Dl~d  111 (286)
                      ..++|+|||||||+|+.+++.|+...   .+++++.|.++....                 +   ....++..+.||+++
T Consensus        11 ~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~~   90 (467)
T KOG1221|consen   11 KNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDISE   90 (467)
T ss_pred             CCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceeccccccC
Confidence            36799999999999999999999874   389999998765321                 0   012588999999975


Q ss_pred             H------hHHHHHhcCCCEEEEccccCCCcc---hhhhhhhHHHHHHHHHHHHc-CCCEEEEEecCC------------c
Q 023205          112 S------DSWKEALDGVTAVISCVGGFGSNS---YMYKINGTANINAIRAASEK-GVKRFVYISAAD------------F  169 (286)
Q Consensus       112 ~------~~~~~~~~~~d~vi~~a~~~~~~~---~~~~~~~~~~~~l~~~a~~~-~v~~~v~~Ss~~------------~  169 (286)
                      +      .++....+++|+|||+|+...+..   ....+|..|+.++++.|++. +.+-++++|++-            |
T Consensus        91 ~~LGis~~D~~~l~~eV~ivih~AAtvrFde~l~~al~iNt~Gt~~~l~lak~~~~l~~~vhVSTAy~n~~~~~i~E~~y  170 (467)
T KOG1221|consen   91 PDLGISESDLRTLADEVNIVIHSAATVRFDEPLDVALGINTRGTRNVLQLAKEMVKLKALVHVSTAYSNCNVGHIEEKPY  170 (467)
T ss_pred             cccCCChHHHHHHHhcCCEEEEeeeeeccchhhhhhhhhhhHhHHHHHHHHHHhhhhheEEEeehhheeccccccccccc
Confidence            4      556667789999999999987654   45689999999999999986 578999999961            1


Q ss_pred             CCCC----------------------------ccccchHHHHHHHHHHHHH-hCCCcEEEEeeCeeecCCCCCccccCcc
Q 023205          170 GVAN----------------------------YLLQGYYEGKRAAETELLT-RYPYGGVILRPGFIYGTRTVGGMKLPLG  220 (286)
Q Consensus       170 ~~~~----------------------------~~~~~y~~sK~~~E~~~~~-~~g~~~~ilRp~~v~g~~~~~~~~~~~~  220 (286)
                      ....                            ..++.|.-+|..+|.++.+ ..+++++|+||+.+......+-. -+.+
T Consensus       171 ~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~~~~lPivIiRPsiI~st~~EP~p-GWid  249 (467)
T KOG1221|consen  171 PMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKEAENLPLVIIRPSIITSTYKEPFP-GWID  249 (467)
T ss_pred             CccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhhccCCCeEEEcCCceeccccCCCC-Cccc
Confidence            1000                            1267899999999998876 56799999999999877654221 0011


Q ss_pred             ccCchHHHHHHhccc-CCCCCCCCCccCCCccHHHHHHHHHHHhcC-----CCCCCCeeEecc--ccccccc
Q 023205          221 VIGSPMEMVLQHAKP-LSQLPLVGPLFTPPVNVTVVAKVAVRAATD-----PVFPPGIVDVHG--ILRYSQK  284 (286)
Q Consensus       221 ~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~-----~~~~~~~~~l~~--~~~~s~~  284 (286)
                      .+......+....+. ...+.+..+...+.|++|.++.+++.+.-.     +.....+||++.  ..+++|.
T Consensus       250 n~~gp~g~i~g~gkGvlr~~~~d~~~~adiIPvD~vvN~~ia~~~~~~~~~~~~~~~IY~~tss~~Np~t~~  321 (467)
T KOG1221|consen  250 NLNGPDGVIIGYGKGVLRCFLVDPKAVADIIPVDMVVNAMIASAWQHAGNSKEKTPPIYHLTSSNDNPVTWG  321 (467)
T ss_pred             cCCCCceEEEEeccceEEEEEEccccccceeeHHHHHHHHHHHHHHHhccCCCCCCcEEEecccccCcccHH
Confidence            111111111111111 123334456688999999999999977621     112256999976  3444443

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.77  E-value=3.3e-17  Score=138.00  Aligned_cols=209  Identities=17%  Similarity=0.092  Sum_probs=138.0

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc-------cccCCceeEEeccCCCHhHHHHHhc-------
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-------DSWANNVIWHQGNLLSSDSWKEALD-------  120 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~-------  120 (286)
                      ..++++||||+++||++++++|+++|++|+++.|+..+...       .....++.++.+|++|+++++++++       
T Consensus         7 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   86 (260)
T PRK08416          7 KGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDEDFD   86 (260)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence            35799999999999999999999999999888765432111       1113468899999999988877664       


Q ss_pred             CCCEEEEccccCC--------C--------cchhhhhhhHHHHHHHHHH----HHcCCCEEEEEecCCcCCCCccccchH
Q 023205          121 GVTAVISCVGGFG--------S--------NSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYY  180 (286)
Q Consensus       121 ~~d~vi~~a~~~~--------~--------~~~~~~~~~~~~~~l~~~a----~~~~v~~~v~~Ss~~~~~~~~~~~~y~  180 (286)
                      .+|++|||||...        .        ....+++|+.+...+.+.+    ++.+..+||++||...-...+....|+
T Consensus        87 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  166 (260)
T PRK08416         87 RVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNLVYIENYAGHG  166 (260)
T ss_pred             CccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEeccccccCCCCcccch
Confidence            4799999997531        0        0124456666665554444    333445899999953222233456899


Q ss_pred             HHHHHHHHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHH
Q 023205          181 EGKRAAETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTV  254 (286)
Q Consensus       181 ~sK~~~E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D  254 (286)
                      .+|...+.+.+.      ..|+++++|.||.+-.+.....        ....+. .....  ...|.     ..+..++|
T Consensus       167 asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~~~~~--------~~~~~~-~~~~~--~~~~~-----~r~~~p~~  230 (260)
T PRK08416        167 TSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDALKAF--------TNYEEV-KAKTE--ELSPL-----NRMGQPED  230 (260)
T ss_pred             hhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChhhhhc--------cCCHHH-HHHHH--hcCCC-----CCCCCHHH
Confidence            999999987753      3589999999998854321100        000011 11110  01111     23578999


Q ss_pred             HHHHHHHHhcCCC--CCCCeeEecccc
Q 023205          255 VAKVAVRAATDPV--FPPGIVDVHGIL  279 (286)
Q Consensus       255 va~~~~~~l~~~~--~~~~~~~l~~~~  279 (286)
                      +|++++.++..+.  ..++.+.+.|..
T Consensus       231 va~~~~~l~~~~~~~~~G~~i~vdgg~  257 (260)
T PRK08416        231 LAGACLFLCSEKASWLTGQTIVVDGGT  257 (260)
T ss_pred             HHHHHHHHcChhhhcccCcEEEEcCCe
Confidence            9999999986532  357888887753

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=99.77  E-value=2.4e-17  Score=137.78  Aligned_cols=187  Identities=14%  Similarity=0.085  Sum_probs=131.3

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCccc------ccccCCceeEEeccCC--CHhHHHHH-------h
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSL------RDSWANNVIWHQGNLL--SSDSWKEA-------L  119 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~------~~~~~~~~~~i~~Dl~--d~~~~~~~-------~  119 (286)
                      ..++|+|||++|+||.+++++|++.|++|++++|+.++..      ......++.++.+|++  +.+++.++       +
T Consensus        11 ~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~   90 (247)
T PRK08945         11 KDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEEQF   90 (247)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHHHh
Confidence            4679999999999999999999999999999999864321      1112246778888886  45544433       3


Q ss_pred             cCCCEEEEccccCCC-----------cchhhhhhhHHHHHHHHHH----HHcCCCEEEEEecCCcCCCCccccchHHHHH
Q 023205          120 DGVTAVISCVGGFGS-----------NSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKR  184 (286)
Q Consensus       120 ~~~d~vi~~a~~~~~-----------~~~~~~~~~~~~~~l~~~a----~~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~  184 (286)
                      ..+|+|||+|+....           ....+++|+.++.++++++    ++.+.++||++||............|+.+|.
T Consensus        91 ~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~  170 (247)
T PRK08945         91 GRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGRQGRANWGAYAVSKF  170 (247)
T ss_pred             CCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhhcCCCCCCcccHHHHH
Confidence            468999999986421           1245679999988887766    3456789999999532222334567999999


Q ss_pred             HHHHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHH
Q 023205          185 AAETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKV  258 (286)
Q Consensus       185 ~~E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~  258 (286)
                      ..|.++..      ..++++++++||.+-.+.....                        .+.  .....+...+|++++
T Consensus       171 a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~~~~~~------------------------~~~--~~~~~~~~~~~~~~~  224 (247)
T PRK08945        171 ATEGMMQVLADEYQGTNLRVNCINPGGTRTAMRASA------------------------FPG--EDPQKLKTPEDIMPL  224 (247)
T ss_pred             HHHHHHHHHHHHhcccCEEEEEEecCCccCcchhhh------------------------cCc--ccccCCCCHHHHHHH
Confidence            99987653      3478999999998865421100                        000  001235788999999


Q ss_pred             HHHHhcCCC
Q 023205          259 AVRAATDPV  267 (286)
Q Consensus       259 ~~~~l~~~~  267 (286)
                      +..++..+.
T Consensus       225 ~~~~~~~~~  233 (247)
T PRK08945        225 YLYLMGDDS  233 (247)
T ss_pred             HHHHhCccc
Confidence            999886543

>PRK06484 short chain dehydrogenase; Validated

Probab=99.77  E-value=2.7e-17  Score=151.90  Aligned_cols=211  Identities=14%  Similarity=0.124  Sum_probs=148.8

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCccc--ccccCCceeEEeccCCCHhHHHHHhc-------CCCEE
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSL--RDSWANNVIWHQGNLLSSDSWKEALD-------GVTAV  125 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~--~~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d~v  125 (286)
                      ..++++||||+|+||.+++++|+++|++|+++.|+.++..  .+....++..+.+|++|++++.++++       .+|++
T Consensus       268 ~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l  347 (520)
T PRK06484        268 SPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARWGRLDVL  347 (520)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            4679999999999999999999999999999999864421  11123456778999999998887764       47999


Q ss_pred             EEccccCCC-----------cchhhhhhhHHHHHHHHHHHHc--CCCEEEEEecCCcCCCCccccchHHHHHHHHHHHHH
Q 023205          126 ISCVGGFGS-----------NSYMYKINGTANINAIRAASEK--GVKRFVYISAADFGVANYLLQGYYEGKRAAETELLT  192 (286)
Q Consensus       126 i~~a~~~~~-----------~~~~~~~~~~~~~~l~~~a~~~--~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~~  192 (286)
                      |||||....           ....+++|+.++.++++++...  +-.+||++||............|+.+|...+.+.+.
T Consensus       348 i~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaal~~l~~~  427 (520)
T PRK06484        348 VNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIASLLALPPRNAYCASKAAVTMLSRS  427 (520)
T ss_pred             EECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhhcCCCCCCchhHHHHHHHHHHHHH
Confidence            999986421           1345789999999998887653  235899999953333334557899999999987653


Q ss_pred             ------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcCC
Q 023205          193 ------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDP  266 (286)
Q Consensus       193 ------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~  266 (286)
                            ..|+++++|.||.+..+......       ... ........  ...|.     ..+..++|+|++++.++..+
T Consensus       428 la~e~~~~gI~vn~v~PG~v~t~~~~~~~-------~~~-~~~~~~~~--~~~~~-----~~~~~~~dia~~~~~l~s~~  492 (520)
T PRK06484        428 LACEWAPAGIRVNTVAPGYIETPAVLALK-------ASG-RADFDSIR--RRIPL-----GRLGDPEEVAEAIAFLASPA  492 (520)
T ss_pred             HHHHhhhhCeEEEEEEeCCccCchhhhhc-------ccc-HHHHHHHH--hcCCC-----CCCcCHHHHHHHHHHHhCcc
Confidence                  45899999999999765421110       000 00001110  11121     13568899999999998753


Q ss_pred             --CCCCCeeEeccccc
Q 023205          267 --VFPPGIVDVHGILR  280 (286)
Q Consensus       267 --~~~~~~~~l~~~~~  280 (286)
                        ...|+.+.+.|+..
T Consensus       493 ~~~~~G~~i~vdgg~~  508 (520)
T PRK06484        493 ASYVNGATLTVDGGWT  508 (520)
T ss_pred             ccCccCcEEEECCCcc
Confidence              24678898887653

>PRK07062 short chain dehydrogenase; Provisional

Probab=99.77  E-value=4.7e-17  Score=137.43  Aligned_cols=218  Identities=12%  Similarity=0.025  Sum_probs=142.2

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc------ccc-CCceeEEeccCCCHhHHHHHhc-------
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSW-ANNVIWHQGNLLSSDSWKEALD-------  120 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~------~~~-~~~~~~i~~Dl~d~~~~~~~~~-------  120 (286)
                      ..++++||||+|+||.+++++|+++|++|++++|+.++...      ... ..++.++.+|++|.++++++++       
T Consensus         7 ~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   86 (265)
T PRK07062          7 EGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEARFG   86 (265)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence            35789999999999999999999999999999998654211      111 2367889999999988876653       


Q ss_pred             CCCEEEEccccCCC----------cchhhhhhhHHHHHHHHHH----HHcCCCEEEEEecCCcCCCCccccchHHHHHHH
Q 023205          121 GVTAVISCVGGFGS----------NSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKRAA  186 (286)
Q Consensus       121 ~~d~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a----~~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~  186 (286)
                      .+|++|||||....          ....+++|+.+...+++.+    ++.+..+||++||...-........|+.+|...
T Consensus        87 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~asKaal  166 (265)
T PRK07062         87 GVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNSLLALQPEPHMVATSAARAGL  166 (265)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEeccccccCCCCCchHhHHHHHHH
Confidence            57999999986421          1244567777776665554    334456999999953222233446799999988


Q ss_pred             HHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHH
Q 023205          187 ETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAV  260 (286)
Q Consensus       187 E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~  260 (286)
                      +.+.+.      ..|++++.++||.+..+.....+...........++. ........+|.     ..+...+|+|++++
T Consensus       167 ~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~p~-----~r~~~p~~va~~~~  240 (265)
T PRK07062        167 LNLVKSLATELAPKGVRVNSILLGLVESGQWRRRYEARADPGQSWEAWT-AALARKKGIPL-----GRLGRPDEAARALF  240 (265)
T ss_pred             HHHHHHHHHHhhhcCeEEEEEecCccccchhhhHHHHhhccCCChHHHH-HHHhhcCCCCc-----CCCCCHHHHHHHHH
Confidence            876542      4689999999999865432111000000000001111 11101112222     23578899999999


Q ss_pred             HHhcCC--CCCCCeeEeccc
Q 023205          261 RAATDP--VFPPGIVDVHGI  278 (286)
Q Consensus       261 ~~l~~~--~~~~~~~~l~~~  278 (286)
                      .++...  ...|+++.+.|+
T Consensus       241 ~L~s~~~~~~tG~~i~vdgg  260 (265)
T PRK07062        241 FLASPLSSYTTGSHIDVSGG  260 (265)
T ss_pred             HHhCchhcccccceEEEcCc
Confidence            988643  346788888876

>PRK09072 short chain dehydrogenase; Provisional

Probab=99.77  E-value=2.2e-17  Score=139.30  Aligned_cols=189  Identities=15%  Similarity=0.113  Sum_probs=133.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc---c-ccCCceeEEeccCCCHhHHHHHhc------CCCEE
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR---D-SWANNVIWHQGNLLSSDSWKEALD------GVTAV  125 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~---~-~~~~~~~~i~~Dl~d~~~~~~~~~------~~d~v  125 (286)
                      .++|+||||+|+||.+++++|+++|++|++++|+.++...   + ....++.++.+|+.|++.+.++++      .+|+|
T Consensus         5 ~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~id~l   84 (263)
T PRK09072          5 DKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMGGINVL   84 (263)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcCCCCEE
Confidence            4689999999999999999999999999999998654211   1 113478899999999988776654      57999


Q ss_pred             EEccccCCC----------cchhhhhhhHHHHHHHHHHHH----cCCCEEEEEecCCcCCCCccccchHHHHHHHHHHHH
Q 023205          126 ISCVGGFGS----------NSYMYKINGTANINAIRAASE----KGVKRFVYISAADFGVANYLLQGYYEGKRAAETELL  191 (286)
Q Consensus       126 i~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~~----~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~  191 (286)
                      ||+||....          ....+++|+.++.++++.+..    .+..++|++||............|+.+|...+.++.
T Consensus        85 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~  164 (263)
T PRK09072         85 INNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGSIGYPGYASYCASKFALRGFSE  164 (263)
T ss_pred             EECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhCcCCCCccHHHHHHHHHHHHHH
Confidence            999986432          124567999999988887753    344679999884322222334579999998877554


Q ss_pred             H------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcC
Q 023205          192 T------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATD  265 (286)
Q Consensus       192 ~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~  265 (286)
                      .      ..+++++++.||.+..+.....               ....  ....      .....+++|+|++++.++++
T Consensus       165 ~l~~~~~~~~i~v~~v~Pg~~~t~~~~~~---------------~~~~--~~~~------~~~~~~~~~va~~i~~~~~~  221 (263)
T PRK09072        165 ALRRELADTGVRVLYLAPRATRTAMNSEA---------------VQAL--NRAL------GNAMDDPEDVAAAVLQAIEK  221 (263)
T ss_pred             HHHHHhcccCcEEEEEecCcccccchhhh---------------cccc--cccc------cCCCCCHHHHHHHHHHHHhC
Confidence            2      4679999999998865422100               0000  0000      11357889999999999987


Q ss_pred             CC
Q 023205          266 PV  267 (286)
Q Consensus       266 ~~  267 (286)
                      ..
T Consensus       222 ~~  223 (263)
T PRK09072        222 ER  223 (263)
T ss_pred             CC
Confidence            64

>PRK07578 short chain dehydrogenase; Provisional

Probab=99.77  E-value=4e-17  Score=131.96  Aligned_cols=178  Identities=18%  Similarity=0.093  Sum_probs=130.8

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhc---CCCEEEEccccCC
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD---GVTAVISCVGGFG  133 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~---~~d~vi~~a~~~~  133 (286)
                      |+++||||+|+||.++++.|.++ ++|+++.|+..            .+++|++|.++++++++   ++|+|||++|...
T Consensus         1 ~~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~------------~~~~D~~~~~~~~~~~~~~~~id~lv~~ag~~~   67 (199)
T PRK07578          1 MKILVIGASGTIGRAVVAELSKR-HEVITAGRSSG------------DVQVDITDPASIRALFEKVGKVDAVVSAAGKVH   67 (199)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC------------ceEecCCChHHHHHHHHhcCCCCEEEECCCCCC
Confidence            47999999999999999999999 99999998742            36889999999888776   6899999998642


Q ss_pred             C----------cchhhhhhhHHHHHHHHHHHHc--CCCEEEEEecCCcCCCCccccchHHHHHHHHHHHHH-----hCCC
Q 023205          134 S----------NSYMYKINGTANINAIRAASEK--GVKRFVYISAADFGVANYLLQGYYEGKRAAETELLT-----RYPY  196 (286)
Q Consensus       134 ~----------~~~~~~~~~~~~~~l~~~a~~~--~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~~-----~~g~  196 (286)
                      .          ....+++|+.++.++++++...  +..+|+++||.......+....|+.+|...+.+.+.     ..|+
T Consensus        68 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~gi  147 (199)
T PRK07578         68 FAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTSGILSDEPIPGGASAATVNGALEGFVKAAALELPRGI  147 (199)
T ss_pred             CCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcccccCCCCCCchHHHHHHHHHHHHHHHHHHHccCCe
Confidence            1          1244578899999999887653  234799999853222334456799999998886653     3589


Q ss_pred             cEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcCCCCCCCeeEe
Q 023205          197 GGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDPVFPPGIVDV  275 (286)
Q Consensus       197 ~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~l  275 (286)
                      +++.+.||.+-.+...                ...      .++.     ..+++.+|+|++++.++... ..|+++++
T Consensus       148 ~v~~i~Pg~v~t~~~~----------------~~~------~~~~-----~~~~~~~~~a~~~~~~~~~~-~~g~~~~~  198 (199)
T PRK07578        148 RINVVSPTVLTESLEK----------------YGP------FFPG-----FEPVPAARVALAYVRSVEGA-QTGEVYKV  198 (199)
T ss_pred             EEEEEcCCcccCchhh----------------hhh------cCCC-----CCCCCHHHHHHHHHHHhccc-eeeEEecc
Confidence            9999999988433110                000      0111     23589999999999999764 34667664

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=99.77  E-value=1.5e-16  Score=134.06  Aligned_cols=210  Identities=14%  Similarity=0.086  Sum_probs=141.5

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc------cccCCceeEEeccCCCHhHHHHHhc-------C
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD-------G  121 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~------~~~~~~~~~i~~Dl~d~~~~~~~~~-------~  121 (286)
                      ..++++||||+|+||.++++.|+++|++|+++.|+..+...      .....++.++.+|++|.+++.++++       .
T Consensus         6 ~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~   85 (261)
T PRK08936          6 EGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEFGT   85 (261)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            35799999999999999999999999999988886433111      1113467889999999998877664       4


Q ss_pred             CCEEEEccccCCC----------cchhhhhhhHHHHHHHHH----HHHcC-CCEEEEEecCCcCCCCccccchHHHHHHH
Q 023205          122 VTAVISCVGGFGS----------NSYMYKINGTANINAIRA----ASEKG-VKRFVYISAADFGVANYLLQGYYEGKRAA  186 (286)
Q Consensus       122 ~d~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~----a~~~~-v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~  186 (286)
                      +|++||++|....          ....+++|+.+...+++.    +.+.+ -.++|++||.......+....|+.+|...
T Consensus        86 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sKaa~  165 (261)
T PRK08936         86 LDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQIPWPLFVHYAASKGGV  165 (261)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccccCCCCCCcccHHHHHHH
Confidence            7999999986421          123467888777655444    44444 35899999964333334557899999887


Q ss_pred             HHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHH
Q 023205          187 ETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAV  260 (286)
Q Consensus       187 E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~  260 (286)
                      +.+...      ..|+++++++||.+..+......       ... ..... ..  ...|.     ..+...+|+++++.
T Consensus       166 ~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~-------~~~-~~~~~-~~--~~~~~-----~~~~~~~~va~~~~  229 (261)
T PRK08936        166 KLMTETLAMEYAPKGIRVNNIGPGAINTPINAEKF-------ADP-KQRAD-VE--SMIPM-----GYIGKPEEIAAVAA  229 (261)
T ss_pred             HHHHHHHHHHHhhcCeEEEEEEECcCCCCcccccc-------CCH-HHHHH-HH--hcCCC-----CCCcCHHHHHHHHH
Confidence            775542      46899999999999776432111       000 11111 11  11221     23578899999999


Q ss_pred             HHhcCCC--CCCCeeEeccccc
Q 023205          261 RAATDPV--FPPGIVDVHGILR  280 (286)
Q Consensus       261 ~~l~~~~--~~~~~~~l~~~~~  280 (286)
                      .++..+.  ..+..+.+.+...
T Consensus       230 ~l~s~~~~~~~G~~i~~d~g~~  251 (261)
T PRK08936        230 WLASSEASYVTGITLFADGGMT  251 (261)
T ss_pred             HHcCcccCCccCcEEEECCCcc
Confidence            9887533  4566777776543

>PRK07831 short chain dehydrogenase; Provisional

Probab=99.77  E-value=1.1e-16  Score=135.07  Aligned_cols=206  Identities=19%  Similarity=0.095  Sum_probs=143.5

Q ss_pred             CCeEEEEcCCC-hhHHHHHHHHHHCCCeEEEEecCCCcccc------ccc-CCceeEEeccCCCHhHHHHHhc-------
Q 023205           56 SEKLLVLGGNG-FVGSHICREALDRGLTVASLSRSGRSSLR------DSW-ANNVIWHQGNLLSSDSWKEALD-------  120 (286)
Q Consensus        56 ~~~VlVtGatG-~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~------~~~-~~~~~~i~~Dl~d~~~~~~~~~-------  120 (286)
                      .++++||||+| .||+++++.|+++|++|++.+|+.++...      ... ..++.++++|++++++++++++       
T Consensus        17 ~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   96 (262)
T PRK07831         17 GKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVERLG   96 (262)
T ss_pred             CCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            57899999997 79999999999999999999987654211      101 1368899999999988887664       


Q ss_pred             CCCEEEEccccCCC----------cchhhhhhhHHHHHHHHHHHH----cC-CCEEEEEecCCcCCCCccccchHHHHHH
Q 023205          121 GVTAVISCVGGFGS----------NSYMYKINGTANINAIRAASE----KG-VKRFVYISAADFGVANYLLQGYYEGKRA  185 (286)
Q Consensus       121 ~~d~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~~----~~-v~~~v~~Ss~~~~~~~~~~~~y~~sK~~  185 (286)
                      .+|+||||+|....          ....+++|+.+...+++.+..    .+ -.++|++||............|+.+|..
T Consensus        97 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~sKaa  176 (262)
T PRK07831         97 RLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWRAQHGQAHYAAAKAG  176 (262)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCCCCcchHHHHHH
Confidence            57999999986421          124567888888887777643    22 3578998885322233455679999999


Q ss_pred             HHHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHH
Q 023205          186 AETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVA  259 (286)
Q Consensus       186 ~E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~  259 (286)
                      .+.+.+.      ..|+++++++||.+..+.....  .       ..+.+.....   ..+     ...+...+|+|+++
T Consensus       177 l~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~~~--~-------~~~~~~~~~~---~~~-----~~r~~~p~~va~~~  239 (262)
T PRK07831        177 VMALTRCSALEAAEYGVRINAVAPSIAMHPFLAKV--T-------SAELLDELAA---REA-----FGRAAEPWEVANVI  239 (262)
T ss_pred             HHHHHHHHHHHhCccCeEEEEEeeCCccCcccccc--c-------CHHHHHHHHh---cCC-----CCCCcCHHHHHHHH
Confidence            9987753      3689999999999987643211  0       0111111111   111     12357889999999


Q ss_pred             HHHhcCCC--CCCCeeEeccc
Q 023205          260 VRAATDPV--FPPGIVDVHGI  278 (286)
Q Consensus       260 ~~~l~~~~--~~~~~~~l~~~  278 (286)
                      +.++....  ..|+++.+.++
T Consensus       240 ~~l~s~~~~~itG~~i~v~~~  260 (262)
T PRK07831        240 AFLASDYSSYLTGEVVSVSSQ  260 (262)
T ss_pred             HHHcCchhcCcCCceEEeCCC
Confidence            99887543  46788887764

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=99.77  E-value=2.4e-17  Score=139.06  Aligned_cols=216  Identities=19%  Similarity=0.123  Sum_probs=143.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc--cccCCceeEEeccCCCHhHHHHHhc-------CCCEEE
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSWANNVIWHQGNLLSSDSWKEALD-------GVTAVI  126 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~--~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d~vi  126 (286)
                      .++++||||+|+||.+++++|+++|++|++++|+.+....  .....++.++++|+.|.+++.++++       .+|++|
T Consensus         5 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li   84 (262)
T TIGR03325         5 GEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFGKIDCLI   84 (262)
T ss_pred             CcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHHhCCCCEEE
Confidence            5799999999999999999999999999999998643211  1123468889999999888776664       579999


Q ss_pred             EccccCC--------C-------cchhhhhhhHHHHHHHHHHHHc---CCCEEEEEecCCcCCCCccccchHHHHHHHHH
Q 023205          127 SCVGGFG--------S-------NSYMYKINGTANINAIRAASEK---GVKRFVYISAADFGVANYLLQGYYEGKRAAET  188 (286)
Q Consensus       127 ~~a~~~~--------~-------~~~~~~~~~~~~~~l~~~a~~~---~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~  188 (286)
                      ||||...        +       ....+++|+.++.++++++.+.   .-.++|++||...-........|+.+|...+.
T Consensus        85 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~  164 (262)
T TIGR03325        85 PNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASRGSVIFTISNAGFYPNGGGPLYTAAKHAVVG  164 (262)
T ss_pred             ECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcCCCEEEEeccceecCCCCCchhHHHHHHHHH
Confidence            9998531        0       1245788999999998888653   12468888884322222344579999999998


Q ss_pred             HHHH-----hCCCcEEEEeeCeeecCCCCCccc-cCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHH
Q 023205          189 ELLT-----RYPYGGVILRPGFIYGTRTVGGMK-LPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRA  262 (286)
Q Consensus       189 ~~~~-----~~g~~~~ilRp~~v~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~  262 (286)
                      +.+.     ...++++.+.||.+..+....... ......... . ......  ..+|.     ..+...+|+|++++.+
T Consensus       165 l~~~la~e~~~~irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~-~-~~~~~~--~~~p~-----~r~~~p~eva~~~~~l  235 (262)
T TIGR03325       165 LVKELAFELAPYVRVNGVAPGGMSSDLRGPKSLGMADKSISTV-P-LGDMLK--SVLPI-----GRMPDAEEYTGAYVFF  235 (262)
T ss_pred             HHHHHHHhhccCeEEEEEecCCCcCCCcccccccccccccccc-c-hhhhhh--hcCCC-----CCCCChHHhhhheeee
Confidence            7753     123899999999997653221100 000000000 0 001011  11222     2356889999999998


Q ss_pred             hcCCC---CCCCeeEeccccc
Q 023205          263 ATDPV---FPPGIVDVHGILR  280 (286)
Q Consensus       263 l~~~~---~~~~~~~l~~~~~  280 (286)
                      +..+.   ..|.++.+.|...
T Consensus       236 ~s~~~~~~~tG~~i~vdgg~~  256 (262)
T TIGR03325       236 ATRGDTVPATGAVLNYDGGMG  256 (262)
T ss_pred             ecCCCcccccceEEEecCCee
Confidence            86532   3678888877643

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.77  E-value=2.4e-17  Score=137.38  Aligned_cols=178  Identities=15%  Similarity=0.094  Sum_probs=124.2

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccccCC-
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFG-  133 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~~~-  133 (286)
                      ++++++||||+|+||++++++|+++|++|++++|+..+...........++.+|++|.+++.+.+.++|++|||||... 
T Consensus        13 ~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~iDilVnnAG~~~~   92 (245)
T PRK12367         13 QGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSESNDESPNEWIKWECGKEESLDKQLASLDVLILNHGINPG   92 (245)
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhhhccCCCeEEEeeCCCHHHHHHhcCCCCEEEECCccCCc
Confidence            4579999999999999999999999999999999863222111112236788999999999999999999999998632 


Q ss_pred             ------CcchhhhhhhHHHHHHHHHHHHc-------CCCEEEEEecCCcCCCCccccchHHHHHHHHHHH---H------
Q 023205          134 ------SNSYMYKINGTANINAIRAASEK-------GVKRFVYISAADFGVANYLLQGYYEGKRAAETEL---L------  191 (286)
Q Consensus       134 ------~~~~~~~~~~~~~~~l~~~a~~~-------~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~---~------  191 (286)
                            .....+++|+.++.++++++...       +-..++..||. .+........|+.||...+.+.   .      
T Consensus        93 ~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~-a~~~~~~~~~Y~aSKaal~~~~~l~~~l~~e~  171 (245)
T PRK12367         93 GRQDPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSE-AEIQPALSPSYEISKRLIGQLVSLKKNLLDKN  171 (245)
T ss_pred             CCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEecc-cccCCCCCchhHHHHHHHHHHHHHHHHHHHhh
Confidence                  12456789999999998877542       11234344442 1222223456999999975422   1      


Q ss_pred             HhCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcCCC
Q 023205          192 TRYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDPV  267 (286)
Q Consensus       192 ~~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~~  267 (286)
                      ...++.++.+.||.+..+..                            +      ...++.+|+|+.++.++.+++
T Consensus       172 ~~~~i~v~~~~pg~~~t~~~----------------------------~------~~~~~~~~vA~~i~~~~~~~~  213 (245)
T PRK12367        172 ERKKLIIRKLILGPFRSELN----------------------------P------IGIMSADFVAKQILDQANLGL  213 (245)
T ss_pred             cccccEEEEecCCCcccccC----------------------------c------cCCCCHHHHHHHHHHHHhcCC
Confidence            13577888888876532100                            0      014688999999999997654

>PRK07832 short chain dehydrogenase; Provisional

Probab=99.77  E-value=5.1e-17  Score=137.77  Aligned_cols=199  Identities=13%  Similarity=0.017  Sum_probs=132.4

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc---c---ccCCceeEEeccCCCHhHHHHHhc-------CCC
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR---D---SWANNVIWHQGNLLSSDSWKEALD-------GVT  123 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~---~---~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d  123 (286)
                      |+++||||+|+||.+++++|+++|++|+++.|+.+....   +   .....+.++.+|+.|++++.++++       .+|
T Consensus         1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMD   80 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence            479999999999999999999999999999997643111   0   111234567899999988776654       479


Q ss_pred             EEEEccccCCC----------cchhhhhhhHHHHHHHHHHHH-----cCCCEEEEEecCCcCCCCccccchHHHHHHHHH
Q 023205          124 AVISCVGGFGS----------NSYMYKINGTANINAIRAASE-----KGVKRFVYISAADFGVANYLLQGYYEGKRAAET  188 (286)
Q Consensus       124 ~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~~-----~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~  188 (286)
                      +||||+|....          ....+++|+.+..++++++..     ....+||++||............|+.+|...+.
T Consensus        81 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a~~~  160 (272)
T PRK07832         81 VVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLVALPWHAAYSASKFGLRG  160 (272)
T ss_pred             EEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccCCCCCCcchHHHHHHHHH
Confidence            99999986421          134578999999999888642     223589999995322222345679999997776


Q ss_pred             HHH------HhCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHH
Q 023205          189 ELL------TRYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRA  262 (286)
Q Consensus       189 ~~~------~~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~  262 (286)
                      +..      ...++++++++||.+.++..........+......+....            ......++.+|+|++++.+
T Consensus       161 ~~~~l~~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~vA~~~~~~  228 (272)
T PRK07832        161 LSEVLRFDLARHGIGVSVVVPGAVKTPLVNTVEIAGVDREDPRVQKWVD------------RFRGHAVTPEKAAEKILAG  228 (272)
T ss_pred             HHHHHHHHhhhcCcEEEEEecCcccCcchhcccccccCcchhhHHHHHH------------hcccCCCCHHHHHHHHHHH
Confidence            553      2468999999999998764321100000000000000000            0012357999999999999


Q ss_pred             hcCCC
Q 023205          263 ATDPV  267 (286)
Q Consensus       263 l~~~~  267 (286)
                      +..++
T Consensus       229 ~~~~~  233 (272)
T PRK07832        229 VEKNR  233 (272)
T ss_pred             HhcCC
Confidence            96543

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=99.76  E-value=3.9e-17  Score=135.74  Aligned_cols=201  Identities=16%  Similarity=0.120  Sum_probs=138.1

Q ss_pred             EEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc------cccCCceeEEeccCCCHhHHHHHhc-------CCCEE
Q 023205           59 LLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD-------GVTAV  125 (286)
Q Consensus        59 VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~------~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d~v  125 (286)
                      |+||||+|+||.++++.|+++|++|+++.|..++...      .....++.++.+|++|.+++.++++       .+|++
T Consensus         1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~l   80 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYYGV   80 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            6899999999999999999999999999876433211      1113468899999999988877654       46999


Q ss_pred             EEccccCCC----------cchhhhhhhHHHHHHHHHHH-----HcCCCEEEEEecCCcCCCCccccchHHHHHHHHHHH
Q 023205          126 ISCVGGFGS----------NSYMYKINGTANINAIRAAS-----EKGVKRFVYISAADFGVANYLLQGYYEGKRAAETEL  190 (286)
Q Consensus       126 i~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~-----~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~  190 (286)
                      ||++|....          ....+++|+.++.++++++.     +.+..+||++||............|+.+|...+.+.
T Consensus        81 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~~~  160 (239)
T TIGR01831        81 VLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSGVMGNRGQVNYSAAKAGLIGAT  160 (239)
T ss_pred             EECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchhhccCCCCCcchHHHHHHHHHHH
Confidence            999986421          12456789999988887652     234468999999432222234567999999887655


Q ss_pred             HH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhc
Q 023205          191 LT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAAT  264 (286)
Q Consensus       191 ~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~  264 (286)
                      +.      ..|++++.++||.+.++.....           .+......   ..+|.     ..+...+|+|+++..++.
T Consensus       161 ~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-----------~~~~~~~~---~~~~~-----~~~~~~~~va~~~~~l~~  221 (239)
T TIGR01831       161 KALAVELAKRKITVNCIAPGLIDTEMLAEV-----------EHDLDEAL---KTVPM-----NRMGQPAEVASLAGFLMS  221 (239)
T ss_pred             HHHHHHHhHhCeEEEEEEEccCccccchhh-----------hHHHHHHH---hcCCC-----CCCCCHHHHHHHHHHHcC
Confidence            42      3689999999999876543210           11111111   11221     234688999999999987


Q ss_pred             CCC--CCCCeeEeccc
Q 023205          265 DPV--FPPGIVDVHGI  278 (286)
Q Consensus       265 ~~~--~~~~~~~l~~~  278 (286)
                      .+.  ..+....+.|.
T Consensus       222 ~~~~~~~g~~~~~~gg  237 (239)
T TIGR01831       222 DGASYVTRQVISVNGG  237 (239)
T ss_pred             chhcCccCCEEEecCC
Confidence            543  34566666654

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.76  E-value=6.4e-17  Score=131.41  Aligned_cols=221  Identities=15%  Similarity=0.081  Sum_probs=153.5

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc---------cccCCceeEEeccCCCHhHHHHHhcC--CC
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR---------DSWANNVIWHQGNLLSSDSWKEALDG--VT  123 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~---------~~~~~~~~~i~~Dl~d~~~~~~~~~~--~d  123 (286)
                      ++|+.||||-||+-|++|++.|+++||+|.++.|+.+....         .....+++++.+|++|...+.++++.  .|
T Consensus         1 ~~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v~Pd   80 (345)
T COG1089           1 MGKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEVQPD   80 (345)
T ss_pred             CCceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhcCch
Confidence            36789999999999999999999999999999998544211         12234689999999999999999985  59


Q ss_pred             EEEEccccC------CCcchhhhhhhHHHHHHHHHHHHcCC--CEEEEEecC-CcCC----------CCccccchHHHHH
Q 023205          124 AVISCVGGF------GSNSYMYKINGTANINAIRAASEKGV--KRFVYISAA-DFGV----------ANYLLQGYYEGKR  184 (286)
Q Consensus       124 ~vi~~a~~~------~~~~~~~~~~~~~~~~l~~~a~~~~v--~~~v~~Ss~-~~~~----------~~~~~~~y~~sK~  184 (286)
                      -|+|+|+.+      ..+....+++..|+.+++++.+-.+.  -||...||+ .||.          +-.|.++|+.+|.
T Consensus        81 EIYNLaAQS~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~~~~~rfYQAStSE~fG~v~~~pq~E~TPFyPrSPYAvAKl  160 (345)
T COG1089          81 EIYNLAAQSHVGVSFEQPEYTADVDAIGTLRLLEAIRILGEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKL  160 (345)
T ss_pred             hheeccccccccccccCcceeeeechhHHHHHHHHHHHhCCcccEEEecccHHhhcCcccCccccCCCCCCCCHHHHHHH
Confidence            999999865      34556678899999999999998764  378888885 3443          2357899999999


Q ss_pred             HHHHHHH---HhCCCcEEEEeeCeeecCCCCCccccCccccC-chHHHHHHhcccCC-CCCCC-CCccCCCccHHHHHHH
Q 023205          185 AAETELL---TRYPYGGVILRPGFIYGTRTVGGMKLPLGVIG-SPMEMVLQHAKPLS-QLPLV-GPLFTPPVNVTVVAKV  258 (286)
Q Consensus       185 ~~E~~~~---~~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~-g~~~~~~i~v~Dva~~  258 (286)
                      .+.-+..   +.+|+-.+   -|.+|......   .+..++- .+...+.+...... .+.+. =|..+||-+..|..++
T Consensus       161 Ya~W~tvNYResYgl~Ac---nGILFNHESP~---Rge~FVTRKIt~ava~Ik~G~q~~l~lGNldAkRDWG~A~DYVe~  234 (345)
T COG1089         161 YAYWITVNYRESYGLFAC---NGILFNHESPL---RGETFVTRKITRAVARIKLGLQDKLYLGNLDAKRDWGHAKDYVEA  234 (345)
T ss_pred             HHHheeeehHhhcCceee---cceeecCCCCC---CccceehHHHHHHHHHHHccccceEEeccccccccccchHHHHHH
Confidence            9886442   45664322   24444221110   1111111 11111222222222 22222 1458999999999999


Q ss_pred             HHHHhcCCCCCCCeeEecccccccc
Q 023205          259 AVRAATDPVFPPGIVDVHGILRYSQ  283 (286)
Q Consensus       259 ~~~~l~~~~~~~~~~~l~~~~~~s~  283 (286)
                      ++..++.+.  +..|.++.++..|-
T Consensus       235 mwlmLQq~~--PddyViATg~t~sV  257 (345)
T COG1089         235 MWLMLQQEE--PDDYVIATGETHSV  257 (345)
T ss_pred             HHHHHccCC--CCceEEecCceeeH
Confidence            999999877  77899888776553

>PRK05872 short chain dehydrogenase; Provisional

Probab=99.76  E-value=7.9e-17  Score=138.27  Aligned_cols=199  Identities=13%  Similarity=0.076  Sum_probs=137.4

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc--ccc--CCceeEEeccCCCHhHHHHHhc-------CCC
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSW--ANNVIWHQGNLLSSDSWKEALD-------GVT  123 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~--~~~--~~~~~~i~~Dl~d~~~~~~~~~-------~~d  123 (286)
                      ..++|+||||+|+||.++++.|.++|++|+++.|+.++...  +..  ...+..+.+|++|.++++++++       .+|
T Consensus         8 ~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id   87 (296)
T PRK05872          8 AGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFGGID   87 (296)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            35799999999999999999999999999999998654211  111  2345667799999988877654       579


Q ss_pred             EEEEccccCCC----------cchhhhhhhHHHHHHHHHHHHc---CCCEEEEEecCCcCCCCccccchHHHHHHHHHHH
Q 023205          124 AVISCVGGFGS----------NSYMYKINGTANINAIRAASEK---GVKRFVYISAADFGVANYLLQGYYEGKRAAETEL  190 (286)
Q Consensus       124 ~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~~~---~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~  190 (286)
                      +||||||....          ....+++|+.++.++++.+...   ...+||++||............|+.+|...+.+.
T Consensus        88 ~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaal~~~~  167 (296)
T PRK05872         88 VVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERRGYVLQVSSLAAFAAAPGMAAYCASKAGVEAFA  167 (296)
T ss_pred             EEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHhhcCCCCCchHHHHHHHHHHHHH
Confidence            99999996421          1345789999999988887542   2358999999532222334568999999999876


Q ss_pred             HH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhc
Q 023205          191 LT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAAT  264 (286)
Q Consensus       191 ~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~  264 (286)
                      ..      ..|+.++++.||++..+......       .. ...+...... .+.|     ...+++.+|+|++++.++.
T Consensus       168 ~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~-------~~-~~~~~~~~~~-~~~p-----~~~~~~~~~va~~i~~~~~  233 (296)
T PRK05872        168 NALRLEVAHHGVTVGSAYLSWIDTDLVRDAD-------AD-LPAFRELRAR-LPWP-----LRRTTSVEKCAAAFVDGIE  233 (296)
T ss_pred             HHHHHHHHHHCcEEEEEecCcccchhhhhcc-------cc-chhHHHHHhh-CCCc-----ccCCCCHHHHHHHHHHHHh
Confidence            53      46899999999998655322110       00 0111111110 0111     1245789999999999997


Q ss_pred             CCC
Q 023205          265 DPV  267 (286)
Q Consensus       265 ~~~  267 (286)
                      +..
T Consensus       234 ~~~  236 (296)
T PRK05872        234 RRA  236 (296)
T ss_pred             cCC
Confidence            653

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.76  E-value=1.4e-16  Score=131.09  Aligned_cols=189  Identities=14%  Similarity=0.099  Sum_probs=135.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHh---c--CCCEEEEccc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEAL---D--GVTAVISCVG  130 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~---~--~~d~vi~~a~  130 (286)
                      |++++||||+|+||++++++|+++|++|++++|+.++.. .....+++++.+|++|.+.+++++   .  .+|+|||++|
T Consensus         1 ~~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~-~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi~~ag   79 (222)
T PRK06953          1 MKTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALA-ALQALGAEALALDVADPASVAGLAWKLDGEALDAAVYVAG   79 (222)
T ss_pred             CceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHH-HHHhccceEEEecCCCHHHHHHHHHHhcCCCCCEEEECCC
Confidence            468999999999999999999999999999999865421 112235678999999999888764   2  3799999998


Q ss_pred             cCCC------------cchhhhhhhHHHHHHHHHHHHc---CCCEEEEEecCC--cCCCC-ccccchHHHHHHHHHHHHH
Q 023205          131 GFGS------------NSYMYKINGTANINAIRAASEK---GVKRFVYISAAD--FGVAN-YLLQGYYEGKRAAETELLT  192 (286)
Q Consensus       131 ~~~~------------~~~~~~~~~~~~~~l~~~a~~~---~v~~~v~~Ss~~--~~~~~-~~~~~y~~sK~~~E~~~~~  192 (286)
                      ....            ....++.|+.++.++++++...   .-.+++++||..  ++... .+...|+.+|...+.+++.
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~  159 (222)
T PRK06953         80 VYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSSRMGSIGDATGTTGWLYRASKAALNDALRA  159 (222)
T ss_pred             cccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcCcccccccccCCCccccHHhHHHHHHHHHH
Confidence            7521            1346789999999998888642   224789998842  33221 1223699999999987764


Q ss_pred             ----hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcCCC-
Q 023205          193 ----RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDPV-  267 (286)
Q Consensus       193 ----~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~~-  267 (286)
                          ..+++++.++||++..+...                               +  ..++..++.++.++.++.... 
T Consensus       160 ~~~~~~~i~v~~v~Pg~i~t~~~~-------------------------------~--~~~~~~~~~~~~~~~~~~~~~~  206 (222)
T PRK06953        160 ASLQARHATCIALHPGWVRTDMGG-------------------------------A--QAALDPAQSVAGMRRVIAQATR  206 (222)
T ss_pred             HhhhccCcEEEEECCCeeecCCCC-------------------------------C--CCCCCHHHHHHHHHHHHHhcCc
Confidence                34789999999998754310                               0  113577888888888775432 


Q ss_pred             -CCCCeeEeccc
Q 023205          268 -FPPGIVDVHGI  278 (286)
Q Consensus       268 -~~~~~~~l~~~  278 (286)
                       ..+..|...+.
T Consensus       207 ~~~~~~~~~~~~  218 (222)
T PRK06953        207 RDNGRFFQYDGV  218 (222)
T ss_pred             ccCceEEeeCCc
Confidence             33455555543

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=99.75  E-value=6.3e-17  Score=136.23  Aligned_cols=218  Identities=15%  Similarity=0.049  Sum_probs=139.4

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc---cc-cCCceeEEeccCCCHhHHHHHhc-------CCCEE
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR---DS-WANNVIWHQGNLLSSDSWKEALD-------GVTAV  125 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~---~~-~~~~~~~i~~Dl~d~~~~~~~~~-------~~d~v  125 (286)
                      |+++||||+|.||+.++++|+++|++|++++|++++...   +. ...++.++.+|++|+++++++++       .+|+|
T Consensus         1 m~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~l   80 (259)
T PRK08340          1 MNVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDAL   80 (259)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            479999999999999999999999999999998654211   10 12367889999999998887764       58999


Q ss_pred             EEccccCCC-----c-------chhhhhhhHHHHHHHH----HHH-HcCCCEEEEEecCCcCCCCccccchHHHHHHHHH
Q 023205          126 ISCVGGFGS-----N-------SYMYKINGTANINAIR----AAS-EKGVKRFVYISAADFGVANYLLQGYYEGKRAAET  188 (286)
Q Consensus       126 i~~a~~~~~-----~-------~~~~~~~~~~~~~l~~----~a~-~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~  188 (286)
                      |||||....     .       ...+.+|+.+...+.+    ... +.+..+||++||............|+.+|...+.
T Consensus        81 i~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sKaa~~~  160 (259)
T PRK08340         81 VWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKEPMPPLVLADVTRAGLVQ  160 (259)
T ss_pred             EECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCCCCCCchHHHHHHHHHHH
Confidence            999986421     0       1223456555443333    222 2344689999996433334455689999999998


Q ss_pred             HHHH------hCCCcEEEEeeCeeecCCCCCccccCccccC-chHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHH
Q 023205          189 ELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIG-SPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVR  261 (286)
Q Consensus       189 ~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~  261 (286)
                      +.+.      ..|++++.+.||.+-.+..........+..+ ...+......  ...+|.     ..+...+|+|+++..
T Consensus       161 ~~~~la~e~~~~gI~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~p~-----~r~~~p~dva~~~~f  233 (259)
T PRK08340        161 LAKGVSRTYGGKGIRAYTVLLGSFDTPGARENLARIAEERGVSFEETWEREV--LERTPL-----KRTGRWEELGSLIAF  233 (259)
T ss_pred             HHHHHHHHhCCCCEEEEEeccCcccCccHHHHHHhhhhccCCchHHHHHHHH--hccCCc-----cCCCCHHHHHHHHHH
Confidence            7653      4689999999998865532110000000000 0000000000  011221     236788999999999


Q ss_pred             HhcCC--CCCCCeeEecccccc
Q 023205          262 AATDP--VFPPGIVDVHGILRY  281 (286)
Q Consensus       262 ~l~~~--~~~~~~~~l~~~~~~  281 (286)
                      ++..+  ...|.++.+.|....
T Consensus       234 L~s~~~~~itG~~i~vdgg~~~  255 (259)
T PRK08340        234 LLSENAEYMLGSTIVFDGAMTR  255 (259)
T ss_pred             HcCcccccccCceEeecCCcCC
Confidence            98754  346778888876543

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.75  E-value=2.9e-16  Score=131.69  Aligned_cols=208  Identities=13%  Similarity=0.054  Sum_probs=142.5

Q ss_pred             CCeEEEEcCC--ChhHHHHHHHHHHCCCeEEEEecCCCcc--cccccCCceeEEeccCCCHhHHHHHhc-------CCCE
Q 023205           56 SEKLLVLGGN--GFVGSHICREALDRGLTVASLSRSGRSS--LRDSWANNVIWHQGNLLSSDSWKEALD-------GVTA  124 (286)
Q Consensus        56 ~~~VlVtGat--G~iG~~l~~~Ll~~g~~V~~l~R~~~~~--~~~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d~  124 (286)
                      .++++||||+  +.||..++++|+++|++|++..|+....  ..+.....+.++++|++|+++++++++       .+|+
T Consensus         7 ~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~   86 (252)
T PRK06079          7 GKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQNDRMKKSLQKLVDEEDLLVECDVASDESIERAFATIKERVGKIDG   86 (252)
T ss_pred             CCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCchHHHHHHHhhccCceeEEeCCCCCHHHHHHHHHHHHHHhCCCCE
Confidence            5789999999  7999999999999999999999873211  111223467889999999988876653       4799


Q ss_pred             EEEccccCCC--------------cchhhhhhhHHHHHHHHHHHHcC--CCEEEEEecCCcCCCCccccchHHHHHHHHH
Q 023205          125 VISCVGGFGS--------------NSYMYKINGTANINAIRAASEKG--VKRFVYISAADFGVANYLLQGYYEGKRAAET  188 (286)
Q Consensus       125 vi~~a~~~~~--------------~~~~~~~~~~~~~~l~~~a~~~~--v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~  188 (286)
                      +|||||....              ....+++|+.+...+.+++...-  -.++|++||............|+.+|...+.
T Consensus        87 lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~~~~~~~Y~asKaal~~  166 (252)
T PRK06079         87 IVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFGSERAIPNYNVMGIAKAALES  166 (252)
T ss_pred             EEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEeccCccccCCcchhhHHHHHHHHH
Confidence            9999986421              12356788888888877775431  2489999985322222345679999999998


Q ss_pred             HHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHH
Q 023205          189 ELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRA  262 (286)
Q Consensus       189 ~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~  262 (286)
                      +.+.      ..|+++++|.||.+-.+.....        ....+.......   ..|.     ..+...+|+|+++..+
T Consensus       167 l~~~la~el~~~gI~vn~i~PG~v~T~~~~~~--------~~~~~~~~~~~~---~~p~-----~r~~~pedva~~~~~l  230 (252)
T PRK06079        167 SVRYLARDLGKKGIRVNAISAGAVKTLAVTGI--------KGHKDLLKESDS---RTVD-----GVGVTIEEVGNTAAFL  230 (252)
T ss_pred             HHHHHHHHhhhcCcEEEEEecCcccccccccC--------CChHHHHHHHHh---cCcc-----cCCCCHHHHHHHHHHH
Confidence            7753      4689999999999965432110        000011111111   1221     2367889999999999


Q ss_pred             hcCC--CCCCCeeEecccc
Q 023205          263 ATDP--VFPPGIVDVHGIL  279 (286)
Q Consensus       263 l~~~--~~~~~~~~l~~~~  279 (286)
                      +...  ...|+++.+.|..
T Consensus       231 ~s~~~~~itG~~i~vdgg~  249 (252)
T PRK06079        231 LSDLSTGVTGDIIYVDKGV  249 (252)
T ss_pred             hCcccccccccEEEeCCce
Confidence            9753  3457788877753

>PRK06940 short chain dehydrogenase; Provisional

Probab=99.75  E-value=1.1e-16  Score=135.85  Aligned_cols=212  Identities=17%  Similarity=0.060  Sum_probs=142.7

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc---c--ccCCceeEEeccCCCHhHHHHHhc------CCC
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR---D--SWANNVIWHQGNLLSSDSWKEALD------GVT  123 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~---~--~~~~~~~~i~~Dl~d~~~~~~~~~------~~d  123 (286)
                      |+++++|||+ |+||+++++.|. +|++|++++|+.++...   +  ....++.++.+|++|.+++.++++      .+|
T Consensus         1 ~~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~id   78 (275)
T PRK06940          1 MKEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTLGPVT   78 (275)
T ss_pred             CCCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCCC
Confidence            4678999998 799999999996 79999999998643211   1  112367889999999998887764      489


Q ss_pred             EEEEccccCC---CcchhhhhhhHHHHHHHHHHHHc--CCCEEEEEecCCcCCCC-------------------------
Q 023205          124 AVISCVGGFG---SNSYMYKINGTANINAIRAASEK--GVKRFVYISAADFGVAN-------------------------  173 (286)
Q Consensus       124 ~vi~~a~~~~---~~~~~~~~~~~~~~~l~~~a~~~--~v~~~v~~Ss~~~~~~~-------------------------  173 (286)
                      ++|||||...   .....+++|+.++.++++++...  .-.++|++||.......                         
T Consensus        79 ~li~nAG~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (275)
T PRK06940         79 GLVHTAGVSPSQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQSGHRLPALTAEQERALATTPTEELLSLPFLQ  158 (275)
T ss_pred             EEEECCCcCCchhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEecccccCcccchhhhcccccccccccccccccc
Confidence            9999999753   34567899999999998887653  11356777774211110                         


Q ss_pred             -----ccccchHHHHHHHHHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCC
Q 023205          174 -----YLLQGYYEGKRAAETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLV  242 (286)
Q Consensus       174 -----~~~~~y~~sK~~~E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (286)
                           .....|+.+|...+.+.+.      ..|++++.|.||.+..+........      ..-+......   ...|. 
T Consensus       159 ~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~~~~~~~~------~~~~~~~~~~---~~~p~-  228 (275)
T PRK06940        159 PDAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPLAQDELNG------PRGDGYRNMF---AKSPA-  228 (275)
T ss_pred             ccccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCccchhhhcC------CchHHHHHHh---hhCCc-
Confidence                 1245799999998876642      4689999999999976532111000      0000111111   11222 


Q ss_pred             CCccCCCccHHHHHHHHHHHhcCC--CCCCCeeEeccccccc
Q 023205          243 GPLFTPPVNVTVVAKVAVRAATDP--VFPPGIVDVHGILRYS  282 (286)
Q Consensus       243 g~~~~~~i~v~Dva~~~~~~l~~~--~~~~~~~~l~~~~~~s  282 (286)
                          ..+...+|+|+++..++...  ...|..+.+.|....+
T Consensus       229 ----~r~~~peeia~~~~fL~s~~~~~itG~~i~vdgg~~~~  266 (275)
T PRK06940        229 ----GRPGTPDEIAALAEFLMGPRGSFITGSDFLVDGGATAS  266 (275)
T ss_pred             ----ccCCCHHHHHHHHHHHcCcccCcccCceEEEcCCeEEE
Confidence                23678999999999988643  3467888888775433

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.75  E-value=9.4e-17  Score=138.41  Aligned_cols=203  Identities=16%  Similarity=0.100  Sum_probs=138.9

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc----c--ccCCceeEEeccCCCHhHHHHHhc------CC
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR----D--SWANNVIWHQGNLLSSDSWKEALD------GV  122 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~----~--~~~~~~~~i~~Dl~d~~~~~~~~~------~~  122 (286)
                      ..++++||||+|+||++++++|+++|++|++.+|.......    +  ....++.++.+|++|.+.+.++++      .+
T Consensus        11 ~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~~g~i   90 (306)
T PRK07792         11 SGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVGLGGL   90 (306)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHhCCC
Confidence            46799999999999999999999999999999876432111    1  113468899999999988877664      58


Q ss_pred             CEEEEccccCCC----------cchhhhhhhHHHHHHHHHHHHc--------C---CCEEEEEecCCcCCCCccccchHH
Q 023205          123 TAVISCVGGFGS----------NSYMYKINGTANINAIRAASEK--------G---VKRFVYISAADFGVANYLLQGYYE  181 (286)
Q Consensus       123 d~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~~~--------~---v~~~v~~Ss~~~~~~~~~~~~y~~  181 (286)
                      |+||||||....          ....+++|+.++.++++++...        +   ..+||++||...-........|+.
T Consensus        91 D~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a  170 (306)
T PRK07792         91 DIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGPVGQANYGA  170 (306)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCcccccCCCCCchHHH
Confidence            999999987532          1245689999999888876421        1   148999998532222234567999


Q ss_pred             HHHHHHHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHH
Q 023205          182 GKRAAETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVV  255 (286)
Q Consensus       182 sK~~~E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dv  255 (286)
                      +|...+.+...      ..|++++++.|+.  .......              +..      ..+........+++++|+
T Consensus       171 sKaal~~l~~~la~e~~~~gI~vn~i~Pg~--~t~~~~~--------------~~~------~~~~~~~~~~~~~~pe~v  228 (306)
T PRK07792        171 AKAGITALTLSAARALGRYGVRANAICPRA--RTAMTAD--------------VFG------DAPDVEAGGIDPLSPEHV  228 (306)
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEECCCC--CCchhhh--------------hcc------ccchhhhhccCCCCHHHH
Confidence            99999987642      4689999999973  1111000              000      000000012235689999


Q ss_pred             HHHHHHHhcCC--CCCCCeeEecccc
Q 023205          256 AKVAVRAATDP--VFPPGIVDVHGIL  279 (286)
Q Consensus       256 a~~~~~~l~~~--~~~~~~~~l~~~~  279 (286)
                      |.++..++...  ...|++|.+.|+.
T Consensus       229 a~~v~~L~s~~~~~~tG~~~~v~gg~  254 (306)
T PRK07792        229 VPLVQFLASPAAAEVNGQVFIVYGPM  254 (306)
T ss_pred             HHHHHHHcCccccCCCCCEEEEcCCe
Confidence            99999988653  3467888888764

>PRK06125 short chain dehydrogenase; Provisional

Probab=99.75  E-value=1.4e-16  Score=134.18  Aligned_cols=216  Identities=16%  Similarity=0.129  Sum_probs=145.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc------cccCCceeEEeccCCCHhHHHHHhc---CCCEEE
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD---GVTAVI  126 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~------~~~~~~~~~i~~Dl~d~~~~~~~~~---~~d~vi  126 (286)
                      .++++|||++|.+|.++++.|+++|++|++++|+.++...      .....++.++.+|++|++++.++++   .+|++|
T Consensus         7 ~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id~lv   86 (259)
T PRK06125          7 GKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEAGDIDILV   86 (259)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHhCCCCEEE
Confidence            5799999999999999999999999999999998654211      1113468899999999998887765   589999


Q ss_pred             EccccCCC----------cchhhhhhhHHHHHHHHHHH----HcCCCEEEEEecCCcCCCCccccchHHHHHHHHHHHHH
Q 023205          127 SCVGGFGS----------NSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLT  192 (286)
Q Consensus       127 ~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~----~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~~  192 (286)
                      ||+|....          ....+++|+.+...+++.+.    +.+-.++|++||............|..+|...+.+.+.
T Consensus        87 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~ask~al~~~~~~  166 (259)
T PRK06125         87 NNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVIGAAGENPDADYICGSAGNAALMAFTRA  166 (259)
T ss_pred             ECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEecCccccCCCCCchHhHHHHHHHHHHHHH
Confidence            99986421          13456788888887777663    33345899999854333333455689999998886653


Q ss_pred             ------hCCCcEEEEeeCeeecCCCCCccccC-ccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcC
Q 023205          193 ------RYPYGGVILRPGFIYGTRTVGGMKLP-LGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATD  265 (286)
Q Consensus       193 ------~~g~~~~ilRp~~v~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~  265 (286)
                            ..|++++.+.||.+..+......... ...++. .+.+...   ...+|.     ..+.+++|+|++++.++..
T Consensus       167 la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~-~~~~~~~---~~~~~~-----~~~~~~~~va~~~~~l~~~  237 (259)
T PRK06125        167 LGGKSLDDGVRVVGVNPGPVATDRMLTLLKGRARAELGD-ESRWQEL---LAGLPL-----GRPATPEEVADLVAFLASP  237 (259)
T ss_pred             HHHHhCccCeEEEEEecCccccHHHHHHHHhhhhcccCC-HHHHHHH---hccCCc-----CCCcCHHHHHHHHHHHcCc
Confidence                  36899999999998755211000000 000000 0001110   011222     2357899999999999875


Q ss_pred             C--CCCCCeeEeccccc
Q 023205          266 P--VFPPGIVDVHGILR  280 (286)
Q Consensus       266 ~--~~~~~~~~l~~~~~  280 (286)
                      .  ...|..+.+.|+..
T Consensus       238 ~~~~~~G~~i~vdgg~~  254 (259)
T PRK06125        238 RSGYTSGTVVTVDGGIS  254 (259)
T ss_pred             hhccccCceEEecCCee
Confidence            3  34678888888754

>PRK07791 short chain dehydrogenase; Provisional

Probab=99.74  E-value=1.9e-16  Score=135.20  Aligned_cols=207  Identities=12%  Similarity=0.089  Sum_probs=140.2

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCC---------Cccc---cc--ccCCceeEEeccCCCHhHHHHHhc
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSG---------RSSL---RD--SWANNVIWHQGNLLSSDSWKEALD  120 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~---------~~~~---~~--~~~~~~~~i~~Dl~d~~~~~~~~~  120 (286)
                      ..++++||||++.||.++++.|+++|++|+++.|+.         +...   .+  ....++.++.+|++|.+++.++++
T Consensus         5 ~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~   84 (286)
T PRK07791          5 DGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLVD   84 (286)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHH
Confidence            357899999999999999999999999999988765         1110   01  112357789999999988776653


Q ss_pred             -------CCCEEEEccccCCC----------cchhhhhhhHHHHHHHHHHHH----cC------CCEEEEEecCCcCCCC
Q 023205          121 -------GVTAVISCVGGFGS----------NSYMYKINGTANINAIRAASE----KG------VKRFVYISAADFGVAN  173 (286)
Q Consensus       121 -------~~d~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~~----~~------v~~~v~~Ss~~~~~~~  173 (286)
                             .+|++|||||....          ....+++|+.++..+.+++..    ..      -.+||++||...-...
T Consensus        85 ~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~  164 (286)
T PRK07791         85 AAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGLQGS  164 (286)
T ss_pred             HHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhhCcCC
Confidence                   57999999986431          135578999998888777642    11      1489999995322233


Q ss_pred             ccccchHHHHHHHHHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccC
Q 023205          174 YLLQGYYEGKRAAETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFT  247 (286)
Q Consensus       174 ~~~~~y~~sK~~~E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  247 (286)
                      .....|+.+|...+.+.+.      ..|++++.|.|| +..+..           ......+..      ..+   ....
T Consensus       165 ~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg-~~T~~~-----------~~~~~~~~~------~~~---~~~~  223 (286)
T PRK07791        165 VGQGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA-ARTRMT-----------ETVFAEMMA------KPE---EGEF  223 (286)
T ss_pred             CCchhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC-CCCCcc-----------hhhHHHHHh------cCc---cccc
Confidence            3456899999999886653      478999999998 421110           000010100      011   1112


Q ss_pred             CCccHHHHHHHHHHHhcCC--CCCCCeeEeccccccc
Q 023205          248 PPVNVTVVAKVAVRAATDP--VFPPGIVDVHGILRYS  282 (286)
Q Consensus       248 ~~i~v~Dva~~~~~~l~~~--~~~~~~~~l~~~~~~s  282 (286)
                      .+...+|+|++++.++...  ...|+.+.+.|+...-
T Consensus       224 ~~~~pedva~~~~~L~s~~~~~itG~~i~vdgG~~~~  260 (286)
T PRK07791        224 DAMAPENVSPLVVWLGSAESRDVTGKVFEVEGGKISV  260 (286)
T ss_pred             CCCCHHHHHHHHHHHhCchhcCCCCcEEEEcCCceEE
Confidence            3568999999999998653  3567888888765443

>PRK08177 short chain dehydrogenase; Provisional

Probab=99.74  E-value=2e-16  Score=130.34  Aligned_cols=153  Identities=16%  Similarity=0.199  Sum_probs=115.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhc-----CCCEEEEccc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD-----GVTAVISCVG  130 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~-----~~d~vi~~a~  130 (286)
                      |++|+||||+|++|++++++|+++|++|++++|++.+........++.++.+|+.|.++++++++     ++|+|||++|
T Consensus         1 ~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi~~ag   80 (225)
T PRK08177          1 KRTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQALPGVHIEKLDMNDPASLDQLLQRLQGQRFDLLFVNAG   80 (225)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHHhccccceEEcCCCCHHHHHHHHHHhhcCCCCEEEEcCc
Confidence            46899999999999999999999999999999987653211112467889999999988877765     4899999998


Q ss_pred             cCCC------------cchhhhhhhHHHHHHHHHHHHc---CCCEEEEEecCCcCCC----CccccchHHHHHHHHHHHH
Q 023205          131 GFGS------------NSYMYKINGTANINAIRAASEK---GVKRFVYISAADFGVA----NYLLQGYYEGKRAAETELL  191 (286)
Q Consensus       131 ~~~~------------~~~~~~~~~~~~~~l~~~a~~~---~v~~~v~~Ss~~~~~~----~~~~~~y~~sK~~~E~~~~  191 (286)
                      ....            ....+++|+.++..+++++...   +..+++++||. ++..    ......|+.+|...|.+++
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~ss~-~g~~~~~~~~~~~~Y~~sK~a~~~~~~  159 (225)
T PRK08177         81 ISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPGQGVLAFMSSQ-LGSVELPDGGEMPLYKASKAALNSMTR  159 (225)
T ss_pred             ccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhcCCEEEEEccC-ccccccCCCCCccchHHHHHHHHHHHH
Confidence            6421            1234577888888888877542   23578888884 2221    1234569999999999776


Q ss_pred             H------hCCCcEEEEeeCeeecC
Q 023205          192 T------RYPYGGVILRPGFIYGT  209 (286)
Q Consensus       192 ~------~~g~~~~ilRp~~v~g~  209 (286)
                      .      ..+++++.++||++-.+
T Consensus       160 ~l~~e~~~~~i~v~~i~PG~i~t~  183 (225)
T PRK08177        160 SFVAELGEPTLTVLSMHPGWVKTD  183 (225)
T ss_pred             HHHHHhhcCCeEEEEEcCCceecC
Confidence            3      46799999999998654

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.74  E-value=9.6e-17  Score=152.31  Aligned_cols=185  Identities=14%  Similarity=0.096  Sum_probs=135.7

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc-----cccCCceeEEeccCCCHhHHHHHhc-------CC
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------GV  122 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~-----~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~  122 (286)
                      .+++++||||+|+||.+++++|+++|++|++++|+.+....     .....++.++.+|++|.++++++++       .+
T Consensus       370 ~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i  449 (657)
T PRK07201        370 VGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEHGHV  449 (657)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence            45789999999999999999999999999999998654211     1113468899999999998887775       58


Q ss_pred             CEEEEccccCC------------CcchhhhhhhHHHHHHHHHH----HHcCCCEEEEEecCCcCCCCccccchHHHHHHH
Q 023205          123 TAVISCVGGFG------------SNSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKRAA  186 (286)
Q Consensus       123 d~vi~~a~~~~------------~~~~~~~~~~~~~~~l~~~a----~~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~  186 (286)
                      |++|||||...            .....+++|+.++.++++++    ++.+..+||++||............|+.+|...
T Consensus       450 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~  529 (657)
T PRK07201        450 DYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGVQTNAPRFSAYVASKAAL  529 (657)
T ss_pred             CEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCCCcchHHHHHHHH
Confidence            99999998531            11245678999988776665    445667999999953222233456799999999


Q ss_pred             HHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHH
Q 023205          187 ETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAV  260 (286)
Q Consensus       187 E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~  260 (286)
                      +.+...      ..|+++++++||.+..+...+..                      ..     .....++.+++|+.++
T Consensus       530 ~~~~~~la~e~~~~~i~v~~v~pg~v~T~~~~~~~----------------------~~-----~~~~~~~~~~~a~~i~  582 (657)
T PRK07201        530 DAFSDVAASETLSDGITFTTIHMPLVRTPMIAPTK----------------------RY-----NNVPTISPEEAADMVV  582 (657)
T ss_pred             HHHHHHHHHHHHhhCCcEEEEECCcCcccccCccc----------------------cc-----cCCCCCCHHHHHHHHH
Confidence            987653      46899999999999765322110                      00     0112478899999999


Q ss_pred             HHhcCC
Q 023205          261 RAATDP  266 (286)
Q Consensus       261 ~~l~~~  266 (286)
                      ..+.+.
T Consensus       583 ~~~~~~  588 (657)
T PRK07201        583 RAIVEK  588 (657)
T ss_pred             HHHHhC
Confidence            887643

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.74  E-value=4.4e-16  Score=130.86  Aligned_cols=203  Identities=15%  Similarity=0.075  Sum_probs=137.6

Q ss_pred             CCCeEEEEcCCC--hhHHHHHHHHHHCCCeEEEEecCCC---------cc-c---c---cccCCceeEEeccCCCHhHHH
Q 023205           55 PSEKLLVLGGNG--FVGSHICREALDRGLTVASLSRSGR---------SS-L---R---DSWANNVIWHQGNLLSSDSWK  116 (286)
Q Consensus        55 ~~~~VlVtGatG--~iG~~l~~~Ll~~g~~V~~l~R~~~---------~~-~---~---~~~~~~~~~i~~Dl~d~~~~~  116 (286)
                      ..++|+||||+|  .||.+++++|+++|++|+++.|...         .. .   .   .....++.++.+|++|.+++.
T Consensus         5 ~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~i~   84 (256)
T PRK12859          5 KNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQNDAPK   84 (256)
T ss_pred             CCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHH
Confidence            467999999995  8999999999999999998754311         00 0   0   011236788999999999888


Q ss_pred             HHhc-------CCCEEEEccccCCC----------cchhhhhhhHHHHHHHHHH----HHcCCCEEEEEecCCcCCCCcc
Q 023205          117 EALD-------GVTAVISCVGGFGS----------NSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYL  175 (286)
Q Consensus       117 ~~~~-------~~d~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a----~~~~v~~~v~~Ss~~~~~~~~~  175 (286)
                      +++.       .+|++||++|....          ....+++|+.+...+.+.+    ++.+-.+||++||.........
T Consensus        85 ~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  164 (256)
T PRK12859         85 ELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSGQFQGPMVG  164 (256)
T ss_pred             HHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEEcccccCCCCCC
Confidence            7764       37999999986421          1235678988887775444    3333458999999643333345


Q ss_pred             ccchHHHHHHHHHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCC
Q 023205          176 LQGYYEGKRAAETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPP  249 (286)
Q Consensus       176 ~~~y~~sK~~~E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  249 (286)
                      ...|+.+|...+.+.+.      ..|++++.++||.+-.+...           .   .......  ...|.     ..+
T Consensus       165 ~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~~~-----------~---~~~~~~~--~~~~~-----~~~  223 (256)
T PRK12859        165 ELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGWMT-----------E---EIKQGLL--PMFPF-----GRI  223 (256)
T ss_pred             chHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCCCC-----------H---HHHHHHH--hcCCC-----CCC
Confidence            67899999999987653      46899999999988654211           0   0111111  11111     124


Q ss_pred             ccHHHHHHHHHHHhcCCC--CCCCeeEeccc
Q 023205          250 VNVTVVAKVAVRAATDPV--FPPGIVDVHGI  278 (286)
Q Consensus       250 i~v~Dva~~~~~~l~~~~--~~~~~~~l~~~  278 (286)
                      ...+|+|+++..++....  ..|+++.+.|.
T Consensus       224 ~~~~d~a~~~~~l~s~~~~~~~G~~i~~dgg  254 (256)
T PRK12859        224 GEPKDAARLIKFLASEEAEWITGQIIHSEGG  254 (256)
T ss_pred             cCHHHHHHHHHHHhCccccCccCcEEEeCCC
Confidence            678999999999886532  35777777765

>PRK06197 short chain dehydrogenase; Provisional

Probab=99.74  E-value=8.2e-17  Score=138.84  Aligned_cols=157  Identities=15%  Similarity=0.081  Sum_probs=113.6

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc---c----ccCCceeEEeccCCCHhHHHHHhc------
Q 023205           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR---D----SWANNVIWHQGNLLSSDSWKEALD------  120 (286)
Q Consensus        54 ~~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~---~----~~~~~~~~i~~Dl~d~~~~~~~~~------  120 (286)
                      ...++|+||||+|+||++++++|+++|++|+++.|+.++...   .    ....++.++.+|+.|.++++++++      
T Consensus        14 ~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~   93 (306)
T PRK06197         14 QSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAAY   93 (306)
T ss_pred             CCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhhC
Confidence            346799999999999999999999999999999998644211   1    112468899999999998877664      


Q ss_pred             -CCCEEEEccccCCC--------cchhhhhhhHHHH----HHHHHHHHcCCCEEEEEecCC---cCC----------CCc
Q 023205          121 -GVTAVISCVGGFGS--------NSYMYKINGTANI----NAIRAASEKGVKRFVYISAAD---FGV----------ANY  174 (286)
Q Consensus       121 -~~d~vi~~a~~~~~--------~~~~~~~~~~~~~----~l~~~a~~~~v~~~v~~Ss~~---~~~----------~~~  174 (286)
                       .+|+||||||....        ....+++|+.++.    .+++.+++.+.++||++||..   ++.          ...
T Consensus        94 ~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~~~~~  173 (306)
T PRK06197         94 PRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGSRVVTVSSGGHRIRAAIHFDDLQWERRYN  173 (306)
T ss_pred             CCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEECCHHHhccCCCCccccCcccCCC
Confidence             48999999986421        2345788998854    455555555667999999952   121          112


Q ss_pred             cccchHHHHHHHHHHHHH------hCCCcEEEE--eeCeeecCC
Q 023205          175 LLQGYYEGKRAAETELLT------RYPYGGVIL--RPGFIYGTR  210 (286)
Q Consensus       175 ~~~~y~~sK~~~E~~~~~------~~g~~~~il--Rp~~v~g~~  210 (286)
                      +...|+.+|...+.+...      ..|++++++  .||.+..+.
T Consensus       174 ~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~~  217 (306)
T PRK06197        174 RVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTEL  217 (306)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCcc
Confidence            346799999999886653      356666554  699886543

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.73  E-value=6.4e-16  Score=130.06  Aligned_cols=208  Identities=13%  Similarity=0.033  Sum_probs=140.8

Q ss_pred             CCeEEEEcCC--ChhHHHHHHHHHHCCCeEEEEecCCCcc--cccc--cCCceeEEeccCCCHhHHHHHhc-------CC
Q 023205           56 SEKLLVLGGN--GFVGSHICREALDRGLTVASLSRSGRSS--LRDS--WANNVIWHQGNLLSSDSWKEALD-------GV  122 (286)
Q Consensus        56 ~~~VlVtGat--G~iG~~l~~~Ll~~g~~V~~l~R~~~~~--~~~~--~~~~~~~i~~Dl~d~~~~~~~~~-------~~  122 (286)
                      .++++||||+  +.||.+++++|+++|++|++..|+.+..  ..+.  ......++.+|++|.++++++++       .+
T Consensus        10 ~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~l   89 (258)
T PRK07533         10 GKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEEWGRL   89 (258)
T ss_pred             CCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHHcCCC
Confidence            5789999998  5999999999999999999999875321  1110  11235678999999988877653       47


Q ss_pred             CEEEEccccCCC--------------cchhhhhhhHHHHHHHHHHHHcC--CCEEEEEecCCcCCCCccccchHHHHHHH
Q 023205          123 TAVISCVGGFGS--------------NSYMYKINGTANINAIRAASEKG--VKRFVYISAADFGVANYLLQGYYEGKRAA  186 (286)
Q Consensus       123 d~vi~~a~~~~~--------------~~~~~~~~~~~~~~l~~~a~~~~--v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~  186 (286)
                      |++|||||....              ....+++|+.+...+.+.+...-  -.++|++||............|+.+|...
T Consensus        90 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss~~~~~~~~~~~~Y~asKaal  169 (258)
T PRK07533         90 DFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYYGAEKVVENYNLMGPVKAAL  169 (258)
T ss_pred             CEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEeccccccCCccchhhHHHHHHH
Confidence            999999985321              13456899999988888765421  24799999853222223345799999999


Q ss_pred             HHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHH
Q 023205          187 ETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAV  260 (286)
Q Consensus       187 E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~  260 (286)
                      +.+.+.      ..|++++.|.||.+-.+.....        ....+......   ...|.     ..+...+|+|++++
T Consensus       170 ~~l~~~la~el~~~gI~Vn~v~PG~v~T~~~~~~--------~~~~~~~~~~~---~~~p~-----~r~~~p~dva~~~~  233 (258)
T PRK07533        170 ESSVRYLAAELGPKGIRVHAISPGPLKTRAASGI--------DDFDALLEDAA---ERAPL-----RRLVDIDDVGAVAA  233 (258)
T ss_pred             HHHHHHHHHHhhhcCcEEEEEecCCcCChhhhcc--------CCcHHHHHHHH---hcCCc-----CCCCCHHHHHHHHH
Confidence            886653      4689999999998865432110        00011111111   11222     23578899999999


Q ss_pred             HHhcCC--CCCCCeeEecccc
Q 023205          261 RAATDP--VFPPGIVDVHGIL  279 (286)
Q Consensus       261 ~~l~~~--~~~~~~~~l~~~~  279 (286)
                      .++..+  ...|+.+.+.|..
T Consensus       234 ~L~s~~~~~itG~~i~vdgg~  254 (258)
T PRK07533        234 FLASDAARRLTGNTLYIDGGY  254 (258)
T ss_pred             HHhChhhccccCcEEeeCCcc
Confidence            998753  3567888887753

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.73  E-value=4.4e-16  Score=132.05  Aligned_cols=209  Identities=14%  Similarity=0.050  Sum_probs=140.8

Q ss_pred             CCeEEEEcCC--ChhHHHHHHHHHHCCCeEEEEecCCCc--ccc---cccCCceeEEeccCCCHhHHHHHhc-------C
Q 023205           56 SEKLLVLGGN--GFVGSHICREALDRGLTVASLSRSGRS--SLR---DSWANNVIWHQGNLLSSDSWKEALD-------G  121 (286)
Q Consensus        56 ~~~VlVtGat--G~iG~~l~~~Ll~~g~~V~~l~R~~~~--~~~---~~~~~~~~~i~~Dl~d~~~~~~~~~-------~  121 (286)
                      .|+++||||+  +.||..+++.|+++|++|++..|+...  ...   ...... .++.+|++|.++++++++       .
T Consensus         5 ~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~~~-~~~~~Dv~d~~~v~~~~~~i~~~~g~   83 (274)
T PRK08415          5 GKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELGSD-YVYELDVSKPEHFKSLAESLKKDLGK   83 (274)
T ss_pred             CcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCc-eEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            5789999997  799999999999999999999887421  111   111123 578999999988877664       4


Q ss_pred             CCEEEEccccCCC--------------cchhhhhhhHHHHHHHHHHHHcC--CCEEEEEecCCcCCCCccccchHHHHHH
Q 023205          122 VTAVISCVGGFGS--------------NSYMYKINGTANINAIRAASEKG--VKRFVYISAADFGVANYLLQGYYEGKRA  185 (286)
Q Consensus       122 ~d~vi~~a~~~~~--------------~~~~~~~~~~~~~~l~~~a~~~~--v~~~v~~Ss~~~~~~~~~~~~y~~sK~~  185 (286)
                      +|++|||||....              ....+++|+.+...+.+++...-  -.+||++||............|+.+|..
T Consensus        84 iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa  163 (274)
T PRK08415         84 IDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLGGVKYVPHYNVMGVAKAA  163 (274)
T ss_pred             CCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCCCccCCCcchhhhhHHHH
Confidence            7999999986321              12457899999988887765421  2489999985322222334679999999


Q ss_pred             HHHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHH
Q 023205          186 AETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVA  259 (286)
Q Consensus       186 ~E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~  259 (286)
                      .+.+.+.      ..|++++.+.||.+..+.....        ... ........  ...|.     ..+...+|+|+++
T Consensus       164 l~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~--------~~~-~~~~~~~~--~~~pl-----~r~~~pedva~~v  227 (274)
T PRK08415        164 LESSVRYLAVDLGKKGIRVNAISAGPIKTLAASGI--------GDF-RMILKWNE--INAPL-----KKNVSIEEVGNSG  227 (274)
T ss_pred             HHHHHHHHHHHhhhcCeEEEEEecCccccHHHhcc--------chh-hHHhhhhh--hhCch-----hccCCHHHHHHHH
Confidence            9886653      4689999999999865421100        000 00000000  11221     2357889999999


Q ss_pred             HHHhcCC--CCCCCeeEecccccc
Q 023205          260 VRAATDP--VFPPGIVDVHGILRY  281 (286)
Q Consensus       260 ~~~l~~~--~~~~~~~~l~~~~~~  281 (286)
                      +.++...  ...|+.+.+.|+..+
T Consensus       228 ~fL~s~~~~~itG~~i~vdGG~~~  251 (274)
T PRK08415        228 MYLLSDLSSGVTGEIHYVDAGYNI  251 (274)
T ss_pred             HHHhhhhhhcccccEEEEcCcccc
Confidence            9998743  346788888776543

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.72  E-value=8.9e-16  Score=129.10  Aligned_cols=208  Identities=13%  Similarity=0.056  Sum_probs=139.6

Q ss_pred             CCeEEEEcCC--ChhHHHHHHHHHHCCCeEEEEecCCCcc--cc----cccCCceeEEeccCCCHhHHHHHhc-------
Q 023205           56 SEKLLVLGGN--GFVGSHICREALDRGLTVASLSRSGRSS--LR----DSWANNVIWHQGNLLSSDSWKEALD-------  120 (286)
Q Consensus        56 ~~~VlVtGat--G~iG~~l~~~Ll~~g~~V~~l~R~~~~~--~~----~~~~~~~~~i~~Dl~d~~~~~~~~~-------  120 (286)
                      .++++||||+  +.||.+++++|+++|++|++..|+....  ..    +....++.++++|++|+++++++++       
T Consensus         7 ~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   86 (257)
T PRK08594          7 GKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKEEVG   86 (257)
T ss_pred             CCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHhCC
Confidence            5789999997  8999999999999999999988763221  11    1112467889999999988877664       


Q ss_pred             CCCEEEEccccCCC-----c---------chhhhhhhHHHHHHHHHHHHcC--CCEEEEEecCCcCCCCccccchHHHHH
Q 023205          121 GVTAVISCVGGFGS-----N---------SYMYKINGTANINAIRAASEKG--VKRFVYISAADFGVANYLLQGYYEGKR  184 (286)
Q Consensus       121 ~~d~vi~~a~~~~~-----~---------~~~~~~~~~~~~~l~~~a~~~~--v~~~v~~Ss~~~~~~~~~~~~y~~sK~  184 (286)
                      .+|++|||||....     +         ...+++|+.+...+++++...-  -.+||++||............|+.+|.
T Consensus        87 ~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKa  166 (257)
T PRK08594         87 VIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLGGERVVQNYNVMGVAKA  166 (257)
T ss_pred             CccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccCCccCCCCCchhHHHHH
Confidence            47999999985421     0         1245677888777777665421  248999999532222233467999999


Q ss_pred             HHHHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHH
Q 023205          185 AAETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKV  258 (286)
Q Consensus       185 ~~E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~  258 (286)
                      ..+.+.+.      ..|++++.|.||.+..+.....        ....+.... ..  ...|.     ..+...+|+|++
T Consensus       167 al~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~--------~~~~~~~~~-~~--~~~p~-----~r~~~p~~va~~  230 (257)
T PRK08594        167 SLEASVKYLANDLGKDGIRVNAISAGPIRTLSAKGV--------GGFNSILKE-IE--ERAPL-----RRTTTQEEVGDT  230 (257)
T ss_pred             HHHHHHHHHHHHhhhcCCEEeeeecCcccCHhHhhh--------ccccHHHHH-Hh--hcCCc-----cccCCHHHHHHH
Confidence            99987753      4689999999999865421100        000010000 00  11121     235788999999


Q ss_pred             HHHHhcCCC--CCCCeeEecccc
Q 023205          259 AVRAATDPV--FPPGIVDVHGIL  279 (286)
Q Consensus       259 ~~~~l~~~~--~~~~~~~l~~~~  279 (286)
                      ++.++....  ..|+.+.+.|+.
T Consensus       231 ~~~l~s~~~~~~tG~~~~~dgg~  253 (257)
T PRK08594        231 AAFLFSDLSRGVTGENIHVDSGY  253 (257)
T ss_pred             HHHHcCcccccccceEEEECCch
Confidence            999887533  457788887764

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=99.72  E-value=1.2e-15  Score=126.41  Aligned_cols=193  Identities=19%  Similarity=0.177  Sum_probs=133.2

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCC--CeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHh---cCCCEEEEcccc
Q 023205           57 EKLLVLGGNGFVGSHICREALDRG--LTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEAL---DGVTAVISCVGG  131 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g--~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~---~~~d~vi~~a~~  131 (286)
                      |+|+||||+|+||++++++|++++  ..|....|+....   ....++.++++|++|.++++++.   .++|+||||+|.
T Consensus         1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~---~~~~~~~~~~~Dls~~~~~~~~~~~~~~id~li~~aG~   77 (235)
T PRK09009          1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD---FQHDNVQWHALDVTDEAEIKQLSEQFTQLDWLINCVGM   77 (235)
T ss_pred             CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc---cccCceEEEEecCCCHHHHHHHHHhcCCCCEEEECCcc
Confidence            489999999999999999999985  5666666654332   22357889999999998876654   478999999997


Q ss_pred             CCC----------------cchhhhhhhHHHHHHHHHHHH----cCCCEEEEEecCCc--C-CCCccccchHHHHHHHHH
Q 023205          132 FGS----------------NSYMYKINGTANINAIRAASE----KGVKRFVYISAADF--G-VANYLLQGYYEGKRAAET  188 (286)
Q Consensus       132 ~~~----------------~~~~~~~~~~~~~~l~~~a~~----~~v~~~v~~Ss~~~--~-~~~~~~~~y~~sK~~~E~  188 (286)
                      ...                ....+.+|+.+...+.+.+..    .+..+++++||...  . ....+...|+.+|...+.
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~~~~~~~~~~~~~~Y~asK~a~~~  157 (235)
T PRK09009         78 LHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAKVGSISDNRLGGWYSYRASKAALNM  157 (235)
T ss_pred             ccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeecccccccCCCCCcchhhhhHHHHHH
Confidence            531                013457788888777666643    33458999987321  1 112234579999999998


Q ss_pred             HHHH------h--CCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHH
Q 023205          189 ELLT------R--YPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAV  260 (286)
Q Consensus       189 ~~~~------~--~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~  260 (286)
                      ++..      .  .+++++.+.||.+..+.....               .      ...|     ...+++.+|+|++++
T Consensus       158 ~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~~~---------------~------~~~~-----~~~~~~~~~~a~~~~  211 (235)
T PRK09009        158 FLKTLSIEWQRSLKHGVVLALHPGTTDTALSKPF---------------Q------QNVP-----KGKLFTPEYVAQCLL  211 (235)
T ss_pred             HHHHHHHHhhcccCCeEEEEEcccceecCCCcch---------------h------hccc-----cCCCCCHHHHHHHHH
Confidence            7753      1  478999999999876532100               0      0111     123578999999999


Q ss_pred             HHhcCCC--CCCCeeEeccc
Q 023205          261 RAATDPV--FPPGIVDVHGI  278 (286)
Q Consensus       261 ~~l~~~~--~~~~~~~l~~~  278 (286)
                      .++....  ..|..+.+.|.
T Consensus       212 ~l~~~~~~~~~g~~~~~~g~  231 (235)
T PRK09009        212 GIIANATPAQSGSFLAYDGE  231 (235)
T ss_pred             HHHHcCChhhCCcEEeeCCc
Confidence            9998753  34566655543

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.72  E-value=4.4e-16  Score=131.93  Aligned_cols=209  Identities=12%  Similarity=0.028  Sum_probs=139.6

Q ss_pred             CCeEEEEcCCC--hhHHHHHHHHHHCCCeEEEEecCCCcc--cccc--cCCceeEEeccCCCHhHHHHHhc-------CC
Q 023205           56 SEKLLVLGGNG--FVGSHICREALDRGLTVASLSRSGRSS--LRDS--WANNVIWHQGNLLSSDSWKEALD-------GV  122 (286)
Q Consensus        56 ~~~VlVtGatG--~iG~~l~~~Ll~~g~~V~~l~R~~~~~--~~~~--~~~~~~~i~~Dl~d~~~~~~~~~-------~~  122 (286)
                      .++++||||++  .||+.++++|+++|++|++..|+....  ..+.  ......++++|++|.++++++++       .+
T Consensus         7 ~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   86 (271)
T PRK06505          7 GKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKKWGKL   86 (271)
T ss_pred             CCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHhCCC
Confidence            57899999997  999999999999999999998864211  1111  01123578999999988877664       47


Q ss_pred             CEEEEccccCCC--------------cchhhhhhhHHHHHHHHHHHHcC--CCEEEEEecCCcCCCCccccchHHHHHHH
Q 023205          123 TAVISCVGGFGS--------------NSYMYKINGTANINAIRAASEKG--VKRFVYISAADFGVANYLLQGYYEGKRAA  186 (286)
Q Consensus       123 d~vi~~a~~~~~--------------~~~~~~~~~~~~~~l~~~a~~~~--v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~  186 (286)
                      |++|||||....              +...+++|+.++.++++++...-  -.+||++||.......+....|+.+|...
T Consensus        87 D~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~~G~Iv~isS~~~~~~~~~~~~Y~asKaAl  166 (271)
T PRK06505         87 DFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPDGGSMLTLTYGGSTRVMPNYNVMGVAKAAL  166 (271)
T ss_pred             CEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhccCceEEEEcCCCccccCCccchhhhhHHHH
Confidence            999999986421              12456788888888877765321  14899999853222223346799999999


Q ss_pred             HHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHH
Q 023205          187 ETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAV  260 (286)
Q Consensus       187 E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~  260 (286)
                      +.+.+.      ..|++++.|.||.+..+.....        ... ........  ...|.     ..+...+|+|++++
T Consensus       167 ~~l~r~la~el~~~gIrVn~v~PG~i~T~~~~~~--------~~~-~~~~~~~~--~~~p~-----~r~~~peeva~~~~  230 (271)
T PRK06505        167 EASVRYLAADYGPQGIRVNAISAGPVRTLAGAGI--------GDA-RAIFSYQQ--RNSPL-----RRTVTIDEVGGSAL  230 (271)
T ss_pred             HHHHHHHHHHHhhcCeEEEEEecCCccccccccC--------cch-HHHHHHHh--hcCCc-----cccCCHHHHHHHHH
Confidence            887653      4689999999999965432100        000 00111111  11222     13467899999999


Q ss_pred             HHhcCCC--CCCCeeEeccccc
Q 023205          261 RAATDPV--FPPGIVDVHGILR  280 (286)
Q Consensus       261 ~~l~~~~--~~~~~~~l~~~~~  280 (286)
                      .++....  ..++.+.+.|...
T Consensus       231 fL~s~~~~~itG~~i~vdgG~~  252 (271)
T PRK06505        231 YLLSDLSSGVTGEIHFVDSGYN  252 (271)
T ss_pred             HHhCccccccCceEEeecCCcc
Confidence            9987532  4577888877643

>PRK05855 short chain dehydrogenase; Validated

Probab=99.72  E-value=2.6e-16  Score=147.13  Aligned_cols=203  Identities=15%  Similarity=0.039  Sum_probs=136.9

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc-----cccCCceeEEeccCCCHhHHHHHhc-------CC
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------GV  122 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~-----~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~  122 (286)
                      ..++++||||+|+||++++++|.++|++|++++|+.++...     .....++.++.+|++|++++.++++       .+
T Consensus       314 ~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i  393 (582)
T PRK05855        314 SGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHGVP  393 (582)
T ss_pred             CCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence            35689999999999999999999999999999998644211     1112468899999999998887765       37


Q ss_pred             CEEEEccccCCC----------cchhhhhhhHHHHHHHHHHHH----cC-CCEEEEEecCCcCCCCccccchHHHHHHHH
Q 023205          123 TAVISCVGGFGS----------NSYMYKINGTANINAIRAASE----KG-VKRFVYISAADFGVANYLLQGYYEGKRAAE  187 (286)
Q Consensus       123 d~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~~----~~-v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E  187 (286)
                      |++|||||....          ....+++|+.++.++.+++..    .+ -.+||++||............|+.+|...+
T Consensus       394 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sKaa~~  473 (582)
T PRK05855        394 DIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPSRSLPAYATSKAAVL  473 (582)
T ss_pred             cEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCCCCCcHHHHHHHHHH
Confidence            999999987531          124567999999988887543    33 248999999532233345678999999988


Q ss_pred             HHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHH
Q 023205          188 TELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVR  261 (286)
Q Consensus       188 ~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~  261 (286)
                      .+...      ..|+++++++||.+-.+....... +. ......+......   ...+     .......+|+|+++++
T Consensus       474 ~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~-~~-~~~~~~~~~~~~~---~~~~-----~~~~~~p~~va~~~~~  543 (582)
T PRK05855        474 MLSECLRAELAAAGIGVTAICPGFVDTNIVATTRF-AG-ADAEDEARRRGRA---DKLY-----QRRGYGPEKVAKAIVD  543 (582)
T ss_pred             HHHHHHHHHhcccCcEEEEEEeCCCcccchhcccc-CC-cccchhhhHHhhh---hhhc-----cccCCCHHHHHHHHHH
Confidence            86542      468999999999886543221100 00 0000000000000   0000     0112578999999999


Q ss_pred             HhcCCC
Q 023205          262 AATDPV  267 (286)
Q Consensus       262 ~l~~~~  267 (286)
                      ++..+.
T Consensus       544 ~~~~~~  549 (582)
T PRK05855        544 AVKRNK  549 (582)
T ss_pred             HHHcCC
Confidence            998754

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.71  E-value=3.6e-15  Score=125.66  Aligned_cols=208  Identities=13%  Similarity=0.082  Sum_probs=138.0

Q ss_pred             CCeEEEEcCCC--hhHHHHHHHHHHCCCeEEEEecCCC--cccccc--cCCceeEEeccCCCHhHHHHHhc-------CC
Q 023205           56 SEKLLVLGGNG--FVGSHICREALDRGLTVASLSRSGR--SSLRDS--WANNVIWHQGNLLSSDSWKEALD-------GV  122 (286)
Q Consensus        56 ~~~VlVtGatG--~iG~~l~~~Ll~~g~~V~~l~R~~~--~~~~~~--~~~~~~~i~~Dl~d~~~~~~~~~-------~~  122 (286)
                      .++++||||++  .||+++++.|+++|++|++..|+..  +...+.  ....+.++.+|++|+++++++++       .+
T Consensus         6 ~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i   85 (262)
T PRK07984          6 GKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVWPKF   85 (262)
T ss_pred             CCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecchhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhcCCC
Confidence            57899999985  9999999999999999998888631  111111  12346788999999998887764       47


Q ss_pred             CEEEEccccCCC---------------cchhhhhhhHHHHHHHHHHHHc--CCCEEEEEecCCcCCCCccccchHHHHHH
Q 023205          123 TAVISCVGGFGS---------------NSYMYKINGTANINAIRAASEK--GVKRFVYISAADFGVANYLLQGYYEGKRA  185 (286)
Q Consensus       123 d~vi~~a~~~~~---------------~~~~~~~~~~~~~~l~~~a~~~--~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~  185 (286)
                      |++|||||....               ....+++|+.+...+.+++...  .-.+||++||............|+.+|..
T Consensus        86 D~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~iss~~~~~~~~~~~~Y~asKaa  165 (262)
T PRK07984         86 DGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNVMGLAKAS  165 (262)
T ss_pred             CEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcCCcEEEEEecCCCCCCCCCcchhHHHHHH
Confidence            999999985321               0134577888877777765432  12479999985432223345679999999


Q ss_pred             HHHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHH
Q 023205          186 AETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVA  259 (286)
Q Consensus       186 ~E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~  259 (286)
                      .+.+.+.      ..|+++++|.||.+..+... ..       ....+.. ....  ...|.     ..+...+|+|+++
T Consensus       166 l~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~-~~-------~~~~~~~-~~~~--~~~p~-----~r~~~pedva~~~  229 (262)
T PRK07984        166 LEANVRYMANAMGPEGVRVNAISAGPIRTLAAS-GI-------KDFRKML-AHCE--AVTPI-----RRTVTIEDVGNSA  229 (262)
T ss_pred             HHHHHHHHHHHhcccCcEEeeeecCcccchHHh-cC-------CchHHHH-HHHH--HcCCC-----cCCCCHHHHHHHH
Confidence            9987753      46899999999988643211 00       0000111 1110  01121     2357889999999


Q ss_pred             HHHhcCC--CCCCCeeEecccc
Q 023205          260 VRAATDP--VFPPGIVDVHGIL  279 (286)
Q Consensus       260 ~~~l~~~--~~~~~~~~l~~~~  279 (286)
                      +.++..+  ...+..+.+.+..
T Consensus       230 ~~L~s~~~~~itG~~i~vdgg~  251 (262)
T PRK07984        230 AFLCSDLSAGISGEVVHVDGGF  251 (262)
T ss_pred             HHHcCcccccccCcEEEECCCc
Confidence            9998753  3457788877753

>PRK05854 short chain dehydrogenase; Provisional

Probab=99.70  E-value=4e-16  Score=134.91  Aligned_cols=155  Identities=15%  Similarity=0.102  Sum_probs=115.2

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc------cc-cCCceeEEeccCCCHhHHHHHhc-------
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DS-WANNVIWHQGNLLSSDSWKEALD-------  120 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~------~~-~~~~~~~i~~Dl~d~~~~~~~~~-------  120 (286)
                      .+++++||||+|+||.+++++|+++|++|+++.|+.++...      .. ...++.++.+|+.|.++++++++       
T Consensus        13 ~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~~~   92 (313)
T PRK05854         13 SGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAEGR   92 (313)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHhCC
Confidence            46799999999999999999999999999999998654211      11 12368899999999998887664       


Q ss_pred             CCCEEEEccccCCC---------cchhhhhhhHHHHHHHHHHHH---cCCCEEEEEecCCc--CCC----------Cccc
Q 023205          121 GVTAVISCVGGFGS---------NSYMYKINGTANINAIRAASE---KGVKRFVYISAADF--GVA----------NYLL  176 (286)
Q Consensus       121 ~~d~vi~~a~~~~~---------~~~~~~~~~~~~~~l~~~a~~---~~v~~~v~~Ss~~~--~~~----------~~~~  176 (286)
                      .+|++|||||....         ....+.+|+.+...+.+.+..   .+..+||++||...  +..          ..+.
T Consensus        93 ~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~~~riv~vsS~~~~~~~~~~~~~~~~~~~~~~  172 (313)
T PRK05854         93 PIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAGRARVTSQSSIAARRGAINWDDLNWERSYAGM  172 (313)
T ss_pred             CccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhCCCCeEEEechhhcCCCcCcccccccccCcch
Confidence            47999999986532         124578899998877766642   23458999999521  111          1234


Q ss_pred             cchHHHHHHHHHHHHH--------hCCCcEEEEeeCeeecC
Q 023205          177 QGYYEGKRAAETELLT--------RYPYGGVILRPGFIYGT  209 (286)
Q Consensus       177 ~~y~~sK~~~E~~~~~--------~~g~~~~ilRp~~v~g~  209 (286)
                      ..|+.+|...+.+..+        ..|+.++.+.||.+..+
T Consensus       173 ~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~  213 (313)
T PRK05854        173 RAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTN  213 (313)
T ss_pred             hhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccC
Confidence            5799999998886643        24799999999998654

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.70  E-value=1e-15  Score=135.22  Aligned_cols=177  Identities=18%  Similarity=0.098  Sum_probs=123.6

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCccccc--ccCCceeEEeccCCCHhHHHHHhcCCCEEEEccccC
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRD--SWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGF  132 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~--~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~~  132 (286)
                      ++++|+||||+|+||++++++|.++|++|++++|+.++....  ....++..+.+|++|++.+.+.+.++|++|||||..
T Consensus       177 ~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd~~~v~~~l~~IDiLInnAGi~  256 (406)
T PRK07424        177 KGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEINGEDLPVKTLHWQVGQEAALAELLEKVDILIINHGIN  256 (406)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCCHHHHHHHhCCCCEEEECCCcC
Confidence            467999999999999999999999999999999986542111  112246788999999999999999999999999864


Q ss_pred             C-------CcchhhhhhhHHHHHHHHHHHH----cCC---C-EEEEEecCCcCCCCccccchHHHHHHHHHHHH---HhC
Q 023205          133 G-------SNSYMYKINGTANINAIRAASE----KGV---K-RFVYISAADFGVANYLLQGYYEGKRAAETELL---TRY  194 (286)
Q Consensus       133 ~-------~~~~~~~~~~~~~~~l~~~a~~----~~v---~-~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~---~~~  194 (286)
                      .       .....+++|+.++.++++++..    .+.   + .+|.+|++.  ........|+.+|...+.+..   ...
T Consensus       257 ~~~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ssa~--~~~~~~~~Y~ASKaAl~~l~~l~~~~~  334 (406)
T PRK07424        257 VHGERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSEAE--VNPAFSPLYELSKRALGDLVTLRRLDA  334 (406)
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEcccc--ccCCCchHHHHHHHHHHHHHHHHHhCC
Confidence            2       1235678999999999888743    221   2 345555432  211123469999999988432   234


Q ss_pred             CCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcCCC
Q 023205          195 PYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDPV  267 (286)
Q Consensus       195 g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~~  267 (286)
                      ++.+..+.||.+    .+..                      .+        ...++.+|+|+.++.++++++
T Consensus       335 ~~~I~~i~~gp~----~t~~----------------------~~--------~~~~spe~vA~~il~~i~~~~  373 (406)
T PRK07424        335 PCVVRKLILGPF----KSNL----------------------NP--------IGVMSADWVAKQILKLAKRDF  373 (406)
T ss_pred             CCceEEEEeCCC----cCCC----------------------Cc--------CCCCCHHHHHHHHHHHHHCCC
Confidence            555555555432    1100                      00        123788999999999998765

>PRK05599 hypothetical protein; Provisional

Probab=99.70  E-value=2.8e-15  Score=125.26  Aligned_cols=190  Identities=19%  Similarity=0.178  Sum_probs=129.3

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc------cccCCceeEEeccCCCHhHHHHHhc-------CCC
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD-------GVT  123 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~------~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d  123 (286)
                      |+++||||++.||..++++|. +|++|+++.|+.++...      +.....+.++.+|+.|+++++++++       .+|
T Consensus         1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id   79 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEIS   79 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCCC
Confidence            579999999999999999998 59999999998654211      1112347889999999988776653       579


Q ss_pred             EEEEccccCCCc----------chhhhhhhHHHHHHHHHH----HHcC-CCEEEEEecCCcCCCCccccchHHHHHHHHH
Q 023205          124 AVISCVGGFGSN----------SYMYKINGTANINAIRAA----SEKG-VKRFVYISAADFGVANYLLQGYYEGKRAAET  188 (286)
Q Consensus       124 ~vi~~a~~~~~~----------~~~~~~~~~~~~~l~~~a----~~~~-v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~  188 (286)
                      ++|||+|.....          .....+|+.+...+++.+    .+.+ -.+||++||............|+.+|...+.
T Consensus        80 ~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~  159 (246)
T PRK05599         80 LAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWRARRANYVYGSTKAGLDA  159 (246)
T ss_pred             EEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccccCCcCCcchhhHHHHHHH
Confidence            999999875321          123456666666554443    3332 3589999995322223345679999999887


Q ss_pred             HHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHH
Q 023205          189 ELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRA  262 (286)
Q Consensus       189 ~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~  262 (286)
                      +...      ..|++++.+.||.+..+.....                      .+.+.       ....+|+|++++.+
T Consensus       160 ~~~~la~el~~~~I~v~~v~PG~v~T~~~~~~----------------------~~~~~-------~~~pe~~a~~~~~~  210 (246)
T PRK05599        160 FCQGLADSLHGSHVRLIIARPGFVIGSMTTGM----------------------KPAPM-------SVYPRDVAAAVVSA  210 (246)
T ss_pred             HHHHHHHHhcCCCceEEEecCCcccchhhcCC----------------------CCCCC-------CCCHHHHHHHHHHH
Confidence            6642      4689999999998865421100                      00000       25789999999999


Q ss_pred             hcCCCCCCCeeEecc
Q 023205          263 ATDPVFPPGIVDVHG  277 (286)
Q Consensus       263 l~~~~~~~~~~~l~~  277 (286)
                      +..+.. .+.+.+.+
T Consensus       211 ~~~~~~-~~~~~~~~  224 (246)
T PRK05599        211 ITSSKR-STTLWIPG  224 (246)
T ss_pred             HhcCCC-CceEEeCc
Confidence            987643 34455543

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=99.70  E-value=3.4e-15  Score=125.67  Aligned_cols=209  Identities=15%  Similarity=0.100  Sum_probs=140.9

Q ss_pred             CCeEEEEcCC--ChhHHHHHHHHHHCCCeEEEEecCCCcc-----cccc--cCCceeEEeccCCCHhHHHHHhc------
Q 023205           56 SEKLLVLGGN--GFVGSHICREALDRGLTVASLSRSGRSS-----LRDS--WANNVIWHQGNLLSSDSWKEALD------  120 (286)
Q Consensus        56 ~~~VlVtGat--G~iG~~l~~~Ll~~g~~V~~l~R~~~~~-----~~~~--~~~~~~~i~~Dl~d~~~~~~~~~------  120 (286)
                      .++++||||+  +.||.+++++|+++|++|++..|+.+..     ..+.  ....+.++.+|++|+++++++++      
T Consensus         6 ~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~   85 (258)
T PRK07370          6 GKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQKW   85 (258)
T ss_pred             CcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHHHc
Confidence            5789999986  7999999999999999998887654321     1111  11246788999999998887664      


Q ss_pred             -CCCEEEEccccCC------C--------cchhhhhhhHHHHHHHHHHHHc--CCCEEEEEecCCcCCCCccccchHHHH
Q 023205          121 -GVTAVISCVGGFG------S--------NSYMYKINGTANINAIRAASEK--GVKRFVYISAADFGVANYLLQGYYEGK  183 (286)
Q Consensus       121 -~~d~vi~~a~~~~------~--------~~~~~~~~~~~~~~l~~~a~~~--~v~~~v~~Ss~~~~~~~~~~~~y~~sK  183 (286)
                       .+|++|||||...      +        ....+++|+.++..+.+++...  .-.+||++||.......+....|+.+|
T Consensus        86 g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~~~~~Y~asK  165 (258)
T PRK07370         86 GKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYLGGVRAIPNYNVMGVAK  165 (258)
T ss_pred             CCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEeccccccCCcccchhhHHH
Confidence             4799999998542      1        1345688999988887776532  125899999953222333456799999


Q ss_pred             HHHHHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHH
Q 023205          184 RAAETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAK  257 (286)
Q Consensus       184 ~~~E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~  257 (286)
                      ...+.+.+.      ..|++++.+.||.+-.+.... .       ....+. .....  ...|.     ..+...+|+|+
T Consensus       166 aal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~~~~-~-------~~~~~~-~~~~~--~~~p~-----~r~~~~~dva~  229 (258)
T PRK07370        166 AALEASVRYLAAELGPKNIRVNAISAGPIRTLASSA-V-------GGILDM-IHHVE--EKAPL-----RRTVTQTEVGN  229 (258)
T ss_pred             HHHHHHHHHHHHHhCcCCeEEEEEecCcccCchhhc-c-------ccchhh-hhhhh--hcCCc-----CcCCCHHHHHH
Confidence            999987753      468999999999996542110 0       000011 11100  11121     24677899999


Q ss_pred             HHHHHhcCCC--CCCCeeEeccccc
Q 023205          258 VAVRAATDPV--FPPGIVDVHGILR  280 (286)
Q Consensus       258 ~~~~~l~~~~--~~~~~~~l~~~~~  280 (286)
                      ++..++..+.  ..|+++.+.|+..
T Consensus       230 ~~~fl~s~~~~~~tG~~i~vdgg~~  254 (258)
T PRK07370        230 TAAFLLSDLASGITGQTIYVDAGYC  254 (258)
T ss_pred             HHHHHhChhhccccCcEEEECCccc
Confidence            9999987533  4577888877644

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.70  E-value=2.2e-15  Score=127.71  Aligned_cols=209  Identities=12%  Similarity=0.047  Sum_probs=141.0

Q ss_pred             CCeEEEEcCC--ChhHHHHHHHHHHCCCeEEEEecCCC--cccccc--cCCceeEEeccCCCHhHHHHHhc-------CC
Q 023205           56 SEKLLVLGGN--GFVGSHICREALDRGLTVASLSRSGR--SSLRDS--WANNVIWHQGNLLSSDSWKEALD-------GV  122 (286)
Q Consensus        56 ~~~VlVtGat--G~iG~~l~~~Ll~~g~~V~~l~R~~~--~~~~~~--~~~~~~~i~~Dl~d~~~~~~~~~-------~~  122 (286)
                      .++++||||+  +.||.++++.|+++|++|++..|+..  +...+.  ......++++|++|+++++++++       .+
T Consensus        10 ~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i   89 (272)
T PRK08159         10 GKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKKWGKL   89 (272)
T ss_pred             CCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHhcCCC
Confidence            4789999997  89999999999999999998877632  111111  01235678999999998887664       47


Q ss_pred             CEEEEccccCCC--------------cchhhhhhhHHHHHHHHHHHHc--CCCEEEEEecCCcCCCCccccchHHHHHHH
Q 023205          123 TAVISCVGGFGS--------------NSYMYKINGTANINAIRAASEK--GVKRFVYISAADFGVANYLLQGYYEGKRAA  186 (286)
Q Consensus       123 d~vi~~a~~~~~--------------~~~~~~~~~~~~~~l~~~a~~~--~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~  186 (286)
                      |++|||||....              ....+++|+.++..+++.+...  +-.++|++||.......+....|+.+|...
T Consensus        90 D~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~~p~~~~Y~asKaal  169 (272)
T PRK08159         90 DFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYYGAEKVMPHYNVMGVAKAAL  169 (272)
T ss_pred             cEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEeccccccCCCcchhhhhHHHHH
Confidence            999999986421              1245689999999888877653  125899999853222233456799999999


Q ss_pred             HHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHH
Q 023205          187 ETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAV  260 (286)
Q Consensus       187 E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~  260 (286)
                      +.+.+.      ..|+++++|.||.+..+.....        ... ........  ...|.     ..+...+|+|++++
T Consensus       170 ~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~--------~~~-~~~~~~~~--~~~p~-----~r~~~peevA~~~~  233 (272)
T PRK08159        170 EASVKYLAVDLGPKNIRVNAISAGPIKTLAASGI--------GDF-RYILKWNE--YNAPL-----RRTVTIEEVGDSAL  233 (272)
T ss_pred             HHHHHHHHHHhcccCeEEEEeecCCcCCHHHhcC--------Ccc-hHHHHHHH--hCCcc-----cccCCHHHHHHHHH
Confidence            887753      4689999999999864321100        000 00111100  01222     13578899999999


Q ss_pred             HHhcCC--CCCCCeeEeccccc
Q 023205          261 RAATDP--VFPPGIVDVHGILR  280 (286)
Q Consensus       261 ~~l~~~--~~~~~~~~l~~~~~  280 (286)
                      .++...  ...|.++.+.|...
T Consensus       234 ~L~s~~~~~itG~~i~vdgG~~  255 (272)
T PRK08159        234 YLLSDLSRGVTGEVHHVDSGYH  255 (272)
T ss_pred             HHhCccccCccceEEEECCCce
Confidence            999753  34577888887643

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.69  E-value=1.3e-15  Score=138.35  Aligned_cols=207  Identities=16%  Similarity=0.102  Sum_probs=140.1

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCccc-cc-ccCCceeEEeccCCCHhHHHHHhc-------CCCEE
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSL-RD-SWANNVIWHQGNLLSSDSWKEALD-------GVTAV  125 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~-~~-~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d~v  125 (286)
                      ..++++||||+|+||..+++.|.++|++|++++|...... .+ ....+..++.+|++|.++++++++       ++|+|
T Consensus       209 ~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~v  288 (450)
T PRK08261        209 AGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRVGGTALALDITAPDAPARIAEHLAERHGGLDIV  288 (450)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhCCCCCEE
Confidence            4579999999999999999999999999999988543211 11 011245688999999988877664       57999


Q ss_pred             EEccccCCC----------cchhhhhhhHHHHHHHHHHHHcCC----CEEEEEecCCcCCCCccccchHHHHHHHHHHHH
Q 023205          126 ISCVGGFGS----------NSYMYKINGTANINAIRAASEKGV----KRFVYISAADFGVANYLLQGYYEGKRAAETELL  191 (286)
Q Consensus       126 i~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~~~~v----~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~  191 (286)
                      |||+|...+          ....+++|+.++.++.+++.....    .+||++||...-........|+.+|...+.++.
T Consensus       289 i~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~g~~~~~~Y~asKaal~~~~~  368 (450)
T PRK08261        289 VHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIAGNRGQTNYAASKAGVIGLVQ  368 (450)
T ss_pred             EECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCCCChHHHHHHHHHHHHHH
Confidence            999996532          134568999999999998876432    589999985322223345689999997777654


Q ss_pred             H------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcC
Q 023205          192 T------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATD  265 (286)
Q Consensus       192 ~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~  265 (286)
                      .      ..|+.++++.||.+-.+... .  .+     ..   ..........       .......+|+|+++..++..
T Consensus       369 ~la~el~~~gi~v~~v~PG~i~t~~~~-~--~~-----~~---~~~~~~~~~~-------l~~~~~p~dva~~~~~l~s~  430 (450)
T PRK08261        369 ALAPLLAERGITINAVAPGFIETQMTA-A--IP-----FA---TREAGRRMNS-------LQQGGLPVDVAETIAWLASP  430 (450)
T ss_pred             HHHHHHhhhCcEEEEEEeCcCcchhhh-c--cc-----hh---HHHHHhhcCC-------cCCCCCHHHHHHHHHHHhCh
Confidence            2      46899999999987432111 0  00     00   0000010111       11224568999999998864


Q ss_pred             CC--CCCCeeEecccc
Q 023205          266 PV--FPPGIVDVHGIL  279 (286)
Q Consensus       266 ~~--~~~~~~~l~~~~  279 (286)
                      ..  ..|+++.+.|..
T Consensus       431 ~~~~itG~~i~v~g~~  446 (450)
T PRK08261        431 ASGGVTGNVVRVCGQS  446 (450)
T ss_pred             hhcCCCCCEEEECCCc
Confidence            32  357888887754

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.69  E-value=2.7e-15  Score=126.42  Aligned_cols=209  Identities=15%  Similarity=0.092  Sum_probs=136.9

Q ss_pred             CCeEEEEcC--CChhHHHHHHHHHHCCCeEEEEecCCCcc--cccc--cCCceeEEeccCCCHhHHHHHhc-------CC
Q 023205           56 SEKLLVLGG--NGFVGSHICREALDRGLTVASLSRSGRSS--LRDS--WANNVIWHQGNLLSSDSWKEALD-------GV  122 (286)
Q Consensus        56 ~~~VlVtGa--tG~iG~~l~~~Ll~~g~~V~~l~R~~~~~--~~~~--~~~~~~~i~~Dl~d~~~~~~~~~-------~~  122 (286)
                      .++++||||  ++.||++++++|+++|++|++..|+....  ..+.  .......+++|++|+++++++++       .+
T Consensus         6 ~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   85 (261)
T PRK08690          6 GKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHWDGL   85 (261)
T ss_pred             CcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            578999997  67999999999999999999887653211  1111  11234578999999998887764       58


Q ss_pred             CEEEEccccCCC-----------c----chhhhhhhHHHHHHHHHHHH---cCCCEEEEEecCCcCCCCccccchHHHHH
Q 023205          123 TAVISCVGGFGS-----------N----SYMYKINGTANINAIRAASE---KGVKRFVYISAADFGVANYLLQGYYEGKR  184 (286)
Q Consensus       123 d~vi~~a~~~~~-----------~----~~~~~~~~~~~~~l~~~a~~---~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~  184 (286)
                      |++|||||....           .    ...+++|+.+...+.+.+..   .+-.+||++||...-...+....|+.+|.
T Consensus        86 D~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~~g~Iv~iss~~~~~~~~~~~~Y~asKa  165 (261)
T PRK08690         86 DGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGRNSAIVALSYLGAVRAIPNYNVMGMAKA  165 (261)
T ss_pred             cEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhcCcEEEEEcccccccCCCCcccchhHHH
Confidence            999999986421           0    12245677777666665432   12247999998532222334567999999


Q ss_pred             HHHHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHH
Q 023205          185 AAETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKV  258 (286)
Q Consensus       185 ~~E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~  258 (286)
                      ..+.+.+.      ..|++++.+.||.+-.+.....        ....+.. ....  ...|.     ..+...+|+|++
T Consensus       166 al~~l~~~la~e~~~~gIrVn~i~PG~v~T~~~~~~--------~~~~~~~-~~~~--~~~p~-----~r~~~peevA~~  229 (261)
T PRK08690        166 SLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASGI--------ADFGKLL-GHVA--AHNPL-----RRNVTIEEVGNT  229 (261)
T ss_pred             HHHHHHHHHHHHhhhcCeEEEEEecCcccchhhhcC--------CchHHHH-HHHh--hcCCC-----CCCCCHHHHHHH
Confidence            99886642      4689999999999965421110        0000111 1111  11222     236789999999


Q ss_pred             HHHHhcCC--CCCCCeeEeccccc
Q 023205          259 AVRAATDP--VFPPGIVDVHGILR  280 (286)
Q Consensus       259 ~~~~l~~~--~~~~~~~~l~~~~~  280 (286)
                      ++.++..+  ...|+++.+.|...
T Consensus       230 v~~l~s~~~~~~tG~~i~vdgG~~  253 (261)
T PRK08690        230 AAFLLSDLSSGITGEITYVDGGYS  253 (261)
T ss_pred             HHHHhCcccCCcceeEEEEcCCcc
Confidence            99999753  34677888877643

>PLN02780 ketoreductase/ oxidoreductase

Probab=99.69  E-value=2.4e-15  Score=130.29  Aligned_cols=181  Identities=14%  Similarity=0.085  Sum_probs=126.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc------ccc-CCceeEEeccCCC--HhHHH---HHhcC--
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSW-ANNVIWHQGNLLS--SDSWK---EALDG--  121 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~------~~~-~~~~~~i~~Dl~d--~~~~~---~~~~~--  121 (286)
                      ++.++||||+|+||++++++|+++|++|++++|++++...      ... ..++..+.+|+++  .+.++   +.+.+  
T Consensus        53 g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~~d  132 (320)
T PLN02780         53 GSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEGLD  132 (320)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcCCC
Confidence            4689999999999999999999999999999998754211      111 1357778899975  33333   33444  


Q ss_pred             CCEEEEccccCCC------------cchhhhhhhHHHHHHHHHHH----HcCCCEEEEEecCCc-CCC-CccccchHHHH
Q 023205          122 VTAVISCVGGFGS------------NSYMYKINGTANINAIRAAS----EKGVKRFVYISAADF-GVA-NYLLQGYYEGK  183 (286)
Q Consensus       122 ~d~vi~~a~~~~~------------~~~~~~~~~~~~~~l~~~a~----~~~v~~~v~~Ss~~~-~~~-~~~~~~y~~sK  183 (286)
                      +|++|||||....            ....+++|+.++..+.+++.    +.+..+||++||... ..+ .+....|+.+|
T Consensus       133 idilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~p~~~~Y~aSK  212 (320)
T PLN02780        133 VGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAIVIPSDPLYAVYAATK  212 (320)
T ss_pred             ccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCCCccchHHHHHH
Confidence            5699999986421            12356899999988877764    345568999999532 112 23457899999


Q ss_pred             HHHHHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHH
Q 023205          184 RAAETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAK  257 (286)
Q Consensus       184 ~~~E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~  257 (286)
                      ...+.+...      ..|++++++.||.+-.+.....                       .     .. ....+.+++|+
T Consensus       213 aal~~~~~~L~~El~~~gI~V~~v~PG~v~T~~~~~~-----------------------~-----~~-~~~~~p~~~A~  263 (320)
T PLN02780        213 AYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKMASIR-----------------------R-----SS-FLVPSSDGYAR  263 (320)
T ss_pred             HHHHHHHHHHHHHHhccCeEEEEEeeCceecCccccc-----------------------C-----CC-CCCCCHHHHHH
Confidence            999986643      4689999999999965432100                       0     00 11357899999


Q ss_pred             HHHHHhcC
Q 023205          258 VAVRAATD  265 (286)
Q Consensus       258 ~~~~~l~~  265 (286)
                      .+++.+..
T Consensus       264 ~~~~~~~~  271 (320)
T PLN02780        264 AALRWVGY  271 (320)
T ss_pred             HHHHHhCC
Confidence            99998854

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.69  E-value=8.6e-16  Score=127.70  Aligned_cols=153  Identities=19%  Similarity=0.165  Sum_probs=113.0

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc------cccCC-ceeEEeccCCCHhHHHHHh-------c
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWAN-NVIWHQGNLLSSDSWKEAL-------D  120 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~------~~~~~-~~~~i~~Dl~d~~~~~~~~-------~  120 (286)
                      ..|.|+||||+.+||.+++.+|.++|.+++.+.|...+...      +.... ++.++++|++|.+++.+++       .
T Consensus        11 ~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~fg   90 (282)
T KOG1205|consen   11 AGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRHFG   90 (282)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHhcC
Confidence            36799999999999999999999999988888887654211      22233 5999999999999888664       4


Q ss_pred             CCCEEEEccccCC----------CcchhhhhhhHHHHHHHHHHH----HcCCCEEEEEecCCcCCCCccc-cchHHHHHH
Q 023205          121 GVTAVISCVGGFG----------SNSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLL-QGYYEGKRA  185 (286)
Q Consensus       121 ~~d~vi~~a~~~~----------~~~~~~~~~~~~~~~l~~~a~----~~~v~~~v~~Ss~~~~~~~~~~-~~y~~sK~~  185 (286)
                      ++|++|||||...          +....+++|+.|+..+.+++-    +.+-.|||.+||.. |....|. ..|.+||++
T Consensus        91 ~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSia-G~~~~P~~~~Y~ASK~A  169 (282)
T KOG1205|consen   91 RVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIA-GKMPLPFRSIYSASKHA  169 (282)
T ss_pred             CCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccc-cccCCCcccccchHHHH
Confidence            7899999999753          113578999999988877764    44445899999963 4444443 489999999


Q ss_pred             HHHHHH----H--hCCCcEE-EEeeCeeec
Q 023205          186 AETELL----T--RYPYGGV-ILRPGFIYG  208 (286)
Q Consensus       186 ~E~~~~----~--~~g~~~~-ilRp~~v~g  208 (286)
                      .+.+..    +  ..+..+. ++.||.|--
T Consensus       170 l~~f~etLR~El~~~~~~i~i~V~PG~V~T  199 (282)
T KOG1205|consen  170 LEGFFETLRQELIPLGTIIIILVSPGPIET  199 (282)
T ss_pred             HHHHHHHHHHHhhccCceEEEEEecCceee
Confidence            998663    2  2222222 588888843

>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]

Probab=99.68  E-value=6.4e-16  Score=117.00  Aligned_cols=154  Identities=23%  Similarity=0.267  Sum_probs=127.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCC--CeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccccCC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRG--LTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFG  133 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g--~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~~~  133 (286)
                      +|.++|.||||-+|+.+++++++++  -+|+++.|+...  .....+.+.....|+..-+++...+.+.|+.|+|.|...
T Consensus        18 ~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~--d~at~k~v~q~~vDf~Kl~~~a~~~qg~dV~FcaLgTTR   95 (238)
T KOG4039|consen   18 NMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELP--DPATDKVVAQVEVDFSKLSQLATNEQGPDVLFCALGTTR   95 (238)
T ss_pred             ccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCC--CccccceeeeEEechHHHHHHHhhhcCCceEEEeecccc
Confidence            5789999999999999999999998  389999998522  122245777888899888888889999999999998874


Q ss_pred             C---cchhhhhhhHHHHHHHHHHHHcCCCEEEEEecCCcCCCCccccchHHHHHHHHHHHHHhCCCcEEEEeeCeeecCC
Q 023205          134 S---NSYMYKINGTANINAIRAASEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLTRYPYGGVILRPGFIYGTR  210 (286)
Q Consensus       134 ~---~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~~~~g~~~~ilRp~~v~g~~  210 (286)
                      .   .+-+++++-.....+.++|++.|+|+|+++||.  |........|.+.|.+.|+-+.+-.--.++|+|||.+.|..
T Consensus        96 gkaGadgfykvDhDyvl~~A~~AKe~Gck~fvLvSS~--GAd~sSrFlY~k~KGEvE~~v~eL~F~~~~i~RPG~ll~~R  173 (238)
T KOG4039|consen   96 GKAGADGFYKVDHDYVLQLAQAAKEKGCKTFVLVSSA--GADPSSRFLYMKMKGEVERDVIELDFKHIIILRPGPLLGER  173 (238)
T ss_pred             cccccCceEeechHHHHHHHHHHHhCCCeEEEEEecc--CCCcccceeeeeccchhhhhhhhccccEEEEecCcceeccc
Confidence            3   356778888888899999999999999999995  45555566799999999998877555589999999999987


Q ss_pred             CCC
Q 023205          211 TVG  213 (286)
Q Consensus       211 ~~~  213 (286)
                      ...
T Consensus       174 ~es  176 (238)
T KOG4039|consen  174 TES  176 (238)
T ss_pred             ccc
Confidence            643

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.68  E-value=5.1e-15  Score=124.72  Aligned_cols=210  Identities=14%  Similarity=-0.001  Sum_probs=139.4

Q ss_pred             CCeEEEEcCCC--hhHHHHHHHHHHCCCeEEEEecCCCc--cccccc--CCceeEEeccCCCHhHHHHHhc-------CC
Q 023205           56 SEKLLVLGGNG--FVGSHICREALDRGLTVASLSRSGRS--SLRDSW--ANNVIWHQGNLLSSDSWKEALD-------GV  122 (286)
Q Consensus        56 ~~~VlVtGatG--~iG~~l~~~Ll~~g~~V~~l~R~~~~--~~~~~~--~~~~~~i~~Dl~d~~~~~~~~~-------~~  122 (286)
                      .++++||||++  .||.++++.|+++|++|++..|+...  ...+..  .....++++|++|+++++++++       .+
T Consensus         8 ~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   87 (260)
T PRK06603          8 GKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEKWGSF   87 (260)
T ss_pred             CcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHHcCCc
Confidence            47899999997  89999999999999999988886321  111110  1123467899999998887764       47


Q ss_pred             CEEEEccccCCC--------------cchhhhhhhHHHHHHHHHHHHcC--CCEEEEEecCCcCCCCccccchHHHHHHH
Q 023205          123 TAVISCVGGFGS--------------NSYMYKINGTANINAIRAASEKG--VKRFVYISAADFGVANYLLQGYYEGKRAA  186 (286)
Q Consensus       123 d~vi~~a~~~~~--------------~~~~~~~~~~~~~~l~~~a~~~~--v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~  186 (286)
                      |++|||++....              ....+++|+.+...+++.+...-  -.+||++||............|+.+|...
T Consensus        88 DilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~~~~~~~Y~asKaal  167 (260)
T PRK06603         88 DFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDGGSIVTLTYYGAEKVIPNYNVMGVAKAAL  167 (260)
T ss_pred             cEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCceEEEEecCccccCCCcccchhhHHHHH
Confidence            999999985321              12456888888888877664321  24899999953222223346799999999


Q ss_pred             HHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHH
Q 023205          187 ETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAV  260 (286)
Q Consensus       187 E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~  260 (286)
                      +.+.+.      ..|++++.+.||.+-.+.... .       ....+......   ...|.     ..+...+|+|++++
T Consensus       168 ~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~-~-------~~~~~~~~~~~---~~~p~-----~r~~~pedva~~~~  231 (260)
T PRK06603        168 EASVKYLANDMGENNIRVNAISAGPIKTLASSA-I-------GDFSTMLKSHA---ATAPL-----KRNTTQEDVGGAAV  231 (260)
T ss_pred             HHHHHHHHHHhhhcCeEEEEEecCcCcchhhhc-C-------CCcHHHHHHHH---hcCCc-----CCCCCHHHHHHHHH
Confidence            986652      468999999999986542110 0       00001111111   11222     23578899999999


Q ss_pred             HHhcCCC--CCCCeeEecccccc
Q 023205          261 RAATDPV--FPPGIVDVHGILRY  281 (286)
Q Consensus       261 ~~l~~~~--~~~~~~~l~~~~~~  281 (286)
                      .++..+.  ..++.+.+.|...+
T Consensus       232 ~L~s~~~~~itG~~i~vdgG~~~  254 (260)
T PRK06603        232 YLFSELSKGVTGEIHYVDCGYNI  254 (260)
T ss_pred             HHhCcccccCcceEEEeCCcccc
Confidence            9997533  45778888776443

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.68  E-value=1.3e-15  Score=120.10  Aligned_cols=151  Identities=17%  Similarity=0.135  Sum_probs=115.6

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCCCccccc--------ccCCceeEEeccCCCHhHHHHHhcC------
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSLRD--------SWANNVIWHQGNLLSSDSWKEALDG------  121 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~~~--------~~~~~~~~i~~Dl~d~~~~~~~~~~------  121 (286)
                      ++++||||+|++|.+++++|+++|. .|+++.|+.......        ....++.++.+|+++++.++++++.      
T Consensus         1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   80 (180)
T smart00822        1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADRAALAAALAAIPARLG   80 (180)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            4799999999999999999999986 688888875442110        1134677899999998888776543      


Q ss_pred             -CCEEEEccccCCC----------cchhhhhhhHHHHHHHHHHHHcCCCEEEEEecCCcCCCCccccchHHHHHHHHHHH
Q 023205          122 -VTAVISCVGGFGS----------NSYMYKINGTANINAIRAASEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETEL  190 (286)
Q Consensus       122 -~d~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~  190 (286)
                       +|.|||+++....          ....+++|+.++.++++++++.+.++++++||............|+.+|...+.++
T Consensus        81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ii~~ss~~~~~~~~~~~~y~~sk~~~~~~~  160 (180)
T smart00822       81 PLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDLPLDFFVLFSSVAGVLGNPGQANYAAANAFLDALA  160 (180)
T ss_pred             CeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccCCcceEEEEccHHHhcCCCCchhhHHHHHHHHHHH
Confidence             6999999986421          13456889999999999998878889999999532222334567999999999977


Q ss_pred             HH--hCCCcEEEEeeCeee
Q 023205          191 LT--RYPYGGVILRPGFIY  207 (286)
Q Consensus       191 ~~--~~g~~~~ilRp~~v~  207 (286)
                      ..  ..+++++.+.||.+-
T Consensus       161 ~~~~~~~~~~~~~~~g~~~  179 (180)
T smart00822      161 AHRRARGLPATSINWGAWA  179 (180)
T ss_pred             HHHHhcCCceEEEeecccc
Confidence            53  578899999988763

It uses NADPH to reduce the keto group to a hydroxy group.

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.68  E-value=6.5e-15  Score=123.77  Aligned_cols=208  Identities=16%  Similarity=0.060  Sum_probs=138.6

Q ss_pred             CCeEEEEcC--CChhHHHHHHHHHHCCCeEEEEecCCCcc-cc---cccCCceeEEeccCCCHhHHHHHhc-------CC
Q 023205           56 SEKLLVLGG--NGFVGSHICREALDRGLTVASLSRSGRSS-LR---DSWANNVIWHQGNLLSSDSWKEALD-------GV  122 (286)
Q Consensus        56 ~~~VlVtGa--tG~iG~~l~~~Ll~~g~~V~~l~R~~~~~-~~---~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~  122 (286)
                      .++++||||  ++.||.+++++|+++|++|+++.|+.... ..   ......+.++.+|++|+++++++++       .+
T Consensus         7 ~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~i   86 (256)
T PRK07889          7 GKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLPEPAPVLELDVTNEEHLASLADRVREHVDGL   86 (256)
T ss_pred             CCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence            578999999  89999999999999999999998864221 11   1122357789999999988877653       58


Q ss_pred             CEEEEccccCCC--------------cchhhhhhhHHHHHHHHHHHHc--CCCEEEEEecCCcCCCCccccchHHHHHHH
Q 023205          123 TAVISCVGGFGS--------------NSYMYKINGTANINAIRAASEK--GVKRFVYISAADFGVANYLLQGYYEGKRAA  186 (286)
Q Consensus       123 d~vi~~a~~~~~--------------~~~~~~~~~~~~~~l~~~a~~~--~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~  186 (286)
                      |++|||||....              ....+++|+.++..+.+.+...  .-.++|++|+.. ....+....|+.+|...
T Consensus        87 D~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~g~Iv~is~~~-~~~~~~~~~Y~asKaal  165 (256)
T PRK07889         87 DGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNEGGSIVGLDFDA-TVAWPAYDWMGVAKAAL  165 (256)
T ss_pred             cEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhcccCceEEEEeecc-cccCCccchhHHHHHHH
Confidence            999999986421              0134688998888887776542  124789888642 11122345689999999


Q ss_pred             HHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHH
Q 023205          187 ETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAV  260 (286)
Q Consensus       187 E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~  260 (286)
                      +.+.+.      ..|++++.+.||.+-.+.....   +    + ... ......  ...|.    ...+...+|+|++++
T Consensus       166 ~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~---~----~-~~~-~~~~~~--~~~p~----~~~~~~p~evA~~v~  230 (256)
T PRK07889        166 ESTNRYLARDLGPRGIRVNLVAAGPIRTLAAKAI---P----G-FEL-LEEGWD--ERAPL----GWDVKDPTPVARAVV  230 (256)
T ss_pred             HHHHHHHHHHhhhcCeEEEeeccCcccChhhhcc---c----C-cHH-HHHHHH--hcCcc----ccccCCHHHHHHHHH
Confidence            886653      4789999999999865422100   0    0 000 111100  01121    113578899999999


Q ss_pred             HHhcCCC--CCCCeeEecccc
Q 023205          261 RAATDPV--FPPGIVDVHGIL  279 (286)
Q Consensus       261 ~~l~~~~--~~~~~~~l~~~~  279 (286)
                      .++.++.  ..++++.+.|..
T Consensus       231 ~l~s~~~~~~tG~~i~vdgg~  251 (256)
T PRK07889        231 ALLSDWFPATTGEIVHVDGGA  251 (256)
T ss_pred             HHhCcccccccceEEEEcCce
Confidence            9997543  457778777653

>PRK06484 short chain dehydrogenase; Validated

Probab=99.67  E-value=3.5e-15  Score=137.89  Aligned_cols=208  Identities=18%  Similarity=0.127  Sum_probs=141.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc--cccCCceeEEeccCCCHhHHHHHhc-------CCCEEE
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSWANNVIWHQGNLLSSDSWKEALD-------GVTAVI  126 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~--~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d~vi  126 (286)
                      .++++||||+++||.++++.|+++|++|+++.|+.++...  .....++.++.+|++|+++++++++       .+|++|
T Consensus         5 ~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~li   84 (520)
T PRK06484          5 SRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHREFGRIDVLV   84 (520)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHHhCCCCEEE
Confidence            5789999999999999999999999999999998654221  1123467789999999998877764       489999


Q ss_pred             EccccCCC------------cchhhhhhhHHHHHHHHHHHHc----CCC-EEEEEecCCcCCCCccccchHHHHHHHHHH
Q 023205          127 SCVGGFGS------------NSYMYKINGTANINAIRAASEK----GVK-RFVYISAADFGVANYLLQGYYEGKRAAETE  189 (286)
Q Consensus       127 ~~a~~~~~------------~~~~~~~~~~~~~~l~~~a~~~----~v~-~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~  189 (286)
                      ||||....            ....+++|+.++..+++++...    +.. +||++||...-........|+.+|...+.+
T Consensus        85 ~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~~~~~~~Y~asKaal~~l  164 (520)
T PRK06484         85 NNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVALPKRTAYSASKAAVISL  164 (520)
T ss_pred             ECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCCCCCCchHHHHHHHHHHH
Confidence            99986311            1356789999999888777542    333 899999953322333456899999999986


Q ss_pred             HHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHh
Q 023205          190 LLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAA  263 (286)
Q Consensus       190 ~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l  263 (286)
                      .+.      ..+++++.++||.+..+......  ..   ...   ......  ..++.     ..+...+|+|+++..++
T Consensus       165 ~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~--~~---~~~---~~~~~~--~~~~~-----~~~~~~~~va~~v~~l~  229 (520)
T PRK06484        165 TRSLACEWAAKGIRVNAVLPGYVRTQMVAELE--RA---GKL---DPSAVR--SRIPL-----GRLGRPEEIAEAVFFLA  229 (520)
T ss_pred             HHHHHHHhhhhCeEEEEEccCCcCchhhhhhc--cc---chh---hhHHHH--hcCCC-----CCCcCHHHHHHHHHHHh
Confidence            642      46899999999988654321100  00   000   000000  01111     13468899999999988


Q ss_pred             cCC--CCCCCeeEeccc
Q 023205          264 TDP--VFPPGIVDVHGI  278 (286)
Q Consensus       264 ~~~--~~~~~~~~l~~~  278 (286)
                      ..+  ...++.+.+.+.
T Consensus       230 ~~~~~~~~G~~~~~~gg  246 (520)
T PRK06484        230 SDQASYITGSTLVVDGG  246 (520)
T ss_pred             CccccCccCceEEecCC
Confidence            753  234566665543

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.67  E-value=1.3e-14  Score=122.27  Aligned_cols=208  Identities=14%  Similarity=0.080  Sum_probs=137.8

Q ss_pred             CCeEEEEcC--CChhHHHHHHHHHHCCCeEEEEecCCC--cccccc--cCCceeEEeccCCCHhHHHHHhc-------CC
Q 023205           56 SEKLLVLGG--NGFVGSHICREALDRGLTVASLSRSGR--SSLRDS--WANNVIWHQGNLLSSDSWKEALD-------GV  122 (286)
Q Consensus        56 ~~~VlVtGa--tG~iG~~l~~~Ll~~g~~V~~l~R~~~--~~~~~~--~~~~~~~i~~Dl~d~~~~~~~~~-------~~  122 (286)
                      .++++||||  ++.||.+++++|+++|++|++..|...  +...+.  ......++.+|++|+++++++++       .+
T Consensus         6 ~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   85 (260)
T PRK06997          6 GKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQHWDGL   85 (260)
T ss_pred             CcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHHhCCC
Confidence            578999996  679999999999999999998865421  111110  11233468999999998887764       47


Q ss_pred             CEEEEccccCCC---------------cchhhhhhhHHHHHHHHHHHHc--CCCEEEEEecCCcCCCCccccchHHHHHH
Q 023205          123 TAVISCVGGFGS---------------NSYMYKINGTANINAIRAASEK--GVKRFVYISAADFGVANYLLQGYYEGKRA  185 (286)
Q Consensus       123 d~vi~~a~~~~~---------------~~~~~~~~~~~~~~l~~~a~~~--~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~  185 (286)
                      |++|||||....               ....+++|+.+...+.+++...  +-.++|++||............|+.+|..
T Consensus        86 D~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~~g~Ii~iss~~~~~~~~~~~~Y~asKaa  165 (260)
T PRK06997         86 DGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERVVPNYNTMGLAKAS  165 (260)
T ss_pred             cEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeccccccCCCCcchHHHHHHH
Confidence            999999986421               0134678999988888777543  22589999985322223345679999999


Q ss_pred             HHHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHH
Q 023205          186 AETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVA  259 (286)
Q Consensus       186 ~E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~  259 (286)
                      .+.+.+.      ..|++++.|.||.+-.+... .+       ...-+. .....  ...|.     ..+..++|+|+++
T Consensus       166 l~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~-~~-------~~~~~~-~~~~~--~~~p~-----~r~~~pedva~~~  229 (260)
T PRK06997        166 LEASVRYLAVSLGPKGIRANGISAGPIKTLAAS-GI-------KDFGKI-LDFVE--SNAPL-----RRNVTIEEVGNVA  229 (260)
T ss_pred             HHHHHHHHHHHhcccCeEEEEEeeCccccchhc-cc-------cchhhH-HHHHH--hcCcc-----cccCCHHHHHHHH
Confidence            9886652      46899999999988653211 00       000010 11111  11222     2357889999999


Q ss_pred             HHHhcCC--CCCCCeeEecccc
Q 023205          260 VRAATDP--VFPPGIVDVHGIL  279 (286)
Q Consensus       260 ~~~l~~~--~~~~~~~~l~~~~  279 (286)
                      ..++..+  ...++++.+.|..
T Consensus       230 ~~l~s~~~~~itG~~i~vdgg~  251 (260)
T PRK06997        230 AFLLSDLASGVTGEITHVDSGF  251 (260)
T ss_pred             HHHhCccccCcceeEEEEcCCh
Confidence            9999753  3457788887654

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=99.65  E-value=2e-15  Score=126.86  Aligned_cols=195  Identities=15%  Similarity=0.069  Sum_probs=128.8

Q ss_pred             eEEEEcCCChhHHHHHHHHHH----CCCeEEEEecCCCcccc---cc----cCCceeEEeccCCCHhHHHHHhcC-----
Q 023205           58 KLLVLGGNGFVGSHICREALD----RGLTVASLSRSGRSSLR---DS----WANNVIWHQGNLLSSDSWKEALDG-----  121 (286)
Q Consensus        58 ~VlVtGatG~iG~~l~~~Ll~----~g~~V~~l~R~~~~~~~---~~----~~~~~~~i~~Dl~d~~~~~~~~~~-----  121 (286)
                      .++||||+++||.+++++|++    +|++|+++.|+.+....   +.    ...++.++.+|++|.++++++++.     
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   81 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALRELP   81 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhcc
Confidence            589999999999999999997    79999999998654211   11    123688899999999988876642     


Q ss_pred             ------CCEEEEccccCCC---------c----chhhhhhhHHHHHHHHHHHH----c-C-CCEEEEEecCCcCCCCccc
Q 023205          122 ------VTAVISCVGGFGS---------N----SYMYKINGTANINAIRAASE----K-G-VKRFVYISAADFGVANYLL  176 (286)
Q Consensus       122 ------~d~vi~~a~~~~~---------~----~~~~~~~~~~~~~l~~~a~~----~-~-v~~~v~~Ss~~~~~~~~~~  176 (286)
                            .|+||||||....         .    ...+++|+.++..+.+.+..    . + ..+||++||...-...+..
T Consensus        82 g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~~~~~~  161 (256)
T TIGR01500        82 RPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQPFKGW  161 (256)
T ss_pred             ccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhCCCCCCc
Confidence                  2589999985321         1    13567899998877666543    2 2 2489999995322223345


Q ss_pred             cchHHHHHHHHHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCc
Q 023205          177 QGYYEGKRAAETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPV  250 (286)
Q Consensus       177 ~~y~~sK~~~E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i  250 (286)
                      ..|+.+|...+.+.+.      ..|++++.+.||++-.+......  +...-....+.+..      ..|     ...+.
T Consensus       162 ~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~--~~~~~~~~~~~~~~------~~~-----~~~~~  228 (256)
T TIGR01500       162 ALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTDMQQQVR--EESVDPDMRKGLQE------LKA-----KGKLV  228 (256)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccchHHHHHH--HhcCChhHHHHHHH------HHh-----cCCCC
Confidence            6799999999987653      46899999999998644211000  00000000011110      011     12367


Q ss_pred             cHHHHHHHHHHHhcC
Q 023205          251 NVTVVAKVAVRAATD  265 (286)
Q Consensus       251 ~v~Dva~~~~~~l~~  265 (286)
                      .++|+|++++.++.+
T Consensus       229 ~p~eva~~~~~l~~~  243 (256)
T TIGR01500       229 DPKVSAQKLLSLLEK  243 (256)
T ss_pred             CHHHHHHHHHHHHhc
Confidence            899999999999964

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=99.62  E-value=1.9e-14  Score=124.46  Aligned_cols=198  Identities=12%  Similarity=0.026  Sum_probs=129.1

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCC-CeEEEEecCCCcccc---cc--cCCceeEEeccCCCHhHHHHHhc-------C
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRG-LTVASLSRSGRSSLR---DS--WANNVIWHQGNLLSSDSWKEALD-------G  121 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g-~~V~~l~R~~~~~~~---~~--~~~~~~~i~~Dl~d~~~~~~~~~-------~  121 (286)
                      |.++++||||+++||.++++.|+++| ++|+++.|+.++...   +.  ....+.++.+|++|.++++++++       +
T Consensus         2 ~~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   81 (314)
T TIGR01289         2 QKPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRP   81 (314)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            46789999999999999999999999 999999998654211   11  12357889999999988776653       5


Q ss_pred             CCEEEEccccCCC-----------cchhhhhhhHHHHHHHHHHH----HcC--CCEEEEEecCCc-CC------------
Q 023205          122 VTAVISCVGGFGS-----------NSYMYKINGTANINAIRAAS----EKG--VKRFVYISAADF-GV------------  171 (286)
Q Consensus       122 ~d~vi~~a~~~~~-----------~~~~~~~~~~~~~~l~~~a~----~~~--v~~~v~~Ss~~~-~~------------  171 (286)
                      +|++|||||....           ....+++|+.++..+++.+.    +.+  ..+||++||... ..            
T Consensus        82 iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~  161 (314)
T TIGR01289        82 LDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNTNTLAGNVPPKANL  161 (314)
T ss_pred             CCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccccccCCCcCCCcccc
Confidence            8999999986421           12346899999887766653    332  359999999521 00            


Q ss_pred             --------------------CCccccchHHHHHHHHHHHHH-------hCCCcEEEEeeCeeecCCCCCccccCccccCc
Q 023205          172 --------------------ANYLLQGYYEGKRAAETELLT-------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGS  224 (286)
Q Consensus       172 --------------------~~~~~~~y~~sK~~~E~~~~~-------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~  224 (286)
                                          ...+...|+.||.....+.++       ..|+.++.++||.+.........       ..
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~T~l~~~~-------~~  234 (314)
T TIGR01289       162 GDLSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIADTGLFREH-------VP  234 (314)
T ss_pred             cccccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCcccCCcccccc-------cH
Confidence                                001234699999996654432       24799999999998533221110       00


Q ss_pred             hHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcCCC
Q 023205          225 PMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDPV  267 (286)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~~  267 (286)
                      ....+.....   ....     ..+.+.++.|+.++.++..+.
T Consensus       235 ~~~~~~~~~~---~~~~-----~~~~~~~~~a~~l~~~~~~~~  269 (314)
T TIGR01289       235 LFRTLFPPFQ---KYIT-----KGYVSEEEAGERLAQVVSDPK  269 (314)
T ss_pred             HHHHHHHHHH---HHHh-----ccccchhhhhhhhHHhhcCcc
Confidence            0000000000   0000     124688999999999887643

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.61  E-value=7.5e-14  Score=115.28  Aligned_cols=186  Identities=18%  Similarity=0.136  Sum_probs=133.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc---ccc-CCceeEEeccCCCHhHHHHHh-------cCCCE
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR---DSW-ANNVIWHQGNLLSSDSWKEAL-------DGVTA  124 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~---~~~-~~~~~~i~~Dl~d~~~~~~~~-------~~~d~  124 (286)
                      ++.||||||++.+|+.++.+++++|..+.+.+.+.+...+   +.. ..++....+|++|.+++.+..       ..+|+
T Consensus        38 g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e~G~V~I  117 (300)
T KOG1201|consen   38 GEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKEVGDVDI  117 (300)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHhcCCceE
Confidence            5789999999999999999999999999898888765322   111 126889999999998876654       35899


Q ss_pred             EEEccccCCCc----------chhhhhhhHHHHHHHHHH----HHcCCCEEEEEecCCcCCCCccccchHHHHHHHHHHH
Q 023205          125 VISCVGGFGSN----------SYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETEL  190 (286)
Q Consensus       125 vi~~a~~~~~~----------~~~~~~~~~~~~~l~~~a----~~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~  190 (286)
                      +|+|||.....          ...+++|+.+.....++.    .+.+-.++|-++|+..-........|..||..+..+.
T Consensus       118 LVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~~g~~gl~~YcaSK~a~vGfh  197 (300)
T KOG1201|consen  118 LVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVAGLFGPAGLADYCASKFAAVGFH  197 (300)
T ss_pred             EEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhhcccCCccchhhhhhHHHHHHHH
Confidence            99999976321          256789988877655554    4555569999999633333344678999999877643


Q ss_pred             H---------HhCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHH
Q 023205          191 L---------TRYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVR  261 (286)
Q Consensus       191 ~---------~~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~  261 (286)
                      .         ...|++.+.+.|+.+-...-.+                      ..+.    ....+.+..+.+|+.|++
T Consensus       198 esL~~EL~~~~~~~IktTlv~P~~i~Tgmf~~----------------------~~~~----~~l~P~L~p~~va~~Iv~  251 (300)
T KOG1201|consen  198 ESLSMELRALGKDGIKTTLVCPYFINTGMFDG----------------------ATPF----PTLAPLLEPEYVAKRIVE  251 (300)
T ss_pred             HHHHHHHHhcCCCCeeEEEEeeeeccccccCC----------------------CCCC----ccccCCCCHHHHHHHHHH
Confidence            2         1457999999998885211110                      0011    224567899999999999


Q ss_pred             HhcCCC
Q 023205          262 AATDPV  267 (286)
Q Consensus       262 ~l~~~~  267 (286)
                      ++..++
T Consensus       252 ai~~n~  257 (300)
T KOG1201|consen  252 AILTNQ  257 (300)
T ss_pred             HHHcCC
Confidence            997655

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=99.60  E-value=3.3e-13  Score=113.56  Aligned_cols=217  Identities=17%  Similarity=0.095  Sum_probs=147.1

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc--------cccCCceeEEeccCCCHhHHHHHh------
Q 023205           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--------DSWANNVIWHQGNLLSSDSWKEAL------  119 (286)
Q Consensus        54 ~~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~--------~~~~~~~~~i~~Dl~d~~~~~~~~------  119 (286)
                      ...|.++|||++..||++++++|.+.|.+|+...|+.+....        .....++..+.+|+++.+++++++      
T Consensus         6 l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~~   85 (270)
T KOG0725|consen    6 LAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVEK   85 (270)
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHHH
Confidence            457899999999999999999999999999999998765211        111346889999999887655543      


Q ss_pred             --cCCCEEEEccccCCCc-----------chhhhhhhHH-HHHHHHHHHH----cCCCEEEEEecCCcCCCCccc-cchH
Q 023205          120 --DGVTAVISCVGGFGSN-----------SYMYKINGTA-NINAIRAASE----KGVKRFVYISAADFGVANYLL-QGYY  180 (286)
Q Consensus       120 --~~~d~vi~~a~~~~~~-----------~~~~~~~~~~-~~~l~~~a~~----~~v~~~v~~Ss~~~~~~~~~~-~~y~  180 (286)
                        ..+|++++|||.....           +..+++|+.| ...+.+++..    .+-..++++||..+.....+. ..|+
T Consensus        86 ~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~~~~~~~~~Y~  165 (270)
T KOG0725|consen   86 FFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVGPGPGSGVAYG  165 (270)
T ss_pred             hCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEeccccccCCCCCcccch
Confidence              3589999999975422           3556788885 4455555543    344578888886444333333 6899


Q ss_pred             HHHHHHHHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHH
Q 023205          181 EGKRAAETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTV  254 (286)
Q Consensus       181 ~sK~~~E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D  254 (286)
                      .+|...+++.+.      ..|++++++-||.+..+.....+  .    ....+.+.........+|.     ..+...+|
T Consensus       166 ~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~~~~~~--~----~~~~~~~~~~~~~~~~~p~-----gr~g~~~e  234 (270)
T KOG0725|consen  166 VSKAALLQLTRSLAKELAKHGIRVNSVSPGLVKTSLRAAGL--D----DGEMEEFKEATDSKGAVPL-----GRVGTPEE  234 (270)
T ss_pred             hHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCcccccc--c----cchhhHHhhhhcccccccc-----CCccCHHH
Confidence            999999997763      67999999999999876511110  0    0011112221111122222     24578899


Q ss_pred             HHHHHHHHhcCC--CCCCCeeEecccccc
Q 023205          255 VAKVAVRAATDP--VFPPGIVDVHGILRY  281 (286)
Q Consensus       255 va~~~~~~l~~~--~~~~~~~~l~~~~~~  281 (286)
                      +|+++..++...  ...|+.+.+.|...+
T Consensus       235 va~~~~fla~~~asyitG~~i~vdgG~~~  263 (270)
T KOG0725|consen  235 VAEAAAFLASDDASYITGQTIIVDGGFTV  263 (270)
T ss_pred             HHHhHHhhcCcccccccCCEEEEeCCEEe
Confidence            999999988764  345777777776544

>PRK08862 short chain dehydrogenase; Provisional

Probab=99.59  E-value=4.6e-14  Score=116.39  Aligned_cols=151  Identities=11%  Similarity=0.036  Sum_probs=109.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc-----cccCCceeEEeccCCCHhHHHHHh-------c-CC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEAL-------D-GV  122 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~-----~~~~~~~~~i~~Dl~d~~~~~~~~-------~-~~  122 (286)
                      .++++||||++.||..++++|+++|++|+++.|+.++...     .....++..+.+|+.|++++++++       . .+
T Consensus         5 ~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~i   84 (227)
T PRK08862          5 SSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNRAP   84 (227)
T ss_pred             CeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence            5789999999999999999999999999999998754211     011245778889999998887665       3 58


Q ss_pred             CEEEEccccCCC-------c----chhhhhhhHHHHHHHHHH----HHcC-CCEEEEEecCCcCCCCccccchHHHHHHH
Q 023205          123 TAVISCVGGFGS-------N----SYMYKINGTANINAIRAA----SEKG-VKRFVYISAADFGVANYLLQGYYEGKRAA  186 (286)
Q Consensus       123 d~vi~~a~~~~~-------~----~~~~~~~~~~~~~l~~~a----~~~~-v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~  186 (286)
                      |++|||+|....       +    ...+..|..+...+++.+    ++.+ -..+|++||.. +.  .....|+.+|...
T Consensus        85 D~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~-~~--~~~~~Y~asKaal  161 (227)
T PRK08862         85 DVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHD-DH--QDLTGVESSNALV  161 (227)
T ss_pred             CEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCC-CC--CCcchhHHHHHHH
Confidence            999999974311       1    123455666665554443    3332 35899999842 21  2356799999999


Q ss_pred             HHHHHH------hCCCcEEEEeeCeeecC
Q 023205          187 ETELLT------RYPYGGVILRPGFIYGT  209 (286)
Q Consensus       187 E~~~~~------~~g~~~~ilRp~~v~g~  209 (286)
                      +.+.+.      ..|++++.|.||.+-.+
T Consensus       162 ~~~~~~la~el~~~~Irvn~v~PG~i~t~  190 (227)
T PRK08862        162 SGFTHSWAKELTPFNIRVGGVVPSIFSAN  190 (227)
T ss_pred             HHHHHHHHHHHhhcCcEEEEEecCcCcCC
Confidence            886653      46899999999988655

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=99.59  E-value=1.3e-13  Score=106.24  Aligned_cols=205  Identities=19%  Similarity=0.170  Sum_probs=141.9

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc--cccC--CceeEEeccCCCHhHHHHHhc-------CCC
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSWA--NNVIWHQGNLLSSDSWKEALD-------GVT  123 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~--~~~~--~~~~~i~~Dl~d~~~~~~~~~-------~~d  123 (286)
                      +.+..+||||+..||+++++.|.+.|++|.+.+++......  ....  .+...+.+|++++++++..++       ..+
T Consensus        13 ~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~ps   92 (256)
T KOG1200|consen   13 MSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLGTPS   92 (256)
T ss_pred             hcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhcCCCc
Confidence            45689999999999999999999999999999998764321  1122  356778999999988877665       369


Q ss_pred             EEEEccccCC----------CcchhhhhhhHHHHHHHHHHHHc----C--CCEEEEEecCCcCCCCccccchHHHHH---
Q 023205          124 AVISCVGGFG----------SNSYMYKINGTANINAIRAASEK----G--VKRFVYISAADFGVANYLLQGYYEGKR---  184 (286)
Q Consensus       124 ~vi~~a~~~~----------~~~~~~~~~~~~~~~l~~~a~~~----~--v~~~v~~Ss~~~~~~~~~~~~y~~sK~---  184 (286)
                      ++++|||...          ++...+.+|..|...+-+++.+.    +  .-+||.+||++--.-+.....|+++|.   
T Consensus        93 vlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGkiGN~GQtnYAAsK~GvI  172 (256)
T KOG1200|consen   93 VLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKIGNFGQTNYAASKGGVI  172 (256)
T ss_pred             EEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhcccccccchhhhhhcCcee
Confidence            9999999763          34567789999998877777553    2  228999999753333334556777765   


Q ss_pred             -----HHHHHHHHhCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHH
Q 023205          185 -----AAETELLTRYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVA  259 (286)
Q Consensus       185 -----~~E~~~~~~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~  259 (286)
                           ++.++  ...+++++++-||++-.|.....           -+.+...+.  +.+|..     .+-..+|+|..+
T Consensus       173 gftktaArEl--a~knIrvN~VlPGFI~tpMT~~m-----------p~~v~~ki~--~~iPmg-----r~G~~EevA~~V  232 (256)
T KOG1200|consen  173 GFTKTAAREL--ARKNIRVNVVLPGFIATPMTEAM-----------PPKVLDKIL--GMIPMG-----RLGEAEEVANLV  232 (256)
T ss_pred             eeeHHHHHHH--hhcCceEeEeccccccChhhhhc-----------CHHHHHHHH--ccCCcc-----ccCCHHHHHHHH
Confidence                 33321  24789999999999987654211           112222222  233331     234679999999


Q ss_pred             HHHhcCCC--CCCCeeEecccc
Q 023205          260 VRAATDPV--FPPGIVDVHGIL  279 (286)
Q Consensus       260 ~~~l~~~~--~~~~~~~l~~~~  279 (286)
                      +.++....  ..|..++++|+-
T Consensus       233 ~fLAS~~ssYiTG~t~evtGGl  254 (256)
T KOG1200|consen  233 LFLASDASSYITGTTLEVTGGL  254 (256)
T ss_pred             HHHhccccccccceeEEEeccc
Confidence            98885433  346788887753

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=99.57  E-value=3.1e-13  Score=115.63  Aligned_cols=215  Identities=10%  Similarity=0.012  Sum_probs=137.2

Q ss_pred             CCCCeEEEEcC--CChhHHHHHHHHHHCCCeEEEEecCCCcc------ccc--------cc----CCceeEEeccC--CC
Q 023205           54 PPSEKLLVLGG--NGFVGSHICREALDRGLTVASLSRSGRSS------LRD--------SW----ANNVIWHQGNL--LS  111 (286)
Q Consensus        54 ~~~~~VlVtGa--tG~iG~~l~~~Ll~~g~~V~~l~R~~~~~------~~~--------~~----~~~~~~i~~Dl--~d  111 (286)
                      ...|+++||||  +..||.++++.|.+.|.+|++ .|+.++.      ...        ..    ......+.+|+  .+
T Consensus         7 l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   85 (303)
T PLN02730          7 LRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVFDT   85 (303)
T ss_pred             CCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceecCc
Confidence            34689999999  799999999999999999988 5543221      000        00    01245778888  32


Q ss_pred             Hh------------------HHHHHhc-------CCCEEEEccccCC------------CcchhhhhhhHHHHHHHHHHH
Q 023205          112 SD------------------SWKEALD-------GVTAVISCVGGFG------------SNSYMYKINGTANINAIRAAS  154 (286)
Q Consensus       112 ~~------------------~~~~~~~-------~~d~vi~~a~~~~------------~~~~~~~~~~~~~~~l~~~a~  154 (286)
                      ++                  +++++++       .+|++|||||...            .....+++|+.+...+.+++.
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~~~~  165 (303)
T PLN02730         86 PEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQHFG  165 (303)
T ss_pred             cccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence            22                  4554443       5899999996321            123567899999988888765


Q ss_pred             HcC--CCEEEEEecCCcCCCCccc-cchHHHHHHHHHHHHH------h-CCCcEEEEeeCeeecCCCCCccccCccccCc
Q 023205          155 EKG--VKRFVYISAADFGVANYLL-QGYYEGKRAAETELLT------R-YPYGGVILRPGFIYGTRTVGGMKLPLGVIGS  224 (286)
Q Consensus       155 ~~~--v~~~v~~Ss~~~~~~~~~~-~~y~~sK~~~E~~~~~------~-~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~  224 (286)
                      ..-  -.++|++||.......+.. ..|+.+|...+.+.+.      . .|++++.|.||.+-.+.... .  +     .
T Consensus       166 p~m~~~G~II~isS~a~~~~~p~~~~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~PG~v~T~~~~~-~--~-----~  237 (303)
T PLN02730        166 PIMNPGGASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKYKIRVNTISAGPLGSRAAKA-I--G-----F  237 (303)
T ss_pred             HHHhcCCEEEEEechhhcCCCCCCchhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEeeCCccCchhhc-c--c-----c
Confidence            431  1589999995322222223 3699999999986642      2 58999999999886543211 0  0     0


Q ss_pred             hHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcCC--CCCCCeeEecccccccccC
Q 023205          225 PMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDP--VFPPGIVDVHGILRYSQKS  285 (286)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~--~~~~~~~~l~~~~~~s~~~  285 (286)
                      ..+.. ....  ...|.     ..+...+|+|.+++.++...  ...++.+.+.|.....|..
T Consensus       238 ~~~~~-~~~~--~~~pl-----~r~~~peevA~~~~fLaS~~a~~itG~~l~vdGG~~~~g~~  292 (303)
T PLN02730        238 IDDMI-EYSY--ANAPL-----QKELTADEVGNAAAFLASPLASAITGATIYVDNGLNAMGLA  292 (303)
T ss_pred             cHHHH-HHHH--hcCCC-----CCCcCHHHHHHHHHHHhCccccCccCCEEEECCCccccccC
Confidence            00111 1100  11121     13467899999999999743  3467888888877666654

>PRK08303 short chain dehydrogenase; Provisional

Probab=99.57  E-value=1.1e-13  Score=119.22  Aligned_cols=197  Identities=18%  Similarity=0.165  Sum_probs=128.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcc---------cc------cccCCceeEEeccCCCHhHHHHHhc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSS---------LR------DSWANNVIWHQGNLLSSDSWKEALD  120 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~---------~~------~~~~~~~~~i~~Dl~d~~~~~~~~~  120 (286)
                      .++++||||++.||.+++++|++.|++|+++.|+..+.         ..      .....++.++++|++|+++++++++
T Consensus         8 ~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~   87 (305)
T PRK08303          8 GKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRALVE   87 (305)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHH
Confidence            57999999999999999999999999999999974311         00      0112357789999999988876654


Q ss_pred             -------CCCEEEEcc-ccC------CC--------cchhhhhhhHHHHHHHHHHHH----cCCCEEEEEecCCc--CCC
Q 023205          121 -------GVTAVISCV-GGF------GS--------NSYMYKINGTANINAIRAASE----KGVKRFVYISAADF--GVA  172 (286)
Q Consensus       121 -------~~d~vi~~a-~~~------~~--------~~~~~~~~~~~~~~l~~~a~~----~~v~~~v~~Ss~~~--~~~  172 (286)
                             .+|++|||| |..      .+        ....+++|+.+...+++++..    .+-.+||++||...  ...
T Consensus        88 ~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~g~IV~isS~~~~~~~~  167 (305)
T PRK08303         88 RIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPGGLVVEITDGTAEYNAT  167 (305)
T ss_pred             HHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCCcEEEEECCccccccCc
Confidence                   579999999 631      10        113456788888777666543    33358999998432  111


Q ss_pred             -CccccchHHHHHHHHHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCc
Q 023205          173 -NYLLQGYYEGKRAAETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPL  245 (286)
Q Consensus       173 -~~~~~~y~~sK~~~E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  245 (286)
                       ......|+.+|...+.+.+.      ..|++++.|.||.+-.+.........    .   +.+...   ....|.    
T Consensus       168 ~~~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~T~~~~~~~~~~----~---~~~~~~---~~~~p~----  233 (305)
T PRK08303        168 HYRLSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRSEMMLDAFGVT----E---ENWRDA---LAKEPH----  233 (305)
T ss_pred             CCCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccccHHHHHhhccC----c---cchhhh---hccccc----
Confidence             11245699999999887642      46899999999988543210000000    0   000000   001121    


Q ss_pred             cCCCccHHHHHHHHHHHhcCC
Q 023205          246 FTPPVNVTVVAKVAVRAATDP  266 (286)
Q Consensus       246 ~~~~i~v~Dva~~~~~~l~~~  266 (286)
                      ...+...+|+|++++.++..+
T Consensus       234 ~~~~~~peevA~~v~fL~s~~  254 (305)
T PRK08303        234 FAISETPRYVGRAVAALAADP  254 (305)
T ss_pred             cccCCCHHHHHHHHHHHHcCc
Confidence            112357899999999999765

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=99.56  E-value=2.4e-14  Score=119.26  Aligned_cols=201  Identities=18%  Similarity=0.115  Sum_probs=139.0

Q ss_pred             cCC--ChhHHHHHHHHHHCCCeEEEEecCCCcc---ccc-ccCCceeEEeccCCCHhHHHHHh--------cCCCEEEEc
Q 023205           63 GGN--GFVGSHICREALDRGLTVASLSRSGRSS---LRD-SWANNVIWHQGNLLSSDSWKEAL--------DGVTAVISC  128 (286)
Q Consensus        63 Gat--G~iG~~l~~~Ll~~g~~V~~l~R~~~~~---~~~-~~~~~~~~i~~Dl~d~~~~~~~~--------~~~d~vi~~  128 (286)
                      |++  +.||.+++++|+++|++|++..|+.++.   ..+ ....+.+++.+|++|++++++++        ..+|++|||
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~g~iD~lV~~   80 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYGAEVIQCDLSDEESVEALFDEAVERFGGRIDILVNN   80 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTTSEEEESCTTSHHHHHHHHHHHHHHHCSSESEEEEE
T ss_pred             CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcCCceEeecCcchHHHHHHHHHHHhhcCCCeEEEEec
Confidence            566  9999999999999999999999997752   111 11123457999999998887764        457999999


Q ss_pred             cccCCC-----c---------chhhhhhhHHHHHHHHHHHHc--CCCEEEEEecCCcCCCCccccchHHHHHHHHHHHHH
Q 023205          129 VGGFGS-----N---------SYMYKINGTANINAIRAASEK--GVKRFVYISAADFGVANYLLQGYYEGKRAAETELLT  192 (286)
Q Consensus       129 a~~~~~-----~---------~~~~~~~~~~~~~l~~~a~~~--~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~~  192 (286)
                      ++....     +         ...+++|+.+...+++.+.+.  .-.++|++||.......+....|+.+|...+.+.+.
T Consensus        81 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsii~iss~~~~~~~~~~~~y~~sKaal~~l~r~  160 (241)
T PF13561_consen   81 AGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGGSIINISSIAAQRPMPGYSAYSASKAALEGLTRS  160 (241)
T ss_dssp             EESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEEEGGGTSBSTTTHHHHHHHHHHHHHHHH
T ss_pred             ccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccccchhhcccCccchhhHHHHHHHHHHHHH
Confidence            986532     1         234578888888888877542  124799999864444444556899999999997753


Q ss_pred             ------h-CCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcC
Q 023205          193 ------R-YPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATD  265 (286)
Q Consensus       193 ------~-~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~  265 (286)
                            . .|+++++|.||.+..+.....        .. .+.+.....  ...|+     ..+...+|+|+++..++.+
T Consensus       161 lA~el~~~~gIrVN~V~pG~i~t~~~~~~--------~~-~~~~~~~~~--~~~pl-----~r~~~~~evA~~v~fL~s~  224 (241)
T PF13561_consen  161 LAKELAPKKGIRVNAVSPGPIETPMTERI--------PG-NEEFLEELK--KRIPL-----GRLGTPEEVANAVLFLASD  224 (241)
T ss_dssp             HHHHHGGHGTEEEEEEEESSBSSHHHHHH--------HT-HHHHHHHHH--HHSTT-----SSHBEHHHHHHHHHHHHSG
T ss_pred             HHHHhccccCeeeeeecccceeccchhcc--------cc-ccchhhhhh--hhhcc-----CCCcCHHHHHHHHHHHhCc
Confidence                  5 799999999999975431100        00 011111111  11222     2346899999999999986


Q ss_pred             C--CCCCCeeEecccc
Q 023205          266 P--VFPPGIVDVHGIL  279 (286)
Q Consensus       266 ~--~~~~~~~~l~~~~  279 (286)
                      .  ...|+++.+.|+-
T Consensus       225 ~a~~itG~~i~vDGG~  240 (241)
T PF13561_consen  225 AASYITGQVIPVDGGF  240 (241)
T ss_dssp             GGTTGTSEEEEESTTG
T ss_pred             cccCccCCeEEECCCc
Confidence            5  4568888888763

...

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=99.56  E-value=6.1e-14  Score=109.95  Aligned_cols=135  Identities=18%  Similarity=0.216  Sum_probs=104.9

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCC-CeEEEEecCC--Cccc---c--cccCCceeEEeccCCCHhHHHHHhc-------C
Q 023205           57 EKLLVLGGNGFVGSHICREALDRG-LTVASLSRSG--RSSL---R--DSWANNVIWHQGNLLSSDSWKEALD-------G  121 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g-~~V~~l~R~~--~~~~---~--~~~~~~~~~i~~Dl~d~~~~~~~~~-------~  121 (286)
                      |+++||||+|.||..++++|+++| +.|+++.|++  +...   .  .....++.++++|+++.++++++++       .
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP   80 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            579999999999999999999995 5788888881  1111   0  1124689999999999988887764       5


Q ss_pred             CCEEEEccccCCCc----------chhhhhhhHHHHHHHHHHHHcCCCEEEEEecCCcCCCCccccchHHHHHHHHHHHH
Q 023205          122 VTAVISCVGGFGSN----------SYMYKINGTANINAIRAASEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELL  191 (286)
Q Consensus       122 ~d~vi~~a~~~~~~----------~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~  191 (286)
                      +|++|||+|.....          ...+++|+.+...+.+++...+-.+||++||.......+....|..+|...+.+..
T Consensus        81 ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~askaal~~~~~  160 (167)
T PF00106_consen   81 LDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLPQGGGKIVNISSIAGVRGSPGMSAYSASKAALRGLTQ  160 (167)
T ss_dssp             ESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHTTEEEEEEEEGGGTSSSTTBHHHHHHHHHHHHHHH
T ss_pred             ccccccccccccccccccccchhhhhccccccceeeeeeehheeccccceEEecchhhccCCCCChhHHHHHHHHHHHHH
Confidence            79999999976421          25678999999999998887566799999996434444455689999999998765

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.52  E-value=5e-14  Score=110.04  Aligned_cols=155  Identities=15%  Similarity=0.046  Sum_probs=119.1

Q ss_pred             CCeEEEEcCC-ChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhc--------CCCEEE
Q 023205           56 SEKLLVLGGN-GFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD--------GVTAVI  126 (286)
Q Consensus        56 ~~~VlVtGat-G~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~--------~~d~vi  126 (286)
                      .++|||||++ |.||.+|+++|.+.|+.|++..|+.+.........++...+.|+++++++..+..        ..|.+|
T Consensus         7 ~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld~L~   86 (289)
T KOG1209|consen    7 PKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDGKLDLLY   86 (289)
T ss_pred             CCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCCceEEEE
Confidence            5789999876 9999999999999999999999998886655555689999999999998876653        369999


Q ss_pred             EccccC-CC---------cchhhhhhhHHHHHHHHHHHHc---CCCEEEEEecCCcCCCCccccchHHHHHHHHHHHHH-
Q 023205          127 SCVGGF-GS---------NSYMYKINGTANINAIRAASEK---GVKRFVYISAADFGVANYLLQGYYEGKRAAETELLT-  192 (286)
Q Consensus       127 ~~a~~~-~~---------~~~~~~~~~~~~~~l~~~a~~~---~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~~-  192 (286)
                      +|||.. ..         -...+++|+.|..++.++....   ....||++.|...-.+.+-...|.+||++..++... 
T Consensus        87 NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~~vpfpf~~iYsAsKAAihay~~tL  166 (289)
T KOG1209|consen   87 NNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAGVVPFPFGSIYSASKAAIHAYARTL  166 (289)
T ss_pred             cCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeEEeccchhhhhhHHHHHHHHhhhhc
Confidence            999854 11         1356789999988777776532   123799999964222233345799999999986642 


Q ss_pred             -----hCCCcEEEEeeCeeecCC
Q 023205          193 -----RYPYGGVILRPGFIYGTR  210 (286)
Q Consensus       193 -----~~g~~~~ilRp~~v~g~~  210 (286)
                           .+|++++-+-+|.+-..-
T Consensus       167 rlEl~PFgv~Vin~itGGv~T~I  189 (289)
T KOG1209|consen  167 RLELKPFGVRVINAITGGVATDI  189 (289)
T ss_pred             EEeeeccccEEEEecccceeccc
Confidence                 578999999999885443

>KOG2774 consensus NAD dependent epimerase [General function prediction only]

Probab=99.52  E-value=3.2e-13  Score=107.14  Aligned_cols=212  Identities=15%  Similarity=0.066  Sum_probs=146.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHC-CC-eEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhc--CCCEEEEcccc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDR-GL-TVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD--GVTAVISCVGG  131 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~-g~-~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~--~~d~vi~~a~~  131 (286)
                      ..+|||||+-|.+|..+++.|..+ |. .|+..+-.+..   ....+.-.++..|+.|...+++.+-  .+|.+||..+.
T Consensus        44 ~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp---~~V~~~GPyIy~DILD~K~L~eIVVn~RIdWL~HfSAL  120 (366)
T KOG2774|consen   44 APRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPP---ANVTDVGPYIYLDILDQKSLEEIVVNKRIDWLVHFSAL  120 (366)
T ss_pred             CCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCc---hhhcccCCchhhhhhccccHHHhhcccccceeeeHHHH
Confidence            458999999999999999988876 54 45543332221   1123455678899999999988774  58999998654


Q ss_pred             CC-----CcchhhhhhhHHHHHHHHHHHHcCCCEEEEEecC-CcCCCC-----------ccccchHHHHHHHHHHH---H
Q 023205          132 FG-----SNSYMYKINGTANINAIRAASEKGVKRFVYISAA-DFGVAN-----------YLLQGYYEGKRAAETEL---L  191 (286)
Q Consensus       132 ~~-----~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~-~~~~~~-----------~~~~~y~~sK~~~E~~~---~  191 (286)
                      .+     +-....++|+.|..|+++.|++.+.+ +..-|++ .+|...           .|..-||.||..+|.+=   .
T Consensus       121 LSAvGE~NVpLA~~VNI~GvHNil~vAa~~kL~-iFVPSTIGAFGPtSPRNPTPdltIQRPRTIYGVSKVHAEL~GEy~~  199 (366)
T KOG2774|consen  121 LSAVGETNVPLALQVNIRGVHNILQVAAKHKLK-VFVPSTIGAFGPTSPRNPTPDLTIQRPRTIYGVSKVHAELLGEYFN  199 (366)
T ss_pred             HHHhcccCCceeeeecchhhhHHHHHHHHcCee-EeecccccccCCCCCCCCCCCeeeecCceeechhHHHHHHHHHHHH
Confidence            32     33456789999999999999999884 4444553 344322           24577999999999522   2


Q ss_pred             HhCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCC--CCCCCCCccCCCccHHHHHHHHHHHhcCCC--
Q 023205          192 TRYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLS--QLPLVGPLFTPPVNVTVVAKVAVRAATDPV--  267 (286)
Q Consensus       192 ~~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~g~~~~~~i~v~Dva~~~~~~l~~~~--  267 (286)
                      ..+|+++.++|...++.....+.-..     ......+.. ....+  ..++-.|.....++.+|+-+++++++..+.  
T Consensus       200 hrFg~dfr~~rfPg~is~~~pgggtt-----dya~A~f~~-Al~~gk~tCylrpdtrlpmmy~~dc~~~~~~~~~a~~~~  273 (366)
T KOG2774|consen  200 HRFGVDFRSMRFPGIISATKPGGGTT-----DYAIAIFYD-ALQKGKHTCYLRPDTRLPMMYDTDCMASVIQLLAADSQS  273 (366)
T ss_pred             hhcCccceecccCcccccCCCCCCcc-----hhHHHHHHH-HHHcCCcccccCCCccCceeehHHHHHHHHHHHhCCHHH
Confidence            36899999999988876544332111     111222222 22223  334556778899999999999999987654  


Q ss_pred             CCCCeeEecc
Q 023205          268 FPPGIVDVHG  277 (286)
Q Consensus       268 ~~~~~~~l~~  277 (286)
                      ...++||+++
T Consensus       274 lkrr~ynvt~  283 (366)
T KOG2774|consen  274 LKRRTYNVTG  283 (366)
T ss_pred             hhhheeeece
Confidence            4567999987

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.52  E-value=4.7e-13  Score=111.48  Aligned_cols=186  Identities=16%  Similarity=0.039  Sum_probs=127.7

Q ss_pred             HHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhc----CCCEEEEccccCC--CcchhhhhhhHH
Q 023205           72 ICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD----GVTAVISCVGGFG--SNSYMYKINGTA  145 (286)
Q Consensus        72 l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~----~~d~vi~~a~~~~--~~~~~~~~~~~~  145 (286)
                      ++++|+++|++|++++|+.++.      ...+++++|++|.+++.++++    ++|+||||||...  .....+++|+.+
T Consensus         1 ~a~~l~~~G~~Vv~~~r~~~~~------~~~~~~~~Dl~~~~~v~~~~~~~~~~iD~li~nAG~~~~~~~~~~~~vN~~~   74 (241)
T PRK12428          1 TARLLRFLGARVIGVDRREPGM------TLDGFIQADLGDPASIDAAVAALPGRIDALFNIAGVPGTAPVELVARVNFLG   74 (241)
T ss_pred             ChHHHHhCCCEEEEEeCCcchh------hhhHhhcccCCCHHHHHHHHHHhcCCCeEEEECCCCCCCCCHHHhhhhchHH
Confidence            4788999999999999986542      124678999999999988876    4899999998753  345678999999


Q ss_pred             HHHHHHHHHHc--CCCEEEEEecC-CcCC--------------------------CCccccchHHHHHHHHHHHH-----
Q 023205          146 NINAIRAASEK--GVKRFVYISAA-DFGV--------------------------ANYLLQGYYEGKRAAETELL-----  191 (286)
Q Consensus       146 ~~~l~~~a~~~--~v~~~v~~Ss~-~~~~--------------------------~~~~~~~y~~sK~~~E~~~~-----  191 (286)
                      +..+++++...  .-.+||++||. .++.                          +......|+.+|...+.+.+     
T Consensus        75 ~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~  154 (241)
T PRK12428         75 LRHLTEALLPRMAPGGAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPVALATGYQLSKEALILWTMRQAQP  154 (241)
T ss_pred             HHHHHHHHHHhccCCcEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhccCCCcccHHHHHHHHHHHHHHHHHHH
Confidence            99999988653  22589999994 3321                          22234689999999987553     


Q ss_pred             --HhCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcCCC--
Q 023205          192 --TRYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDPV--  267 (286)
Q Consensus       192 --~~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~~--  267 (286)
                        +..|+++++|+||.+.++......       ....+....  .  ...|.     ..+...+|+|++++.++..+.  
T Consensus       155 e~~~~girvn~v~PG~v~T~~~~~~~-------~~~~~~~~~--~--~~~~~-----~~~~~pe~va~~~~~l~s~~~~~  218 (241)
T PRK12428        155 WFGARGIRVNCVAPGPVFTPILGDFR-------SMLGQERVD--S--DAKRM-----GRPATADEQAAVLVFLCSDAARW  218 (241)
T ss_pred             hhhccCeEEEEeecCCccCcccccch-------hhhhhHhhh--h--ccccc-----CCCCCHHHHHHHHHHHcChhhcC
Confidence              235899999999999876432110       000000000  0  01111     235688999999999886432  


Q ss_pred             CCCCeeEecccc
Q 023205          268 FPPGIVDVHGIL  279 (286)
Q Consensus       268 ~~~~~~~l~~~~  279 (286)
                      ..|+.+.+.|..
T Consensus       219 ~~G~~i~vdgg~  230 (241)
T PRK12428        219 INGVNLPVDGGL  230 (241)
T ss_pred             ccCcEEEecCch
Confidence            346677776654

>PLN00015 protochlorophyllide reductase

Probab=99.51  E-value=4.2e-13  Score=115.84  Aligned_cols=202  Identities=13%  Similarity=0.062  Sum_probs=129.5

Q ss_pred             EEEcCCChhHHHHHHHHHHCC-CeEEEEecCCCcccc---c--ccCCceeEEeccCCCHhHHHHHhc-------CCCEEE
Q 023205           60 LVLGGNGFVGSHICREALDRG-LTVASLSRSGRSSLR---D--SWANNVIWHQGNLLSSDSWKEALD-------GVTAVI  126 (286)
Q Consensus        60 lVtGatG~iG~~l~~~Ll~~g-~~V~~l~R~~~~~~~---~--~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d~vi  126 (286)
                      +||||+++||.+++++|+++| ++|++..|+.++...   +  ....++.++.+|+.|.++++++++       .+|++|
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~lI   80 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVLV   80 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence            699999999999999999999 999999997644211   1  112367889999999998877653       479999


Q ss_pred             EccccCCC-----------cchhhhhhhHHHHHHHHHHH----HcC--CCEEEEEecCCcC------C-C----------
Q 023205          127 SCVGGFGS-----------NSYMYKINGTANINAIRAAS----EKG--VKRFVYISAADFG------V-A----------  172 (286)
Q Consensus       127 ~~a~~~~~-----------~~~~~~~~~~~~~~l~~~a~----~~~--v~~~v~~Ss~~~~------~-~----------  172 (286)
                      ||||....           ....+++|+.++..+++.+.    +.+  ..+||++||....      . .          
T Consensus        81 nnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~~~~  160 (308)
T PLN00015         81 CNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLRG  160 (308)
T ss_pred             ECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccCCCccchhhhhh
Confidence            99986421           12456899999887766653    333  3689999995210      0 0          


Q ss_pred             ------------------CccccchHHHHHHHHHHHH----H--h-CCCcEEEEeeCeeecCCCCCccccCccccCchHH
Q 023205          173 ------------------NYLLQGYYEGKRAAETELL----T--R-YPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPME  227 (286)
Q Consensus       173 ------------------~~~~~~y~~sK~~~E~~~~----~--~-~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~  227 (286)
                                        ..+...|+.||...+...+    +  . .|+.++++.||++......... .      ....
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~~-~------~~~~  233 (308)
T PLN00015        161 LAGGLNGLNSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATTGLFREH-I------PLFR  233 (308)
T ss_pred             hhcccCCccchhhccccCCcHHHHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCccccccc-c------HHHH
Confidence                              0123569999998655432    1  1 4899999999999543221110 0      0001


Q ss_pred             HHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcCCC--CCCCeeEec
Q 023205          228 MVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDPV--FPPGIVDVH  276 (286)
Q Consensus       228 ~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~~--~~~~~~~l~  276 (286)
                      .+.....   ..+.     ..+.++++.|+.++.++..+.  ..|..|...
T Consensus       234 ~~~~~~~---~~~~-----~~~~~pe~~a~~~~~l~~~~~~~~~G~~~~~~  276 (308)
T PLN00015        234 LLFPPFQ---KYIT-----KGYVSEEEAGKRLAQVVSDPSLTKSGVYWSWN  276 (308)
T ss_pred             HHHHHHH---HHHh-----cccccHHHhhhhhhhhccccccCCCccccccC
Confidence            0000000   0111     124688999999999886533  234555543

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=99.51  E-value=3.4e-13  Score=106.60  Aligned_cols=204  Identities=19%  Similarity=0.176  Sum_probs=136.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCccc-----cccc-CCceeEEeccCCCHhHHHHHhcC-------C
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSL-----RDSW-ANNVIWHQGNLLSSDSWKEALDG-------V  122 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~-----~~~~-~~~~~~i~~Dl~d~~~~~~~~~~-------~  122 (286)
                      .+++++||+.|.||..+.++|+++|..+.++..+.++..     +... ...+.|+++|+++..+++++|+.       +
T Consensus         5 GKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~fg~i   84 (261)
T KOG4169|consen    5 GKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILATFGTI   84 (261)
T ss_pred             CceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHHhCce
Confidence            679999999999999999999999987777776655421     1222 34789999999999998888763       6


Q ss_pred             CEEEEccccCCC--cchhhhhhhHHHHHHHHHH----HH-cC--CCEEEEEecCCcCCCCccccchHHHHHHHHH-----
Q 023205          123 TAVISCVGGFGS--NSYMYKINGTANINAIRAA----SE-KG--VKRFVYISAADFGVANYLLQGYYEGKRAAET-----  188 (286)
Q Consensus       123 d~vi~~a~~~~~--~~~~~~~~~~~~~~l~~~a----~~-~~--v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~-----  188 (286)
                      |++|++||..++  .+....+|..|..|-...+    .+ .|  -.-+|.+||...-.+-+....|+++|+-.-.     
T Consensus        85 DIlINgAGi~~dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~P~p~~pVY~AsKaGVvgFTRSl  164 (261)
T KOG4169|consen   85 DILINGAGILDDKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLDPMPVFPVYAASKAGVVGFTRSL  164 (261)
T ss_pred             EEEEcccccccchhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccCccccchhhhhcccceeeeehhh
Confidence            999999999864  3567778887766544443    32 22  2368899995322334445679999984432     


Q ss_pred             ---HHHHhCCCcEEEEeeCeeecCCCC-----CccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHH
Q 023205          189 ---ELLTRYPYGGVILRPGFIYGTRTV-----GGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAV  260 (286)
Q Consensus       189 ---~~~~~~g~~~~ilRp~~v~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~  260 (286)
                         .-..+.|+++..+.||.+--.-..     +.++.       .-+.+....+           ...-.+..+++..++
T Consensus       165 a~~ayy~~sGV~~~avCPG~t~t~l~~~~~~~~~~~e-------~~~~~~~~l~-----------~~~~q~~~~~a~~~v  226 (261)
T KOG4169|consen  165 ADLAYYQRSGVRFNAVCPGFTRTDLAENIDASGGYLE-------YSDSIKEALE-----------RAPKQSPACCAINIV  226 (261)
T ss_pred             hhhhhHhhcCEEEEEECCCcchHHHHHHHHhcCCccc-------ccHHHHHHHH-----------HcccCCHHHHHHHHH
Confidence               223468999999999987422110     00000       0011111111           122357789999999


Q ss_pred             HHhcCCCCCCCeeEeccc
Q 023205          261 RAATDPVFPPGIVDVHGI  278 (286)
Q Consensus       261 ~~l~~~~~~~~~~~l~~~  278 (286)
                      .+++.++. |.+|.+...
T Consensus       227 ~aiE~~~N-Gaiw~v~~g  243 (261)
T KOG4169|consen  227 NAIEYPKN-GAIWKVDSG  243 (261)
T ss_pred             HHHhhccC-CcEEEEecC
Confidence            99998653 677777654

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=99.50  E-value=6.6e-13  Score=110.26  Aligned_cols=151  Identities=21%  Similarity=0.206  Sum_probs=117.3

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcc--ccccc-CCceeEEeccCCCHhHHHHHhc---------CC
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSS--LRDSW-ANNVIWHQGNLLSSDSWKEALD---------GV  122 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~--~~~~~-~~~~~~i~~Dl~d~~~~~~~~~---------~~  122 (286)
                      ..+.|+|||+-...|..++++|.++|+.|++-...++..  ..... .++...++.|++++++++++.+         +.
T Consensus        28 ~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~~~gL  107 (322)
T KOG1610|consen   28 SDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHLGEDGL  107 (322)
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhcccccc
Confidence            356899999999999999999999999999988665542  12222 6789999999999999998875         45


Q ss_pred             CEEEEccccCC-----------CcchhhhhhhHHHHHHHHHH----HHcCCCEEEEEecCCcCCCCccccchHHHHHHHH
Q 023205          123 TAVISCVGGFG-----------SNSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKRAAE  187 (286)
Q Consensus       123 d~vi~~a~~~~-----------~~~~~~~~~~~~~~~l~~~a----~~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E  187 (286)
                      -.||||||...           +.....++|..|+..+.++.    +++. .|+|++||.......+...+|..||...|
T Consensus       108 wglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~ar-GRvVnvsS~~GR~~~p~~g~Y~~SK~aVe  186 (322)
T KOG1610|consen  108 WGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRAR-GRVVNVSSVLGRVALPALGPYCVSKFAVE  186 (322)
T ss_pred             eeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhcc-CeEEEecccccCccCcccccchhhHHHHH
Confidence            79999999542           12356689999987665544    4443 49999999754455556788999999999


Q ss_pred             HHHH------HhCCCcEEEEeeCee
Q 023205          188 TELL------TRYPYGGVILRPGFI  206 (286)
Q Consensus       188 ~~~~------~~~g~~~~ilRp~~v  206 (286)
                      ...-      ..+|+++.++-||.+
T Consensus       187 af~D~lR~EL~~fGV~VsiiePG~f  211 (322)
T KOG1610|consen  187 AFSDSLRRELRPFGVKVSIIEPGFF  211 (322)
T ss_pred             HHHHHHHHHHHhcCcEEEEeccCcc
Confidence            8552      268999999999954

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=99.50  E-value=2.4e-12  Score=101.81  Aligned_cols=189  Identities=17%  Similarity=0.157  Sum_probs=128.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHC-CCeEEE-EecCCCcccc-----cccCCceeEEeccCCCHhHHHHHhc--------
Q 023205           56 SEKLLVLGGNGFVGSHICREALDR-GLTVAS-LSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD--------  120 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~-g~~V~~-l~R~~~~~~~-----~~~~~~~~~i~~Dl~d~~~~~~~~~--------  120 (286)
                      ++.|+||||+..||--|+++|++. |.++++ ..|++++...     ....+++++++.|+++.+++.++++        
T Consensus         3 pksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~iVg~   82 (249)
T KOG1611|consen    3 PKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKIVGS   82 (249)
T ss_pred             CccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHhhccc
Confidence            356999999999999999999987 455554 4454655322     1125799999999998887776653        


Q ss_pred             -CCCEEEEccccCCC-----------cchhhhhhhHHHHHHHHHH----HHcCCC-----------EEEEEecCC---cC
Q 023205          121 -GVTAVISCVGGFGS-----------NSYMYKINGTANINAIRAA----SEKGVK-----------RFVYISAAD---FG  170 (286)
Q Consensus       121 -~~d~vi~~a~~~~~-----------~~~~~~~~~~~~~~l~~~a----~~~~v~-----------~~v~~Ss~~---~~  170 (286)
                       |.+++++|||....           ....+++|..++..+.|.+    +++..+           .+|++||..   -+
T Consensus        83 ~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~s~~~  162 (249)
T KOG1611|consen   83 DGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAGSIGG  162 (249)
T ss_pred             CCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeeccccccCC
Confidence             57999999996521           1256788888876554443    333222           699999842   23


Q ss_pred             CCCccccchHHHHHHHHHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCC
Q 023205          171 VANYLLQGYYEGKRAAETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGP  244 (286)
Q Consensus       171 ~~~~~~~~y~~sK~~~E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  244 (286)
                      ....+...|.+||.+.-...+.      ..++=++.+.||||--+...                                
T Consensus       163 ~~~~~~~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV~TDMgg--------------------------------  210 (249)
T KOG1611|consen  163 FRPGGLSAYRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWVQTDMGG--------------------------------  210 (249)
T ss_pred             CCCcchhhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeEEcCCCC--------------------------------
Confidence            3455678899999998876654      45677888999999644321                                


Q ss_pred             ccCCCccHHHHHHHHHHHhc--CCCCCCCeeEecc
Q 023205          245 LFTPPVNVTVVAKVAVRAAT--DPVFPPGIVDVHG  277 (286)
Q Consensus       245 ~~~~~i~v~Dva~~~~~~l~--~~~~~~~~~~l~~  277 (286)
                       .-..+++++-+.-++..+.  +++..|+.|+-.+
T Consensus       211 -~~a~ltveeSts~l~~~i~kL~~~hnG~ffn~dl  244 (249)
T KOG1611|consen  211 -KKAALTVEESTSKLLASINKLKNEHNGGFFNRDG  244 (249)
T ss_pred             -CCcccchhhhHHHHHHHHHhcCcccCcceEccCC
Confidence             1123566666666666664  3455566666543

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=99.48  E-value=1.7e-12  Score=108.60  Aligned_cols=151  Identities=19%  Similarity=0.142  Sum_probs=111.3

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcc----cccccC----CceeEEeccCCC-HhHHHHHhc-----
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSS----LRDSWA----NNVIWHQGNLLS-SDSWKEALD-----  120 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~----~~~~~~----~~~~~i~~Dl~d-~~~~~~~~~-----  120 (286)
                      .+++|+||||++.||..+++.|+++|++|+++.|+....    ......    ..+.+...|+++ .++++.+++     
T Consensus         4 ~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~~~   83 (251)
T COG1028           4 SGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAAEEE   83 (251)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHHHHH
Confidence            467899999999999999999999999999888886541    111112    367788899998 877765553     


Q ss_pred             --CCCEEEEccccCCC-----------cchhhhhhhHHHHHHHHHHHHcCCC--EEEEEecCCcCCCCcc-ccchHHHHH
Q 023205          121 --GVTAVISCVGGFGS-----------NSYMYKINGTANINAIRAASEKGVK--RFVYISAADFGVANYL-LQGYYEGKR  184 (286)
Q Consensus       121 --~~d~vi~~a~~~~~-----------~~~~~~~~~~~~~~l~~~a~~~~v~--~~v~~Ss~~~~~~~~~-~~~y~~sK~  184 (286)
                        ++|+++||||....           ....+++|+.+...+.+.+.. ..+  +||++||.... .... ...|+.+|.
T Consensus        84 ~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~-~~~~~~Iv~isS~~~~-~~~~~~~~Y~~sK~  161 (251)
T COG1028          84 FGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALP-LMKKQRIVNISSVAGL-GGPPGQAAYAASKA  161 (251)
T ss_pred             cCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHH-hhhhCeEEEECCchhc-CCCCCcchHHHHHH
Confidence              48999999997431           135568888888877773332 222  89999996544 4344 378999999


Q ss_pred             HHHHHHHH------hCCCcEEEEeeCeee
Q 023205          185 AAETELLT------RYPYGGVILRPGFIY  207 (286)
Q Consensus       185 ~~E~~~~~------~~g~~~~ilRp~~v~  207 (286)
                      ..+.+...      ..|++++.+.||.+-
T Consensus       162 al~~~~~~l~~e~~~~gi~v~~v~PG~~~  190 (251)
T COG1028         162 ALIGLTKALALELAPRGIRVNAVAPGYID  190 (251)
T ss_pred             HHHHHHHHHHHHHhhhCcEEEEEEeccCC
Confidence            99875542      468999999999554

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.47  E-value=2.3e-12  Score=110.20  Aligned_cols=156  Identities=17%  Similarity=0.085  Sum_probs=115.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc-------cccCCceeEEeccCCCHhHHHHHhc-------C
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-------DSWANNVIWHQGNLLSSDSWKEALD-------G  121 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~-------~  121 (286)
                      .++++|||||..||.+++++|..+|.+|+...|+..+...       +.....+.++++|+++.+++.+..+       .
T Consensus        35 ~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~~~~~  114 (314)
T KOG1208|consen   35 GKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKKKEGP  114 (314)
T ss_pred             CcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHhcCCC
Confidence            4789999999999999999999999999999999744211       1224578889999999988876653       4


Q ss_pred             CCEEEEccccCCCc--------chhhhhhhHHHHHHH----HHHHHcCCCEEEEEecCCcCC------CCc-------cc
Q 023205          122 VTAVISCVGGFGSN--------SYMYKINGTANINAI----RAASEKGVKRFVYISAADFGV------ANY-------LL  176 (286)
Q Consensus       122 ~d~vi~~a~~~~~~--------~~~~~~~~~~~~~l~----~~a~~~~v~~~v~~Ss~~~~~------~~~-------~~  176 (286)
                      .|++|+|||.+..+        +..+.+|..|...+.    ..++.....|||++||..++.      ...       ..
T Consensus       115 ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~~~~~~~~~l~~~~~~~~~~~  194 (314)
T KOG1208|consen  115 LDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILGGGKIDLKDLSGEKAKLYSSD  194 (314)
T ss_pred             ccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccccCccchhhccchhccCccch
Confidence            69999999986432        356688988877554    445555557999999964311      001       11


Q ss_pred             cchHHHHHHHHHHHHH-----hCCCcEEEEeeCeeecCCC
Q 023205          177 QGYYEGKRAAETELLT-----RYPYGGVILRPGFIYGTRT  211 (286)
Q Consensus       177 ~~y~~sK~~~E~~~~~-----~~g~~~~ilRp~~v~g~~~  211 (286)
                      ..|+.||........+     ..|+.++.+-||.+..+..
T Consensus       195 ~~Y~~SKla~~l~~~eL~k~l~~~V~~~~~hPG~v~t~~l  234 (314)
T KOG1208|consen  195 AAYALSKLANVLLANELAKRLKKGVTTYSVHPGVVKTTGL  234 (314)
T ss_pred             hHHHHhHHHHHHHHHHHHHHhhcCceEEEECCCcccccce
Confidence            2399999987765543     2389999999999987643

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.45  E-value=3.8e-12  Score=101.19  Aligned_cols=146  Identities=20%  Similarity=0.218  Sum_probs=105.5

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCC-CeEEEEecCCC-ccc-c------cccCCceeEEeccCCCHhHHHHHhcC-------
Q 023205           58 KLLVLGGNGFVGSHICREALDRG-LTVASLSRSGR-SSL-R------DSWANNVIWHQGNLLSSDSWKEALDG-------  121 (286)
Q Consensus        58 ~VlVtGatG~iG~~l~~~Ll~~g-~~V~~l~R~~~-~~~-~------~~~~~~~~~i~~Dl~d~~~~~~~~~~-------  121 (286)
                      +++|||++|.+|..+++.|.+++ .+|+++.|+.. ... .      +.....+.++.+|++|++++.++++.       
T Consensus         2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~~   81 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRFGP   81 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTSS-
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhccCC
Confidence            68999999999999999999997 48999999832 211 1      11245789999999999999998854       


Q ss_pred             CCEEEEccccCCCc----------chhhhhhhHHHHHHHHHHHHcCCCEEEEEecCC--cCCCCccccchHHHHHHHHHH
Q 023205          122 VTAVISCVGGFGSN----------SYMYKINGTANINAIRAASEKGVKRFVYISAAD--FGVANYLLQGYYEGKRAAETE  189 (286)
Q Consensus       122 ~d~vi~~a~~~~~~----------~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~~--~~~~~~~~~~y~~sK~~~E~~  189 (286)
                      ++.|||+++...+.          ...+.+.+.+..++.++.....++.||+.||..  +|..  ....|.......+.+
T Consensus        82 i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~~l~~~i~~SSis~~~G~~--gq~~YaaAN~~lda~  159 (181)
T PF08659_consen   82 IDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENRPLDFFILFSSISSLLGGP--GQSAYAAANAFLDAL  159 (181)
T ss_dssp             EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTTTTSEEEEEEEHHHHTT-T--TBHHHHHHHHHHHHH
T ss_pred             cceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcCCCCeEEEECChhHhccCc--chHhHHHHHHHHHHH
Confidence            58999999876321          244577888999999999888899999999953  3433  456799999888887


Q ss_pred             HHH--hCCCcEEEEeeCe
Q 023205          190 LLT--RYPYGGVILRPGF  205 (286)
Q Consensus       190 ~~~--~~g~~~~ilRp~~  205 (286)
                      ...  ..|.++..|.-+.
T Consensus       160 a~~~~~~g~~~~sI~wg~  177 (181)
T PF08659_consen  160 ARQRRSRGLPAVSINWGA  177 (181)
T ss_dssp             HHHHHHTTSEEEEEEE-E
T ss_pred             HHHHHhCCCCEEEEEccc
Confidence            654  5788888887654

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.43  E-value=4.2e-11  Score=102.47  Aligned_cols=213  Identities=10%  Similarity=-0.003  Sum_probs=128.8

Q ss_pred             CCCeEEEEcCC--ChhHHHHHHHHHHCCCeEEEEecCC---------Ccccc--c---ccCC-----ceeEEeccCCCHh
Q 023205           55 PSEKLLVLGGN--GFVGSHICREALDRGLTVASLSRSG---------RSSLR--D---SWAN-----NVIWHQGNLLSSD  113 (286)
Q Consensus        55 ~~~~VlVtGat--G~iG~~l~~~Ll~~g~~V~~l~R~~---------~~~~~--~---~~~~-----~~~~i~~Dl~d~~  113 (286)
                      +.|+++|||++  ..||+++++.|.++|++|++.+|.+         .....  .   ....     ++..+..|+.+.+
T Consensus         7 ~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~~~   86 (299)
T PRK06300          7 TGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVPIYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDASFDTPE   86 (299)
T ss_pred             CCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEeccchhhhhhhhcccccccccccccccchhhhhhHHHhhhhcCCCE
Confidence            46789999995  8999999999999999999976531         10000  0   0000     0111223333332


Q ss_pred             ------------------HHHHHh-------cCCCEEEEccccCC------------CcchhhhhhhHHHHHHHHHHHHc
Q 023205          114 ------------------SWKEAL-------DGVTAVISCVGGFG------------SNSYMYKINGTANINAIRAASEK  156 (286)
Q Consensus       114 ------------------~~~~~~-------~~~d~vi~~a~~~~------------~~~~~~~~~~~~~~~l~~~a~~~  156 (286)
                                        ++++++       ..+|++|||||...            .....+++|+.+..++++++...
T Consensus        87 ~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~a~~p~  166 (299)
T PRK06300         87 DVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSHFGPI  166 (299)
T ss_pred             EeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence                              233333       35899999997421            11355689999999888887653


Q ss_pred             C--CCEEEEEecCCcCCCCccc-cchHHHHHHHHHHHHH------h-CCCcEEEEeeCeeecCCCCCccccCccccCchH
Q 023205          157 G--VKRFVYISAADFGVANYLL-QGYYEGKRAAETELLT------R-YPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPM  226 (286)
Q Consensus       157 ~--v~~~v~~Ss~~~~~~~~~~-~~y~~sK~~~E~~~~~------~-~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~  226 (286)
                      -  -.++|++||.......+.. ..|+.+|...+.+.+.      . .|++++.|.||.+-.+.....        ....
T Consensus       167 m~~~G~ii~iss~~~~~~~p~~~~~Y~asKaAl~~lt~~la~el~~~~gIrVn~V~PG~v~T~~~~~~--------~~~~  238 (299)
T PRK06300        167 MNPGGSTISLTYLASMRAVPGYGGGMSSAKAALESDTKVLAWEAGRRWGIRVNTISAGPLASRAGKAI--------GFIE  238 (299)
T ss_pred             hhcCCeEEEEeehhhcCcCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeCCccChhhhcc--------cccH
Confidence            1  2478988884221111222 2699999999886642      2 489999999999865432100        0000


Q ss_pred             HHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcCC--CCCCCeeEecccccccc
Q 023205          227 EMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDP--VFPPGIVDVHGILRYSQ  283 (286)
Q Consensus       227 ~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~--~~~~~~~~l~~~~~~s~  283 (286)
                      + ......  ...|.     ..+...+|+|+++..++..+  ...++++.+.|...+..
T Consensus       239 ~-~~~~~~--~~~p~-----~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG~~~~~  289 (299)
T PRK06300        239 R-MVDYYQ--DWAPL-----PEPMEAEQVGAAAAFLVSPLASAITGETLYVDHGANVMG  289 (299)
T ss_pred             H-HHHHHH--hcCCC-----CCCcCHHHHHHHHHHHhCccccCCCCCEEEECCCcceec
Confidence            1 111111  01121     23468899999999988653  34578888887765543

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.41  E-value=9.1e-13  Score=99.85  Aligned_cols=208  Identities=16%  Similarity=0.106  Sum_probs=146.3

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc--cccCCceeEEeccCCCHhHHHHHhcC---CCEEEEcc
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSWANNVIWHQGNLLSSDSWKEALDG---VTAVISCV  129 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~--~~~~~~~~~i~~Dl~d~~~~~~~~~~---~d~vi~~a  129 (286)
                      ..+.|++||+.-.||+.+++.|.+.|.+|+++.|++.....  ...+.-+..+.+|+.+-+.+.+.+..   +|.++++|
T Consensus         6 aG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~p~~I~Pi~~Dls~wea~~~~l~~v~pidgLVNNA   85 (245)
T KOG1207|consen    6 AGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKETPSLIIPIVGDLSAWEALFKLLVPVFPIDGLVNNA   85 (245)
T ss_pred             cceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhCCcceeeeEecccHHHHHHHhhcccCchhhhhccc
Confidence            46789999999999999999999999999999999866332  11233488999999998888877764   69999999


Q ss_pred             ccCC----------CcchhhhhhhHHHHHHHHHHHHc----CC-CEEEEEecCCcCCCCccccchHHHHHHHHHHHH---
Q 023205          130 GGFG----------SNSYMYKINGTANINAIRAASEK----GV-KRFVYISAADFGVANYLLQGYYEGKRAAETELL---  191 (286)
Q Consensus       130 ~~~~----------~~~~~~~~~~~~~~~l~~~a~~~----~v-~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~---  191 (286)
                      |..-          ..+..|++|+.+..++.+...+.    ++ ..+|.+||.....+-.....|..+|.+.+.+-+   
T Consensus        86 gvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas~R~~~nHtvYcatKaALDmlTk~lA  165 (245)
T KOG1207|consen   86 GVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQASIRPLDNHTVYCATKAALDMLTKCLA  165 (245)
T ss_pred             hhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhcccccCCceEEeecHHHHHHHHHHHH
Confidence            8642          23466789999888888775442    32 369999995333333445689999998876443   


Q ss_pred             -H--hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcCCC-
Q 023205          192 -T--RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDPV-  267 (286)
Q Consensus       192 -~--~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~~-  267 (286)
                       +  ...++++.+.|..++.......|--|..           ...-...+|+     ..|.-++.+..++..++.... 
T Consensus       166 lELGp~kIRVNsVNPTVVmT~MG~dnWSDP~K-----------~k~mL~riPl-----~rFaEV~eVVnA~lfLLSd~ss  229 (245)
T KOG1207|consen  166 LELGPQKIRVNSVNPTVVMTDMGRDNWSDPDK-----------KKKMLDRIPL-----KRFAEVDEVVNAVLFLLSDNSS  229 (245)
T ss_pred             HhhCcceeEeeccCCeEEEecccccccCCchh-----------ccchhhhCch-----hhhhHHHHHHhhheeeeecCcC
Confidence             2  3469999999999987665444322210           0011112332     347889999999999887654 


Q ss_pred             -CCCCeeEeccc
Q 023205          268 -FPPGIVDVHGI  278 (286)
Q Consensus       268 -~~~~~~~l~~~  278 (286)
                       ..|..+-+.|+
T Consensus       230 mttGstlpveGG  241 (245)
T KOG1207|consen  230 MTTGSTLPVEGG  241 (245)
T ss_pred             cccCceeeecCC
Confidence             34555555554

>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]

Probab=99.41  E-value=6.8e-12  Score=100.39  Aligned_cols=214  Identities=14%  Similarity=0.116  Sum_probs=140.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCccc-----------ccccCCceeEEeccCCCHhHHHHHhcC--C
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSL-----------RDSWANNVIWHQGNLLSSDSWKEALDG--V  122 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~-----------~~~~~~~~~~i~~Dl~d~~~~~~~~~~--~  122 (286)
                      ++..||||-||+=|++|++.|+.+||+|.++.|+.+.-.           .........+..+|++|...+.+++..  .
T Consensus        28 rkvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~ikP  107 (376)
T KOG1372|consen   28 RKVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTIKP  107 (376)
T ss_pred             ceEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhccCc
Confidence            456799999999999999999999999999999876521           111235788999999999999999875  4


Q ss_pred             CEEEEccccCC------CcchhhhhhhHHHHHHHHHHHHcCCC---EEEEEecC-CcCCC----------CccccchHHH
Q 023205          123 TAVISCVGGFG------SNSYMYKINGTANINAIRAASEKGVK---RFVYISAA-DFGVA----------NYLLQGYYEG  182 (286)
Q Consensus       123 d~vi~~a~~~~------~~~~~~~~~~~~~~~l~~~a~~~~v~---~~v~~Ss~-~~~~~----------~~~~~~y~~s  182 (286)
                      +-|+|+|+..+      -+...-++...|++.++++.+..+..   +|.-.|++ -||..          -+|.++|+++
T Consensus       108 tEiYnLaAQSHVkvSFdlpeYTAeVdavGtLRlLdAi~~c~l~~~VrfYQAstSElyGkv~e~PQsE~TPFyPRSPYa~a  187 (376)
T KOG1372|consen  108 TEVYNLAAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIRACRLTEKVRFYQASTSELYGKVQEIPQSETTPFYPRSPYAAA  187 (376)
T ss_pred             hhhhhhhhhcceEEEeecccceeeccchhhhhHHHHHHhcCcccceeEEecccHhhcccccCCCcccCCCCCCCChhHHh
Confidence            89999998653      23445578889999999999876532   67777764 45532          2457889998


Q ss_pred             HHHHHHHH---HHhCCCcEEEEeeCeeecCCCCCccccCccccCchHH-HHHHh-----cccCCCCCCCCC--ccCCCcc
Q 023205          183 KRAAETEL---LTRYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPME-MVLQH-----AKPLSQLPLVGP--LFTPPVN  251 (286)
Q Consensus       183 K~~~E~~~---~~~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~-~~~~~-----~~~~~~~~~~g~--~~~~~i~  251 (286)
                      |..+--++   ++..++   ...-|.+|.......   .    .+++. .+.+.     ......+.+ |+  ..++|-|
T Consensus       188 Kmy~~WivvNyREAYnm---fAcNGILFNHESPRR---G----enFVTRKItRsvakI~~gqqe~~~L-GNL~a~RDWGh  256 (376)
T KOG1372|consen  188 KMYGYWIVVNYREAYNM---FACNGILFNHESPRR---G----ENFVTRKITRSVAKISLGQQEKIEL-GNLSALRDWGH  256 (376)
T ss_pred             hhhheEEEEEhHHhhcc---eeeccEeecCCCCcc---c----cchhhHHHHHHHHHhhhcceeeEEe-cchhhhcccch
Confidence            87654322   233331   112244443221100   0    11211 12221     111222322 33  3789999


Q ss_pred             HHHHHHHHHHHhcCCCCCCCeeEeccccccc
Q 023205          252 VTVVAKVAVRAATDPVFPPGIVDVHGILRYS  282 (286)
Q Consensus       252 v~Dva~~~~~~l~~~~~~~~~~~l~~~~~~s  282 (286)
                      ..|-.++++..|+.++  +..|-|..++..|
T Consensus       257 A~dYVEAMW~mLQ~d~--PdDfViATge~hs  285 (376)
T KOG1372|consen  257 AGDYVEAMWLMLQQDS--PDDFVIATGEQHS  285 (376)
T ss_pred             hHHHHHHHHHHHhcCC--CCceEEecCCccc
Confidence            9999999999998876  5566666655443

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.34  E-value=3.4e-11  Score=99.98  Aligned_cols=192  Identities=17%  Similarity=0.196  Sum_probs=130.4

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCccccc-------ccCCceeEEeccCCCHhHHHHHhcC-------C
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRD-------SWANNVIWHQGNLLSSDSWKEALDG-------V  122 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~-------~~~~~~~~i~~Dl~d~~~~~~~~~~-------~  122 (286)
                      .+|+|||++..+|..++.++..+|++|+++.|+.++..+.       ..-..+.+.-+|+.|.+.+..++++       +
T Consensus        34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~~~  113 (331)
T KOG1210|consen   34 RHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEGPI  113 (331)
T ss_pred             ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhccCCc
Confidence            6899999999999999999999999999999997763221       1112366888999999888877764       5


Q ss_pred             CEEEEccccCC-----C-----cchhhhhhhHHHHHHHHHHHHcC-----CCEEEEEecCCcCCCCccccchHHHHHHHH
Q 023205          123 TAVISCVGGFG-----S-----NSYMYKINGTANINAIRAASEKG-----VKRFVYISAADFGVANYLLQGYYEGKRAAE  187 (286)
Q Consensus       123 d~vi~~a~~~~-----~-----~~~~~~~~~~~~~~l~~~a~~~~-----v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E  187 (286)
                      |.+|+|||..-     .     -+..+++|..++.|++.++..+.     ..+|+++||...-..-.....|..+|...-
T Consensus       114 d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~~~i~GysaYs~sK~alr  193 (331)
T KOG1210|consen  114 DNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAMLGIYGYSAYSPSKFALR  193 (331)
T ss_pred             ceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhhcCcccccccccHHHHHH
Confidence            99999999642     1     13567899999999988775431     238999998421111123345777777555


Q ss_pred             HHHH----H--hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHH
Q 023205          188 TELL----T--RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVR  261 (286)
Q Consensus       188 ~~~~----~--~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~  261 (286)
                      .+..    +  ..++.++..-|+.+..|+-....                ..++.  ....=++..+.+..+++|.+++.
T Consensus       194 gLa~~l~qE~i~~~v~Vt~~~P~~~~tpGfE~En----------------~tkP~--~t~ii~g~ss~~~~e~~a~~~~~  255 (331)
T KOG1210|consen  194 GLAEALRQELIKYGVHVTLYYPPDTLTPGFEREN----------------KTKPE--ETKIIEGGSSVIKCEEMAKAIVK  255 (331)
T ss_pred             HHHHHHHHHHhhcceEEEEEcCCCCCCCcccccc----------------ccCch--heeeecCCCCCcCHHHHHHHHHh
Confidence            4332    2  46899999998888766432110                00100  11001233455899999999988


Q ss_pred             HhcCC
Q 023205          262 AATDP  266 (286)
Q Consensus       262 ~l~~~  266 (286)
                      =+...
T Consensus       256 ~~~rg  260 (331)
T KOG1210|consen  256 GMKRG  260 (331)
T ss_pred             HHhhc
Confidence            77653

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=99.32  E-value=3.7e-11  Score=93.75  Aligned_cols=154  Identities=17%  Similarity=0.123  Sum_probs=111.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc-cccCCceeEEeccCCCHhHHHHHhc-------CCCEEEE
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-DSWANNVIWHQGNLLSSDSWKEALD-------GVTAVIS  127 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~-~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d~vi~  127 (286)
                      ..+||||||+.+||..++++|++.|.+|++..|+...... ....+.+....+|+.|.++.++.++       ..+++|+
T Consensus         5 gnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~lNvliN   84 (245)
T COG3967           5 GNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYPNLNVLIN   84 (245)
T ss_pred             CcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCCchheeee
Confidence            5689999999999999999999999999999999766322 2234678888999999886665553       3699999


Q ss_pred             ccccCCC------------cchhhhhhhHHHHHHHHHHHH----cCCCEEEEEecCCcCCCCccccchHHHHHHHHHHHH
Q 023205          128 CVGGFGS------------NSYMYKINGTANINAIRAASE----KGVKRFVYISAADFGVANYLLQGYYEGKRAAETELL  191 (286)
Q Consensus       128 ~a~~~~~------------~~~~~~~~~~~~~~l~~~a~~----~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~  191 (286)
                      |||....            ......+|..++..+..+.-.    ..-..+|.+||.-.-.+......|..+|...+-+-.
T Consensus        85 NAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSSGLafvPm~~~PvYcaTKAaiHsyt~  164 (245)
T COG3967          85 NAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSSGLAFVPMASTPVYCATKAAIHSYTL  164 (245)
T ss_pred             cccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEeccccccCcccccccchhhHHHHHHHHH
Confidence            9997521            123456788888877666543    334479999993222223334469999998886442


Q ss_pred             ------HhCCCcEEEEeeCeeecC
Q 023205          192 ------TRYPYGGVILRPGFIYGT  209 (286)
Q Consensus       192 ------~~~g~~~~ilRp~~v~g~  209 (286)
                            +..++++.=+-|+.|-.+
T Consensus       165 aLR~Qlk~t~veVIE~~PP~V~t~  188 (245)
T COG3967         165 ALREQLKDTSVEVIELAPPLVDTT  188 (245)
T ss_pred             HHHHHhhhcceEEEEecCCceecC
Confidence                  245788888888888654

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=99.30  E-value=6.2e-11  Score=124.15  Aligned_cols=155  Identities=15%  Similarity=0.097  Sum_probs=117.3

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHC-CCeEEEEecCCCcc----------------------------------------
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDR-GLTVASLSRSGRSS----------------------------------------   93 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~-g~~V~~l~R~~~~~----------------------------------------   93 (286)
                      ..+++|||||++.||..++++|+++ |.+|+++.|+....                                        
T Consensus      1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~ 2075 (2582)
T TIGR02813      1996 SDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRP 2075 (2582)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccc
Confidence            4679999999999999999999998 58999999982100                                        


Q ss_pred             ----------cc--cccCCceeEEeccCCCHhHHHHHhc------CCCEEEEccccCCC----------cchhhhhhhHH
Q 023205           94 ----------LR--DSWANNVIWHQGNLLSSDSWKEALD------GVTAVISCVGGFGS----------NSYMYKINGTA  145 (286)
Q Consensus        94 ----------~~--~~~~~~~~~i~~Dl~d~~~~~~~~~------~~d~vi~~a~~~~~----------~~~~~~~~~~~  145 (286)
                                ..  ......+.++.+|++|.+.+.++++      ++|+|||+||...+          ....+++|+.|
T Consensus      2076 ~~~~~ei~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~nv~G 2155 (2582)
T TIGR02813      2076 VLSSLEIAQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKTLQITGIIHGAGVLADKHIQDKTLEEFNAVYGTKVDG 2155 (2582)
T ss_pred             cchhHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHHHH
Confidence                      00  0012357889999999998887764      47999999997532          23567999999


Q ss_pred             HHHHHHHHHHcCCCEEEEEecCCcCCCCccccchHHHHHHHHHHHHH----hCCCcEEEEeeCeeecC
Q 023205          146 NINAIRAASEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLT----RYPYGGVILRPGFIYGT  209 (286)
Q Consensus       146 ~~~l~~~a~~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~~----~~g~~~~ilRp~~v~g~  209 (286)
                      ..++++++.....++||++||...-........|+.+|...+.+.+.    ..+++++.+.+|.+-++
T Consensus      2156 ~~~Ll~al~~~~~~~IV~~SSvag~~G~~gqs~YaaAkaaL~~la~~la~~~~~irV~sI~wG~wdtg 2223 (2582)
T TIGR02813      2156 LLSLLAALNAENIKLLALFSSAAGFYGNTGQSDYAMSNDILNKAALQLKALNPSAKVMSFNWGPWDGG 2223 (2582)
T ss_pred             HHHHHHHHHHhCCCeEEEEechhhcCCCCCcHHHHHHHHHHHHHHHHHHHHcCCcEEEEEECCeecCC
Confidence            99999999887778999999953212223456799999888775543    34688999999887553

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>PRK08309 short chain dehydrogenase; Provisional

Probab=99.23  E-value=5.4e-10  Score=88.13  Aligned_cols=151  Identities=13%  Similarity=0.124  Sum_probs=107.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc--c-c-cCCceeEEeccCCCHhHHHHHhcC-------CCEE
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--D-S-WANNVIWHQGNLLSSDSWKEALDG-------VTAV  125 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~--~-~-~~~~~~~i~~Dl~d~~~~~~~~~~-------~d~v  125 (286)
                      |+++||||||++|. +++.|.++|++|++++|++++...  . . ....+.++.+|+.|++++.+++++       +|.+
T Consensus         1 m~vlVtGGtG~gg~-la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id~l   79 (177)
T PRK08309          1 MHALVIGGTGMLKR-VSLWLCEKGFHVSVIARREVKLENVKRESTTPESITPLPLDYHDDDALKLAIKSTIEKNGPFDLA   79 (177)
T ss_pred             CEEEEECcCHHHHH-HHHHHHHCcCEEEEEECCHHHHHHHHHHhhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCeEE
Confidence            47999999998876 999999999999999998644211  0 1 124688899999999998887764       4555


Q ss_pred             EEccccCCCcchhhhhhhHHHHHHHHHHHHcCCC----EEEEEecCCcCCCCccccchHHHHHHHHHHHHHhCCCcEEEE
Q 023205          126 ISCVGGFGSNSYMYKINGTANINAIRAASEKGVK----RFVYISAADFGVANYLLQGYYEGKRAAETELLTRYPYGGVIL  201 (286)
Q Consensus       126 i~~a~~~~~~~~~~~~~~~~~~~l~~~a~~~~v~----~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~~~~g~~~~il  201 (286)
                      |+.            +...++.++..+|++.+++    +|+++=.+...+   +       +...+...  .....|-=|
T Consensus        80 v~~------------vh~~~~~~~~~~~~~~gv~~~~~~~~h~~gs~~~~---~-------~~~~~~~~--~~~~~~~~i  135 (177)
T PRK08309         80 VAW------------IHSSAKDALSVVCRELDGSSETYRLFHVLGSAASD---P-------RIPSEKIG--PARCSYRRV  135 (177)
T ss_pred             EEe------------ccccchhhHHHHHHHHccCCCCceEEEEeCCcCCc---h-------hhhhhhhh--hcCCceEEE
Confidence            544            4445778999999999998    777765432211   1       22233322  245677778


Q ss_pred             eeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcCCC
Q 023205          202 RPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDPV  267 (286)
Q Consensus       202 Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~~  267 (286)
                      ..|++....                                   .-.|.+=+.+++.++++++.+.
T Consensus       136 ~lgf~~~~~-----------------------------------~~rwlt~~ei~~gv~~~~~~~~  166 (177)
T PRK08309        136 ILGFVLEDT-----------------------------------YSRWLTHEEISDGVIKAIESDA  166 (177)
T ss_pred             EEeEEEeCC-----------------------------------ccccCchHHHHHHHHHHHhcCC
Confidence            888886432                                   2347888999999999997654

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=99.15  E-value=4e-10  Score=93.80  Aligned_cols=155  Identities=17%  Similarity=0.080  Sum_probs=111.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc------cccCCceeEEeccCCCHhH----HHHHhcC--CCE
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDS----WKEALDG--VTA  124 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~------~~~~~~~~~i~~Dl~d~~~----~~~~~~~--~d~  124 (286)
                      .=.+|||||..||+..+++|.++|.+|+++.|+.++...      +...-.++++..|+++++.    +.+.+.+  +.+
T Consensus        50 ~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~~~VgI  129 (312)
T KOG1014|consen   50 SWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAGLDVGI  129 (312)
T ss_pred             CEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcCCceEE
Confidence            458999999999999999999999999999999877321      2222468899999987654    4444444  579


Q ss_pred             EEEccccCCCcc------------hhhhhhhHHHHHHHHHHHH----cCCCEEEEEecCCcCCCCccccchHHHHHHHHH
Q 023205          125 VISCVGGFGSNS------------YMYKINGTANINAIRAASE----KGVKRFVYISAADFGVANYLLQGYYEGKRAAET  188 (286)
Q Consensus       125 vi~~a~~~~~~~------------~~~~~~~~~~~~l~~~a~~----~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~  188 (286)
                      +|+|+|...+.+            ....+|+.++..+.+....    .+-.-+|++||...-.+.+....|+++|...+.
T Consensus       130 LVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~ag~~p~p~~s~ysasK~~v~~  209 (312)
T KOG1014|consen  130 LVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFAGLIPTPLLSVYSASKAFVDF  209 (312)
T ss_pred             EEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEeccccccccChhHHHHHHHHHHHHH
Confidence            999999765221            2335677776655554432    333469999996444444556789999997765


Q ss_pred             HHH------HhCCCcEEEEeeCeeecCCC
Q 023205          189 ELL------TRYPYGGVILRPGFIYGTRT  211 (286)
Q Consensus       189 ~~~------~~~g~~~~ilRp~~v~g~~~  211 (286)
                      +-.      +..|+.+-.+-|..|..+..
T Consensus       210 ~S~~L~~Ey~~~gI~Vq~v~p~~VaTkm~  238 (312)
T KOG1014|consen  210 FSRCLQKEYESKGIFVQSVIPYLVATKMA  238 (312)
T ss_pred             HHHHHHHHHHhcCeEEEEeehhheecccc
Confidence            332      25799999999999987654

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.10  E-value=1.4e-10  Score=88.03  Aligned_cols=207  Identities=17%  Similarity=0.164  Sum_probs=140.4

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCccc--ccccCCceeEEeccCCCHhHHHHHhc-------CCCEEEE
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSL--RDSWANNVIWHQGNLLSSDSWKEALD-------GVTAVIS  127 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~--~~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d~vi~  127 (286)
                      -..+|||+...+|+..++.|.++|..|..++-..++-.  .+....++.|...|+++++++..++.       ..|+.++
T Consensus        10 lvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakelg~~~vf~padvtsekdv~aala~ak~kfgrld~~vn   89 (260)
T KOG1199|consen   10 LVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKELGGKVVFTPADVTSEKDVRAALAKAKAKFGRLDALVN   89 (260)
T ss_pred             eeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHhCCceEEeccccCcHHHHHHHHHHHHhhccceeeeee
Confidence            45799999999999999999999999999998765532  23445789999999999999888774       3699999


Q ss_pred             ccccCC----------------CcchhhhhhhHHHHHHHHHHHH---------cCCC-EEEEEecCCcCCCCccccchHH
Q 023205          128 CVGGFG----------------SNSYMYKINGTANINAIRAASE---------KGVK-RFVYISAADFGVANYLLQGYYE  181 (286)
Q Consensus       128 ~a~~~~----------------~~~~~~~~~~~~~~~l~~~a~~---------~~v~-~~v~~Ss~~~~~~~~~~~~y~~  181 (286)
                      |||...                +.....++|+.|+.|+++....         .|-+ -+|...|...-+-.-....|.+
T Consensus        90 cagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaafdgq~gqaaysa  169 (260)
T KOG1199|consen   90 CAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAFDGQTGQAAYSA  169 (260)
T ss_pred             ccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeeecCccchhhhhc
Confidence            998531                1124457899999999886542         1221 2445545321122234567999


Q ss_pred             HHHHHHHHH----HH--hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHH
Q 023205          182 GKRAAETEL----LT--RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVV  255 (286)
Q Consensus       182 sK~~~E~~~----~~--~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dv  255 (286)
                      ||...-.+.    ++  ..|++++.+-||.+-.|-..           +.-+.........-++|.      ..-+..+-
T Consensus       170 skgaivgmtlpiardla~~gir~~tiapglf~tplls-----------slpekv~~fla~~ipfps------rlg~p~ey  232 (260)
T KOG1199|consen  170 SKGAIVGMTLPIARDLAGDGIRFNTIAPGLFDTPLLS-----------SLPEKVKSFLAQLIPFPS------RLGHPHEY  232 (260)
T ss_pred             ccCceEeeechhhhhcccCceEEEeecccccCChhhh-----------hhhHHHHHHHHHhCCCch------hcCChHHH
Confidence            998655432    22  46899999999887554331           122223333322223331      23466777


Q ss_pred             HHHHHHHhcCCCCCCCeeEeccccc
Q 023205          256 AKVAVRAATDPVFPPGIVDVHGILR  280 (286)
Q Consensus       256 a~~~~~~l~~~~~~~~~~~l~~~~~  280 (286)
                      +..+..+++++...++++.+.|.-.
T Consensus       233 ahlvqaiienp~lngevir~dgalr  257 (260)
T KOG1199|consen  233 AHLVQAIIENPYLNGEVIRFDGALR  257 (260)
T ss_pred             HHHHHHHHhCcccCCeEEEecceec
Confidence            8888888899999899999887544

>PTZ00325 malate dehydrogenase; Provisional

Probab=99.03  E-value=3.7e-09  Score=90.85  Aligned_cols=157  Identities=13%  Similarity=0.080  Sum_probs=108.3

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCC--CeEEEEecCCCcccc-cccCCceeEEeccCCCHhHHHHHhcCCCEEEEcccc
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRG--LTVASLSRSGRSSLR-DSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG  131 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g--~~V~~l~R~~~~~~~-~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~  131 (286)
                      .|+||+|+|++|.||+.++..|..++  .++.+++++..+... +.......+...+.+|+.++.+.++++|+||+++|.
T Consensus         7 ~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~~~g~a~Dl~~~~~~~~v~~~td~~~~~~~l~gaDvVVitaG~   86 (321)
T PTZ00325          7 KMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVGAPGVAADLSHIDTPAKVTGYADGELWEKALRGADLVLICAGV   86 (321)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCCCcccccchhhcCcCceEEEecCCCchHHHhCCCCEEEECCCC
Confidence            46799999999999999999998665  589999984322111 111111123344666666667899999999999998


Q ss_pred             CCCc----chhhhhhhHHHHHHHHHHHHcCCCEEEEEecCC-----c-------CCC-CccccchHHHHHHHHH---HHH
Q 023205          132 FGSN----SYMYKINGTANINAIRAASEKGVKRFVYISAAD-----F-------GVA-NYLLQGYYEGKRAAET---ELL  191 (286)
Q Consensus       132 ~~~~----~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~~-----~-------~~~-~~~~~~y~~sK~~~E~---~~~  191 (286)
                      ...+    ...+..|+....++++++++++++++|+++|--     +       ... .++...||.+-...-+   ++.
T Consensus        87 ~~~~~~tR~dll~~N~~i~~~i~~~i~~~~~~~iviv~SNPvdv~~~~~~~~~~~~sg~p~~~viG~g~LDs~R~r~~la  166 (321)
T PTZ00325         87 PRKPGMTRDDLFNTNAPIVRDLVAAVASSAPKAIVGIVSNPVNSTVPIAAETLKKAGVYDPRKLFGVTTLDVVRARKFVA  166 (321)
T ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHHHHHHHHHhhhhhccCCChhheeechhHHHHHHHHHHH
Confidence            5432    456788999999999999999999999999931     0       111 1233445554222222   334


Q ss_pred             HhCCCcEEEEeeCeeecCCCC
Q 023205          192 TRYPYGGVILRPGFIYGTRTV  212 (286)
Q Consensus       192 ~~~g~~~~ilRp~~v~g~~~~  212 (286)
                      +..+++..-++ ++++|....
T Consensus       167 ~~l~v~~~~V~-~~VlGeHGd  186 (321)
T PTZ00325        167 EALGMNPYDVN-VPVVGGHSG  186 (321)
T ss_pred             HHhCcChhheE-EEEEeecCC
Confidence            56788888888 888887665

>KOG3019 consensus Predicted nucleoside-diphosphate sugar epimerase [Nucleotide transport and metabolism]

Probab=99.01  E-value=1.3e-09  Score=86.27  Aligned_cols=202  Identities=15%  Similarity=0.125  Sum_probs=116.6

Q ss_pred             CCCeEEEEcCCChhHHHHHH-----HHHHCC----CeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEE
Q 023205           55 PSEKLLVLGGNGFVGSHICR-----EALDRG----LTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAV  125 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~-----~Ll~~g----~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~v  125 (286)
                      +.++.++-+++|+|+..|..     ++-+.+    |+|++++|.+.+.       ++++-+.|..-.      .-.|+..
T Consensus        11 ~sr~a~~~~~~g~i~~nl~~~~~~~H~t~~~~a~~h~vtv~sR~pg~~-------ritw~el~~~Gi------p~sc~a~   77 (315)
T KOG3019|consen   11 KSRDAVSNWSNGIIRENLGSETSCCHDTNVHSADNHAVTVLSRSPGKA-------RITWPELDFPGI------PISCVAG   77 (315)
T ss_pred             ccccCCCCccccchhccccCcccccccCCCCcccccceEEEecCCCCc-------ccccchhcCCCC------ceehHHH
Confidence            44567788889999987776     333333    7999999998762       333333333211      0124444


Q ss_pred             EEcccc-----CCCcchhhhhhh-----HHHHHHHHHHHHcC--CCEEEEEecCCcCCC--------Ccccc---chHHH
Q 023205          126 ISCVGG-----FGSNSYMYKING-----TANINAIRAASEKG--VKRFVYISAADFGVA--------NYLLQ---GYYEG  182 (286)
Q Consensus       126 i~~a~~-----~~~~~~~~~~~~-----~~~~~l~~~a~~~~--v~~~v~~Ss~~~~~~--------~~~~~---~y~~s  182 (286)
                      ++.++.     ..-+...++-++     ..+..++++..++.  .+.+|++|...+..+        +.+..   ...+.
T Consensus        78 vna~g~n~l~P~rRWsp~fqkev~gSRi~~t~~la~aI~~aPq~~~~~Vlv~gva~y~pS~s~eY~e~~~~qgfd~~srL  157 (315)
T KOG3019|consen   78 VNAVGNNALLPIRRWSPEFQKEVKGSRIRVTSKLADAINNAPQEARPTVLVSGVAVYVPSESQEYSEKIVHQGFDILSRL  157 (315)
T ss_pred             HhhhhhhccCchhhcCHHHHHHhhcceeeHHHHHHHHHhcCCCCCCCeEEEEeeEEeccccccccccccccCChHHHHHH
Confidence            444432     222333333333     33456677777654  357888887432221        11111   12222


Q ss_pred             HHHHHHHHHH-hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCC-CCCCccCCCccHHHHHHHHH
Q 023205          183 KRAAETELLT-RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLP-LVGPLFTPPVNVTVVAKVAV  260 (286)
Q Consensus       183 K~~~E~~~~~-~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~i~v~Dva~~~~  260 (286)
                      -.+-|...+. ....+++++|.|.|.|.+..            ...+|+-..+.+..=| ..|.++++|||++|++..|-
T Consensus       158 ~l~WE~aA~~~~~~~r~~~iR~GvVlG~gGG------------a~~~M~lpF~~g~GGPlGsG~Q~fpWIHv~DL~~li~  225 (315)
T KOG3019|consen  158 CLEWEGAALKANKDVRVALIRIGVVLGKGGG------------ALAMMILPFQMGAGGPLGSGQQWFPWIHVDDLVNLIY  225 (315)
T ss_pred             HHHHHHHhhccCcceeEEEEEEeEEEecCCc------------chhhhhhhhhhccCCcCCCCCeeeeeeehHHHHHHHH
Confidence            2233332332 34589999999999998752            2233322222222223 23567999999999999999


Q ss_pred             HHhcCCCCCCCeeEeccccccc
Q 023205          261 RAATDPVFPPGIVDVHGILRYS  282 (286)
Q Consensus       261 ~~l~~~~~~~~~~~l~~~~~~s  282 (286)
                      ++++++.. .+++|-+.|...+
T Consensus       226 ~ale~~~v-~GViNgvAP~~~~  246 (315)
T KOG3019|consen  226 EALENPSV-KGVINGVAPNPVR  246 (315)
T ss_pred             HHHhcCCC-CceecccCCCccc
Confidence            99999775 6788877777654

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=98.94  E-value=4.5e-09  Score=91.63  Aligned_cols=90  Identities=24%  Similarity=0.298  Sum_probs=73.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCC-CeEEEEecCCCcccc--cccCCceeEEeccCCCHhHHHHHhcCCCEEEEccccC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRG-LTVASLSRSGRSSLR--DSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGF  132 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g-~~V~~l~R~~~~~~~--~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~~  132 (286)
                      |++|+|.|+ |+||+.++..|++++ .+|++.+|+.++..+  .....+++.++.|..|.+.+.+++++.|+||+++++.
T Consensus         1 m~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~~al~~li~~~d~VIn~~p~~   79 (389)
T COG1748           1 MMKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAADVDALVALIKDFDLVINAAPPF   79 (389)
T ss_pred             CCcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccChHHHHHHHhcCCEEEEeCCch
Confidence            578999998 999999999999998 899999999766432  2223489999999999999999999999999999774


Q ss_pred             CCcchhhhhhhHHHHHHHHHHHHcCC
Q 023205          133 GSNSYMYKINGTANINAIRAASEKGV  158 (286)
Q Consensus       133 ~~~~~~~~~~~~~~~~l~~~a~~~~v  158 (286)
                      -            ..+++++|.++|+
T Consensus        80 ~------------~~~i~ka~i~~gv   93 (389)
T COG1748          80 V------------DLTILKACIKTGV   93 (389)
T ss_pred             h------------hHHHHHHHHHhCC
Confidence            2            1244666666665

>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.91  E-value=1.2e-08  Score=81.20  Aligned_cols=196  Identities=12%  Similarity=0.082  Sum_probs=120.2

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEe--------ccCCCHhHHHHHhc------
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQ--------GNLLSSDSWKEALD------  120 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~--------~Dl~d~~~~~~~~~------  120 (286)
                      +++.+||||++..||.-+++.+.+.+.+.....++.....    ..++.+..        +|++....++..++      
T Consensus         5 ~r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~----~~~L~v~~gd~~v~~~g~~~e~~~l~al~e~~r~k~   80 (253)
T KOG1204|consen    5 MRKVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAE----LEGLKVAYGDDFVHVVGDITEEQLLGALREAPRKKG   80 (253)
T ss_pred             cceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhccccc----ccceEEEecCCcceechHHHHHHHHHHHHhhhhhcC
Confidence            4567899999999999999999998765443333322111    23334333        34444443333332      


Q ss_pred             -CCCEEEEccccCCC-------------cchhhhhhhHHHHHHHHHHHHc----C-CCEEEEEecCCcCCCCccccchHH
Q 023205          121 -GVTAVISCVGGFGS-------------NSYMYKINGTANINAIRAASEK----G-VKRFVYISAADFGVANYLLQGYYE  181 (286)
Q Consensus       121 -~~d~vi~~a~~~~~-------------~~~~~~~~~~~~~~l~~~a~~~----~-v~~~v~~Ss~~~~~~~~~~~~y~~  181 (286)
                       +-|.||||||...+             +...++.|+.....+.+.+...    . .+-+|++||...-.+-.....|+.
T Consensus        81 gkr~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav~p~~~wa~yc~  160 (253)
T KOG1204|consen   81 GKRDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAVRPFSSWAAYCS  160 (253)
T ss_pred             CceeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhhccccHHHHhhh
Confidence             35999999997532             2456788988888777766432    1 367999999544444445677999


Q ss_pred             HHHHHHHHHHH----h-CCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHH
Q 023205          182 GKRAAETELLT----R-YPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVA  256 (286)
Q Consensus       182 sK~~~E~~~~~----~-~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva  256 (286)
                      +|++.+.+++.    . .++.+..++||.+=.+.+....... .--+....++.....           .-..++..+.|
T Consensus       161 ~KaAr~m~f~~lA~EEp~~v~vl~~aPGvvDT~mq~~ir~~~-~~~p~~l~~f~el~~-----------~~~ll~~~~~a  228 (253)
T KOG1204|consen  161 SKAARNMYFMVLASEEPFDVRVLNYAPGVVDTQMQVCIRETS-RMTPADLKMFKELKE-----------SGQLLDPQVTA  228 (253)
T ss_pred             hHHHHHHHHHHHhhcCccceeEEEccCCcccchhHHHHhhcc-CCCHHHHHHHHHHHh-----------cCCcCChhhHH
Confidence            99999987753    4 4889999999988432221110000 000112222222221           12346778889


Q ss_pred             HHHHHHhcCC
Q 023205          257 KVAVRAATDP  266 (286)
Q Consensus       257 ~~~~~~l~~~  266 (286)
                      +.+..++++.
T Consensus       229 ~~l~~L~e~~  238 (253)
T KOG1204|consen  229 KVLAKLLEKG  238 (253)
T ss_pred             HHHHHHHHhc
Confidence            9999988876

>PLN00106 malate dehydrogenase

Probab=98.85  E-value=4e-08  Score=84.57  Aligned_cols=154  Identities=14%  Similarity=0.054  Sum_probs=107.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCC--CeEEEEecCCCcccccc-cCCceeEEeccCCCHhHHHHHhcCCCEEEEccccC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRG--LTVASLSRSGRSSLRDS-WANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGF  132 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g--~~V~~l~R~~~~~~~~~-~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~~  132 (286)
                      ..||+|+|++|.||+.++..|..++  .++.++++++....... ..........++.+.+++.+.++++|+|||+||..
T Consensus        18 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~~~g~a~Dl~~~~~~~~i~~~~~~~d~~~~l~~aDiVVitAG~~   97 (323)
T PLN00106         18 GFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIANTPGVAADVSHINTPAQVRGFLGDDQLGDALKGADLVIIPAGVP   97 (323)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCCCCeeEchhhhCCcCceEEEEeCCCCHHHHcCCCCEEEEeCCCC
Confidence            3589999999999999999999776  48999998772211111 11111222334444556788999999999999975


Q ss_pred             CC----cchhhhhhhHHHHHHHHHHHHcCCCEEEEEecC--C----c------C-CCCccccchHHHHHHHHHH---HHH
Q 023205          133 GS----NSYMYKINGTANINAIRAASEKGVKRFVYISAA--D----F------G-VANYLLQGYYEGKRAAETE---LLT  192 (286)
Q Consensus       133 ~~----~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~--~----~------~-~~~~~~~~y~~sK~~~E~~---~~~  192 (286)
                      ..    .......|.....++++.+++.+.+.+|+++|-  +    .      . ...++...||.++...+++   +.+
T Consensus        98 ~~~g~~R~dll~~N~~i~~~i~~~i~~~~p~aivivvSNPvD~~~~i~t~~~~~~s~~p~~~viG~~~LDs~Rl~~~lA~  177 (323)
T PLN00106         98 RKPGMTRDDLFNINAGIVKTLCEAVAKHCPNALVNIISNPVNSTVPIAAEVLKKAGVYDPKKLFGVTTLDVVRANTFVAE  177 (323)
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCCCCcceEEEEecchHHHHHHHHHH
Confidence            43    235668899999999999999999999999982  1    0      0 1112345677777777663   335


Q ss_pred             hCCCcEEEEeeCeeecCC
Q 023205          193 RYPYGGVILRPGFIYGTR  210 (286)
Q Consensus       193 ~~g~~~~ilRp~~v~g~~  210 (286)
                      ..|++...+. ++++|..
T Consensus       178 ~lgv~~~~V~-~~ViGeH  194 (323)
T PLN00106        178 KKGLDPADVD-VPVVGGH  194 (323)
T ss_pred             HhCCChhheE-EEEEEeC
Confidence            7888888886 5666655

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=98.84  E-value=3.4e-08  Score=85.48  Aligned_cols=158  Identities=10%  Similarity=0.037  Sum_probs=96.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCC-------CeEEEEecCCCcccccc----cCCceeEEeccCCCHhHHHHHhcCCCE
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRG-------LTVASLSRSGRSSLRDS----WANNVIWHQGNLLSSDSWKEALDGVTA  124 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g-------~~V~~l~R~~~~~~~~~----~~~~~~~i~~Dl~d~~~~~~~~~~~d~  124 (286)
                      +.+|+||||+|++|++++..|+.++       .+|+++++++.......    ..+.......|+....++.+.++++|+
T Consensus         2 ~~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d~~~~~~~~~~~~~~~~~~l~~aDi   81 (325)
T cd01336           2 PIRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDCAFPLLKSVVATTDPEEAFKDVDV   81 (325)
T ss_pred             CeEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhhccccccCCceecCCHHHHhCCCCE
Confidence            3579999999999999999999854       48999999653211110    000110122354445667788999999


Q ss_pred             EEEccccCCCc----chhhhhhhHHHHHHHHHHHHcC-CCE-EEEEecCC---------c-CCCCcc---ccchHHHHHH
Q 023205          125 VISCVGGFGSN----SYMYKINGTANINAIRAASEKG-VKR-FVYISAAD---------F-GVANYL---LQGYYEGKRA  185 (286)
Q Consensus       125 vi~~a~~~~~~----~~~~~~~~~~~~~l~~~a~~~~-v~~-~v~~Ss~~---------~-~~~~~~---~~~y~~sK~~  185 (286)
                      |||+||....+    ...++.|+.....+.+..++.. .+- ++.+|...         + +.....   ...+..+...
T Consensus        82 VI~tAG~~~~~~~~R~~l~~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~~~k~~~~~~~~~ig~gt~LDs~R~  161 (325)
T cd01336          82 AILVGAMPRKEGMERKDLLKANVKIFKEQGEALDKYAKKNVKVLVVGNPANTNALILLKYAPSIPKENFTALTRLDHNRA  161 (325)
T ss_pred             EEEeCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEecCcHHHHHHHHHHHcCCCCHHHEEeeehHHHHHH
Confidence            99999976432    4567888888888888887774 344 44444310         0 000000   0112222222


Q ss_pred             HHHHHHHhCCCcEEEEeeCeeecCCCCCc
Q 023205          186 AETELLTRYPYGGVILRPGFIYGTRTVGG  214 (286)
Q Consensus       186 ~E~~~~~~~g~~~~ilRp~~v~g~~~~~~  214 (286)
                      .. ++.+..+++...++-..++|......
T Consensus       162 r~-~la~~l~v~~~~v~~~~V~GeHG~s~  189 (325)
T cd01336         162 KS-QIALKLGVPVSDVKNVIIWGNHSSTQ  189 (325)
T ss_pred             HH-HHHHHhCcChhhceEeEEEEcCCCCe
Confidence            22 24456788888887777888765433

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK06720 hypothetical protein; Provisional

Probab=98.80  E-value=2.4e-08  Score=78.25  Aligned_cols=77  Identities=12%  Similarity=0.244  Sum_probs=61.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCccc---cc--ccCCceeEEeccCCCHhHHHHHh-------cCCC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSL---RD--SWANNVIWHQGNLLSSDSWKEAL-------DGVT  123 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~---~~--~~~~~~~~i~~Dl~d~~~~~~~~-------~~~d  123 (286)
                      .++++||||+|+||..+++.|.+.|++|++++|+.+...   .+  .......++.+|+++.+++.+++       .++|
T Consensus        16 gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G~iD   95 (169)
T PRK06720         16 GKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAFSRID   95 (169)
T ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            578999999999999999999999999999998754321   11  11235678899999988877654       3589


Q ss_pred             EEEEccccC
Q 023205          124 AVISCVGGF  132 (286)
Q Consensus       124 ~vi~~a~~~  132 (286)
                      ++|||||..
T Consensus        96 ilVnnAG~~  104 (169)
T PRK06720         96 MLFQNAGLY  104 (169)
T ss_pred             EEEECCCcC
Confidence            999999864

>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]

Probab=98.75  E-value=1.3e-07  Score=76.44  Aligned_cols=155  Identities=15%  Similarity=0.137  Sum_probs=107.9

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCC-----eEEEEecCCCcccc------ccc---CCceeEEeccCCCHhHHHHHhc
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGL-----TVASLSRSGRSSLR------DSW---ANNVIWHQGNLLSSDSWKEALD  120 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~-----~V~~l~R~~~~~~~------~~~---~~~~~~i~~Dl~d~~~~~~~~~  120 (286)
                      ++|.++|||++..+|-.++.+|++...     ++.+..|+-++...      ...   ...++++..|+++-.++.++.+
T Consensus         2 ~RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~   81 (341)
T KOG1478|consen    2 MRKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASK   81 (341)
T ss_pred             CceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHH
Confidence            356789999999999999999999753     46667777655311      111   3478899999999877766654


Q ss_pred             -------CCCEEEEccccCCCc-------------------------------------chhhhhhhHHHHHHHHHHHH-
Q 023205          121 -------GVTAVISCVGGFGSN-------------------------------------SYMYKINGTANINAIRAASE-  155 (286)
Q Consensus       121 -------~~d~vi~~a~~~~~~-------------------------------------~~~~~~~~~~~~~l~~~a~~-  155 (286)
                             ..|.|+.|||.+.++                                     ...|+.|+.|..-+++.... 
T Consensus        82 di~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l~pl  161 (341)
T KOG1478|consen   82 DIKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRELEPL  161 (341)
T ss_pred             HHHHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhhhhH
Confidence                   579999999854211                                     14568888888877666543 


Q ss_pred             ---cCCCEEEEEecCCcCCCC---------ccccchHHHHHHHHHHHHH------hCCCcEEEEeeCeeecC
Q 023205          156 ---KGVKRFVYISAADFGVAN---------YLLQGYYEGKRAAETELLT------RYPYGGVILRPGFIYGT  209 (286)
Q Consensus       156 ---~~v~~~v~~Ss~~~~~~~---------~~~~~y~~sK~~~E~~~~~------~~g~~~~ilRp~~v~g~  209 (286)
                         ....++|++||.......         ....+|.-||...+-+-.+      ..|+.-.++.||.....
T Consensus       162 l~~~~~~~lvwtSS~~a~kk~lsleD~q~~kg~~pY~sSKrl~DlLh~A~~~~~~~~g~~qyvv~pg~~tt~  233 (341)
T KOG1478|consen  162 LCHSDNPQLVWTSSRMARKKNLSLEDFQHSKGKEPYSSSKRLTDLLHVALNRNFKPLGINQYVVQPGIFTTN  233 (341)
T ss_pred             hhcCCCCeEEEEeecccccccCCHHHHhhhcCCCCcchhHHHHHHHHHHHhccccccchhhhcccCceeecc
Confidence               223489999996433221         2346799999988753332      35788888999877643

>PRK09620 hypothetical protein; Provisional

Probab=98.71  E-value=6.2e-08  Score=79.48  Aligned_cols=78  Identities=24%  Similarity=0.270  Sum_probs=55.1

Q ss_pred             CCeEEEEcCC----------------ChhHHHHHHHHHHCCCeEEEEecCCCccccccc-CCceeEEeccCCCHhHHHHH
Q 023205           56 SEKLLVLGGN----------------GFVGSHICREALDRGLTVASLSRSGRSSLRDSW-ANNVIWHQGNLLSSDSWKEA  118 (286)
Q Consensus        56 ~~~VlVtGat----------------G~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~-~~~~~~i~~Dl~d~~~~~~~  118 (286)
                      .++||||+|.                ||+|++++++|+++|++|+++++.......... ...+..+.+|....+.+.++
T Consensus         3 gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~~~~~~~~~~~V~s~~d~~~~l~~~   82 (229)
T PRK09620          3 GKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPNDINNQLELHPFEGIIDLQDKMKSI   82 (229)
T ss_pred             CCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCcccCCceeEEEEecHHHHHHHHHHH
Confidence            5789999775                999999999999999999999864321111100 12334456633334677787


Q ss_pred             hc--CCCEEEEccccCC
Q 023205          119 LD--GVTAVISCVGGFG  133 (286)
Q Consensus       119 ~~--~~d~vi~~a~~~~  133 (286)
                      ++  ++|+|||+|+..+
T Consensus        83 ~~~~~~D~VIH~AAvsD   99 (229)
T PRK09620         83 ITHEKVDAVIMAAAGSD   99 (229)
T ss_pred             hcccCCCEEEECccccc
Confidence            84  6899999999864

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=98.68  E-value=1.4e-06  Score=75.95  Aligned_cols=77  Identities=14%  Similarity=0.130  Sum_probs=58.1

Q ss_pred             CCCeEEEEcCCChhHHH--HHHHHHHCCCeEEEEecCCCccc--------------c---cccCCceeEEeccCCCHhHH
Q 023205           55 PSEKLLVLGGNGFVGSH--ICREALDRGLTVASLSRSGRSSL--------------R---DSWANNVIWHQGNLLSSDSW  115 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~--l~~~Ll~~g~~V~~l~R~~~~~~--------------~---~~~~~~~~~i~~Dl~d~~~~  115 (286)
                      .+|++||||+++.+|.+  +++.| +.|.+|+++.+..++..              .   +.....+..+.+|+++++.+
T Consensus        40 ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~v  118 (398)
T PRK13656         40 GPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEIK  118 (398)
T ss_pred             CCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHH
Confidence            35799999999999999  89999 99999998885432110              1   11122466789999999887


Q ss_pred             HHHhc-------CCCEEEEccccC
Q 023205          116 KEALD-------GVTAVISCVGGF  132 (286)
Q Consensus       116 ~~~~~-------~~d~vi~~a~~~  132 (286)
                      +++++       ++|++||+++..
T Consensus       119 ~~lie~I~e~~G~IDiLVnSaA~~  142 (398)
T PRK13656        119 QKVIELIKQDLGQVDLVVYSLASP  142 (398)
T ss_pred             HHHHHHHHHhcCCCCEEEECCccC
Confidence            76654       589999999854

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=98.66  E-value=8.7e-08  Score=85.42  Aligned_cols=73  Identities=36%  Similarity=0.490  Sum_probs=59.1

Q ss_pred             EEEEcCCChhHHHHHHHHHHCC-C-eEEEEecCCCcccccc---cCCceeEEeccCCCHhHHHHHhcCCCEEEEccccC
Q 023205           59 LLVLGGNGFVGSHICREALDRG-L-TVASLSRSGRSSLRDS---WANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGF  132 (286)
Q Consensus        59 VlVtGatG~iG~~l~~~Ll~~g-~-~V~~l~R~~~~~~~~~---~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~~  132 (286)
                      |+|.|+ |++|+.+++.|++++ . +|++.+|+.++.....   ...++++++.|+.|.+++.++++++|+||+|+++.
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~dvVin~~gp~   78 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDPESLAELLRGCDVVINCAGPF   78 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTHHHHHHHHTTSSEEEE-SSGG
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCHHHHHHHHhcCCEEEECCccc
Confidence            799999 999999999999986 4 8999999987632211   45799999999999999999999999999999986

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=98.64  E-value=1.5e-07  Score=77.48  Aligned_cols=72  Identities=11%  Similarity=0.056  Sum_probs=52.3

Q ss_pred             EEE-cCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCC--HhHHHHHhcCCCEEEEccccCC
Q 023205           60 LVL-GGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLS--SDSWKEALDGVTAVISCVGGFG  133 (286)
Q Consensus        60 lVt-GatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d--~~~~~~~~~~~d~vi~~a~~~~  133 (286)
                      .|| .+||++|++++++|+++|++|+++.|......  ....+++++.++-.+  .+.+.+.++++|+|||+||..+
T Consensus        19 ~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~~--~~~~~v~~i~v~s~~~m~~~l~~~~~~~DivIh~AAvsd   93 (229)
T PRK06732         19 GITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAVKP--EPHPNLSIIEIENVDDLLETLEPLVKDHDVLIHSMAVSD   93 (229)
T ss_pred             eecCccchHHHHHHHHHHHhCCCEEEEEECcccccC--CCCCCeEEEEEecHHHHHHHHHHHhcCCCEEEeCCccCC
Confidence            344 67899999999999999999999998643211  112467777654322  2456667788999999999865

>PRK05086 malate dehydrogenase; Provisional

Probab=98.63  E-value=5.3e-07  Score=77.69  Aligned_cols=108  Identities=19%  Similarity=0.183  Sum_probs=77.7

Q ss_pred             CeEEEEcCCChhHHHHHHHHHH-C--CCeEEEEecCCCcccc--cccC-CceeEEeccCCCHhHHHHHhcCCCEEEEccc
Q 023205           57 EKLLVLGGNGFVGSHICREALD-R--GLTVASLSRSGRSSLR--DSWA-NNVIWHQGNLLSSDSWKEALDGVTAVISCVG  130 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~-~--g~~V~~l~R~~~~~~~--~~~~-~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~  130 (286)
                      |+|+|+||+|.+|++++..|.. .  ++++.+++|++.....  .... +....+.+  .+.+++.+.++++|+||.++|
T Consensus         1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~~~g~alDl~~~~~~~~i~~--~~~~d~~~~l~~~DiVIitaG   78 (312)
T PRK05086          1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPVTPGVAVDLSHIPTAVKIKG--FSGEDPTPALEGADVVLISAG   78 (312)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCCCcceehhhhcCCCCceEEE--eCCCCHHHHcCCCCEEEEcCC
Confidence            5899999999999999998865 2  3578888887432100  1111 11223333  223455677899999999999


Q ss_pred             cCCCc----chhhhhhhHHHHHHHHHHHHcCCCEEEEEec
Q 023205          131 GFGSN----SYMYKINGTANINAIRAASEKGVKRFVYISA  166 (286)
Q Consensus       131 ~~~~~----~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss  166 (286)
                      ....+    ...+..|.....++++.+++.+.+++|.+.|
T Consensus        79 ~~~~~~~~R~dll~~N~~i~~~ii~~i~~~~~~~ivivvs  118 (312)
T PRK05086         79 VARKPGMDRSDLFNVNAGIVKNLVEKVAKTCPKACIGIIT  118 (312)
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence            76433    3566788889999999999999999999988

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=98.60  E-value=8.1e-06  Score=65.39  Aligned_cols=211  Identities=12%  Similarity=0.068  Sum_probs=129.2

Q ss_pred             CCCeEEEEcCC--ChhHHHHHHHHHHCCCeEEEEecCCCcc--ccccc--CCceeEEeccCCCHhHHHHHhc-------C
Q 023205           55 PSEKLLVLGGN--GFVGSHICREALDRGLTVASLSRSGRSS--LRDSW--ANNVIWHQGNLLSSDSWKEALD-------G  121 (286)
Q Consensus        55 ~~~~VlVtGat--G~iG~~l~~~Ll~~g~~V~~l~R~~~~~--~~~~~--~~~~~~i~~Dl~d~~~~~~~~~-------~  121 (286)
                      ..|++||+|-.  ..|+..+++.|.++|.++......+.-.  ..+..  ...-.+++||+++.++++.+|+       .
T Consensus         5 ~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e~l~krv~~la~~~~s~~v~~cDV~~d~~i~~~f~~i~~~~g~   84 (259)
T COG0623           5 EGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGERLEKRVEELAEELGSDLVLPCDVTNDESIDALFATIKKKWGK   84 (259)
T ss_pred             CCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHHHhhccCCeEEecCCCCHHHHHHHHHHHHHhhCc
Confidence            46899999965  6899999999999999988777665211  11111  1134578999999998888875       4


Q ss_pred             CCEEEEccccCCCc----------c----hhhhhhhHHHHHHHHHHHHcC--CCEEEEEecCCcCCCCccccchHHHHHH
Q 023205          122 VTAVISCVGGFGSN----------S----YMYKINGTANINAIRAASEKG--VKRFVYISAADFGVANYLLQGYYEGKRA  185 (286)
Q Consensus       122 ~d~vi~~a~~~~~~----------~----~~~~~~~~~~~~l~~~a~~~~--v~~~v~~Ss~~~~~~~~~~~~y~~sK~~  185 (286)
                      .|.++|+.+..+..          .    ...++.......+.++++..-  -..++-+|=......-+..+..+..|..
T Consensus        85 lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~ggSiltLtYlgs~r~vPnYNvMGvAKAa  164 (259)
T COG0623          85 LDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNNGGSILTLTYLGSERVVPNYNVMGVAKAA  164 (259)
T ss_pred             ccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCCCCcEEEEEeccceeecCCCchhHHHHHH
Confidence            79999999875411          1    122334444445555555421  1234433321111222345678899999


Q ss_pred             HHHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHH
Q 023205          186 AETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVA  259 (286)
Q Consensus       186 ~E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~  259 (286)
                      .|.-++-      ..|++++.+..|.+=.-...+        ++.+ ..+........++       ...++.+||+...
T Consensus       165 LEasvRyLA~dlG~~gIRVNaISAGPIrTLAasg--------I~~f-~~~l~~~e~~aPl-------~r~vt~eeVG~tA  228 (259)
T COG0623         165 LEASVRYLAADLGKEGIRVNAISAGPIRTLAASG--------IGDF-RKMLKENEANAPL-------RRNVTIEEVGNTA  228 (259)
T ss_pred             HHHHHHHHHHHhCccCeEEeeecccchHHHHhhc--------cccH-HHHHHHHHhhCCc-------cCCCCHHHhhhhH
Confidence            9986542      468888888876652111111        1222 2233333322222       2347899999999


Q ss_pred             HHHhcC--CCCCCCeeEecccccc
Q 023205          260 VRAATD--PVFPPGIVDVHGILRY  281 (286)
Q Consensus       260 ~~~l~~--~~~~~~~~~l~~~~~~  281 (286)
                      ..++.+  ....|++.++.++-++
T Consensus       229 ~fLlSdLssgiTGei~yVD~G~~i  252 (259)
T COG0623         229 AFLLSDLSSGITGEIIYVDSGYHI  252 (259)
T ss_pred             HHHhcchhcccccceEEEcCCcee
Confidence            888865  3356888888876554

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=98.56  E-value=8.8e-07  Score=73.80  Aligned_cols=74  Identities=12%  Similarity=0.232  Sum_probs=57.1

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhc--CCCEEEEccccC
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD--GVTAVISCVGGF  132 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~--~~d~vi~~a~~~  132 (286)
                      |+|||+||||. |+.+++.|.+.|++|++.+|......... ..+...+..+..|.+++.+.++  ++|+||+++.|+
T Consensus         1 m~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~-~~g~~~v~~g~l~~~~l~~~l~~~~i~~VIDAtHPf   76 (256)
T TIGR00715         1 MTVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYP-IHQALTVHTGALDPQELREFLKRHSIDILVDATHPF   76 (256)
T ss_pred             CeEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCcccccc-ccCCceEEECCCCHHHHHHHHHhcCCCEEEEcCCHH
Confidence            57999999999 99999999999999999999876532211 1223344556678888888886  489999998764

This enzyme was found to be a monomer by gel filtration.

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=98.49  E-value=4e-07  Score=77.09  Aligned_cols=76  Identities=22%  Similarity=0.428  Sum_probs=62.6

Q ss_pred             eEEEEcCCChhHHHHHHHHHH----CCCeEEEEecCCCcccc----------cccCCceeEEeccCCCHhHHHHHhcCCC
Q 023205           58 KLLVLGGNGFVGSHICREALD----RGLTVASLSRSGRSSLR----------DSWANNVIWHQGNLLSSDSWKEALDGVT  123 (286)
Q Consensus        58 ~VlVtGatG~iG~~l~~~Ll~----~g~~V~~l~R~~~~~~~----------~~~~~~~~~i~~Dl~d~~~~~~~~~~~d  123 (286)
                      -++|.||+||.|.++++++.+    .+...-+..|++.+...          ......+ ++.+|..|++++.+..+.+.
T Consensus         7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~-i~i~D~~n~~Sl~emak~~~   85 (423)
T KOG2733|consen    7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSV-ILIADSANEASLDEMAKQAR   85 (423)
T ss_pred             eEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccce-EEEecCCCHHHHHHHHhhhE
Confidence            489999999999999999999    56788888898766311          1122344 88999999999999999999


Q ss_pred             EEEEccccCCC
Q 023205          124 AVISCVGGFGS  134 (286)
Q Consensus       124 ~vi~~a~~~~~  134 (286)
                      +|+||+||...
T Consensus        86 vivN~vGPyR~   96 (423)
T KOG2733|consen   86 VIVNCVGPYRF   96 (423)
T ss_pred             EEEecccccee
Confidence            99999999753

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=98.42  E-value=6.5e-07  Score=71.96  Aligned_cols=76  Identities=20%  Similarity=0.195  Sum_probs=60.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc--ccc--CCceeEEeccCCCHhHHHHHhcCCCEEEEcccc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSW--ANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG  131 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~--~~~--~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~  131 (286)
                      .++++|+||+|.+|+.+++.|.+.|++|++++|+.++...  ...  ..+..+..+|..+.+++.++++++|+||++.+.
T Consensus        28 ~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~diVi~at~~  107 (194)
T cd01078          28 GKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAAIKGADVVFAAGAA  107 (194)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHhcCCEEEECCCC
Confidence            5789999999999999999999999999999998644211  101  124556677888999999999999999997643

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=98.36  E-value=1.2e-05  Score=69.61  Aligned_cols=150  Identities=10%  Similarity=-0.018  Sum_probs=100.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC-------eEEEEecCCCc--ccccc--c-------CCceeEEeccCCCHhHHHH
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGL-------TVASLSRSGRS--SLRDS--W-------ANNVIWHQGNLLSSDSWKE  117 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~-------~V~~l~R~~~~--~~~~~--~-------~~~~~~i~~Dl~d~~~~~~  117 (286)
                      +++|.|+|++|.+|..++..|+..+.       ++.+++.....  ...+.  .       ..++++.       ....+
T Consensus         2 p~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~-------~~~~~   74 (322)
T cd01338           2 PVRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVIT-------DDPNV   74 (322)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEEe-------cCcHH
Confidence            46899999999999999999998773       78888885432  11100  0       0122221       12246


Q ss_pred             HhcCCCEEEEccccCCCc----chhhhhhhHHHHHHHHHHHHcCC-CEEEEEec-CC-------cCCC--CccccchHHH
Q 023205          118 ALDGVTAVISCVGGFGSN----SYMYKINGTANINAIRAASEKGV-KRFVYISA-AD-------FGVA--NYLLQGYYEG  182 (286)
Q Consensus       118 ~~~~~d~vi~~a~~~~~~----~~~~~~~~~~~~~l~~~a~~~~v-~~~v~~Ss-~~-------~~~~--~~~~~~y~~s  182 (286)
                      .++++|+||.+||....+    .+.++.|......+.+..++.+. .-++.+-| ..       +...  -++...|+.+
T Consensus        75 ~~~daDivvitaG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~~~k~sg~~p~~~ViG~t  154 (322)
T cd01338          75 AFKDADWALLVGAKPRGPGMERADLLKANGKIFTAQGKALNDVASRDVKVLVVGNPCNTNALIAMKNAPDIPPDNFTAMT  154 (322)
T ss_pred             HhCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecCcHHHHHHHHHHHcCCCChHheEEeh
Confidence            788999999999975422    35567888888888888888773 54444444 10       0111  1234568888


Q ss_pred             HHHHHHHHH---HhCCCcEEEEeeCeeecCCCC
Q 023205          183 KRAAETELL---TRYPYGGVILRPGFIYGTRTV  212 (286)
Q Consensus       183 K~~~E~~~~---~~~g~~~~ilRp~~v~g~~~~  212 (286)
                      +...+++..   +..|++...+|...+||+...
T Consensus       155 ~LDs~Rl~~~la~~lgv~~~~v~~~~V~GeHG~  187 (322)
T cd01338         155 RLDHNRAKSQLAKKAGVPVTDVKNMVIWGNHSP  187 (322)
T ss_pred             HHHHHHHHHHHHHHhCcChhHeEEEEEEeCCcc
Confidence            888887554   467899999998899998754

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd00704 MDH Malate dehydrogenase

Probab=98.34  E-value=8e-06  Score=70.65  Aligned_cols=102  Identities=14%  Similarity=0.031  Sum_probs=71.1

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC-------eEEEEecCCCcccccccCCceeEEeccCCCH-----------hHHHHHh
Q 023205           58 KLLVLGGNGFVGSHICREALDRGL-------TVASLSRSGRSSLRDSWANNVIWHQGNLLSS-----------DSWKEAL  119 (286)
Q Consensus        58 ~VlVtGatG~iG~~l~~~Ll~~g~-------~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~-----------~~~~~~~  119 (286)
                      +|.|+||+|.+|+.++..|..++.       ++++++++...       +..+-...|+.|.           ....+.+
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~-------~~~~g~~~Dl~d~~~~~~~~~~i~~~~~~~~   74 (323)
T cd00704           2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAM-------KALEGVVMELQDCAFPLLKGVVITTDPEEAF   74 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCcc-------CccceeeeehhhhcccccCCcEEecChHHHh
Confidence            799999999999999999998652       48888887521       1122223333332           3456789


Q ss_pred             cCCCEEEEccccCCCc----chhhhhhhHHHHHHHHHHHHcC-CCEEEEEec
Q 023205          120 DGVTAVISCVGGFGSN----SYMYKINGTANINAIRAASEKG-VKRFVYISA  166 (286)
Q Consensus       120 ~~~d~vi~~a~~~~~~----~~~~~~~~~~~~~l~~~a~~~~-v~~~v~~Ss  166 (286)
                      +++|+|||+||....+    .+.+..|.....++....++.. .+-++.+-|
T Consensus        75 ~~aDiVVitAG~~~~~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvs  126 (323)
T cd00704          75 KDVDVAILVGAFPRKPGMERADLLRKNAKIFKEQGEALNKVAKPTVKVLVVG  126 (323)
T ss_pred             CCCCEEEEeCCCCCCcCCcHHHHHHHhHHHHHHHHHHHHHhCCCCeEEEEeC
Confidence            9999999999975433    3556778888888888888883 554444434

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase

Probab=98.32  E-value=4.7e-06  Score=73.62  Aligned_cols=99  Identities=18%  Similarity=0.269  Sum_probs=64.7

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHC-CCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHH-HhcCCCEEEEcccc
Q 023205           54 PPSEKLLVLGGNGFVGSHICREALDR-GLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKE-ALDGVTAVISCVGG  131 (286)
Q Consensus        54 ~~~~~VlVtGatG~iG~~l~~~Ll~~-g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~-~~~~~d~vi~~a~~  131 (286)
                      .++++|.|.||||++|..+++.|.++ ..+|..+.++..... ........+..+|+.+.++++. .++++|+||.+.+.
T Consensus        36 ~~~~kVaIvGATG~vG~eLlrlL~~hP~~el~~l~s~~saG~-~i~~~~~~l~~~~~~~~~~~~~~~~~~~DvVf~Alp~  114 (381)
T PLN02968         36 EEKKRIFVLGASGYTGAEVRRLLANHPDFEITVMTADRKAGQ-SFGSVFPHLITQDLPNLVAVKDADFSDVDAVFCCLPH  114 (381)
T ss_pred             ccccEEEEECCCChHHHHHHHHHHhCCCCeEEEEEChhhcCC-CchhhCccccCccccceecCCHHHhcCCCEEEEcCCH
Confidence            35679999999999999999999998 469999988644311 1011112233344443333332 25889999998754


Q ss_pred             CCCcchhhhhhhHHHHHHHHHHHHcCCCEEEEEecC
Q 023205          132 FGSNSYMYKINGTANINAIRAASEKGVKRFVYISAA  167 (286)
Q Consensus       132 ~~~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~  167 (286)
                      .            ...+++..+ +.+ .++|-+|+.
T Consensus       115 ~------------~s~~i~~~~-~~g-~~VIDlSs~  136 (381)
T PLN02968        115 G------------TTQEIIKAL-PKD-LKIVDLSAD  136 (381)
T ss_pred             H------------HHHHHHHHH-hCC-CEEEEcCch
Confidence            1            344556665 345 479999984

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=98.29  E-value=9.5e-06  Score=70.23  Aligned_cols=150  Identities=11%  Similarity=-0.030  Sum_probs=92.1

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC-------eEEEEecCCCcccccccCCceeEEeccCCCHh-----------HHHHHh
Q 023205           58 KLLVLGGNGFVGSHICREALDRGL-------TVASLSRSGRSSLRDSWANNVIWHQGNLLSSD-----------SWKEAL  119 (286)
Q Consensus        58 ~VlVtGatG~iG~~l~~~Ll~~g~-------~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~-----------~~~~~~  119 (286)
                      +|.|+|++|.+|+.++..|...+.       +++++++++...       ..+-...|+.|..           ...+.+
T Consensus         1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~-------~a~g~~~Dl~d~~~~~~~~~~~~~~~~~~~   73 (324)
T TIGR01758         1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMK-------VLEGVVMELMDCAFPLLDGVVPTHDPAVAF   73 (324)
T ss_pred             CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCccc-------ccceeEeehhcccchhcCceeccCChHHHh
Confidence            589999999999999999998552       588888865431       1122233333322           345788


Q ss_pred             cCCCEEEEccccCCC----cchhhhhhhHHHHHHHHHHHHcC-CCEEEEEec-CC----------cCCCCccccchH--H
Q 023205          120 DGVTAVISCVGGFGS----NSYMYKINGTANINAIRAASEKG-VKRFVYISA-AD----------FGVANYLLQGYY--E  181 (286)
Q Consensus       120 ~~~d~vi~~a~~~~~----~~~~~~~~~~~~~~l~~~a~~~~-v~~~v~~Ss-~~----------~~~~~~~~~~y~--~  181 (286)
                      +++|+|||+||....    ....+..|+.....+.+..++.. .+-++.+-| ..          .+......-+-+  .
T Consensus        74 ~~aDiVVitAG~~~~~~~tr~~ll~~N~~i~k~i~~~i~~~~~~~~iiivvsNPvDv~t~v~~~~sg~~~~~vig~gt~L  153 (324)
T TIGR01758        74 TDVDVAILVGAFPRKEGMERRDLLSKNVKIFKEQGRALDKLAKKDCKVLVVGNPANTNALVLSNYAPSIPPKNFSALTRL  153 (324)
T ss_pred             CCCCEEEEcCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeCCcHHHHHHHHHHHcCCCCcceEEEeeeh
Confidence            999999999997532    23556788888888899888874 554444444 10          001110000000  0


Q ss_pred             HHHHHHHHHHHhCCCcEEEEeeCeeecCCCCCc
Q 023205          182 GKRAAETELLTRYPYGGVILRPGFIYGTRTVGG  214 (286)
Q Consensus       182 sK~~~E~~~~~~~g~~~~ilRp~~v~g~~~~~~  214 (286)
                      --.....++.+..+++..-++-..|+|......
T Consensus       154 Ds~R~r~~la~~l~v~~~~V~~~~V~GeHG~s~  186 (324)
T TIGR01758       154 DHNRALAQVAERAGVPVSDVKNVIIWGNHSSTQ  186 (324)
T ss_pred             HHHHHHHHHHHHhCCChhhceEeEEEECCCCCc
Confidence            011122234556788888887778888765533

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=98.28  E-value=4.1e-06  Score=74.35  Aligned_cols=73  Identities=18%  Similarity=0.211  Sum_probs=57.5

Q ss_pred             CCCeEEEEcC----------------CChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHH
Q 023205           55 PSEKLLVLGG----------------NGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEA  118 (286)
Q Consensus        55 ~~~~VlVtGa----------------tG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~  118 (286)
                      ..++|+||||                +|.+|.+++++|.++|++|+++.++.+..    ...+  +...|+++.+++.++
T Consensus       187 ~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~~~----~~~~--~~~~dv~~~~~~~~~  260 (399)
T PRK05579        187 AGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVNLP----TPAG--VKRIDVESAQEMLDA  260 (399)
T ss_pred             CCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcccc----CCCC--cEEEccCCHHHHHHH
Confidence            4689999999                89999999999999999999999875321    1122  345689888777666


Q ss_pred             h----cCCCEEEEccccCC
Q 023205          119 L----DGVTAVISCVGGFG  133 (286)
Q Consensus       119 ~----~~~d~vi~~a~~~~  133 (286)
                      +    ..+|++||+||..+
T Consensus       261 v~~~~~~~DilI~~Aav~d  279 (399)
T PRK05579        261 VLAALPQADIFIMAAAVAD  279 (399)
T ss_pred             HHHhcCCCCEEEEcccccc
Confidence            5    46899999999753

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=98.14  E-value=2.2e-05  Score=64.49  Aligned_cols=74  Identities=24%  Similarity=0.361  Sum_probs=62.2

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCccccc-ccCCceeEEeccCCCHhHHHHH-hcCCCEEEEcccc
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRD-SWANNVIWHQGNLLSSDSWKEA-LDGVTAVISCVGG  131 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~-~~~~~~~~i~~Dl~d~~~~~~~-~~~~d~vi~~a~~  131 (286)
                      |+++|.|+ |.+|..+++.|.+.|++|+++.++++..... ........+.+|-+|++.++++ +.++|+++-+.+.
T Consensus         1 m~iiIiG~-G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~~~~~~~v~gd~t~~~~L~~agi~~aD~vva~t~~   76 (225)
T COG0569           1 MKIIIIGA-GRVGRSVARELSEEGHNVVLIDRDEERVEEFLADELDTHVVIGDATDEDVLEEAGIDDADAVVAATGN   76 (225)
T ss_pred             CEEEEECC-cHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhhhcceEEEEecCCCHHHHHhcCCCcCCEEEEeeCC
Confidence            57899996 9999999999999999999999998764331 2235788999999999999988 7889999987543

>PRK14982 acyl-ACP reductase; Provisional

Probab=98.12  E-value=4.5e-06  Score=72.14  Aligned_cols=73  Identities=21%  Similarity=0.212  Sum_probs=52.7

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHC-C-CeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEcccc
Q 023205           54 PPSEKLLVLGGNGFVGSHICREALDR-G-LTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG  131 (286)
Q Consensus        54 ~~~~~VlVtGatG~iG~~l~~~Ll~~-g-~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~  131 (286)
                      ...++|+||||+|++|+.++++|+++ + .+++++.|+..+... ..   .++..+|+   .++.+++.++|+|||+++.
T Consensus       153 l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~-La---~el~~~~i---~~l~~~l~~aDiVv~~ts~  225 (340)
T PRK14982        153 LSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQE-LQ---AELGGGKI---LSLEEALPEADIVVWVASM  225 (340)
T ss_pred             cCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHH-HH---HHhccccH---HhHHHHHccCCEEEECCcC
Confidence            34679999999999999999999865 4 589999987544211 10   11222343   3467888999999999986


Q ss_pred             CC
Q 023205          132 FG  133 (286)
Q Consensus       132 ~~  133 (286)
                      ..
T Consensus       226 ~~  227 (340)
T PRK14982        226 PK  227 (340)
T ss_pred             Cc
Confidence            54

>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional

Probab=98.11  E-value=3.3e-05  Score=67.39  Aligned_cols=92  Identities=17%  Similarity=0.221  Sum_probs=58.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC---eEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccccC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGL---TVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGF  132 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~---~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~~  132 (286)
                      +++|+|.||||++|..+++.|.+++|   ++.++.++.+....... .+.++...|+.+.     .++++|+||.+++..
T Consensus         1 ~~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~~g~~l~~-~g~~i~v~d~~~~-----~~~~vDvVf~A~g~g   74 (334)
T PRK14874          1 GYNVAVVGATGAVGREMLNILEERNFPVDKLRLLASARSAGKELSF-KGKELKVEDLTTF-----DFSGVDIALFSAGGS   74 (334)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccccCCCeeee-CCceeEEeeCCHH-----HHcCCCEEEECCChH
Confidence            46899999999999999999999776   56888876543221111 2234444455432     346899999987542


Q ss_pred             CCcchhhhhhhHHHHHHHHHHHHcCCCEEEEEec
Q 023205          133 GSNSYMYKINGTANINAIRAASEKGVKRFVYISA  166 (286)
Q Consensus       133 ~~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss  166 (286)
                                  ....++....++|. .+|=.|+
T Consensus        75 ------------~s~~~~~~~~~~G~-~VIDlS~   95 (334)
T PRK14874         75 ------------VSKKYAPKAAAAGA-VVIDNSS   95 (334)
T ss_pred             ------------HHHHHHHHHHhCCC-EEEECCc
Confidence                        12233444445565 5555555

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=98.07  E-value=9.5e-06  Score=68.39  Aligned_cols=76  Identities=20%  Similarity=0.252  Sum_probs=58.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc--cccCCceeEEeccCCCHhHHHHHhcCCCEEEEccccCC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFG  133 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~--~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~~~  133 (286)
                      ...++|-|||||.|..++++|..+|.+-.+..|+..+...  ..+  +.++-..++.++..+++...+.++|+||+||..
T Consensus         6 e~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~L--G~~~~~~p~~~p~~~~~~~~~~~VVlncvGPyt   83 (382)
T COG3268           6 EYDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASL--GPEAAVFPLGVPAALEAMASRTQVVLNCVGPYT   83 (382)
T ss_pred             ceeEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhc--CccccccCCCCHHHHHHHHhcceEEEecccccc
Confidence            4469999999999999999999999888778888655321  222  223333445568999999999999999999974

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=98.06  E-value=5.5e-05  Score=57.38  Aligned_cols=103  Identities=16%  Similarity=0.175  Sum_probs=71.9

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCC--CeEEEEecCCCccccc---------ccCCceeEEeccCCCHhHHHHHhcCCCEE
Q 023205           57 EKLLVLGGNGFVGSHICREALDRG--LTVASLSRSGRSSLRD---------SWANNVIWHQGNLLSSDSWKEALDGVTAV  125 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g--~~V~~l~R~~~~~~~~---------~~~~~~~~i~~Dl~d~~~~~~~~~~~d~v  125 (286)
                      |||.|+|++|.+|++++-.|...+  .++++++++++.....         .......+...   +    .+.++++|+|
T Consensus         1 ~KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~~---~----~~~~~~aDiv   73 (141)
T PF00056_consen    1 MKVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITSG---D----YEALKDADIV   73 (141)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEES---S----GGGGTTESEE
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhcccccccccc---c----ccccccccEE
Confidence            589999999999999999999987  4899999986532110         00112233322   2    2457899999


Q ss_pred             EEccccCCC----cchhhhhhhHHHHHHHHHHHHcCCCEEEEEec
Q 023205          126 ISCVGGFGS----NSYMYKINGTANINAIRAASEKGVKRFVYISA  166 (286)
Q Consensus       126 i~~a~~~~~----~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss  166 (286)
                      +.++|....    ..+.++.|......+.+...+.+.+-++.+-|
T Consensus        74 vitag~~~~~g~sR~~ll~~N~~i~~~~~~~i~~~~p~~~vivvt  118 (141)
T PF00056_consen   74 VITAGVPRKPGMSRLDLLEANAKIVKEIAKKIAKYAPDAIVIVVT  118 (141)
T ss_dssp             EETTSTSSSTTSSHHHHHHHHHHHHHHHHHHHHHHSTTSEEEE-S
T ss_pred             EEeccccccccccHHHHHHHhHhHHHHHHHHHHHhCCccEEEEeC
Confidence            999987533    23566788888888899888887654554444

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=97.99  E-value=5.2e-05  Score=65.91  Aligned_cols=92  Identities=17%  Similarity=0.211  Sum_probs=55.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC---eEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccccC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGL---TVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGF  132 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~---~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~~  132 (286)
                      |++|.|+||||++|..+++.|.++++   ++..+...... -+.....+   ...++.+.+.. + ++++|+||.+++..
T Consensus         4 ~~~IaIvGATG~vG~eLlrlL~~~~hP~~~l~~v~s~~~a-G~~l~~~~---~~l~~~~~~~~-~-~~~vD~vFla~p~~   77 (336)
T PRK05671          4 PLDIAVVGATGTVGEALVQILEERDFPVGTLHLLASSESA-GHSVPFAG---KNLRVREVDSF-D-FSQVQLAFFAAGAA   77 (336)
T ss_pred             CCEEEEEccCCHHHHHHHHHHhhCCCCceEEEEEECcccC-CCeeccCC---cceEEeeCChH-H-hcCCCEEEEcCCHH
Confidence            46899999999999999999998765   34444333221 11111111   12333332222 1 47899999987531


Q ss_pred             CCcchhhhhhhHHHHHHHHHHHHcCCCEEEEEec
Q 023205          133 GSNSYMYKINGTANINAIRAASEKGVKRFVYISA  166 (286)
Q Consensus       133 ~~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss  166 (286)
                                  ....++..+.+.|+ ++|=.|+
T Consensus        78 ------------~s~~~v~~~~~~G~-~VIDlS~   98 (336)
T PRK05671         78 ------------VSRSFAEKARAAGC-SVIDLSG   98 (336)
T ss_pred             ------------HHHHHHHHHHHCCC-eEEECch
Confidence                        11235677777776 5776676

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=97.97  E-value=2.5e-05  Score=66.68  Aligned_cols=76  Identities=13%  Similarity=0.145  Sum_probs=58.1

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCe-EEEEecCCC---cccc--cc---cCCceeEEeccCCCHhHHHHHhcCCCEE
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLT-VASLSRSGR---SSLR--DS---WANNVIWHQGNLLSSDSWKEALDGVTAV  125 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~-V~~l~R~~~---~~~~--~~---~~~~~~~i~~Dl~d~~~~~~~~~~~d~v  125 (286)
                      ..++++|+|| |.+|++++..|.+.|.+ |++++|+.+   +...  +.   ....+.+...|+.+.+.+.+.++.+|+|
T Consensus       125 ~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~Dil  203 (289)
T PRK12548        125 KGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIASSDIL  203 (289)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhccCCEE
Confidence            3578999998 89999999999999985 999999862   2111  11   1124456678888888888888899999


Q ss_pred             EEcccc
Q 023205          126 ISCVGG  131 (286)
Q Consensus       126 i~~a~~  131 (286)
                      ||+...
T Consensus       204 INaTp~  209 (289)
T PRK12548        204 VNATLV  209 (289)
T ss_pred             EEeCCC
Confidence            998754

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=97.95  E-value=2.1e-05  Score=64.66  Aligned_cols=67  Identities=13%  Similarity=0.134  Sum_probs=47.3

Q ss_pred             EEE-cCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHh-------cCCCEEEEcccc
Q 023205           60 LVL-GGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEAL-------DGVTAVISCVGG  131 (286)
Q Consensus        60 lVt-GatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~-------~~~d~vi~~a~~  131 (286)
                      .|| .++|++|.+++++|+++|++|+++.|....  ..   .  ....+|+.+.+++.+++       ..+|++|||||.
T Consensus        18 ~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~~~~l--~~---~--~~~~~Dv~d~~s~~~l~~~v~~~~g~iDiLVnnAgv   90 (227)
T TIGR02114        18 SITNHSTGHLGKIITETFLSAGHEVTLVTTKRAL--KP---E--PHPNLSIREIETTKDLLITLKELVQEHDILIHSMAV   90 (227)
T ss_pred             eecCCcccHHHHHHHHHHHHCCCEEEEEcChhhc--cc---c--cCCcceeecHHHHHHHHHHHHHHcCCCCEEEECCEe
Confidence            344 458999999999999999999998764211  00   0  11346888776665443       468999999996


Q ss_pred             CC
Q 023205          132 FG  133 (286)
Q Consensus       132 ~~  133 (286)
                      ..
T Consensus        91 ~d   92 (227)
T TIGR02114        91 SD   92 (227)
T ss_pred             cc
Confidence            53

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated

Probab=97.93  E-value=6.6e-05  Score=65.72  Aligned_cols=98  Identities=16%  Similarity=0.208  Sum_probs=60.2

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHC-CCeEEEEecCCCcccc-cccCCceeEE-eccCCCHhHHHHHhcCCCEEEEcccc
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDR-GLTVASLSRSGRSSLR-DSWANNVIWH-QGNLLSSDSWKEALDGVTAVISCVGG  131 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~-g~~V~~l~R~~~~~~~-~~~~~~~~~i-~~Dl~d~~~~~~~~~~~d~vi~~a~~  131 (286)
                      ||++|+|+||||++|..+++.|.+. +.++.++.++.+.... ....+.+..+ ..++.+.+..  .+.++|+||.|.+.
T Consensus         1 ~m~kVaIiGAtG~vG~~l~~~L~~~p~~elv~v~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~--~~~~vD~Vf~alP~   78 (343)
T PRK00436          1 MMIKVGIVGASGYTGGELLRLLLNHPEVEIVAVTSRSSAGKPLSDVHPHLRGLVDLVLEPLDPE--ILAGADVVFLALPH   78 (343)
T ss_pred             CCeEEEEECCCCHHHHHHHHHHHcCCCceEEEEECccccCcchHHhCcccccccCceeecCCHH--HhcCCCEEEECCCc
Confidence            4679999999999999999999987 4688887764322110 0001112111 2233333322  45789999998654


Q ss_pred             CCCcchhhhhhhHHHHHHHHHHHHcCCCEEEEEecC
Q 023205          132 FGSNSYMYKINGTANINAIRAASEKGVKRFVYISAA  167 (286)
Q Consensus       132 ~~~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~  167 (286)
                                  ....+++..+.++|+ ++|=.|+.
T Consensus        79 ------------~~~~~~v~~a~~aG~-~VID~S~~  101 (343)
T PRK00436         79 ------------GVSMDLAPQLLEAGV-KVIDLSAD  101 (343)
T ss_pred             ------------HHHHHHHHHHHhCCC-EEEECCcc
Confidence                        122355666666664 78877773

>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate

Probab=97.92  E-value=3.9e-05  Score=56.65  Aligned_cols=89  Identities=17%  Similarity=0.352  Sum_probs=53.9

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCC-CeEEEEecCCC-cc--cccccC-----CceeEEeccCCCHhHHHHHhcCCCEEEEc
Q 023205           58 KLLVLGGNGFVGSHICREALDRG-LTVASLSRSGR-SS--LRDSWA-----NNVIWHQGNLLSSDSWKEALDGVTAVISC  128 (286)
Q Consensus        58 ~VlVtGatG~iG~~l~~~Ll~~g-~~V~~l~R~~~-~~--~~~~~~-----~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~  128 (286)
                      ||.|+||||++|+.+++.|.++. .++..+..+.. ..  ......     ..+.+..   .+.+    .+.++|+||.|
T Consensus         1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~---~~~~----~~~~~Dvvf~a   73 (121)
T PF01118_consen    1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLSVED---ADPE----ELSDVDVVFLA   73 (121)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEBEEE---TSGH----HHTTESEEEE-
T ss_pred             CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccceeEee---cchh----HhhcCCEEEec
Confidence            68999999999999999999975 46555444433 21  111111     1222222   2333    34889999999


Q ss_pred             cccCCCcchhhhhhhHHHHHHHHHHHHcCCCEEEEEec
Q 023205          129 VGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISA  166 (286)
Q Consensus       129 a~~~~~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss  166 (286)
                      .+.            .....+...+.+.|+ ++|=.|+
T Consensus        74 ~~~------------~~~~~~~~~~~~~g~-~ViD~s~   98 (121)
T PF01118_consen   74 LPH------------GASKELAPKLLKAGI-KVIDLSG   98 (121)
T ss_dssp             SCH------------HHHHHHHHHHHHTTS-EEEESSS
T ss_pred             Cch------------hHHHHHHHHHhhCCc-EEEeCCH
Confidence            654            223355666677787 5666665

This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=97.89  E-value=5.9e-05  Score=66.82  Aligned_cols=106  Identities=15%  Similarity=0.158  Sum_probs=71.6

Q ss_pred             CCCCeEEEEcC----------------CChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHH-H
Q 023205           54 PPSEKLLVLGG----------------NGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSW-K  116 (286)
Q Consensus        54 ~~~~~VlVtGa----------------tG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~-~  116 (286)
                      ...++|+||||                +|.+|..++++|..+|++|+++.+......    ...+  ...|+.+.+++ +
T Consensus       183 ~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~~----~~~~--~~~~v~~~~~~~~  256 (390)
T TIGR00521       183 LEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLLT----PPGV--KSIKVSTAEEMLE  256 (390)
T ss_pred             cCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccCC----CCCc--EEEEeccHHHHHH
Confidence            45689999998                467999999999999999999987754321    1223  45688888777 4


Q ss_pred             HHh----cCCCEEEEccccCCCcc------------hhhhhhhHHHHHHHHHHHHcCCCEEEEEec
Q 023205          117 EAL----DGVTAVISCVGGFGSNS------------YMYKINGTANINAIRAASEKGVKRFVYISA  166 (286)
Q Consensus       117 ~~~----~~~d~vi~~a~~~~~~~------------~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss  166 (286)
                      .++    .++|++|++||..++..            ..+.++...+..++...++...+ .++++-
T Consensus       257 ~~~~~~~~~~D~~i~~Aavsd~~~~~~~~~Ki~~~~~~~~l~L~~~pdil~~l~~~~~~-~~lvgF  321 (390)
T TIGR00521       257 AALNELAKDFDIFISAAAVADFKPKTVFEGKIKKQGEELSLKLVKNPDIIAEVRKIKKH-QVIVGF  321 (390)
T ss_pred             HHHHhhcccCCEEEEccccccccccccccccccccCCceeEEEEeCcHHHHHHHhhCCC-cEEEEE
Confidence            444    36899999999864311            11234555566777777654333 344443

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=97.88  E-value=7.5e-05  Score=68.08  Aligned_cols=73  Identities=21%  Similarity=0.210  Sum_probs=60.4

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHH-hcCCCEEEEccc
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEA-LDGVTAVISCVG  130 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~-~~~~d~vi~~a~  130 (286)
                      |+|+|+|+ |.+|+++++.|.++|++|++++++++.........+++++.+|.++.+.++++ ++++|.||.+..
T Consensus         1 m~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~a~~vi~~~~   74 (453)
T PRK09496          1 MKIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLRRLQDRLDVRTVVGNGSSPDVLREAGAEDADLLIAVTD   74 (453)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhhcCEEEEEeCCCCHHHHHHcCCCcCCEEEEecC
Confidence            47999997 99999999999999999999999876522211124689999999999999988 889999998753

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=97.85  E-value=8.9e-05  Score=72.84  Aligned_cols=77  Identities=21%  Similarity=0.122  Sum_probs=59.9

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCC-Ce-------------EEEEecCCCccccc-ccCCceeEEeccCCCHhHHHHHh
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRG-LT-------------VASLSRSGRSSLRD-SWANNVIWHQGNLLSSDSWKEAL  119 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g-~~-------------V~~l~R~~~~~~~~-~~~~~~~~i~~Dl~d~~~~~~~~  119 (286)
                      .+++|+|.|+ |++|+..++.|.+.+ ++             |.+.+++.+..... ...++++.+..|+.|.+++.+++
T Consensus       568 ~~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~~~~~~v~lDv~D~e~L~~~v  646 (1042)
T PLN02819        568 KSQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGIENAEAVQLDVSDSESLLKYV  646 (1042)
T ss_pred             cCCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhcCCCceEEeecCCHHHHHHhh
Confidence            4679999997 999999999998763 33             77777665442211 11246788999999999999999


Q ss_pred             cCCCEEEEccccC
Q 023205          120 DGVTAVISCVGGF  132 (286)
Q Consensus       120 ~~~d~vi~~a~~~  132 (286)
                      +++|+|+++.++.
T Consensus       647 ~~~DaVIsalP~~  659 (1042)
T PLN02819        647 SQVDVVISLLPAS  659 (1042)
T ss_pred             cCCCEEEECCCch
Confidence            9999999998763

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=97.84  E-value=0.00015  Score=62.47  Aligned_cols=106  Identities=15%  Similarity=0.121  Sum_probs=68.7

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCC--eEEEEecCC--Cccccccc-------CCceeEEeccCCCHhHHHHHhcCCCEE
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGL--TVASLSRSG--RSSLRDSW-------ANNVIWHQGNLLSSDSWKEALDGVTAV  125 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~--~V~~l~R~~--~~~~~~~~-------~~~~~~i~~Dl~d~~~~~~~~~~~d~v  125 (286)
                      |+|.|+|+||++|..++..|+..|+  +|++++|+.  +.......       ..+... ....+  .++ +.++++|+|
T Consensus         1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~~-~i~~~--~d~-~~l~~aDiV   76 (309)
T cd05294           1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGIDA-EIKIS--SDL-SDVAGSDIV   76 (309)
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhccCCCc-EEEEC--CCH-HHhCCCCEE
Confidence            5899999999999999999999985  599999954  22111100       001110 11111  123 348999999


Q ss_pred             EEccccCCCc----chhhhhhhHHHHHHHHHHHHcCCC-EEEEEec
Q 023205          126 ISCVGGFGSN----SYMYKINGTANINAIRAASEKGVK-RFVYISA  166 (286)
Q Consensus       126 i~~a~~~~~~----~~~~~~~~~~~~~l~~~a~~~~v~-~~v~~Ss  166 (286)
                      |.++|....+    ...++.|......+++...+.+.+ .+|.+++
T Consensus        77 iitag~p~~~~~~r~dl~~~n~~i~~~~~~~i~~~~~~~~viv~~n  122 (309)
T cd05294          77 IITAGVPRKEGMSRLDLAKKNAKIVKKYAKQIAEFAPDTKILVVTN  122 (309)
T ss_pred             EEecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence            9999864322    345567778888888887776544 4555555

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=97.82  E-value=0.0001  Score=58.39  Aligned_cols=66  Identities=20%  Similarity=0.170  Sum_probs=42.5

Q ss_pred             cCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhH----HHHHhcCCCEEEEccccCCC
Q 023205           63 GGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDS----WKEALDGVTAVISCVGGFGS  134 (286)
Q Consensus        63 GatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~----~~~~~~~~d~vi~~a~~~~~  134 (286)
                      -+||..|..|+++++.+|++|+.+.....-.    .+.+++.+..+  ..++    +.+.+.++|++||+|+..++
T Consensus        26 ~SSG~~G~~lA~~~~~~Ga~V~li~g~~~~~----~p~~~~~i~v~--sa~em~~~~~~~~~~~Di~I~aAAVsDf   95 (185)
T PF04127_consen   26 RSSGKMGAALAEEAARRGAEVTLIHGPSSLP----PPPGVKVIRVE--SAEEMLEAVKELLPSADIIIMAAAVSDF   95 (185)
T ss_dssp             S--SHHHHHHHHHHHHTT-EEEEEE-TTS--------TTEEEEE-S--SHHHHHHHHHHHGGGGSEEEE-SB--SE
T ss_pred             CCcCHHHHHHHHHHHHCCCEEEEEecCcccc----ccccceEEEec--chhhhhhhhccccCcceeEEEecchhhe
Confidence            4689999999999999999999999874221    13477777654  4444    44455678999999998753

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms)

Probab=97.75  E-value=0.00023  Score=62.19  Aligned_cols=68  Identities=15%  Similarity=0.307  Sum_probs=45.6

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCeE---EEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEcccc
Q 023205           58 KLLVLGGNGFVGSHICREALDRGLTV---ASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG  131 (286)
Q Consensus        58 ~VlVtGatG~iG~~l~~~Ll~~g~~V---~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~  131 (286)
                      +|+|.||||++|..+++.|.+++|.+   ..+.+..+...... ..+......|+. .    ..++++|+||.+++.
T Consensus         1 ~VaIvGAtG~vG~eLi~lL~~~~hp~~~l~~~as~~~~g~~~~-~~~~~~~~~~~~-~----~~~~~~D~v~~a~g~   71 (339)
T TIGR01296         1 NVAIVGATGAVGQEMLKILEERNFPIDKLVLLASDRSAGRKVT-FKGKELEVNEAK-I----ESFEGIDIALFSAGG   71 (339)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhCCCChhhEEEEeccccCCCeee-eCCeeEEEEeCC-h----HHhcCCCEEEECCCH
Confidence            58999999999999999999987754   34445543321111 123455555653 1    235789999999865

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978.

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=97.73  E-value=0.0015  Score=56.37  Aligned_cols=148  Identities=11%  Similarity=0.165  Sum_probs=89.4

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCC--CeEEEEecCCCccccccc---------CCceeEEeccCCCHhHHHHHhcCCCEE
Q 023205           57 EKLLVLGGNGFVGSHICREALDRG--LTVASLSRSGRSSLRDSW---------ANNVIWHQGNLLSSDSWKEALDGVTAV  125 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g--~~V~~l~R~~~~~~~~~~---------~~~~~~i~~Dl~d~~~~~~~~~~~d~v  125 (286)
                      ++|.|.|+ |.+|+.++..|+..|  ++|.+++|+.+.......         .....+..   .+.    +.++++|+|
T Consensus         1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~---~~~----~~l~~aDIV   72 (306)
T cd05291           1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKA---GDY----SDCKDADIV   72 (306)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEEc---CCH----HHhCCCCEE
Confidence            37999996 999999999999998  689999998765321110         11222222   222    236899999


Q ss_pred             EEccccCCCc----chhhhhhhHHHHHHHHHHHHcCCCEEEEEec-CC---------c-CCCCccccchHHH--HHHHHH
Q 023205          126 ISCVGGFGSN----SYMYKINGTANINAIRAASEKGVKRFVYISA-AD---------F-GVANYLLQGYYEG--KRAAET  188 (286)
Q Consensus       126 i~~a~~~~~~----~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss-~~---------~-~~~~~~~~~y~~s--K~~~E~  188 (286)
                      |.++|....+    ...++.|..-...+.+..++.+.+-++.+-| .+         + +.+....-+.+..  -.....
T Consensus        73 Iitag~~~~~g~~R~dll~~N~~i~~~~~~~i~~~~~~~~vivvsNP~d~~~~~~~~~~g~p~~~v~g~gt~LDs~R~~~  152 (306)
T cd05291          73 VITAGAPQKPGETRLDLLEKNAKIMKSIVPKIKASGFDGIFLVASNPVDVITYVVQKLSGLPKNRVIGTGTSLDTARLRR  152 (306)
T ss_pred             EEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecChHHHHHHHHHHHhCcCHHHEeeccchHHHHHHHH
Confidence            9999875322    3556778888888888888877654444444 10         0 1100000111100  112223


Q ss_pred             HHHHhCCCcEEEEeeCeeecCCCCC
Q 023205          189 ELLTRYPYGGVILRPGFIYGTRTVG  213 (286)
Q Consensus       189 ~~~~~~g~~~~ilRp~~v~g~~~~~  213 (286)
                      ++.+..+++..-++. +++|.....
T Consensus       153 ~la~~l~v~~~~v~~-~V~G~Hg~s  176 (306)
T cd05291         153 ALAEKLNVDPRSVHA-YVLGEHGDS  176 (306)
T ss_pred             HHHHHHCCCcccceE-EEEecCCCc
Confidence            344567788777885 788886443

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>PRK00048 dihydrodipicolinate reductase; Provisional

Probab=97.73  E-value=0.00037  Score=58.50  Aligned_cols=68  Identities=16%  Similarity=0.219  Sum_probs=46.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHC-CCeEEEEe-cCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEcccc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDR-GLTVASLS-RSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG  131 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~-g~~V~~l~-R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~  131 (286)
                      +++|.|+|++|.+|+.+++.+.+. +.++.++. ++++... ..       -..++...++++++++++|+||.+..+
T Consensus         1 ~mkV~IiG~~G~mG~~i~~~l~~~~~~elvav~d~~~~~~~-~~-------~~~~i~~~~dl~~ll~~~DvVid~t~p   70 (257)
T PRK00048          1 MIKVAVAGASGRMGRELIEAVEAAEDLELVAAVDRPGSPLV-GQ-------GALGVAITDDLEAVLADADVLIDFTTP   70 (257)
T ss_pred             CcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCcccc-cc-------CCCCccccCCHHHhccCCCEEEECCCH
Confidence            368999999999999999998875 57777654 4433211 11       122333345567777789999998754

>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form

Probab=97.71  E-value=0.00024  Score=62.26  Aligned_cols=96  Identities=16%  Similarity=0.187  Sum_probs=57.4

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHC-CCeEEEE-ecCCCc--ccccccCCceeEE-eccCCCHhHHHHHhcCCCEEEEcccc
Q 023205           57 EKLLVLGGNGFVGSHICREALDR-GLTVASL-SRSGRS--SLRDSWANNVIWH-QGNLLSSDSWKEALDGVTAVISCVGG  131 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~-g~~V~~l-~R~~~~--~~~~~~~~~~~~i-~~Dl~d~~~~~~~~~~~d~vi~~a~~  131 (286)
                      ++|.|.||||++|..+++.|.+. ..+++.+ +++.+.  ..... .+.+... ..++.+ .+.+++.+++|+||.|.+.
T Consensus         1 ~kVaIiGATG~vG~ellr~L~~hP~~el~~l~~s~~sagk~~~~~-~~~l~~~~~~~~~~-~~~~~~~~~~DvVf~alP~   78 (346)
T TIGR01850         1 IKVAIVGASGYTGGELLRLLLNHPEVEITYLVSSRESAGKPVSEV-HPHLRGLVDLNLEP-IDEEEIAEDADVVFLALPH   78 (346)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCceEEEEeccchhcCCChHHh-CccccccCCceeec-CCHHHhhcCCCEEEECCCc
Confidence            47999999999999999999987 4677754 443321  11110 1111111 111221 1233444689999999754


Q ss_pred             CCCcchhhhhhhHHHHHHHHHHHHcCCCEEEEEecC
Q 023205          132 FGSNSYMYKINGTANINAIRAASEKGVKRFVYISAA  167 (286)
Q Consensus       132 ~~~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~  167 (286)
                      .            ....++..+.+.| +++|=.|+.
T Consensus        79 ~------------~s~~~~~~~~~~G-~~VIDlS~~  101 (346)
T TIGR01850        79 G------------VSAELAPELLAAG-VKVIDLSAD  101 (346)
T ss_pred             h------------HHHHHHHHHHhCC-CEEEeCChh
Confidence            2            2345566666677 478888873

This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=97.70  E-value=0.00035  Score=50.98  Aligned_cols=70  Identities=17%  Similarity=0.314  Sum_probs=54.7

Q ss_pred             EEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHH-hcCCCEEEEccc
Q 023205           59 LLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEA-LDGVTAVISCVG  130 (286)
Q Consensus        59 VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~-~~~~d~vi~~a~  130 (286)
                      |+|.|. |.+|..+++.|.+.+.+|+++++++... ......++.++.||.+|++.++++ +++++.|+-+..
T Consensus         1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~~-~~~~~~~~~~i~gd~~~~~~l~~a~i~~a~~vv~~~~   71 (116)
T PF02254_consen    1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPERV-EELREEGVEVIYGDATDPEVLERAGIEKADAVVILTD   71 (116)
T ss_dssp             EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHH-HHHHHTTSEEEES-TTSHHHHHHTTGGCESEEEEESS
T ss_pred             eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcHHH-HHHHhcccccccccchhhhHHhhcCccccCEEEEccC
Confidence            678887 8999999999999777999999987552 222234689999999999999875 567898888754

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases

Probab=97.70  E-value=0.00041  Score=59.65  Aligned_cols=155  Identities=15%  Similarity=0.043  Sum_probs=92.3

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCC--CeEEEEecCCCcccccccC---CceeEEeccCCCHhHHHHHhcCCCEEEEcccc
Q 023205           57 EKLLVLGGNGFVGSHICREALDRG--LTVASLSRSGRSSLRDSWA---NNVIWHQGNLLSSDSWKEALDGVTAVISCVGG  131 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g--~~V~~l~R~~~~~~~~~~~---~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~  131 (286)
                      +||.|+|++|.+|++++-.|..++  .++.+++.+..........   ....+....  ..+++.+.++++|+||.+||.
T Consensus         1 ~KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~~a~g~alDL~~~~~~~~i~~~~--~~~~~y~~~~daDivvitaG~   78 (310)
T cd01337           1 VKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIVNTPGVAADLSHINTPAKVTGYL--GPEELKKALKGADVVVIPAGV   78 (310)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecCccceeehHhHhCCCcceEEEec--CCCchHHhcCCCCEEEEeCCC
Confidence            489999999999999999998887  4888888871111110011   112222110  113356788999999999997


Q ss_pred             CCCc----chhhhhhhHHHHHHHHHHHHcCCCEEEEEec-CC--------cC---CCCccc-cchHHH---HHHHHHHHH
Q 023205          132 FGSN----SYMYKINGTANINAIRAASEKGVKRFVYISA-AD--------FG---VANYLL-QGYYEG---KRAAETELL  191 (286)
Q Consensus       132 ~~~~----~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss-~~--------~~---~~~~~~-~~y~~s---K~~~E~~~~  191 (286)
                      ...+    .+.++.|......+++..++.+.+-++.+=| ..        |.   ....|. ...+..   -.....++.
T Consensus        79 ~~k~g~tR~dll~~N~~i~~~i~~~i~~~~p~a~vivvtNPvDv~~~i~t~~~~~~s~~p~~rviG~~~LDs~R~~~~la  158 (310)
T cd01337          79 PRKPGMTRDDLFNINAGIVRDLATAVAKACPKALILIISNPVNSTVPIAAEVLKKAGVYDPKRLFGVTTLDVVRANTFVA  158 (310)
T ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccCchhhHHHHHHHHHHHhcCCCHHHEEeeechHHHHHHHHHH
Confidence            5322    3566788888888888888887665554444 11        00   001110 011111   112233344


Q ss_pred             HhCCCcEEEEeeCeeecCC-CCCc
Q 023205          192 TRYPYGGVILRPGFIYGTR-TVGG  214 (286)
Q Consensus       192 ~~~g~~~~ilRp~~v~g~~-~~~~  214 (286)
                      +..|++..-++ ++++|.+ ....
T Consensus       159 ~~l~v~~~~V~-~~v~GeHsGds~  181 (310)
T cd01337         159 ELLGLDPAKVN-VPVIGGHSGVTI  181 (310)
T ss_pred             HHhCcCHHHEE-EEEEecCCCCce
Confidence            56777777777 7888877 4433

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR01759 MalateDH-SF1 malate dehydrogenase

Probab=97.69  E-value=0.00045  Score=59.79  Aligned_cols=159  Identities=12%  Similarity=0.025  Sum_probs=91.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC-------eEEEEecCCCc--ccccc--cCCceeEEeccCCCHhHHHHHhcCCCE
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGL-------TVASLSRSGRS--SLRDS--WANNVIWHQGNLLSSDSWKEALDGVTA  124 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~-------~V~~l~R~~~~--~~~~~--~~~~~~~i~~Dl~d~~~~~~~~~~~d~  124 (286)
                      +.||.|+|++|++|++++-.|+.++.       ++.+++.....  ...+.  ..........+..-.....+.++++|+
T Consensus         3 p~KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~~~~~~~~~daDv   82 (323)
T TIGR01759         3 PVRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLLAGVVATTDPEEAFKDVDA   82 (323)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhccccccCCcEEecChHHHhCCCCE
Confidence            45899999999999999999998873       78888886422  11100  000000000011001123467889999


Q ss_pred             EEEccccCCC----cchhhhhhhHHHHHHHHHHHHcCC-CEEEEEec-CC----c---CCC-Ccc-ccchHHHHHH---H
Q 023205          125 VISCVGGFGS----NSYMYKINGTANINAIRAASEKGV-KRFVYISA-AD----F---GVA-NYL-LQGYYEGKRA---A  186 (286)
Q Consensus       125 vi~~a~~~~~----~~~~~~~~~~~~~~l~~~a~~~~v-~~~v~~Ss-~~----~---~~~-~~~-~~~y~~sK~~---~  186 (286)
                      ||.+||....    ..+.+..|......+++.+++... +-++.+-| .+    |   ... ..| ....+.+...   .
T Consensus        83 VVitAG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvsNPvDv~t~v~~k~s~g~p~~rViG~t~LDs~R~  162 (323)
T TIGR01759        83 ALLVGAFPRKPGMERADLLSKNGKIFKEQGKALNKVAKKDVKVLVVGNPANTNALIASKNAPDIPPKNFSAMTRLDHNRA  162 (323)
T ss_pred             EEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeCCcHHHHHHHHHHHcCCCCHHHEEEeeHHHHHHH
Confidence            9999997532    235667888888888998888875 55555544 10    0   000 111 0011111111   1


Q ss_pred             HHHHHHhCCCcEEEEeeCeeecCCCCCc
Q 023205          187 ETELLTRYPYGGVILRPGFIYGTRTVGG  214 (286)
Q Consensus       187 E~~~~~~~g~~~~ilRp~~v~g~~~~~~  214 (286)
                      ..++.+..+++..-++-..++|......
T Consensus       163 r~~la~~l~v~~~~V~~~~V~GeHG~s~  190 (323)
T TIGR01759       163 KYQLAAKAGVPVSDVKNVIIWGNHSNTQ  190 (323)
T ss_pred             HHHHHHHhCcChHHeEEeEEEecCCCce
Confidence            2234456788888887777888765433

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.69  E-value=0.00018  Score=65.50  Aligned_cols=74  Identities=20%  Similarity=0.205  Sum_probs=55.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc----cccCCceeEEeccCCCHhHHHHHhcCCCEEEEcccc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR----DSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG  131 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~----~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~  131 (286)
                      .++|+|+|+++ +|..+++.|++.|++|++.+++......    .....+++++.+|..+     ..+.++|+||++++.
T Consensus         5 ~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~~~~~~~~~~~~~-----~~~~~~d~vv~~~g~   78 (450)
T PRK14106          5 GKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGELGIELVLGEYPE-----EFLEGVDLVVVSPGV   78 (450)
T ss_pred             CCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCEEEeCCcch-----hHhhcCCEEEECCCC
Confidence            57899999866 9999999999999999999987533221    1112367888888765     345679999999986


Q ss_pred             CCCc
Q 023205          132 FGSN  135 (286)
Q Consensus       132 ~~~~  135 (286)
                      ....
T Consensus        79 ~~~~   82 (450)
T PRK14106         79 PLDS   82 (450)
T ss_pred             CCCC
Confidence            5443

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=97.65  E-value=9.6e-05  Score=54.78  Aligned_cols=95  Identities=18%  Similarity=0.269  Sum_probs=55.6

Q ss_pred             CeEEEEcCCChhHHHHHHHHHH-CCCeEEEE-ecCCCcccccccC--CceeEEeccCCCHhHHHHHhcCCCEEEEccccC
Q 023205           57 EKLLVLGGNGFVGSHICREALD-RGLTVASL-SRSGRSSLRDSWA--NNVIWHQGNLLSSDSWKEALDGVTAVISCVGGF  132 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~-~g~~V~~l-~R~~~~~~~~~~~--~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~~  132 (286)
                      ++|+|.|++|.+|+.+++.+.+ .++++.+. +|+++....+...  .+..  ...+.-.++++++++.+|+||.+..+ 
T Consensus         1 mrV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~--~~~~~v~~~l~~~~~~~DVvIDfT~p-   77 (124)
T PF01113_consen    1 MRVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIG--PLGVPVTDDLEELLEEADVVIDFTNP-   77 (124)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSS--T-SSBEBS-HHHHTTH-SEEEEES-H-
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcC--CcccccchhHHHhcccCCEEEEcCCh-
Confidence            4899999999999999999999 46776554 4554222111100  0000  01111125577888889999998522 


Q ss_pred             CCcchhhhhhhHHHHHHHHHHHHcCCCEEEEEec
Q 023205          133 GSNSYMYKINGTANINAIRAASEKGVKRFVYISA  166 (286)
Q Consensus       133 ~~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss  166 (286)
                                 ......++.|.+++++ +|.-+|
T Consensus        78 -----------~~~~~~~~~~~~~g~~-~ViGTT   99 (124)
T PF01113_consen   78 -----------DAVYDNLEYALKHGVP-LVIGTT   99 (124)
T ss_dssp             -----------HHHHHHHHHHHHHT-E-EEEE-S
T ss_pred             -----------HHhHHHHHHHHhCCCC-EEEECC
Confidence                       3445668888888863 444333

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent

Probab=97.64  E-value=0.00054  Score=59.00  Aligned_cols=107  Identities=15%  Similarity=0.192  Sum_probs=71.7

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC--eEEEEecCCCcccccccC---CceeEEeccCCCHhHHHHHhcCCCEEEEccccC
Q 023205           58 KLLVLGGNGFVGSHICREALDRGL--TVASLSRSGRSSLRDSWA---NNVIWHQGNLLSSDSWKEALDGVTAVISCVGGF  132 (286)
Q Consensus        58 ~VlVtGatG~iG~~l~~~Ll~~g~--~V~~l~R~~~~~~~~~~~---~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~~  132 (286)
                      ||.|+|++|.+|++++-.|+..+.  ++.++++++.........   ....+....  +.+++.+.++++|+||.+||..
T Consensus         1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~a~g~a~DL~~~~~~~~i~~~~--~~~~~~~~~~daDivvitaG~~   78 (312)
T TIGR01772         1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAGAAGVAADLSHIPTAASVKGFS--GEEGLENALKGADVVVIPAGVP   78 (312)
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCCCcEEEchhhcCCcCceEEEec--CCCchHHHcCCCCEEEEeCCCC
Confidence            589999999999999999988874  788898876221111111   112222101  1123567899999999999975


Q ss_pred             CCc----chhhhhhhHHHHHHHHHHHHcCCCEEEEEec
Q 023205          133 GSN----SYMYKINGTANINAIRAASEKGVKRFVYISA  166 (286)
Q Consensus       133 ~~~----~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss  166 (286)
                      ..+    .+.+..|..-...+.+...+.+.+-++.+-|
T Consensus        79 ~~~g~~R~dll~~N~~I~~~i~~~i~~~~p~~iiivvs  116 (312)
T TIGR01772        79 RKPGMTRDDLFNVNAGIVKDLVAAVAESCPKAMILVIT  116 (312)
T ss_pred             CCCCccHHHHHHHhHHHHHHHHHHHHHhCCCeEEEEec
Confidence            322    3556778888888888888887665555554

Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.

>PLN02383 aspartate semialdehyde dehydrogenase

Probab=97.62  E-value=0.00093  Score=58.40  Aligned_cols=68  Identities=19%  Similarity=0.346  Sum_probs=42.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC---eEEEEecCC--CcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGL---TVASLSRSG--RSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVG  130 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~---~V~~l~R~~--~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~  130 (286)
                      .++|.|.||||++|..+++.|.+++|   ++..+....  .+....   .+..+...++ ++    +.+.++|+||.+++
T Consensus         7 ~~kVaVvGAtG~vG~eLlrlL~~~~hP~~~l~~las~rsaGk~~~~---~~~~~~v~~~-~~----~~~~~~D~vf~a~p   78 (344)
T PLN02383          7 GPSVAIVGVTGAVGQEFLSVLTDRDFPYSSLKMLASARSAGKKVTF---EGRDYTVEEL-TE----DSFDGVDIALFSAG   78 (344)
T ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCCcceEEEEEccCCCCCeeee---cCceeEEEeC-CH----HHHcCCCEEEECCC
Confidence            46899999999999999999999776   444443332  221111   1222332233 22    23478999998875


Q ss_pred             c
Q 023205          131 G  131 (286)
Q Consensus       131 ~  131 (286)
                      .
T Consensus        79 ~   79 (344)
T PLN02383         79 G   79 (344)
T ss_pred             c
Confidence            4

>PRK08057 cobalt-precorrin-6x reductase; Reviewed

Probab=97.61  E-value=0.0016  Score=54.20  Aligned_cols=74  Identities=15%  Similarity=0.191  Sum_probs=59.3

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhc--CCCEEEEccccC
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD--GVTAVISCVGGF  132 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~--~~d~vi~~a~~~  132 (286)
                      |+++|||.|||+- |+.+++.|.+.|+.|++.+-.....   .....+.++.+-+.+.+.+.+.++  +++.||...-|+
T Consensus         1 ~~~~IlvlgGT~e-gr~la~~L~~~g~~v~~Svat~~g~---~~~~~~~v~~G~l~~~~~l~~~l~~~~i~~VIDATHPf   76 (248)
T PRK08057          1 MMPRILLLGGTSE-ARALARALAAAGVDIVLSLAGRTGG---PADLPGPVRVGGFGGAEGLAAYLREEGIDLVIDATHPY   76 (248)
T ss_pred             CCceEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCCC---cccCCceEEECCCCCHHHHHHHHHHCCCCEEEECCCcc
Confidence            4678999999877 9999999999999888766655332   123477888899889999999986  689999987654

>PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=97.60  E-value=0.00044  Score=60.77  Aligned_cols=36  Identities=25%  Similarity=0.352  Sum_probs=30.5

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCC
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSG   90 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~-~V~~l~R~~   90 (286)
                      |+++|+|+||||++|+.+++.|+++.. ++.++.++.
T Consensus         2 ~~~~V~I~GatG~iG~~l~~~L~~~p~~el~~~~~s~   38 (349)
T PRK08664          2 MKLKVGILGATGMVGQRFVQLLANHPWFEVTALAASE   38 (349)
T ss_pred             CCcEEEEECCCCHHHHHHHHHHHcCCCceEEEEEcCh
Confidence            357999999999999999999998764 888885554

>PRK05442 malate dehydrogenase; Provisional

Probab=97.59  E-value=0.0014  Score=56.91  Aligned_cols=151  Identities=11%  Similarity=0.043  Sum_probs=87.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC-------eEEEEecCCCc--ccccc--c-------CCceeEEeccCCCHhHHHH
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGL-------TVASLSRSGRS--SLRDS--W-------ANNVIWHQGNLLSSDSWKE  117 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~-------~V~~l~R~~~~--~~~~~--~-------~~~~~~i~~Dl~d~~~~~~  117 (286)
                      +++|.|+|++|.+|+.++-.|+..+.       ++.+++.++..  ...+.  .       ..++++.       ....+
T Consensus         4 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~i~-------~~~y~   76 (326)
T PRK05442          4 PVRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGVVIT-------DDPNV   76 (326)
T ss_pred             CcEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCcEEe-------cChHH
Confidence            56999999999999999999988662       68888885432  11100  0       0122211       12346


Q ss_pred             HhcCCCEEEEccccCCC----cchhhhhhhHHHHHHHHHHHHcC-CC-EEEEEecCC-------cCCC-Ccc-ccchHHH
Q 023205          118 ALDGVTAVISCVGGFGS----NSYMYKINGTANINAIRAASEKG-VK-RFVYISAAD-------FGVA-NYL-LQGYYEG  182 (286)
Q Consensus       118 ~~~~~d~vi~~a~~~~~----~~~~~~~~~~~~~~l~~~a~~~~-v~-~~v~~Ss~~-------~~~~-~~~-~~~y~~s  182 (286)
                      .++++|+||.+||....    ..+.++.|.....++.+..++.. .+ .++.+|-.+       +... ..| ....+.+
T Consensus        77 ~~~daDiVVitaG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvsNPvDv~t~v~~k~s~g~p~~rViG~t  156 (326)
T PRK05442         77 AFKDADVALLVGARPRGPGMERKDLLEANGAIFTAQGKALNEVAARDVKVLVVGNPANTNALIAMKNAPDLPAENFTAMT  156 (326)
T ss_pred             HhCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCCchHHHHHHHHHHcCCCCHHHEEeee
Confidence            78899999999996432    23556788888888888888844 34 444444310       0000 111 0011111


Q ss_pred             HH---HHHHHHHHhCCCcEEEEeeCeeecCCCCC
Q 023205          183 KR---AAETELLTRYPYGGVILRPGFIYGTRTVG  213 (286)
Q Consensus       183 K~---~~E~~~~~~~g~~~~ilRp~~v~g~~~~~  213 (286)
                      ..   ....++.+..+++..-++.-.++|.....
T Consensus       157 ~LDs~R~r~~la~~l~v~~~~V~~~vV~GeHG~s  190 (326)
T PRK05442        157 RLDHNRALSQLAAKAGVPVADIKKMTVWGNHSAT  190 (326)
T ss_pred             HHHHHHHHHHHHHHhCcChHHeEEeEEEECCcCc
Confidence            11   11223444677777777766667876543

>PLN00112 malate dehydrogenase (NADP); Provisional

Probab=97.55  E-value=0.0024  Score=57.42  Aligned_cols=151  Identities=12%  Similarity=0.023  Sum_probs=93.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHC-------CC--eEEEEecCCCccccccc---------CCceeEEeccCCCHhHHHH
Q 023205           56 SEKLLVLGGNGFVGSHICREALDR-------GL--TVASLSRSGRSSLRDSW---------ANNVIWHQGNLLSSDSWKE  117 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~-------g~--~V~~l~R~~~~~~~~~~---------~~~~~~i~~Dl~d~~~~~~  117 (286)
                      .-+|.|+|++|.+|.+++-.|+..       +.  +++.++++.+....+..         ..++.+..+   +    .+
T Consensus       100 ~~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~i~~~---~----ye  172 (444)
T PLN00112        100 LINVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVSIGID---P----YE  172 (444)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceEEecC---C----HH
Confidence            358999999999999999999988       53  78888887765321110         112221211   2    35


Q ss_pred             HhcCCCEEEEccccCCCc----chhhhhhhHHHHHHHHHHHH-cCCCEEEEEec-CC----------cCCCCcc-c--cc
Q 023205          118 ALDGVTAVISCVGGFGSN----SYMYKINGTANINAIRAASE-KGVKRFVYISA-AD----------FGVANYL-L--QG  178 (286)
Q Consensus       118 ~~~~~d~vi~~a~~~~~~----~~~~~~~~~~~~~l~~~a~~-~~v~~~v~~Ss-~~----------~~~~~~~-~--~~  178 (286)
                      .++++|+||..||....+    .+.++.|......+.+...+ ++..-+|.+-| -.          .+..... .  ..
T Consensus       173 ~~kdaDiVVitAG~prkpG~tR~dLl~~N~~I~k~i~~~I~~~a~p~~ivIVVsNPvDv~t~v~~k~sg~~~~rViGtgT  252 (444)
T PLN00112        173 VFQDAEWALLIGAKPRGPGMERADLLDINGQIFAEQGKALNEVASRNVKVIVVGNPCNTNALICLKNAPNIPAKNFHALT  252 (444)
T ss_pred             HhCcCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEcCCcHHHHHHHHHHHcCCCCcceEEeec
Confidence            688999999999975322    35667888888888888888 56554444444 10          0111100 0  00


Q ss_pred             hHHHHHHHHHHHHHhCCCcEEEEeeCeeecCCCCCc
Q 023205          179 YYEGKRAAETELLTRYPYGGVILRPGFIYGTRTVGG  214 (286)
Q Consensus       179 y~~sK~~~E~~~~~~~g~~~~ilRp~~v~g~~~~~~  214 (286)
                      .-. -...-.++.+..+++..-|.-.+|+|......
T Consensus       253 ~LD-saR~r~~LA~~l~V~~~~V~~~~V~GeHGdsq  287 (444)
T PLN00112        253 RLD-ENRAKCQLALKAGVFYDKVSNVTIWGNHSTTQ  287 (444)
T ss_pred             cHH-HHHHHHHHHHHhCcCHHHcccceEEecCCCce
Confidence            111 11122234556788888887778888765544

>PRK04148 hypothetical protein; Provisional

Probab=97.53  E-value=0.00063  Score=50.61  Aligned_cols=93  Identities=12%  Similarity=0.117  Sum_probs=68.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccccCCCc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFGSN  135 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~~~~~  135 (286)
                      .++|++.|. | -|.+++..|.+.|++|++++.++.. ........+.++.+|+.+++.  +..+++|.|+.+=.+    
T Consensus        17 ~~kileIG~-G-fG~~vA~~L~~~G~~ViaIDi~~~a-V~~a~~~~~~~v~dDlf~p~~--~~y~~a~liysirpp----   87 (134)
T PRK04148         17 NKKIVELGI-G-FYFKVAKKLKESGFDVIVIDINEKA-VEKAKKLGLNAFVDDLFNPNL--EIYKNAKLIYSIRPP----   87 (134)
T ss_pred             CCEEEEEEe-c-CCHHHHHHHHHCCCEEEEEECCHHH-HHHHHHhCCeEEECcCCCCCH--HHHhcCCEEEEeCCC----
Confidence            468999996 6 7899999999999999999998764 222223468999999998763  456789999987332    


Q ss_pred             chhhhhhhHHHHHHHHHHHHcCCCEEEEE
Q 023205          136 SYMYKINGTANINAIRAASEKGVKRFVYI  164 (286)
Q Consensus       136 ~~~~~~~~~~~~~l~~~a~~~~v~~~v~~  164 (286)
                      .+       -...+++.|++.++.-+|..
T Consensus        88 ~e-------l~~~~~~la~~~~~~~~i~~  109 (134)
T PRK04148         88 RD-------LQPFILELAKKINVPLIIKP  109 (134)
T ss_pred             HH-------HHHHHHHHHHHcCCCEEEEc
Confidence            22       22356888888888655543

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=97.50  E-value=0.0031  Score=54.54  Aligned_cols=103  Identities=13%  Similarity=0.215  Sum_probs=71.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC--eEEEEecCCCccccc------c--cCCceeEEeccCCCHhHHHHHhcCCCEE
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGL--TVASLSRSGRSSLRD------S--WANNVIWHQGNLLSSDSWKEALDGVTAV  125 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~--~V~~l~R~~~~~~~~------~--~~~~~~~i~~Dl~d~~~~~~~~~~~d~v  125 (286)
                      .+||.|+|+ |.+|..++..|+..+.  ++.+++++.+.....      .  ...++.+...   +   + +.++++|+|
T Consensus         6 ~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~~~---~---~-~~~~~adiv   77 (315)
T PRK00066          6 HNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIYAG---D---Y-SDCKDADLV   77 (315)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEEeC---C---H-HHhCCCCEE
Confidence            469999998 9999999999999885  899999876542110      0  0123333321   2   2 347899999


Q ss_pred             EEccccCCCc----chhhhhhhHHHHHHHHHHHHcCCCEEEEEec
Q 023205          126 ISCVGGFGSN----SYMYKINGTANINAIRAASEKGVKRFVYISA  166 (286)
Q Consensus       126 i~~a~~~~~~----~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss  166 (286)
                      |.++|....+    ...+..|......+++..++.+.+-++.+-|
T Consensus        78 Iitag~~~k~g~~R~dll~~N~~i~~~i~~~i~~~~~~~~vivvs  122 (315)
T PRK00066         78 VITAGAPQKPGETRLDLVEKNLKIFKSIVGEVMASGFDGIFLVAS  122 (315)
T ss_pred             EEecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence            9999975432    3556778888888888888877654444444

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=97.45  E-value=0.00099  Score=60.74  Aligned_cols=100  Identities=18%  Similarity=0.284  Sum_probs=70.5

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCccccc-ccCCceeEEeccCCCHhHHHH-HhcCCCEEEEccccC
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRD-SWANNVIWHQGNLLSSDSWKE-ALDGVTAVISCVGGF  132 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~-~~~~~~~~i~~Dl~d~~~~~~-~~~~~d~vi~~a~~~  132 (286)
                      .+++|+|.|+ |.+|+.+++.|.+.|++|++++++++..... ....++.++.+|.++++.+++ -++++|.||-+... 
T Consensus       230 ~~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~~~~~~~~i~gd~~~~~~L~~~~~~~a~~vi~~~~~-  307 (453)
T PRK09496        230 PVKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERAEELAEELPNTLVLHGDGTDQELLEEEGIDEADAFIALTND-  307 (453)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHCCCCeEEECCCCCHHHHHhcCCccCCEEEECCCC-
Confidence            3678999998 9999999999999999999999887642211 112467899999999998865 45789999866432 


Q ss_pred             CCcchhhhhhhHHHHHHHHHHHHcCCCEEEEEec
Q 023205          133 GSNSYMYKINGTANINAIRAASEKGVKRFVYISA  166 (286)
Q Consensus       133 ~~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss  166 (286)
                        .    ..|..    +...+++.+.++++....
T Consensus       308 --~----~~n~~----~~~~~~~~~~~~ii~~~~  331 (453)
T PRK09496        308 --D----EANIL----SSLLAKRLGAKKVIALVN  331 (453)
T ss_pred             --c----HHHHH----HHHHHHHhCCCeEEEEEC
Confidence              1    22222    233455667666665444

>COG4982 3-oxoacyl-[acyl-carrier protein]

Probab=97.44  E-value=0.0085  Score=55.06  Aligned_cols=156  Identities=16%  Similarity=0.115  Sum_probs=96.2

Q ss_pred             CCCeEEEEcCC-ChhHHHHHHHHHHCCCeEEEEecCCCcccc----------cccCCceeEEeccCCCHhHHHHHhc---
Q 023205           55 PSEKLLVLGGN-GFVGSHICREALDRGLTVASLSRSGRSSLR----------DSWANNVIWHQGNLLSSDSWKEALD---  120 (286)
Q Consensus        55 ~~~~VlVtGat-G~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~----------~~~~~~~~~i~~Dl~d~~~~~~~~~---  120 (286)
                      ..+..|||||+ |.||..++..||+.|..|++.+.+-++...          ......+-++..++....+++.+++   
T Consensus       395 ~d~valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~s~~r~efyr~LYa~~a~~ga~LwvVpaN~~SysDVdAlIewIg  474 (866)
T COG4982         395 GDKVALVTGASKGSIAAAVVARLLAGGATVIATTSRLSEERTEFYRSLYARHARYGAALWVVPANMGSYSDVDALIEWIG  474 (866)
T ss_pred             ccceEEEecCCCcchHHHHHHHHHhCCcEEEEEcccccHHHHHHHHHHHHhhCCCCceEEEEeccccchhhHHHHHHHhc
Confidence            45678999998 999999999999999999998877554211          1123456677778877766666653   


Q ss_pred             ------------------CCCEEEEccccCCCc---------chhhhhhhHHHHHHHHHHHHcC----CC---EEEEEec
Q 023205          121 ------------------GVTAVISCVGGFGSN---------SYMYKINGTANINAIRAASEKG----VK---RFVYISA  166 (286)
Q Consensus       121 ------------------~~d~vi~~a~~~~~~---------~~~~~~~~~~~~~l~~~a~~~~----v~---~~v~~Ss  166 (286)
                                        ..|.+|-+|++....         ...+++-......++-..++.+    +.   |+|+-.|
T Consensus       475 ~eq~~t~g~~s~~~k~a~~ptll~PFAAp~v~G~l~~agsraE~~~rilLw~V~Rliggl~~~~s~r~v~~R~hVVLPgS  554 (866)
T COG4982         475 DEQTETVGPQSIHIKLAWTPTLLFPFAAPRVSGELADAGSRAEFAMRILLWNVLRLIGGLKKQGSSRGVDTRLHVVLPGS  554 (866)
T ss_pred             cccccccCCcceecccccCcceeeecccCCccCccccCCchHHHHHHHHHHHHHHHHHHhhhhccccCcccceEEEecCC
Confidence                              126677777654211         1122333444444444444432    21   6777777


Q ss_pred             CCcCCCCccccchHHHHHHHHHHHHH---hC----CCcEEEEeeCeeecCCC
Q 023205          167 ADFGVANYLLQGYYEGKRAAETELLT---RY----PYGGVILRPGFIYGTRT  211 (286)
Q Consensus       167 ~~~~~~~~~~~~y~~sK~~~E~~~~~---~~----g~~~~ilRp~~v~g~~~  211 (286)
                      .+-|.-. ....|+.+|...|.++.+   .+    -+.++=-++||+-|.+.
T Consensus       555 PNrG~FG-gDGaYgEsK~aldav~~RW~sEs~Wa~~vsl~~A~IGWtrGTGL  605 (866)
T COG4982         555 PNRGMFG-GDGAYGESKLALDAVVNRWHSESSWAARVSLAHALIGWTRGTGL  605 (866)
T ss_pred             CCCCccC-CCcchhhHHHHHHHHHHHhhccchhhHHHHHhhhheeeeccccc
Confidence            5433321 235699999999997754   11    13344456677666544

>PRK11863 N-acetyl-gamma-glutamyl-phosphate reductase; Provisional

Probab=97.39  E-value=0.0015  Score=56.10  Aligned_cols=81  Identities=20%  Similarity=0.265  Sum_probs=53.7

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccccCC
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFG  133 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~~~  133 (286)
                      |+.+|.|.||||++|..+++.|.++.+ ++..+..+...               |+.+   .+..+.++|+||.+.+.. 
T Consensus         1 ~~~~VaIvGAtGy~G~eLlrlL~~hp~~~l~~~~s~~~~---------------~~~~---~~~~~~~~DvvFlalp~~-   61 (313)
T PRK11863          1 MKPKVFIDGEAGTTGLQIRERLAGRSDIELLSIPEAKRK---------------DAAA---RRELLNAADVAILCLPDD-   61 (313)
T ss_pred             CCcEEEEECCCCHHHHHHHHHHhcCCCeEEEEEecCCCC---------------cccC---chhhhcCCCEEEECCCHH-
Confidence            467999999999999999999998874 66666544322               1111   224567899999886431 


Q ss_pred             CcchhhhhhhHHHHHHHHHHHHcCCCEEEEEec
Q 023205          134 SNSYMYKINGTANINAIRAASEKGVKRFVYISA  166 (286)
Q Consensus       134 ~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss  166 (286)
                                 ....++..+.+.|+ ++|=.|+
T Consensus        62 -----------~s~~~~~~~~~~g~-~VIDlSa   82 (313)
T PRK11863         62 -----------AAREAVALIDNPAT-RVIDAST   82 (313)
T ss_pred             -----------HHHHHHHHHHhCCC-EEEECCh
Confidence                       12234555555665 5777776

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=97.34  E-value=0.00025  Score=54.61  Aligned_cols=74  Identities=15%  Similarity=0.085  Sum_probs=49.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCC-CeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccccCC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRG-LTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFG  133 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g-~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~~~  133 (286)
                      .++|+|+|+ |.+|..+++.|.+.| ++|.+.+|+.++.......-+...+..+..+   ..++++++|+||.+.+...
T Consensus        19 ~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dvvi~~~~~~~   93 (155)
T cd01065          19 GKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAYLD---LEELLAEADLIINTTPVGM   93 (155)
T ss_pred             CCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceeecc---hhhccccCCEEEeCcCCCC
Confidence            568999997 999999999999986 7899999986542211100011111223333   3344789999999987654

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=97.34  E-value=0.00038  Score=52.41  Aligned_cols=72  Identities=18%  Similarity=0.266  Sum_probs=51.4

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCe-EEEEecCCCcccc--ccc-CCceeEEeccCCCHhHHHHHhcCCCEEEEccc
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLT-VASLSRSGRSSLR--DSW-ANNVIWHQGNLLSSDSWKEALDGVTAVISCVG  130 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~-V~~l~R~~~~~~~--~~~-~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~  130 (286)
                      ..++|+|.|+ |..|+.++..|.+.|.+ |++++|+.++...  +.. ...++++.  +   +++.+.+.++|+||++.+
T Consensus        11 ~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~--~---~~~~~~~~~~DivI~aT~   84 (135)
T PF01488_consen   11 KGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIP--L---EDLEEALQEADIVINATP   84 (135)
T ss_dssp             TTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEE--G---GGHCHHHHTESEEEE-SS
T ss_pred             CCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceee--H---HHHHHHHhhCCeEEEecC
Confidence            4679999997 99999999999999975 9999998765321  111 22344443  2   335577888999999976


Q ss_pred             cC
Q 023205          131 GF  132 (286)
Q Consensus       131 ~~  132 (286)
                      ..
T Consensus        85 ~~   86 (135)
T PF01488_consen   85 SG   86 (135)
T ss_dssp             TT
T ss_pred             CC
Confidence            54

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]

Probab=97.33  E-value=0.0022  Score=54.81  Aligned_cols=103  Identities=17%  Similarity=0.183  Sum_probs=72.3

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCC--CeEEEEecCCCcccccc--cC-------CceeEEeccCCCHhHHHHHhcCCCEE
Q 023205           57 EKLLVLGGNGFVGSHICREALDRG--LTVASLSRSGRSSLRDS--WA-------NNVIWHQGNLLSSDSWKEALDGVTAV  125 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g--~~V~~l~R~~~~~~~~~--~~-------~~~~~i~~Dl~d~~~~~~~~~~~d~v  125 (286)
                      +||.|+|+ |+||+.++-.|+.++  .++.+++...+......  ..       .. ..+.+| .+    .+.++++|+|
T Consensus         1 ~KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~-~~i~~~-~~----y~~~~~aDiV   73 (313)
T COG0039           1 MKVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSD-VKITGD-GD----YEDLKGADIV   73 (313)
T ss_pred             CeEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhccCc-eEEecC-CC----hhhhcCCCEE
Confidence            47999999 999999999998876  38999998844321110  00       11 112222 11    4567899999


Q ss_pred             EEccccCCCc----chhhhhhhHHHHHHHHHHHHcCCCEEEEEec
Q 023205          126 ISCVGGFGSN----SYMYKINGTANINAIRAASEKGVKRFVYISA  166 (286)
Q Consensus       126 i~~a~~~~~~----~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss  166 (286)
                      +-.||....+    .+.++.|......+.+...+.+.+-++++-|
T Consensus        74 vitAG~prKpGmtR~DLl~~Na~I~~~i~~~i~~~~~d~ivlVvt  118 (313)
T COG0039          74 VITAGVPRKPGMTRLDLLEKNAKIVKDIAKAIAKYAPDAIVLVVT  118 (313)
T ss_pred             EEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhCCCeEEEEec
Confidence            9999876433    3567888888888888888888776666666

>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=97.32  E-value=0.00055  Score=59.15  Aligned_cols=36  Identities=14%  Similarity=0.205  Sum_probs=32.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRS   92 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~   92 (286)
                      +++|.|+| +|.+|..++..|+++|++|++.+|++..
T Consensus         2 ~~~V~VIG-~G~mG~~iA~~la~~G~~V~v~d~~~~~   37 (308)
T PRK06129          2 MGSVAIIG-AGLIGRAWAIVFARAGHEVRLWDADPAA   37 (308)
T ss_pred             CcEEEEEC-ccHHHHHHHHHHHHCCCeeEEEeCCHHH
Confidence            35899999 6999999999999999999999998643

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=97.28  E-value=0.0059  Score=51.49  Aligned_cols=153  Identities=13%  Similarity=0.058  Sum_probs=88.1

Q ss_pred             EEEEcCCChhHHHHHHHHHHCC----CeEEEEecCCCcccccc--cCCceeE-EeccCCCHhHHHHHhcCCCEEEEcccc
Q 023205           59 LLVLGGNGFVGSHICREALDRG----LTVASLSRSGRSSLRDS--WANNVIW-HQGNLLSSDSWKEALDGVTAVISCVGG  131 (286)
Q Consensus        59 VlVtGatG~iG~~l~~~Ll~~g----~~V~~l~R~~~~~~~~~--~~~~~~~-i~~Dl~d~~~~~~~~~~~d~vi~~a~~  131 (286)
                      |.|+||+|.+|..++..|+..+    .+|.+++++++......  ...-... ....+.-.++..+.++++|.||.+++.
T Consensus         1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~~~~~i~~~~d~~~~~~~aDiVv~t~~~   80 (263)
T cd00650           1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPLADIKVSITDDPYEAFKDADVVIITAGV   80 (263)
T ss_pred             CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhccCcEEEECCchHHHhCCCCEEEECCCC
Confidence            5799999999999999999988    68999998775422100  0000000 011111123356778999999999987


Q ss_pred             CCCc----chhhhhhhHHHHHHHHHHHHcCCCEEEEEec-CC---------c-CCCCccccchH-HHHHHHHHHHHHhCC
Q 023205          132 FGSN----SYMYKINGTANINAIRAASEKGVKRFVYISA-AD---------F-GVANYLLQGYY-EGKRAAETELLTRYP  195 (286)
Q Consensus       132 ~~~~----~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss-~~---------~-~~~~~~~~~y~-~sK~~~E~~~~~~~g  195 (286)
                      ...+    ......|......+++..++...+-++.+-| ..         + +.+....-+.+ ..-......+.+..+
T Consensus        81 ~~~~g~~r~~~~~~n~~i~~~i~~~i~~~~p~a~~i~~tNP~d~~t~~~~~~sg~~~~kviG~~~ld~~r~~~~la~~l~  160 (263)
T cd00650          81 GRKPGMGRLDLLKRNVPIVKEIGDNIEKYSPDAWIIVVSNPVDIITYLVWRYSGLPKEKVIGLGTLDPIRFRRILAEKLG  160 (263)
T ss_pred             CCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHHHHHHHHHHHhCCCchhEEEeecchHHHHHHHHHHHhC
Confidence            5432    2344566667777788887776554444434 10         0 11111111222 111122233445677


Q ss_pred             CcEEEEeeCeeecCCCC
Q 023205          196 YGGVILRPGFIYGTRTV  212 (286)
Q Consensus       196 ~~~~ilRp~~v~g~~~~  212 (286)
                      ++..-++ +.++|....
T Consensus       161 v~~~~v~-~~v~G~hg~  176 (263)
T cd00650         161 VDPDDVK-VYILGEHGG  176 (263)
T ss_pred             CCccceE-EEEEEcCCC
Confidence            7777888 788887543

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>PTZ00082 L-lactate dehydrogenase; Provisional

Probab=97.27  E-value=0.0089  Score=51.87  Aligned_cols=104  Identities=13%  Similarity=0.120  Sum_probs=68.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCCCcccccc---------cCCceeEEeccCCCHhHHHHHhcCCCEE
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSLRDS---------WANNVIWHQGNLLSSDSWKEALDGVTAV  125 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~~~~---------~~~~~~~i~~Dl~d~~~~~~~~~~~d~v  125 (286)
                      ++||.|+|+ |.+|..++..++..|. +|++++.+++....+.         .....++...  .|   + +.++++|+|
T Consensus         6 ~~KI~IIGa-G~vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~~~--~d---~-~~l~~aDiV   78 (321)
T PTZ00082          6 RRKISLIGS-GNIGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHSNVIAGSNSKVIGT--NN---Y-EDIAGSDVV   78 (321)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhhhhccCCCeEEEEC--CC---H-HHhCCCCEE
Confidence            468999995 9999999999998885 8999998876421110         0112222210  12   3 367899999


Q ss_pred             EEccccCCCcc---------hhhhhhhHHHHHHHHHHHHcCCC-EEEEEec
Q 023205          126 ISCVGGFGSNS---------YMYKINGTANINAIRAASEKGVK-RFVYISA  166 (286)
Q Consensus       126 i~~a~~~~~~~---------~~~~~~~~~~~~l~~~a~~~~v~-~~v~~Ss  166 (286)
                      |.+++....+.         .....|......+++...+...+ .++.+|-
T Consensus        79 I~tag~~~~~~~~~~~~~r~~~l~~n~~i~~~i~~~i~~~~p~a~~iv~sN  129 (321)
T PTZ00082         79 IVTAGLTKRPGKSDKEWNRDDLLPLNAKIMDEVAEGIKKYCPNAFVIVITN  129 (321)
T ss_pred             EECCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence            99998653221         23455666666777777777765 4555553

>PTZ00117 malate dehydrogenase; Provisional

Probab=97.27  E-value=0.0023  Score=55.46  Aligned_cols=104  Identities=13%  Similarity=0.217  Sum_probs=69.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCC-CeEEEEecCCCccccccc---------CCceeEEeccCCCHhHHHHHhcCCCEE
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRG-LTVASLSRSGRSSLRDSW---------ANNVIWHQGNLLSSDSWKEALDGVTAV  125 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g-~~V~~l~R~~~~~~~~~~---------~~~~~~i~~Dl~d~~~~~~~~~~~d~v  125 (286)
                      .++|.|+|| |.+|..++..|...| .++.+++++++.......         .....+ .+    ..+++ .++++|+|
T Consensus         5 ~~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~~~i-~~----~~d~~-~l~~ADiV   77 (319)
T PTZ00117          5 RKKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKHFSTLVGSNINI-LG----TNNYE-DIKDSDVV   77 (319)
T ss_pred             CcEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhhhccccCCCeEE-Ee----CCCHH-HhCCCCEE
Confidence            568999997 999999999998888 688899987654211100         001111 11    12344 67999999


Q ss_pred             EEccccCCCc----chhhhhhhHHHHHHHHHHHHcCCCE-EEEEec
Q 023205          126 ISCVGGFGSN----SYMYKINGTANINAIRAASEKGVKR-FVYISA  166 (286)
Q Consensus       126 i~~a~~~~~~----~~~~~~~~~~~~~l~~~a~~~~v~~-~v~~Ss  166 (286)
                      |.+++....+    ......|......+++...+...+. ++++|-
T Consensus        78 Vitag~~~~~g~~r~dll~~n~~i~~~i~~~i~~~~p~a~vivvsN  123 (319)
T PTZ00117         78 VITAGVQRKEEMTREDLLTINGKIMKSVAESVKKYCPNAFVICVTN  123 (319)
T ss_pred             EECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence            9999875433    2445566666677788887777665 555553

>KOG1494 consensus NAD-dependent malate dehydrogenase [Energy production and conversion]

Probab=97.25  E-value=0.0022  Score=53.10  Aligned_cols=108  Identities=19%  Similarity=0.192  Sum_probs=70.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEe---cCCCccc-c--cccCCceeEEeccCCCHhHHHHHhcCCCEEEEcc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLS---RSGRSSL-R--DSWANNVIWHQGNLLSSDSWKEALDGVTAVISCV  129 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~---R~~~~~~-~--~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a  129 (286)
                      .-+|.|.||.|.||+.|. .|++....|.-|.   -...+-. .  .....+..  ...++-++.++++++++|+|+.-|
T Consensus        28 ~~KVAvlGAaGGIGQPLS-LLlK~np~Vs~LaLYDi~~~~GVaaDlSHI~T~s~--V~g~~g~~~L~~al~~advVvIPA  104 (345)
T KOG1494|consen   28 GLKVAVLGAAGGIGQPLS-LLLKLNPLVSELALYDIANTPGVAADLSHINTNSS--VVGFTGADGLENALKGADVVVIPA  104 (345)
T ss_pred             cceEEEEecCCccCccHH-HHHhcCcccceeeeeecccCCcccccccccCCCCc--eeccCChhHHHHHhcCCCEEEecC
Confidence            458999999999999995 4555554443222   2211100 0  00111111  223344678999999999999999


Q ss_pred             ccCCCc----chhhhhhhHHHHHHHHHHHHcCCC-EEEEEec
Q 023205          130 GGFGSN----SYMYKINGTANINAIRAASEKGVK-RFVYISA  166 (286)
Q Consensus       130 ~~~~~~----~~~~~~~~~~~~~l~~~a~~~~v~-~~v~~Ss  166 (286)
                      |....+    ++.|++|......+..++.+...+ ++.++|-
T Consensus       105 GVPRKPGMTRDDLFn~NAgIv~~l~~aia~~cP~A~i~vIsN  146 (345)
T KOG1494|consen  105 GVPRKPGMTRDDLFNINAGIVKTLAAAIAKCCPNALILVISN  146 (345)
T ss_pred             CCCCCCCCcHHHhhhcchHHHHHHHHHHHhhCccceeEeecC
Confidence            976543    578899999899999988887654 4455553

>PRK08040 putative semialdehyde dehydrogenase; Provisional

Probab=97.23  E-value=0.0024  Score=55.54  Aligned_cols=91  Identities=14%  Similarity=0.152  Sum_probs=52.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC---eEEEEecCCCccccccc-CCceeEEeccCCCHhHHHHHhcCCCEEEEcccc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGL---TVASLSRSGRSSLRDSW-ANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG  131 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~---~V~~l~R~~~~~~~~~~-~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~  131 (286)
                      .++|.|.||||++|..+++.|.++.|   ++..+..+.+.-..-.. ...+.+-  ++   +.  ..+.++|+||.+++.
T Consensus         4 ~~~vaIvGATG~vG~ellrlL~~~~hP~~~l~~laS~~saG~~~~~~~~~~~v~--~~---~~--~~~~~~Dvvf~a~p~   76 (336)
T PRK08040          4 GWNIALLGATGAVGEALLELLAERQFPVGELYALASEESAGETLRFGGKSVTVQ--DA---AE--FDWSQAQLAFFVAGR   76 (336)
T ss_pred             CCEEEEEccCCHHHHHHHHHHhcCCCCceEEEEEEccCcCCceEEECCcceEEE--eC---ch--hhccCCCEEEECCCH
Confidence            56899999999999999999998543   66666544322111101 1111111  22   11  234679999998754


Q ss_pred             CCCcchhhhhhhHHHHHHHHHHHHcCCCEEEEEec
Q 023205          132 FGSNSYMYKINGTANINAIRAASEKGVKRFVYISA  166 (286)
Q Consensus       132 ~~~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss  166 (286)
                      .            ....++..+.+.|+ ++|=.|+
T Consensus        77 ~------------~s~~~~~~~~~~g~-~VIDlS~   98 (336)
T PRK08040         77 E------------ASAAYAEEATNAGC-LVIDSSG   98 (336)
T ss_pred             H------------HHHHHHHHHHHCCC-EEEECCh
Confidence            1            12234444545555 4666665

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=97.22  E-value=0.0042  Score=54.26  Aligned_cols=97  Identities=11%  Similarity=0.216  Sum_probs=65.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCCCcc--c---------------c---------cccCC--ceeEEe
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSS--L---------------R---------DSWAN--NVIWHQ  106 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~--~---------------~---------~~~~~--~~~~i~  106 (286)
                      .++|+|.|+ |.+|+++++.|...|. ++++++++.-+.  .               .         ....+  +++.+.
T Consensus        24 ~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i~~~~  102 (338)
T PRK12475         24 EKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEIVPVV  102 (338)
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEEEEEe
Confidence            568999997 8899999999999996 888888874110  0               0         00112  455666


Q ss_pred             ccCCCHhHHHHHhcCCCEEEEccccCCCcchhhhhhhHHHHHHHHHHHHcCCCEEEEEec
Q 023205          107 GNLLSSDSWKEALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISA  166 (286)
Q Consensus       107 ~Dl~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss  166 (286)
                      .|++ .+.++++++++|+||.+...   ..        ....+-+.|.+.+++ +|+.+.
T Consensus       103 ~~~~-~~~~~~~~~~~DlVid~~D~---~~--------~r~~in~~~~~~~ip-~i~~~~  149 (338)
T PRK12475        103 TDVT-VEELEELVKEVDLIIDATDN---FD--------TRLLINDLSQKYNIP-WIYGGC  149 (338)
T ss_pred             ccCC-HHHHHHHhcCCCEEEEcCCC---HH--------HHHHHHHHHHHcCCC-EEEEEe
Confidence            6774 56788889999999998522   11        112345677777764 666554

>COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism]

Probab=97.21  E-value=0.0023  Score=54.93  Aligned_cols=98  Identities=16%  Similarity=0.179  Sum_probs=57.0

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCC-CeEEEEecCCC-cccccccCCcee-EEeccC--CCHhHHHHHhcCCCEEEEcc
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRG-LTVASLSRSGR-SSLRDSWANNVI-WHQGNL--LSSDSWKEALDGVTAVISCV  129 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g-~~V~~l~R~~~-~~~~~~~~~~~~-~i~~Dl--~d~~~~~~~~~~~d~vi~~a  129 (286)
                      +|++|.|.||+|+.|..|++.|..+. .++...+.+.. ...-....++.. .+...+  .|.+.+  ..++||+||.+.
T Consensus         1 ~~~kV~IvGasGYtG~EL~rlL~~Hp~ve~~~~ss~~~~g~~~~~~~p~l~g~~~l~~~~~~~~~~--~~~~~DvvFlal   78 (349)
T COG0002           1 MMIKVGIVGASGYTGLELLRLLAGHPDVELILISSRERAGKPVSDVHPNLRGLVDLPFQTIDPEKI--ELDECDVVFLAL   78 (349)
T ss_pred             CCceEEEEcCCCCcHHHHHHHHhcCCCeEEEEeechhhcCCchHHhCcccccccccccccCChhhh--hcccCCEEEEec
Confidence            46799999999999999999999986 47666655442 211111112222 111111  123322  456799999986


Q ss_pred             ccCCCcchhhhhhhHHHHHHHHHHHHcCCCEEEEEecC
Q 023205          130 GGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAA  167 (286)
Q Consensus       130 ~~~~~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~  167 (286)
                      ...            ....++......+++ +|=+|..
T Consensus        79 Phg------------~s~~~v~~l~~~g~~-VIDLSad  103 (349)
T COG0002          79 PHG------------VSAELVPELLEAGCK-VIDLSAD  103 (349)
T ss_pred             Cch------------hHHHHHHHHHhCCCe-EEECCcc
Confidence            431            112345555555664 7777763

>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases

Probab=97.19  E-value=0.011  Score=51.00  Aligned_cols=148  Identities=14%  Similarity=0.169  Sum_probs=91.8

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC--eEEEEecCCCccccc--------ccC--CceeEEeccCCCHhHHHHHhcCCCEE
Q 023205           58 KLLVLGGNGFVGSHICREALDRGL--TVASLSRSGRSSLRD--------SWA--NNVIWHQGNLLSSDSWKEALDGVTAV  125 (286)
Q Consensus        58 ~VlVtGatG~iG~~l~~~Ll~~g~--~V~~l~R~~~~~~~~--------~~~--~~~~~i~~Dl~d~~~~~~~~~~~d~v  125 (286)
                      ||.|.|+ |.+|..++..|+.++.  ++.+++.+.+....+        ...  .++++..+|       .+.++++|+|
T Consensus         1 Ki~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~~~-------y~~~~~aDiv   72 (307)
T cd05290           1 KLVVIGA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRAGD-------YDDCADADII   72 (307)
T ss_pred             CEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEECC-------HHHhCCCCEE
Confidence            5889998 9999999999998874  799999876542111        001  134444333       3568899999


Q ss_pred             EEccccCCCc------chhhhhhhHHHHHHHHHHHHcCCCEEEEEec-C----C------cCCCCccccch--HHHHHHH
Q 023205          126 ISCVGGFGSN------SYMYKINGTANINAIRAASEKGVKRFVYISA-A----D------FGVANYLLQGY--YEGKRAA  186 (286)
Q Consensus       126 i~~a~~~~~~------~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss-~----~------~~~~~~~~~~y--~~sK~~~  186 (286)
                      |.+||....+      .+.+..|......+++...+.+.+-++.+-| .    .      .|.+..-.-+-  ...-...
T Consensus        73 vitaG~~~kpg~tr~R~dll~~N~~I~~~i~~~i~~~~p~~i~ivvsNPvDv~t~~~~k~sg~p~~rviG~gt~LDs~R~  152 (307)
T cd05290          73 VITAGPSIDPGNTDDRLDLAQTNAKIIREIMGNITKVTKEAVIILITNPLDIAVYIAATEFDYPANKVIGTGTMLDTARL  152 (307)
T ss_pred             EECCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecCcHHHHHHHHHHHhCcChhheecccchHHHHHH
Confidence            9999975322      4556788888888899998888766666665 1    0      01111000000  0111122


Q ss_pred             HHHHHHhCCCcEEEEeeCeeecCCCCCc
Q 023205          187 ETELLTRYPYGGVILRPGFIYGTRTVGG  214 (286)
Q Consensus       187 E~~~~~~~g~~~~ilRp~~v~g~~~~~~  214 (286)
                      ..++.+..+++..-++. +++|.+....
T Consensus       153 ~~~la~~l~v~~~~V~~-~ViGeHGds~  179 (307)
T cd05290         153 RRIVADKYGVDPKNVTG-YVLGEHGSHA  179 (307)
T ss_pred             HHHHHHHhCCCcccEEE-EEEecCCCce
Confidence            23344567888888875 5888765433

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=97.17  E-value=0.0019  Score=50.38  Aligned_cols=57  Identities=26%  Similarity=0.330  Sum_probs=47.7

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccccC
Q 023205           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGF  132 (286)
Q Consensus        54 ~~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~~  132 (286)
                      ...++|+|.|+++.+|..+++.|.++|.+|+++.|+.                      +++.+.+.++|+||.+.+..
T Consensus        42 l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~----------------------~~l~~~l~~aDiVIsat~~~   98 (168)
T cd01080          42 LAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKT----------------------KNLKEHTKQADIVIVAVGKP   98 (168)
T ss_pred             CCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCc----------------------hhHHHHHhhCCEEEEcCCCC
Confidence            4468999999966789999999999999999988862                      34667888999999997664

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=97.14  E-value=0.0059  Score=53.37  Aligned_cols=97  Identities=16%  Similarity=0.271  Sum_probs=65.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCCCcc-------------c----c---------cccCC--ceeEEe
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSS-------------L----R---------DSWAN--NVIWHQ  106 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~-------------~----~---------~~~~~--~~~~i~  106 (286)
                      ..+|+|.|+ |.+|+++++.|...|. ++++++++.-+.             .    .         ....+  .++.+.
T Consensus        24 ~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v~v~~~~  102 (339)
T PRK07688         24 EKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDVRVEAIV  102 (339)
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCcEEEEEe
Confidence            568999997 9999999999999996 899988874110             0    0         00112  355566


Q ss_pred             ccCCCHhHHHHHhcCCCEEEEccccCCCcchhhhhhhHHHHHHHHHHHHcCCCEEEEEec
Q 023205          107 GNLLSSDSWKEALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISA  166 (286)
Q Consensus       107 ~Dl~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss  166 (286)
                      .+++ .+.+.++++++|+||.+...           ......+-++|.+.++ .+|+.++
T Consensus       103 ~~~~-~~~~~~~~~~~DlVid~~Dn-----------~~~r~~ln~~~~~~~i-P~i~~~~  149 (339)
T PRK07688        103 QDVT-AEELEELVTGVDLIIDATDN-----------FETRFIVNDAAQKYGI-PWIYGAC  149 (339)
T ss_pred             ccCC-HHHHHHHHcCCCEEEEcCCC-----------HHHHHHHHHHHHHhCC-CEEEEee
Confidence            6664 46677889999999998431           1122245677877776 4666664

>PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=97.09  E-value=0.005  Score=54.05  Aligned_cols=71  Identities=21%  Similarity=0.336  Sum_probs=42.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHC-CCe---EEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEcccc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDR-GLT---VASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG  131 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~-g~~---V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~  131 (286)
                      |++|.|.||||++|..+++.|+++ .+.   ++.+............. +-.....++.+.+.    +.++|+||.+++.
T Consensus         1 m~~VAIVGATG~vG~ell~llL~~~~f~~~~l~~~ss~~sg~~~~~f~-g~~~~v~~~~~~~~----~~~~Divf~a~~~   75 (369)
T PRK06598          1 MKKVGFVGWRGMVGSVLMQRMVEENDFDLIEPVFFSTSQAGGAAPSFG-GKEGTLQDAFDIDA----LKKLDIIITCQGG   75 (369)
T ss_pred             CeEEEEEeCCCHHHHHHHHHHHhCCCCCcCcEEEecchhhCCcccccC-CCcceEEecCChhH----hcCCCEEEECCCH
Confidence            368999999999999999977766 444   66655542221111111 11112223333332    4679999998754

>PRK06019 phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed

Probab=97.07  E-value=0.0035  Score=55.68  Aligned_cols=68  Identities=15%  Similarity=0.156  Sum_probs=54.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEE
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVIS  127 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~  127 (286)
                      |++|+|.|+ |.+|+.++..+.+.|++|++++.+++......   .-..+.+|+.|.+.+.++.+.+|+|..
T Consensus         2 ~~~igilG~-Gql~~ml~~aa~~lG~~v~~~d~~~~~pa~~~---ad~~~~~~~~D~~~l~~~a~~~dvit~   69 (372)
T PRK06019          2 MKTIGIIGG-GQLGRMLALAAAPLGYKVIVLDPDPDSPAAQV---ADEVIVADYDDVAALRELAEQCDVITY   69 (372)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCCCCchhHh---CceEEecCCCCHHHHHHHHhcCCEEEe
Confidence            568999998 89999999999999999999998765422211   124566899999999999999998754

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=97.07  E-value=0.018  Score=43.19  Aligned_cols=96  Identities=19%  Similarity=0.302  Sum_probs=64.5

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCCCccc---------c---------------cccCC--ceeEEeccC
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSL---------R---------------DSWAN--NVIWHQGNL  109 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~---------~---------------~~~~~--~~~~i~~Dl  109 (286)
                      ++|+|.|+ |.+|+.+++.|...|. ++++++.+.-...         .               ....+  +++.+..++
T Consensus         3 ~~v~iiG~-G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~~   81 (135)
T PF00899_consen    3 KRVLIIGA-GGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEKI   81 (135)
T ss_dssp             -EEEEEST-SHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESHC
T ss_pred             CEEEEECc-CHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeeccc
Confidence            58999996 9999999999999996 7888887632110         0               00122  455566666


Q ss_pred             CCHhHHHHHhcCCCEEEEccccCCCcchhhhhhhHHHHHHHHHHHHcCCCEEEEEec
Q 023205          110 LSSDSWKEALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISA  166 (286)
Q Consensus       110 ~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss  166 (286)
                       +.+...+.++++|+||.+...           ......+-+.|++.+. .+|+.+.
T Consensus        82 -~~~~~~~~~~~~d~vi~~~d~-----------~~~~~~l~~~~~~~~~-p~i~~~~  125 (135)
T PF00899_consen   82 -DEENIEELLKDYDIVIDCVDS-----------LAARLLLNEICREYGI-PFIDAGV  125 (135)
T ss_dssp             -SHHHHHHHHHTSSEEEEESSS-----------HHHHHHHHHHHHHTT--EEEEEEE
T ss_pred             -ccccccccccCCCEEEEecCC-----------HHHHHHHHHHHHHcCC-CEEEEEe
Confidence             556778888999999998533           1222345668888876 5777765

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>PRK06223 malate dehydrogenase; Reviewed

Probab=97.07  E-value=0.0045  Score=53.47  Aligned_cols=108  Identities=13%  Similarity=0.187  Sum_probs=65.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCCCccccccc--CCceeE--EeccCCCHhHHHHHhcCCCEEEEccc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSLRDSW--ANNVIW--HQGNLLSSDSWKEALDGVTAVISCVG  130 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~~~~~--~~~~~~--i~~Dl~d~~~~~~~~~~~d~vi~~a~  130 (286)
                      |++|.|+|+ |.+|..++..+...|. +|++++++++.......  ......  ....+....++ +.++++|+||.+++
T Consensus         2 ~~KI~VIGa-G~vG~~ia~~la~~~~~ev~L~D~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~d~-~~~~~aDiVii~~~   79 (307)
T PRK06223          2 RKKISIIGA-GNVGATLAHLLALKELGDVVLFDIVEGVPQGKALDIAEAAPVEGFDTKITGTNDY-EDIAGSDVVVITAG   79 (307)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEEECCCchhHHHHHHHHhhhhhcCCCcEEEeCCCH-HHHCCCCEEEECCC
Confidence            579999998 9999999999998875 99999997654211100  000000  00111111123 35789999999987


Q ss_pred             cCCCcc----hhhhhhhHHHHHHHHHHHHcCCCE-EEEEe
Q 023205          131 GFGSNS----YMYKINGTANINAIRAASEKGVKR-FVYIS  165 (286)
Q Consensus       131 ~~~~~~----~~~~~~~~~~~~l~~~a~~~~v~~-~v~~S  165 (286)
                      ....+.    +...-|......+++...+...+. +|.+|
T Consensus        80 ~p~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~viv~t  119 (307)
T PRK06223         80 VPRKPGMSRDDLLGINAKIMKDVAEGIKKYAPDAIVIVVT  119 (307)
T ss_pred             CCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            643221    233456666666677776665544 55554

>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional

Probab=97.05  E-value=0.0019  Score=57.32  Aligned_cols=56  Identities=21%  Similarity=0.284  Sum_probs=46.1

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEcccc
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG  131 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~  131 (286)
                      .+++|.|.||.|.+|..+++.|.+.|++|++.+|+..                     +..++++.++|+||.|...
T Consensus        97 ~~~~I~IiGG~GlmG~slA~~l~~~G~~V~~~d~~~~---------------------~~~~~~~~~aDlVilavP~  152 (374)
T PRK11199         97 DLRPVVIVGGKGQLGRLFAKMLTLSGYQVRILEQDDW---------------------DRAEDILADAGMVIVSVPI  152 (374)
T ss_pred             ccceEEEEcCCChhhHHHHHHHHHCCCeEEEeCCCcc---------------------hhHHHHHhcCCEEEEeCcH
Confidence            4578999999999999999999999999999998521                     1234567789999998754

>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional

Probab=97.04  E-value=0.0031  Score=59.57  Aligned_cols=72  Identities=14%  Similarity=0.140  Sum_probs=59.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHH-hcCCCEEEEcc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEA-LDGVTAVISCV  129 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~-~~~~d~vi~~a  129 (286)
                      .++|+|.|. |.+|+.+++.|.++|+++++++.+++... .....+..++.||.+|++.++++ ++++|.++-+.
T Consensus       400 ~~~vII~G~-Gr~G~~va~~L~~~g~~vvvID~d~~~v~-~~~~~g~~v~~GDat~~~~L~~agi~~A~~vv~~~  472 (601)
T PRK03659        400 KPQVIIVGF-GRFGQVIGRLLMANKMRITVLERDISAVN-LMRKYGYKVYYGDATQLELLRAAGAEKAEAIVITC  472 (601)
T ss_pred             cCCEEEecC-chHHHHHHHHHHhCCCCEEEEECCHHHHH-HHHhCCCeEEEeeCCCHHHHHhcCCccCCEEEEEe
Confidence            457999995 99999999999999999999999876532 22235788999999999998876 57899988774

>TIGR01851 argC_other N-acetyl-gamma-glutamyl-phosphate reductase, uncommon form

Probab=97.04  E-value=0.005  Score=52.65  Aligned_cols=78  Identities=18%  Similarity=0.238  Sum_probs=51.1

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccccCCCcc
Q 023205           58 KLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFGSNS  136 (286)
Q Consensus        58 ~VlVtGatG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~~~~~~  136 (286)
                      +|.|.|++|+.|..+++.|..+.+ ++..+.-+..               .+   +.+.+++++++|+||.+.+..    
T Consensus         3 ~v~IvGasGy~G~el~rlL~~HP~~el~~l~s~~~---------------~~---~~~~~~~~~~~D~vFlalp~~----   60 (310)
T TIGR01851         3 KVFIDGEAGTTGLQIRERLSGRDDIELLSIAPDRR---------------KD---AAERAKLLNAADVAILCLPDD----   60 (310)
T ss_pred             eEEEECCCChhHHHHHHHHhCCCCeEEEEEecccc---------------cC---cCCHhHhhcCCCEEEECCCHH----
Confidence            799999999999999999999863 6666653321               11   112345667899999886431    


Q ss_pred             hhhhhhhHHHHHHHHHHHHcCCCEEEEEec
Q 023205          137 YMYKINGTANINAIRAASEKGVKRFVYISA  166 (286)
Q Consensus       137 ~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss  166 (286)
                              ....++..+.+.|+ ++|=.|+
T Consensus        61 --------~s~~~~~~~~~~g~-~VIDlSa   81 (310)
T TIGR01851        61 --------AAREAVSLVDNPNT-CIIDAST   81 (310)
T ss_pred             --------HHHHHHHHHHhCCC-EEEECCh
Confidence                    12234445545565 5777776

This model represents the less common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and gap architecture in a multiple sequence alignment.

>TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms)

Probab=97.04  E-value=0.007  Score=53.07  Aligned_cols=33  Identities=24%  Similarity=0.428  Sum_probs=28.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCC-CeEEEEecC
Q 023205           57 EKLLVLGGNGFVGSHICREALDRG-LTVASLSRS   89 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g-~~V~~l~R~   89 (286)
                      ++|.|+|++|++|+++++.|.+++ .++..+.++
T Consensus         1 ~kVaIvGatG~~G~~L~~~l~~~~~~~l~~v~~~   34 (341)
T TIGR00978         1 MRVAVLGATGLVGQKFVKLLAKHPYFELAKVVAS   34 (341)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCceEEEEEEC
Confidence            479999999999999999998876 588877544

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan.

>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt

Probab=97.03  E-value=0.01  Score=49.43  Aligned_cols=74  Identities=26%  Similarity=0.322  Sum_probs=54.8

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCc-ccccccCCceeEEeccCCCHhHHHHHhc--CCCEEEEccccC
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRS-SLRDSWANNVIWHQGNLLSSDSWKEALD--GVTAVISCVGGF  132 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~-~~~~~~~~~~~~i~~Dl~d~~~~~~~~~--~~d~vi~~a~~~  132 (286)
                      |+|||.|||+- |+.+++.|.++|+ |++-+-..-. ...........++.+-+.+.+.+.+.++  +++.||...-|+
T Consensus         1 m~ILvlgGTtE-~r~la~~L~~~g~-v~~sv~t~~g~~~~~~~~~~~~v~~G~lg~~~~l~~~l~~~~i~~vIDATHPf   77 (249)
T PF02571_consen    1 MKILVLGGTTE-GRKLAERLAEAGY-VIVSVATSYGGELLKPELPGLEVRVGRLGDEEGLAEFLRENGIDAVIDATHPF   77 (249)
T ss_pred             CEEEEEechHH-HHHHHHHHHhcCC-EEEEEEhhhhHhhhccccCCceEEECCCCCHHHHHHHHHhCCCcEEEECCCch
Confidence            68999999877 9999999999998 5543332211 1111222467888999989999999985  799999987654

Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process

>PF08732 HIM1: HIM1; InterPro: IPR014843 HIM1 (high induction of mutagenesis protein 1) plays a role in the control of spontaneous and induced mutagenesis []

Probab=97.03  E-value=0.0021  Score=55.90  Aligned_cols=93  Identities=24%  Similarity=0.334  Sum_probs=68.4

Q ss_pred             HhcCCCEEEEccccCCCc-----chhhhhhhHHHHHHHHHHH----HcCCCEEEEEecCCcCCCC-ccccchHHHHHHHH
Q 023205          118 ALDGVTAVISCVGGFGSN-----SYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVAN-YLLQGYYEGKRAAE  187 (286)
Q Consensus       118 ~~~~~d~vi~~a~~~~~~-----~~~~~~~~~~~~~l~~~a~----~~~v~~~v~~Ss~~~~~~~-~~~~~y~~sK~~~E  187 (286)
                      .+.+++.+|.+.|.....     .....++..-+..++++..    +.+.|++|.++|.  +... ....+|...|...|
T Consensus       200 ~l~~i~t~is~LGsts~~a~~s~~~~~~IDy~Lnl~laq~f~~~~~~~~~K~~vIvTSf--n~~~~s~~f~Yfk~K~~LE  277 (410)
T PF08732_consen  200 SLDDIKTMISTLGSTSAQAKSSKAARHKIDYQLNLDLAQTFANDIKNTGNKKLVIVTSF--NNNAISSMFPYFKTKGELE  277 (410)
T ss_pred             chhhhhhheecCCCChhhccccccchhhccccccHHHHHHhhhhhccCCCceEEEEEec--CcchhhhhhhhhHHHHHHH
Confidence            344678899998876422     2333566777777888877    6778999999994  3322 34568999999999


Q ss_pred             HHHHHhC---CCcEEEEeeCeeecCCCC
Q 023205          188 TELLTRY---PYGGVILRPGFIYGTRTV  212 (286)
Q Consensus       188 ~~~~~~~---g~~~~ilRp~~v~g~~~~  212 (286)
                      .-+....   --..+|+|||.+.|....
T Consensus       278 ~dl~~~l~~~l~~lvILRPGplvG~h~~  305 (410)
T PF08732_consen  278 NDLQNLLPPKLKHLVILRPGPLVGEHGS  305 (410)
T ss_pred             HHHHhhcccccceEEEecCccccCCCCC
Confidence            9887632   247899999999998775

It is thought to participate in the control of processing of mutational intermediates appearing during error-prone bypass of DNA damage.

>PRK10669 putative cation:proton antiport protein; Provisional

Probab=97.02  E-value=0.0017  Score=60.91  Aligned_cols=72  Identities=19%  Similarity=0.229  Sum_probs=59.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHH-hcCCCEEEEcc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEA-LDGVTAVISCV  129 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~-~~~~d~vi~~a  129 (286)
                      ..+|+|.|. |.+|++++++|.++|++|++++.++++.. .....+...+.+|.+|++.++++ ++++|.++-+.
T Consensus       417 ~~hiiI~G~-G~~G~~la~~L~~~g~~vvvId~d~~~~~-~~~~~g~~~i~GD~~~~~~L~~a~i~~a~~viv~~  489 (558)
T PRK10669        417 CNHALLVGY-GRVGSLLGEKLLAAGIPLVVIETSRTRVD-ELRERGIRAVLGNAANEEIMQLAHLDCARWLLLTI  489 (558)
T ss_pred             CCCEEEECC-ChHHHHHHHHHHHCCCCEEEEECCHHHHH-HHHHCCCeEEEcCCCCHHHHHhcCccccCEEEEEc
Confidence            468999996 99999999999999999999999876532 22245899999999999988865 46789887664

>COG0289 DapB Dihydrodipicolinate reductase [Amino acid transport and metabolism]

Probab=97.01  E-value=0.0071  Score=49.98  Aligned_cols=36  Identities=31%  Similarity=0.512  Sum_probs=29.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCC-CeE-EEEecCCC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRG-LTV-ASLSRSGR   91 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g-~~V-~~l~R~~~   91 (286)
                      +++|.|.|++|-+|+.+++.+.+.. .++ -++.|..+
T Consensus         2 ~iki~V~Ga~GRMG~~ii~~v~~~~~~~L~aa~~~~~~   39 (266)
T COG0289           2 MIKVAVAGASGRMGRTLIRAVLEAPDLELVAAFDRPGS   39 (266)
T ss_pred             CceEEEEcCCChHHHHHHHHHhcCCCceEEEEEecCCc
Confidence            6789999999999999999999886 454 44555544

>COG1004 Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane]

Probab=97.01  E-value=0.0032  Score=54.99  Aligned_cols=107  Identities=17%  Similarity=0.131  Sum_probs=64.5

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc------cccCCcee-EEecc-----CCCHhHHHHHhcCCCE
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVI-WHQGN-----LLSSDSWKEALDGVTA  124 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~------~~~~~~~~-~i~~D-----l~d~~~~~~~~~~~d~  124 (286)
                      |+|.|.| +||+|-.....|.+.||+|+|++-++++-..      ....++++ +++-+     +.-..+++++++++|+
T Consensus         1 MkI~viG-tGYVGLv~g~~lA~~GHeVv~vDid~~KV~~ln~g~~PI~EpgLe~ll~~~~~~gRl~fTtd~~~a~~~adv   79 (414)
T COG1004           1 MKITVIG-TGYVGLVTGACLAELGHEVVCVDIDESKVELLNKGISPIYEPGLEELLKENLASGRLRFTTDYEEAVKDADV   79 (414)
T ss_pred             CceEEEC-CchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHhCCCCCCcCccHHHHHHhccccCcEEEEcCHHHHHhcCCE
Confidence            5899999 6999999999999999999999998765211      01111111 01101     2112457778899999


Q ss_pred             EEEccccCCCcchhhhhhhHHHHHHHHHHHHcCCC-EEEEEec
Q 023205          125 VISCVGGFGSNSYMYKINGTANINAIRAASEKGVK-RFVYISA  166 (286)
Q Consensus       125 vi~~a~~~~~~~~~~~~~~~~~~~l~~~a~~~~v~-~~v~~Ss  166 (286)
                      +|-+.|......  -..+......+++...+...+ ++|.+=|
T Consensus        80 ~fIavgTP~~~d--g~aDl~~V~ava~~i~~~~~~~~vvV~KS  120 (414)
T COG1004          80 VFIAVGTPPDED--GSADLSYVEAVAKDIGEILDGKAVVVIKS  120 (414)
T ss_pred             EEEEcCCCCCCC--CCccHHHHHHHHHHHHhhcCCCeEEEEcC
Confidence            999988654332  223334444445544443322 4554444

>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]

Probab=97.01  E-value=0.0019  Score=51.68  Aligned_cols=66  Identities=20%  Similarity=0.197  Sum_probs=43.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc---cccCCceeEEeccCCCHhHHHHHhcCCCEEEEccc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR---DSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVG  130 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~---~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~  130 (286)
                      ||++.|.| +|.||+.+++.|.+.||+|+.-+|+.++...   +...+.  +      ...+..++.+.+|+||....
T Consensus         1 m~~~~i~G-tGniG~alA~~~a~ag~eV~igs~r~~~~~~a~a~~l~~~--i------~~~~~~dA~~~aDVVvLAVP   69 (211)
T COG2085           1 MMIIAIIG-TGNIGSALALRLAKAGHEVIIGSSRGPKALAAAAAALGPL--I------TGGSNEDAAALADVVVLAVP   69 (211)
T ss_pred             CcEEEEec-cChHHHHHHHHHHhCCCeEEEecCCChhHHHHHHHhhccc--c------ccCChHHHHhcCCEEEEecc
Confidence            35566655 7999999999999999999999877665322   111111  1      12234456677888887653

>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases

Probab=97.00  E-value=0.0052  Score=53.05  Aligned_cols=148  Identities=16%  Similarity=0.143  Sum_probs=86.9

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCC--CeEEEEecCCCcccc------cc--cCCceeEEeccCCCHhHHHHHhcCCCEEE
Q 023205           57 EKLLVLGGNGFVGSHICREALDRG--LTVASLSRSGRSSLR------DS--WANNVIWHQGNLLSSDSWKEALDGVTAVI  126 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g--~~V~~l~R~~~~~~~------~~--~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi  126 (286)
                      |+|.|.|+ |.+|..++..|+.+|  .+|.+++++.+....      ..  ......+...   |   + +.++++|+||
T Consensus         1 mkI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~i~~~---d---~-~~l~~aDiVi   72 (308)
T cd05292           1 MKVAIVGA-GFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRIYAG---D---Y-ADCKGADVVV   72 (308)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccCCeEEeeC---C---H-HHhCCCCEEE
Confidence            47999998 999999999999998  589999998654211      00  0012222211   2   2 3478999999


Q ss_pred             EccccCCCc----chhhhhhhHHHHHHHHHHHHcCCCEEEEEecC-C----------cCCCCccccchHH--HHHHHHHH
Q 023205          127 SCVGGFGSN----SYMYKINGTANINAIRAASEKGVKRFVYISAA-D----------FGVANYLLQGYYE--GKRAAETE  189 (286)
Q Consensus       127 ~~a~~~~~~----~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~-~----------~~~~~~~~~~y~~--sK~~~E~~  189 (286)
                      .+++....+    ......|......+++..++.+.+-++++-+- .          .|.+....-+.+.  .-.....+
T Consensus        73 ita~~~~~~~~~r~dl~~~n~~i~~~~~~~l~~~~~~giiiv~tNP~d~~~~~~~~~sg~p~~~viG~gt~LDs~R~~~~  152 (308)
T cd05292          73 ITAGANQKPGETRLDLLKRNVAIFKEIIPQILKYAPDAILLVVTNPVDVLTYVAYKLSGLPPNRVIGSGTVLDTARFRYL  152 (308)
T ss_pred             EccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHHHHHHHHHHHHCcCHHHeecccchhhHHHHHHH
Confidence            999875322    23445677777777887777765544444441 0          0100000011110  01223334


Q ss_pred             HHHhCCCcEEEEeeCeeecCCCCC
Q 023205          190 LLTRYPYGGVILRPGFIYGTRTVG  213 (286)
Q Consensus       190 ~~~~~g~~~~ilRp~~v~g~~~~~  213 (286)
                      +.+..+++..-++ ++++|.+...
T Consensus       153 la~~~~v~~~~v~-~~viGeHg~~  175 (308)
T cd05292         153 LGEHLGVDPRSVH-AYIIGEHGDS  175 (308)
T ss_pred             HHHHhCCCcccee-ceeeccCCCc
Confidence            5556788888887 5677876433

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases

Probab=96.99  E-value=0.019  Score=49.59  Aligned_cols=104  Identities=14%  Similarity=0.137  Sum_probs=68.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC--eEEEEecCCCcccccc--------cCCceeEEeccCCCHhHHHHHhcCCCEE
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGL--TVASLSRSGRSSLRDS--------WANNVIWHQGNLLSSDSWKEALDGVTAV  125 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~--~V~~l~R~~~~~~~~~--------~~~~~~~i~~Dl~d~~~~~~~~~~~d~v  125 (286)
                      .+||.|+|+ |.+|..++..|+..+.  ++.+++.+.+......        ......+...  .|   ++ .++++|+|
T Consensus         3 ~~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~~--~d---y~-~~~~adiv   75 (312)
T cd05293           3 RNKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEAD--KD---YS-VTANSKVV   75 (312)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEEC--CC---HH-HhCCCCEE
Confidence            458999996 9999999999998874  7899988765421100        0111223321  12   33 37899999


Q ss_pred             EEccccCCCc----chhhhhhhHHHHHHHHHHHHcCCCEEEEEec
Q 023205          126 ISCVGGFGSN----SYMYKINGTANINAIRAASEKGVKRFVYISA  166 (286)
Q Consensus       126 i~~a~~~~~~----~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss  166 (286)
                      |.++|....+    ...+..|..-...+++..++.+.+-++.+=|
T Consensus        76 vitaG~~~k~g~~R~dll~~N~~i~~~~~~~i~~~~p~~~vivvs  120 (312)
T cd05293          76 IVTAGARQNEGESRLDLVQRNVDIFKGIIPKLVKYSPNAILLVVS  120 (312)
T ss_pred             EECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEcc
Confidence            9999875432    2455777777778888888887654444433

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=96.94  E-value=0.001  Score=46.73  Aligned_cols=67  Identities=27%  Similarity=0.259  Sum_probs=44.6

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCC---CeEEEE-ecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEcccc
Q 023205           58 KLLVLGGNGFVGSHICREALDRG---LTVASL-SRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG  131 (286)
Q Consensus        58 ~VlVtGatG~iG~~l~~~Ll~~g---~~V~~l-~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~  131 (286)
                      ||.|.| +|.+|..+++.|++.|   ++|... +|++++.......-++.+...      +..++++.+|+||.+..+
T Consensus         1 kI~iIG-~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~~~~~~~~------~~~~~~~~advvilav~p   71 (96)
T PF03807_consen    1 KIGIIG-AGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEYGVQATAD------DNEEAAQEADVVILAVKP   71 (96)
T ss_dssp             EEEEES-TSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHCTTEEESE------EHHHHHHHTSEEEE-S-G
T ss_pred             CEEEEC-CCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhhccccccC------ChHHhhccCCEEEEEECH
Confidence            577886 6999999999999999   899955 887765322111112333322      245667789999999755

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>PRK08655 prephenate dehydrogenase; Provisional

Probab=96.93  E-value=0.0016  Score=59.05  Aligned_cols=68  Identities=21%  Similarity=0.252  Sum_probs=48.4

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEcccc
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG  131 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~  131 (286)
                      |+|+|+||+|.+|..+++.|.+.|++|++.+|+++.........++.+       ..+..+++.++|+||.+..+
T Consensus         1 MkI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~~~gv~~-------~~~~~e~~~~aDvVIlavp~   68 (437)
T PRK08655          1 MKISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVAKELGVEY-------ANDNIDAAKDADIVIISVPI   68 (437)
T ss_pred             CEEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHcCCee-------ccCHHHHhccCCEEEEecCH
Confidence            479999999999999999999999999999998654211111112211       12244567889999998754

>TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent

Probab=96.90  E-value=0.0089  Score=51.51  Aligned_cols=107  Identities=15%  Similarity=0.180  Sum_probs=66.3

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCCCccccccc---CCc-eeEEeccCCCHhHHHHHhcCCCEEEEcccc
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSLRDSW---ANN-VIWHQGNLLSSDSWKEALDGVTAVISCVGG  131 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~~~~~---~~~-~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~  131 (286)
                      ++|.|.|+ |++|..++..|+.+|+ +|++++...+.......   .+. .......+.-..++++ ++++|.||.++|.
T Consensus         2 ~KV~VIGa-G~vG~~iA~~la~~g~~~VvlvDi~~~l~~g~a~d~~~~~~~~~~~~~i~~t~d~~~-~~~aDiVIitag~   79 (305)
T TIGR01763         2 KKISVIGA-GFVGATTAFRLAEKELADLVLLDVVEGIPQGKALDMYEASPVGGFDTKVTGTNNYAD-TANSDIVVITAGL   79 (305)
T ss_pred             CEEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCCChhHHHHHhhhhhhhccCCCcEEEecCCHHH-hCCCCEEEEcCCC
Confidence            58999997 9999999999999886 89999986543211100   000 0000011111122333 6899999999986


Q ss_pred             CCCcc----hhhhhhhHHHHHHHHHHHHcCCCE-EEEEe
Q 023205          132 FGSNS----YMYKINGTANINAIRAASEKGVKR-FVYIS  165 (286)
Q Consensus       132 ~~~~~----~~~~~~~~~~~~l~~~a~~~~v~~-~v~~S  165 (286)
                      ...+.    ..+..|......+++...+.+.+. +|.+|
T Consensus        80 p~~~~~sR~~l~~~N~~iv~~i~~~I~~~~p~~~iIv~t  118 (305)
T TIGR01763        80 PRKPGMSREDLLSMNAGIVREVTGRIMEHSPNPIIVVVS  118 (305)
T ss_pred             CCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            54321    345677777778888877766443 44444

The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable.

>PRK06728 aspartate-semialdehyde dehydrogenase; Provisional

Probab=96.86  E-value=0.008  Score=52.41  Aligned_cols=69  Identities=20%  Similarity=0.310  Sum_probs=41.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHC-CCe---EEEEecCCCcccc-cccCCceeEEeccCCCHhHHHHHhcCCCEEEEccc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDR-GLT---VASLSRSGRSSLR-DSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVG  130 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~-g~~---V~~l~R~~~~~~~-~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~  130 (286)
                      .++|.|.||||++|..+++.|.++ .++   +..+....+.... ......+.+...   |++    .+.++|+||.+++
T Consensus         5 ~~~VaIvGATG~vG~ell~lL~~h~~f~v~~l~~~aS~~saGk~~~~~~~~l~v~~~---~~~----~~~~~Divf~a~~   77 (347)
T PRK06728          5 GYHVAVVGATGAVGQKIIELLEKETKFNIAEVTLLSSKRSAGKTVQFKGREIIIQEA---KIN----SFEGVDIAFFSAG   77 (347)
T ss_pred             CCEEEEEeCCCHHHHHHHHHHHHCCCCCcccEEEEECcccCCCCeeeCCcceEEEeC---CHH----HhcCCCEEEECCC
Confidence            358999999999999999999964 455   5555543222111 111112222222   333    2467999998875


Q ss_pred             c
Q 023205          131 G  131 (286)
Q Consensus       131 ~  131 (286)
                      .
T Consensus        78 ~   78 (347)
T PRK06728         78 G   78 (347)
T ss_pred             h
Confidence            3

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=96.85  E-value=0.0042  Score=60.92  Aligned_cols=151  Identities=20%  Similarity=0.223  Sum_probs=105.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCe-EEEEecCCCcc------cccccCCc--eeEEeccCCCHhHHHHHhcC-----
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLT-VASLSRSGRSS------LRDSWANN--VIWHQGNLLSSDSWKEALDG-----  121 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~-V~~l~R~~~~~------~~~~~~~~--~~~i~~Dl~d~~~~~~~~~~-----  121 (286)
                      -+..+|+||-|..|-.|++-|..+|.+ ++..+|+.-+.      .......+  +.+-..|++..+....+++.     
T Consensus      1768 eksYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGirtGYQa~~vrrWr~~GVqV~vsT~nitt~~ga~~Li~~s~kl~ 1847 (2376)
T KOG1202|consen 1768 EKSYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRTGYQALMVRRWRRRGVQVQVSTSNITTAEGARGLIEESNKLG 1847 (2376)
T ss_pred             cceEEEeccccchhHHHHHHHHhcCceEEEEeccccchhhHHHHHHHHHHhcCeEEEEecccchhhhhHHHHHHHhhhcc
Confidence            457999999999999999999999975 55555553321      01111223  33344566666666666654     


Q ss_pred             -CCEEEEccccCCC----------cchhhhhhhHHHHHHHHHHHHcC--CCEEEEEecCCcCCCCccccchHHHHHHHHH
Q 023205          122 -VTAVISCVGGFGS----------NSYMYKINGTANINAIRAASEKG--VKRFVYISAADFGVANYLLQGYYEGKRAAET  188 (286)
Q Consensus       122 -~d~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~~~~--v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~  188 (286)
                       +-.|||+|....+          .....++.+.++.|+=+..++.-  .+.||-.||..-|.-+.....||-+.-.+|+
T Consensus      1848 ~vGGiFnLA~VLRD~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~~LdyFv~FSSvscGRGN~GQtNYG~aNS~MER 1927 (2376)
T KOG1202|consen 1848 PVGGIFNLAAVLRDGLIENQTPKNFKDVAKPKYSGTINLDRVSREICPELDYFVVFSSVSCGRGNAGQTNYGLANSAMER 1927 (2376)
T ss_pred             cccchhhHHHHHHhhhhcccChhHHHhhhccceeeeeehhhhhhhhCcccceEEEEEeecccCCCCcccccchhhHHHHH
Confidence             5788998876421          12344677888999888887764  4688888887666666677789999999999


Q ss_pred             HHHH--hCCCcEEEEeeCee
Q 023205          189 ELLT--RYPYGGVILRPGFI  206 (286)
Q Consensus       189 ~~~~--~~g~~~~ilRp~~v  206 (286)
                      ++.+  ..|++-+.+.=|.+
T Consensus      1928 iceqRr~~GfPG~AiQWGAI 1947 (2376)
T KOG1202|consen 1928 ICEQRRHEGFPGTAIQWGAI 1947 (2376)
T ss_pred             HHHHhhhcCCCcceeeeecc
Confidence            8865  56777777775544

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.81  E-value=0.0063  Score=51.61  Aligned_cols=101  Identities=15%  Similarity=0.151  Sum_probs=69.0

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccccCCC
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFGS  134 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~~~~  134 (286)
                      +.+.|.|+|+.| +|+--++.-.+-|++|+++++...+.......-+.+.+..-..|++.++++.+--|.++|++.....
T Consensus       181 pG~~vgI~GlGG-LGh~aVq~AKAMG~rV~vis~~~~kkeea~~~LGAd~fv~~~~d~d~~~~~~~~~dg~~~~v~~~a~  259 (360)
T KOG0023|consen  181 PGKWVGIVGLGG-LGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSLGADVFVDSTEDPDIMKAIMKTTDGGIDTVSNLAE  259 (360)
T ss_pred             CCcEEEEecCcc-cchHHHHHHHHhCcEEEEEeCCchhHHHHHHhcCcceeEEecCCHHHHHHHHHhhcCcceeeeeccc
Confidence            467899999988 9999888888889999999998755333222235555544444888888888777888887654311


Q ss_pred             cchhhhhhhHHHHHHHHHHHHcCCCEEEEEecC
Q 023205          135 NSYMYKINGTANINAIRAASEKGVKRFVYISAA  167 (286)
Q Consensus       135 ~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~  167 (286)
                      ..         ...++..++..|  ++|+++-.
T Consensus       260 ~~---------~~~~~~~lk~~G--t~V~vg~p  281 (360)
T KOG0023|consen  260 HA---------LEPLLGLLKVNG--TLVLVGLP  281 (360)
T ss_pred             cc---------hHHHHHHhhcCC--EEEEEeCc
Confidence            11         113356666555  78988873

>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]

Probab=96.80  E-value=0.001  Score=52.85  Aligned_cols=74  Identities=20%  Similarity=0.291  Sum_probs=40.4

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEe-------------ccCCCHhHHHHHhcCCC
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQ-------------GNLLSSDSWKEALDGVT  123 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~-------------~Dl~d~~~~~~~~~~~d  123 (286)
                      |+|.|.| .|++|..++..|.+.|++|++++.+++.... .......+.+             +.+.-..+...+++.+|
T Consensus         1 M~I~ViG-lGyvGl~~A~~lA~~G~~V~g~D~~~~~v~~-l~~g~~p~~E~~l~~ll~~~~~~~~l~~t~~~~~ai~~ad   78 (185)
T PF03721_consen    1 MKIAVIG-LGYVGLPLAAALAEKGHQVIGVDIDEEKVEA-LNNGELPIYEPGLDELLKENVSAGRLRATTDIEEAIKDAD   78 (185)
T ss_dssp             -EEEEE---STTHHHHHHHHHHTTSEEEEE-S-HHHHHH-HHTTSSSS-CTTHHHHHHHHHHTTSEEEESEHHHHHHH-S
T ss_pred             CEEEEEC-CCcchHHHHHHHHhCCCEEEEEeCChHHHHH-Hhhccccccccchhhhhccccccccchhhhhhhhhhhccc
Confidence            6899998 5999999999999999999999998654211 0000000000             11111123455667789


Q ss_pred             EEEEccccC
Q 023205          124 AVISCVGGF  132 (286)
Q Consensus       124 ~vi~~a~~~  132 (286)
                      ++|-|.+..
T Consensus        79 v~~I~VpTP   87 (185)
T PF03721_consen   79 VVFICVPTP   87 (185)
T ss_dssp             EEEE----E
T ss_pred             eEEEecCCC
Confidence            999998753

The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=96.80  E-value=0.00081  Score=52.36  Aligned_cols=66  Identities=27%  Similarity=0.274  Sum_probs=45.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVG  130 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~  130 (286)
                      |++|.+.|- |-+|+.+++.|+++|++|++.+|++++..... ..+++..       ++..++.+++|+||-+..
T Consensus         1 m~~Ig~IGl-G~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~-~~g~~~~-------~s~~e~~~~~dvvi~~v~   66 (163)
T PF03446_consen    1 MMKIGFIGL-GNMGSAMARNLAKAGYEVTVYDRSPEKAEALA-EAGAEVA-------DSPAEAAEQADVVILCVP   66 (163)
T ss_dssp             -BEEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHH-HTTEEEE-------SSHHHHHHHBSEEEE-SS
T ss_pred             CCEEEEEch-HHHHHHHHHHHHhcCCeEEeeccchhhhhhhH-Hhhhhhh-------hhhhhHhhcccceEeecc
Confidence            578999995 99999999999999999999999875532211 1122222       235567778899998853

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=96.79  E-value=0.037  Score=44.59  Aligned_cols=71  Identities=10%  Similarity=0.123  Sum_probs=50.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC-eEEEEecC---CCccccc--------------------ccCC--ceeEEeccC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGL-TVASLSRS---GRSSLRD--------------------SWAN--NVIWHQGNL  109 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~-~V~~l~R~---~~~~~~~--------------------~~~~--~~~~i~~Dl  109 (286)
                      ..+|+|.|+ |.+|+.++..|...|. ++++.+++   .+....+                    ...+  +++.+..++
T Consensus        21 ~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~~iG~~Ka~~~~~~l~~inp~~~i~~~~~~i   99 (200)
T TIGR02354        21 QATVAICGL-GGLGSNVAINLARAGIGKLILVDFDVVEPSNLNRQQYKASQVGEPKTEALKENISEINPYTEIEAYDEKI   99 (200)
T ss_pred             CCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCEEcccccccccCChhhCCCHHHHHHHHHHHHHCCCCEEEEeeeeC
Confidence            568999997 8899999999999997 79988887   3221100                    0012  344555555


Q ss_pred             CCHhHHHHHhcCCCEEEEc
Q 023205          110 LSSDSWKEALDGVTAVISC  128 (286)
Q Consensus       110 ~d~~~~~~~~~~~d~vi~~  128 (286)
                      + .+.+.+.++++|+||-+
T Consensus       100 ~-~~~~~~~~~~~DlVi~a  117 (200)
T TIGR02354       100 T-EENIDKFFKDADIVCEA  117 (200)
T ss_pred             C-HhHHHHHhcCCCEEEEC
Confidence            3 56678888999999988

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>COG0026 PurK Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) [Nucleotide transport and metabolism]

Probab=96.79  E-value=0.0067  Score=52.51  Aligned_cols=68  Identities=15%  Similarity=0.171  Sum_probs=55.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEE
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVIS  127 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~  127 (286)
                      +++|.|.|+ |++|+-++.+-.+-|++|++++-+++......   .-..+.++..|++.+.++.+.||+|-.
T Consensus         1 ~~tvgIlGG-GQLgrMm~~aa~~lG~~v~vLdp~~~~PA~~v---a~~~i~~~~dD~~al~ela~~~DViT~   68 (375)
T COG0026           1 MKTVGILGG-GQLGRMMALAAARLGIKVIVLDPDADAPAAQV---ADRVIVAAYDDPEALRELAAKCDVITY   68 (375)
T ss_pred             CCeEEEEcC-cHHHHHHHHHHHhcCCEEEEecCCCCCchhhc---ccceeecCCCCHHHHHHHHhhCCEEEE
Confidence            468999997 99999999999999999999998766533221   224567778899999999999999854

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=96.78  E-value=0.0018  Score=55.18  Aligned_cols=69  Identities=23%  Similarity=0.219  Sum_probs=50.9

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccc
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVG  130 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~  130 (286)
                      ..++|+|+|. |.+|+.+++.|...|.+|++.+|+.++... ....+...+     +.+++.+.++++|+||++.+
T Consensus       150 ~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~~-~~~~g~~~~-----~~~~l~~~l~~aDiVint~P  218 (287)
T TIGR02853       150 HGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLAR-ITEMGLIPF-----PLNKLEEKVAEIDIVINTIP  218 (287)
T ss_pred             CCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHCCCeee-----cHHHHHHHhccCCEEEECCC
Confidence            4679999997 889999999999999999999998654211 111122221     24557778899999999864

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A

Probab=96.77  E-value=0.0071  Score=44.17  Aligned_cols=85  Identities=19%  Similarity=0.250  Sum_probs=53.0

Q ss_pred             CeEEEEcCC---ChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccccCC
Q 023205           57 EKLLVLGGN---GFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFG  133 (286)
Q Consensus        57 ~~VlVtGat---G~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~~~  133 (286)
                      |+|.|.|++   +..|..+++.|.+.|++|+.+.-+....      .+...       ..++.+.-..+|.++.+..+  
T Consensus         1 ksiAVvGaS~~~~~~g~~v~~~l~~~G~~v~~Vnp~~~~i------~G~~~-------y~sl~e~p~~iDlavv~~~~--   65 (116)
T PF13380_consen    1 KSIAVVGASDNPGKFGYRVLRNLKAAGYEVYPVNPKGGEI------LGIKC-------YPSLAEIPEPIDLAVVCVPP--   65 (116)
T ss_dssp             -EEEEET--SSTTSHHHHHHHHHHHTT-EEEEESTTCSEE------TTEE--------BSSGGGCSST-SEEEE-S-H--
T ss_pred             CEEEEEcccCCCCChHHHHHHHHHhCCCEEEEECCCceEE------CcEEe-------eccccCCCCCCCEEEEEcCH--
Confidence            479999988   7789999999999999999886554321      11211       12222223568988888544  


Q ss_pred             CcchhhhhhhHHHHHHHHHHHHcCCCEEEEEec
Q 023205          134 SNSYMYKINGTANINAIRAASEKGVKRFVYISA  166 (286)
Q Consensus       134 ~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss  166 (286)
                                .....+++.|.+.|++.+++.++
T Consensus        66 ----------~~~~~~v~~~~~~g~~~v~~~~g   88 (116)
T PF13380_consen   66 ----------DKVPEIVDEAAALGVKAVWLQPG   88 (116)
T ss_dssp             ----------HHHHHHHHHHHHHT-SEEEE-TT
T ss_pred             ----------HHHHHHHHHHHHcCCCEEEEEcc
Confidence                      33446788888889999999888

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=96.76  E-value=0.015  Score=46.92  Aligned_cols=97  Identities=15%  Similarity=0.276  Sum_probs=62.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCCCcc--cc----------------------cccCCc--eeEEecc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSS--LR----------------------DSWANN--VIWHQGN  108 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~--~~----------------------~~~~~~--~~~i~~D  108 (286)
                      ..+|+|.|+ |.+|+++++.|...|. ++++++++.-..  ..                      ....+.  ++.+..+
T Consensus        21 ~~~VlviG~-GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~~~~   99 (202)
T TIGR02356        21 NSHVLIIGA-GGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTALKER   99 (202)
T ss_pred             CCCEEEECC-CHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEEehhc
Confidence            568999995 9999999999999995 888888873210  00                      011223  3333334


Q ss_pred             CCCHhHHHHHhcCCCEEEEccccCCCcchhhhhhhHHHHHHHHHHHHcCCCEEEEEec
Q 023205          109 LLSSDSWKEALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISA  166 (286)
Q Consensus       109 l~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss  166 (286)
                      + +.+.+.+.++++|+||.+....           .....+-+.|++.++ .+|+.+.
T Consensus       100 i-~~~~~~~~~~~~D~Vi~~~d~~-----------~~r~~l~~~~~~~~i-p~i~~~~  144 (202)
T TIGR02356       100 V-TAENLELLINNVDLVLDCTDNF-----------ATRYLINDACVALGT-PLISAAV  144 (202)
T ss_pred             C-CHHHHHHHHhCCCEEEECCCCH-----------HHHHHHHHHHHHcCC-CEEEEEe
Confidence            4 3456777889999999885321           112235567777776 4676665

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=96.74  E-value=0.0057  Score=52.85  Aligned_cols=35  Identities=29%  Similarity=0.375  Sum_probs=31.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGR   91 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~   91 (286)
                      .|+|.|.|+ |.+|..+++.|.+.|++|++.+|+..
T Consensus         4 ~m~I~iiG~-G~~G~~lA~~l~~~G~~V~~~~r~~~   38 (308)
T PRK14619          4 PKTIAILGA-GAWGSTLAGLASANGHRVRVWSRRSG   38 (308)
T ss_pred             CCEEEEECc-cHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence            568999985 99999999999999999999999864

>PLN02602 lactate dehydrogenase

Probab=96.74  E-value=0.036  Score=48.64  Aligned_cols=103  Identities=16%  Similarity=0.137  Sum_probs=68.3

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCC--eEEEEecCCCcccccc--------cCCceeEEeccCCCHhHHHHHhcCCCEEE
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGL--TVASLSRSGRSSLRDS--------WANNVIWHQGNLLSSDSWKEALDGVTAVI  126 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~--~V~~l~R~~~~~~~~~--------~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi  126 (286)
                      +||.|+|+ |.+|+.++-.|+.++.  ++.+++.+++......        ......+. ++ .|   + +.++++|+||
T Consensus        38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~~i~-~~-~d---y-~~~~daDiVV  110 (350)
T PLN02602         38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRTKIL-AS-TD---Y-AVTAGSDLCI  110 (350)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCCEEE-eC-CC---H-HHhCCCCEEE
Confidence            59999996 9999999999998874  7999998765421110        01122222 11 12   2 2488999999


Q ss_pred             EccccCCCc----chhhhhhhHHHHHHHHHHHHcCCCEEEEEec
Q 023205          127 SCVGGFGSN----SYMYKINGTANINAIRAASEKGVKRFVYISA  166 (286)
Q Consensus       127 ~~a~~~~~~----~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss  166 (286)
                      .+||....+    .+.+..|..-...+++..++.+.+-++.+=|
T Consensus       111 itAG~~~k~g~tR~dll~~N~~I~~~i~~~I~~~~p~~ivivvt  154 (350)
T PLN02602        111 VTAGARQIPGESRLNLLQRNVALFRKIIPELAKYSPDTILLIVS  154 (350)
T ss_pred             ECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            999975422    2455677777778888888877654444333

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=96.72  E-value=0.035  Score=46.09  Aligned_cols=97  Identities=14%  Similarity=0.143  Sum_probs=62.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCCCcccc------------------------cccCCc--eeEEecc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSLR------------------------DSWANN--VIWHQGN  108 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~~------------------------~~~~~~--~~~i~~D  108 (286)
                      ..+|+|.|+ |.+|+.+++.|...|. ++++++.+.-....                        ....+.  ++.+...
T Consensus        24 ~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~inp~v~i~~~~~~  102 (240)
T TIGR02355        24 ASRVLIVGL-GGLGCAASQYLAAAGVGNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQINPHIAINPINAK  102 (240)
T ss_pred             CCcEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHHCCCcEEEEEecc
Confidence            458999996 9999999999999994 78877776422100                        001233  3344333


Q ss_pred             CCCHhHHHHHhcCCCEEEEccccCCCcchhhhhhhHHHHHHHHHHHHcCCCEEEEEec
Q 023205          109 LLSSDSWKEALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISA  166 (286)
Q Consensus       109 l~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss  166 (286)
                      + +.+.+.+.++++|+||.+....           .....+-++|.+.++ .+|+.++
T Consensus       103 i-~~~~~~~~~~~~DlVvd~~D~~-----------~~r~~ln~~~~~~~i-p~v~~~~  147 (240)
T TIGR02355       103 L-DDAELAALIAEHDIVVDCTDNV-----------EVRNQLNRQCFAAKV-PLVSGAA  147 (240)
T ss_pred             C-CHHHHHHHhhcCCEEEEcCCCH-----------HHHHHHHHHHHHcCC-CEEEEEe
Confidence            3 3456777889999999885321           112244577778876 4666555

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.72  E-value=0.0066  Score=51.57  Aligned_cols=55  Identities=16%  Similarity=0.283  Sum_probs=45.5

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccc
Q 023205           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVG  130 (286)
Q Consensus        54 ~~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~  130 (286)
                      ...++|+|.|++|.+|+.++..|+++|..|+++.|..                      .++.+.++++|+||++.|
T Consensus       157 l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t----------------------~~L~~~~~~aDIvI~AtG  211 (283)
T PRK14192        157 LAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSRT----------------------QNLPELVKQADIIVGAVG  211 (283)
T ss_pred             CCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCc----------------------hhHHHHhccCCEEEEccC
Confidence            3568999999999999999999999999998887631                      225556688999999986

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like

Probab=96.70  E-value=0.04  Score=44.35  Aligned_cols=98  Identities=17%  Similarity=0.262  Sum_probs=60.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCCCcc--cc------------------------cccCC--ceeEEe
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSS--LR------------------------DSWAN--NVIWHQ  106 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~--~~------------------------~~~~~--~~~~i~  106 (286)
                      ..+|+|.|+.| +|+++++.|...|. ++++++.+.-..  ..                        +...+  +++.+.
T Consensus        19 ~s~VlviG~gg-lGsevak~L~~~GVg~i~lvD~d~ve~snl~rq~~~~~~~~~iG~~Ka~~~~~~L~~lNp~v~i~~~~   97 (198)
T cd01485          19 SAKVLIIGAGA-LGAEIAKNLVLAGIDSITIVDHRLVSTEDLGSNFFLDAEVSNSGMNRAAASYEFLQELNPNVKLSIVE   97 (198)
T ss_pred             hCcEEEECCCH-HHHHHHHHHHHcCCCEEEEEECCcCChhcCcccEecccchhhcCchHHHHHHHHHHHHCCCCEEEEEe
Confidence            45899999855 99999999999995 688887763210  00                        00123  344444


Q ss_pred             ccCCC-HhHHHHHhcCCCEEEEccccCCCcchhhhhhhHHHHHHHHHHHHcCCCEEEEEec
Q 023205          107 GNLLS-SDSWKEALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISA  166 (286)
Q Consensus       107 ~Dl~d-~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss  166 (286)
                      .++.+ .+...+.++++|+||.+...           ......+-+.|++.++ .+|+.++
T Consensus        98 ~~~~~~~~~~~~~~~~~dvVi~~~d~-----------~~~~~~ln~~c~~~~i-p~i~~~~  146 (198)
T cd01485          98 EDSLSNDSNIEEYLQKFTLVIATEEN-----------YERTAKVNDVCRKHHI-PFISCAT  146 (198)
T ss_pred             cccccchhhHHHHHhCCCEEEECCCC-----------HHHHHHHHHHHHHcCC-CEEEEEe
Confidence            44432 34556677888988877322           1122244577777776 4666666

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol

>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]

Probab=96.68  E-value=0.19  Score=38.54  Aligned_cols=136  Identities=19%  Similarity=0.181  Sum_probs=74.6

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCC--C-Hh----HHHHHhc--CCCEEEE
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLL--S-SD----SWKEALD--GVTAVIS  127 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~--d-~~----~~~~~~~--~~d~vi~  127 (286)
                      .+|+|-|+-|-+|+++++.+.+++|-|.-++-.+.+..     +.--++.+|-.  + ++    .+.+.+.  .+|.||+
T Consensus         4 grVivYGGkGALGSacv~~FkannywV~siDl~eNe~A-----d~sI~V~~~~swtEQe~~v~~~vg~sL~gekvDav~C   78 (236)
T KOG4022|consen    4 GRVIVYGGKGALGSACVEFFKANNYWVLSIDLSENEQA-----DSSILVDGNKSWTEQEQSVLEQVGSSLQGEKVDAVFC   78 (236)
T ss_pred             ceEEEEcCcchHhHHHHHHHHhcCeEEEEEeecccccc-----cceEEecCCcchhHHHHHHHHHHHHhhcccccceEEE
Confidence            48999999999999999999999998887776654421     11112222221  1 12    2223333  4899999


Q ss_pred             ccccCC--C---------cchhhhhhhHHHHHHHHHHHH-cCCCEEEEEecCC-cCCCCccccchHHHHHHHHHHHHH--
Q 023205          128 CVGGFG--S---------NSYMYKINGTANINAIRAASE-KGVKRFVYISAAD-FGVANYLLQGYYEGKRAAETELLT--  192 (286)
Q Consensus       128 ~a~~~~--~---------~~~~~~~~~~~~~~l~~~a~~-~~v~~~v~~Ss~~-~~~~~~~~~~y~~sK~~~E~~~~~--  192 (286)
                      .||.+.  +         .+.+++..+....--...+.. ....-++-+..+. .-...+..-+|+..|.+..++...  
T Consensus        79 VAGGWAGGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK~GGLL~LtGAkaAl~gTPgMIGYGMAKaAVHqLt~SLa  158 (236)
T KOG4022|consen   79 VAGGWAGGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLKPGGLLQLTGAKAALGGTPGMIGYGMAKAAVHQLTSSLA  158 (236)
T ss_pred             eeccccCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccCCCceeeecccccccCCCCcccchhHHHHHHHHHHHHhc
Confidence            998652  1         112222222211101111111 1222344444321 112233456899999999997753  


Q ss_pred             --hCCCc
Q 023205          193 --RYPYG  197 (286)
Q Consensus       193 --~~g~~  197 (286)
                        .+|++
T Consensus       159 ak~SGlP  165 (236)
T KOG4022|consen  159 AKDSGLP  165 (236)
T ss_pred             ccccCCC
Confidence              45654

>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional

Probab=96.68  E-value=0.0087  Score=56.77  Aligned_cols=72  Identities=15%  Similarity=0.184  Sum_probs=59.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHH-hcCCCEEEEcc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEA-LDGVTAVISCV  129 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~-~~~~d~vi~~a  129 (286)
                      .++|+|.|. |.+|+.+++.|.++|+++++++.+++.... ....+..++.||.+|++.++++ ++++|.|+-+.
T Consensus       400 ~~~vII~G~-Gr~G~~va~~L~~~g~~vvvID~d~~~v~~-~~~~g~~v~~GDat~~~~L~~agi~~A~~vvv~~  472 (621)
T PRK03562        400 QPRVIIAGF-GRFGQIVGRLLLSSGVKMTVLDHDPDHIET-LRKFGMKVFYGDATRMDLLESAGAAKAEVLINAI  472 (621)
T ss_pred             cCcEEEEec-ChHHHHHHHHHHhCCCCEEEEECCHHHHHH-HHhcCCeEEEEeCCCHHHHHhcCCCcCCEEEEEe
Confidence            358999996 999999999999999999999998765322 2235788999999999988764 46789888774

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=96.67  E-value=0.0031  Score=49.86  Aligned_cols=72  Identities=18%  Similarity=0.122  Sum_probs=50.5

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccccCCC
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFGS  134 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~~~~  134 (286)
                      ..++|.|.|. |.||+.+++.|..-|.+|++.+|........ ....+        ...+++++++.+|+|+.+......
T Consensus        35 ~g~tvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~-~~~~~--------~~~~l~ell~~aDiv~~~~plt~~  104 (178)
T PF02826_consen   35 RGKTVGIIGY-GRIGRAVARRLKAFGMRVIGYDRSPKPEEGA-DEFGV--------EYVSLDELLAQADIVSLHLPLTPE  104 (178)
T ss_dssp             TTSEEEEEST-SHHHHHHHHHHHHTT-EEEEEESSCHHHHHH-HHTTE--------EESSHHHHHHH-SEEEE-SSSSTT
T ss_pred             CCCEEEEEEE-cCCcCeEeeeeecCCceeEEecccCChhhhc-ccccc--------eeeehhhhcchhhhhhhhhccccc
Confidence            4689999995 9999999999999999999999997652200 00011        223577889999999998876544


Q ss_pred             cc
Q 023205          135 NS  136 (286)
Q Consensus       135 ~~  136 (286)
                      ..
T Consensus       105 T~  106 (178)
T PF02826_consen  105 TR  106 (178)
T ss_dssp             TT
T ss_pred             cc
Confidence            33

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>PLN02353 probable UDP-glucose 6-dehydrogenase

Probab=96.67  E-value=0.0086  Score=54.67  Aligned_cols=110  Identities=14%  Similarity=0.041  Sum_probs=61.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCC--CeEEEEecCCCcccccccCCceeEEecc------------CCCHhHHHHHhcC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRG--LTVASLSRSGRSSLRDSWANNVIWHQGN------------LLSSDSWKEALDG  121 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g--~~V~~l~R~~~~~~~~~~~~~~~~i~~D------------l~d~~~~~~~~~~  121 (286)
                      +|+|.|.| .|++|..++..|.+.|  ++|++++.++++... .......+.+-+            +.-..++.+++++
T Consensus         1 ~m~I~ViG-~GyvGl~~A~~lA~~g~g~~V~gvD~~~~~v~~-l~~g~~~~~e~gl~ell~~~~~~~l~~t~~~~~~i~~   78 (473)
T PLN02353          1 MVKICCIG-AGYVGGPTMAVIALKCPDIEVVVVDISVPRIDA-WNSDQLPIYEPGLDEVVKQCRGKNLFFSTDVEKHVAE   78 (473)
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhcCCCCeEEEEECCHHHHHH-HHcCCCccCCCCHHHHHHHhhcCCEEEEcCHHHHHhc
Confidence            46899998 5999999999999985  789999988655211 000011111111            1111234557788


Q ss_pred             CCEEEEccccCCCc---chhhhhhhHHHHHHHHHHHHc-CCCEEEEEecC
Q 023205          122 VTAVISCVGGFGSN---SYMYKINGTANINAIRAASEK-GVKRFVYISAA  167 (286)
Q Consensus       122 ~d~vi~~a~~~~~~---~~~~~~~~~~~~~l~~~a~~~-~v~~~v~~Ss~  167 (286)
                      +|++|-|.+.....   ......+.......++...+. .-..+|.+.|.
T Consensus        79 advi~I~V~TP~~~~g~~~~~~~Dls~v~~a~~~i~~~l~~~~lVv~~ST  128 (473)
T PLN02353         79 ADIVFVSVNTPTKTRGLGAGKAADLTYWESAARMIADVSKSDKIVVEKST  128 (473)
T ss_pred             CCEEEEEeCCCCCCCCCcCCCCCcHHHHHHHHHHHHhhCCCCcEEEEeCC
Confidence            99999998743221   011233444444444444332 22345555553

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=96.67  E-value=0.028  Score=46.29  Aligned_cols=97  Identities=16%  Similarity=0.223  Sum_probs=62.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCCCccc--c----------------------cccCC--ceeEEecc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSL--R----------------------DSWAN--NVIWHQGN  108 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~--~----------------------~~~~~--~~~~i~~D  108 (286)
                      ..+|+|.|+ |.+|+++++.|...|. ++++++.+.-...  .                      ....+  +++.+..+
T Consensus        21 ~~~VlivG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~~~~   99 (228)
T cd00757          21 NARVLVVGA-GGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEAYNER   99 (228)
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEEecce
Confidence            568999995 9999999999999995 6777665431100  0                      00112  34555555


Q ss_pred             CCCHhHHHHHhcCCCEEEEccccCCCcchhhhhhhHHHHHHHHHHHHcCCCEEEEEec
Q 023205          109 LLSSDSWKEALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISA  166 (286)
Q Consensus       109 l~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss  166 (286)
                      + +.+.+.+.++++|+||.|....           .....+-+.|.+.++ .+|+.+.
T Consensus       100 i-~~~~~~~~~~~~DvVi~~~d~~-----------~~r~~l~~~~~~~~i-p~i~~g~  144 (228)
T cd00757         100 L-DAENAEELIAGYDLVLDCTDNF-----------ATRYLINDACVKLGK-PLVSGAV  144 (228)
T ss_pred             e-CHHHHHHHHhCCCEEEEcCCCH-----------HHHHHHHHHHHHcCC-CEEEEEe
Confidence            5 3566778888999999986431           112245677777776 5666654

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=96.66  E-value=0.0027  Score=54.44  Aligned_cols=69  Identities=17%  Similarity=0.169  Sum_probs=51.3

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccc
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVG  130 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~  130 (286)
                      ..++|+|+|. |.+|..+++.|...|.+|++.+|++..... ....+.+++     ..+++.+.+.++|+||++++
T Consensus       151 ~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~-~~~~G~~~~-----~~~~l~~~l~~aDiVI~t~p  219 (296)
T PRK08306        151 HGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHLAR-ITEMGLSPF-----HLSELAEEVGKIDIIFNTIP  219 (296)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHH-HHHcCCeee-----cHHHHHHHhCCCCEEEECCC
Confidence            4679999996 889999999999999999999998654211 111233332     23456778889999999864

>KOG0172 consensus Lysine-ketoglutarate reductase/saccharopine dehydrogenase [Amino acid transport and metabolism]

Probab=96.66  E-value=0.0026  Score=55.15  Aligned_cols=75  Identities=17%  Similarity=0.187  Sum_probs=62.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCC-CeEEEEecCCCcccccccCCceeEEeccCCCHh-HHHHHhcCCCEEEEcccc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRG-LTVASLSRSGRSSLRDSWANNVIWHQGNLLSSD-SWKEALDGVTAVISCVGG  131 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g-~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~-~~~~~~~~~d~vi~~a~~  131 (286)
                      +++||+.|+ ||+.+.+++.|.+++ .+|++.+|...+........+++.+..|+.+++ .+++.++..|.++.+...
T Consensus         2 ~~~vlllgs-g~v~~p~~d~ls~~~dv~vtva~~~~~~~~~~~~~~~~~av~ldv~~~~~~L~~~v~~~D~viSLlP~   78 (445)
T KOG0172|consen    2 KKGVLLLGS-GFVSRPVADFLSRKKDVNVTVASRTLKDAEALVKGINIKAVSLDVADEELALRKEVKPLDLVISLLPY   78 (445)
T ss_pred             CcceEEecC-ccccchHHHHHhhcCCceEEEehhhHHHHHHHhcCCCccceEEEccchHHHHHhhhcccceeeeeccc
Confidence            578999995 999999999999986 589998888766444334456899999999988 899999999999988764

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=96.65  E-value=0.0026  Score=54.14  Aligned_cols=69  Identities=17%  Similarity=0.295  Sum_probs=48.2

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCC-CeEEEEecCCCcccc--cccCCc--eeEEeccCCCHhHHHHHhcCCCEEEEcc
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRG-LTVASLSRSGRSSLR--DSWANN--VIWHQGNLLSSDSWKEALDGVTAVISCV  129 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g-~~V~~l~R~~~~~~~--~~~~~~--~~~i~~Dl~d~~~~~~~~~~~d~vi~~a  129 (286)
                      ..++|+|+|+ |.+|+.++..|.+.| .+|++++|+.++...  +.....  +.+   ++    +..+.+.++|+||++.
T Consensus       122 ~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~---~~----~~~~~~~~~DivInaT  193 (278)
T PRK00258        122 KGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAEL---DL----ELQEELADFDLIINAT  193 (278)
T ss_pred             CCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceee---cc----cchhccccCCEEEECC
Confidence            4578999997 999999999999999 799999998654211  111100  111   11    2335667899999997


Q ss_pred             cc
Q 023205          130 GG  131 (286)
Q Consensus       130 ~~  131 (286)
                      +.
T Consensus       194 p~  195 (278)
T PRK00258        194 SA  195 (278)
T ss_pred             cC
Confidence            64

>COG0136 Asd Aspartate-semialdehyde dehydrogenase [Amino acid transport and metabolism]

Probab=96.65  E-value=0.015  Score=49.96  Aligned_cols=26  Identities=27%  Similarity=0.374  Sum_probs=23.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGL   81 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~   81 (286)
                      +++|.|.||||.+|+.+++.|.++..
T Consensus         1 ~~~VavvGATG~VG~~~~~~L~e~~f   26 (334)
T COG0136           1 KLNVAVLGATGAVGQVLLELLEERHF   26 (334)
T ss_pred             CcEEEEEeccchHHHHHHHHHHhcCC
Confidence            36899999999999999999999653

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=96.65  E-value=0.0079  Score=48.54  Aligned_cols=69  Identities=17%  Similarity=0.299  Sum_probs=48.5

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCccccccc-CCceeEEeccCCCHhHHHHHhcCCCEEEEcc
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSW-ANNVIWHQGNLLSSDSWKEALDGVTAVISCV  129 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~-~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a  129 (286)
                      ..++|+|.|| |-+|...++.|++.|++|+++++...+...... ...+.+..-++.     ...+.++|.||-+.
T Consensus         9 ~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~~~~l~~l~~~~~i~~~~~~~~-----~~~l~~adlViaaT   78 (202)
T PRK06718          9 SNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPELTENLVKLVEEGKIRWKQKEFE-----PSDIVDAFLVIAAT   78 (202)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCCCHHHHHHHhCCCEEEEecCCC-----hhhcCCceEEEEcC
Confidence            3679999997 999999999999999999999876544322211 124555544433     23467889888774

>cd05295 MDH_like Malate dehydrogenase-like

Probab=96.64  E-value=0.024  Score=51.10  Aligned_cols=151  Identities=6%  Similarity=0.010  Sum_probs=86.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHC---CC----eEEEEecCCCcc-cc-------c---ccCCceeEEeccCCCHhHHHH
Q 023205           56 SEKLLVLGGNGFVGSHICREALDR---GL----TVASLSRSGRSS-LR-------D---SWANNVIWHQGNLLSSDSWKE  117 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~---g~----~V~~l~R~~~~~-~~-------~---~~~~~~~~i~~Dl~d~~~~~~  117 (286)
                      +-+|+||||+|.||.+|+-.+.+-   |.    .+++++...... ..       .   ....++.+. .|      -.+
T Consensus       123 p~~V~vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi~~~~~~l~G~amDL~D~a~pll~~v~i~-~~------~~e  195 (452)
T cd05295         123 PLQVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSPENLEKLKGLVMEVEDLAFPLLRGISVT-TD------LDV  195 (452)
T ss_pred             ceEEEEecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcCCCchhhHHHHHHHHHHhHHhhcCCcEEE-EC------CHH
Confidence            458999999999999999998873   31    355555531111 10       0   001123333 22      246


Q ss_pred             HhcCCCEEEEccccCCCc----chhhhhhhHHHHHHHHHHHHcCC--CEEEEEec-C-C---------c-CCCCccccch
Q 023205          118 ALDGVTAVISCVGGFGSN----SYMYKINGTANINAIRAASEKGV--KRFVYISA-A-D---------F-GVANYLLQGY  179 (286)
Q Consensus       118 ~~~~~d~vi~~a~~~~~~----~~~~~~~~~~~~~l~~~a~~~~v--~~~v~~Ss-~-~---------~-~~~~~~~~~y  179 (286)
                      .++++|+||.++|....+    ....+.|......+.+...+...  .+++.+.| . +         . +-+.....+.
T Consensus       196 a~~daDvvIitag~prk~G~~R~DLL~~N~~Ifk~~g~~I~~~a~~~~~VlVv~tNPvD~~t~i~~k~apgiP~~rVig~  275 (452)
T cd05295         196 AFKDAHVIVLLDDFLIKEGEDLEGCIRSRVAICQLYGPLIEKNAKEDVKVIVAGRTFLNLKTSILIKYAPSIPRKNIIAV  275 (452)
T ss_pred             HhCCCCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHHHHcCCCCHHHEEEe
Confidence            789999999999875322    35567788777888888877765  56666665 1 0         0 1111111111


Q ss_pred             HHH-HHHHHHHHHHhCCCcEEEEeeCeeecCCCCC
Q 023205          180 YEG-KRAAETELLTRYPYGGVILRPGFIYGTRTVG  213 (286)
Q Consensus       180 ~~s-K~~~E~~~~~~~g~~~~ilRp~~v~g~~~~~  213 (286)
                      +.. ...+-..+.+..+++..-|+-..|+|.....
T Consensus       276 gtlds~R~r~~LA~kl~V~~~~V~~~~VwGeHG~s  310 (452)
T cd05295         276 ARLQENRAKALLARKLNVNSAGIKDVIVWGNIGGN  310 (452)
T ss_pred             cchHHHHHHHHHHHHhCcCHHHceeeEEEEccCCc
Confidence            110 1122223445677777777777777765543

These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR00518 alaDH alanine dehydrogenase

Probab=96.63  E-value=0.0063  Score=53.91  Aligned_cols=74  Identities=19%  Similarity=0.141  Sum_probs=54.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEcccc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG  131 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~  131 (286)
                      ..+|+|+|+ |-+|...++.|...|.+|++++|++.+..... ...-..+..+..+.+.+.+.+.++|+||.+++.
T Consensus       167 ~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~-~~~g~~v~~~~~~~~~l~~~l~~aDvVI~a~~~  240 (370)
T TIGR00518       167 PGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLD-AEFGGRIHTRYSNAYEIEDAVKRADLLIGAVLI  240 (370)
T ss_pred             CceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHH-HhcCceeEeccCCHHHHHHHHccCCEEEEcccc
Confidence            457999987 99999999999999999999999865421100 000112334556778888899999999998754

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.62  E-value=0.012  Score=53.48  Aligned_cols=73  Identities=18%  Similarity=0.090  Sum_probs=50.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCccc---ccccCCceeEEeccCCCHhHHHHHhc-CCCEEEEcccc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSL---RDSWANNVIWHQGNLLSSDSWKEALD-GVTAVISCVGG  131 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~---~~~~~~~~~~i~~Dl~d~~~~~~~~~-~~d~vi~~a~~  131 (286)
                      .++|+|||++| +|...++.|.+.|++|.+.+++.....   ......++++..++.  ...   .+. ++|.||...|.
T Consensus         5 ~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~~g~~~~~~~~--~~~---~~~~~~d~vV~s~gi   78 (447)
T PRK02472          5 NKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLEEGIKVICGSH--PLE---LLDEDFDLMVKNPGI   78 (447)
T ss_pred             CCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHhcCCEEEeCCC--CHH---HhcCcCCEEEECCCC
Confidence            56899999976 999999999999999999987653311   112223566654432  222   233 48999999886


Q ss_pred             CCC
Q 023205          132 FGS  134 (286)
Q Consensus       132 ~~~  134 (286)
                      ..+
T Consensus        79 ~~~   81 (447)
T PRK02472         79 PYT   81 (447)
T ss_pred             CCC
Confidence            543

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=96.60  E-value=0.0092  Score=52.29  Aligned_cols=75  Identities=25%  Similarity=0.357  Sum_probs=49.9

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCC-CeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhc----CCCEEEEcc
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRG-LTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD----GVTAVISCV  129 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g-~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~----~~d~vi~~a  129 (286)
                      ..+.|||.||+|.+|+..++-....+ ..|++..+.......+... .-+  ..|+.+++.++...+    ++|+|+.|+
T Consensus       157 ~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~l~k~lG-Ad~--vvdy~~~~~~e~~kk~~~~~~DvVlD~v  233 (347)
T KOG1198|consen  157 KGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLELVKKLG-ADE--VVDYKDENVVELIKKYTGKGVDVVLDCV  233 (347)
T ss_pred             CCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchHHHHHHcC-CcE--eecCCCHHHHHHHHhhcCCCccEEEECC
Confidence            45689999999999999999988888 4555444443332222211 122  246667665555544    599999999


Q ss_pred             ccC
Q 023205          130 GGF  132 (286)
Q Consensus       130 ~~~  132 (286)
                      +..
T Consensus       234 g~~  236 (347)
T KOG1198|consen  234 GGS  236 (347)
T ss_pred             CCC
Confidence            874

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.57  E-value=0.0087  Score=50.97  Aligned_cols=56  Identities=18%  Similarity=0.242  Sum_probs=47.4

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccccC
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGF  132 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~~  132 (286)
                      ..++|.|.|.+|.+|+.++..|+++|+.|++..|...                      ++.++.+.+|+||-+.|..
T Consensus       158 ~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~----------------------~l~e~~~~ADIVIsavg~~  213 (301)
T PRK14194        158 TGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRST----------------------DAKALCRQADIVVAAVGRP  213 (301)
T ss_pred             CCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCC----------------------CHHHHHhcCCEEEEecCCh
Confidence            5789999999999999999999999999999976632                      3556778899999988764

>PRK08223 hypothetical protein; Validated

Probab=96.57  E-value=0.034  Score=47.12  Aligned_cols=99  Identities=13%  Similarity=0.083  Sum_probs=63.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCCCccc--c----------------------cccCC--ceeEEecc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSL--R----------------------DSWAN--NVIWHQGN  108 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~--~----------------------~~~~~--~~~~i~~D  108 (286)
                      ..+|+|.|+ |.+|+++++.|...|. ++.+++.+.-+..  .                      ....+  +++.+...
T Consensus        27 ~s~VlIvG~-GGLGs~va~~LA~aGVG~i~lvD~D~Ve~SNLnRQ~l~~~~diG~~Kve~a~~~l~~iNP~v~V~~~~~~  105 (287)
T PRK08223         27 NSRVAIAGL-GGVGGIHLLTLARLGIGKFTIADFDVFELRNFNRQAGAMMSTLGRPKAEVLAEMVRDINPELEIRAFPEG  105 (287)
T ss_pred             cCCEEEECC-CHHHHHHHHHHHHhCCCeEEEEeCCCcchhccccccCcChhHCCCcHHHHHHHHHHHHCCCCEEEEEecc
Confidence            458999997 9999999999999995 7777777642210  0                      01123  34455555


Q ss_pred             CCCHhHHHHHhcCCCEEEEccccCCCcchhhhhhhHHHHHHHHHHHHcCCCEEEEEec
Q 023205          109 LLSSDSWKEALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISA  166 (286)
Q Consensus       109 l~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss  166 (286)
                      ++ ++.+.++++++|+|+.+.-..         +...-..+-++|.+.++ .+|+.+.
T Consensus       106 l~-~~n~~~ll~~~DlVvD~~D~~---------~~~~r~~ln~~c~~~~i-P~V~~~~  152 (287)
T PRK08223        106 IG-KENADAFLDGVDVYVDGLDFF---------EFDARRLVFAACQQRGI-PALTAAP  152 (287)
T ss_pred             cC-ccCHHHHHhCCCEEEECCCCC---------cHHHHHHHHHHHHHcCC-CEEEEec
Confidence            54 456778899999999764211         01112345677888886 4777665

>PRK10537 voltage-gated potassium channel; Provisional

Probab=96.57  E-value=0.011  Score=52.56  Aligned_cols=70  Identities=14%  Similarity=0.175  Sum_probs=55.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHH-hcCCCEEEEcc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEA-LDGVTAVISCV  129 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~-~~~~d~vi~~a  129 (286)
                      +.+|+|.|. |.+|+.++++|.++|.+|++++.+..   .+...++..++.||.+|++.++++ +++++.|+-+.
T Consensus       240 k~HvII~G~-g~lg~~v~~~L~~~g~~vvVId~d~~---~~~~~~g~~vI~GD~td~e~L~~AgI~~A~aVI~~t  310 (393)
T PRK10537        240 KDHFIICGH-SPLAINTYLGLRQRGQAVTVIVPLGL---EHRLPDDADLIPGDSSDSAVLKKAGAARARAILALR  310 (393)
T ss_pred             CCeEEEECC-ChHHHHHHHHHHHCCCCEEEEECchh---hhhccCCCcEEEeCCCCHHHHHhcCcccCCEEEEcC
Confidence            457999996 89999999999999999988886532   223345788999999999988865 56789998764

>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional

Probab=96.57  E-value=0.019  Score=51.73  Aligned_cols=36  Identities=19%  Similarity=0.285  Sum_probs=32.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRS   92 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~   92 (286)
                      +++|.|.|. |++|..++..|.++|++|++.++++++
T Consensus         3 ~~kI~VIGl-G~~G~~~A~~La~~G~~V~~~D~~~~~   38 (415)
T PRK11064          3 FETISVIGL-GYIGLPTAAAFASRQKQVIGVDINQHA   38 (415)
T ss_pred             ccEEEEECc-chhhHHHHHHHHhCCCEEEEEeCCHHH
Confidence            468999985 999999999999999999999998765

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=96.56  E-value=0.0036  Score=51.22  Aligned_cols=69  Identities=22%  Similarity=0.128  Sum_probs=47.3

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccc--c-----CCce--eEEeccCCCHhHHHHHhcCCCEEEE
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDS--W-----ANNV--IWHQGNLLSSDSWKEALDGVTAVIS  127 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~--~-----~~~~--~~i~~Dl~d~~~~~~~~~~~d~vi~  127 (286)
                      |+|.|+||+|.+|..++..|.+.|++|.+.+|++++.....  .     ..++  .+...      +..++++++|+||.
T Consensus         1 MkI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~~~~~~~~~~g~~~~~~~~------~~~ea~~~aDvVil   74 (219)
T TIGR01915         1 MKIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKAEEAAAKALEELGHGGSDIKVTGA------DNAEAAKRADVVIL   74 (219)
T ss_pred             CEEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHHHHHHHHHhhccccCCCceEEEe------ChHHHHhcCCEEEE
Confidence            47999999999999999999999999999999865421100  0     0011  11111      12456778999998


Q ss_pred             cccc
Q 023205          128 CVGG  131 (286)
Q Consensus       128 ~a~~  131 (286)
                      +..+
T Consensus        75 avp~   78 (219)
T TIGR01915        75 AVPW   78 (219)
T ss_pred             ECCH
Confidence            8654

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.53  E-value=0.012  Score=49.81  Aligned_cols=57  Identities=19%  Similarity=0.318  Sum_probs=48.2

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccccC
Q 023205           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGF  132 (286)
Q Consensus        54 ~~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~~  132 (286)
                      ...++|+|+|.++.+|+.++..|+++|..|+++.++.                      ..+.+.++++|+||.+.|..
T Consensus       156 l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t----------------------~~l~~~~~~ADIVIsAvg~p  212 (286)
T PRK14175        156 LEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRS----------------------KDMASYLKDADVIVSAVGKP  212 (286)
T ss_pred             CCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc----------------------hhHHHHHhhCCEEEECCCCC
Confidence            3578999999999999999999999999999888652                      23667888999999998764

>TIGR02717 AcCoA-syn-alpha acetyl coenzyme A synthetase (ADP forming), alpha domain

Probab=96.53  E-value=0.097  Score=47.70  Aligned_cols=86  Identities=23%  Similarity=0.283  Sum_probs=61.4

Q ss_pred             CCeEEEEcCC---ChhHHHHHHHHHHCCC--eEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccc
Q 023205           56 SEKLLVLGGN---GFVGSHICREALDRGL--TVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVG  130 (286)
Q Consensus        56 ~~~VlVtGat---G~iG~~l~~~Ll~~g~--~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~  130 (286)
                      +++|.|.|++   |.+|..+++.|.+.||  +|+.++......      .+       +.-..++.++-+.+|.++.+..
T Consensus         7 p~siavvGaS~~~~~~g~~~~~~l~~~gf~g~v~~Vnp~~~~i------~G-------~~~~~sl~~lp~~~Dlavi~vp   73 (447)
T TIGR02717         7 PKSVAVIGASRDPGKVGYAIMKNLIEGGYKGKIYPVNPKAGEI------LG-------VKAYPSVLEIPDPVDLAVIVVP   73 (447)
T ss_pred             CCEEEEEccCCCCCchHHHHHHHHHhCCCCCcEEEECCCCCcc------CC-------ccccCCHHHCCCCCCEEEEecC
Confidence            5689999998   7789999999999997  687776553221      11       2222334455567898887754


Q ss_pred             cCCCcchhhhhhhHHHHHHHHHHHHcCCCEEEEEec
Q 023205          131 GFGSNSYMYKINGTANINAIRAASEKGVKRFVYISA  166 (286)
Q Consensus       131 ~~~~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss  166 (286)
                      +            .....+++.|.+.|++.+|.+|+
T Consensus        74 ~------------~~~~~~l~e~~~~gv~~~vi~s~   97 (447)
T TIGR02717        74 A------------KYVPQVVEECGEKGVKGAVVITA   97 (447)
T ss_pred             H------------HHHHHHHHHHHhcCCCEEEEECC
Confidence            3            34456788888999999998887

Although technically reversible, it is believed that this group of ADP-dependent acetyl-CoA synthetases (ACS) act in the direction of acetate and ATP production in the organisms in which it has been characterized. In most species this protein exists as a fused alpha-beta domain polypeptide. In Pyrococcus and related species, however the domains exist as separate polypeptides. This model represents the alpha (N-terminal) domain. In Pyrococcus and related species there appears to have been the development of a paralogous family such that four other proteins are close relatives. In reference, one of these (along with its beta-domain partner) was characterized as ACS-II showing specificity for phenylacetyl-CoA. This model has been constructed to exclude these non-ACS-I paralogs. This may result in new, authentic ACS-I sequences falling below the trusted cutoff.

>PRK11880 pyrroline-5-carboxylate reductase; Reviewed

Probab=96.50  E-value=0.012  Score=49.59  Aligned_cols=68  Identities=21%  Similarity=0.133  Sum_probs=45.9

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCC---CeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccc
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRG---LTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVG  130 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g---~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~  130 (286)
                      ||++|.|.|+ |.+|..+++.|.+.|   ++|.+.+|+++........-++.+     .  .+..+++.++|+||.+..
T Consensus         1 ~mm~I~iIG~-G~mG~~la~~l~~~g~~~~~v~v~~r~~~~~~~~~~~~g~~~-----~--~~~~~~~~~advVil~v~   71 (267)
T PRK11880          1 MMKKIGFIGG-GNMASAIIGGLLASGVPAKDIIVSDPSPEKRAALAEEYGVRA-----A--TDNQEAAQEADVVVLAVK   71 (267)
T ss_pred             CCCEEEEEec-hHHHHHHHHHHHhCCCCcceEEEEcCCHHHHHHHHHhcCCee-----c--CChHHHHhcCCEEEEEcC
Confidence            4678999996 999999999999998   789999998644211100002221     1  123345678899988763

>PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated

Probab=96.50  E-value=0.016  Score=51.85  Aligned_cols=70  Identities=19%  Similarity=0.351  Sum_probs=53.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhc--CCCEEEEcc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD--GVTAVISCV  129 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~--~~d~vi~~a  129 (286)
                      .|+|+|+|+ |..|..++..+.+.|++|++++.++...... ..+  .++..|..|.+.+.++.+  ++|.|+...
T Consensus        12 ~~~ilIiG~-g~~~~~~~~a~~~~G~~v~~~~~~~~~~~~~-~ad--~~~~~~~~d~~~l~~~~~~~~id~vi~~~   83 (395)
T PRK09288         12 ATRVMLLGS-GELGKEVAIEAQRLGVEVIAVDRYANAPAMQ-VAH--RSHVIDMLDGDALRAVIEREKPDYIVPEI   83 (395)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCchHH-hhh--heEECCCCCHHHHHHHHHHhCCCEEEEee
Confidence            568999996 8999999999999999999999876542111 111  246678889888888887  799988653

>PLN02256 arogenate dehydrogenase

Probab=96.50  E-value=0.0073  Score=51.97  Aligned_cols=67  Identities=21%  Similarity=0.269  Sum_probs=46.2

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHh-cCCCEEEEcccc
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEAL-DGVTAVISCVGG  131 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~-~~~d~vi~~a~~  131 (286)
                      .+++|.|.| .|.+|..+++.|.+.|++|++.+|+.......  ..++..    ..+   .++++ .++|+||.+..+
T Consensus        35 ~~~kI~IIG-~G~mG~slA~~L~~~G~~V~~~d~~~~~~~a~--~~gv~~----~~~---~~e~~~~~aDvVilavp~  102 (304)
T PLN02256         35 RKLKIGIVG-FGNFGQFLAKTFVKQGHTVLATSRSDYSDIAA--ELGVSF----FRD---PDDFCEEHPDVVLLCTSI  102 (304)
T ss_pred             CCCEEEEEe-eCHHHHHHHHHHHhCCCEEEEEECccHHHHHH--HcCCee----eCC---HHHHhhCCCCEEEEecCH
Confidence            467899999 59999999999999999999999885321111  112321    223   33343 468999998754

>PRK08328 hypothetical protein; Provisional

Probab=96.50  E-value=0.061  Score=44.39  Aligned_cols=97  Identities=21%  Similarity=0.322  Sum_probs=59.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCCCccc----------------c---------cccCC--ceeEEec
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSL----------------R---------DSWAN--NVIWHQG  107 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~----------------~---------~~~~~--~~~~i~~  107 (286)
                      ..+|+|.|+ |.+|+++++.|...|. ++++++.+.-+..                .         ....+  .++.+..
T Consensus        27 ~~~VlIiG~-GGlGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~~k~~~a~~~l~~~np~v~v~~~~~  105 (231)
T PRK08328         27 KAKVAVVGV-GGLGSPVAYYLAAAGVGRILLIDEQTPELSNLNRQILHWEEDLGKNPKPLSAKWKLERFNSDIKIETFVG  105 (231)
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCccChhhhccccccChhhcCchHHHHHHHHHHHHhCCCCEEEEEec
Confidence            458999996 9999999999999995 7777776532210                0         00012  3334444


Q ss_pred             cCCCHhHHHHHhcCCCEEEEccccCCCcchhhhhhhHHHHHHHHHHHHcCCCEEEEEec
Q 023205          108 NLLSSDSWKEALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISA  166 (286)
Q Consensus       108 Dl~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss  166 (286)
                      .+ +++.+.+.++++|+||.+....           .....+-++|++.++ .+|+.++
T Consensus       106 ~~-~~~~~~~~l~~~D~Vid~~d~~-----------~~r~~l~~~~~~~~i-p~i~g~~  151 (231)
T PRK08328        106 RL-SEENIDEVLKGVDVIVDCLDNF-----------ETRYLLDDYAHKKGI-PLVHGAV  151 (231)
T ss_pred             cC-CHHHHHHHHhcCCEEEECCCCH-----------HHHHHHHHHHHHcCC-CEEEEee
Confidence            44 3455677788888888885321           111133456777776 4666555

>TIGR01745 asd_gamma aspartate-semialdehyde dehydrogenase, gamma-proteobacterial

Probab=96.49  E-value=0.031  Score=49.03  Aligned_cols=93  Identities=18%  Similarity=0.252  Sum_probs=53.8

Q ss_pred             CeEEEEcCCChhHHHHHHHHH-HCCC---eEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccccC
Q 023205           57 EKLLVLGGNGFVGSHICREAL-DRGL---TVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGF  132 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll-~~g~---~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~~  132 (286)
                      ++|.|.||||.+|+.+++.|. ++.+   +++.+.-..+...... ..+.....-++.+.    ..+.++|++|.++|..
T Consensus         1 ~~VavvGATG~VG~~ll~~L~~e~~fp~~~~~~~ss~~s~g~~~~-f~~~~~~v~~~~~~----~~~~~vDivffa~g~~   75 (366)
T TIGR01745         1 KNVGLVGWRGMVGSVLMQRMQEERDFDAIRPVFFSTSQLGQAAPS-FGGTTGTLQDAFDI----DALKALDIIITCQGGD   75 (366)
T ss_pred             CeEEEEcCcCHHHHHHHHHHHhCCCCccccEEEEEchhhCCCcCC-CCCCcceEEcCccc----ccccCCCEEEEcCCHH
Confidence            479999999999999999999 4454   4455544322211111 11111122233222    2457899999998651


Q ss_pred             CCcchhhhhhhHHHHHHHHHHHHcCCC-EEEEEec
Q 023205          133 GSNSYMYKINGTANINAIRAASEKGVK-RFVYISA  166 (286)
Q Consensus       133 ~~~~~~~~~~~~~~~~l~~~a~~~~v~-~~v~~Ss  166 (286)
                                  ....+...++++|.. .+|=.||
T Consensus        76 ------------~s~~~~p~~~~aG~~~~VIDnSS   98 (366)
T TIGR01745        76 ------------YTNEIYPKLRESGWQGYWIDAAS   98 (366)
T ss_pred             ------------HHHHHHHHHHhCCCCeEEEECCh
Confidence                        233456667777753 4555555

>COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism]

Probab=96.49  E-value=0.065  Score=44.10  Aligned_cols=73  Identities=15%  Similarity=0.209  Sum_probs=49.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhc--CCCEEEEcccc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD--GVTAVISCVGG  131 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~--~~d~vi~~a~~  131 (286)
                      +++|+|.|||+- ++.+++.|...+..+++.+-.........  .....+.+-..+.+.+.+.++  ++|.||...-|
T Consensus         2 ~~~ilvlGGT~D-ar~la~~L~~~~~~~~~ss~t~~g~~l~~--~~~~~~~~G~l~~e~l~~~l~e~~i~llIDATHP   76 (257)
T COG2099           2 MMRILLLGGTSD-ARALAKKLAAAPVDIILSSLTGYGAKLAE--QIGPVRVGGFLGAEGLAAFLREEGIDLLIDATHP   76 (257)
T ss_pred             CceEEEEeccHH-HHHHHHHhhccCccEEEEEcccccccchh--ccCCeeecCcCCHHHHHHHHHHcCCCEEEECCCh
Confidence            578999999887 89999999998844444333322211111  112255566778888988886  58999988644

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=96.49  E-value=0.064  Score=40.59  Aligned_cols=95  Identities=20%  Similarity=0.255  Sum_probs=60.2

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCCCcccc------------------------cccCC--ceeEEeccCC
Q 023205           58 KLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSLR------------------------DSWAN--NVIWHQGNLL  110 (286)
Q Consensus        58 ~VlVtGatG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~~------------------------~~~~~--~~~~i~~Dl~  110 (286)
                      +|+|.|+ |.+|+.+++.|...|. ++++++.+.-....                        ....+  +++.+..++.
T Consensus         1 ~VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p~v~i~~~~~~~~   79 (143)
T cd01483           1 RVLLVGL-GGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPGVNVTAVPEGIS   79 (143)
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCCCcEEEEEeeecC
Confidence            5899997 9999999999999996 78888766321100                        00112  3444444443


Q ss_pred             CHhHHHHHhcCCCEEEEccccCCCcchhhhhhhHHHHHHHHHHHHcCCCEEEEEec
Q 023205          111 SSDSWKEALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISA  166 (286)
Q Consensus       111 d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss  166 (286)
                      +. ...+.+.++|+||.+...           ......+.+.|++.++ .++..++
T Consensus        80 ~~-~~~~~~~~~diVi~~~d~-----------~~~~~~l~~~~~~~~i-~~i~~~~  122 (143)
T cd01483          80 ED-NLDDFLDGVDLVIDAIDN-----------IAVRRALNRACKELGI-PVIDAGG  122 (143)
T ss_pred             hh-hHHHHhcCCCEEEECCCC-----------HHHHHHHHHHHHHcCC-CEEEEcC
Confidence            32 336677889999988543           1223355678888875 4665555

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.48  E-value=0.054  Score=47.74  Aligned_cols=97  Identities=19%  Similarity=0.189  Sum_probs=63.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCCCcc--cc----------------------cccCC--ceeEEecc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSS--LR----------------------DSWAN--NVIWHQGN  108 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~--~~----------------------~~~~~--~~~~i~~D  108 (286)
                      ..+|+|.|+ |.+|+++++.|...|. ++++++.+.-..  ..                      ....+  +++.+...
T Consensus        28 ~~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~v~~~~~~  106 (355)
T PRK05597         28 DAKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNPDVKVTVSVRR  106 (355)
T ss_pred             CCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCCCcEEEEEEee
Confidence            568999997 9999999999999995 788887764211  00                      01123  34445555


Q ss_pred             CCCHhHHHHHhcCCCEEEEccccCCCcchhhhhhhHHHHHHHHHHHHcCCCEEEEEec
Q 023205          109 LLSSDSWKEALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISA  166 (286)
Q Consensus       109 l~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss  166 (286)
                      ++ .+...+.++++|+||.+....           ..-..+-++|.+.+++ +|+.+.
T Consensus       107 i~-~~~~~~~~~~~DvVvd~~d~~-----------~~r~~~n~~c~~~~ip-~v~~~~  151 (355)
T PRK05597        107 LT-WSNALDELRDADVILDGSDNF-----------DTRHLASWAAARLGIP-HVWASI  151 (355)
T ss_pred             cC-HHHHHHHHhCCCEEEECCCCH-----------HHHHHHHHHHHHcCCC-EEEEEE
Confidence            54 456677889999999996321           1112345677777764 666654

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=96.48  E-value=0.011  Score=47.81  Aligned_cols=68  Identities=25%  Similarity=0.337  Sum_probs=51.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccc-cCCceeEEeccCCCHhHHHHHhcCCCEEEEcc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDS-WANNVIWHQGNLLSSDSWKEALDGVTAVISCV  129 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~-~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a  129 (286)
                      .++|+|.|| |.+|..-++.|++.|.+|++++.+..+..... ...+++++..++.. +    .+.+++.||-+.
T Consensus         9 gk~vlVvGg-G~va~rk~~~Ll~~ga~VtVvsp~~~~~l~~l~~~~~i~~~~~~~~~-~----dl~~~~lVi~at   77 (205)
T TIGR01470         9 GRAVLVVGG-GDVALRKARLLLKAGAQLRVIAEELESELTLLAEQGGITWLARCFDA-D----ILEGAFLVIAAT   77 (205)
T ss_pred             CCeEEEECc-CHHHHHHHHHHHHCCCEEEEEcCCCCHHHHHHHHcCCEEEEeCCCCH-H----HhCCcEEEEECC
Confidence            579999997 99999999999999999999987765433222 12378899888762 2    357888888663

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>cd00300 LDH_like L-lactate dehydrogenase-like enzymes

Probab=96.47  E-value=0.02  Score=49.26  Aligned_cols=101  Identities=13%  Similarity=0.157  Sum_probs=67.1

Q ss_pred             EEEEcCCChhHHHHHHHHHHCC--CeEEEEecCCCccccc------ccC--CceeEEeccCCCHhHHHHHhcCCCEEEEc
Q 023205           59 LLVLGGNGFVGSHICREALDRG--LTVASLSRSGRSSLRD------SWA--NNVIWHQGNLLSSDSWKEALDGVTAVISC  128 (286)
Q Consensus        59 VlVtGatG~iG~~l~~~Ll~~g--~~V~~l~R~~~~~~~~------~~~--~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~  128 (286)
                      |.|.|+ |++|..++..|+..|  .++.+++++.+.....      ...  ...++..+  .|    .+.++++|+||.+
T Consensus         1 i~iiGa-G~VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~~--~~----~~~l~~aDiVIit   73 (300)
T cd00300           1 ITIIGA-GNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVRG--GD----YADAADADIVVIT   73 (300)
T ss_pred             CEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhccccCCCeEEEC--CC----HHHhCCCCEEEEc
Confidence            468896 899999999999988  6899999987542110      001  12222221  12    2478899999999


Q ss_pred             cccCCCc----chhhhhhhHHHHHHHHHHHHcCCCEEEEEec
Q 023205          129 VGGFGSN----SYMYKINGTANINAIRAASEKGVKRFVYISA  166 (286)
Q Consensus       129 a~~~~~~----~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss  166 (286)
                      +|....+    ...+..|......+++..++.+.+-++.+-|
T Consensus        74 ag~p~~~~~~R~~l~~~n~~i~~~~~~~i~~~~p~~~viv~s  115 (300)
T cd00300          74 AGAPRKPGETRLDLINRNAPILRSVITNLKKYGPDAIILVVS  115 (300)
T ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence            9865322    3455677777778888888877654444444

Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot

>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase

Probab=96.47  E-value=0.015  Score=52.36  Aligned_cols=75  Identities=20%  Similarity=0.272  Sum_probs=48.4

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCccccccc------CCceeE-----E-eccCCCHhHHHHHhcCCCE
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSW------ANNVIW-----H-QGNLLSSDSWKEALDGVTA  124 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~------~~~~~~-----i-~~Dl~d~~~~~~~~~~~d~  124 (286)
                      |+|.|.| .|++|..++..|.+.|++|++.++++++......      .++++-     + .+.+.-..+..++++++|+
T Consensus         1 mkI~vIG-lG~~G~~lA~~La~~G~~V~~~d~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~g~l~~~~~~~~~~~~adv   79 (411)
T TIGR03026         1 MKIAVIG-LGYVGLPLAALLADLGHEVTGVDIDQEKVDKLNKGKSPIYEPGLDELLAKALAAGRLRATTDYEDAIRDADV   79 (411)
T ss_pred             CEEEEEC-CCchhHHHHHHHHhcCCeEEEEECCHHHHHHhhcCCCCCCCCCHHHHHHHhhhcCCeEEECCHHHHHhhCCE
Confidence            4799998 5999999999999999999999998754211000      001000     0 0101111234566788999


Q ss_pred             EEEccccC
Q 023205          125 VISCVGGF  132 (286)
Q Consensus       125 vi~~a~~~  132 (286)
                      ||-+.+..
T Consensus        80 vii~vpt~   87 (411)
T TIGR03026        80 IIICVPTP   87 (411)
T ss_pred             EEEEeCCC
Confidence            99998754

All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.

>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional

Probab=96.46  E-value=0.021  Score=51.86  Aligned_cols=74  Identities=18%  Similarity=0.120  Sum_probs=54.6

Q ss_pred             CCCCeEEEEcC----------------CChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHH
Q 023205           54 PPSEKLLVLGG----------------NGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKE  117 (286)
Q Consensus        54 ~~~~~VlVtGa----------------tG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~  117 (286)
                      ..+++||||+|                ||..|.+|++++..+|++|+++.-...-    ..+.+++++..+  ..+++.+
T Consensus       254 l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~~~----~~p~~v~~i~V~--ta~eM~~  327 (475)
T PRK13982        254 LAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPVDL----ADPQGVKVIHVE--SARQMLA  327 (475)
T ss_pred             cCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCcCC----CCCCCceEEEec--CHHHHHH
Confidence            56789999975                8999999999999999999998743221    123567777544  5555554


Q ss_pred             Hhc---CCCEEEEccccCC
Q 023205          118 ALD---GVTAVISCVGGFG  133 (286)
Q Consensus       118 ~~~---~~d~vi~~a~~~~  133 (286)
                      ++.   .+|++|++|+..+
T Consensus       328 av~~~~~~Di~I~aAAVaD  346 (475)
T PRK13982        328 AVEAALPADIAIFAAAVAD  346 (475)
T ss_pred             HHHhhCCCCEEEEeccccc
Confidence            443   3799999999764

>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent

Probab=96.46  E-value=0.042  Score=48.72  Aligned_cols=151  Identities=13%  Similarity=0.020  Sum_probs=84.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC-e----EEE--E--ecCCCcccccc---------cCCceeEEeccCCCHhHHHH
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGL-T----VAS--L--SRSGRSSLRDS---------WANNVIWHQGNLLSSDSWKE  117 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~-~----V~~--l--~R~~~~~~~~~---------~~~~~~~i~~Dl~d~~~~~~  117 (286)
                      +-+|.|+|++|.+|.+++-.|+..+. .    |.+  +  +++.+....+.         ...++.+...   +    .+
T Consensus        44 p~KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~~~v~i~~~---~----y~  116 (387)
T TIGR01757        44 TVNVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLLREVSIGID---P----YE  116 (387)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhcCceEEecC---C----HH
Confidence            45899999999999999999998863 2    333  3  55444321100         0112222211   2    35


Q ss_pred             HhcCCCEEEEccccCCCc----chhhhhhhHHHHHHHHHHHHcC-CCEEEEEec-CC----------cCCCCccccchH-
Q 023205          118 ALDGVTAVISCVGGFGSN----SYMYKINGTANINAIRAASEKG-VKRFVYISA-AD----------FGVANYLLQGYY-  180 (286)
Q Consensus       118 ~~~~~d~vi~~a~~~~~~----~~~~~~~~~~~~~l~~~a~~~~-v~~~v~~Ss-~~----------~~~~~~~~~~y~-  180 (286)
                      .++++|+||.+||....+    .+.+..|......+.+...+.. ..-+|.+-| ..          .+.+....-+-+ 
T Consensus       117 ~~kdaDIVVitAG~prkpg~tR~dll~~N~~I~k~i~~~I~~~a~~~~iviVVsNPvDv~t~v~~k~sg~~~~rviG~gT  196 (387)
T TIGR01757       117 VFEDADWALLIGAKPRGPGMERADLLDINGQIFADQGKALNAVASKNCKVLVVGNPCNTNALIAMKNAPNIPRKNFHALT  196 (387)
T ss_pred             HhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCcHHHHHHHHHHHcCCCcccEEEecc
Confidence            688999999999875322    3556778888888888888843 444444433 10          011111000000 


Q ss_pred             -HHHHHHHHHHHHhCCCcEEEEeeCeeecCCCCC
Q 023205          181 -EGKRAAETELLTRYPYGGVILRPGFIYGTRTVG  213 (286)
Q Consensus       181 -~sK~~~E~~~~~~~g~~~~ilRp~~v~g~~~~~  213 (286)
                       .--...-.++.+..+++..-++-++|+|.....
T Consensus       197 ~LDsaR~r~~LA~~l~v~~~~V~~~~V~GeHGds  230 (387)
T TIGR01757       197 RLDENRAKCQLALKSGKFYTSVSNVTIWGNHSTT  230 (387)
T ss_pred             hhHHHHHHHHHHHHHCcChhHcceeEEEecCCCc
Confidence             001111223444567777777767788876543

This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=96.45  E-value=0.0065  Score=48.97  Aligned_cols=67  Identities=15%  Similarity=0.139  Sum_probs=44.9

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHh-cCCCEEEEccc
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEAL-DGVTAVISCVG  130 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~-~~~d~vi~~a~  130 (286)
                      ..|+|+|+|. |.+|+++++.|.+.|++|++.+++.+........-+.+.+  |.      ++++ .++|+++.++.
T Consensus        27 ~gk~v~I~G~-G~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~~g~~~v--~~------~~l~~~~~Dv~vp~A~   94 (200)
T cd01075          27 EGKTVAVQGL-GKVGYKLAEHLLEEGAKLIVADINEEAVARAAELFGATVV--AP------EEIYSVDADVFAPCAL   94 (200)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCEEE--cc------hhhccccCCEEEeccc
Confidence            3579999997 8999999999999999999988875432111000022222  21      1233 26999998875

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=96.44  E-value=0.045  Score=44.55  Aligned_cols=97  Identities=16%  Similarity=0.190  Sum_probs=61.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCCCc---ccc--------------------cccCC--ceeEEeccC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRS---SLR--------------------DSWAN--NVIWHQGNL  109 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~-~V~~l~R~~~~---~~~--------------------~~~~~--~~~~i~~Dl  109 (286)
                      ..+|+|.|+ |.+|+.+++.|...|. ++++++.+.-.   ...                    ....+  +++.+...+
T Consensus        28 ~~~V~ViG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~lnp~v~v~~~~~~i  106 (212)
T PRK08644         28 KAKVGIAGA-GGLGSNIAVALARSGVGNLKLVDFDVVEPSNLNRQQYFISQIGMPKVEALKENLLEINPFVEIEAHNEKI  106 (212)
T ss_pred             CCCEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEeccccccccEeehhhCCChHHHHHHHHHHHHCCCCEEEEEeeec
Confidence            458999996 9999999999999995 68888877311   000                    00112  344444444


Q ss_pred             CCHhHHHHHhcCCCEEEEccccCCCcchhhhhhhHHHHHHHHHHHHc-CCCEEEEEec
Q 023205          110 LSSDSWKEALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEK-GVKRFVYISA  166 (286)
Q Consensus       110 ~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~l~~~a~~~-~v~~~v~~Ss  166 (286)
                      + .+.+.+.++++|+||.|.-   +.        .....+.+.|.+. ++ .+|+.+.
T Consensus       107 ~-~~~~~~~~~~~DvVI~a~D---~~--------~~r~~l~~~~~~~~~~-p~I~~~~  151 (212)
T PRK08644        107 D-EDNIEELFKDCDIVVEAFD---NA--------ETKAMLVETVLEHPGK-KLVAASG  151 (212)
T ss_pred             C-HHHHHHHHcCCCEEEECCC---CH--------HHHHHHHHHHHHhCCC-CEEEeeh
Confidence            3 3556678889999998831   11        1122446677776 65 4666654

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=96.44  E-value=0.065  Score=44.64  Aligned_cols=97  Identities=19%  Similarity=0.176  Sum_probs=62.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCCCcc--cc----------------------cccCC--ceeEEecc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSS--LR----------------------DSWAN--NVIWHQGN  108 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~--~~----------------------~~~~~--~~~~i~~D  108 (286)
                      ..+|+|.|+ |.+|+.+++.|...|. ++++++.+.-..  ..                      ....+  +++.+...
T Consensus        32 ~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~lnp~v~i~~~~~~  110 (245)
T PRK05690         32 AARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARINPHIAIETINAR  110 (245)
T ss_pred             CCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHCCCCEEEEEecc
Confidence            568999998 9999999999999995 777777653211  00                      00122  34445555


Q ss_pred             CCCHhHHHHHhcCCCEEEEccccCCCcchhhhhhhHHHHHHHHHHHHcCCCEEEEEec
Q 023205          109 LLSSDSWKEALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISA  166 (286)
Q Consensus       109 l~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss  166 (286)
                      ++ .+.+.+.++++|+||.+...   .        .....+-++|.+.++ .+|+.++
T Consensus       111 i~-~~~~~~~~~~~DiVi~~~D~---~--------~~r~~ln~~~~~~~i-p~v~~~~  155 (245)
T PRK05690        111 LD-DDELAALIAGHDLVLDCTDN---V--------ATRNQLNRACFAAKK-PLVSGAA  155 (245)
T ss_pred             CC-HHHHHHHHhcCCEEEecCCC---H--------HHHHHHHHHHHHhCC-EEEEeee
Confidence            43 45677788999999998532   1        112244567777775 4666554

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=96.43  E-value=0.0065  Score=54.77  Aligned_cols=72  Identities=19%  Similarity=0.184  Sum_probs=51.2

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCC-CeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccccC
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRG-LTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGF  132 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g-~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~~  132 (286)
                      ..++|+|.|+ |.+|..+++.|...| .+|++.+|+.++.......-+...+     +.+++.+.+.++|+||.+.+..
T Consensus       179 ~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~~~i-----~~~~l~~~l~~aDvVi~aT~s~  251 (417)
T TIGR01035       179 KGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKELGGEAV-----KFEDLEEYLAEADIVISSTGAP  251 (417)
T ss_pred             cCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCeEe-----eHHHHHHHHhhCCEEEECCCCC
Confidence            4578999997 999999999999999 7899999986542211100011122     2346777888999999997543

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=96.42  E-value=0.017  Score=44.59  Aligned_cols=67  Identities=15%  Similarity=0.323  Sum_probs=45.0

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEcc
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCV  129 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a  129 (286)
                      ..++|+|.|| |-+|...++.|++.|++|++++....+....  ...+++....+.. +    -++++|.||-+.
T Consensus        12 ~~~~vlVvGG-G~va~rka~~Ll~~ga~V~VIsp~~~~~l~~--l~~i~~~~~~~~~-~----dl~~a~lViaaT   78 (157)
T PRK06719         12 HNKVVVIIGG-GKIAYRKASGLKDTGAFVTVVSPEICKEMKE--LPYITWKQKTFSN-D----DIKDAHLIYAAT   78 (157)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCccCHHHHh--ccCcEEEecccCh-h----cCCCceEEEECC
Confidence            3679999997 9999999999999999999886443322222  1244444433322 2    256788888663

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=96.41  E-value=0.016  Score=50.62  Aligned_cols=98  Identities=16%  Similarity=0.084  Sum_probs=58.0

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCce-eEEecc-CCC-HhHHHHHh-cCCCEEEEccc
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNV-IWHQGN-LLS-SDSWKEAL-DGVTAVISCVG  130 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~-~~i~~D-l~d-~~~~~~~~-~~~d~vi~~a~  130 (286)
                      ...+|+|+|++|.+|..+++.+...|.+|++++++.++.......-++ .++..+ -.+ .+.+.+.. .++|+||.+.|
T Consensus       151 ~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~i~~~~~~gvd~v~d~~g  230 (338)
T cd08295         151 KGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKLGFDDAFNYKEEPDLDAALKRYFPNGIDIYFDNVG  230 (338)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCceeEEcCCcccHHHHHHHhCCCCcEEEEECCC
Confidence            356899999999999999998888899999998876542111000122 222211 011 12222222 36899999876


Q ss_pred             cCCCcchhhhhhhHHHHHHHHHHHHcCCCEEEEEec
Q 023205          131 GFGSNSYMYKINGTANINAIRAASEKGVKRFVYISA  166 (286)
Q Consensus       131 ~~~~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss  166 (286)
                      ..            .....++.++..|  +++.++.
T Consensus       231 ~~------------~~~~~~~~l~~~G--~iv~~G~  252 (338)
T cd08295         231 GK------------MLDAVLLNMNLHG--RIAACGM  252 (338)
T ss_pred             HH------------HHHHHHHHhccCc--EEEEecc
Confidence            31            1123345554444  6777765

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=96.40  E-value=0.0083  Score=51.93  Aligned_cols=94  Identities=26%  Similarity=0.259  Sum_probs=57.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCce-eEEeccCCC-HhHHHHHhcCCCEEEEccccCC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNV-IWHQGNLLS-SDSWKEALDGVTAVISCVGGFG  133 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~-~~i~~Dl~d-~~~~~~~~~~~d~vi~~a~~~~  133 (286)
                      ..+|+|+|++|.+|..+++.+...|.+|++++|++++.... ...+. .++  |..+ .+.+.+. .++|+|+++++.. 
T Consensus       163 ~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~-~~~d~v~~~~g~~-  237 (332)
T cd08259         163 GDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKIL-KELGADYVI--DGSKFSEDVKKL-GGADVVIELVGSP-  237 (332)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHH-HHcCCcEEE--ecHHHHHHHHhc-cCCCEEEECCChH-
Confidence            56899999999999999999999999999999875432111 10111 122  2211 1222222 3799999998642 


Q ss_pred             CcchhhhhhhHHHHHHHHHHHHcCCCEEEEEecC
Q 023205          134 SNSYMYKINGTANINAIRAASEKGVKRFVYISAA  167 (286)
Q Consensus       134 ~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~  167 (286)
                                 .....++.....+  ++|.++..
T Consensus       238 -----------~~~~~~~~~~~~g--~~v~~g~~  258 (332)
T cd08259         238 -----------TIEESLRSLNKGG--RLVLIGNV  258 (332)
T ss_pred             -----------HHHHHHHHhhcCC--EEEEEcCC
Confidence                       1123344444333  68877763

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=96.34  E-value=0.046  Score=43.00  Aligned_cols=94  Identities=12%  Similarity=0.073  Sum_probs=59.0

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCC---Ccccc--------------------cccCC--ceeEEeccCCC
Q 023205           58 KLLVLGGNGFVGSHICREALDRGL-TVASLSRSG---RSSLR--------------------DSWAN--NVIWHQGNLLS  111 (286)
Q Consensus        58 ~VlVtGatG~iG~~l~~~Ll~~g~-~V~~l~R~~---~~~~~--------------------~~~~~--~~~~i~~Dl~d  111 (286)
                      +|+|.|+ |.+|+++++.|...|. ++++++.+.   +....                    ....+  +++.+...+. 
T Consensus         1 ~VlViG~-GglGs~ia~~La~~Gvg~i~lvD~D~v~~sNl~Rq~~~~~~vg~~Ka~~~~~~l~~lnp~v~i~~~~~~~~-   78 (174)
T cd01487           1 KVGIAGA-GGLGSNIAVLLARSGVGNLKLVDFDVVEPSNLNRQQYFLSQIGEPKVEALKENLREINPFVKIEAINIKID-   78 (174)
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEEcCcchhcccccHhhCCChHHHHHHHHHHHHCCCCEEEEEEeecC-
Confidence            5899996 9999999999999996 688888874   11000                    00112  3444444443 


Q ss_pred             HhHHHHHhcCCCEEEEccccCCCcchhhhhhhHHHHHHHHHHHHc-CCCEEEEEe
Q 023205          112 SDSWKEALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEK-GVKRFVYIS  165 (286)
Q Consensus       112 ~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~l~~~a~~~-~v~~~v~~S  165 (286)
                      .+.+.+.++++|+||.+...   .        ..-..+.+.+.+. ++ .+|+.+
T Consensus        79 ~~~~~~~l~~~DlVi~~~d~---~--------~~r~~i~~~~~~~~~i-p~i~~~  121 (174)
T cd01487          79 ENNLEGLFGDCDIVVEAFDN---A--------ETKAMLAESLLGNKNK-PVVCAS  121 (174)
T ss_pred             hhhHHHHhcCCCEEEECCCC---H--------HHHHHHHHHHHHHCCC-CEEEEe
Confidence            35677788999999988322   1        1112356666665 65 455544

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=96.33  E-value=0.021  Score=49.30  Aligned_cols=67  Identities=19%  Similarity=0.247  Sum_probs=51.3

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccccC
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGF  132 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~~  132 (286)
                      ..++|.|.| .|.||+.+++.|...|.+|++.+|..+..      +++..+    ...++++++++++|+|+.+....
T Consensus       135 ~g~tvgIvG-~G~IG~~vA~~l~afG~~V~~~~~~~~~~------~~~~~~----~~~~~l~e~l~~aDvvv~~lPlt  201 (312)
T PRK15469        135 EDFTIGILG-AGVLGSKVAQSLQTWGFPLRCWSRSRKSW------PGVQSF----AGREELSAFLSQTRVLINLLPNT  201 (312)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCCCCC------CCceee----cccccHHHHHhcCCEEEECCCCC
Confidence            467999999 59999999999999999999999865431      122111    13456889999999999987654

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=96.32  E-value=0.059  Score=43.29  Aligned_cols=96  Identities=16%  Similarity=0.219  Sum_probs=58.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCCCcc--cc----------------------cccCC--ceeEEecc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSS--LR----------------------DSWAN--NVIWHQGN  108 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~--~~----------------------~~~~~--~~~~i~~D  108 (286)
                      ..+|+|.|+ |.+|+++++.|...|. ++++++.+.-..  ..                      +...+  +++.+...
T Consensus        21 ~s~VlIiG~-gglG~evak~La~~GVg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~lNp~v~i~~~~~~   99 (197)
T cd01492          21 SARILLIGL-KGLGAEIAKNLVLSGIGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRALNPRVKVSVDTDD   99 (197)
T ss_pred             hCcEEEEcC-CHHHHHHHHHHHHcCCCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHHCCCCEEEEEecC
Confidence            458999997 5599999999999995 688877663211  00                      01122  34444444


Q ss_pred             CCCHhHHHHHhcCCCEEEEccccCCCcchhhhhhhHHHHHHHHHHHHcCCCEEEEEec
Q 023205          109 LLSSDSWKEALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISA  166 (286)
Q Consensus       109 l~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss  166 (286)
                      +.  +...+.++++|+||.+...   .        .....+-+.|++.+++ +|+.++
T Consensus       100 ~~--~~~~~~~~~~dvVi~~~~~---~--------~~~~~ln~~c~~~~ip-~i~~~~  143 (197)
T cd01492         100 IS--EKPEEFFSQFDVVVATELS---R--------AELVKINELCRKLGVK-FYATGV  143 (197)
T ss_pred             cc--ccHHHHHhCCCEEEECCCC---H--------HHHHHHHHHHHHcCCC-EEEEEe
Confidence            43  2245567888998877432   1        1222345677888874 666665

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=96.31  E-value=0.0066  Score=52.51  Aligned_cols=73  Identities=21%  Similarity=0.227  Sum_probs=51.1

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCC-CeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccccCC
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRG-LTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFG  133 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g-~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~~~  133 (286)
                      ..++|+|.|+ |.+|..+++.|...| .+|++.+|++++.......-+..     ..+.+++.+.+.++|+||.+.+...
T Consensus       177 ~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~g~~-----~~~~~~~~~~l~~aDvVi~at~~~~  250 (311)
T cd05213         177 KGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKELGGN-----AVPLDELLELLNEADVVISATGAPH  250 (311)
T ss_pred             cCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcCCe-----EEeHHHHHHHHhcCCEEEECCCCCc
Confidence            4679999997 999999999999876 68999999865421111001112     2233457777888999999987543

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain

Probab=96.31  E-value=0.01  Score=43.70  Aligned_cols=71  Identities=17%  Similarity=0.260  Sum_probs=42.7

Q ss_pred             eEEEEcCCChhHHHHHHHHHHC-CCeEEEE-ecCCCcccc-cccCCcee-EEeccCCCHhHHHHHhcCCCEEEEcccc
Q 023205           58 KLLVLGGNGFVGSHICREALDR-GLTVASL-SRSGRSSLR-DSWANNVI-WHQGNLLSSDSWKEALDGVTAVISCVGG  131 (286)
Q Consensus        58 ~VlVtGatG~iG~~l~~~Ll~~-g~~V~~l-~R~~~~~~~-~~~~~~~~-~i~~Dl~d~~~~~~~~~~~d~vi~~a~~  131 (286)
                      +|.|+|++|.+|..+++.|.+. ++++.++ .|+.+.... ....+++. .+..++ +.+.+.  ..++|+||.|.+.
T Consensus         1 ki~iiG~~g~~g~~~~~~l~~~~~~~l~av~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~DvV~~~~~~   75 (122)
T smart00859        1 KVAIVGATGYVGQELLRLLAEHPDFEVVALAASARSAGKRVSEAGPHLKGEVVLEL-EPEDFE--ELAVDIVFLALPH   75 (122)
T ss_pred             CEEEECCCChHHHHHHHHHhcCCCceEEEEEechhhcCcCHHHHCccccccccccc-ccCChh--hcCCCEEEEcCCc
Confidence            4889999999999999999995 6788877 433221111 11112221 111222 223333  2589999998755

The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.

>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.30  E-value=0.024  Score=49.08  Aligned_cols=74  Identities=14%  Similarity=0.157  Sum_probs=49.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc--c--------ccCCcee--EEeccCCCHhHHHHHhcCCC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--D--------SWANNVI--WHQGNLLSSDSWKEALDGVT  123 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~--~--------~~~~~~~--~i~~Dl~d~~~~~~~~~~~d  123 (286)
                      .++|.|.|+ |-+|..++..|+..|++|++.+++++....  .        ....+..  .....+.-..+++++++++|
T Consensus         7 i~~VaVIGa-G~MG~giA~~~a~aG~~V~l~D~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~l~~av~~aD   85 (321)
T PRK07066          7 IKTFAAIGS-GVIGSGWVARALAHGLDVVAWDPAPGAEAALRANVANAWPALERQGLAPGASPARLRFVATIEACVADAD   85 (321)
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCChhhHHhhceecCCHHHHhcCCC
Confidence            468999996 999999999999999999999998653211  0        0000000  00011111234667889999


Q ss_pred             EEEEccc
Q 023205          124 AVISCVG  130 (286)
Q Consensus       124 ~vi~~a~  130 (286)
                      .|+-++.
T Consensus        86 lViEavp   92 (321)
T PRK07066         86 FIQESAP   92 (321)
T ss_pred             EEEECCc
Confidence            9999864

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.29  E-value=0.04  Score=49.04  Aligned_cols=98  Identities=19%  Similarity=0.231  Sum_probs=63.0

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCCCcc------------------c---c---cccCCc--eeEEec
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSS------------------L---R---DSWANN--VIWHQG  107 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~------------------~---~---~~~~~~--~~~i~~  107 (286)
                      ...+|+|.|+ |.+|+++++.|...|. ++++++++.-..                  .   .   ....+.  ++.+..
T Consensus       134 ~~~~VlvvG~-GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~~~  212 (376)
T PRK08762        134 LEARVLLIGA-GGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEAVQE  212 (376)
T ss_pred             hcCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEEEec
Confidence            3568999986 8999999999999996 788888872110                  0   0   001233  334443


Q ss_pred             cCCCHhHHHHHhcCCCEEEEccccCCCcchhhhhhhHHHHHHHHHHHHcCCCEEEEEec
Q 023205          108 NLLSSDSWKEALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISA  166 (286)
Q Consensus       108 Dl~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss  166 (286)
                      .+ +.+.+.+.++++|+||.+....           ..-..+-++|.+.++ .+|+.+.
T Consensus       213 ~~-~~~~~~~~~~~~D~Vv~~~d~~-----------~~r~~ln~~~~~~~i-p~i~~~~  258 (376)
T PRK08762        213 RV-TSDNVEALLQDVDVVVDGADNF-----------PTRYLLNDACVKLGK-PLVYGAV  258 (376)
T ss_pred             cC-ChHHHHHHHhCCCEEEECCCCH-----------HHHHHHHHHHHHcCC-CEEEEEe
Confidence            44 3456777888999999985331           111234577888886 4777665

>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated

Probab=96.27  E-value=0.0059  Score=53.06  Aligned_cols=74  Identities=20%  Similarity=0.243  Sum_probs=47.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc--ccc-----CCceeEEeccCCCHhHHHHHhcCCCEEEEc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSW-----ANNVIWHQGNLLSSDSWKEALDGVTAVISC  128 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~--~~~-----~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~  128 (286)
                      ||+|.|.|+ |.+|..++..|.+.|++|.+.+|+++....  ...     .....+ .....-..+..++++++|+||-+
T Consensus         1 mmkI~iiG~-G~mG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~D~vi~~   78 (325)
T PRK00094          1 MMKIAVLGA-GSWGTALAIVLARNGHDVTLWARDPEQAAEINADRENPRYLPGIKL-PDNLRATTDLAEALADADLILVA   78 (325)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCcccccCCCCcC-CCCeEEeCCHHHHHhCCCEEEEe
Confidence            468999996 999999999999999999999997543211  100     000000 00111112344567789999988


Q ss_pred             ccc
Q 023205          129 VGG  131 (286)
Q Consensus       129 a~~  131 (286)
                      ...
T Consensus        79 v~~   81 (325)
T PRK00094         79 VPS   81 (325)
T ss_pred             CCH
Confidence            654

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=96.27  E-value=0.0092  Score=53.92  Aligned_cols=72  Identities=22%  Similarity=0.313  Sum_probs=51.1

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccccC
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGF  132 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~~  132 (286)
                      ..++|+|.|+ |.+|..+++.|...|. +|++.+|+.++.......-+.     +..+.+++.+.+.++|+||.+.+..
T Consensus       181 ~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g~-----~~~~~~~~~~~l~~aDvVI~aT~s~  253 (423)
T PRK00045        181 SGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEEFGG-----EAIPLDELPEALAEADIVISSTGAP  253 (423)
T ss_pred             cCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCC-----cEeeHHHHHHHhccCCEEEECCCCC
Confidence            4579999996 9999999999999996 899999986542211100011     2223456677788999999997643

>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated

Probab=96.24  E-value=0.017  Score=53.26  Aligned_cols=75  Identities=21%  Similarity=0.206  Sum_probs=48.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccc--------cCC---ceeE-EeccCCCHhHHHHHhcCCC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDS--------WAN---NVIW-HQGNLLSSDSWKEALDGVT  123 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~--------~~~---~~~~-i~~Dl~d~~~~~~~~~~~d  123 (286)
                      .++|.|.|+ |.+|..++..|++.|++|++.+++++......        ...   .... ..+.+.-.+++.++++++|
T Consensus         4 i~kIavIG~-G~MG~~iA~~la~~G~~V~v~D~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~i~~~~~~~ea~~~aD   82 (495)
T PRK07531          4 IMKAACIGG-GVIGGGWAARFLLAGIDVAVFDPHPEAERIIGEVLANAERAYAMLTDAPLPPEGRLTFCASLAEAVAGAD   82 (495)
T ss_pred             cCEEEEECc-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHhhhccchhhhhhceEeeCCHHHHhcCCC
Confidence            468999985 99999999999999999999999865521100        000   0000 0011111234667889999


Q ss_pred             EEEEcccc
Q 023205          124 AVISCVGG  131 (286)
Q Consensus       124 ~vi~~a~~  131 (286)
                      +||-+...
T Consensus        83 ~Vieavpe   90 (495)
T PRK07531         83 WIQESVPE   90 (495)
T ss_pred             EEEEcCcC
Confidence            99988643

>PRK06444 prephenate dehydrogenase; Provisional

Probab=96.24  E-value=0.0099  Score=47.65  Aligned_cols=28  Identities=32%  Similarity=0.516  Sum_probs=26.3

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCeEE
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGLTVA   84 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~~V~   84 (286)
                      |+|.|.||+|.+|+.+++.|.+.|+.|.
T Consensus         1 ~~~~iiG~~G~mG~~~~~~~~~~g~~v~   28 (197)
T PRK06444          1 MMEIIIGKNGRLGRVLCSILDDNGLGVY   28 (197)
T ss_pred             CEEEEEecCCcHHHHHHHHHHhCCCEEE
Confidence            4899999999999999999999999986

>PRK08410 2-hydroxyacid dehydrogenase; Provisional

Probab=96.23  E-value=0.024  Score=49.04  Aligned_cols=66  Identities=20%  Similarity=0.183  Sum_probs=49.7

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccccCC
Q 023205           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFG  133 (286)
Q Consensus        54 ~~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~~~  133 (286)
                      ...++|.|.| .|.||+.+++.+..-|.+|++.+|.....     ...+        ...+++++++.+|+|+.+.....
T Consensus       143 L~gktvGIiG-~G~IG~~vA~~~~~fgm~V~~~d~~~~~~-----~~~~--------~~~~l~ell~~sDvv~lh~Plt~  208 (311)
T PRK08410        143 IKGKKWGIIG-LGTIGKRVAKIAQAFGAKVVYYSTSGKNK-----NEEY--------ERVSLEELLKTSDIISIHAPLNE  208 (311)
T ss_pred             cCCCEEEEEC-CCHHHHHHHHHHhhcCCEEEEECCCcccc-----ccCc--------eeecHHHHhhcCCEEEEeCCCCc
Confidence            4578999999 59999999999988899999998863221     0111        12358889999999988876543

>TIGR00036 dapB dihydrodipicolinate reductase

Probab=96.23  E-value=0.036  Score=46.77  Aligned_cols=32  Identities=28%  Similarity=0.436  Sum_probs=27.4

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHC-CCeEEEEec
Q 023205           57 EKLLVLGGNGFVGSHICREALDR-GLTVASLSR   88 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~-g~~V~~l~R   88 (286)
                      ++|.|.|++|.+|+.+++.+.+. +.++.++..
T Consensus         2 ikV~IiGa~G~MG~~i~~~i~~~~~~elvav~d   34 (266)
T TIGR00036         2 IKVAVAGAAGRMGRELIKAALAAEGLQLVAAFE   34 (266)
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEe
Confidence            58999999999999999999975 678777654

>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate

Probab=96.23  E-value=0.0066  Score=46.93  Aligned_cols=72  Identities=21%  Similarity=0.310  Sum_probs=46.1

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCccc--c-----cccCCceeEEeccCCCHhHHHHHhcCCCEEEEccc
Q 023205           58 KLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSL--R-----DSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVG  130 (286)
Q Consensus        58 ~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~--~-----~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~  130 (286)
                      ||.|.|| |..|.+++..|.++|++|++..|+++...  .     ....+++++-. .+.-..+++++++++|+|+.+..
T Consensus         1 KI~ViGa-G~~G~AlA~~la~~g~~V~l~~~~~~~~~~i~~~~~n~~~~~~~~l~~-~i~~t~dl~~a~~~ad~IiiavP   78 (157)
T PF01210_consen    1 KIAVIGA-GNWGTALAALLADNGHEVTLWGRDEEQIEEINETRQNPKYLPGIKLPE-NIKATTDLEEALEDADIIIIAVP   78 (157)
T ss_dssp             EEEEESS-SHHHHHHHHHHHHCTEEEEEETSCHHHHHHHHHHTSETTTSTTSBEET-TEEEESSHHHHHTT-SEEEE-S-
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhCCCCCCCCCcccCc-ccccccCHHHHhCcccEEEeccc
Confidence            6899997 99999999999999999999999864311  0     01111221111 11112346788899999998864


Q ss_pred             c
Q 023205          131 G  131 (286)
Q Consensus       131 ~  131 (286)
                      .
T Consensus        79 s   79 (157)
T PF01210_consen   79 S   79 (157)
T ss_dssp             G
T ss_pred             H
Confidence            4

This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=96.21  E-value=0.0095  Score=50.43  Aligned_cols=70  Identities=14%  Similarity=0.236  Sum_probs=47.0

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc--cccC--CceeEEeccCCCHhHHHHHhcCCCEEEEccc
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSWA--NNVIWHQGNLLSSDSWKEALDGVTAVISCVG  130 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~--~~~~--~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~  130 (286)
                      ..++++|+|+ |.+|+.++..|.+.|++|++.+|+.++...  +...  ..+...  ++.+     ..+.++|+||++.+
T Consensus       116 ~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~~~~~~--~~~~-----~~~~~~DivInatp  187 (270)
T TIGR00507       116 PNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYGEIQAF--SMDE-----LPLHRVDLIINATS  187 (270)
T ss_pred             cCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcCceEEe--chhh-----hcccCccEEEECCC
Confidence            3578999998 899999999999999999999998654211  1111  111221  1111     23457999999987


Q ss_pred             cC
Q 023205          131 GF  132 (286)
Q Consensus       131 ~~  132 (286)
                      ..
T Consensus       188 ~g  189 (270)
T TIGR00507       188 AG  189 (270)
T ss_pred             CC
Confidence            53

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2

Probab=96.21  E-value=0.075  Score=45.79  Aligned_cols=96  Identities=15%  Similarity=0.184  Sum_probs=61.5

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCCCccc--c----------------------cccCC--ceeEEeccCC
Q 023205           58 KLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSL--R----------------------DSWAN--NVIWHQGNLL  110 (286)
Q Consensus        58 ~VlVtGatG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~--~----------------------~~~~~--~~~~i~~Dl~  110 (286)
                      +|||.|+ |.+|.++++.|...|. ++.+++.+.-...  .                      ....+  +++.+..++.
T Consensus         1 kVlIVGa-GGlG~EiaKnLal~Gvg~ItIvD~D~Ve~sNLnRQflf~~~dVGk~Kaevaa~~l~~lNp~v~V~~~~~~i~   79 (312)
T cd01489           1 KVLVVGA-GGIGCELLKNLVLTGFGEIHIIDLDTIDLSNLNRQFLFRKKHVGKSKAQVAKEAVLSFNPNVKIVAYHANIK   79 (312)
T ss_pred             CEEEECC-CHHHHHHHHHHHHhcCCeEEEEcCCCcchhhcCcCccCChhHcCcHHHHHHHHHHHHHCCCCeEEEEeccCC
Confidence            5899996 9999999999999995 7777776532210  0                      00112  4556666776


Q ss_pred             CHhHHHHHhcCCCEEEEccccCCCcchhhhhhhHHHHHHHHHHHHcCCCEEEEEec
Q 023205          111 SSDSWKEALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISA  166 (286)
Q Consensus       111 d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss  166 (286)
                      +.....+.++++|+|+.+.-.           ...-..+-+.|...++ .+|...+
T Consensus        80 ~~~~~~~f~~~~DvVv~a~Dn-----------~~ar~~in~~c~~~~i-p~I~~gt  123 (312)
T cd01489          80 DPDFNVEFFKQFDLVFNALDN-----------LAARRHVNKMCLAADV-PLIESGT  123 (312)
T ss_pred             CccchHHHHhcCCEEEECCCC-----------HHHHHHHHHHHHHCCC-CEEEEec
Confidence            644345678899999988522           1122244566777775 4665554

UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.19  E-value=0.019  Score=48.95  Aligned_cols=56  Identities=18%  Similarity=0.240  Sum_probs=46.6

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEe-cCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccccC
Q 023205           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLS-RSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGF  132 (286)
Q Consensus        54 ~~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~-R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~~  132 (286)
                      ...++|+|.|.+|.+|..++..|+++|+.|++.. |..                       ++.++.+.+|+||.+.+..
T Consensus       156 ~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~-----------------------~l~e~~~~ADIVIsavg~~  212 (296)
T PRK14188        156 LSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTR-----------------------DLPAVCRRADILVAAVGRP  212 (296)
T ss_pred             CCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCC-----------------------CHHHHHhcCCEEEEecCCh
Confidence            3578999999999999999999999999999884 442                       1466778899999998763

>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)

Probab=96.19  E-value=0.046  Score=42.21  Aligned_cols=58  Identities=24%  Similarity=0.334  Sum_probs=42.3

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccccCC
Q 023205           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFG  133 (286)
Q Consensus        54 ~~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~~~  133 (286)
                      ...|+|+|.|.++.+|+.++..|.++|..|+....+.                      .++++..+.+|+||-++|..+
T Consensus        34 l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T----------------------~~l~~~~~~ADIVVsa~G~~~   91 (160)
T PF02882_consen   34 LEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKT----------------------KNLQEITRRADIVVSAVGKPN   91 (160)
T ss_dssp             TTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTS----------------------SSHHHHHTTSSEEEE-SSSTT
T ss_pred             CCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCC----------------------CcccceeeeccEEeeeecccc
Confidence            3478999999999999999999999999998766553                      225566778888888887643

Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=96.19  E-value=0.0032  Score=53.66  Aligned_cols=70  Identities=14%  Similarity=0.207  Sum_probs=47.8

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCCCcccc--ccc---CCceeEEeccCCCHhHHHHHhcCCCEEEEc
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSLR--DSW---ANNVIWHQGNLLSSDSWKEALDGVTAVISC  128 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~~--~~~---~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~  128 (286)
                      ..++|+|.|+ |..|++++..|.+.|. +|++++|+..+...  +..   .+...+..     .+++.+.++++|+||++
T Consensus       126 ~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~-----~~~~~~~~~~aDiVIna  199 (284)
T PRK12549        126 SLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPAARATA-----GSDLAAALAAADGLVHA  199 (284)
T ss_pred             cCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEe-----ccchHhhhCCCCEEEEC
Confidence            3578999997 8899999999999996 89999998655321  111   11122221     12344566789999999


Q ss_pred             cc
Q 023205          129 VG  130 (286)
Q Consensus       129 a~  130 (286)
                      ..
T Consensus       200 Tp  201 (284)
T PRK12549        200 TP  201 (284)
T ss_pred             Cc
Confidence            53

>PLN02928 oxidoreductase family protein

Probab=96.19  E-value=0.021  Score=50.10  Aligned_cols=78  Identities=17%  Similarity=0.118  Sum_probs=52.8

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccc---cCCceeEEeccCCCHhHHHHHhcCCCEEEEccc
Q 023205           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDS---WANNVIWHQGNLLSSDSWKEALDGVTAVISCVG  130 (286)
Q Consensus        54 ~~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~---~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~  130 (286)
                      ...++|.|.|- |.||+.+++.|...|.+|++.+|...+.....   ....+.-+........++++++.++|+|+.+..
T Consensus       157 l~gktvGIiG~-G~IG~~vA~~l~afG~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ell~~aDiVvl~lP  235 (347)
T PLN02928        157 LFGKTVFILGY-GAIGIELAKRLRPFGVKLLATRRSWTSEPEDGLLIPNGDVDDLVDEKGGHEDIYEFAGEADIVVLCCT  235 (347)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCCCChhhhhhhccccccccccccccCcccCHHHHHhhCCEEEECCC
Confidence            45789999995 99999999999999999999998743211100   001111110011134578899999999999876


Q ss_pred             cC
Q 023205          131 GF  132 (286)
Q Consensus       131 ~~  132 (286)
                      ..
T Consensus       236 lt  237 (347)
T PLN02928        236 LT  237 (347)
T ss_pred             CC
Confidence            54

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.19  E-value=0.032  Score=42.08  Aligned_cols=56  Identities=21%  Similarity=0.215  Sum_probs=47.2

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccccC
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGF  132 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~~  132 (286)
                      ..++|+|.|.+.-+|..++..|.++|..|....++..                      ++++.++++|+|+...|..
T Consensus        27 ~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~----------------------~l~~~v~~ADIVvsAtg~~   82 (140)
T cd05212          27 DGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTI----------------------QLQSKVHDADVVVVGSPKP   82 (140)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCc----------------------CHHHHHhhCCEEEEecCCC
Confidence            4789999999999999999999999999988875421                      3566788999999998764

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=96.17  E-value=0.016  Score=51.94  Aligned_cols=66  Identities=17%  Similarity=0.159  Sum_probs=48.9

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccc
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVG  130 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~  130 (286)
                      ..++|+|+|. |.+|+.+++.|...|.+|++.++++.+..... ..++++.        .++++++++|+||.+.|
T Consensus       211 ~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~A~-~~G~~v~--------~l~eal~~aDVVI~aTG  276 (425)
T PRK05476        211 AGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVDPICALQAA-MDGFRVM--------TMEEAAELGDIFVTATG  276 (425)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCchhhHHHH-hcCCEec--------CHHHHHhCCCEEEECCC
Confidence            4679999996 99999999999999999999999876532211 1233321        14566789999998764

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=96.16  E-value=0.0072  Score=51.48  Aligned_cols=75  Identities=15%  Similarity=0.095  Sum_probs=49.1

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCCCcccc--cccCCceeEEeccCCCHhHHHHHhcCCCEEEEcccc
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSLR--DSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG  131 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~~--~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~  131 (286)
                      ..++|+|.|+ |..|+.++..|.+.|. +|++++|+.++...  +.......+..  +...+++...+.++|+||++.+.
T Consensus       124 ~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~--~~~~~~~~~~~~~~DiVInaTp~  200 (282)
T TIGR01809       124 AGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITR--LEGDSGGLAIEKAAEVLVSTVPA  200 (282)
T ss_pred             CCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCccee--ccchhhhhhcccCCCEEEECCCC
Confidence            3578999996 9999999999999995 79999998655321  11111111111  11123344566789999999765


Q ss_pred             C
Q 023205          132 F  132 (286)
Q Consensus       132 ~  132 (286)
                      .
T Consensus       201 g  201 (282)
T TIGR01809       201 D  201 (282)
T ss_pred             C
Confidence            3

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]

Probab=96.15  E-value=0.024  Score=48.01  Aligned_cols=35  Identities=26%  Similarity=0.437  Sum_probs=32.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCc
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRS   92 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~   92 (286)
                      ++|.++| .|-.|..+++.|+++||+|++.+|++++
T Consensus         1 ~kIafIG-LG~MG~pmA~~L~~aG~~v~v~~r~~~k   35 (286)
T COG2084           1 MKIAFIG-LGIMGSPMAANLLKAGHEVTVYNRTPEK   35 (286)
T ss_pred             CeEEEEc-CchhhHHHHHHHHHCCCEEEEEeCChhh
Confidence            3688888 6999999999999999999999999877

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=96.15  E-value=0.04  Score=47.82  Aligned_cols=96  Identities=23%  Similarity=0.159  Sum_probs=57.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCcee-EEeccC-CCHhH-HHHHh-cCCCEEEEcccc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVI-WHQGNL-LSSDS-WKEAL-DGVTAVISCVGG  131 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~-~i~~Dl-~d~~~-~~~~~-~~~d~vi~~a~~  131 (286)
                      ..+|||+|++|.+|..+++.+...|.+|++++++.++.... ..-++. ++..+- .+.+. +.... +++|+||.+.|.
T Consensus       139 g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~-~~lGa~~vi~~~~~~~~~~~~~~~~~~gvdvv~d~~G~  217 (325)
T TIGR02825       139 GETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYL-KKLGFDVAFNYKTVKSLEETLKKASPDGYDCYFDNVGG  217 (325)
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCCCEEEeccccccHHHHHHHhCCCCeEEEEECCCH
Confidence            56899999999999999998888899999998875442111 111222 222111 11222 22222 368999998764


Q ss_pred             CCCcchhhhhhhHHHHHHHHHHHHcCCCEEEEEec
Q 023205          132 FGSNSYMYKINGTANINAIRAASEKGVKRFVYISA  166 (286)
Q Consensus       132 ~~~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss  166 (286)
                      .            .....++.++..|  +++.++.
T Consensus       218 ~------------~~~~~~~~l~~~G--~iv~~G~  238 (325)
T TIGR02825       218 E------------FSNTVIGQMKKFG--RIAICGA  238 (325)
T ss_pred             H------------HHHHHHHHhCcCc--EEEEecc
Confidence            1            1123344444444  7887765

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like

Probab=96.13  E-value=0.099  Score=43.16  Aligned_cols=97  Identities=11%  Similarity=0.133  Sum_probs=61.1

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCCCcc--cc----------------------cccCC--ceeEEeccCC
Q 023205           58 KLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSS--LR----------------------DSWAN--NVIWHQGNLL  110 (286)
Q Consensus        58 ~VlVtGatG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~--~~----------------------~~~~~--~~~~i~~Dl~  110 (286)
                      +|+|.|+ |.+|..+++.|...|. ++.+++.+.-+.  +.                      ....+  +++.+..++.
T Consensus         1 kVlvvG~-GGlG~eilk~La~~Gvg~i~ivD~D~Ve~sNLnRQflf~~~dvGk~Ka~va~~~l~~~np~v~i~~~~~~i~   79 (234)
T cd01484           1 KVLLVGA-GGIGCELLKNLALMGFGQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKSEVAAEAVNDRNPNCKVVPYQNKVG   79 (234)
T ss_pred             CEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEEcchhhccccCCChhhCChHHHHHHHHHHHHHCCCCEEEEEeccCC
Confidence            5899995 9999999999999995 777777763210  00                      00112  4556666665


Q ss_pred             CHhHH-HHHhcCCCEEEEccccCCCcchhhhhhhHHHHHHHHHHHHcCCCEEEEEecC
Q 023205          111 SSDSW-KEALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAA  167 (286)
Q Consensus       111 d~~~~-~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~  167 (286)
                      +.+.. ...++++|+||.+...           ...-..+-+.|.+.++ .+|..++.
T Consensus        80 ~~~~~~~~f~~~~DvVi~a~Dn-----------~~aR~~ln~~c~~~~i-plI~~g~~  125 (234)
T cd01484          80 PEQDFNDTFFEQFHIIVNALDN-----------IIARRYVNGMLIFLIV-PLIESGTE  125 (234)
T ss_pred             hhhhchHHHHhCCCEEEECCCC-----------HHHHHHHHHHHHHcCC-CEEEEccc
Confidence            44333 4567889999988422           1222345666777775 46666653

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou

>TIGR01142 purT phosphoribosylglycinamide formyltransferase 2

Probab=96.12  E-value=0.029  Score=49.90  Aligned_cols=68  Identities=21%  Similarity=0.330  Sum_probs=53.1

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhc--CCCEEEEcc
Q 023205           58 KLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD--GVTAVISCV  129 (286)
Q Consensus        58 ~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~--~~d~vi~~a  129 (286)
                      +|+|.|+ |..|..+++.+.+.|++|++++.++...... ..+  +.+..|..|.+.+.++.+  ++|+|+...
T Consensus         1 kililG~-g~~~~~l~~aa~~~G~~v~~~d~~~~~~~~~-~ad--~~~~~~~~d~~~l~~~~~~~~id~v~~~~   70 (380)
T TIGR01142         1 RVLLLGS-GELGKEVAIEAQRLGVEVIAVDRYANAPAMQ-VAH--RSYVINMLDGDALRAVIEREKPDYIVPEI   70 (380)
T ss_pred             CEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCCCCchhh-hCc--eEEEcCCCCHHHHHHHHHHhCCCEEEecc
Confidence            5899995 9999999999999999999999886542221 111  345678889998888877  799998654

This enzyme is an alternative to PurN (TIGR00639)

>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.12  E-value=0.048  Score=49.69  Aligned_cols=74  Identities=18%  Similarity=0.174  Sum_probs=51.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCccccccc---CCceeEEeccCCCHhHHHHHhcCCCEEEEccccC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSW---ANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGF  132 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~---~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~~  132 (286)
                      .++|+|+|. |..|..+++.|.++|++|.+.+...........   ..++.+..+...+     ..+.++|.||...|..
T Consensus         5 ~~~~~v~G~-g~~G~~~a~~l~~~g~~v~~~d~~~~~~~~~~l~~~~~gi~~~~g~~~~-----~~~~~~d~vv~spgi~   78 (445)
T PRK04308          5 NKKILVAGL-GGTGISMIAYLRKNGAEVAAYDAELKPERVAQIGKMFDGLVFYTGRLKD-----ALDNGFDILALSPGIS   78 (445)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCchhHHHHhhccCCcEEEeCCCCH-----HHHhCCCEEEECCCCC
Confidence            468999997 689999999999999999999876543211111   1366666655321     2346799999988875


Q ss_pred             CCc
Q 023205          133 GSN  135 (286)
Q Consensus       133 ~~~  135 (286)
                      .+.
T Consensus        79 ~~~   81 (445)
T PRK04308         79 ERQ   81 (445)
T ss_pred             CCC
Confidence            443

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=96.10  E-value=0.13  Score=43.34  Aligned_cols=97  Identities=15%  Similarity=0.208  Sum_probs=62.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCC-CeEEEEecCCCccc--c----------------------cccCCc--eeEEecc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRG-LTVASLSRSGRSSL--R----------------------DSWANN--VIWHQGN  108 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g-~~V~~l~R~~~~~~--~----------------------~~~~~~--~~~i~~D  108 (286)
                      ..+|+|.|+ |.+|+++++.|...| .++++++.+.-...  .                      ....+.  ++.+. +
T Consensus        30 ~s~VlVvG~-GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V~~i~-~  107 (268)
T PRK15116         30 DAHICVVGI-GGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVVD-D  107 (268)
T ss_pred             CCCEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEEEEEe-c
Confidence            468999996 999999999999999 58888877632110  0                      001233  33332 3


Q ss_pred             CCCHhHHHHHhc-CCCEEEEccccCCCcchhhhhhhHHHHHHHHHHHHcCCCEEEEEec
Q 023205          109 LLSSDSWKEALD-GVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISA  166 (286)
Q Consensus       109 l~d~~~~~~~~~-~~d~vi~~a~~~~~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss  166 (286)
                      ..+++...+.+. ++|.||.+....           ..-..+.+.|++.+++ ||.+..
T Consensus       108 ~i~~e~~~~ll~~~~D~VIdaiD~~-----------~~k~~L~~~c~~~~ip-~I~~gG  154 (268)
T PRK15116        108 FITPDNVAEYMSAGFSYVIDAIDSV-----------RPKAALIAYCRRNKIP-LVTTGG  154 (268)
T ss_pred             ccChhhHHHHhcCCCCEEEEcCCCH-----------HHHHHHHHHHHHcCCC-EEEECC
Confidence            334666766664 699999886432           1223568888888864 555544

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=96.10  E-value=0.011  Score=53.05  Aligned_cols=74  Identities=12%  Similarity=0.187  Sum_probs=52.4

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccccCC
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFG  133 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~~~  133 (286)
                      ..++|+|.|+ |.+|+.+++.|.+.|. ++++.+|+.++.....  ..+.  .+.....+++.+.+.++|+||++.+...
T Consensus       180 ~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La--~~~~--~~~~~~~~~l~~~l~~aDiVI~aT~a~~  254 (414)
T PRK13940        180 SSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKIT--SAFR--NASAHYLSELPQLIKKADIIIAAVNVLE  254 (414)
T ss_pred             cCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH--HHhc--CCeEecHHHHHHHhccCCEEEECcCCCC
Confidence            4578999997 9999999999999984 7999999865421110  0100  0122234567788899999999987643

>PRK11559 garR tartronate semialdehyde reductase; Provisional

Probab=96.09  E-value=0.0056  Score=52.53  Aligned_cols=68  Identities=15%  Similarity=0.220  Sum_probs=47.4

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEcccc
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG  131 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~  131 (286)
                      |+++|.|.| .|.+|..+++.|.+.|++|.+.+|++.+.... ...++.+       .++..++++++|+||-+...
T Consensus         1 ~~~~IgviG-~G~mG~~~a~~l~~~g~~v~~~d~~~~~~~~~-~~~g~~~-------~~~~~e~~~~~d~vi~~vp~   68 (296)
T PRK11559          1 MTMKVGFIG-LGIMGKPMSKNLLKAGYSLVVYDRNPEAVAEV-IAAGAET-------ASTAKAVAEQCDVIITMLPN   68 (296)
T ss_pred             CCceEEEEc-cCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHH-HHCCCee-------cCCHHHHHhcCCEEEEeCCC
Confidence            356899999 59999999999999999999999886542111 1111111       12345567789999888653

>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]

Probab=96.09  E-value=0.03  Score=48.60  Aligned_cols=70  Identities=13%  Similarity=0.132  Sum_probs=51.9

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccccCCC
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFGS  134 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~~~~  134 (286)
                      ..++|.|.|. |.||+.+++.|..-|.+|++.++...+.....    .     .....+++++++..+|+|......+..
T Consensus       141 ~gkTvGIiG~-G~IG~~va~~l~afgm~v~~~d~~~~~~~~~~----~-----~~~~~~~Ld~lL~~sDiv~lh~PlT~e  210 (324)
T COG0111         141 AGKTVGIIGL-GRIGRAVAKRLKAFGMKVIGYDPYSPRERAGV----D-----GVVGVDSLDELLAEADILTLHLPLTPE  210 (324)
T ss_pred             cCCEEEEECC-CHHHHHHHHHHHhCCCeEEEECCCCchhhhcc----c-----cceecccHHHHHhhCCEEEEcCCCCcc
Confidence            4789999995 99999999999999999999999543311100    0     112235688999999999888766543

>PRK06487 glycerate dehydrogenase; Provisional

Probab=96.07  E-value=0.026  Score=48.91  Aligned_cols=64  Identities=23%  Similarity=0.164  Sum_probs=49.2

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccccCC
Q 023205           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFG  133 (286)
Q Consensus        54 ~~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~~~  133 (286)
                      ...++|.|.|- |.||+.+++.|..-|.+|++.+|....       ...        +..+++++++.+|+|+.+.....
T Consensus       146 l~gktvgIiG~-G~IG~~vA~~l~~fgm~V~~~~~~~~~-------~~~--------~~~~l~ell~~sDiv~l~lPlt~  209 (317)
T PRK06487        146 LEGKTLGLLGH-GELGGAVARLAEAFGMRVLIGQLPGRP-------ARP--------DRLPLDELLPQVDALTLHCPLTE  209 (317)
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCCCCc-------ccc--------cccCHHHHHHhCCEEEECCCCCh
Confidence            45789999995 999999999999889999999875321       011        12358889999999998876543

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=96.05  E-value=0.012  Score=52.38  Aligned_cols=74  Identities=19%  Similarity=0.262  Sum_probs=56.9

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCC-CeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccccC
Q 023205           54 PPSEKLLVLGGNGFVGSHICREALDRG-LTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGF  132 (286)
Q Consensus        54 ~~~~~VlVtGatG~iG~~l~~~Ll~~g-~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~~  132 (286)
                      ...++|||.|| |-+|.-++++|.++| .+|++++|...+......  .+   .++....+.+...+..+|+||.+.+..
T Consensus       176 L~~~~vlvIGA-Gem~~lva~~L~~~g~~~i~IaNRT~erA~~La~--~~---~~~~~~l~el~~~l~~~DvVissTsa~  249 (414)
T COG0373         176 LKDKKVLVIGA-GEMGELVAKHLAEKGVKKITIANRTLERAEELAK--KL---GAEAVALEELLEALAEADVVISSTSAP  249 (414)
T ss_pred             cccCeEEEEcc-cHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHH--Hh---CCeeecHHHHHHhhhhCCEEEEecCCC
Confidence            35679999997 999999999999999 689999998766321111  11   155666777888999999999997654


Q ss_pred             C
Q 023205          133 G  133 (286)
Q Consensus       133 ~  133 (286)
                      .
T Consensus       250 ~  250 (414)
T COG0373         250 H  250 (414)
T ss_pred             c
Confidence            3

>PRK04207 glyceraldehyde-3-phosphate dehydrogenase; Provisional

Probab=96.04  E-value=0.055  Score=47.42  Aligned_cols=98  Identities=9%  Similarity=0.180  Sum_probs=57.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHC-CCeEEEEecCCCcccc---c-c-cC------Ccee-EEeccCCCHhHHHHHhcCC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDR-GLTVASLSRSGRSSLR---D-S-WA------NNVI-WHQGNLLSSDSWKEALDGV  122 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~-g~~V~~l~R~~~~~~~---~-~-~~------~~~~-~i~~Dl~d~~~~~~~~~~~  122 (286)
                      |.+|.|.|. |.+|+.+++.+.++ +.++.++.-...+...   . . +.      .... +-..++.-.+..++++.++
T Consensus         1 ~ikVaI~G~-GrIGr~va~al~~~~d~eLvav~d~~~~~~~~la~~~G~~~~~~~~~~~~~~~~~~i~V~~~~~el~~~v   79 (341)
T PRK04207          1 MIKVGVNGY-GTIGKRVADAVAAQPDMELVGVAKTKPDYEARVAVEKGYPLYVADPEREKAFEEAGIPVAGTIEDLLEKA   79 (341)
T ss_pred             CeEEEEECC-CHHHHHHHHHHhcCCCcEEEEEECCChHHHHHHHHhcCCCccccCccccccccCCceEEcCChhHhhccC
Confidence            458999999 99999999998876 4688877653221000   0 0 00      0000 0000111112244566789


Q ss_pred             CEEEEccccCCCcchhhhhhhHHHHHHHHHHHHcCCCEEEEEecC
Q 023205          123 TAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAA  167 (286)
Q Consensus       123 d~vi~~a~~~~~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~  167 (286)
                      |+||.|.+..            .....++.+.++| +++|+.++.
T Consensus        80 DVVIdaT~~~------------~~~e~a~~~~~aG-k~VI~~~~~  111 (341)
T PRK04207         80 DIVVDATPGG------------VGAKNKELYEKAG-VKAIFQGGE  111 (341)
T ss_pred             CEEEECCCch------------hhHHHHHHHHHCC-CEEEEcCCC
Confidence            9999997653            1224456777788 577777774

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=96.04  E-value=0.11  Score=46.02  Aligned_cols=98  Identities=19%  Similarity=0.283  Sum_probs=63.0

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCCCcc--cc----------------------cccCC--ceeEEec
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSS--LR----------------------DSWAN--NVIWHQG  107 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~--~~----------------------~~~~~--~~~~i~~  107 (286)
                      ...+|+|.|+ |.+|+++++.|...|. ++++++.+.-..  ..                      ....+  +++.+..
T Consensus        40 ~~~~VliiG~-GglG~~v~~~La~~Gvg~i~ivD~D~ve~sNL~RQ~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~~~  118 (370)
T PRK05600         40 HNARVLVIGA-GGLGCPAMQSLASAGVGTITLIDDDTVDVSNIHRQILFGASDVGRPKVEVAAERLKEIQPDIRVNALRE  118 (370)
T ss_pred             cCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCCEEccccccccccCChhHCCCHHHHHHHHHHHHHCCCCeeEEeee
Confidence            3568999997 9999999999999995 888888763110  00                      00123  3445555


Q ss_pred             cCCCHhHHHHHhcCCCEEEEccccCCCcchhhhhhhHHHHHHHHHHHHcCCCEEEEEec
Q 023205          108 NLLSSDSWKEALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISA  166 (286)
Q Consensus       108 Dl~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss  166 (286)
                      .++ .+.+.+.++++|+||.|....           ..-..+-++|.+.+++ +|+.+.
T Consensus       119 ~i~-~~~~~~~~~~~DlVid~~Dn~-----------~~r~~in~~~~~~~iP-~v~~~~  164 (370)
T PRK05600        119 RLT-AENAVELLNGVDLVLDGSDSF-----------ATKFLVADAAEITGTP-LVWGTV  164 (370)
T ss_pred             ecC-HHHHHHHHhCCCEEEECCCCH-----------HHHHHHHHHHHHcCCC-EEEEEE
Confidence            553 556778899999999985321           1122344667777763 555543

>PLN02948 phosphoribosylaminoimidazole carboxylase

Probab=96.03  E-value=0.051  Score=51.10  Aligned_cols=71  Identities=20%  Similarity=0.234  Sum_probs=54.5

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEc
Q 023205           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISC  128 (286)
Q Consensus        54 ~~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~  128 (286)
                      .++++|+|.|+ |.+|+.++..+.+.|++|++++.+++..... ..  -..+.+|+.|.+.+.++.+.+|+|...
T Consensus        20 ~~~k~IgIIGg-Gqlg~mla~aA~~lG~~Vi~ld~~~~apa~~-~A--D~~~v~~~~D~~~l~~~a~~~dvIt~e   90 (577)
T PLN02948         20 VSETVVGVLGG-GQLGRMLCQAASQMGIKVKVLDPLEDCPASS-VA--ARHVVGSFDDRAAVREFAKRCDVLTVE   90 (577)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCchhh-hC--ceeeeCCCCCHHHHHHHHHHCCEEEEe
Confidence            34679999997 8999999999999999999998876532111 11  134558889999998888889988543

>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated

Probab=96.02  E-value=0.11  Score=46.49  Aligned_cols=97  Identities=20%  Similarity=0.150  Sum_probs=61.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCCCcc--cc----------------------cccCC--ceeEEecc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSS--LR----------------------DSWAN--NVIWHQGN  108 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~--~~----------------------~~~~~--~~~~i~~D  108 (286)
                      ..+|+|.|+ |.+|+.+++.|...|. ++++++.+.-..  ..                      ....+  +++.+..+
T Consensus        42 ~~~VlviG~-GGlGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~i~~~~~~  120 (392)
T PRK07878         42 NARVLVIGA-GGLGSPTLLYLAAAGVGTLGIVEFDVVDESNLQRQVIHGQSDVGRSKAQSARDSIVEINPLVNVRLHEFR  120 (392)
T ss_pred             cCCEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCEecCcccccccccChhcCCChHHHHHHHHHHHhCCCcEEEEEecc
Confidence            458999997 9999999999999995 677777653110  00                      00123  34445555


Q ss_pred             CCCHhHHHHHhcCCCEEEEccccCCCcchhhhhhhHHHHHHHHHHHHcCCCEEEEEec
Q 023205          109 LLSSDSWKEALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISA  166 (286)
Q Consensus       109 l~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss  166 (286)
                      ++ .+...+.++++|+||.|...           ...-..+-++|.+.+++ +|+.+.
T Consensus       121 i~-~~~~~~~~~~~D~Vvd~~d~-----------~~~r~~ln~~~~~~~~p-~v~~~~  165 (392)
T PRK07878        121 LD-PSNAVELFSQYDLILDGTDN-----------FATRYLVNDAAVLAGKP-YVWGSI  165 (392)
T ss_pred             CC-hhHHHHHHhcCCEEEECCCC-----------HHHHHHHHHHHHHcCCC-EEEEEe
Confidence            54 45567788999999988522           11122345677777753 666554

>cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins

Probab=95.98  E-value=0.035  Score=47.75  Aligned_cols=101  Identities=14%  Similarity=0.144  Sum_probs=63.3

Q ss_pred             EEEEcCCChhHHHHHHHHHHCCC-eEEEEecCCCccccc---cc------CCceeEEeccCCCHhHHHHHhcCCCEEEEc
Q 023205           59 LLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSLRD---SW------ANNVIWHQGNLLSSDSWKEALDGVTAVISC  128 (286)
Q Consensus        59 VlVtGatG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~~~---~~------~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~  128 (286)
                      |.|+|+ |.+|..++..|+.++. +|++++++++.....   ..      ....++. .. .|   + +.++++|+||.+
T Consensus         1 I~IIGa-G~vG~~ia~~la~~~l~eV~L~Di~e~~~~g~~~dl~~~~~~~~~~~~I~-~t-~d---~-~~l~dADiVIit   73 (300)
T cd01339           1 ISIIGA-GNVGATLAQLLALKELGDVVLLDIVEGLPQGKALDISQAAPILGSDTKVT-GT-ND---Y-EDIAGSDVVVIT   73 (300)
T ss_pred             CEEECC-CHHHHHHHHHHHhCCCcEEEEEeCCCcHHHHHHHHHHHhhhhcCCCeEEE-Ec-CC---H-HHhCCCCEEEEe
Confidence            578998 9999999999998876 999999986542110   00      0111221 10 12   2 347899999999


Q ss_pred             cccCCCcc----hhhhhhhHHHHHHHHHHHHcCCCEEEEEec
Q 023205          129 VGGFGSNS----YMYKINGTANINAIRAASEKGVKRFVYISA  166 (286)
Q Consensus       129 a~~~~~~~----~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss  166 (286)
                      ++....+.    .....|......+++...+...+.++.+-|
T Consensus        74 ~g~p~~~~~~r~e~~~~n~~i~~~i~~~i~~~~p~~~iIv~s  115 (300)
T cd01339          74 AGIPRKPGMSRDDLLGTNAKIVKEVAENIKKYAPNAIVIVVT  115 (300)
T ss_pred             cCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            98653322    233456666667777777776555543333

Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=95.95  E-value=0.015  Score=50.57  Aligned_cols=96  Identities=27%  Similarity=0.215  Sum_probs=58.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCH---hHHHHHhc--CCCEEEEccc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSS---DSWKEALD--GVTAVISCVG  130 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~---~~~~~~~~--~~d~vi~~a~  130 (286)
                      ..+|||+||+|.+|...++.+.+.|+.+++.+.+.++.. .....+...+ .|..+.   +.+.+...  ++|+|+...|
T Consensus       143 g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~-~~~~lGAd~v-i~y~~~~~~~~v~~~t~g~gvDvv~D~vG  220 (326)
T COG0604         143 GETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLE-LLKELGADHV-INYREEDFVEQVRELTGGKGVDVVLDTVG  220 (326)
T ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHH-HHHhcCCCEE-EcCCcccHHHHHHHHcCCCCceEEEECCC
Confidence            579999999999999999999999977776666654422 1111222211 123332   33444443  5999999976


Q ss_pred             cCCCcchhhhhhhHHHHHHHHHHHHcCCCEEEEEecC
Q 023205          131 GFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAA  167 (286)
Q Consensus       131 ~~~~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~  167 (286)
                      ..            .....++..+..  .+++.+...
T Consensus       221 ~~------------~~~~~l~~l~~~--G~lv~ig~~  243 (326)
T COG0604         221 GD------------TFAASLAALAPG--GRLVSIGAL  243 (326)
T ss_pred             HH------------HHHHHHHHhccC--CEEEEEecC
Confidence            52            111224444434  477777764

>PRK06849 hypothetical protein; Provisional

Probab=95.93  E-value=0.029  Score=50.18  Aligned_cols=37  Identities=16%  Similarity=0.153  Sum_probs=33.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRS   92 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~   92 (286)
                      +|+|||||+...+|..+++.|.+.|++|++++.++..
T Consensus         4 ~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~   40 (389)
T PRK06849          4 KKTVLITGARAPAALELARLFHNAGHTVILADSLKYP   40 (389)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchH
Confidence            6899999999999999999999999999999887543

>TIGR01161 purK phosphoribosylaminoimidazole carboxylase, PurK protein

Probab=95.93  E-value=0.033  Score=49.02  Aligned_cols=66  Identities=18%  Similarity=0.249  Sum_probs=51.6

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEE
Q 023205           58 KLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVIS  127 (286)
Q Consensus        58 ~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~  127 (286)
                      +|+|.|+ |.+|..+++.+.+.|++|++++.++....... .+  +.+.+|+.|.+.+.++.+.+|+|..
T Consensus         1 ~igiiG~-gql~~~l~~aa~~lG~~v~~~d~~~~~p~~~~-ad--~~~~~~~~d~~~i~~~a~~~dvit~   66 (352)
T TIGR01161         1 TVGILGG-GQLGRMLALAARPLGIKVHVLDPDANSPAVQV-AD--HVVLAPFFDPAAIRELAESCDVITF   66 (352)
T ss_pred             CEEEECC-CHHHHHHHHHHHHcCCEEEEECCCCCCChhHh-Cc--eeEeCCCCCHHHHHHHHhhCCEEEe
Confidence            4889997 89999999999999999999988765422111 11  2446788999999999999998743

Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE. This model represents PurK, N5-carboxyaminoimidazole ribonucleotide synthetase, which hydrolyzes ATP and converts AIR to N5-CAIR. PurE converts N5-CAIR to CAIR. In the presence of high concentrations of bicarbonate, PurE is reported able to convert AIR to CAIR directly and without ATP.

>TIGR01771 L-LDH-NAD L-lactate dehydrogenase

Probab=95.92  E-value=0.13  Score=44.21  Aligned_cols=144  Identities=11%  Similarity=0.098  Sum_probs=85.1

Q ss_pred             EEcCCChhHHHHHHHHHHCCC--eEEEEecCCCcccccc---------cCCceeEEeccCCCHhHHHHHhcCCCEEEEcc
Q 023205           61 VLGGNGFVGSHICREALDRGL--TVASLSRSGRSSLRDS---------WANNVIWHQGNLLSSDSWKEALDGVTAVISCV  129 (286)
Q Consensus        61 VtGatG~iG~~l~~~Ll~~g~--~V~~l~R~~~~~~~~~---------~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a  129 (286)
                      |.|+ |.+|..++..|+..+.  ++.+++++.+......         ...++++. +  .+    .+.++++|+||.+|
T Consensus         1 iIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~i~-~--~~----~~~~~daDivVita   72 (299)
T TIGR01771         1 IIGA-GNVGSSTAFALLNQGIADEIVLIDINKDKAEGEAMDLQHAASFLPTPKKIR-S--GD----YSDCKDADLVVITA   72 (299)
T ss_pred             CCCc-CHHHHHHHHHHHhcCCCCEEEEEeCCCChhhHHHHHHHHhhcccCCCeEEe-c--CC----HHHHCCCCEEEECC
Confidence            4565 9999999999998874  7999998765421110         01223333 2  22    35788999999999


Q ss_pred             ccCCCc----chhhhhhhHHHHHHHHHHHHcCCCEEEEEec-CC----------cCCCCccccchHHH--HHHHHHHHHH
Q 023205          130 GGFGSN----SYMYKINGTANINAIRAASEKGVKRFVYISA-AD----------FGVANYLLQGYYEG--KRAAETELLT  192 (286)
Q Consensus       130 ~~~~~~----~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss-~~----------~~~~~~~~~~y~~s--K~~~E~~~~~  192 (286)
                      |....+    ...++.|......+.+..++++.+-++.+-| ..          .+.+....-+.+..  -.....++.+
T Consensus        73 g~~rk~g~~R~dll~~N~~i~~~~~~~i~~~~p~~~vivvsNP~d~~t~~~~~~sg~p~~~viG~gt~LDs~R~~~~la~  152 (299)
T TIGR01771        73 GAPQKPGETRLELVGRNVRIMKSIVPEVVKSGFDGIFLVATNPVDILTYVAWKLSGFPKNRVIGSGTVLDTARLRYLLAE  152 (299)
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHhCCCHHHEEeccchHHHHHHHHHHHH
Confidence            975322    3566788888888888888877654444444 10          01110001111100  1223334555


Q ss_pred             hCCCcEEEEeeCeeecCCCCC
Q 023205          193 RYPYGGVILRPGFIYGTRTVG  213 (286)
Q Consensus       193 ~~g~~~~ilRp~~v~g~~~~~  213 (286)
                      ..+++..-++. .++|.+...
T Consensus       153 ~l~v~~~~V~~-~v~GeHG~s  172 (299)
T TIGR01771       153 KLGVDPQSVHA-YIIGEHGDS  172 (299)
T ss_pred             HhCcCcCeEEE-EEEecCCCc
Confidence            67788777874 588876443

This model represents the NAD-dependent L-lactate dehydrogenases from bacteria and eukaryotes. This enzyme function as as the final step in anaerobic glycolysis. Although lactate dehydrogenases have in some cases been mistaken for malate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of malate dehydrogenases.

>cd08293 PTGR2 Prostaglandin reductase

Probab=95.89  E-value=0.042  Score=48.02  Aligned_cols=96  Identities=17%  Similarity=0.132  Sum_probs=56.8

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCCCcccccccCCcee-EEeccCCC-HhHHHHHh-cCCCEEEEccccC
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSLRDSWANNVI-WHQGNLLS-SDSWKEAL-DGVTAVISCVGGF  132 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~~~~~~~~~~-~i~~Dl~d-~~~~~~~~-~~~d~vi~~a~~~  132 (286)
                      .+|||+||+|.+|..+++.+...|. +|+++++++++.......-+++ ++..+-.+ .+.+.+.. +++|+||.+.+..
T Consensus       156 ~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~~~~~~~~i~~~~~~gvd~vid~~g~~  235 (345)
T cd08293         156 QTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDAAINYKTDNVAERLRELCPEGVDVYFDNVGGE  235 (345)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHCCCCceEEEECCCcH
Confidence            6899999999999999998888898 7999988765421110001222 22211111 12233322 3689999987641


Q ss_pred             CCcchhhhhhhHHHHHHHHHHHHcCCCEEEEEec
Q 023205          133 GSNSYMYKINGTANINAIRAASEKGVKRFVYISA  166 (286)
Q Consensus       133 ~~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss  166 (286)
                                  .....++.++..|  +++.++.
T Consensus       236 ------------~~~~~~~~l~~~G--~iv~~G~  255 (345)
T cd08293         236 ------------ISDTVISQMNENS--HIILCGQ  255 (345)
T ss_pred             ------------HHHHHHHHhccCC--EEEEEee
Confidence                        0112344554444  6787764

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=95.89  E-value=0.077  Score=45.89  Aligned_cols=96  Identities=24%  Similarity=0.186  Sum_probs=59.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHH---Hh--cCCCEEEEccc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKE---AL--DGVTAVISCVG  130 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~---~~--~~~d~vi~~a~  130 (286)
                      ..+|+|+|+++.+|..+++.+...|.+|++++++..+.... ...+... ..|..+.+....   ..  +++|.++++++
T Consensus       167 ~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~d~~i~~~g  244 (342)
T cd08266         167 GETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERA-KELGADY-VIDYRKEDFVREVRELTGKRGVDVVVEHVG  244 (342)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCCCe-EEecCChHHHHHHHHHhCCCCCcEEEECCc
Confidence            56899999999999999999999999999998875432110 0011111 124444333332   22  25899999987


Q ss_pred             cCCCcchhhhhhhHHHHHHHHHHHHcCCCEEEEEecC
Q 023205          131 GFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAA  167 (286)
Q Consensus       131 ~~~~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~  167 (286)
                      ..            .....++..+..  .+++.+++.
T Consensus       245 ~~------------~~~~~~~~l~~~--G~~v~~~~~  267 (342)
T cd08266         245 AA------------TWEKSLKSLARG--GRLVTCGAT  267 (342)
T ss_pred             HH------------HHHHHHHHhhcC--CEEEEEecC
Confidence            41            112234444444  378888874

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>PRK06901 aspartate-semialdehyde dehydrogenase; Provisional

Probab=95.88  E-value=0.071  Score=45.77  Aligned_cols=32  Identities=3%  Similarity=0.036  Sum_probs=25.8

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCC---eEEEEecC
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGL---TVASLSRS   89 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~---~V~~l~R~   89 (286)
                      .+|.| ||||-+|+.+++.|-++++   +++++.-.
T Consensus         4 ~~iAi-GATg~VG~~~l~~Leer~fpv~~l~l~~s~   38 (322)
T PRK06901          4 LNIAI-AAEFELSEKLLEALEQSDLEIEQISIVEIE   38 (322)
T ss_pred             ceEEE-ecCcHHHHHHHHHHHhcCCchhheeecccc
Confidence            47999 9999999999999999886   45555443

>PRK07877 hypothetical protein; Provisional

Probab=95.88  E-value=0.091  Score=50.45  Aligned_cols=97  Identities=18%  Similarity=0.166  Sum_probs=65.9

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCC--eEEEEecCCCcc--cc---------------------cccCC--ceeEEec
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGL--TVASLSRSGRSS--LR---------------------DSWAN--NVIWHQG  107 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~--~V~~l~R~~~~~--~~---------------------~~~~~--~~~~i~~  107 (286)
                      ...+|+|.|. | +|++++..|...|.  ++++++.+.-+.  .+                     ....+  +++.+..
T Consensus       106 ~~~~V~IvG~-G-lGs~~a~~LaraGvvG~l~lvD~D~ve~sNLnRq~~~~~diG~~Kv~~a~~~l~~inp~i~v~~~~~  183 (722)
T PRK07877        106 GRLRIGVVGL-S-VGHAIAHTLAAEGLCGELRLADFDTLELSNLNRVPAGVFDLGVNKAVVAARRIAELDPYLPVEVFTD  183 (722)
T ss_pred             hcCCEEEEEe-c-HHHHHHHHHHHccCCCeEEEEcCCEEcccccccccCChhhcccHHHHHHHHHHHHHCCCCEEEEEec
Confidence            3568999999 8 99999999999983  788877763211  00                     00112  5666666


Q ss_pred             cCCCHhHHHHHhcCCCEEEEccccCCCcchhhhhhhHHHHHHHHHHHHcCCCEEEEEec
Q 023205          108 NLLSSDSWKEALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISA  166 (286)
Q Consensus       108 Dl~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss  166 (286)
                      .++ ++.+.++++++|+|+.|.-.           +..-..+-++|.+.++ .+|+.++
T Consensus       184 ~i~-~~n~~~~l~~~DlVvD~~D~-----------~~~R~~ln~~a~~~~i-P~i~~~~  229 (722)
T PRK07877        184 GLT-EDNVDAFLDGLDVVVEECDS-----------LDVKVLLREAARARRI-PVLMATS  229 (722)
T ss_pred             cCC-HHHHHHHhcCCCEEEECCCC-----------HHHHHHHHHHHHHcCC-CEEEEcC
Confidence            664 77899999999999999532           1122244567788876 4666665

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=95.87  E-value=0.03  Score=48.53  Aligned_cols=95  Identities=20%  Similarity=0.215  Sum_probs=63.3

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccccCCC
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFGS  134 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~~~~  134 (286)
                      +.++|+|+|+ |.+|...++.+...|.+|++++|++++.........-.++...  |++..+.+-+.+|++|.+++ ...
T Consensus       166 pG~~V~I~G~-GGlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~lGAd~~i~~~--~~~~~~~~~~~~d~ii~tv~-~~~  241 (339)
T COG1064         166 PGKWVAVVGA-GGLGHMAVQYAKAMGAEVIAITRSEEKLELAKKLGADHVINSS--DSDALEAVKEIADAIIDTVG-PAT  241 (339)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHcCCeEEEEeCChHHHHHHHHhCCcEEEEcC--CchhhHHhHhhCcEEEECCC-hhh
Confidence            3678999998 5999999999998999999999998764221111122333322  55555555555999999987 211


Q ss_pred             cchhhhhhhHHHHHHHHHHHHcCCCEEEEEec
Q 023205          135 NSYMYKINGTANINAIRAASEKGVKRFVYISA  166 (286)
Q Consensus       135 ~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss  166 (286)
                      .           ...++.++..|  +++.++-
T Consensus       242 ~-----------~~~l~~l~~~G--~~v~vG~  260 (339)
T COG1064         242 L-----------EPSLKALRRGG--TLVLVGL  260 (339)
T ss_pred             H-----------HHHHHHHhcCC--EEEEECC
Confidence            1           13356666665  6777766

>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=95.86  E-value=0.056  Score=46.20  Aligned_cols=36  Identities=25%  Similarity=0.369  Sum_probs=32.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRS   92 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~   92 (286)
                      .++|.|.|+ |.+|..++..|+..|++|++.+++++.
T Consensus         3 ~~kIaViGa-G~mG~~iA~~la~~G~~V~l~d~~~~~   38 (287)
T PRK08293          3 IKNVTVAGA-GVLGSQIAFQTAFHGFDVTIYDISDEA   38 (287)
T ss_pred             ccEEEEECC-CHHHHHHHHHHHhcCCeEEEEeCCHHH
Confidence            358999996 999999999999999999999998653

>PRK07574 formate dehydrogenase; Provisional

Probab=95.86  E-value=0.022  Score=50.55  Aligned_cols=70  Identities=10%  Similarity=0.017  Sum_probs=50.4

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccccC
Q 023205           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGF  132 (286)
Q Consensus        54 ~~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~~  132 (286)
                      ...++|.|.|. |.||+.+++.|...|.+|++.+|...+.... ...++       .-..+++++++.+|+|+.+....
T Consensus       190 L~gktVGIvG~-G~IG~~vA~~l~~fG~~V~~~dr~~~~~~~~-~~~g~-------~~~~~l~ell~~aDvV~l~lPlt  259 (385)
T PRK07574        190 LEGMTVGIVGA-GRIGLAVLRRLKPFDVKLHYTDRHRLPEEVE-QELGL-------TYHVSFDSLVSVCDVVTIHCPLH  259 (385)
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCCCCchhhH-hhcCc-------eecCCHHHHhhcCCEEEEcCCCC
Confidence            34679999995 9999999999999999999999875321100 01111       11235788999999999887553

>PRK14851 hypothetical protein; Provisional

Probab=95.81  E-value=0.12  Score=49.38  Aligned_cols=99  Identities=18%  Similarity=0.160  Sum_probs=63.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCCCcc--cc----------------------cccC--CceeEEecc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSS--LR----------------------DSWA--NNVIWHQGN  108 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~--~~----------------------~~~~--~~~~~i~~D  108 (286)
                      ..+|+|.|+ |.+|+++++.|...|. ++++++.+.-..  .+                      ....  -+++.+...
T Consensus        43 ~~~VlIvG~-GGlGs~va~~Lar~GVG~l~LvD~D~ve~sNLNRQ~~~~~~dvG~~Kv~v~~~~l~~inP~~~I~~~~~~  121 (679)
T PRK14851         43 EAKVAIPGM-GGVGGVHLITMVRTGIGRFHIADFDQFEPVNVNRQFGARVPSFGRPKLAVMKEQALSINPFLEITPFPAG  121 (679)
T ss_pred             cCeEEEECc-CHHHHHHHHHHHHhCCCeEEEEcCCEecccccccCcCcChhhCCCHHHHHHHHHHHHhCCCCeEEEEecC
Confidence            468999995 9999999999999985 666666542110  00                      0011  256666666


Q ss_pred             CCCHhHHHHHhcCCCEEEEccccCCCcchhhhhhhHHHHHHHHHHHHcCCCEEEEEec
Q 023205          109 LLSSDSWKEALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISA  166 (286)
Q Consensus       109 l~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss  166 (286)
                      ++ .+.+.+.++++|+||.+.-...         ...-..+.+.|.+.++. +|..+.
T Consensus       122 i~-~~n~~~~l~~~DvVid~~D~~~---------~~~r~~l~~~c~~~~iP-~i~~g~  168 (679)
T PRK14851        122 IN-ADNMDAFLDGVDVVLDGLDFFQ---------FEIRRTLFNMAREKGIP-VITAGP  168 (679)
T ss_pred             CC-hHHHHHHHhCCCEEEECCCCCc---------HHHHHHHHHHHHHCCCC-EEEeec
Confidence            64 5678889999999998752211         01112356678888874 555553

>PRK05479 ketol-acid reductoisomerase; Provisional

Probab=95.78  E-value=0.028  Score=48.70  Aligned_cols=68  Identities=21%  Similarity=0.213  Sum_probs=47.8

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEcccc
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG  131 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~  131 (286)
                      ..++|.|.|. |.+|..+++.|.+.|++|++..|+..+........++..     .   +..++++++|+|+.+..+
T Consensus        16 ~gktIgIIG~-GsmG~AlA~~L~~sG~~Vvv~~r~~~~s~~~A~~~G~~~-----~---s~~eaa~~ADVVvLaVPd   83 (330)
T PRK05479         16 KGKKVAIIGY-GSQGHAHALNLRDSGVDVVVGLREGSKSWKKAEADGFEV-----L---TVAEAAKWADVIMILLPD   83 (330)
T ss_pred             CCCEEEEEee-HHHHHHHHHHHHHCCCEEEEEECCchhhHHHHHHCCCee-----C---CHHHHHhcCCEEEEcCCH
Confidence            4678999995 999999999999999999988776544222111123321     1   355677888988888653

>PRK07502 cyclohexadienyl dehydrogenase; Validated

Probab=95.78  E-value=0.025  Score=48.83  Aligned_cols=70  Identities=26%  Similarity=0.374  Sum_probs=47.0

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCC--eEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEcccc
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGL--TVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG  131 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~--~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~  131 (286)
                      +.++|.|.| .|.+|..++..|.+.|+  +|++.+|+++.... ....++...   .  ..+..++++++|+||.+...
T Consensus         5 ~~~~I~IIG-~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~-a~~~g~~~~---~--~~~~~~~~~~aDvViiavp~   76 (307)
T PRK07502          5 LFDRVALIG-IGLIGSSLARAIRRLGLAGEIVGADRSAETRAR-ARELGLGDR---V--TTSAAEAVKGADLVILCVPV   76 (307)
T ss_pred             CCcEEEEEe-eCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHH-HHhCCCCce---e--cCCHHHHhcCCCEEEECCCH
Confidence            346899999 69999999999999884  89999998653211 111111000   1  11244567889999999864

>PRK02705 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.78  E-value=0.075  Score=48.62  Aligned_cols=76  Identities=21%  Similarity=0.162  Sum_probs=54.9

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCccccc----ccCCceeEEeccCCCHhHHHHHhcCCCEEEEccccCC
Q 023205           58 KLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRD----SWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFG  133 (286)
Q Consensus        58 ~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~----~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~~~  133 (286)
                      +|+|.|. |..|...++.|.++|++|.+.+++.......    ....++++..+.-.+.+.+...+.+.|.||...|...
T Consensus         2 ~v~viG~-G~sG~s~a~~l~~~G~~V~~~D~~~~~~~~~~~~~l~~~gi~~~~g~~~~~~~~~~~~~~~d~vv~s~gi~~   80 (459)
T PRK02705          2 IAHVIGL-GRSGIAAARLLKAQGWEVVVSDRNDSPELLERQQELEQEGITVKLGKPLELESFQPWLDQPDLVVVSPGIPW   80 (459)
T ss_pred             eEEEEcc-CHHHHHHHHHHHHCCCEEEEECCCCchhhHHHHHHHHHcCCEEEECCccchhhhhHHhhcCCEEEECCCCCC
Confidence            6899995 8899999999999999999999876542221    2234677766554444555566788999999776643


Q ss_pred             C
Q 023205          134 S  134 (286)
Q Consensus       134 ~  134 (286)
                      +
T Consensus        81 ~   81 (459)
T PRK02705         81 D   81 (459)
T ss_pred             C
Confidence            3

>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=95.77  E-value=0.0056  Score=52.35  Aligned_cols=35  Identities=26%  Similarity=0.374  Sum_probs=32.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCc
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRS   92 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~   92 (286)
                      ++|.|.|+ |.+|..++..|++.|++|++.+++++.
T Consensus         2 ~~V~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~~~   36 (288)
T PRK09260          2 EKLVVVGA-GVMGRGIAYVFAVSGFQTTLVDIKQEQ   36 (288)
T ss_pred             cEEEEECc-cHHHHHHHHHHHhCCCcEEEEeCCHHH
Confidence            57999997 999999999999999999999998654

>PTZ00075 Adenosylhomocysteinase; Provisional

Probab=95.76  E-value=0.036  Score=50.26  Aligned_cols=67  Identities=13%  Similarity=0.167  Sum_probs=49.5

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccc
Q 023205           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVG  130 (286)
Q Consensus        54 ~~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~  130 (286)
                      ...++|+|+|. |.||+.+++.|...|.+|++..+++....... ..++++.        .++++++++|+|+.+.+
T Consensus       252 LaGKtVgVIG~-G~IGr~vA~rL~a~Ga~ViV~e~dp~~a~~A~-~~G~~~~--------~leell~~ADIVI~atG  318 (476)
T PTZ00075        252 IAGKTVVVCGY-GDVGKGCAQALRGFGARVVVTEIDPICALQAA-MEGYQVV--------TLEDVVETADIFVTATG  318 (476)
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhHHHHH-hcCceec--------cHHHHHhcCCEEEECCC
Confidence            35789999996 89999999999999999999988865432111 1233322        25667889999998865

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=95.75  E-value=0.25  Score=40.74  Aligned_cols=97  Identities=15%  Similarity=0.164  Sum_probs=60.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCCCcc--cc----------------------cccCC--ceeEEecc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSS--LR----------------------DSWAN--NVIWHQGN  108 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~--~~----------------------~~~~~--~~~~i~~D  108 (286)
                      ..+|+|.|. |.+|+++++.|...|. ++++++.+.-..  ..                      ....+  +++.+...
T Consensus        11 ~~~VlVvG~-GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~~~V~~~~~~   89 (231)
T cd00755          11 NAHVAVVGL-GGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPECEVDAVEEF   89 (231)
T ss_pred             CCCEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCCcEEEEeeee
Confidence            468999996 9999999999999995 777777653110  00                      00122  34444444


Q ss_pred             CCCHhHHHHHhc-CCCEEEEccccCCCcchhhhhhhHHHHHHHHHHHHcCCCEEEEEec
Q 023205          109 LLSSDSWKEALD-GVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISA  166 (286)
Q Consensus       109 l~d~~~~~~~~~-~~d~vi~~a~~~~~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss  166 (286)
                      ++ ++.....+. ++|+||.+....           .....+.+.|++.+++ ||...+
T Consensus        90 i~-~~~~~~l~~~~~D~VvdaiD~~-----------~~k~~L~~~c~~~~ip-~I~s~g  135 (231)
T cd00755          90 LT-PDNSEDLLGGDPDFVVDAIDSI-----------RAKVALIAYCRKRKIP-VISSMG  135 (231)
T ss_pred             cC-HhHHHHHhcCCCCEEEEcCCCH-----------HHHHHHHHHHHHhCCC-EEEEeC
Confidence            43 455666654 699999885321           2223567888888864 554444

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=95.75  E-value=0.034  Score=49.74  Aligned_cols=67  Identities=16%  Similarity=0.148  Sum_probs=48.8

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEcccc
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG  131 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~  131 (286)
                      ..++|+|.|+ |.||..+++.+...|.+|++.++++.+... ....++..+     +   ++++++++|+||.+.|.
T Consensus       201 ~GktVvViG~-G~IG~~va~~ak~~Ga~ViV~d~d~~R~~~-A~~~G~~~~-----~---~~e~v~~aDVVI~atG~  267 (413)
T cd00401         201 AGKVAVVAGY-GDVGKGCAQSLRGQGARVIVTEVDPICALQ-AAMEGYEVM-----T---MEEAVKEGDIFVTTTGN  267 (413)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECChhhHHH-HHhcCCEEc-----c---HHHHHcCCCEEEECCCC
Confidence            4679999996 999999999999999999999888655221 112233332     1   23566789999998653

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional

Probab=95.73  E-value=0.012  Score=50.56  Aligned_cols=35  Identities=17%  Similarity=0.356  Sum_probs=31.6

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCc
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRS   92 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~   92 (286)
                      ++|.|.| .|.+|..+++.|++.|++|++.+|++++
T Consensus         2 ~~Ig~IG-lG~mG~~mA~~l~~~G~~V~v~d~~~~~   36 (296)
T PRK15461          2 AAIAFIG-LGQMGSPMASNLLKQGHQLQVFDVNPQA   36 (296)
T ss_pred             CeEEEEe-eCHHHHHHHHHHHHCCCeEEEEcCCHHH
Confidence            4799998 5999999999999999999999998765

>PRK00141 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.72  E-value=0.064  Score=49.31  Aligned_cols=75  Identities=21%  Similarity=0.175  Sum_probs=51.3

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccccCCC
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFGS  134 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~~~~  134 (286)
                      .+++|+|.| .|..|..+++.|.+.|++|.+.+|+...........++++..++- +.+    .+.++|.||...|...+
T Consensus        14 ~~~~v~v~G-~G~sG~a~a~~L~~~G~~V~~~D~~~~~~~~~l~~~gi~~~~~~~-~~~----~~~~~d~vV~Spgi~~~   87 (473)
T PRK00141         14 LSGRVLVAG-AGVSGRGIAAMLSELGCDVVVADDNETARHKLIEVTGVADISTAE-ASD----QLDSFSLVVTSPGWRPD   87 (473)
T ss_pred             cCCeEEEEc-cCHHHHHHHHHHHHCCCEEEEECCChHHHHHHHHhcCcEEEeCCC-chh----HhcCCCEEEeCCCCCCC
Confidence            356899999 599999999999999999999998654321111123666665422 122    24578999998776543


Q ss_pred             c
Q 023205          135 N  135 (286)
Q Consensus       135 ~  135 (286)
                      .
T Consensus        88 ~   88 (473)
T PRK00141         88 S   88 (473)
T ss_pred             C
Confidence            3

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	286
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	2e-32
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	1e-31
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	1e-31
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	9e-31
1xq6_A	253	Unknown protein; structural genomics, protein stru	7e-27
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	2e-26
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	1e-25
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	2e-22
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	1e-20
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	2e-19
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	3e-19
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	7e-19
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	3e-18
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	1e-17
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	7e-16
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	1e-14
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	1e-14
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	3e-14
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	2e-13
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	1e-12
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	2e-12
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	3e-12
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	5e-12
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	7e-12
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	9e-12
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	3e-11
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	4e-11
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	7e-11
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	1e-10
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	1e-10
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	2e-10
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	4e-10
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	6e-10
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	7e-10
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	2e-09
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	2e-09
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	3e-09
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	4e-09
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	4e-09
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	5e-09
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	5e-09
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	2e-08
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	4e-08
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	1e-07
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	2e-07
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	4e-07
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	4e-07
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	1e-06
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	2e-06
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	2e-06
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	7e-06
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	1e-05
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	2e-05
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	4e-05
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	5e-05
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	1e-04
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	3e-04

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} Length = 219

 Score =  117 bits (296), Expect = 2e-32
 Identities = 36/226 (15%), Positives = 76/226 (33%), Gaps = 38/226 (16%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNL-LSSDSWK 116
           K+ ++G  G VG  + +        + + +R      +    NNV     ++  + +   
Sbjct: 2   KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVE---QVPQYNNVKAVHFDVDWTPEEMA 58

Query: 117 EALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAA-------DF 169
           + L G+ A+I+  G  G +  + K++    +  ++AA +  VKRF+ +S           
Sbjct: 59  KQLHGMDAIINVSGSGGKS--LLKVDLYGAVKLMQAAEKAEVKRFILLSTIFSLQPEKWI 116

Query: 170 GVANYLLQGYYEGKRAAETELLTRYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMV 229
           G     L+ YY  K  A+  L         I++PG +                       
Sbjct: 117 GAGFDALKDYYIAKHFADLYLTKETNLDYTIIQPGALTE--------------------- 155

Query: 230 LQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDPVFPPGIVDV 275
               +  + L  +    +    +  VA               ++ +
Sbjct: 156 ----EEATGLIDINDEVSASNTIGDVADTIKELVMTDHSIGKVISM 197

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} Length = 236

 Score =  116 bits (293), Expect = 1e-31
 Identities = 46/228 (20%), Positives = 83/228 (36%), Gaps = 36/228 (15%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTVASLSRSGR--SSLRDSWANNVIWHQGNLLSSDSW 115
           ++LV+G NG V  ++  E  ++G    ++ R+      LR+  A++++    NL   + +
Sbjct: 23  RVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRERGASDIV--VANL--EEDF 78

Query: 116 KEALDGVTAVISCVGGFGS--NSYMYKINGTANINAIRAASEKGVKRFVYIS---AADFG 170
             A   + AV+   G            I+    I  I+ A ++G+KRF+ +S     D  
Sbjct: 79  SHAFASIDAVVFAAGSGPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVGTVDPD 138

Query: 171 VANYLLQGYYEGKRAAETELL-TRYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMV 229
                ++ Y   KR A+ EL  +   Y   I+RPG +    + G + +            
Sbjct: 139 QGPMNMRHYLVAKRLADDELKRSSLDY--TIVRPGPLSNEESTGKVTVSPH--------- 187

Query: 230 LQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDPVFPPGIVDVHG 277
                            T  +    VAKV               +V  
Sbjct: 188 -------------FSEITRSITRHDVAKVIAELVDQQHTIGKTFEVLN 222

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* Length = 206

 Score =  115 bits (290), Expect = 1e-31
 Identities = 38/214 (17%), Positives = 61/214 (28%), Gaps = 31/214 (14%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKE 117
           K+ + G  G  G     +A+  G  V  L R   S L            G++L +    +
Sbjct: 5   KIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDS-SRLPSEGPRPAHVVVGDVLQAADVDK 63

Query: 118 ALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAA----DFGVAN 173
            + G  AVI  +G     S    +      N + A    GV + V  ++A    D     
Sbjct: 64  TVAGQDAVIVLLGTRNDLSP-TTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKVP 122

Query: 174 YLLQGYYEGKRAAETELLTR-YPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQH 232
             LQ   +        L      Y  V + P  I      G   + L             
Sbjct: 123 PRLQAVTDDHIRMHKVLRESGLKY--VAVMPPHIGDQPLTGAYTVTLD------------ 168

Query: 233 AKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDP 266
                     G   +  ++   +    +R  T  
Sbjct: 169 ----------GRGPSRVISKHDLGHFMLRCLTTD 192

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} Length = 342

 Score =  116 bits (293), Expect = 9e-31
 Identities = 36/240 (15%), Positives = 62/240 (25%), Gaps = 40/240 (16%)

Query: 53  PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSS 112
           P    K  VLG  G +G H  R     G  +  + R   S ++             +L  
Sbjct: 10  PGAHVKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPS-SQIQRLAYLEPECRVAEMLDH 68

Query: 113 DSWKEALDGVTAVISCVGGFGSNS----YMYKIN--GTANINAIRAASEKGVKRFVYIS- 165
              + AL G+  VI   G + S               T       A  +  V R +Y+  
Sbjct: 69  AGLERALRGLDGVIFSAGYYPSRPRRWQEEVASALGQTNPF--YAACLQARVPRILYVGS 126

Query: 166 ---------------AADFGVANYLLQGYYEGKRAAETELLTRYPYGG---VILRPGFIY 207
                             +         Y   K A + +        G   VI  PG + 
Sbjct: 127 AYAMPRHPQGLPGHEGLFYDSLPSGKSSYVLCKWALDEQAR-EQARNGLPVVIGIPGMVL 185

Query: 208 GTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDPV 267
           G          L +  +   ++        ++          ++     +  + A     
Sbjct: 186 G---------ELDIGPTTGRVITAIGN--GEMTHYVAGQRNVIDAAEAGRGLLMALERGR 234

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* Length = 253

 Score =  104 bits (261), Expect = 7e-27
 Identities = 40/237 (16%), Positives = 69/237 (29%), Gaps = 49/237 (20%)

Query: 57  EKLLVLGGNGFVGSHICREALDRG--LTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDS 114
             +LV G +G  G  + ++  +         L RS +   ++          G++  +DS
Sbjct: 5   PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQG--KEKIGGEADVFIGDITDADS 62

Query: 115 WKEALDGVTAVISCVGGFGSNS-------------------YMYKINGTANINAIRAASE 155
              A  G+ A++                             Y  +++     N I AA  
Sbjct: 63  INPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKV 122

Query: 156 KGVKRFVYISA-----ADFGVANYLLQGYYEGKRAAETELLTR-YPYGGVILRPGFIYGT 209
            GVK  V + +      D  +           KR AE  L     PY   I+R G +   
Sbjct: 123 AGVKHIVVVGSMGGTNPDHPLNKLGNGNILVWKRKAEQYLADSGTPY--TIIRAGGLLDK 180

Query: 210 RTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDP 266
                                     + +   +    T  V    VA+V ++A    
Sbjct: 181 EG------------------GVRELLVGKDDELLQTDTKTVPRADVAEVCIQALLFE 219

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} Length = 227

 Score =  102 bits (257), Expect = 2e-26
 Identities = 35/164 (21%), Positives = 55/164 (33%), Gaps = 15/164 (9%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKE 117
           K++++G +GFVGS +  EAL+RG  V ++ R            ++   + ++ S D   E
Sbjct: 6   KIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKI--KIENEHLKVKKADVSSLDEVCE 63

Query: 118 ALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAA---------- 167
              G  AVIS      +N  +Y       +  I    + GV RF+ +  A          
Sbjct: 64  VCKGADAVISAFNPGWNNPDIYDETIKVYLTIIDGVKKAGVNRFLMVGGAGSLFIAPGLR 123

Query: 168 DFGVANYLLQGYYEGKRAAETELLTRYPYGG---VILRPGFIYG 208
                          K   E  L           V   P     
Sbjct: 124 LMDSGEVPENILPGVKALGEFYLNFLMKEKEIDWVFFSPAADMR 167

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A Length = 242

 Score =  100 bits (251), Expect = 1e-25
 Identities = 40/235 (17%), Positives = 77/235 (32%), Gaps = 24/235 (10%)

Query: 58  KLLVLGGNGFVGSHICREALDRGL--TVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSW 115
            + +LG +G  G  + +E L++GL   V  + R  + +  +    NV     +    D +
Sbjct: 20  SVFILGASGETGRVLLKEILEQGLFSKVTLIGRR-KLTFDEEAYKNVNQEVVDFEKLDDY 78

Query: 116 KEALDGVTAVISCVGGF----GSNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGV 171
             A  G      C+G      G+  +  +++    + +   A   G K F  +S+   G 
Sbjct: 79  ASAFQGHDVGFCCLGTTRGKAGAEGF-VRVDRDYVLKSAELAKAGGCKHFNLLSSK--GA 135

Query: 172 ANYLLQGYYEGKRAAETELLTRYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQ 231
                  Y + K   E ++         + RPG +   R              P E +++
Sbjct: 136 DKSSNFLYLQVKGEVEAKVEELKFDRYSVFRPGVLLCDRQE----------SRPGEWLVR 185

Query: 232 HAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDPVFPPG-IVDVHGILRYSQKS 285
                  LP         V V  V +  +     P      +++   I    +  
Sbjct: 186 KFFGS--LPDSWASG-HSVPVVTVVRAMLNNVVRPRDKQMELLENKAIHDLGKAH 237

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} Length = 236

 Score = 92.2 bits (229), Expect = 2e-22
 Identities = 33/220 (15%), Positives = 67/220 (30%), Gaps = 44/220 (20%)

Query: 58  KLLVLGGNGFVGSHICREALDR-GLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWK 116
            +L+LG  G +  H+  +  D+  +     +R   + +   +  N     G++L+  + K
Sbjct: 25  NVLILGAGGQIARHVINQLADKQTIKQTLFARQ-PAKIHKPYPTNSQIIMGDVLNHAALK 83

Query: 117 EALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAA--------- 167
           +A+ G   V + + G   +            + I A     VKR +++ +          
Sbjct: 84  QAMQGQDIVYANLTGEDLD--------IQANSVIAAMKACDVKRLIFVLSLGIYDEVPGK 135

Query: 168 DFGVANYLLQGYYEGKRAAETELLTR-YPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPM 226
                N ++    +  R A   +      Y   ILRP ++     +              
Sbjct: 136 FVEWNNAVIGEPLKPFRRAADAIEASGLEY--TILRPAWLTDEDIIDYELTSRN------ 187

Query: 227 EMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDP 266
                            P     V+   VA +       P
Sbjct: 188 ----------------EPFKGTIVSRKSVAALITDIIDKP 211

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 Length = 215

 Score = 86.6 bits (215), Expect = 1e-20
 Identities = 36/236 (15%), Positives = 77/236 (32%), Gaps = 35/236 (14%)

Query: 58  KLLVLGGNGFVGSHICREALDRG--LTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSW 115
           ++L+ G  G  G H+    L       V + +R   +         +    G L  ++  
Sbjct: 7   RVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAEH-----PRLDNPVGPL--AELL 59

Query: 116 KEALDGVTAVISCVG----GFGSNSYMYKINGTANINAIRAASEKGVKRFVYISA--ADF 169
            +    +     C+G      GS      ++    +   + A E G + ++ +SA  AD 
Sbjct: 60  PQLDGSIDTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADA 119

Query: 170 GVANYLLQGYYEGKRAAETELLTRYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMV 229
             + +    Y   K   E  L  +      I RP  ++G R          ++ +P+   
Sbjct: 120 KSSIF----YNRVKGELEQALQEQGWPQLTIARPSLLFGPRE---EFRLAEILAAPI--- 169

Query: 230 LQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDPVFPPGIVDVHGILRYSQKS 285
                      ++   +   +    +A+   R A +       V+   + +  + S
Sbjct: 170 ---------ARILPGKYH-GIEACDLARALWRLALEEGKGVRFVESDELRKLGKGS 215

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} Length = 224

 Score = 83.5 bits (206), Expect = 2e-19
 Identities = 30/225 (13%), Positives = 57/225 (25%), Gaps = 39/225 (17%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKE 117
           K+ VLG  G  GS I  EA  RG  V ++ R  +   + +                  + 
Sbjct: 2   KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQ---KAADRLGATVATLVKEPLVLTEA 58

Query: 118 ALDGVTAVISCVG-GFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGV----- 171
            LD V AV+  +   +GS      ++   ++  +             + +A   +     
Sbjct: 59  DLDSVDAVVDALSVPWGSGRGYLHLDFATHL--VSLLRNSDTLAVFILGSASLAMPGADH 116

Query: 172 ----------ANYLLQGYYEGKRAAETELLTRYPYGGVILRPGFIYGTRTVGGMKLPLGV 221
                     A+         +      L        + + P   + +            
Sbjct: 117 PMILDFPESAASQPWYDGALYQYYEYQFLQMNANVNWIGISPSEAFPSGPATSYVAGKDT 176

Query: 222 IGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDP 266
                              LVG      +    +A   +     P
Sbjct: 177 ------------------LLVGEDGQSHITTGNMALAILDQLEHP 203

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 Length = 313

 Score = 85.0 bits (210), Expect = 3e-19
 Identities = 38/237 (16%), Positives = 71/237 (29%), Gaps = 37/237 (15%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWAN-------NVIWHQGNLL 110
           ++L++GG G++G  I   ++  G     L R    S  D                + +L 
Sbjct: 6   RVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLD 65

Query: 111 SSDSWKEALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAADFG 170
                 +AL  V  VIS + G          +    +  + A  E G  +    S  +FG
Sbjct: 66  DHQRLVDALKQVDVVISALAGGVL-----SHHILEQLKLVEAIKEAGNIKRFLPS--EFG 118

Query: 171 V-------ANYLLQGYYEGKRAAETEL-LTRYPYGGVILRPGFIYGTRTVGGMKLPLGVI 222
           +       A       +  KR     +     PY    +      G       +L   ++
Sbjct: 119 MDPDIMEHALQPGSITFIDKRKVRRAIEAASIPY--TYVSSNMFAGYFAGSLAQLDGHMM 176

Query: 223 GSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTV--VAKVAVRAATDPVFPPGIVDVHG 277
                       P  ++ + G      + V    V    +++  DP      + +  
Sbjct: 177 -----------PPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTLNKTMYIRP 222

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} Length = 221

 Score = 82.3 bits (203), Expect = 7e-19
 Identities = 31/209 (14%), Positives = 60/209 (28%), Gaps = 9/209 (4%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKE 117
           K+ ++G  G  GS I  EA +RG  V ++ R+    +  +   ++   Q ++   D    
Sbjct: 2   KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNA-GKITQTHK-DINILQKDIF--DLTLS 57

Query: 118 ALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGVANYLLQ 177
            L     V+   G         + + T+  + I   +     R + +  A     +    
Sbjct: 58  DLSDQNVVVDAYGISPDE---AEKHVTSLDHLISVLNGTVSPRLLVVGGAASLQIDEDGN 114

Query: 178 GYYEGKRAAETELLTRYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLS 237
              E K   E             L     +          P  +   P E    +     
Sbjct: 115 TLLESKGLREAPYYPTARAQAKQLEHLKSHQAEFSWTYISPSAMFE-PGERTGDYQIGKD 173

Query: 238 QLPLVGPLFTPPVNVTVVAKVAVRAATDP 266
            L          +++   A   +     P
Sbjct: 174 HLLFGSDG-NSFISMEDYAIAVLDEIERP 201

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 3r14_A* Length = 221

 Score = 80.4 bits (198), Expect = 3e-18
 Identities = 33/234 (14%), Positives = 64/234 (27%), Gaps = 45/234 (19%)

Query: 58  KLLVLGGNGFVGSHICREALDR-GLTVASLSR--SGRSSLRDSWANNVIWHQGNLLSSDS 114
            + +LG  G +   +    L    + +    R    R          V   +G+  +   
Sbjct: 7   YITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPGX 66

Query: 115 WKEALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAADFG---- 170
            ++A+     V                +G+   + ++A S   ++R + +S A       
Sbjct: 67  LEQAVTNAEVVFVGAME----------SGSDMASIVKALSRXNIRRVIGVSMAGLSGEFP 116

Query: 171 ------VANYLLQGYYEGKRAAETELLTRYPYGGVILRPGFIYGTRTVGGMKLPLGVIGS 224
                   + L   Y +G+R A   +L        ILR  ++Y        +L       
Sbjct: 117 VALEKWTFDNLPISYVQGERQAR-NVLRESNLNYTILRLTWLYNDPEXTDYEL------- 168

Query: 225 PMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDPVFPPGIVDVHGI 278
                         +P         V+   V K            P      G+
Sbjct: 169 --------------IPEGAQFNDAQVSREAVVKAIFDILHAADETPFHRTSIGV 208

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 Length = 308

 Score = 80.3 bits (198), Expect = 1e-17
 Identities = 44/237 (18%), Positives = 78/237 (32%), Gaps = 42/237 (17%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSS--------LRDSWANNVIWHQGNL 109
           ++L++G  G++G H+ + +LD G     L R   +S        L    A+      G++
Sbjct: 6   RILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSI 65

Query: 110 LSSDSWKEALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAADF 169
               S  EA+  V  VIS VG              + +N I+A  E G  +  + S  +F
Sbjct: 66  DDHASLVEAVKNVDVVISTVGSLQI---------ESQVNIIKAIKEVGTVKRFFPS--EF 114

Query: 170 GV------ANYLLQGYYEGKRAAETEL-LTRYPYGGVILRPGFIYGTRTVGGMKLPLGVI 222
           G       A    +  +E K      +     PY    +      G          L  +
Sbjct: 115 GNDVDNVHAVEPAKSVFEVKAKVRRAIEAEGIPY--TYVSSNCFAG--------YFLRSL 164

Query: 223 GSPMEMVLQHAKPLSQLPLVGPLFTP--PVNVTVVAKVAVRAATDPVFPPGIVDVHG 277
                       P  ++ ++G        V    +    ++A  DP      + +  
Sbjct: 165 AQAGLTAP----PRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPRTLNKTLYLRL 217

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} Length = 307

 Score = 75.3 bits (185), Expect = 7e-16
 Identities = 33/167 (19%), Positives = 60/167 (35%), Gaps = 29/167 (17%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSW---------ANNVIWHQGN 108
           K+L+LG  G +G HI   ++  G    +L R   ++              +  VI  +G+
Sbjct: 4   KILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGD 63

Query: 109 LLSSDSWKEALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAAD 168
           +   ++  +A+  V  VI   G                +  I+A  E G  +  + S  +
Sbjct: 64  INDHETLVKAIKQVDIVICAAGRLL---------IEDQVKIIKAIKEAGNVKKFFPS--E 112

Query: 169 FGV------ANYLLQGYYEGKRAAETEL-LTRYPYGGVILRPGFIYG 208
           FG+      A   ++  +E K +    +     PY    L      G
Sbjct: 113 FGLDVDRHDAVEPVRQVFEEKASIRRVIEAEGVPY--TYLCCHAFTG 157

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} Length = 321

 Score = 71.9 bits (176), Expect = 1e-14
 Identities = 30/167 (17%), Positives = 50/167 (29%), Gaps = 28/167 (16%)

Query: 57  EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSW--------ANNVIWHQGN 108
           EK+++ GG G++G  + R +L         +R        S         +  V   +G 
Sbjct: 5   EKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGE 64

Query: 109 LLSSDSWKEALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAAD 168
           +   +     L  V  VIS +              ++ I+ I A    G  +    S  D
Sbjct: 65  MEEHEKMVSVLKQVDIVISALPFPMI---------SSQIHIINAIKAAGNIKRFLPS--D 113

Query: 169 FGV------ANYLLQGYYEGKRAAETEL-LTRYPYGGVILRPGFIYG 208
           FG            +   E KR     +     PY    +       
Sbjct: 114 FGCEEDRIKPLPPFESVLEKKRIIRRAIEAAALPY--TYVSANCFGA 158

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* Length = 318

 Score = 71.9 bits (176), Expect = 1e-14
 Identities = 42/233 (18%), Positives = 76/233 (32%), Gaps = 42/233 (18%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTVASLSR--SGRSSLRDSW-ANNVIWHQGNLLSSDS 114
           K+L+ GG G++G+H+ + +L  G      +R  S +++L D + +   I  +G L   + 
Sbjct: 13  KILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELDEHEK 72

Query: 115 WKEALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKG-VKRFVYISAADFGVAN 173
             E +  V  VIS +                    + A    G +KRF+    +DFGV  
Sbjct: 73  LVELMKKVDVVISALAFPQI---------LDQFKILEAIKVAGNIKRFLP---SDFGVEE 120

Query: 174 Y------LLQGYYEGKRAAETEL-LTRYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPM 226
                    +   E KR     +     PY    +               +   +     
Sbjct: 121 DRINALPPFEALIERKRMIRRAIEEANIPY--TYVSANCFA------SYFINYLLRPYD- 171

Query: 227 EMVLQHAKPLSQLPLVGPLFTPPVNVTV--VAKVAVRAATDPVFPPGIVDVHG 277
                   P  ++ + G             +    ++ ATDP     +V    
Sbjct: 172 --------PKDEITVYGTGEAKFAMNYEQDIGLYTIKVATDPRALNRVVIYRP 216

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* Length = 379

 Score = 70.8 bits (174), Expect = 3e-14
 Identities = 46/209 (22%), Positives = 71/209 (33%), Gaps = 30/209 (14%)

Query: 31  STDSNKVDEP-LKVEEAETVNVPPPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRS 89
              +N  D      +E E     P  + K+ + G  GF+ SHI R     G  V +    
Sbjct: 3   MGTTNGTDYGAYTYKELEREQYWPSENLKISITGAGGFIASHIARRLKHEGHYVIAS-DW 61

Query: 90  GRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVI---SCVGGFGSNSY----MYKIN 142
            ++           +H  +L   ++  +  +GV  V    + +GG G        +   N
Sbjct: 62  KKNEHMTEDMFCDEFHLVDLRVMENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNN 121

Query: 143 GTANINAIRAASEKGVKRFVYISAA----DFGVAN----YLLQG----------YYEGKR 184
              + N I AA   G+KRF Y S+A    +F         L +           +   K 
Sbjct: 122 TMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKL 181

Query: 185 AAETELLTRYPYGGV---ILRPGFIYGTR 210
           A E          G+   I R   IYG  
Sbjct: 182 ATEELCKHYNKDFGIECRIGRFHNIYGPF 210

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* Length = 364

 Score = 68.6 bits (167), Expect = 2e-13
 Identities = 37/244 (15%), Positives = 75/244 (30%), Gaps = 43/244 (17%)

Query: 60  LVLGGNGFVGSHICREALDRGL-----TVASLSRSGRSSLRDSWANNVIWHQGNLLSSDS 114
           L++G  G +G+ +               V  ++R  R +  +     + + Q ++   D 
Sbjct: 5   LIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAWHEDNP--INYVQCDISDPDD 62

Query: 115 WKEALDGVTAVISCVGGFGSNSY----MYKINGTANINAIRAASE--KGVKRFVYISAAD 168
            +  L  +T V        +N        + N     N + A       +K     +   
Sbjct: 63  SQAKLSPLTDVTHVFYVTWANRSTEQENCEANSKMFRNVLDAVIPNCPNLKHISLQTGRK 122

Query: 169 FGVANYLLQG---------------------YYEGKRAAETELLTRYPYGGVILRPGFIY 207
             +  +   G                     YY+ +     E+  +      + RPG I+
Sbjct: 123 HYMGPFESYGKIESHDPPYTEDLPRLKYMNFYYDLEDIMLEEVEKKEGLTWSVHRPGNIF 182

Query: 208 GTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPL-----FTPPVNVTVVAKVAVRA 262
           G      M L +G +     +     K    L   G       ++   +  ++A+  + A
Sbjct: 183 GFSPYSMMNL-VGTLCVYAAICKHEGKV---LRFTGCKAAWDGYSDCSDADLIAEHHIWA 238

Query: 263 ATDP 266
           A DP
Sbjct: 239 AVDP 242

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* Length = 346

 Score = 66.6 bits (162), Expect = 1e-12
 Identities = 30/155 (19%), Positives = 51/155 (32%), Gaps = 21/155 (13%)

Query: 48  TVNVPPPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSS------LRDSWANN 101
           TV+  P P  ++L+ G  GF+G  +   +LD       L+R G  S       +      
Sbjct: 2   TVSPVPSPKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKG 61

Query: 102 VIWHQGNLLSSDSWKEALDG--VTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVK 159
            I   G +   ++ ++ L    +  V+S VGG               I  ++A    G  
Sbjct: 62  AIIVYGLINEQEAMEKILKEHEIDIVVSTVGGESI---------LDQIALVKAMKAVGTI 112

Query: 160 RFVYISA----ADFGVANYLLQGYYEGKRAAETEL 190
           +    S      +           Y  KR     +
Sbjct: 113 KRFLPSEFGHDVNRADPVEPGLNMYREKRRVRQLV 147

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A Length = 299

 Score = 65.1 bits (159), Expect = 2e-12
 Identities = 30/151 (19%), Positives = 48/151 (31%), Gaps = 7/151 (4%)

Query: 59  LLVLGGNGFVGSHICREALDRG-LTVASLSRSGRSSLRDSWAN-NVIWHQGNLLSSDSWK 116
           ++V GG G  G  + R  L+ G   V  ++R+ R               QG+       +
Sbjct: 8   VVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQGAEVVQGDQDDQVIME 67

Query: 117 EALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISA--ADFGVANY 174
            AL+G  A       + S S   ++           A   G+   VY          A  
Sbjct: 68  LALNGAYATFIVTNYWESCSQEQEV--KQGKLLADLARRLGLHYVVYSGLENIKKLTAGR 125

Query: 175 LLQGYYEGKRAAETELLTRYPYGGVILRPGF 205
           L   +++GK   E E           +R   
Sbjct: 126 LAAAHFDGKGEVE-EYFRDIGVPMTSVRLPC 155

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} Length = 289

 Score = 64.6 bits (158), Expect = 3e-12
 Identities = 33/220 (15%), Positives = 70/220 (31%), Gaps = 44/220 (20%)

Query: 58  KLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWK 116
            +++ G  G +G+HI  +A+   +       R+    + D W   V   Q +  + +S  
Sbjct: 2   NIMLTGATGHLGTHITNQAIANHIDHFHIGVRN-VEKVPDDWRGKVSVRQLDYFNQESMV 60

Query: 117 EALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYIS--AADFGVANY 174
           EA  G+  V+        +            N + AA + GV   ++I   A       +
Sbjct: 61  EAFKGMDTVVFIPSIIHPSFKRI----PEVENLVYAAKQSGVAHIIFIGYYADQHNNPFH 116

Query: 175 LLQGYYEGKRA-AETELLTRYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHA 233
           +   +    R  + + +     Y    +R    Y                  M+ +  + 
Sbjct: 117 MSPYFGYASRLLSTSGI----DY--TYVRMAM-Y------------------MDPLKPYL 151

Query: 234 KPLSQLPLVGPLFTPPVNVTV-------VAKVAVRAATDP 266
             L     +  L  P  +  +       +A+  +    +P
Sbjct: 152 PELMN---MHKLIYPAGDGRINYITRNDIARGVIAIIKNP 188

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D Length = 287

 Score = 63.8 bits (156), Expect = 5e-12
 Identities = 39/233 (16%), Positives = 69/233 (29%), Gaps = 49/233 (21%)

Query: 59  LLVLGGNGFVGSHICREALDR--GLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWK 116
           + V G  G +G  + +  L +     + ++ R+            V    G+    +S +
Sbjct: 3   IAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNV-EKASTLADQGVEVRHGDYNQPESLQ 61

Query: 117 EALDGVTAV--ISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGVANY 174
           +A  GV+ +  IS         Y   +    + N ++AA + GVK   Y   A    +  
Sbjct: 62  KAFAGVSKLLFIS------GPHYDNTLLIVQHANVVKAARDAGVKHIAYTGYAFAEESII 115

Query: 175 LLQGYYEGKRAAETELLTR---YPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQ 231
            L   +       TE   R    PY    LR    Y                   +  + 
Sbjct: 116 PLAHVH-----LATEYAIRTTNIPY--TFLRNAL-Y------------------TDFFVN 149

Query: 232 HAKPLSQLPLVGPLFTPPVNVTV-------VAKVAVRAATDPVFPPGIVDVHG 277
               L      G + T   +  V       +A  A    T+        ++  
Sbjct: 150 EG--LRASTESGAIVTNAGSGIVNSVTRNELALAAATVLTEEGHENKTYNLVS 200

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} Length = 313

 Score = 63.7 bits (156), Expect = 7e-12
 Identities = 43/182 (23%), Positives = 69/182 (37%), Gaps = 31/182 (17%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTVA---SLSRSGRSSLRDSWANNVIWHQGNLLSSDS 114
            ++V GG GF+GSH+  + L     +    +LS SG     +         + +L + D 
Sbjct: 3   LIVVTGGAGFIGSHVV-DKLSESNEIVVIDNLS-SGN---EEFVNEAARLVKADLAADD- 56

Query: 115 WKEALDGVTAVI-----SCVGGFGSN-SYMYKINGTANINAIRAASEKGVKRFVYIS-AA 167
            K+ L G   V        V     N   +Y+ N  A    + A  + GV R V+ S + 
Sbjct: 57  IKDYLKGAEEVWHIAANPDVRIGAENPDEIYRNNVLATYRLLEAMRKAGVSRIVFTSTST 116

Query: 168 DFGVANYL----------LQGYYEGKRAAETELLTRYP--YG--GVILRPGFIYGTRTVG 213
            +G A  +          +  Y   K A E  L+  Y   +     I R   + G R+  
Sbjct: 117 VYGEAKVIPTPEDYPTHPISLYGASKLACE-ALIESYCHTFDMQAWIYRFANVIGRRSTH 175

Query: 214 GM 215
           G+
Sbjct: 176 GV 177

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} Length = 267

 Score = 62.7 bits (153), Expect = 9e-12
 Identities = 32/187 (17%), Positives = 50/187 (26%), Gaps = 41/187 (21%)

Query: 56  SEKLLVLGGNGFVGSHICREALDRGLTVASLSR--SGRSSLRDSWANNVIWHQGNLLSSD 113
             +LLV G  G VGS I          V        G +        +      +L  + 
Sbjct: 2   LNRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAA------EAHEEIVACDLADAQ 55

Query: 114 SWKEALDGVTAVI---------SCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYI 164
           +  + +     +I                +N     I G  N+    AA   G  R V+ 
Sbjct: 56  AVHDLVKDCDGIIHLGGVSVERPWNDILQAN-----IIGAYNL--YEAARNLGKPRIVFA 108

Query: 165 S-AADFGVANYLL----------QGYY-EGKRAAETELLTRY--PYG--GVILRPGFIYG 208
           S     G                   Y   K   E +L + Y   +    + +R G  + 
Sbjct: 109 SSNHTIGYYPRTTRIDTEVPRRPDSLYGLSKCFGE-DLASLYYHKFDIETLNIRIGSCFP 167

Query: 209 TRTVGGM 215
                 M
Sbjct: 168 KPKDARM 174

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A Length = 342

 Score = 61.9 bits (151), Expect = 3e-11
 Identities = 35/125 (28%), Positives = 51/125 (40%), Gaps = 15/125 (12%)

Query: 54  PPSEKLLVLGGNGFVGSHICREALDRGL----TVASLSRSG--RSSLRDSWANNVIWHQ- 106
           P    +LV G NGFV SH+  + L+ G     T  S S+    +      +         
Sbjct: 9   PEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVV 68

Query: 107 GNLLSSDSWKEALDGVTAVI---SCVGGFGSNSYMYK--INGTANINAIRAAS-EKGVKR 160
            ++L   ++ E + G   V    S V        +    I GT  +NA+RAA+    VKR
Sbjct: 69  EDMLKQGAYDEVIKGAAGVAHIASVVSFSNKYDEVVTPAIGGT--LNALRAAAATPSVKR 126

Query: 161 FVYIS 165
           FV  S
Sbjct: 127 FVLTS 131

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* Length = 267

 Score = 61.2 bits (149), Expect = 4e-11
 Identities = 19/110 (17%), Positives = 34/110 (30%), Gaps = 6/110 (5%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKE 117
           +LLV G  G +G  +          +     S           N    Q +L  +++   
Sbjct: 5   RLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPAGP----NEECVQCDLADANAVNA 60

Query: 118 ALDGVTAVI--SCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYIS 165
            + G   ++    +        + + N     N   AA   G  R V+ S
Sbjct: 61  MVAGCDGIVHLGGISVEKPFEQILQGNIIGLYNLYEAARAHGQPRIVFAS 110

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} Length = 311

 Score = 60.7 bits (148), Expect = 7e-11
 Identities = 37/179 (20%), Positives = 56/179 (31%), Gaps = 41/179 (22%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTVASL--SRSGRSSLRDSWANNVIWHQGNLLSSDSW 115
           K+ V GG GF+G ++     + G T   L  S   ++       N+  +   +    D  
Sbjct: 4   KIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA------INDYEYRVSDYTLED-L 56

Query: 116 KEALDGVTAVI---------SCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYIS- 165
              L+ V AV+           +  F  N        T N+    A  E  +   VY S 
Sbjct: 57  INQLNDVDAVVHLAATRGSQGKISEFHDN-----EILTQNL--YDACYENNISNIVYAST 109

Query: 166 AADFGVANYL----------LQGYYEGKRAAETELLTRYP--YG--GVILRPGFIYGTR 210
            + +     L             Y   K A E  +   Y    G     LR   +YG  
Sbjct: 110 ISAYSDETSLPWNEKELPLPDLMYGVSKLACE-HIGNIYSRKKGLCIKNLRFAHLYGFN 167

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} PDB: 3icp_A* 3aw9_A* Length = 312

 Score = 59.9 bits (146), Expect = 1e-10
 Identities = 40/182 (21%), Positives = 68/182 (37%), Gaps = 31/182 (17%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTVA---SLSRSGRSSLRDSWANNVIWHQGNLLSSDS 114
           +++V GG GF+GSH+  + ++ G  V    +LS SGR   R+    +   H  +L     
Sbjct: 2   RIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLS-SGR---REFVNPSAELHVRDLKDYSW 57

Query: 115 WKEALDGVTAVI-----SCVGGFGSN-SYMYKINGTANINAIRAASEKGVKRFVYIS-AA 167
                     V        V    +     +  N  A  N +  A + GV+  V+ S + 
Sbjct: 58  GAGI--KGDVVFHFAANPEVRLSTTEPIVHFNENVVATFNVLEWARQTGVRTVVFASSST 115

Query: 168 DFGVANYLLQG----------YYEGKRAAETELLTRYP--YG--GVILRPGFIYGTRTVG 213
            +G A+ +             Y   K A E  +   Y   +G   + +R   + G R   
Sbjct: 116 VYGDADVIPTPEEEPYKPISVYGAAKAAGE-VMCATYARLFGVRCLAVRYANVVGPRLRH 174

Query: 214 GM 215
           G+
Sbjct: 175 GV 176

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A Length = 338

 Score = 60.0 bits (146), Expect = 1e-10
 Identities = 32/131 (24%), Positives = 52/131 (39%), Gaps = 18/131 (13%)

Query: 50  NVPPPPSEKLLVLGGNGFVGSHICREALDRGL----TVASLSRSGR-SSLRDSW-ANNVI 103
              P   +   V+GG GFV S + +  L +G     TV       + S L +     ++ 
Sbjct: 3   TQHPIGKKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQELGDLK 62

Query: 104 WHQGNLLSSDSWKEALDGVTAVI---SCVGGFGSNSY---MYK--INGTANINAIRAASE 155
             + +L    S++  + G   V    + V  F S      M K  I G  N+  ++A + 
Sbjct: 63  IFRADLTDELSFEAPIAGCDFVFHVATPV-HFASEDPENDMIKPAIQGVVNV--MKACTR 119

Query: 156 -KGVKRFVYIS 165
            K VKR +  S
Sbjct: 120 AKSVKRVILTS 130

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} Length = 286

 Score = 59.3 bits (144), Expect = 2e-10
 Identities = 35/166 (21%), Positives = 56/166 (33%), Gaps = 26/166 (15%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKE 117
           K+L+ G  G +G  + R    +G  V  L RS            V     ++   D+   
Sbjct: 5   KILIAGC-GDLGLELARRLTAQGHEVTGLRRSA-----QPMPAGVQTLIADVTRPDTLAS 58

Query: 118 ALDG-VTAVISCVG-GFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGVANY- 174
            +      ++ CV     S+ +          N + A     ++   ++S+   GV  Y 
Sbjct: 59  IVHLRPEILVYCVAASEYSDEHYRLSYVEGLRNTLSALEGAPLQHVFFVSST--GV--YG 114

Query: 175 ------------LLQGYYEGKRAAETELLTRYPYGGVILRPGFIYG 208
                        +   + GKR  E E L    Y   ILR   IYG
Sbjct: 115 QEVEEWLDEDTPPIAKDFSGKRMLEAEALLA-AYSSTILRFSGIYG 159

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* Length = 286

 Score = 58.1 bits (141), Expect = 4e-10
 Identities = 38/232 (16%), Positives = 67/232 (28%), Gaps = 52/232 (22%)

Query: 60  LVLGGNGFVGSHICREALDR--GLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKE 117
            + G  G +G ++    +       + ++ R+  +  +   A  +   Q +     +   
Sbjct: 3   AITGATGQLGHYVIESLMKTVPASQIVAIVRNP-AKAQALAAQGITVRQADYGDEAALTS 61

Query: 118 ALDGVTAV--ISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGVANYL 175
           AL GV  +  IS                  + N I AA   GVK   Y S      +   
Sbjct: 62  ALQGVEKLLLISSSEVGQR--------APQHRNVINAAKAAGVKFIAYTSLLHADTSPLG 113

Query: 176 LQGYYEGKRAAETELLTR---YPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQH 232
           L   +      ETE +       Y   +LR G+ Y                   E  L  
Sbjct: 114 LADEH-----IETEKMLADSGIVY--TLLRNGW-Y------------------SENYLAS 147

Query: 233 AKPLSQLPLVGPLFTPPVNVTV-------VAKVAVRAATDPVFPPGIVDVHG 277
           A    +    G       +  +        A  A R  ++      + ++ G
Sbjct: 148 APAALE---HGVFIGAAGDGKIASATRADYAAAAARVISEAGHEGKVYELAG 196

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} Length = 478

 Score = 58.4 bits (141), Expect = 6e-10
 Identities = 44/232 (18%), Positives = 67/232 (28%), Gaps = 66/232 (28%)

Query: 46  AETVNVPPPPSEKLLVL--GGNGFVGSHICREALDR---GLTVASLSRSGR--------- 91
           A  VN+P P  E   VL  G  GF+G ++  E L R      +  L R+           
Sbjct: 61  ATAVNLPGPSPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLE 120

Query: 92  -----------SSLRDSWANNVIWHQGNL------LSSDSWKEALDGVTAVISCVGG--- 131
                         ++  A+ +    G+       L    W+   + V  ++        
Sbjct: 121 KTFDSGDPELLRHFKELAADRLEVVAGDKSEPDLGLDQPMWRRLAETVDLIVDS--AAMV 178

Query: 132 -FGSNSYMYKIN--GTANINAIRAASEKGVKRFVYIS----------------------A 166
                  ++  N  GTA +  IR A    +K F Y+S                      +
Sbjct: 179 NAFPYHELFGPNVAGTAEL--IRIALTTKLKPFTYVSTADVGAAIEPSAFTEDADIRVIS 236

Query: 167 ADFGVANYLLQGYYEGKRAAETELL---TRYPYGGVILRPGFIYGTRTVGGM 215
               V      GY   K A E  L            + R G I    +  G 
Sbjct: 237 PTRTVDGGWAGGYGTSKWAGEVLLREANDLCALPVAVFRCGMILADTSYAGQ 288

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* Length = 311

 Score = 57.9 bits (141), Expect = 7e-10
 Identities = 34/130 (26%), Positives = 58/130 (44%), Gaps = 25/130 (19%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTVA---SLSRSGRSSLRDSWANNVIWHQGNLLSSDS 114
           ++LV GG GF+GSHI  + L RGL VA   +L+   R ++       V + + +L   + 
Sbjct: 2   RVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRENVPK----GVPFFRVDLRDKEG 57

Query: 115 WKEALDG--VTAVI-----SCVGGFGSNS-----YMYKINGTANINAIRAASEKGVKRFV 162
            + A      T V      + V      S       +++N    +N + A  + GV++ V
Sbjct: 58  VERAFREFRPTHVSHQAAQASVK----VSVEDPVLDFEVNLLGGLNLLEACRQYGVEKLV 113

Query: 163 YIS--AADFG 170
           + S   A +G
Sbjct: 114 FASTGGAIYG 123

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} Length = 322

 Score = 56.5 bits (137), Expect = 2e-09
 Identities = 28/129 (21%), Positives = 51/129 (39%), Gaps = 26/129 (20%)

Query: 57  EKLLVLGGNGFVGSHICREALDRGLTV-ASLSRSGRSSLRDSWANNVIW----------- 104
            ++ V GG GF+GS I +  L+ G +V  ++    R+        + +            
Sbjct: 2   GRVCVTGGTGFLGSWIIKSLLENGYSVNTTI----RADPERKRDVSFLTNLPGASEKLHF 57

Query: 105 HQGNLLSSDSWKEALDGVTAVISCVGGFGSNS-----YMYK--INGTANINAIRAASE-K 156
              +L + DS+  A++G   +                 + K  ++G   I  ++A    K
Sbjct: 58  FNADLSNPDSFAAAIEGCVGIFHTASPIDFAVSEPEEIVTKRTVDGALGI--LKACVNSK 115

Query: 157 GVKRFVYIS 165
            VKRF+Y S
Sbjct: 116 TVKRFIYTS 124

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* Length = 330

 Score = 56.4 bits (137), Expect = 2e-09
 Identities = 27/129 (20%), Positives = 52/129 (40%), Gaps = 15/129 (11%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTVA---SLSRSGRSSLRDSWANNVIWHQGNLLSSDS 114
           ++L+ GG G +GS++    L +G  +    + +   R  L       +   +G++  +  
Sbjct: 22  RILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLP--PVAGLSVIEGSVTDAGL 79

Query: 115 WKEALDG--VTAVI-----SCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYIS-A 166
            + A D    T V+            +      + G+  IN  +AAS+ GVKR +    A
Sbjct: 80  LERAFDSFKPTHVVHSAAAYKDPDDWAEDAATNVQGS--INVAKAASKAGVKRLLNFQTA 137

Query: 167 ADFGVANYL 175
             +G    +
Sbjct: 138 LCYGRPATV 146

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} Length = 333

 Score = 56.1 bits (136), Expect = 3e-09
 Identities = 43/185 (23%), Positives = 69/185 (37%), Gaps = 36/185 (19%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTVA---SLSRSGRSSLRDSWANNVIWHQGNLLSSDS 114
           K+ + G  G +GSHI    L+RG  V    + +   R  L+D    N+ + +G++     
Sbjct: 23  KVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKDH--PNLTFVEGSIADHAL 80

Query: 115 WKEALDGV--TAVI----SCVGGFGSNSYMYKINGTANI----NAIRAASEKGVKRFVYI 164
             + +  +   AV+    S       +   +  +   N     N ++AA +  V RFVY 
Sbjct: 81  VNQLIGDLQPDAVVHTAAS-----YKDPDDWYNDTLTNCVGGSNVVQAAKKNNVGRFVYF 135

Query: 165 S-AADFGV------------ANYLLQGYYEGKRAAETEL-LTRYPYGGVILRPGFIYGTR 210
             A  +GV             N     Y   K A E  L  +   +  V  R   + G R
Sbjct: 136 QTALCYGVKPIQQPVRLDHPRNPANSSYAISKSANEDYLEYSGLDF--VTFRLANVVGPR 193

Query: 211 TVGGM 215
            V G 
Sbjct: 194 NVSGP 198

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* Length = 352

 Score = 55.7 bits (135), Expect = 4e-09
 Identities = 42/191 (21%), Positives = 69/191 (36%), Gaps = 46/191 (24%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTV-----------ASLSRSGRSSLRDSWANNVIWHQ 106
             L+ G  GF+GS++    L     V            +L    RS + +   +N  + Q
Sbjct: 29  VWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEV-RSLVSEKQWSNFKFIQ 87

Query: 107 GNLLSSDSWKEALDGVTAVI--SCVGG-----------FGSNSYMYKINGTANINAIRAA 153
           G++ + D    A  GV  V+  + +G              +N     I+G  N+  + AA
Sbjct: 88  GDIRNLDDCNNACAGVDYVLHQAALGSVPRSINDPITSNATN-----IDGFLNM--LIAA 140

Query: 154 SEKGVKRFVYI-SAADFGVANYL----------LQGYYEGKRAAETELLT-RYPYG--GV 199
            +  V+ F Y  S++ +G    L          L  Y   K   E         YG   +
Sbjct: 141 RDAKVQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNELYADVFSRCYGFSTI 200

Query: 200 ILRPGFIYGTR 210
            LR   ++G R
Sbjct: 201 GLRYFNVFGRR 211

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* Length = 352

 Score = 55.6 bits (134), Expect = 4e-09
 Identities = 26/158 (16%), Positives = 51/158 (32%), Gaps = 12/158 (7%)

Query: 53  PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWAN--NVIWHQGNLL 110
               + + V+G  G  G+ + R A   G  V +   S +  + +      NV   QG LL
Sbjct: 2   AQQKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLL 61

Query: 111 SS-DSWKEALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKG-VKRFVYISAAD 168
           ++        +G          F + +           +   AA   G ++ ++Y S  D
Sbjct: 62  NNVPLMDTLFEGAHLA------FINTTSQAGDEIAIGKDLADAAKRAGTIQHYIYSSMPD 115

Query: 169 FGVAN-YLLQGYYEGKRAAETELLTRYPYGGVILRPGF 205
             +   +     +  K   E   + +       +  G 
Sbjct: 116 HSLYGPWPAVPMWAPKFTVE-NYVRQLGLPSTFVYAGI 152

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* Length = 337

 Score = 55.3 bits (134), Expect = 5e-09
 Identities = 32/125 (25%), Positives = 52/125 (41%), Gaps = 17/125 (13%)

Query: 56  SEKLLVLGGNGFVGSHICREALDRGL----TVASLSRSGR-SSLRDSW--ANNVIWHQGN 108
           SE + V G +GF+GS +    L+RG     TV   +   +   L D      ++   + +
Sbjct: 5   SETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKAD 64

Query: 109 LLSSDSWKEALDGVTAVISCVGGFGSNS-----YMYK--INGTANINAIRAASE-KGVKR 160
           L    S+ EA+ G T V          S      + K  I G   I  +++ +  K V+R
Sbjct: 65  LADEGSFDEAIKGCTGVFHVATPMDFESKDPENEVIKPTIEGMLGI--MKSCAAAKTVRR 122

Query: 161 FVYIS 165
            V+ S
Sbjct: 123 LVFTS 127

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A Length = 369

 Score = 55.3 bits (133), Expect = 5e-09
 Identities = 21/163 (12%), Positives = 47/163 (28%), Gaps = 27/163 (16%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKE 117
            +++ G  GFVG ++  +                        ++ I+        +  + 
Sbjct: 2   NIVITGAKGFVGKNLKADLTSTT-------------------DHHIFEVHRQTKEEELES 42

Query: 118 ALDGVTAVI--SCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGVANYL 175
           AL     ++  + V     +      N +   + +   +    K  + +S++     +  
Sbjct: 43  ALLKADFIVHLAGVNRPEHDKEFSLGNVSYLDHVLDILTRNTKKPAILLSSSIQATQDNP 102

Query: 176 LQGYYEGKRAAETELLT---RYPYGGVILRPGFIYGTRTVGGM 215
              Y E K   E  L      Y     I R   ++G       
Sbjct: 103 ---YGESKLQGEQLLREYAEEYGNTVYIYRWPNLFGKWCKPNY 142

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* Length = 351

 Score = 53.4 bits (129), Expect = 2e-08
 Identities = 25/132 (18%), Positives = 48/132 (36%), Gaps = 32/132 (24%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTV-----------ASLSRSGRSSLRDSWANNVIWHQ 106
             L+ G  GF+GS++  + L     V            +L         + W+    + +
Sbjct: 27  TWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWS-RFCFIE 85

Query: 107 GNLLSSDSWKEALDGVTAVI--SCVGG-----------FGSNSYMYKINGTANINAIRAA 153
           G++    + ++ + GV  V+  + +G              +N     I G  NI  + AA
Sbjct: 86  GDIRDLTTCEQVMKGVDHVLHQAALGSVPRSIVDPITTNATN-----ITGFLNI--LHAA 138

Query: 154 SEKGVKRFVYIS 165
               V+ F Y +
Sbjct: 139 KNAQVQSFTYAA 150

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} Length = 321

 Score = 52.5 bits (127), Expect = 4e-08
 Identities = 31/176 (17%), Positives = 53/176 (30%), Gaps = 29/176 (16%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTVA---SLSRSGRSSLRDSWANNVIWHQGNLLSSDS 114
           ++L+ GG GF+G H+ R  +  G  V     L                 + +  +L  + 
Sbjct: 9   RILITGGAGFIGGHLARALVASGEEVTVLDDLR-VPP---MIPPEGTGKFLEKPVL--EL 62

Query: 115 WKEALDGVTAVI--SCVGG---FGSNSYMYKINGTANINAIRAASEKGVKRFVYIS-AAD 168
            +  L  V  V   +              Y  N  +  + +   +  GV + V  S    
Sbjct: 63  EERDLSDVRLVYHLASHKSVPRSFKQPLDYLDNVDSGRHLLALCTSVGVPKVVVGSTCEV 122

Query: 169 FGVANYLLQG----------YYEGKRAAETELLT-RYPYGG---VILRPGFIYGTR 210
           +G A+ L             Y   K   E      +         I+R   +YG  
Sbjct: 123 YGQADTLPTPEDSPLSPRSPYAASKVGLEMVAGAHQRASVAPEVGIVRFFNVYGPG 178

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} Length = 372

 Score = 51.3 bits (123), Expect = 1e-07
 Identities = 34/184 (18%), Positives = 70/184 (38%), Gaps = 35/184 (19%)

Query: 58  KLLVLGGNGFVGSHICREALDRG---LTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDS 114
           K+L+LG NGF+G H+ +  L+     +    +       L       + + +G++  +  
Sbjct: 26  KVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVKH--ERMHFFEGDITINKE 83

Query: 115 WKEALDG-VTAVISCVGGFGSNSYMY------KINGTANINAIRAASEKGVKRFVYISAA 167
           W E        ++  V      +Y+       +++  AN+  +R+A + G K  V+ S +
Sbjct: 84  WVEYHVKKCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG-KHLVFPSTS 142

Query: 168 D-FGVANY---------LLQG--------YYEGKRAAETELLTRYPYGGV---ILRPGFI 206
           + +G+            L  G        Y   K+  +  ++  Y   G+   + RP   
Sbjct: 143 EVYGMCADEQFDPDASALTYGPINKPRWIYACSKQLMDR-VIWGYGMEGLNFTLFRPFNW 201

Query: 207 YGTR 210
            G  
Sbjct: 202 IGPG 205

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* Length = 377

 Score = 50.4 bits (121), Expect = 2e-07
 Identities = 33/209 (15%), Positives = 61/209 (29%), Gaps = 45/209 (21%)

Query: 58  KLLVLGGNGFVGSHICREALDRG----LTVASLSRSGRSSLRDSWANNVIWHQGNLLSSD 113
            ++V+GG GFVGS++ +  L+ G      V +L  + + ++ D     V + + ++    
Sbjct: 34  NVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVPDH--PAVRFSETSITDDA 91

Query: 114 SWKEALDGVTAVI----------SCVGGFGSNSYMYKINGTANINAIRAASE-KGVKRFV 162
                 D    V           S       +    + N    +         K +K+ V
Sbjct: 92  LLASLQDEYDYVFHLATYHGNQSSIHDPLADH----ENNTLTTLKLYERLKHFKRLKKVV 147

Query: 163 YI-SAADFGVANYLLQG----------------YYEGKRAAETELLTRY---PYG--GVI 200
           Y  +        +                    Y   K   E    + Y    +    V 
Sbjct: 148 YSAAGCSIAEKTFDDAKATEETDIVSLHNNDSPYSMSKIFGEF--YSVYYHKQHQLPTVR 205

Query: 201 LRPGFIYGTRTVGGMKLPLGVIGSPMEMV 229
            R   +YG   + G     G   +    V
Sbjct: 206 ARFQNVYGPGEILGAGRWRGTPATVWRNV 234

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} Length = 330

 Score = 49.4 bits (119), Expect = 4e-07
 Identities = 28/125 (22%), Positives = 53/125 (42%), Gaps = 16/125 (12%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTVA---SLSRSGRSSLRDSWANNVIWHQGNLLSSDS 114
            +L+ GG G++GSH  ++ +D GL+V    +L      ++ +       ++ G+L     
Sbjct: 3   SILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHEDAITE----GAKFYNGDLRDKAF 58

Query: 115 WKEALD--GVTAVI-----SCVGGFGSNSYMYKINGTAN-INAIRAASEKGVKRFVYIS- 165
            ++      + AV+     S VG        Y  N     +  +    E  V +F++ S 
Sbjct: 59  LRDVFTQENIEAVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFIFSST 118

Query: 166 AADFG 170
           AA +G
Sbjct: 119 AATYG 123

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} Length = 516

 Score = 49.7 bits (119), Expect = 4e-07
 Identities = 12/69 (17%), Positives = 20/69 (28%), Gaps = 11/69 (15%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKE 117
            + + G  G VG  +  +    G  V  L R               W        +   +
Sbjct: 149 TVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPK------PGKRFWD-----PLNPASD 197

Query: 118 ALDGVTAVI 126
            LDG   ++
Sbjct: 198 LLDGADVLV 206

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* Length = 317

 Score = 48.1 bits (115), Expect = 1e-06
 Identities = 21/119 (17%), Positives = 45/119 (37%), Gaps = 12/119 (10%)

Query: 60  LVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEAL 119
           LV G +G +G+ +     ++      ++    S +       + +   ++ + D    A+
Sbjct: 3   LVTGSSGQIGTELVPYLAEKYGKKNVIA----SDIVQRDTGGIKFITLDVSNRDEIDRAV 58

Query: 120 D--GVTAVISCVGGFGSNS-----YMYKINGTANINAIRAASEKGVKRFVYIS-AADFG 170
           +   + A+    G   +         YK+N     N + AA +  V++ V  S    FG
Sbjct: 59  EKYSIDAIFHLAGILSAKGEKDPALAYKVNMNGTYNILEAAKQHRVEKVVIPSTIGVFG 117

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} Length = 286

 Score = 47.2 bits (112), Expect = 2e-06
 Identities = 33/171 (19%), Positives = 55/171 (32%), Gaps = 37/171 (21%)

Query: 56  SEKLLVLGGNGFVGSHICREALDRGLTVASLSRS--GRSSLRDSWANNVIWHQGNLLSSD 113
           +  LL  G  G+    + R    +G  +   SR+     ++R S A  ++W         
Sbjct: 5   TGTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRASGAEPLLW--------P 55

Query: 114 SWKEALDGVTAVISCVG-GFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGVA 172
             + +LDGVT ++       G +  +      A +    AA     +   Y+S     V 
Sbjct: 56  GEEPSLDGVTHLLISTAPDSGGDPVL------AALGDQIAARAAQFRWVGYLSTT--AV- 106

Query: 173 NY-------------LLQGYYEGKR--AAETELLTRYPYGGVILRPGFIYG 208
            Y             L      G+    AE +          + R   IYG
Sbjct: 107 -YGDHDGAWVDETTPLTPTAARGRWRVMAEQQWQAVPNLPLHVFRLAGIYG 156

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* Length = 357

 Score = 47.7 bits (114), Expect = 2e-06
 Identities = 26/118 (22%), Positives = 46/118 (38%), Gaps = 9/118 (7%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLT----VASLSRSGRSSLRDSWANNVIWHQGNLLSSD 113
            ++V GG GF+GS+I +   D+G+T    V +L    +              + + L   
Sbjct: 48  MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLNIADYMDKEDFLIQI 107

Query: 114 SWKEALDGVTAVI---SCVGGFGSN-SYMYKINGTANINAIRAASEKGVKRFVYISAA 167
              E    V A+    +C      +  YM   N   +   +    E+ +  F+Y S+A
Sbjct: 108 MAGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIP-FLYASSA 164

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 Length = 310

 Score = 45.7 bits (109), Expect = 7e-06
 Identities = 26/116 (22%), Positives = 45/116 (38%), Gaps = 9/116 (7%)

Query: 60  LVLGGNGFVGSHICREALDRGLT----VASLSRSGRSSLRDSWANNVIWHQGNLLSSDSW 115
           +V GG GF+GS+I +   D+G+T    V +L    +              + + L     
Sbjct: 3   IVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLNIADYMDKEDFLIQIMA 62

Query: 116 KEALDGVTAVI---SCVGGFGSN-SYMYKINGTANINAIRAASEKGVKRFVYISAA 167
            E    V A+    +C      +  YM   N   +   +    E+ +  F+Y S+A
Sbjct: 63  GEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIP-FLYASSA 117

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi} Length = 118

 Score = 42.9 bits (101), Expect = 1e-05
 Identities = 22/107 (20%), Positives = 31/107 (28%), Gaps = 19/107 (17%)

Query: 58  KLLVLGGNGFVGSHICREALDRG---LTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDS 114
            + V+G  G +G  I           +TVA    +  + L       V   Q +      
Sbjct: 7   NICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLNRM---GVATKQVDAKDEAG 62

Query: 115 WKEALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRF 161
             +AL G  AVIS                       +AA   G   F
Sbjct: 63  LAKALGGFDAVISA------------APFFLTPIIAKAAKAAGAHYF 97

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1 Length = 660

 Score = 44.6 bits (106), Expect = 2e-05
 Identities = 22/124 (17%), Positives = 45/124 (36%), Gaps = 9/124 (7%)

Query: 50  NVPPPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWAN-NVIWHQGN 108
                   ++L+LG NGF+G+H+    L            G  ++     + +  + +G+
Sbjct: 309 ACTARRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGD 368

Query: 109 LLSSDSWKEALDGVT-AVISCVGGFGSNSYM------YKINGTANINAIRAASEKGVKRF 161
           +     W E        V+  V       Y       ++++   N+  IR   +   KR 
Sbjct: 369 ISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR-KRI 427

Query: 162 VYIS 165
           ++ S
Sbjct: 428 IFPS 431

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A Length = 345

 Score = 43.5 bits (103), Expect = 4e-05
 Identities = 30/184 (16%), Positives = 62/184 (33%), Gaps = 34/184 (18%)

Query: 58  KLLVLGGNGFVGSHICREALDRG---LTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDS 114
           ++L+LG NGF+G+H+    L      +    +     S   +    +  + +G++     
Sbjct: 2   RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNH--PHFHFVEGDISIHSE 59

Query: 115 WKEALDG-VTAVISCVGGFGSNSYMY------KINGTANINAIRAASEKGVKRFVYISAA 167
           W E        V+  V       Y        +++   N+  IR   +   KR ++ S +
Sbjct: 60  WIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR-KRIIFPSTS 118

Query: 168 D-FGVANYLLQG-----------------YYEGKRAAETELLTRYPYGGV---ILRPGFI 206
           + +G+ +                      Y   K+  +  +       G+   + RP   
Sbjct: 119 EVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNW 178

Query: 207 YGTR 210
            G R
Sbjct: 179 MGPR 182

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} Length = 312

 Score = 43.0 bits (102), Expect = 5e-05
 Identities = 24/131 (18%), Positives = 47/131 (35%), Gaps = 25/131 (19%)

Query: 56  SEKLLVLGGNGFVGSHICREALDR-GLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDS 114
           + K+L++G  G +G+ + ++     G     +  S    L     N+  +   N L  + 
Sbjct: 2   NPKILIIGACGQIGTELTQKLRKLYGTEN--VIASDIRKLNTDVVNSGPFEVVNALDFNQ 59

Query: 115 WKE--------------ALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKR 160
            +               AL   TA  +    +  N     +N   ++  +  A  K +K+
Sbjct: 60  IEHLVEVHKITDIYLMAALLSATAEKNPAFAWDLN-----MNSLFHV--LNLAKAKKIKK 112

Query: 161 FVYIS-AADFG 170
             + S  A FG
Sbjct: 113 IFWPSSIAVFG 123

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} Length = 342

 Score = 42.4 bits (100), Expect = 1e-04
 Identities = 25/131 (19%), Positives = 48/131 (36%), Gaps = 18/131 (13%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTVASLSRS------GRSSLRDSWANNVIWHQGNLLS 111
            + ++G  G VG  + +  +  G                +      ++  V     +L +
Sbjct: 16  HIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPAGFSGAVDARAADLSA 75

Query: 112 SDSWKEALD-GVTAVI---SCVGGFGSNSYM--YKIN--GTANI-NAIRAASEKG--VKR 160
               ++ ++     +    + V G     +   Y+IN  GT  + +AIR A+ K     R
Sbjct: 76  PGEAEKLVEARPDVIFHLAAIVSGEAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPR 135

Query: 161 FVYIS-AADFG 170
            V+ S  A FG
Sbjct: 136 VVFTSSIAVFG 146

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 Length = 699

 Score = 40.9 bits (96), Expect = 3e-04
 Identities = 30/135 (22%), Positives = 55/135 (40%), Gaps = 24/135 (17%)

Query: 52  PPPPSEKLLVLGGNGFVGSHICREALDRGLTVA---SLSRSGRSSLR--DSWAN-NVIWH 105
               S+ +LV GG G++GSH   E ++ G       +LS S   S+   +     ++ ++
Sbjct: 7   SESTSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFY 66

Query: 106 QGNLLSSDSWKEALDGV------TAVISC-----VGGFGSN--SYMYKINGTANINAIRA 152
           + +L      ++ L+ V       +VI       VG        Y Y  N    +  +  
Sbjct: 67  EVDLCD----RKGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRY-YHNNILGTVVLLEL 121

Query: 153 ASEKGVKRFVYISAA 167
             +  V +FV+ S+A
Sbjct: 122 MQQYNVSKFVFSSSA 136

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	286
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	100.0
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	100.0
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	100.0
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	100.0
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	100.0
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	100.0
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	100.0
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	100.0
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	100.0
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	100.0
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	100.0
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	100.0
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	100.0
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	100.0
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	100.0
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	100.0
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	100.0
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	100.0
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	100.0
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	100.0
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	100.0
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	100.0
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	100.0
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	100.0
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	100.0
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	100.0
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	100.0
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	100.0
4f6l_B	508	AUSA reductase domain protein; thioester reductase	100.0
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	100.0
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	100.0
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	100.0
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	100.0
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	100.0
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	100.0
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	100.0
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	100.0
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	100.0
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	100.0
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	100.0
4f6c_A	427	AUSA reductase domain protein; thioester reductase	100.0
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	100.0
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	100.0
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	100.0
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	100.0
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	100.0
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	100.0
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	99.98
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	99.98
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.98
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	99.98
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	99.98
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	99.98
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	99.98
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	99.98
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	99.97
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	99.97
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	99.97
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	99.97
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.97
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.97
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	99.97
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	99.97
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	99.97
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	99.97
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	99.97
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	99.97
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	99.97
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	99.97
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	99.97
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	99.97
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	99.97
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	99.97
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	99.97
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	99.97
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.97
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.97
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	99.97
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	99.96
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	99.96
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.96
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	99.96
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.96
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.96
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.96
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.96
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.95
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.95
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.95
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	99.95
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	99.94
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	99.94
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	99.94
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	99.94
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	99.93
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	99.93
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	99.93
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	99.93
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	99.93
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	99.93
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	99.93
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	99.92
1spx_A	278	Short-chain reductase family member (5L265); paral	99.92
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	99.92
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	99.92
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	99.92
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.92
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	99.92
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	99.92
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	99.92
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.92
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	99.92
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	99.92
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	99.92
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	99.92
1xq1_A	266	Putative tropinone reducatse; structural genomics,	99.92
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	99.92
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	99.92
3rih_A	293	Short chain dehydrogenase or reductase; structural	99.92
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	99.92
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	99.92
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	99.92
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	99.92
3imf_A	257	Short chain dehydrogenase; structural genomics, in	99.91
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	99.91
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	99.91
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	99.91
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	99.91
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	99.91
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	99.91
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	99.91
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	99.91
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	99.91
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	99.91
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	99.91
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	99.91
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	99.91
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	99.91
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	99.91
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	99.91
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	99.91
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.91
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	99.91
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	99.91
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	99.91
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	99.91
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	99.91
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	99.91
4dqx_A	277	Probable oxidoreductase protein; structural genomi	99.91
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	99.91
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	99.91
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	99.91
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	99.91
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	99.9
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	99.9
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	99.9
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	99.9
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	99.9
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	99.9
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	99.9
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	99.9
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	99.9
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	99.9
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	99.9
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	99.9
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	99.9
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	99.9
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	99.9
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	99.9
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	99.9
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	99.9
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	99.9
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	99.9
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	99.9
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	99.9
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	99.9
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	99.9
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	99.9
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	99.9
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	99.9
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	99.9
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	99.9
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	99.9
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	99.9
1xkq_A	280	Short-chain reductase family member (5D234); parra	99.9
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	99.9
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	99.9
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	99.9
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	99.9
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	99.9
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	99.9
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	99.9
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	99.9
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	99.9
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.9
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	99.9
4e4y_A	244	Short chain dehydrogenase family protein; structur	99.9
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	99.9
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	99.9
3cxt_A	291	Dehydrogenase with different specificities; rossma	99.9
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	99.9
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	99.9
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	99.9
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	99.9
1xhl_A	297	Short-chain dehydrogenase/reductase family member	99.9
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	99.9
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	99.89
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	99.89
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	99.89
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	99.89
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	99.89
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	99.89
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	99.89
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	99.89
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.89
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	99.89
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	99.89
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	99.89
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	99.89
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	99.89
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	99.89
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	99.89
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	99.89
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.89
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	99.89
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	99.89
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	99.89
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	99.89
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	99.89
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.89
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	99.89
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	99.89
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	99.88
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	99.88
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	99.88
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	99.88
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.88
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	99.88
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	99.88
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	99.88
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	99.88
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	99.88
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	99.88
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	99.88
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	99.88
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	99.88
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	99.88
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	99.88
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	99.88
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	99.88
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	99.88
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.88
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	99.88
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.88
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	99.88
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	99.88
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	99.88
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	99.87
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	99.87
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	99.87
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	99.87
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	99.87
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	99.87
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	99.87
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	99.87
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	99.87
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	99.87
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	99.87
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	99.87
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	99.86
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.86
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	99.86
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	99.86
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	99.86
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	99.86
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	99.86
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	99.86
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	99.85
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	99.85
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	99.85
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	99.84
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	99.84
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	99.84
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	99.84
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	99.83
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	99.83
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	99.83
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	99.83
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	99.83
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.83
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	99.83
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	99.81
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.81
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	99.8
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	99.8
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	99.79
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.76
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	99.76
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	99.74
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	99.73
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	99.7
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	99.68
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	99.67
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	99.66
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.58
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	99.57
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	99.54
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	99.54
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	99.53
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	99.52
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.51
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	99.51
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.51
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	99.43
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.23
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	99.12
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	99.11
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	99.06
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	99.02
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	98.89
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	98.89
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	98.87
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	98.86
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	98.85
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	98.84
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	98.75
1id1_A	153	Putative potassium channel protein; RCK domain, E.	98.74
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	98.73
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	98.71
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	98.68
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	98.66
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	98.59
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	98.51
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	98.48
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	98.47
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	98.46
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	98.44
3c85_A	183	Putative glutathione-regulated potassium-efflux S	98.42
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	98.34
1dih_A	273	Dihydrodipicolinate reductase; oxidoreductase; HET	98.3
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	98.18
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	98.02
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	97.96
2hjs_A	340	USG-1 protein homolog; aspartate-semialdehyde dehy	97.96
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	97.93
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	97.92
2nqt_A	352	N-acetyl-gamma-glutamyl-phosphate reductase; apopr	97.9
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	97.9
1lnq_A	336	MTHK channels, potassium channel related protein;	97.85
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	97.79
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	97.78
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	97.76
4f3y_A	272	DHPR, dihydrodipicolinate reductase; structural ge	97.71
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	97.69
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	97.69
3pwk_A	366	Aspartate-semialdehyde dehydrogenase; NADP binding	97.68
2ozp_A	345	N-acetyl-gamma-glutamyl-phosphate reductase; amino	97.67
4g65_A	461	TRK system potassium uptake protein TRKA; structur	97.67
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	97.67
2vns_A	215	Metalloreductase steap3; metal-binding, transmembr	97.63
1ys4_A	354	Aspartate-semialdehyde dehydrogenase; oxidoreducta	97.62
1p9o_A	313	Phosphopantothenoylcysteine synthetase; ligase; 2.	97.61
2r00_A	336	Aspartate-semialdehyde dehydrogenase; conformation	97.59
1xyg_A	359	Putative N-acetyl-gamma-glutamyl-phosphate reduct;	97.56
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	97.55
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	97.54
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	97.54
1y81_A	138	Conserved hypothetical protein; hyperthermophIle,	97.53
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	97.52
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	97.52
1t4b_A	367	Aspartate-semialdehyde dehydrogenase; asadh, HOSR,	97.51
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	97.51
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	97.47
3hhp_A	312	Malate dehydrogenase; MDH, citric acid cycle, TCA	97.45
1y6j_A	318	L-lactate dehydrogenase; southeast collaboratory f	97.43
3dr3_A	337	N-acetyl-gamma-glutamyl-phosphate reductase; csgid	97.43
3ijp_A	288	DHPR, dihydrodipicolinate reductase; ssgcid, SBRI,	97.42
2ep5_A	350	350AA long hypothetical aspartate-semialdehyde deh	97.42
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	97.4
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	97.39
2pv7_A	298	T-protein [includes: chorismate mutase (EC 5.4.99	97.38
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	97.36
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	97.36
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	97.36
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	97.34
3uw3_A	377	Aspartate-semialdehyde dehydrogenase; structural g	97.34
3pzr_A	370	Aspartate-semialdehyde dehydrogenase; NADP, oxidor	97.31
3nep_X	314	Malate dehydrogenase; halophIle, molecular adpatat	97.3
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	97.3
4eye_A	342	Probable oxidoreductase; structural genomics, niai	97.29
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	97.28
3tl2_A	315	Malate dehydrogenase; center for structural genomi	97.28
2x0j_A	294	Malate dehydrogenase; oxidoreductase, hyperthermop	97.27
2d59_A	144	Hypothetical protein PH1109; COA binding, structur	97.26
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	97.26
4h7p_A	345	Malate dehydrogenase; ssgcid, structural G seattle	97.26
3gg2_A	450	Sugar dehydrogenase, UDP-glucose/GDP-mannose dehyd	97.25
3orq_A	377	N5-carboxyaminoimidazole ribonucleotide synthetas;	97.24
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	97.23
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	97.22
3d0o_A	317	L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly	97.22
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	97.19
4g65_A	461	TRK system potassium uptake protein TRKA; structur	97.19
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	97.18
3tz6_A	344	Aspartate-semialdehyde dehydrogenase; asadh, ASD,	97.18
2ph5_A	480	Homospermidine synthase; alpha-beta protein, struc	97.17
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	97.16
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	97.16
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	97.16
1ldn_A	316	L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA	97.15
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	97.15
1ez4_A	318	Lactate dehydrogenase; rossmann fold, oxidoreducta	97.15
4gx0_A	565	TRKA domain protein; membrane protein, ION channel	97.14
3gms_A	340	Putative NADPH:quinone reductase; structural genom	97.12
2v6b_A	304	L-LDH, L-lactate dehydrogenase; oxidoreductase, ra	97.12
2duw_A	145	Putative COA-binding protein; ligand binding prote	97.12
1mv8_A	436	GMD, GDP-mannose 6-dehydrogenase; rossman fold, do	97.12
2zqz_A	326	L-LDH, L-lactate dehydrogenase; oxidoreductase, ro	97.11
1t2d_A	322	LDH-P, L-lactate dehydrogenase; ternary complex, o	97.1
2ew2_A	316	2-dehydropantoate 2-reductase, putative; alpha-str	97.1
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	97.07
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	97.07
4e4t_A	419	Phosphoribosylaminoimidazole carboxylase, ATPase;	97.07
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	97.05
1iuk_A	140	Hypothetical protein TT1466; structural genomics,	97.05
3ldh_A	330	Lactate dehydrogenase; oxidoreductase, CHOH donor,	97.03
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	97.02
2yv3_A	331	Aspartate-semialdehyde dehydrogenase; aspartate pa	97.02
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	97.02
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	97.01
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	97.0
3ax6_A	380	Phosphoribosylaminoimidazole carboxylase, ATPase;	97.0
4dpl_A	359	Malonyl-COA/succinyl-COA reductase; dinucleotide b	96.99
4dpk_A	359	Malonyl-COA/succinyl-COA reductase; dinucleotide b	96.99
2hjr_A	328	Malate dehydrogenase; malaria, structural genomics	96.99
4gbj_A	297	6-phosphogluconate dehydrogenase NAD-binding; stru	96.97
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	96.97
3k5i_A	403	Phosphoribosyl-aminoimidazole carboxylase; purine	96.92
1hyh_A	309	L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2	96.92
1a5z_A	319	L-lactate dehydrogenase; oxidoreductase, glycolysi	96.9
3q2o_A	389	Phosphoribosylaminoimidazole carboxylase, ATPase;	96.9
1lld_A	319	L-lactate dehydrogenase; oxidoreductase(CHOH (D)-N	96.88
3hsk_A	381	Aspartate-semialdehyde dehydrogenase; candida albi	96.88
2ewd_A	317	Lactate dehydrogenase,; protein-substrate_cofactor	96.87
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	96.86
1guz_A	310	Malate dehydrogenase; oxidoreductase, tricarboxyli	96.85
3qy9_A	243	DHPR, dihydrodipicolinate reductase; rossmann fold	96.84
1vpd_A	299	Tartronate semialdehyde reductase; structural geno	96.83
2h78_A	302	Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601	96.81
2xxj_A	310	L-LDH, L-lactate dehydrogenase; oxidoreductase, hy	96.8
4ffl_A	363	PYLC; amino acid, biosynthesis of pyrrolysine, iso	96.8
3obb_A	300	Probable 3-hydroxyisobutyrate dehydrogenase; struc	96.8
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	96.78
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	96.76
7mdh_A	375	Protein (malate dehydrogenase); chloroplastic mala	96.75
2raf_A	209	Putative dinucleotide-binding oxidoreductase; NP_7	96.75
1bg6_A	359	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L	96.74
3gxh_A	157	Putative phosphatase (DUF442); YP_001181608.1, str	96.74
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	96.72
4huj_A	220	Uncharacterized protein; PSI-biology, nysgrc, stru	96.71
3vtf_A	444	UDP-glucose 6-dehydrogenase; two discrete alpha/be	96.71
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	96.71
3pp8_A	315	Glyoxylate/hydroxypyruvate reductase A; structural	96.71
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	96.69
4ezb_A	317	Uncharacterized conserved protein; structural geno	96.69
1oi7_A	288	Succinyl-COA synthetase alpha chain; SCS, ligase,	96.69
3dtt_A	245	NADP oxidoreductase; structural genomics, joint ce	96.68
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	96.66
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	96.65
3g79_A	478	NDP-N-acetyl-D-galactosaminuronic acid dehydrogen;	96.65
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	96.65
3pdu_A	287	3-hydroxyisobutyrate dehydrogenase family protein;	96.64
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	96.64
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	96.64
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	96.63
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	96.62
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	96.62
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	96.61
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	96.61
3ggo_A	314	Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b	96.61
3qha_A	296	Putative oxidoreductase; seattle structural genomi	96.61
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	96.6
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	96.6
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	96.6
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	96.6
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	96.58
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	96.58
2hk9_A	275	Shikimate dehydrogenase; shikimate pathway, drug d	96.58
1edz_A	320	5,10-methylenetetrahydrofolate dehydrogenase; nucl	96.57
3gt0_A	247	Pyrroline-5-carboxylate reductase; structural geno	96.56
1vkn_A	351	N-acetyl-gamma-glutamyl-phosphate reductase; TM178	96.54
2nu8_A	288	Succinyl-COA ligase [ADP-forming] subunit alpha; c	96.54
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	96.53
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	96.52
3g0o_A	303	3-hydroxyisobutyrate dehydrogenase; NAD(P), valine	96.52
3qsg_A	312	NAD-binding phosphogluconate dehydrogenase-like P;	96.51
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	96.51
4a26_A	300	Putative C-1-tetrahydrofolate synthase, cytoplasm;	96.5
1yb4_A	295	Tartronic semialdehyde reductase; structural genom	96.49
3pid_A	432	UDP-glucose 6-dehydrogenase; rossmann fold, oxidor	96.49

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=100.00  E-value=1.2e-36  Score=250.03  Aligned_cols=211  Identities=19%  Similarity=0.165  Sum_probs=168.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccccCCCc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFGSN  135 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~~~~~  135 (286)
                      ||+||||||||+||++++++|+++|++|++++|++++...  ...+++++.+|++|++++.++++++|+|||+|+.....
T Consensus         4 m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~~~~~   81 (227)
T 3dhn_A            4 VKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKI--ENEHLKVKKADVSSLDEVCEVCKGADAVISAFNPGWNN   81 (227)
T ss_dssp             CCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCC--CCTTEEEECCCTTCHHHHHHHHTTCSEEEECCCC----
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchh--ccCceEEEEecCCCHHHHHHHhcCCCEEEEeCcCCCCC
Confidence            5799999999999999999999999999999999765321  23689999999999999999999999999999987666


Q ss_pred             chhhhhhhHHHHHHHHHHHHcCCCEEEEEecCC-cCC---------CCccccchHHHHHHHHHHHHH---hCCCcEEEEe
Q 023205          136 SYMYKINGTANINAIRAASEKGVKRFVYISAAD-FGV---------ANYLLQGYYEGKRAAETELLT---RYPYGGVILR  202 (286)
Q Consensus       136 ~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~~-~~~---------~~~~~~~y~~sK~~~E~~~~~---~~g~~~~ilR  202 (286)
                      ...+++|+.++.++++++++.++++|||+||.. +..         +..+.+.|+.+|..+|.++..   ..|++++++|
T Consensus        82 ~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilr  161 (227)
T 3dhn_A           82 PDIYDETIKVYLTIIDGVKKAGVNRFLMVGGAGSLFIAPGLRLMDSGEVPENILPGVKALGEFYLNFLMKEKEIDWVFFS  161 (227)
T ss_dssp             --CCSHHHHHHHHHHHHHHHTTCSEEEEECCSTTSEEETTEEGGGTTCSCGGGHHHHHHHHHHHHHTGGGCCSSEEEEEE
T ss_pred             hhHHHHHHHHHHHHHHHHHHhCCCEEEEeCChhhccCCCCCccccCCcchHHHHHHHHHHHHHHHHHHhhccCccEEEEe
Confidence            668899999999999999999999999999953 221         123568899999999965543   5799999999


Q ss_pred             eCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcCCCCCCCeeEeccccccc
Q 023205          203 PGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDPVFPPGIVDVHGILRYS  282 (286)
Q Consensus       203 p~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~l~~~~~~s  282 (286)
                      |+.+||+........                 .....+.......++++++|+|++++.+++++...+++|++++|++.+
T Consensus       162 p~~v~g~~~~~~~~~-----------------~~~~~~~~~~~~~~~i~~~Dva~ai~~~l~~~~~~g~~~~~~~~~~~~  224 (227)
T 3dhn_A          162 PAADMRPGVRTGRYR-----------------LGKDDMIVDIVGNSHISVEDYAAAMIDELEHPKHHQERFTIGYLEHHH  224 (227)
T ss_dssp             CCSEEESCCCCCCCE-----------------EESSBCCCCTTSCCEEEHHHHHHHHHHHHHSCCCCSEEEEEECCSCCC
T ss_pred             CCcccCCCcccccee-----------------ecCCCcccCCCCCcEEeHHHHHHHHHHHHhCccccCcEEEEEeehhcc
Confidence            999999976432100                 111222222223789999999999999999999889999999999999


Q ss_pred             ccC
Q 023205          283 QKS  285 (286)
Q Consensus       283 ~~~  285 (286)
                      |+.
T Consensus       225 ~~~  227 (227)
T 3dhn_A          225 HHH  227 (227)
T ss_dssp             ---
T ss_pred             cCC
Confidence            974

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=100.00  E-value=1.5e-35  Score=254.72  Aligned_cols=215  Identities=20%  Similarity=0.140  Sum_probs=176.3

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccccCC-
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFG-  133 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~~~-  133 (286)
                      |+|+|||||||||||++++++|+++|++|++++|++.. ..   ..+++++.+|+. ++.+.++++++|+|||+|+... 
T Consensus         1 M~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~---~~~~~~~~~Dl~-~~~~~~~~~~~d~Vih~a~~~~~   75 (311)
T 3m2p_A            1 MSLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGN-KA---INDYEYRVSDYT-LEDLINQLNDVDAVVHLAATRGS   75 (311)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC---------CCEEEECCCC-HHHHHHHTTTCSEEEECCCCCCS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCc-cc---CCceEEEEcccc-HHHHHHhhcCCCEEEEccccCCC
Confidence            46899999999999999999999999999999999332 21   238999999999 9999999999999999999765 


Q ss_pred             -CcchhhhhhhHHHHHHHHHHHHcCCCEEEEEecC-CcCCCC----------ccccchHHHHHHHHHHHHH---hCCCcE
Q 023205          134 -SNSYMYKINGTANINAIRAASEKGVKRFVYISAA-DFGVAN----------YLLQGYYEGKRAAETELLT---RYPYGG  198 (286)
Q Consensus       134 -~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~-~~~~~~----------~~~~~y~~sK~~~E~~~~~---~~g~~~  198 (286)
                       ++...+++|+.++.+++++|++.++++|||+||. +|+...          .|.+.|+.+|..+|+++++   ..|+++
T Consensus        76 ~~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~  155 (311)
T 3m2p_A           76 QGKISEFHDNEILTQNLYDACYENNISNIVYASTISAYSDETSLPWNEKELPLPDLMYGVSKLACEHIGNIYSRKKGLCI  155 (311)
T ss_dssp             SSCGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCCGGGCSBCTTSCCCCSSHHHHHHHHHHHHHHHHHHHSCCEE
T ss_pred             CChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCE
Confidence             4567789999999999999999999999999994 454332          2457899999999998875   479999


Q ss_pred             EEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCC--CCccCCCccHHHHHHHHHHHhcCCCCCCCeeEec
Q 023205          199 VILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLV--GPLFTPPVNVTVVAKVAVRAATDPVFPPGIVDVH  276 (286)
Q Consensus       199 ~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~l~  276 (286)
                      +++||+.+||+.....         .++..+.........++..  ++..++|++++|+|++++.+++++. .+++||++
T Consensus       156 ~ilRp~~v~G~~~~~~---------~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~v~Dva~a~~~~~~~~~-~~~~~~i~  225 (311)
T 3m2p_A          156 KNLRFAHLYGFNEKNN---------YMINRFFRQAFHGEQLTLHANSVAKREFLYAKDAAKSVIYALKQEK-VSGTFNIG  225 (311)
T ss_dssp             EEEEECEEECSCC--C---------CHHHHHHHHHHTCCCEEESSBCCCCEEEEEHHHHHHHHHHHTTCTT-CCEEEEEC
T ss_pred             EEEeeCceeCcCCCCC---------CHHHHHHHHHHcCCCeEEecCCCeEEceEEHHHHHHHHHHHHhcCC-CCCeEEeC
Confidence            9999999999986432         2344455554444555443  5567899999999999999999876 58999999


Q ss_pred             cccccccc
Q 023205          277 GILRYSQK  284 (286)
Q Consensus       277 ~~~~~s~~  284 (286)
                      +++.++++
T Consensus       226 ~~~~~s~~  233 (311)
T 3m2p_A          226 SGDALTNY  233 (311)
T ss_dssp             CSCEECHH
T ss_pred             CCCcccHH
Confidence            99998875

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=100.00  E-value=5.6e-36  Score=261.56  Aligned_cols=225  Identities=16%  Similarity=0.143  Sum_probs=180.3

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccc---c-------CCceeEEeccCCCHhHHHHHhcCCCE
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDS---W-------ANNVIWHQGNLLSSDSWKEALDGVTA  124 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~---~-------~~~~~~i~~Dl~d~~~~~~~~~~~d~  124 (286)
                      ++|+|||||||||||++++++|+++|++|++++|+........   .       ..+++++.+|+.|++.+.++++++|+
T Consensus        24 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~  103 (351)
T 3ruf_A           24 SPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMKGVDH  103 (351)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTTTCSE
T ss_pred             CCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhcCCCE
Confidence            3679999999999999999999999999999999875432110   0       06899999999999999999999999


Q ss_pred             EEEccccCC------CcchhhhhhhHHHHHHHHHHHHcCCCEEEEEecC-CcCCCC----------ccccchHHHHHHHH
Q 023205          125 VISCVGGFG------SNSYMYKINGTANINAIRAASEKGVKRFVYISAA-DFGVAN----------YLLQGYYEGKRAAE  187 (286)
Q Consensus       125 vi~~a~~~~------~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~-~~~~~~----------~~~~~y~~sK~~~E  187 (286)
                      |||+|+...      ++...+++|+.++.+++++|++.++++|||+||. +|+...          .+.+.|+.+|..+|
T Consensus       104 Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E  183 (351)
T 3ruf_A          104 VLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTYAASSSTYGDHPALPKVEENIGNPLSPYAVTKYVNE  183 (351)
T ss_dssp             EEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHHHHHHHHH
T ss_pred             EEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEecHHhcCCCCCCCCccCCCCCCCChhHHHHHHHH
Confidence            999999753      3345678999999999999999999999999994 455432          34678999999999


Q ss_pred             HHHHH---hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCC--CCccCCCccHHHHHHHHHHH
Q 023205          188 TELLT---RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLV--GPLFTPPVNVTVVAKVAVRA  262 (286)
Q Consensus       188 ~~~~~---~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~i~v~Dva~~~~~~  262 (286)
                      ++++.   ..|++++++||+.+||+.......     ...++..+.........++..  |+..++|++++|+|++++.+
T Consensus       184 ~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~  258 (351)
T 3ruf_A          184 IYAQVYARTYGFKTIGLRYFNVFGRRQDPNGA-----YAAVIPKWTAAMLKGDDVYINGDGETSRDFCYIDNVIQMNILS  258 (351)
T ss_dssp             HHHHHHHHHHCCCCEEEEECSEESTTCCCCST-----TCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCEEEEeeCceeCcCCCCCcc-----hhhHHHHHHHHHHcCCCcEEeCCCCeEEeeEEHHHHHHHHHHH
Confidence            98875   469999999999999998653311     123444454444444555543  45688999999999999999


Q ss_pred             hcC-CCCCCCeeEeccccccccc
Q 023205          263 ATD-PVFPPGIVDVHGILRYSQK  284 (286)
Q Consensus       263 l~~-~~~~~~~~~l~~~~~~s~~  284 (286)
                      +.. +...+++||+++++.++++
T Consensus       259 ~~~~~~~~~~~~ni~~~~~~s~~  281 (351)
T 3ruf_A          259 ALAKDSAKDNIYNVAVGDRTTLN  281 (351)
T ss_dssp             HTCCGGGCSEEEEESCSCCEEHH
T ss_pred             HhhccccCCCEEEeCCCCcccHH
Confidence            987 4456899999999998875

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=100.00  E-value=1.2e-35  Score=261.58  Aligned_cols=229  Identities=16%  Similarity=0.166  Sum_probs=180.6

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHC-CCeEEEEecCCCcccccccCCceeEEeccCC-CHhHHHHHhcCCCEEEEcccc
Q 023205           54 PPSEKLLVLGGNGFVGSHICREALDR-GLTVASLSRSGRSSLRDSWANNVIWHQGNLL-SSDSWKEALDGVTAVISCVGG  131 (286)
Q Consensus        54 ~~~~~VlVtGatG~iG~~l~~~Ll~~-g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~-d~~~~~~~~~~~d~vi~~a~~  131 (286)
                      .++|+|||||||||||++|+++|+++ |++|++++|+.++........+++++.+|++ |.+.+.++++++|+|||+|+.
T Consensus        22 m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~~d~~~~~~~~~~~d~Vih~A~~  101 (372)
T 3slg_A           22 MKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVKHERMHFFEGDITINKEWVEYHVKKCDVILPLVAI  101 (372)
T ss_dssp             -CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGGSTTEEEEECCTTTCHHHHHHHHHHCSEEEECBCC
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhccCCCeEEEeCccCCCHHHHHHHhccCCEEEEcCcc
Confidence            45689999999999999999999998 8999999998766433333468999999999 999999999999999999997


Q ss_pred             CC------CcchhhhhhhHHHHHHHHHHHHcCCCEEEEEecC-CcCCCC-----------------ccccchHHHHHHHH
Q 023205          132 FG------SNSYMYKINGTANINAIRAASEKGVKRFVYISAA-DFGVAN-----------------YLLQGYYEGKRAAE  187 (286)
Q Consensus       132 ~~------~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~-~~~~~~-----------------~~~~~y~~sK~~~E  187 (286)
                      ..      ++...+++|+.++.+++++|++.+ ++|||+||. +|+...                 .+.+.|+.+|..+|
T Consensus       102 ~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~p~~~p~~~Y~~sK~~~E  180 (372)
T 3slg_A          102 ATPATYVKQPLRVFELDFEANLPIVRSAVKYG-KHLVFPSTSEVYGMCADEQFDPDASALTYGPINKPRWIYACSKQLMD  180 (372)
T ss_dssp             CCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHT-CEEEEECCGGGGBSCCCSSBCTTTCCEEECCTTCTTHHHHHHHHHHH
T ss_pred             ccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhC-CcEEEeCcHHHhCCCCCCCCCccccccccCCCCCCCCcHHHHHHHHH
Confidence            64      334667899999999999999999 999999994 455421                 23447999999999


Q ss_pred             HHHHHh--CCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCC--CCccCCCccHHHHHHHHHHHh
Q 023205          188 TELLTR--YPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLV--GPLFTPPVNVTVVAKVAVRAA  263 (286)
Q Consensus       188 ~~~~~~--~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~i~v~Dva~~~~~~l  263 (286)
                      +++++.  .|++++++||+.+|||...+.+. +......++..+.........+++.  |+..++|++++|+|++++.++
T Consensus       181 ~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~  259 (372)
T 3slg_A          181 RVIWGYGMEGLNFTLFRPFNWIGPGLDSIYT-PKEGSSRVVTQFLGHIVRGENISLVDGGSQKRAFTYVDDGISALMKII  259 (372)
T ss_dssp             HHHHHHHTTTCEEEEEEECSEECSSCCCTTC-SBSCSCHHHHHHHHHHHHTCCEEEGGGGCCEEECEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHCCCCEEEEccccccCCCcccccc-cccccchHHHHHHHHHHcCCCcEEeCCCceEEEEEEHHHHHHHHHHHH
Confidence            988762  28999999999999998654221 1111123444455444444555544  456789999999999999999


Q ss_pred             cCCC--CCCCeeEeccc-cccccc
Q 023205          264 TDPV--FPPGIVDVHGI-LRYSQK  284 (286)
Q Consensus       264 ~~~~--~~~~~~~l~~~-~~~s~~  284 (286)
                      +++.  ..+++||+++| +.+|++
T Consensus       260 ~~~~~~~~~~~~ni~~~~~~~s~~  283 (372)
T 3slg_A          260 ENSNGVATGKIYNIGNPNNNFSVR  283 (372)
T ss_dssp             HCGGGTTTTEEEEECCTTCEEEHH
T ss_pred             hcccCcCCCceEEeCCCCCCccHH
Confidence            9875  56899999996 788875

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=100.00  E-value=9.6e-35  Score=253.26  Aligned_cols=220  Identities=15%  Similarity=0.177  Sum_probs=176.2

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCC--CeEEEEecCCCccccc-----ccCCceeEEeccCCCHhHHHHHhcC--CCEE
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRG--LTVASLSRSGRSSLRD-----SWANNVIWHQGNLLSSDSWKEALDG--VTAV  125 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g--~~V~~l~R~~~~~~~~-----~~~~~~~~i~~Dl~d~~~~~~~~~~--~d~v  125 (286)
                      .+|+|||||||||||++|+++|+++|  ++|++++|........     ...++++++.+|++|++.+.+++++  +|+|
T Consensus        23 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~V  102 (346)
T 4egb_A           23 NAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEIQNGELLEHVIKERDVQVI  102 (346)
T ss_dssp             -CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHTCCEE
T ss_pred             CCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhhhhhccCCCeEEEEcCCCCHHHHHHHHhhcCCCEE
Confidence            46799999999999999999999999  7888888875332111     1135899999999999999999987  9999


Q ss_pred             EEccccCC------CcchhhhhhhHHHHHHHHHHHHcCCCEEEEEecC-CcCCCC-----------ccccchHHHHHHHH
Q 023205          126 ISCVGGFG------SNSYMYKINGTANINAIRAASEKGVKRFVYISAA-DFGVAN-----------YLLQGYYEGKRAAE  187 (286)
Q Consensus       126 i~~a~~~~------~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~-~~~~~~-----------~~~~~y~~sK~~~E  187 (286)
                      ||+|+...      ++...+++|+.++.+++++|++.++++|||+||. +|+...           .|.+.|+.+|..+|
T Consensus       103 ih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vy~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E  182 (346)
T 4egb_A          103 VNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPHIKLVQVSTDEVYGSLGKTGRFTEETPLAPNSPYSSSKASAD  182 (346)
T ss_dssp             EECCCCC---------CHHHHHHTHHHHHHHHHHHHSTTSEEEEEEEGGGGCCCCSSCCBCTTSCCCCCSHHHHHHHHHH
T ss_pred             EECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCchHHhCCCCcCCCcCCCCCCCCCChhHHHHHHHH
Confidence            99999753      3456789999999999999999999999999994 455431           24578999999999


Q ss_pred             HHHHH---hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCC--CCccCCCccHHHHHHHHHHH
Q 023205          188 TELLT---RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLV--GPLFTPPVNVTVVAKVAVRA  262 (286)
Q Consensus       188 ~~~~~---~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~i~v~Dva~~~~~~  262 (286)
                      +++++   ..|++++++||+.+|||.....         .++..+........+++..  |+..+++|+++|+|++++.+
T Consensus       183 ~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~  253 (346)
T 4egb_A          183 MIALAYYKTYQLPVIVTRCSNNYGPYQYPE---------KLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDHCSAIDVV  253 (346)
T ss_dssp             HHHHHHHHHHCCCEEEEEECEEESTTCCTT---------SHHHHHHHHHHTTCCCEEETTSCCEECEEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCEEEEeecceeCcCCCcc---------chHHHHHHHHHcCCCceeeCCCCeEEeeEEHHHHHHHHHHH
Confidence            98875   4699999999999999976432         2344455555555555544  44578999999999999999


Q ss_pred             hcCCCCCCCeeEeccccccccc
Q 023205          263 ATDPVFPPGIVDVHGILRYSQK  284 (286)
Q Consensus       263 l~~~~~~~~~~~l~~~~~~s~~  284 (286)
                      ++.+. .+++||+++++.++++
T Consensus       254 ~~~~~-~g~~~~i~~~~~~s~~  274 (346)
T 4egb_A          254 LHKGR-VGEVYNIGGNNEKTNV  274 (346)
T ss_dssp             HHHCC-TTCEEEECCSCCEEHH
T ss_pred             HhcCC-CCCEEEECCCCceeHH
Confidence            98877 5899999999988875

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=100.00  E-value=8.5e-35  Score=253.70  Aligned_cols=224  Identities=19%  Similarity=0.131  Sum_probs=176.1

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccccCC
Q 023205           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFG  133 (286)
Q Consensus        54 ~~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~~~  133 (286)
                      ..+|+|||||||||||++++++|+++|++|++++|+...       .+++++.+|+.|.+.+.++++++|+|||+|+...
T Consensus        17 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-------~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A~~~~   89 (347)
T 4id9_A           17 RGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG-------TGGEEVVGSLEDGQALSDAIMGVSAVLHLGAFMS   89 (347)
T ss_dssp             ----CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS-------SCCSEEESCTTCHHHHHHHHTTCSEEEECCCCCC
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC-------CCccEEecCcCCHHHHHHHHhCCCEEEECCcccC
Confidence            346789999999999999999999999999999998754       5789999999999999999999999999999764


Q ss_pred             Cc----chhhhhhhHHHHHHHHHHHHcCCCEEEEEecC-CcCC------------CCccccchHHHHHHHHHHHHH---h
Q 023205          134 SN----SYMYKINGTANINAIRAASEKGVKRFVYISAA-DFGV------------ANYLLQGYYEGKRAAETELLT---R  193 (286)
Q Consensus       134 ~~----~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~-~~~~------------~~~~~~~y~~sK~~~E~~~~~---~  193 (286)
                      ..    ...+++|+.++.+++++|++.++++|||+||. +|+.            +..+.+.|+.+|..+|++++.   .
T Consensus        90 ~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~  169 (347)
T 4id9_A           90 WAPADRDRMFAVNVEGTRRLLDAASAAGVRRFVFASSGEVYPENRPEFLPVTEDHPLCPNSPYGLTKLLGEELVRFHQRS  169 (347)
T ss_dssp             SSGGGHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGTTTTSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHH
T ss_pred             cchhhHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHHhCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHHHHHh
Confidence            32    46778999999999999999999999999994 5554            123567899999999998874   5


Q ss_pred             CCCcEEEEeeCeee-------------cCCCCCccc--cCccccCchHHHHHHhcccCCCCCCC--CCccCCC----ccH
Q 023205          194 YPYGGVILRPGFIY-------------GTRTVGGMK--LPLGVIGSPMEMVLQHAKPLSQLPLV--GPLFTPP----VNV  252 (286)
Q Consensus       194 ~g~~~~ilRp~~v~-------------g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~----i~v  252 (286)
                      .+++++++||+.+|             ||.......  .+..+...++..+........+++..  ++..++|    +++
T Consensus       170 ~~~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~v  249 (347)
T 4id9_A          170 GAMETVILRFSHTQDATELLDEDSFFSGPRFFLRPRIHQQQNFGNAAIAELLQSRDIGEPSHILARNENGRPFRMHITDT  249 (347)
T ss_dssp             SSSEEEEEEECEEECGGGTTCTTSSSHHHHHBHHHHHHHHHHHTCHHHHHHHHHHCCSSCCEEEEECTTCCBCEECEEEH
T ss_pred             cCCceEEEccceEeecccccccccccCCCCcccccccccccccchhHHHHHHHHHHcCCCeEEeCCCCcccCCccCcEeH
Confidence            79999999999999             665321100  00000023444455555555554443  4457788    999


Q ss_pred             HHHHHHHHHHhcCCCCCCCeeEeccccccccc
Q 023205          253 TVVAKVAVRAATDPVFPPGIVDVHGILRYSQK  284 (286)
Q Consensus       253 ~Dva~~~~~~l~~~~~~~~~~~l~~~~~~s~~  284 (286)
                      +|+|++++.+++++...+++||+++++.++++
T Consensus       250 ~Dva~ai~~~~~~~~~~~~~~ni~~~~~~s~~  281 (347)
T 4id9_A          250 RDMVAGILLALDHPEAAGGTFNLGADEPADFA  281 (347)
T ss_dssp             HHHHHHHHHHHHCGGGTTEEEEESCSSCEEHH
T ss_pred             HHHHHHHHHHhcCcccCCCeEEECCCCcccHH
Confidence            99999999999988656899999999998875

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=100.00  E-value=4.5e-34  Score=233.51  Aligned_cols=193  Identities=19%  Similarity=0.224  Sum_probs=163.7

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCC-HhHHHHHhcCCCEEEEccccCCCc
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLS-SDSWKEALDGVTAVISCVGGFGSN  135 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d-~~~~~~~~~~~d~vi~~a~~~~~~  135 (286)
                      |+|+||||||+||++++++|+++|++|++++|+.++...   ..+++++++|++| ++++.++++++|+||||||...  
T Consensus         1 M~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~---~~~~~~~~~D~~d~~~~~~~~~~~~d~vi~~ag~~~--   75 (219)
T 3dqp_A            1 MKIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQ---YNNVKAVHFDVDWTPEEMAKQLHGMDAIINVSGSGG--   75 (219)
T ss_dssp             CEEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCC---CTTEEEEECCTTSCHHHHHTTTTTCSEEEECCCCTT--
T ss_pred             CeEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhh---cCCceEEEecccCCHHHHHHHHcCCCEEEECCcCCC--
Confidence            489999999999999999999999999999999765322   1689999999999 9999999999999999999865  


Q ss_pred             chhhhhhhHHHHHHHHHHHHcCCCEEEEEecCCcCCCCc-------cccchHHHHHHHHHHHHHhCCCcEEEEeeCeeec
Q 023205          136 SYMYKINGTANINAIRAASEKGVKRFVYISAADFGVANY-------LLQGYYEGKRAAETELLTRYPYGGVILRPGFIYG  208 (286)
Q Consensus       136 ~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~~~~~~~~-------~~~~y~~sK~~~E~~~~~~~g~~~~ilRp~~v~g  208 (286)
                      ...+++|+.++.+++++|++.++++||++||........       +...|+.+|..+|+++++..|++++++||+.+||
T Consensus        76 ~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~~~~e~~~~~~~~Y~~sK~~~e~~~~~~~~i~~~ilrp~~v~g  155 (219)
T 3dqp_A           76 KSLLKVDLYGAVKLMQAAEKAEVKRFILLSTIFSLQPEKWIGAGFDALKDYYIAKHFADLYLTKETNLDYTIIQPGALTE  155 (219)
T ss_dssp             SSCCCCCCHHHHHHHHHHHHTTCCEEEEECCTTTTCGGGCCSHHHHHTHHHHHHHHHHHHHHHHSCCCEEEEEEECSEEC
T ss_pred             CCcEeEeHHHHHHHHHHHHHhCCCEEEEECcccccCCCcccccccccccHHHHHHHHHHHHHHhccCCcEEEEeCceEec
Confidence            347789999999999999999999999999953222211       2678999999999988777899999999999999


Q ss_pred             CCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcCCCCCCCeeEecccc
Q 023205          209 TRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDPVFPPGIVDVHGIL  279 (286)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~l~~~~  279 (286)
                      +...+.+.                         .++...++++++|+|++++.+++++...+++|++.++.
T Consensus       156 ~~~~~~~~-------------------------~~~~~~~~i~~~Dva~~i~~~l~~~~~~g~~~~i~~g~  201 (219)
T 3dqp_A          156 EEATGLID-------------------------INDEVSASNTIGDVADTIKELVMTDHSIGKVISMHNGK  201 (219)
T ss_dssp             SCCCSEEE-------------------------ESSSCCCCEEHHHHHHHHHHHHTCGGGTTEEEEEEECS
T ss_pred             CCCCCccc-------------------------cCCCcCCcccHHHHHHHHHHHHhCccccCcEEEeCCCC
Confidence            86543210                         12567789999999999999999988778999996653

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=100.00  E-value=1.5e-33  Score=248.86  Aligned_cols=222  Identities=19%  Similarity=0.147  Sum_probs=174.3

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccccCC-
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFG-  133 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~~~-  133 (286)
                      ++|+|||||||||||++++++|+++|++|++++|+..+... ....+++++.+|+.|.+.+.++++++|+|||+|+... 
T Consensus        28 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~v~~~~~Dl~d~~~~~~~~~~~d~Vih~A~~~~~  106 (379)
T 2c5a_A           28 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMT-EDMFCDEFHLVDLRVMENCLKVTEGVDHVFNLAADMGG  106 (379)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSC-GGGTCSEEEECCTTSHHHHHHHHTTCSEEEECCCCCCC
T ss_pred             cCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchh-hccCCceEEECCCCCHHHHHHHhCCCCEEEECceecCc
Confidence            46799999999999999999999999999999998765322 2235789999999999999999999999999998753 


Q ss_pred             ------CcchhhhhhhHHHHHHHHHHHHcCCCEEEEEecC-CcCC-----------------CCccccchHHHHHHHHHH
Q 023205          134 ------SNSYMYKINGTANINAIRAASEKGVKRFVYISAA-DFGV-----------------ANYLLQGYYEGKRAAETE  189 (286)
Q Consensus       134 ------~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~-~~~~-----------------~~~~~~~y~~sK~~~E~~  189 (286)
                            +....+++|+.++.+++++|++.++++|||+||. .|+.                 ...+.+.|+.+|..+|++
T Consensus       107 ~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~~V~~SS~~v~~~~~~~~~~~~~~~E~~~~~~~~~~~Y~~sK~~~E~~  186 (379)
T 2c5a_A          107 MGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKLATEEL  186 (379)
T ss_dssp             HHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCSSHHHHHHHHHHHH
T ss_pred             ccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeehheeCCCCCCCccCCCcCcccCCCCCCCChhHHHHHHHHHH
Confidence                  2345678999999999999999999999999994 4543                 123457899999999998


Q ss_pred             HHH---hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCC-CCCC--CCccCCCccHHHHHHHHHHHh
Q 023205          190 LLT---RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQ-LPLV--GPLFTPPVNVTVVAKVAVRAA  263 (286)
Q Consensus       190 ~~~---~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--g~~~~~~i~v~Dva~~~~~~l  263 (286)
                      ++.   ..|++++++||+.+||+........     ...+..+......... ++..  ++..++|++++|+|++++.++
T Consensus       187 ~~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~ai~~~l  261 (379)
T 2c5a_A          187 CKHYNKDFGIECRIGRFHNIYGPFGTWKGGR-----EKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLT  261 (379)
T ss_dssp             HHHHHHHHCCEEEEEEECCEECTTSCCSSSC-----CCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHCCCEEEEEeCceeCcCCCccccc-----ccHHHHHHHHHHhCCCceEEeCCCCeeEEEEEHHHHHHHHHHHh
Confidence            864   4689999999999999976432100     0122333333222222 4433  445789999999999999999


Q ss_pred             cCCCCCCCeeEeccccccccc
Q 023205          264 TDPVFPPGIVDVHGILRYSQK  284 (286)
Q Consensus       264 ~~~~~~~~~~~l~~~~~~s~~  284 (286)
                      +.+  .+++||+++++.++++
T Consensus       262 ~~~--~~~~~ni~~~~~~s~~  280 (379)
T 2c5a_A          262 KSD--FREPVNIGSDEMVSMN  280 (379)
T ss_dssp             HSS--CCSCEEECCCCCEEHH
T ss_pred             hcc--CCCeEEeCCCCccCHH
Confidence            876  3789999999988875

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=100.00  E-value=5.7e-34  Score=249.03  Aligned_cols=224  Identities=18%  Similarity=0.132  Sum_probs=174.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccc----------cCCceeEEeccCCCHhHHHHHhcCCCEE
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDS----------WANNVIWHQGNLLSSDSWKEALDGVTAV  125 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~----------~~~~~~~i~~Dl~d~~~~~~~~~~~d~v  125 (286)
                      +|+|||||||||||++++++|+++|++|++++|+........          ...+++++.+|++|.+.+.++++++|+|
T Consensus        27 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~v  106 (352)
T 1sb8_A           27 PKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGVDYV  106 (352)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTCSEE
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhcCCCEE
Confidence            579999999999999999999999999999999764311100          0257899999999999999999999999


Q ss_pred             EEccccCC------CcchhhhhhhHHHHHHHHHHHHcCCCEEEEEecC-CcCCCC----------ccccchHHHHHHHHH
Q 023205          126 ISCVGGFG------SNSYMYKINGTANINAIRAASEKGVKRFVYISAA-DFGVAN----------YLLQGYYEGKRAAET  188 (286)
Q Consensus       126 i~~a~~~~------~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~-~~~~~~----------~~~~~y~~sK~~~E~  188 (286)
                      ||+|+...      ++...+++|+.++.+++++|++.++++|||+||. +|+...          .+.+.|+.+|..+|+
T Consensus       107 ih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~  186 (352)
T 1sb8_A          107 LHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNEL  186 (352)
T ss_dssp             EECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHHHHHHHHHH
T ss_pred             EECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhcCCCCCCCCCCCCCCCCCChhHHHHHHHHH
Confidence            99999754      3346678999999999999999999999999994 454432          246789999999999


Q ss_pred             HHHH---hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCC--CCCccCCCccHHHHHHHHHHHh
Q 023205          189 ELLT---RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPL--VGPLFTPPVNVTVVAKVAVRAA  263 (286)
Q Consensus       189 ~~~~---~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~~~~i~v~Dva~~~~~~l  263 (286)
                      +++.   ..|++++++||+.+||+.......     ...++..+........++..  .|+..++|++++|+|++++.++
T Consensus       187 ~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~  261 (352)
T 1sb8_A          187 YADVFSRCYGFSTIGLRYFNVFGRRQDPNGA-----YAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANLLAA  261 (352)
T ss_dssp             HHHHHHHHHCCCCEEEEECCEECTTCCCCST-----TCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHcCCCEEEEEECceeCcCCCCCcc-----hhhHHHHHHHHHHCCCCcEEeCCCCceEeeEEHHHHHHHHHHHH
Confidence            8864   458999999999999997643210     01223333333333333333  3455789999999999999998


Q ss_pred             cCC-CCCCCeeEeccccccccc
Q 023205          264 TDP-VFPPGIVDVHGILRYSQK  284 (286)
Q Consensus       264 ~~~-~~~~~~~~l~~~~~~s~~  284 (286)
                      ..+ ...+++||+++++.++++
T Consensus       262 ~~~~~~~~~~~ni~~~~~~s~~  283 (352)
T 1sb8_A          262 TAGLDARNQVYNIAVGGRTSLN  283 (352)
T ss_dssp             TCCGGGCSEEEEESCSCCEEHH
T ss_pred             hccccCCCceEEeCCCCCccHH
Confidence            763 345889999999988875

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=100.00  E-value=5.5e-34  Score=247.95  Aligned_cols=215  Identities=17%  Similarity=0.115  Sum_probs=166.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccccCC--
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFG--  133 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~~~--  133 (286)
                      +|+|||||||||||++++++|+++|++|++++|+..+.. .....+++++.+|+.|++++.++++++|+|||+|+...  
T Consensus        13 ~M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~l~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~~~~   91 (342)
T 2x4g_A           13 HVKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQ-RLAYLEPECRVAEMLDHAGLERALRGLDGVIFSAGYYPSR   91 (342)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGG-GGGGGCCEEEECCTTCHHHHHHHTTTCSEEEEC-------
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhh-hhccCCeEEEEecCCCHHHHHHHHcCCCEEEECCccCcCC
Confidence            469999999999999999999999999999999876532 11223789999999999999999999999999998653  


Q ss_pred             --CcchhhhhhhHHHHHHHHHHHHcCCCEEEEEecC-CcCCCCc-----------c----ccchHHHHHHHHHHHHH--h
Q 023205          134 --SNSYMYKINGTANINAIRAASEKGVKRFVYISAA-DFGVANY-----------L----LQGYYEGKRAAETELLT--R  193 (286)
Q Consensus       134 --~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~-~~~~~~~-----------~----~~~y~~sK~~~E~~~~~--~  193 (286)
                        +....+++|+.++.+++++|++.++++|||+||. +|+....           |    .+.|+.+|..+|++++.  .
T Consensus        92 ~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~E~~~~~p~~~~~~~Y~~sK~~~e~~~~~~~~  171 (342)
T 2x4g_A           92 PRRWQEEVASALGQTNPFYAACLQARVPRILYVGSAYAMPRHPQGLPGHEGLFYDSLPSGKSSYVLCKWALDEQAREQAR  171 (342)
T ss_dssp             -----CHHHHHHHHHHHHHHHHHHHTCSCEEEECCGGGSCCCTTSSCBCTTCCCSSCCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHhhCcCCCCCCCCCCCCCCccccccChHHHHHHHHHHHHHHHhh
Confidence              3456788999999999999999999999999994 4543221           2    67899999999998875  1


Q ss_pred             CCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcCCCCCCCee
Q 023205          194 YPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDPVFPPGIV  273 (286)
Q Consensus       194 ~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~  273 (286)
                      .|++++++||+.+||+.....     . +..    +..........+. ++..+++++++|+|++++.+++++.. +++|
T Consensus       172 ~g~~~~ilrp~~v~g~~~~~~-----~-~~~----~~~~~~~~~~~~~-~~~~~~~i~v~Dva~~~~~~~~~~~~-g~~~  239 (342)
T 2x4g_A          172 NGLPVVIGIPGMVLGELDIGP-----T-TGR----VITAIGNGEMTHY-VAGQRNVIDAAEAGRGLLMALERGRI-GERY  239 (342)
T ss_dssp             TTCCEEEEEECEEECSCCSSC-----S-TTH----HHHHHHTTCCCEE-ECCEEEEEEHHHHHHHHHHHHHHSCT-TCEE
T ss_pred             cCCcEEEEeCCceECCCCccc-----c-HHH----HHHHHHcCCCccc-cCCCcceeeHHHHHHHHHHHHhCCCC-CceE
Confidence            399999999999999875210     0 111    2222222222333 66788999999999999999987765 8899


Q ss_pred             Eeccccccccc
Q 023205          274 DVHGILRYSQK  284 (286)
Q Consensus       274 ~l~~~~~~s~~  284 (286)
                      |+++++ ++++
T Consensus       240 ~v~~~~-~s~~  249 (342)
T 2x4g_A          240 LLTGHN-LEMA  249 (342)
T ss_dssp             EECCEE-EEHH
T ss_pred             EEcCCc-ccHH
Confidence            999998 8875

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=100.00  E-value=1.2e-33  Score=244.76  Aligned_cols=228  Identities=19%  Similarity=0.207  Sum_probs=174.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhc--CCCEEEEccccCC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD--GVTAVISCVGGFG  133 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~--~~d~vi~~a~~~~  133 (286)
                      ||+||||||+||||++++++|+++|++|++++|+..... .....+++++.+|+.|.+.+.++++  ++|+|||+|+...
T Consensus         1 M~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vih~a~~~~   79 (330)
T 2c20_A            1 MNSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHE-DAITEGAKFYNGDLRDKAFLRDVFTQENIEAVMHFAADSL   79 (330)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCG-GGSCTTSEEEECCTTCHHHHHHHHHHSCEEEEEECCCCCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCch-hhcCCCcEEEECCCCCHHHHHHHHhhcCCCEEEECCcccC
Confidence            468999999999999999999999999999999765432 2223478999999999999999998  8999999999764


Q ss_pred             ------CcchhhhhhhHHHHHHHHHHHHcCCCEEEEEecC-CcCCCC----------ccccchHHHHHHHHHHHHH---h
Q 023205          134 ------SNSYMYKINGTANINAIRAASEKGVKRFVYISAA-DFGVAN----------YLLQGYYEGKRAAETELLT---R  193 (286)
Q Consensus       134 ------~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~-~~~~~~----------~~~~~y~~sK~~~E~~~~~---~  193 (286)
                            +....+++|+.++.+++++|++.++++|||+||. +|+...          .+.+.|+.+|..+|++++.   .
T Consensus        80 ~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~  159 (330)
T 2c20_A           80 VGVSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFIFSSTAATYGEVDVDLITEETMTNPTNTYGETKLAIEKMLHWYSQA  159 (330)
T ss_dssp             HHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGGCSCSSSSBCTTSCCCCSSHHHHHHHHHHHHHHHHHHT
T ss_pred             ccccccCHHHHHHHHhHHHHHHHHHHHHcCCCEEEEeCCceeeCCCCCCCCCcCCCCCCCChHHHHHHHHHHHHHHHHHH
Confidence                  3346778999999999999999999999999994 455321          2457899999999998865   3


Q ss_pred             CCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhccc-CCCCCC--------CCCccCCCccHHHHHHHHHHHhc
Q 023205          194 YPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKP-LSQLPL--------VGPLFTPPVNVTVVAKVAVRAAT  264 (286)
Q Consensus       194 ~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--------~g~~~~~~i~v~Dva~~~~~~l~  264 (286)
                      .|++++++||+.+||+...+.+.........++..+...... ...+++        .|+..++|++++|+|++++.+++
T Consensus       160 ~~~~~~ilrp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a~~~~~~  239 (330)
T 2c20_A          160 SNLRYKIFRYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDYIHVEDLVAAHFLGLK  239 (330)
T ss_dssp             SSCEEEEEECSEEECCCTTCSSCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCCSSSSSSCEECEEEHHHHHHHHHHHHH
T ss_pred             hCCcEEEEecCcccCCCCcCccccccccccchHHHHHHHHhhcCCCeEEeCCccccCCCceeEeeEeHHHHHHHHHHHHh
Confidence            589999999999999974332111111112344445443332 223332        34557899999999999999997


Q ss_pred             CCCC--CCCeeEeccccccccc
Q 023205          265 DPVF--PPGIVDVHGILRYSQK  284 (286)
Q Consensus       265 ~~~~--~~~~~~l~~~~~~s~~  284 (286)
                      .+..  .+++||+++++.+|++
T Consensus       240 ~~~~~~~~~~~ni~~~~~~s~~  261 (330)
T 2c20_A          240 DLQNGGESDFYNLGNGNGFSVK  261 (330)
T ss_dssp             HHHTTCCCEEEECCCTTCBCHH
T ss_pred             ccccCCCCCeEEeCCCCCccHH
Confidence            6432  3689999999988875

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=100.00  E-value=4.6e-34  Score=245.47  Aligned_cols=216  Identities=19%  Similarity=0.248  Sum_probs=171.6

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccccCC---
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFG---  133 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~~~---  133 (286)
                      |+|||||||||||++++++|+++|++|++++|+..... .....+++++.+|+.|.+ +.+++++ |+|||+|+...   
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~Dl~d~~-~~~~~~~-d~vih~A~~~~~~~   77 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRR-EFVNPSAELHVRDLKDYS-WGAGIKG-DVVFHFAANPEVRL   77 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCG-GGSCTTSEEECCCTTSTT-TTTTCCC-SEEEECCSSCSSSG
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCch-hhcCCCceEEECccccHH-HHhhcCC-CEEEECCCCCCchh
Confidence            58999999999999999999999999999999876532 223568999999999998 8888888 99999998542   


Q ss_pred             ---CcchhhhhhhHHHHHHHHHHHHcCCCEEEEEecC-CcCCCC----------ccccchHHHHHHHHHHHHH---hCCC
Q 023205          134 ---SNSYMYKINGTANINAIRAASEKGVKRFVYISAA-DFGVAN----------YLLQGYYEGKRAAETELLT---RYPY  196 (286)
Q Consensus       134 ---~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~-~~~~~~----------~~~~~y~~sK~~~E~~~~~---~~g~  196 (286)
                         ++...+++|+.++.+++++|++.++++|||+||. +|+...          .+.+.|+.+|..+|++++.   ..|+
T Consensus        78 ~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~g~  157 (312)
T 3ko8_A           78 STTEPIVHFNENVVATFNVLEWARQTGVRTVVFASSSTVYGDADVIPTPEEEPYKPISVYGAAKAAGEVMCATYARLFGV  157 (312)
T ss_dssp             GGSCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCC
T ss_pred             hhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCcHHHhCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHhCC
Confidence               2345678999999999999999999999999994 454322          3467899999999998865   4599


Q ss_pred             cEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCC--CCccCCCccHHHHHHHHHHHhcC---CCCCCC
Q 023205          197 GGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLV--GPLFTPPVNVTVVAKVAVRAATD---PVFPPG  271 (286)
Q Consensus       197 ~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~i~v~Dva~~~~~~l~~---~~~~~~  271 (286)
                      +++++||+.+|||.....         ....++.........++..  |+..+++++++|+|++++.++++   +...++
T Consensus       158 ~~~~lrp~~v~g~~~~~~---------~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~  228 (312)
T 3ko8_A          158 RCLAVRYANVVGPRLRHG---------VIYDFIMKLRRNPNVLEVLGDGTQRKSYLYVRDAVEATLAAWKKFEEMDAPFL  228 (312)
T ss_dssp             EEEEEEECEEECTTCCSS---------HHHHHHHHHHHCTTEEEEC----CEECEEEHHHHHHHHHHHHHHHHHSCCSEE
T ss_pred             CEEEEeeccccCcCCCCC---------hHHHHHHHHHhCCCCeEEcCCCCeEEeeEEHHHHHHHHHHHHHhccccCCCCc
Confidence            999999999999976432         1223333333333344333  34578999999999999999987   455588


Q ss_pred             eeEeccccccccc
Q 023205          272 IVDVHGILRYSQK  284 (286)
Q Consensus       272 ~~~l~~~~~~s~~  284 (286)
                      +||+++++.++++
T Consensus       229 ~~ni~~~~~~s~~  241 (312)
T 3ko8_A          229 ALNVGNVDAVRVL  241 (312)
T ss_dssp             EEEESCSSCEEHH
T ss_pred             EEEEcCCCceeHH
Confidence            9999999988875

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=100.00  E-value=1.9e-33  Score=248.02  Aligned_cols=228  Identities=18%  Similarity=0.121  Sum_probs=174.9

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCC-CeEEEEecCCCccccccc-CCceeEEeccCCCHhHHHHHhcCCCEEEEccccC
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRG-LTVASLSRSGRSSLRDSW-ANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGF  132 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g-~~V~~l~R~~~~~~~~~~-~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~~  132 (286)
                      .+|+|||||||||||++++++|+++| ++|++++|+......... ..+++++.+|+.|++.+.++++++|+|||+|+..
T Consensus        31 ~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~l~~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vih~A~~~  110 (377)
T 2q1s_A           31 ANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVPDHPAVRFSETSITDDALLASLQDEYDYVFHLATYH  110 (377)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGGSCCCTTEEEECSCTTCHHHHHHCCSCCSEEEECCCCS
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhhccCCCceEEEECCCCCHHHHHHHhhCCCEEEECCCcc
Confidence            35799999999999999999999999 999999998655322221 4689999999999999999999999999999976


Q ss_pred             C------CcchhhhhhhHHHHHHHHHHHHc-CCCEEEEEecC-CcCC---------------CC-ccccchHHHHHHHHH
Q 023205          133 G------SNSYMYKINGTANINAIRAASEK-GVKRFVYISAA-DFGV---------------AN-YLLQGYYEGKRAAET  188 (286)
Q Consensus       133 ~------~~~~~~~~~~~~~~~l~~~a~~~-~v~~~v~~Ss~-~~~~---------------~~-~~~~~y~~sK~~~E~  188 (286)
                      .      ++...+++|+.++.+++++|++. ++++|||+||. +|+.               +. .+.+.|+.+|..+|+
T Consensus       111 ~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~~~~~~~~Y~~sK~~~E~  190 (377)
T 2q1s_A          111 GNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAAGCSIAEKTFDDAKATEETDIVSLHNNDSPYSMSKIFGEF  190 (377)
T ss_dssp             CHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEEEC--------------CCCCCCCSSCCCSHHHHHHHHHHH
T ss_pred             CchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCCHHHcCCCCCCCcCcccccccccccCCCCchHHHHHHHHH
Confidence            4      33467789999999999999998 89999999994 3431               11 445789999999999


Q ss_pred             HHHH---hCCCcEEEEeeCeeecCCCC---Ccccc-CccccCchHHHHHHhcccCCCCCCC--CCccCCCccHHHHHHH-
Q 023205          189 ELLT---RYPYGGVILRPGFIYGTRTV---GGMKL-PLGVIGSPMEMVLQHAKPLSQLPLV--GPLFTPPVNVTVVAKV-  258 (286)
Q Consensus       189 ~~~~---~~g~~~~ilRp~~v~g~~~~---~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~i~v~Dva~~-  258 (286)
                      ++++   ..|++++++||+.+||+...   +.|.. +......++..+........+++..  |+..++|++++|+|++ 
T Consensus       191 ~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~  270 (377)
T 2q1s_A          191 YSVYYHKQHQLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKGMPLPLENGGVATRDFIFVEDVANGL  270 (377)
T ss_dssp             HHHHHHHHHCCCEEEEEECCEECTTCCTTCSSCCSSGGGTSCSHHHHHHHHHHTTCCCCCSGGGCCEECCEEHHHHHHHH
T ss_pred             HHHHHHHHhCCCEEEEeeccEECCCCcccccccccCcccccccHHHHHHHHHHcCCCeEEeCCCCeEEeeEEHHHHHHHH
Confidence            8875   35899999999999999761   11100 0000012334444444444444443  4467899999999999 


Q ss_pred             HHHHhcCCCCCCCeeEeccccccccc
Q 023205          259 AVRAATDPVFPPGIVDVHGILRYSQK  284 (286)
Q Consensus       259 ~~~~l~~~~~~~~~~~l~~~~~~s~~  284 (286)
                      ++.+++++. .+ +||+++++.++++
T Consensus       271 i~~~~~~~~-~g-~~~i~~~~~~s~~  294 (377)
T 2q1s_A          271 IACAADGTP-GG-VYNIASGKETSIA  294 (377)
T ss_dssp             HHHHHHCCT-TE-EEECCCCCCEEHH
T ss_pred             HHHHHhcCC-CC-eEEecCCCceeHH
Confidence            999998866 46 9999999988875

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=100.00  E-value=2.9e-33  Score=243.04  Aligned_cols=218  Identities=20%  Similarity=0.217  Sum_probs=172.4

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHC---C---CeEEEEecCCCcc----cccc-cCCceeEEeccCCCHhHHHHHhcCCCEE
Q 023205           57 EKLLVLGGNGFVGSHICREALDR---G---LTVASLSRSGRSS----LRDS-WANNVIWHQGNLLSSDSWKEALDGVTAV  125 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~---g---~~V~~l~R~~~~~----~~~~-~~~~~~~i~~Dl~d~~~~~~~~~~~d~v  125 (286)
                      |+|||||||||||++++++|+++   |   ++|++++|.....    .... ...+++++.+|++|++.+.+++.++|+|
T Consensus         1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~V   80 (337)
T 1r6d_A            1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLARELRGVDAI   80 (337)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHTTTCCEE
T ss_pred             CeEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhhhcccCCCeEEEEcCCCCHHHHHHHhcCCCEE
Confidence            47999999999999999999997   7   9999999975321    1111 1357999999999999999999999999


Q ss_pred             EEccccCC------CcchhhhhhhHHHHHHHHHHHHcCCCEEEEEecC-CcCCC----------CccccchHHHHHHHHH
Q 023205          126 ISCVGGFG------SNSYMYKINGTANINAIRAASEKGVKRFVYISAA-DFGVA----------NYLLQGYYEGKRAAET  188 (286)
Q Consensus       126 i~~a~~~~------~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~-~~~~~----------~~~~~~y~~sK~~~E~  188 (286)
                      ||+|+...      ++...+++|+.++.+++++|++.++++|||+||. +|+..          ..+.+.|+.+|..+|+
T Consensus        81 ih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~  160 (337)
T 1r6d_A           81 VHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSIDSGSWTESSPLEPNSPYAASKAGSDL  160 (337)
T ss_dssp             EECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGCCCSSSCBCTTSCCCCCSHHHHHHHHHHH
T ss_pred             EECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecchHHhCCCCCCCCCCCCCCCCCCchHHHHHHHHH
Confidence            99999764      3456788999999999999999999999999994 45532          2346789999999999


Q ss_pred             HHHH---hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCC--CCccCCCccHHHHHHHHHHHh
Q 023205          189 ELLT---RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLV--GPLFTPPVNVTVVAKVAVRAA  263 (286)
Q Consensus       189 ~~~~---~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~i~v~Dva~~~~~~l  263 (286)
                      +++.   ..|++++++||+.+||+.....         .++..+.........++..  ++..+++++++|+|++++.++
T Consensus       161 ~~~~~~~~~g~~~~ilrp~~v~G~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~  231 (337)
T 1r6d_A          161 VARAYHRTYGLDVRITRCCNNYGPYQHPE---------KLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVL  231 (337)
T ss_dssp             HHHHHHHHHCCCEEEEEECEEECTTCCTT---------SHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHHCCCEEEEEeeeeECCCCCCC---------ChHHHHHHHHhcCCCcEEeCCCCeeEeeEeHHHHHHHHHHHH
Confidence            8764   4689999999999999976421         1233333333333344433  445679999999999999999


Q ss_pred             cCCCCCCCeeEeccccccccc
Q 023205          264 TDPVFPPGIVDVHGILRYSQK  284 (286)
Q Consensus       264 ~~~~~~~~~~~l~~~~~~s~~  284 (286)
                      +.+. .+++||+++++.++++
T Consensus       232 ~~~~-~g~~~~v~~~~~~s~~  251 (337)
T 1r6d_A          232 AGGR-AGEIYHIGGGLELTNR  251 (337)
T ss_dssp             HHCC-TTCEEEECCCCEEEHH
T ss_pred             hCCC-CCCEEEeCCCCCccHH
Confidence            7654 4789999999988875

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=100.00  E-value=1e-33  Score=243.44  Aligned_cols=216  Identities=18%  Similarity=0.249  Sum_probs=168.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccccCC--
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFG--  133 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~~~--  133 (286)
                      ||+|||||||||||++++++|+++| .+++++|...... .....+++++.+|+.| +++.++++++|+|||+|+...  
T Consensus         1 M~~vlVTGatG~iG~~l~~~L~~~g-~~v~~~~~~~~~~-~~~~~~~~~~~~Dl~~-~~~~~~~~~~d~vih~a~~~~~~   77 (313)
T 3ehe_A            1 MSLIVVTGGAGFIGSHVVDKLSESN-EIVVIDNLSSGNE-EFVNEAARLVKADLAA-DDIKDYLKGAEEVWHIAANPDVR   77 (313)
T ss_dssp             --CEEEETTTSHHHHHHHHHHTTTS-CEEEECCCSSCCG-GGSCTTEEEECCCTTT-SCCHHHHTTCSEEEECCCCCCCC
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCC-CEEEEEcCCCCCh-hhcCCCcEEEECcCCh-HHHHHHhcCCCEEEECCCCCChh
Confidence            4689999999999999999999999 6666665543322 2235689999999999 899999999999999998542  


Q ss_pred             ----CcchhhhhhhHHHHHHHHHHHHcCCCEEEEEecC-CcCCC----------CccccchHHHHHHHHHHHHH---hCC
Q 023205          134 ----SNSYMYKINGTANINAIRAASEKGVKRFVYISAA-DFGVA----------NYLLQGYYEGKRAAETELLT---RYP  195 (286)
Q Consensus       134 ----~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~-~~~~~----------~~~~~~y~~sK~~~E~~~~~---~~g  195 (286)
                          ++...+++|+.++.++++++++.++++|||+||. +|+..          ..+.+.|+.+|..+|.+++.   ..|
T Consensus        78 ~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~g  157 (313)
T 3ehe_A           78 IGAENPDEIYRNNVLATYRLLEAMRKAGVSRIVFTSTSTVYGEAKVIPTPEDYPTHPISLYGASKLACEALIESYCHTFD  157 (313)
T ss_dssp             -CCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEECCGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHTT
T ss_pred             hhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCchHHhCcCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcC
Confidence                3356788999999999999999999999999994 45432          23467899999999998864   579


Q ss_pred             CcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCC--CCccCCCccHHHHHHHHHHHhcCCCCCCCee
Q 023205          196 YGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLV--GPLFTPPVNVTVVAKVAVRAATDPVFPPGIV  273 (286)
Q Consensus       196 ~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~  273 (286)
                      ++++++||+.+||+.....         ....++.........++..  |+..++|++++|+|++++.+++. ...+++|
T Consensus       158 ~~~~ilRp~~v~G~~~~~~---------~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~-~~~~~~~  227 (313)
T 3ehe_A          158 MQAWIYRFANVIGRRSTHG---------VIYDFIMKLKRNPEELEILGNGEQNKSYIYISDCVDAMLFGLRG-DERVNIF  227 (313)
T ss_dssp             CEEEEEECSCEESTTCCCS---------HHHHHHHHHHHCTTEEEESTTSCCEECCEEHHHHHHHHHHHTTC-CSSEEEE
T ss_pred             CCEEEEeeccccCcCCCcC---------hHHHHHHHHHcCCCceEEeCCCCeEEeEEEHHHHHHHHHHHhcc-CCCCceE
Confidence            9999999999999976432         1223333333333344333  44578999999999999999984 3447899


Q ss_pred             Eeccccccccc
Q 023205          274 DVHGILRYSQK  284 (286)
Q Consensus       274 ~l~~~~~~s~~  284 (286)
                      |+++++.++++
T Consensus       228 ni~~~~~~s~~  238 (313)
T 3ehe_A          228 NIGSEDQIKVK  238 (313)
T ss_dssp             ECCCSCCEEHH
T ss_pred             EECCCCCeeHH
Confidence            99999998875

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=100.00  E-value=3.7e-33  Score=244.84  Aligned_cols=222  Identities=18%  Similarity=0.138  Sum_probs=175.5

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHH--CCCeEEEEecCCC------------cccccccCCceeEEeccCCCHhHHHHH-h
Q 023205           55 PSEKLLVLGGNGFVGSHICREALD--RGLTVASLSRSGR------------SSLRDSWANNVIWHQGNLLSSDSWKEA-L  119 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~--~g~~V~~l~R~~~------------~~~~~~~~~~~~~i~~Dl~d~~~~~~~-~  119 (286)
                      .+|+||||||+||||++++++|++  +|++|++++|+..            .........+++++.+|++|++.+.++ .
T Consensus         9 ~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   88 (362)
T 3sxp_A            9 ENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLRRLEK   88 (362)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHHHHTT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHHHhhc
Confidence            367999999999999999999999  9999999999765            112222345789999999999999999 8


Q ss_pred             cCCCEEEEccccCC----CcchhhhhhhHHHHHHHHHHHHcCCCEEEEEecC-CcCCCC---------ccccchHHHHHH
Q 023205          120 DGVTAVISCVGGFG----SNSYMYKINGTANINAIRAASEKGVKRFVYISAA-DFGVAN---------YLLQGYYEGKRA  185 (286)
Q Consensus       120 ~~~d~vi~~a~~~~----~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~-~~~~~~---------~~~~~y~~sK~~  185 (286)
                      .++|+|||||+...    ++...+++|+.++.+++++|++.+++ |||+||. +|+...         .|.+.|+.+|..
T Consensus        89 ~~~D~vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~-~V~~SS~~vyg~~~~~~~E~~~~~p~~~Y~~sK~~  167 (362)
T 3sxp_A           89 LHFDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSKKAK-VIYASSAGVYGNTKAPNVVGKNESPENVYGFSKLC  167 (362)
T ss_dssp             SCCSEEEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHTTCE-EEEEEEGGGGCSCCSSBCTTSCCCCSSHHHHHHHH
T ss_pred             cCCCEEEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHcCCc-EEEeCcHHHhCCCCCCCCCCCCCCCCChhHHHHHH
Confidence            89999999999653    34567899999999999999999986 9999994 455432         245679999999


Q ss_pred             HHHHHHHhCC-CcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCC--CCccCCCccHHHHHHHHHHH
Q 023205          186 AETELLTRYP-YGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLV--GPLFTPPVNVTVVAKVAVRA  262 (286)
Q Consensus       186 ~E~~~~~~~g-~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~i~v~Dva~~~~~~  262 (286)
                      +|++++.... ++++++||+.+|||.......     ....+..+.........++..  |+..++|++++|+|++++.+
T Consensus       168 ~E~~~~~~~~~~~~~~lR~~~v~Gp~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~ai~~~  242 (362)
T 3sxp_A          168 MDEFVLSHSNDNVQVGLRYFNVYGPREFYKEK-----TASMVLQLALGAMAFKEVKLFEFGEQLRDFVYIEDVIQANVKA  242 (362)
T ss_dssp             HHHHHHHTTTTSCEEEEEECSEESTTCGGGGG-----GSCHHHHHHHHHHTTSEEECSGGGCCEEECEEHHHHHHHHHHH
T ss_pred             HHHHHHHHhccCCEEEEEeCceeCcCCCCCCc-----chhHHHHHHHHHHhCCCeEEECCCCeEEccEEHHHHHHHHHHH
Confidence            9998887322 899999999999998643210     123444455544444444443  34578999999999999999


Q ss_pred             hcCCCCCCCeeEeccccccccc
Q 023205          263 ATDPVFPPGIVDVHGILRYSQK  284 (286)
Q Consensus       263 l~~~~~~~~~~~l~~~~~~s~~  284 (286)
                      ++.+.. + +||+++++.++|+
T Consensus       243 ~~~~~~-g-~~~i~~~~~~s~~  262 (362)
T 3sxp_A          243 MKAQKS-G-VYNVGYSQARSYN  262 (362)
T ss_dssp             TTCSSC-E-EEEESCSCEEEHH
T ss_pred             HhcCCC-C-EEEeCCCCCccHH
Confidence            988763 5 9999999998875

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=100.00  E-value=1.2e-33  Score=233.57  Aligned_cols=204  Identities=21%  Similarity=0.230  Sum_probs=165.9

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCce-eEEeccCCCHhHHHHHhcCCCEEEEccccC
Q 023205           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNV-IWHQGNLLSSDSWKEALDGVTAVISCVGGF  132 (286)
Q Consensus        54 ~~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~-~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~~  132 (286)
                      .+.|+|+||||||+||++++++|+++|++|++++|++++.. .....++ +++.+|++  +.+.++++++|+|||+||..
T Consensus        19 l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~-~~~~~~~~~~~~~Dl~--~~~~~~~~~~D~vi~~ag~~   95 (236)
T 3e8x_A           19 FQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGP-ELRERGASDIVVANLE--EDFSHAFASIDAVVFAAGSG   95 (236)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHH-HHHHTTCSEEEECCTT--SCCGGGGTTCSEEEECCCCC
T ss_pred             cCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHH-HHHhCCCceEEEcccH--HHHHHHHcCCCEEEECCCCC
Confidence            45789999999999999999999999999999999876532 2222478 99999998  77888999999999999976


Q ss_pred             C--CcchhhhhhhHHHHHHHHHHHHcCCCEEEEEecCCcCCCC---ccccchHHHHHHHHHHHHHhCCCcEEEEeeCeee
Q 023205          133 G--SNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGVAN---YLLQGYYEGKRAAETELLTRYPYGGVILRPGFIY  207 (286)
Q Consensus       133 ~--~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~~~~~~~---~~~~~y~~sK~~~E~~~~~~~g~~~~ilRp~~v~  207 (286)
                      .  .+...+++|+.++.++++++++.++++||++||.......   .+...|+.+|..+|++++ ..|++++++||+.++
T Consensus        96 ~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~~~~~~~~~Y~~sK~~~e~~~~-~~gi~~~~lrpg~v~  174 (236)
T 3e8x_A           96 PHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVGTVDPDQGPMNMRHYLVAKRLADDELK-RSSLDYTIVRPGPLS  174 (236)
T ss_dssp             TTSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCTTCSCGGGSCGGGHHHHHHHHHHHHHHH-HSSSEEEEEEECSEE
T ss_pred             CCCCccccchhhHHHHHHHHHHHHHcCCCEEEEEecCCCCCCCCChhhhhhHHHHHHHHHHHHH-HCCCCEEEEeCCccc
Confidence            4  3456788999999999999999999999999994322222   356789999999999877 589999999999999


Q ss_pred             cCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcCCCCCCCeeEeccccccccc
Q 023205          208 GTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDPVFPPGIVDVHGILRYSQK  284 (286)
Q Consensus       208 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~l~~~~~~s~~  284 (286)
                      |+...+...                      ....++...++++++|+|++++.+++++...+++|++.++ .++++
T Consensus       175 ~~~~~~~~~----------------------~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~v~~~-~~~~~  228 (236)
T 3e8x_A          175 NEESTGKVT----------------------VSPHFSEITRSITRHDVAKVIAELVDQQHTIGKTFEVLNG-DTPIA  228 (236)
T ss_dssp             CSCCCSEEE----------------------EESSCSCCCCCEEHHHHHHHHHHHTTCGGGTTEEEEEEEC-SEEHH
T ss_pred             CCCCCCeEE----------------------eccCCCcccCcEeHHHHHHHHHHHhcCccccCCeEEEeCC-CcCHH
Confidence            986533210                      0112344678999999999999999988777899999887 46654

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=100.00  E-value=5.2e-33  Score=241.75  Aligned_cols=230  Identities=23%  Similarity=0.229  Sum_probs=176.5

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCccccc------ccCCceeEEeccCCCHhHHHHHhc--CCCEEE
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRD------SWANNVIWHQGNLLSSDSWKEALD--GVTAVI  126 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~------~~~~~~~~i~~Dl~d~~~~~~~~~--~~d~vi  126 (286)
                      ++|+||||||+||||++++++|+++|++|++++|+.......      ....+++++.+|++|++++.++++  ++|+||
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vi   83 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDAHPITAAI   83 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHHSCCCEEE
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhccCCcEEE
Confidence            357999999999999999999999999999999986653211      113578999999999999999998  899999


Q ss_pred             EccccCC------CcchhhhhhhHHHHHHHHHHHHcCCCEEEEEecC-CcCCCC----------ccccchHHHHHHHHHH
Q 023205          127 SCVGGFG------SNSYMYKINGTANINAIRAASEKGVKRFVYISAA-DFGVAN----------YLLQGYYEGKRAAETE  189 (286)
Q Consensus       127 ~~a~~~~------~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~-~~~~~~----------~~~~~y~~sK~~~E~~  189 (286)
                      |+|+...      .+...++.|+.++.++++++++.++++|||+||. .|+...          .+.+.|+.+|..+|++
T Consensus        84 h~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~  163 (341)
T 3enk_A           84 HFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAVKRIVFSSSATVYGVPERSPIDETFPLSATNPYGQTKLMAEQI  163 (341)
T ss_dssp             ECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGBCSCSSSSBCTTSCCBCSSHHHHHHHHHHHH
T ss_pred             ECccccccCccccChHHHHHHHHHHHHHHHHHHHhCCCCEEEEEecceEecCCCCCCCCCCCCCCCCChhHHHHHHHHHH
Confidence            9999753      2346778999999999999999999999999994 454322          2457899999999998


Q ss_pred             HHH---hC-CCcEEEEeeCeeecCCCCCcccc-CccccCchHHHHHHhccc-CCCCCC--------CCCccCCCccHHHH
Q 023205          190 LLT---RY-PYGGVILRPGFIYGTRTVGGMKL-PLGVIGSPMEMVLQHAKP-LSQLPL--------VGPLFTPPVNVTVV  255 (286)
Q Consensus       190 ~~~---~~-g~~~~ilRp~~v~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~--------~g~~~~~~i~v~Dv  255 (286)
                      ++.   .. +++++++||+.+|||...+.+.. +.+....+..++...... ...++.        .|+..++|+|++|+
T Consensus       164 ~~~~~~~~~~~~~~~lRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dv  243 (341)
T 3enk_A          164 LRDVEAADPSWRVATLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQVAVGKLEKLRVFGSDYPTPDGTGVRDYIHVVDL  243 (341)
T ss_dssp             HHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCSSHHHHHHHHHHTSSSCEEEECSCSSSTTSSCEECEEEHHHH
T ss_pred             HHHHhhcCCCceEEEEeeccccCCccccccCCCcccCccchHHHHHHHHhcCCCceEEeCCccCCCCCCeeEeeEEHHHH
Confidence            864   33 59999999999999975432211 111123344444443322 223332        34567899999999


Q ss_pred             HHHHHHHhcC--CCCCCCeeEeccccccccc
Q 023205          256 AKVAVRAATD--PVFPPGIVDVHGILRYSQK  284 (286)
Q Consensus       256 a~~~~~~l~~--~~~~~~~~~l~~~~~~s~~  284 (286)
                      |++++.+++.  +...+++||+++++.++++
T Consensus       244 a~a~~~~~~~~~~~~~~~~~ni~~~~~~s~~  274 (341)
T 3enk_A          244 ARGHIAALDALERRDASLTVNLGTGRGYSVL  274 (341)
T ss_dssp             HHHHHHHHHHHHHHTSCEEEEESCSCCEEHH
T ss_pred             HHHHHHHHHhhhcCCcceEEEeCCCCceeHH
Confidence            9999999986  2345899999999998875

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=100.00  E-value=5.6e-33  Score=242.21  Aligned_cols=218  Identities=14%  Similarity=0.099  Sum_probs=172.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHC--CCeEEEEecCCCcc----cccccCCceeEEeccCCCHhHHHHHhcCCCEEEEcc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDR--GLTVASLSRSGRSS----LRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCV  129 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~--g~~V~~l~R~~~~~----~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a  129 (286)
                      ||+||||||+||||++++++|+++  |++|++++|+....    .......+++++.+|++|++.+.++++++|+|||+|
T Consensus         4 m~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A   83 (348)
T 1oc2_A            4 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAAKADAIVHYA   83 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHTTCSEEEECC
T ss_pred             CcEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhhccCCeEEEECCCCCHHHHHHHhhcCCEEEECC
Confidence            579999999999999999999998  89999999975321    111223589999999999999999999999999999


Q ss_pred             ccCC------CcchhhhhhhHHHHHHHHHHHHcCCCEEEEEecC-CcCCC----------------------CccccchH
Q 023205          130 GGFG------SNSYMYKINGTANINAIRAASEKGVKRFVYISAA-DFGVA----------------------NYLLQGYY  180 (286)
Q Consensus       130 ~~~~------~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~-~~~~~----------------------~~~~~~y~  180 (286)
                      +...      +....+++|+.++.+++++|.+.++ +|||+||. +|+..                      ..+.+.|+
T Consensus        84 ~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~-~~v~~SS~~vyg~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~Y~  162 (348)
T 1oc2_A           84 AESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDI-RFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYS  162 (348)
T ss_dssp             SCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCCCCCSHHH
T ss_pred             cccCccchhhCHHHHHHHHHHHHHHHHHHHHHhCC-eEEEecccceeCCCcccccccccccccCCCcCCCCCCCCCCccH
Confidence            9764      3456788999999999999999888 99999994 45432                      12457899


Q ss_pred             HHHHHHHHHHHH---hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCC--CCCccCCCccHHHH
Q 023205          181 EGKRAAETELLT---RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPL--VGPLFTPPVNVTVV  255 (286)
Q Consensus       181 ~sK~~~E~~~~~---~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~~~~i~v~Dv  255 (286)
                      .+|..+|++++.   ..|++++++||+.+||+.....         .++..+.........++.  .++...++++++|+
T Consensus       163 ~sK~~~e~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv  233 (348)
T 1oc2_A          163 STKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIE---------KFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDH  233 (348)
T ss_dssp             HHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTT---------SHHHHHHHHHHHTCCCEEETTSCCEEECEEHHHH
T ss_pred             HHHHHHHHHHHHHHHHhCCCEEEEeeceeeCCCCCcc---------chHHHHHHHHHcCCCceEecCCCceEeeEEHHHH
Confidence            999999998865   3589999999999999976422         123333333333333433  34457899999999


Q ss_pred             HHHHHHHhcCCCCCCCeeEeccccccccc
Q 023205          256 AKVAVRAATDPVFPPGIVDVHGILRYSQK  284 (286)
Q Consensus       256 a~~~~~~l~~~~~~~~~~~l~~~~~~s~~  284 (286)
                      |++++.+++.+. .+++||+++++.++++
T Consensus       234 a~~~~~~~~~~~-~g~~~~i~~~~~~s~~  261 (348)
T 1oc2_A          234 STGVWAILTKGR-MGETYLIGADGEKNNK  261 (348)
T ss_dssp             HHHHHHHHHHCC-TTCEEEECCSCEEEHH
T ss_pred             HHHHHHHhhCCC-CCCeEEeCCCCCCCHH
Confidence            999999997654 4889999999888875

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=100.00  E-value=5.4e-33  Score=239.69  Aligned_cols=215  Identities=13%  Similarity=0.071  Sum_probs=169.7

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcC--CCEEEEccccC
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDG--VTAVISCVGGF  132 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~--~d~vi~~a~~~  132 (286)
                      .+++||||||+||||++++++|+++|++|++++|+... ..    .+++++.+|++|++.+.+++++  +|+|||+|+..
T Consensus        11 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~----l~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~   85 (321)
T 2pk3_A           11 GSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL----PNVEMISLDIMDSQRVKKVISDIKPDYIFHLAAKS   85 (321)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC----TTEEEEECCTTCHHHHHHHHHHHCCSEEEECCSCC
T ss_pred             CcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc----ceeeEEECCCCCHHHHHHHHHhcCCCEEEEcCccc
Confidence            36799999999999999999999999999999998765 21    1789999999999999999986  99999999976


Q ss_pred             C------CcchhhhhhhHHHHHHHHHHHHc-CCCEEEEEecC-CcCCC------------CccccchHHHHHHHHHHHHH
Q 023205          133 G------SNSYMYKINGTANINAIRAASEK-GVKRFVYISAA-DFGVA------------NYLLQGYYEGKRAAETELLT  192 (286)
Q Consensus       133 ~------~~~~~~~~~~~~~~~l~~~a~~~-~v~~~v~~Ss~-~~~~~------------~~~~~~y~~sK~~~E~~~~~  192 (286)
                      .      +....+++|+.++.+++++|++. ++++|||+||. +|+..            ..+.+.|+.+|..+|++++.
T Consensus        86 ~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~  165 (321)
T 2pk3_A           86 SVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILTIGSSEEYGMILPEESPVSEENQLRPMSPYGVSKASVGMLARQ  165 (321)
T ss_dssp             CHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEEGGGTBSCCGGGCSBCTTSCCBCCSHHHHHHHHHHHHHHH
T ss_pred             chhhhhhcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEccHHhcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHH
Confidence            4      34567889999999999999876 68999999994 45542            13567899999999998865


Q ss_pred             ---hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhccc---C--CCCCC--CCCccCCCccHHHHHHHHHHH
Q 023205          193 ---RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKP---L--SQLPL--VGPLFTPPVNVTVVAKVAVRA  262 (286)
Q Consensus       193 ---~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~---~--~~~~~--~g~~~~~~i~v~Dva~~~~~~  262 (286)
                         ..|++++++||+.+|||.....         .....+......   .  ..+..  .++...++++++|+|++++.+
T Consensus       166 ~~~~~gi~~~ilrp~~v~g~~~~~~---------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~  236 (321)
T 2pk3_A          166 YVKAYGMDIIHTRTFNHIGPGQSLG---------FVTQDFAKQIVDIEMEKQEPIIKVGNLEAVRDFTDVRDIVQAYWLL  236 (321)
T ss_dssp             HHHHHCCEEEEEEECEEECTTCCTT---------SHHHHHHHHHHHHHTTSSCSEEEESCSSCEEEEEEHHHHHHHHHHH
T ss_pred             HHHHcCCCEEEEEeCcccCcCCCCC---------chHHHHHHHHHHHhcCCCCCeEEeCCCCcEEeeEEHHHHHHHHHHH
Confidence               3489999999999999976432         112222222111   1  22222  244578899999999999999


Q ss_pred             hcCCCCCCCeeEeccccccccc
Q 023205          263 ATDPVFPPGIVDVHGILRYSQK  284 (286)
Q Consensus       263 l~~~~~~~~~~~l~~~~~~s~~  284 (286)
                      ++.+. .+++||+++++.++++
T Consensus       237 ~~~~~-~g~~~~i~~~~~~s~~  257 (321)
T 2pk3_A          237 SQYGK-TGDVYNVCSGIGTRIQ  257 (321)
T ss_dssp             HHHCC-TTCEEEESCSCEEEHH
T ss_pred             HhCCC-CCCeEEeCCCCCeeHH
Confidence            98763 4789999999988875

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=100.00  E-value=1.3e-32  Score=238.75  Aligned_cols=219  Identities=20%  Similarity=0.208  Sum_probs=170.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCC--CeEEEEecCCCcc----cccc-cCCceeEEeccCCCHhHHHHHhcCCCEEEEc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRG--LTVASLSRSGRSS----LRDS-WANNVIWHQGNLLSSDSWKEALDGVTAVISC  128 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g--~~V~~l~R~~~~~----~~~~-~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~  128 (286)
                      .|+||||||+||||++++++|+++|  ++|++++|.....    .... ...+++++.+|++|++.+.+++.++|+|||+
T Consensus         3 ~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~   82 (336)
T 2hun_A            3 SMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKDLEDDPRYTFVKGDVADYELVKELVRKVDGVVHL   82 (336)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHTCSEEEEC
T ss_pred             CCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHHhhhccCCceEEEEcCCCCHHHHHHHhhCCCEEEEC
Confidence            3689999999999999999999986  8999999975321    1111 1357899999999999999999999999999


Q ss_pred             cccCC------CcchhhhhhhHHHHHHHHHHHHcCC-CEEEEEecC-CcCCC----------CccccchHHHHHHHHHHH
Q 023205          129 VGGFG------SNSYMYKINGTANINAIRAASEKGV-KRFVYISAA-DFGVA----------NYLLQGYYEGKRAAETEL  190 (286)
Q Consensus       129 a~~~~------~~~~~~~~~~~~~~~l~~~a~~~~v-~~~v~~Ss~-~~~~~----------~~~~~~y~~sK~~~E~~~  190 (286)
                      |+...      +....+++|+.++.+++++|.+.+. ++|||+||. +|+..          ..+.+.|+.+|..+|+++
T Consensus        83 A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~  162 (336)
T 2hun_A           83 AAESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPEVRFVHVSTDEVYGDILKGSFTENDRLMPSSPYSATKAASDMLV  162 (336)
T ss_dssp             CCCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEEGGGGCCCSSSCBCTTBCCCCCSHHHHHHHHHHHHH
T ss_pred             CCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEeccHHHHCCCCCCCcCCCCCCCCCCccHHHHHHHHHHH
Confidence            99764      3456788999999999999998875 799999995 45532          234678999999999988


Q ss_pred             HH---hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCC--CCccCCCccHHHHHHHHHHHhcC
Q 023205          191 LT---RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLV--GPLFTPPVNVTVVAKVAVRAATD  265 (286)
Q Consensus       191 ~~---~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~i~v~Dva~~~~~~l~~  265 (286)
                      +.   ..|++++++||+.+||+.....         .++..+.........++..  ++...++++++|+|++++.+++.
T Consensus       163 ~~~~~~~~~~~~ilrp~~v~g~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~  233 (336)
T 2hun_A          163 LGWTRTYNLNASITRCTNNYGPYQFPE---------KLIPKTIIRASLGLKIPIYGTGKNVRDWLYVEDHVRAIELVLLK  233 (336)
T ss_dssp             HHHHHHTTCEEEEEEECEEESTTCCTT---------SHHHHHHHHHHTTCCEEEETC---CEEEEEHHHHHHHHHHHHHH
T ss_pred             HHHHHHhCCCEEEEeeeeeeCcCCCcC---------chHHHHHHHHHcCCCceEeCCCCceeeeEEHHHHHHHHHHHHhC
Confidence            65   4799999999999999975321         1233333333333444543  34578999999999999999976


Q ss_pred             CCCCCCeeEeccccccccc
Q 023205          266 PVFPPGIVDVHGILRYSQK  284 (286)
Q Consensus       266 ~~~~~~~~~l~~~~~~s~~  284 (286)
                      +. .+++||+++++.++++
T Consensus       234 ~~-~g~~~~v~~~~~~s~~  251 (336)
T 2hun_A          234 GE-SREIYNISAGEEKTNL  251 (336)
T ss_dssp             CC-TTCEEEECCSCEECHH
T ss_pred             CC-CCCEEEeCCCCcccHH
Confidence            54 4889999999888775

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=100.00  E-value=1.1e-33  Score=240.44  Aligned_cols=204  Identities=17%  Similarity=0.149  Sum_probs=165.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcC-CCEEEEccccCC-
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDG-VTAVISCVGGFG-  133 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~-~d~vi~~a~~~~-  133 (286)
                      +|+||||| +||||++++++|+++|++|++++|+.++.     ..+++++.+|+.|++.+.+++++ +|+|||+|+... 
T Consensus         3 ~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~-----~~~~~~~~~Dl~d~~~~~~~~~~~~d~vih~a~~~~~   76 (286)
T 3gpi_A            3 LSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQPM-----PAGVQTLIADVTRPDTLASIVHLRPEILVYCVAASEY   76 (286)
T ss_dssp             CCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSCC-----CTTCCEEECCTTCGGGCTTGGGGCCSEEEECHHHHHH
T ss_pred             CCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcccc-----ccCCceEEccCCChHHHHHhhcCCCCEEEEeCCCCCC
Confidence            46899999 59999999999999999999999987652     46899999999999999999998 999999998753 


Q ss_pred             CcchhhhhhhHHHHHHHHHHHHcCCCEEEEEecC-CcCCCC----------ccccchHHHHHHHHHHHHHhCCCcEEEEe
Q 023205          134 SNSYMYKINGTANINAIRAASEKGVKRFVYISAA-DFGVAN----------YLLQGYYEGKRAAETELLTRYPYGGVILR  202 (286)
Q Consensus       134 ~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~-~~~~~~----------~~~~~y~~sK~~~E~~~~~~~g~~~~ilR  202 (286)
                      ++...+++|+.++.+++++|++.++++|||+||. +|+...          .|.+.|+.+|..+|++ ++.  ++++++|
T Consensus        77 ~~~~~~~~n~~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~-~~~--~~~~ilR  153 (286)
T 3gpi_A           77 SDEHYRLSYVEGLRNTLSALEGAPLQHVFFVSSTGVYGQEVEEWLDEDTPPIAKDFSGKRMLEAEAL-LAA--YSSTILR  153 (286)
T ss_dssp             C-----CCSHHHHHHHHHHTTTSCCCEEEEEEEGGGCCCCCSSEECTTSCCCCCSHHHHHHHHHHHH-GGG--SSEEEEE
T ss_pred             CHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEcccEEEcCCCCCCCCCCCCCCCCChhhHHHHHHHHH-Hhc--CCeEEEe
Confidence            4456778999999999999999999999999994 455332          2467899999999998 654  9999999


Q ss_pred             eCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcCC--CCCCCeeEeccccc
Q 023205          203 PGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDP--VFPPGIVDVHGILR  280 (286)
Q Consensus       203 p~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~--~~~~~~~~l~~~~~  280 (286)
                      |+.+||+...           .+   +.....  ...+..++...+|++++|+|++++.+++++  ...+++||+++++.
T Consensus       154 ~~~v~G~~~~-----------~~---~~~~~~--~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (286)
T 3gpi_A          154 FSGIYGPGRL-----------RM---IRQAQT--PEQWPARNAWTNRIHRDDGAAFIAYLIQQRSHAVPERLYIVTDNQP  217 (286)
T ss_dssp             ECEEEBTTBC-----------HH---HHHTTC--GGGSCSSBCEECEEEHHHHHHHHHHHHHHHTTSCCCSEEEECCSCC
T ss_pred             cccccCCCch-----------hH---HHHHHh--cccCCCcCceeEEEEHHHHHHHHHHHHhhhccCCCCceEEEeCCCC
Confidence            9999998752           11   222222  223344566889999999999999999875  44589999999998


Q ss_pred             cccc
Q 023205          281 YSQK  284 (286)
Q Consensus       281 ~s~~  284 (286)
                      +++.
T Consensus       218 ~s~~  221 (286)
T 3gpi_A          218 LPVH  221 (286)
T ss_dssp             EEHH
T ss_pred             CCHH
Confidence            8875

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=100.00  E-value=1.5e-32  Score=238.29  Aligned_cols=214  Identities=21%  Similarity=0.232  Sum_probs=168.7

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCccccccc-CCceeEEeccCCCHhHHHHHhcC--CCEEEEcccc
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSW-ANNVIWHQGNLLSSDSWKEALDG--VTAVISCVGG  131 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~-~~~~~~i~~Dl~d~~~~~~~~~~--~d~vi~~a~~  131 (286)
                      .+|+||||||+||||++++++|+++|++|++++|+......... ..+++++.+|++|++.+.+++++  +|+|||+|+.
T Consensus        20 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~vih~A~~   99 (333)
T 2q1w_A           20 HMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKDHPNLTFVEGSIADHALVNQLIGDLQPDAVVHTAAS   99 (333)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCCCTTEEEEECCTTCHHHHHHHHHHHCCSEEEECCCC
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhhHhhcCCceEEEEeCCCHHHHHHHHhccCCcEEEECcee
Confidence            46799999999999999999999999999999998654221111 15889999999999999999988  9999999997


Q ss_pred             CCC----cchhhhhhhHHHHHHHHHHHHcCCCEEEEEecC-CcC----CCC-------ccc-cchHHHHHHHHHHHHH-h
Q 023205          132 FGS----NSYMYKINGTANINAIRAASEKGVKRFVYISAA-DFG----VAN-------YLL-QGYYEGKRAAETELLT-R  193 (286)
Q Consensus       132 ~~~----~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~-~~~----~~~-------~~~-~~y~~sK~~~E~~~~~-~  193 (286)
                      ...    ... +++|+.++.+++++|.+.++++|||+||. .|+    ...       .+. +.|+.+|..+|++++. .
T Consensus       100 ~~~~~~~~~~-~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~g~~~~~~~~~~~E~~~p~~~~Y~~sK~~~E~~~~~s~  178 (333)
T 2q1w_A          100 YKDPDDWYND-TLTNCVGGSNVVQAAKKNNVGRFVYFQTALCYGVKPIQQPVRLDHPRNPANSSYAISKSANEDYLEYSG  178 (333)
T ss_dssp             CSCTTCHHHH-HHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGCSCCCSSSBCTTSCCCCTTCHHHHHHHHHHHHHHHHT
T ss_pred             cCCCccCChH-HHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhCCCcccCCCCcCCCCCCCCCchHHHHHHHHHHHHhhh
Confidence            643    122 78999999999999999999999999994 455    321       345 7899999999998877 4


Q ss_pred             CCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcCCCCCCCee
Q 023205          194 YPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDPVFPPGIV  273 (286)
Q Consensus       194 ~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~  273 (286)
                      .  +++++||+.+|||...          ..+...+.........+.. ++...++++++|+|++++.+++++.  +++|
T Consensus       179 ~--~~~ilR~~~v~gp~~~----------~~~~~~~~~~~~~~~~~~~-~~~~~~~i~v~Dva~ai~~~~~~~~--g~~~  243 (333)
T 2q1w_A          179 L--DFVTFRLANVVGPRNV----------SGPLPIFFQRLSEGKKCFV-TKARRDFVFVKDLARATVRAVDGVG--HGAY  243 (333)
T ss_dssp             C--CEEEEEESEEESTTCC----------SSHHHHHHHHHHTTCCCEE-EECEECEEEHHHHHHHHHHHHTTCC--CEEE
T ss_pred             C--CeEEEeeceEECcCCc----------CcHHHHHHHHHHcCCeeeC-CCceEeeEEHHHHHHHHHHHHhcCC--CCEE
Confidence            4  8999999999999731          1122333322222222222 4557899999999999999998776  8899


Q ss_pred             Eeccccccccc
Q 023205          274 DVHGILRYSQK  284 (286)
Q Consensus       274 ~l~~~~~~s~~  284 (286)
                      |+++++.++++
T Consensus       244 ~v~~~~~~s~~  254 (333)
T 2q1w_A          244 HFSSGTDVAIK  254 (333)
T ss_dssp             ECSCSCCEEHH
T ss_pred             EeCCCCCccHH
Confidence            99999988875

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=100.00  E-value=8.1e-33  Score=241.18  Aligned_cols=230  Identities=23%  Similarity=0.219  Sum_probs=173.6

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCc------ccc---c---ccCCceeEEeccCCCHhHHHHHhc--
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRS------SLR---D---SWANNVIWHQGNLLSSDSWKEALD--  120 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~------~~~---~---~~~~~~~~i~~Dl~d~~~~~~~~~--  120 (286)
                      |+|+||||||+||||++++++|+++|++|++++|....      ...   .   ....+++++.+|++|++.+.++++  
T Consensus         1 M~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~   80 (348)
T 1ek6_A            1 MAEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKY   80 (348)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHHhc
Confidence            46799999999999999999999999999999986543      110   0   013578999999999999999998  


Q ss_pred             CCCEEEEccccCC------CcchhhhhhhHHHHHHHHHHHHcCCCEEEEEecC-CcCCC----------Ccc-ccchHHH
Q 023205          121 GVTAVISCVGGFG------SNSYMYKINGTANINAIRAASEKGVKRFVYISAA-DFGVA----------NYL-LQGYYEG  182 (286)
Q Consensus       121 ~~d~vi~~a~~~~------~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~-~~~~~----------~~~-~~~y~~s  182 (286)
                      ++|+|||+|+...      ++...+++|+.++.++++++++.++++|||+||. +|+..          ..+ .+.|+.+
T Consensus        81 ~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~E~~~~~p~~~~Y~~s  160 (348)
T 1ek6_A           81 SFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKS  160 (348)
T ss_dssp             CEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSSHHHHH
T ss_pred             CCCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhCCCCCCCcCCCCCCCCCCCchHHH
Confidence            8999999999753      3346778999999999999999999999999994 45532          123 6789999


Q ss_pred             HHHHHHHHHH---h-CCCcEEEEeeCeeecCCCCCccccC-ccccCchHHHHHHhcc-cCCCCCC--------CCCccCC
Q 023205          183 KRAAETELLT---R-YPYGGVILRPGFIYGTRTVGGMKLP-LGVIGSPMEMVLQHAK-PLSQLPL--------VGPLFTP  248 (286)
Q Consensus       183 K~~~E~~~~~---~-~g~~~~ilRp~~v~g~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~--------~g~~~~~  248 (286)
                      |..+|++++.   . .+++++++||+.+||+...+.+... ......++..+..... ....+++        .|+..++
T Consensus       161 K~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~  240 (348)
T 1ek6_A          161 KFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRD  240 (348)
T ss_dssp             HHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEEC
T ss_pred             HHHHHHHHHHHHhcCCCcceEEEeeccccCCCcccccCcCcccchhhHHHHHHHHHHhcCCCeEEeCCcccCCCCceEEe
Confidence            9999998865   2 2399999999999999643221110 0001234455544443 3333333        2455789


Q ss_pred             CccHHHHHHHHHHHhcCCC-CCC-CeeEeccccccccc
Q 023205          249 PVNVTVVAKVAVRAATDPV-FPP-GIVDVHGILRYSQK  284 (286)
Q Consensus       249 ~i~v~Dva~~~~~~l~~~~-~~~-~~~~l~~~~~~s~~  284 (286)
                      |++++|+|++++.+++++. ..+ ++||+++++.++++
T Consensus       241 ~i~v~Dva~a~~~~~~~~~~~~g~~~~ni~~~~~~s~~  278 (348)
T 1ek6_A          241 YIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVL  278 (348)
T ss_dssp             EEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCCEEHH
T ss_pred             eEEHHHHHHHHHHHHhcccccCCceEEEeCCCCCccHH
Confidence            9999999999999997652 334 89999999888875

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=100.00  E-value=2.3e-33  Score=238.39  Aligned_cols=198  Identities=17%  Similarity=0.222  Sum_probs=167.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhc--CCCEEEEccccCC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD--GVTAVISCVGGFG  133 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~--~~d~vi~~a~~~~  133 (286)
                      +|+|||||||||||++++++|+++|++|++++|.                ++|+.|.+.+.++++  ++|+|||+|+...
T Consensus         5 ~m~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~----------------~~D~~d~~~~~~~~~~~~~d~vi~~a~~~~   68 (287)
T 3sc6_A            5 KERVIITGANGQLGKQLQEELNPEEYDIYPFDKK----------------LLDITNISQVQQVVQEIRPHIIIHCAAYTK   68 (287)
T ss_dssp             CEEEEEESTTSHHHHHHHHHSCTTTEEEEEECTT----------------TSCTTCHHHHHHHHHHHCCSEEEECCCCCC
T ss_pred             eeEEEEECCCCHHHHHHHHHHHhCCCEEEEeccc----------------ccCCCCHHHHHHHHHhcCCCEEEECCcccC
Confidence            3499999999999999999999999999999993                479999999999998  6999999999764


Q ss_pred             ------CcchhhhhhhHHHHHHHHHHHHcCCCEEEEEecC-CcCCC----------CccccchHHHHHHHHHHHHHhCCC
Q 023205          134 ------SNSYMYKINGTANINAIRAASEKGVKRFVYISAA-DFGVA----------NYLLQGYYEGKRAAETELLTRYPY  196 (286)
Q Consensus       134 ------~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~-~~~~~----------~~~~~~y~~sK~~~E~~~~~~~g~  196 (286)
                            ++...+++|+.++.+++++|++.++ +|||+||. +|+..          ..|.+.|+.+|..+|++++. .+.
T Consensus        69 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~-~~~  146 (287)
T 3sc6_A           69 VDQAEKERDLAYVINAIGARNVAVASQLVGA-KLVYISTDYVFQGDRPEGYDEFHNPAPINIYGASKYAGEQFVKE-LHN  146 (287)
T ss_dssp             HHHHTTCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGSCCCCSSCBCTTSCCCCCSHHHHHHHHHHHHHHH-HCS
T ss_pred             hHHHhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEchhhhcCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH-hCC
Confidence                  4456789999999999999999998 79999994 45432          23467899999999998877 345


Q ss_pred             cEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcCCCCCCCeeEec
Q 023205          197 GGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDPVFPPGIVDVH  276 (286)
Q Consensus       197 ~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~l~  276 (286)
                      +++++||+.+|||...           .+...+.........++..++..+++++++|+|++++.+++++.  +++||++
T Consensus       147 ~~~ilR~~~v~G~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~--~~~~~i~  213 (287)
T 3sc6_A          147 KYFIVRTSWLYGKYGN-----------NFVKTMIRLGKEREEISVVADQIGSPTYVADLNVMINKLIHTSL--YGTYHVS  213 (287)
T ss_dssp             SEEEEEECSEECSSSC-----------CHHHHHHHHHTTCSEEEEECSCEECCEEHHHHHHHHHHHHTSCC--CEEEECC
T ss_pred             CcEEEeeeeecCCCCC-----------cHHHHHHHHHHcCCCeEeecCcccCceEHHHHHHHHHHHHhCCC--CCeEEEc
Confidence            8999999999998652           24455666666666777777888999999999999999999877  7799999


Q ss_pred             cccccccc
Q 023205          277 GILRYSQK  284 (286)
Q Consensus       277 ~~~~~s~~  284 (286)
                      +++.++++
T Consensus       214 ~~~~~s~~  221 (287)
T 3sc6_A          214 NTGSCSWF  221 (287)
T ss_dssp             CBSCEEHH
T ss_pred             CCCcccHH
Confidence            99988875

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=100.00  E-value=2.1e-32  Score=237.06  Aligned_cols=215  Identities=19%  Similarity=0.209  Sum_probs=169.5

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCccccc-ccCCceeEEeccCCCHhHHHHHhc--CCCEEEEcccc
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRD-SWANNVIWHQGNLLSSDSWKEALD--GVTAVISCVGG  131 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~-~~~~~~~~i~~Dl~d~~~~~~~~~--~~d~vi~~a~~  131 (286)
                      ..|+||||||+||||++++++|+++|++|++++|+....... ....+++++.+|++|.+++.++++  ++|+||||||.
T Consensus        19 ~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l~~v~~~~~Dl~d~~~~~~~~~~~~~D~vih~A~~   98 (330)
T 2pzm_A           19 SHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPVAGLSVIEGSVTDAGLLERAFDSFKPTHVVHSAAA   98 (330)
T ss_dssp             TCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSCTTEEEEECCTTCHHHHHHHHHHHCCSEEEECCCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhccCCceEEEeeCCCHHHHHHHHhhcCCCEEEECCcc
Confidence            357999999999999999999999999999999975442210 111578999999999999999999  99999999997


Q ss_pred             CCC----cchhhhhhhHHHHHHHHHHHHcCCCEEEEEecC-CcCCCC----c------cccchHHHHHHHHHHHHHhCCC
Q 023205          132 FGS----NSYMYKINGTANINAIRAASEKGVKRFVYISAA-DFGVAN----Y------LLQGYYEGKRAAETELLTRYPY  196 (286)
Q Consensus       132 ~~~----~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~-~~~~~~----~------~~~~y~~sK~~~E~~~~~~~g~  196 (286)
                      ...    ... +++|+.++.+++++|.+.++++|||+||. +|+...    .      +.+.|+.+|..+|++++.. ++
T Consensus        99 ~~~~~~~~~~-~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~~~~~~~~~~~~E~~~~~~~Y~~sK~~~e~~~~~~-~~  176 (330)
T 2pzm_A           99 YKDPDDWAED-AATNVQGSINVAKAASKAGVKRLLNFQTALCYGRPATVPIPIDSPTAPFTSYGISKTAGEAFLMMS-DV  176 (330)
T ss_dssp             CSCTTCHHHH-HHHHTHHHHHHHHHHHHHTCSEEEEEEEGGGGCSCSSSSBCTTCCCCCCSHHHHHHHHHHHHHHTC-SS
T ss_pred             CCCccccChh-HHHHHHHHHHHHHHHHHcCCCEEEEecCHHHhCCCccCCCCcCCCCCCCChHHHHHHHHHHHHHHc-CC
Confidence            643    123 78999999999999999999999999994 455432    1      5678999999999988774 99


Q ss_pred             cEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHH-HHHHHhcCCCCCCCeeEe
Q 023205          197 GGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAK-VAVRAATDPVFPPGIVDV  275 (286)
Q Consensus       197 ~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~-~~~~~l~~~~~~~~~~~l  275 (286)
                      +++++||+++|||+...          ..+..+.........+...++ ..++++++|+|+ +++.+++++.  +++||+
T Consensus       177 ~~~~iR~~~v~gp~~~~----------~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~Dva~~a~~~~~~~~~--g~~~~v  243 (330)
T 2pzm_A          177 PVVSLRLANVTGPRLAI----------GPIPTFYKRLKAGQKCFCSDT-VRDFLDMSDFLAIADLSLQEGRP--TGVFNV  243 (330)
T ss_dssp             CEEEEEECEEECTTCCS----------SHHHHHHHHHHTTCCCCEESC-EECEEEHHHHHHHHHHHTSTTCC--CEEEEE
T ss_pred             CEEEEeeeeeECcCCCC----------CHHHHHHHHHHcCCEEeCCCC-EecceeHHHHHHHHHHHHhhcCC--CCEEEe
Confidence            99999999999997521          122223222222222222234 789999999999 9999998765  899999


Q ss_pred             ccccccccc
Q 023205          276 HGILRYSQK  284 (286)
Q Consensus       276 ~~~~~~s~~  284 (286)
                      ++++.++++
T Consensus       244 ~~~~~~s~~  252 (330)
T 2pzm_A          244 STGEGHSIK  252 (330)
T ss_dssp             SCSCCEEHH
T ss_pred             CCCCCCCHH
Confidence            999888875

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=100.00  E-value=1e-32  Score=244.85  Aligned_cols=229  Identities=20%  Similarity=0.219  Sum_probs=171.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHH-HCCCeEEEEecCCCcc--------cccc-------c----CCc---eeEEeccCCCH
Q 023205           56 SEKLLVLGGNGFVGSHICREAL-DRGLTVASLSRSGRSS--------LRDS-------W----ANN---VIWHQGNLLSS  112 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll-~~g~~V~~l~R~~~~~--------~~~~-------~----~~~---~~~i~~Dl~d~  112 (286)
                      .|+||||||+||||++++++|+ ++|++|++++|+....        ....       .    ..+   ++++.+|++|+
T Consensus         2 ~m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~   81 (397)
T 1gy8_A            2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE   81 (397)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCH
Confidence            3589999999999999999999 9999999999976542        1110       0    124   89999999999


Q ss_pred             hHHHHHhc--C-CCEEEEccccCC------CcchhhhhhhHHHHHHHHHHHHcCCCEEEEEecC-CcCCCC---------
Q 023205          113 DSWKEALD--G-VTAVISCVGGFG------SNSYMYKINGTANINAIRAASEKGVKRFVYISAA-DFGVAN---------  173 (286)
Q Consensus       113 ~~~~~~~~--~-~d~vi~~a~~~~------~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~-~~~~~~---------  173 (286)
                      +.+.++++  + +|+|||+|+...      +....+++|+.++.+++++|++.++++|||+||. +|+...         
T Consensus        82 ~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~  161 (397)
T 1gy8_A           82 DFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNAE  161 (397)
T ss_dssp             HHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTBSCCC-----CCC
T ss_pred             HHHHHHHHhcCCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHhCCCEEEEECCHHHhCCCCccccccccc
Confidence            99999997  6 999999999764      2346788999999999999999999999999994 454332         


Q ss_pred             --------ccccchHHHHHHHHHHHHH---hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHH-----HhcccC-
Q 023205          174 --------YLLQGYYEGKRAAETELLT---RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVL-----QHAKPL-  236 (286)
Q Consensus       174 --------~~~~~y~~sK~~~E~~~~~---~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~-  236 (286)
                              .+.+.|+.+|..+|++++.   ..|++++++||+.+||+...+.+.........++..+.     ...... 
T Consensus       162 ~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (397)
T 1gy8_A          162 PIDINAKKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAPDQR  241 (397)
T ss_dssp             CBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHHHSCC--
T ss_pred             CcCccCCCCCCCchHHHHHHHHHHHHHHHHHHCCcEEEEeccceeCCCccccccccccchhHHHHHHHHHHHHHHHhcCc
Confidence                    2357899999999998865   35899999999999999753221110001123444444     333222 


Q ss_pred             ----------CCCCC--------CCCccCCCccHHHHHHHHHHHhcCCCCC-----C---CeeEeccccccccc
Q 023205          237 ----------SQLPL--------VGPLFTPPVNVTVVAKVAVRAATDPVFP-----P---GIVDVHGILRYSQK  284 (286)
Q Consensus       237 ----------~~~~~--------~g~~~~~~i~v~Dva~~~~~~l~~~~~~-----~---~~~~l~~~~~~s~~  284 (286)
                                ..+++        .|+..++|||++|+|++++.+++.+...     +   ++||+++++.++++
T Consensus       242 ~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a~~~~l~~~~~~~~~~~~~~~~~~ni~~~~~~s~~  315 (397)
T 1gy8_A          242 LTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTSRGYSVR  315 (397)
T ss_dssp             ---------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCSCCEEHH
T ss_pred             cccccccccCCCceeecCcccCCCCCeeEeeEeHHHHHHHHHHHHhcccccccccccCCCcEEEeCCCCcccHH
Confidence                      13333        2355789999999999999999764322     3   79999999888875

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=100.00  E-value=1.2e-32  Score=239.70  Aligned_cols=226  Identities=15%  Similarity=0.129  Sum_probs=170.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHC-CCeEEEEecCCCcccccccCCceeEEeccCCC-HhHHHHHhcCCCEEEEccccCC-
Q 023205           57 EKLLVLGGNGFVGSHICREALDR-GLTVASLSRSGRSSLRDSWANNVIWHQGNLLS-SDSWKEALDGVTAVISCVGGFG-  133 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~-g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d-~~~~~~~~~~~d~vi~~a~~~~-  133 (286)
                      |+|||||||||||++++++|+++ |++|++++|+..+........+++++.+|++| .+.+.++++++|+|||+|+... 
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~d~vih~A~~~~~   80 (345)
T 2bll_A            1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIATP   80 (345)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHHHHCSEEEECBCCCCH
T ss_pred             CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhhcCCCeEEEeccccCcHHHHHhhccCCCEEEEcccccCc
Confidence            58999999999999999999998 89999999987653222224589999999998 4678889999999999998754 


Q ss_pred             -----CcchhhhhhhHHHHHHHHHHHHcCCCEEEEEecC-CcCCCC-----------------ccccchHHHHHHHHHHH
Q 023205          134 -----SNSYMYKINGTANINAIRAASEKGVKRFVYISAA-DFGVAN-----------------YLLQGYYEGKRAAETEL  190 (286)
Q Consensus       134 -----~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~-~~~~~~-----------------~~~~~y~~sK~~~E~~~  190 (286)
                           +....+++|+.++.+++++|++.+ ++|||+||. +|+...                 .+.+.|+.+|..+|+++
T Consensus        81 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~v~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~e~~~  159 (345)
T 2bll_A           81 IEYTRNPLRVFELDFEENLRIIRYCVKYR-KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVI  159 (345)
T ss_dssp             HHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CEEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGGHHHHHHHHHHHHH
T ss_pred             cchhcCHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEecHHHcCCCCCCCcCCcccccccCcccCcccccHHHHHHHHHHH
Confidence                 234567899999999999999988 899999994 444321                 12347999999999988


Q ss_pred             HH---hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCC--CCCccCCCccHHHHHHHHHHHhcC
Q 023205          191 LT---RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPL--VGPLFTPPVNVTVVAKVAVRAATD  265 (286)
Q Consensus       191 ~~---~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~~~~i~v~Dva~~~~~~l~~  265 (286)
                      +.   ..|++++++||+.+||+....... +.......+..+........++..  .++..+++++++|+|++++.++++
T Consensus       160 ~~~~~~~~~~~~ilrp~~v~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~  238 (345)
T 2bll_A          160 WAYGEKEGLQFTLFRPFNWMGPRLDNLNA-ARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIEN  238 (345)
T ss_dssp             HHHHHHHCCCEEEEEECSEECSSCCCTTC-SBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHHHHHHHHHHC
T ss_pred             HHHHHhcCCCEEEEcCCcccCCCcccccc-cccccccHHHHHHHHHHcCCCcEEECCCCEEEEEEEHHHHHHHHHHHHhh
Confidence            64   468999999999999997642110 000001122333333333333333  345678999999999999999987


Q ss_pred             CC--CCCCeeEecccc-ccccc
Q 023205          266 PV--FPPGIVDVHGIL-RYSQK  284 (286)
Q Consensus       266 ~~--~~~~~~~l~~~~-~~s~~  284 (286)
                      +.  ..+++||+++++ .+|++
T Consensus       239 ~~~~~~g~~~~i~~~~~~~s~~  260 (345)
T 2bll_A          239 AGNRCDGEIINIGNPENEASIE  260 (345)
T ss_dssp             GGGTTTTEEEEECCTTSEEEHH
T ss_pred             ccccCCCceEEeCCCCCCCCHH
Confidence            64  457899999986 78775

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=100.00  E-value=1.1e-33  Score=258.84  Aligned_cols=272  Identities=16%  Similarity=0.179  Sum_probs=179.8

Q ss_pred             HHhhcCCCcchhhhhhhhcCCcccCCCCCccCCccc----cccc---cCCCCCCCCCCeEEEEcCCChhHHHHHHHHHHC
Q 023205            7 RLINSRSSVSRLSAITASGNGRYLSTDSNKVDEPLK----VEEA---ETVNVPPPPSEKLLVLGGNGFVGSHICREALDR   79 (286)
Q Consensus         7 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~----~~~~---~~~~~~~~~~~~VlVtGatG~iG~~l~~~Ll~~   79 (286)
                      ..++.+||+..|+..+........... ... ....    ....   .........+|+|||||||||||++++++|++.
T Consensus        96 ~~~~~~~t~~~la~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~VLVTGatG~iG~~l~~~L~~~  173 (508)
T 4f6l_B           96 QTLYQYKTVRQIVNYMYQNQQSLVALP-DNL-SELQKIVMSRYNLGILEDSLSHRPLGNTLLTGATGFLGAYLIEALQGY  173 (508)
T ss_dssp             -----------------------CCCC-STH-HHHHHHHHHHHTTCCCSTTSCBCCCEEEEESCTTSHHHHHHHHHTBTT
T ss_pred             HHHhcCCcHHHHHHHHHhhccccccch-hhh-HHHHHHhhhcccccccccccccCCCCeEEEECCccchHHHHHHHHHhc
Confidence            447889999999988754432110000 000 0000    0000   011122234679999999999999999999988


Q ss_pred             CCeEEEEecCCCccc-----------------ccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccccCC---Ccchhh
Q 023205           80 GLTVASLSRSGRSSL-----------------RDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFG---SNSYMY  139 (286)
Q Consensus        80 g~~V~~l~R~~~~~~-----------------~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~~~---~~~~~~  139 (286)
                      |++|++++|+..+..                 ......+++++.+|+.|++.+. ++.++|+|||||+..+   +....+
T Consensus       174 g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~-~~~~~D~Vih~Aa~~~~~~~~~~~~  252 (508)
T 4f6l_B          174 SHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV-LPENMDTIIHAGARTDHFGDDDEFE  252 (508)
T ss_dssp             EEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC-CSSCCSEEEECCCC--------CCH
T ss_pred             CCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC-CccCCCEEEECCceecCCCCHHHHh
Confidence            999999999977310                 1122468999999999987777 7789999999999864   345677


Q ss_pred             hhhhHHHHHHHHHHHHcCCCEEEEEecCCcCCC------------------CccccchHHHHHHHHHHHHH--hCCCcEE
Q 023205          140 KINGTANINAIRAASEKGVKRFVYISAADFGVA------------------NYLLQGYYEGKRAAETELLT--RYPYGGV  199 (286)
Q Consensus       140 ~~~~~~~~~l~~~a~~~~v~~~v~~Ss~~~~~~------------------~~~~~~y~~sK~~~E~~~~~--~~g~~~~  199 (286)
                      ++|+.++.+++++|++ +.++|||+||...|..                  ..+.++|+++|+.+|+++++  ..|++++
T Consensus       253 ~~Nv~gt~~ll~~a~~-~~~~~v~iSS~~vG~~~~~~~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~gi~~~  331 (508)
T 4f6l_B          253 KVNVQGTVDVIRLAQQ-HHARLIYVSTISVGTYFDIDTEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVNNGLDGR  331 (508)
T ss_dssp             HHHHHHHHHHHHHHHT-TTCEEEEEEESCTTSEECTTCSCCEECTTCSCSSBCCCSHHHHHHHHHHHHHHHHHHTTCEEE
T ss_pred             hhHHHHHHHHHHHHHh-CCCcEEEeCChhhccCCccCCcCcccccccccccccCCCcHHHHHHHHHHHHHHHHHcCCCEE
Confidence            8999999999999998 7789999999543221                  12568899999999998876  4799999


Q ss_pred             EEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCC-CCccCCCccHHHHHHHHHHHhcCCCCCCCeeEeccc
Q 023205          200 ILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLV-GPLFTPPVNVTVVAKVAVRAATDPVFPPGIVDVHGI  278 (286)
Q Consensus       200 ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~l~~~  278 (286)
                      ++||+.+||+...+.+..  ......+..+.......+.++.. ++..++|++++|+|++++.++..+. .+++||++++
T Consensus       332 ilRp~~v~G~~~~~~~~~--~~~~~~~~~~i~~~~~~~~~~~~~g~~~~~~v~v~DvA~ai~~~~~~~~-~~~~~nl~~~  408 (508)
T 4f6l_B          332 IVRVGNLTSPYNGRWHMR--NIKTNRFSMVMNDLLQLDCIGVSMAEMPVDFSFVDTTARQIVALAQVNT-PQIIYHVLSP  408 (508)
T ss_dssp             EEEECCEESCSSSCCCCT--TCTTCHHHHHHHHHTTCSEEETTGGGSEEECEEHHHHHHHHHHHTTBCC-SCSEEEESCS
T ss_pred             EEecceeccCCCCCcccC--CcchHHHHHHHHHHHHcCCCCCCccCceEEEEcHHHHHHHHHHHHhCCC-CCCEEEeCCC
Confidence            999999999986543211  11122344455555555666643 4678899999999999999998877 6999999999


Q ss_pred             ccccccC
Q 023205          279 LRYSQKS  285 (286)
Q Consensus       279 ~~~s~~~  285 (286)
                      +.++|..
T Consensus       409 ~~~s~~e  415 (508)
T 4f6l_B          409 NKMPVKS  415 (508)
T ss_dssp             CEEEHHH
T ss_pred             CCCCHHH
Confidence            9999863

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=100.00  E-value=1.4e-32  Score=240.61  Aligned_cols=221  Identities=15%  Similarity=0.050  Sum_probs=171.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccc----cCCceeEEeccCCCHhHHHHHhcC--CCEEEEcc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDS----WANNVIWHQGNLLSSDSWKEALDG--VTAVISCV  129 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~----~~~~~~~i~~Dl~d~~~~~~~~~~--~d~vi~~a  129 (286)
                      +|+||||||+||||++++++|+++|++|++++|+..+.....    ...+++++.+|+.|++.+.+++++  +|+|||+|
T Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A   88 (357)
T 1rkx_A            9 GKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREFQPEIVFHMA   88 (357)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhccCCceEEEEccccCHHHHHHHHHhcCCCEEEECC
Confidence            478999999999999999999999999999999875532110    135789999999999999999987  89999999


Q ss_pred             ccCC------CcchhhhhhhHHHHHHHHHHHHcC-CCEEEEEecC-CcCCC-----------CccccchHHHHHHHHHHH
Q 023205          130 GGFG------SNSYMYKINGTANINAIRAASEKG-VKRFVYISAA-DFGVA-----------NYLLQGYYEGKRAAETEL  190 (286)
Q Consensus       130 ~~~~------~~~~~~~~~~~~~~~l~~~a~~~~-v~~~v~~Ss~-~~~~~-----------~~~~~~y~~sK~~~E~~~  190 (286)
                      +...      .....+++|+.++.+++++|++.+ +++|||+||. +|+..           ..+.+.|+.+|..+|+++
T Consensus        89 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~  168 (357)
T 1rkx_A           89 AQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRENEAMGGYDPYSNSKGCAELVT  168 (357)
T ss_dssp             SCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTTSCBCCSSHHHHHHHHHHHHH
T ss_pred             CCcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecCHHHhCCCCcCCCCCCCCCCCCCCccHHHHHHHHHHH
Confidence            8532      334677899999999999999886 8999999994 45432           124578999999999988


Q ss_pred             HHh------------CCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCC-CCccCCCccHHHHHH
Q 023205          191 LTR------------YPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLV-GPLFTPPVNVTVVAK  257 (286)
Q Consensus       191 ~~~------------~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~i~v~Dva~  257 (286)
                      +..            .|++++++||+.+|||.....        ..++..+.........+.+. ++..++|++++|+|+
T Consensus       169 ~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~~--------~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~v~Dva~  240 (357)
T 1rkx_A          169 SSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWAL--------DRIVPDILRAFEQSQPVIIRNPHAIRPWQHVLEPLS  240 (357)
T ss_dssp             HHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCS--------SCHHHHHHHHHHTTCCEECSCTTCEECCEETHHHHH
T ss_pred             HHHHHHHhhhhccccCCceEEEEeeceeeCCCCCcc--------ccHHHHHHHHHhcCCCEEECCCCCeeccEeHHHHHH
Confidence            651            289999999999999875321        12444444444444444433 455789999999999


Q ss_pred             HHHHHhcC----CCCCCCeeEecc--ccccccc
Q 023205          258 VAVRAATD----PVFPPGIVDVHG--ILRYSQK  284 (286)
Q Consensus       258 ~~~~~l~~----~~~~~~~~~l~~--~~~~s~~  284 (286)
                      +++.+++.    +...+++||+++  ++.++++
T Consensus       241 a~~~~~~~~~~~~~~~~~~~ni~~~~~~~~s~~  273 (357)
T 1rkx_A          241 GYLLLAQKLYTDGAEYAEGWNFGPNDADATPVK  273 (357)
T ss_dssp             HHHHHHHHHHHTCGGGCSEEECCCCGGGCEEHH
T ss_pred             HHHHHHHhhhhcCCCCCceEEECCCCCCcccHH
Confidence            99999874    234478999987  4677764

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=100.00  E-value=4.2e-33  Score=227.67  Aligned_cols=206  Identities=15%  Similarity=0.116  Sum_probs=149.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccccCCCcc
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFGSNS  136 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~~~~~~  136 (286)
                      |+||||||||+||++++++|+++|++|++++|++++....  .++++++.+|++|++.  +.+.++|+|||+||....  
T Consensus         1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~--~~~~~~~~~D~~d~~~--~~~~~~d~vi~~ag~~~~--   74 (221)
T 3ew7_A            1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQT--HKDINILQKDIFDLTL--SDLSDQNVVVDAYGISPD--   74 (221)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHH--CSSSEEEECCGGGCCH--HHHTTCSEEEECCCSSTT--
T ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhc--cCCCeEEeccccChhh--hhhcCCCEEEECCcCCcc--
Confidence            5899999999999999999999999999999987653221  1689999999999887  788999999999998533  


Q ss_pred             hhhhhhhHHHHHHHHHHHHcCCCEEEEEecCC--cCCC----------CccccchHHHHHHHHHH--HHH-hCCCcEEEE
Q 023205          137 YMYKINGTANINAIRAASEKGVKRFVYISAAD--FGVA----------NYLLQGYYEGKRAAETE--LLT-RYPYGGVIL  201 (286)
Q Consensus       137 ~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~~--~~~~----------~~~~~~y~~sK~~~E~~--~~~-~~g~~~~il  201 (286)
                       ....++.++.++++++++.++++||++||..  ++..          ..+...|+.+|...|.+  +.+ ..|++++++
T Consensus        75 -~~~~~~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~~k~~~e~~~~~~~~~~gi~~~iv  153 (221)
T 3ew7_A           75 -EAEKHVTSLDHLISVLNGTVSPRLLVVGGAASLQIDEDGNTLLESKGLREAPYYPTARAQAKQLEHLKSHQAEFSWTYI  153 (221)
T ss_dssp             -TTTSHHHHHHHHHHHHCSCCSSEEEEECCCC-------------------CCCSCCHHHHHHHHHHHHTTTTTSCEEEE
T ss_pred             -ccchHHHHHHHHHHHHHhcCCceEEEEecceEEEcCCCCccccccCCCCCHHHHHHHHHHHHHHHHHHhhccCccEEEE
Confidence             3567899999999999999899999999952  2222          12456799999999986  444 689999999


Q ss_pred             eeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcCCCCCCCeeEecccccc
Q 023205          202 RPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDPVFPPGIVDVHGILRY  281 (286)
Q Consensus       202 Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~l~~~~~~  281 (286)
                      ||+.+||+......             +   ......+...+++ .++++++|+|++++.+++++...++.|++.+|.+.
T Consensus       154 rp~~v~g~~~~~~~-------------~---~~~~~~~~~~~~~-~~~i~~~Dva~~~~~~l~~~~~~g~~~~~~~~~~~  216 (221)
T 3ew7_A          154 SPSAMFEPGERTGD-------------Y---QIGKDHLLFGSDG-NSFISMEDYAIAVLDEIERPNHLNEHFTVAGKLEH  216 (221)
T ss_dssp             ECSSCCCCC--------------------------------------CCCHHHHHHHHHHHHHSCSCTTSEEECCC----
T ss_pred             eCcceecCCCccCc-------------e---EeccccceecCCC-CceEeHHHHHHHHHHHHhCccccCCEEEECCCCcc
Confidence            99999998431110             0   0011122222222 36899999999999999999988999999999999


Q ss_pred             cccCC
Q 023205          282 SQKSR  286 (286)
Q Consensus       282 s~~~~  286 (286)
                      +++.+
T Consensus       217 ~~~~~  221 (221)
T 3ew7_A          217 HHHHH  221 (221)
T ss_dssp             -----
T ss_pred             ccccC
Confidence            98764

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=100.00  E-value=3.5e-33  Score=239.82  Aligned_cols=222  Identities=13%  Similarity=0.119  Sum_probs=170.4

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHC--CCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhc--CCCEEEEccc
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDR--GLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD--GVTAVISCVG  130 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~--g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~--~~d~vi~~a~  130 (286)
                      |+|+|||||||||||++++++|+++  |++|++++|+..+..   ...+++++.+|+.|.+.+.++++  ++|+|||+|+
T Consensus         1 M~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~---~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vih~a~   77 (312)
T 2yy7_A            1 MNPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTD---VVNSGPFEVVNALDFNQIEHLVEVHKITDIYLMAA   77 (312)
T ss_dssp             CCCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCH---HHHSSCEEECCTTCHHHHHHHHHHTTCCEEEECCC
T ss_pred             CCceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccc---ccCCCceEEecCCCHHHHHHHHhhcCCCEEEECCc
Confidence            3578999999999999999999999  899999999865521   12367899999999999999998  8999999998


Q ss_pred             cCC-----CcchhhhhhhHHHHHHHHHHHHcCCCEEEEEecC-CcCCCC-----------ccccchHHHHHHHHHHHHH-
Q 023205          131 GFG-----SNSYMYKINGTANINAIRAASEKGVKRFVYISAA-DFGVAN-----------YLLQGYYEGKRAAETELLT-  192 (286)
Q Consensus       131 ~~~-----~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~-~~~~~~-----------~~~~~y~~sK~~~E~~~~~-  192 (286)
                      ...     +....+++|+.++.+++++|++.++++|||+||. +|+...           .+.+.|+.+|..+|++++. 
T Consensus        78 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~  157 (312)
T 2yy7_A           78 LLSATAEKNPAFAWDLNMNSLFHVLNLAKAKKIKKIFWPSSIAVFGPTTPKENTPQYTIMEPSTVYGISKQAGERWCEYY  157 (312)
T ss_dssp             CCHHHHHHCHHHHHHHHHHHHHHHHHHHHTTSCSEEECCEEGGGCCTTSCSSSBCSSCBCCCCSHHHHHHHHHHHHHHHH
T ss_pred             cCCCchhhChHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHHhCCCCCCCCccccCcCCCCchhHHHHHHHHHHHHHH
Confidence            753     3346778999999999999999999999999994 454321           2467899999999998764 


Q ss_pred             --hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCC-CCCCCCCccCCCccHHHHHHHHHHHhcCCCC-
Q 023205          193 --RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLS-QLPLVGPLFTPPVNVTVVAKVAVRAATDPVF-  268 (286)
Q Consensus       193 --~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~i~v~Dva~~~~~~l~~~~~-  268 (286)
                        ..|++++++||+.+||+...+.....    ......+........ .+...++..++|++++|+|++++.+++++.. 
T Consensus       158 ~~~~~~~~~~lrp~~v~g~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~  233 (312)
T 2yy7_A          158 HNIYGVDVRSIRYPGLISWSTPPGGGTT----DYAVDIFYKAIADKKYECFLSSETKMPMMYMDDAIDATINIMKAPVEK  233 (312)
T ss_dssp             HHHHCCEEECEEECEEECSSSCCCSCTT----THHHHHHHHHHHTSEEEESSCTTCCEEEEEHHHHHHHHHHHHHSCGGG
T ss_pred             HHhcCCcEEEEeCCeEecCCCCCCCchh----hhHHHHHHHHHcCCCeEEecCCCceeeeeeHHHHHHHHHHHHhCcccc
Confidence              45899999999999997643221000    112333333332222 1223355688999999999999999987653 


Q ss_pred             --CCCeeEeccccccccc
Q 023205          269 --PPGIVDVHGILRYSQK  284 (286)
Q Consensus       269 --~~~~~~l~~~~~~s~~  284 (286)
                        .+++||+++ +.+|++
T Consensus       234 ~~~~~~~ni~~-~~~s~~  250 (312)
T 2yy7_A          234 IKIHSSYNLAA-MSFTPT  250 (312)
T ss_dssp             CCCSSCEECCS-EEECHH
T ss_pred             cccCceEEeCC-CccCHH
Confidence              248999997 777764

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=100.00  E-value=2.2e-32  Score=237.27  Aligned_cols=223  Identities=12%  Similarity=-0.014  Sum_probs=169.9

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc----cc-cCCceeEEeccCCCHhHHHHHhcC--CCEEE
Q 023205           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR----DS-WANNVIWHQGNLLSSDSWKEALDG--VTAVI  126 (286)
Q Consensus        54 ~~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~----~~-~~~~~~~i~~Dl~d~~~~~~~~~~--~d~vi  126 (286)
                      .++++||||||+||||++++++|+++|++|++++|+..+...    .. ...+++++.+|++|.+++.+++++  +|+||
T Consensus        12 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vi   91 (335)
T 1rpn_A           12 SMTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQEVY   91 (335)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred             ccCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhccccCceEEEECCCCCHHHHHHHHHHcCCCEEE
Confidence            457899999999999999999999999999999998754211    11 134789999999999999999986  69999


Q ss_pred             EccccCC------CcchhhhhhhHHHHHHHHHHHHcCC-CEEEEEecC-CcCCCC----------ccccchHHHHHHHHH
Q 023205          127 SCVGGFG------SNSYMYKINGTANINAIRAASEKGV-KRFVYISAA-DFGVAN----------YLLQGYYEGKRAAET  188 (286)
Q Consensus       127 ~~a~~~~------~~~~~~~~~~~~~~~l~~~a~~~~v-~~~v~~Ss~-~~~~~~----------~~~~~y~~sK~~~E~  188 (286)
                      |+|+...      +....+++|+.++.+++++|++.++ ++|||+||. +|+...          .+.+.|+.+|..+|.
T Consensus        92 h~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~sK~~~e~  171 (335)
T 1rpn_A           92 NLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQDENTPFYPRSPYGVAKLYGHW  171 (335)
T ss_dssp             ECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHH
T ss_pred             ECccccchhhhhhChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCHHHhCCCCCCCCCcccCCCCCChhHHHHHHHHH
Confidence            9999753      3346778999999999999999986 899999994 454322          235689999999999


Q ss_pred             HHHH---hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHH-HhcccCCCC-C-CCCCccCCCccHHHHHHHHHHH
Q 023205          189 ELLT---RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVL-QHAKPLSQL-P-LVGPLFTPPVNVTVVAKVAVRA  262 (286)
Q Consensus       189 ~~~~---~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~-~~g~~~~~~i~v~Dva~~~~~~  262 (286)
                      +++.   ..+++++++||+.+|||......      ....+..+. ......... . ..++..++|++++|+|++++.+
T Consensus       172 ~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~~------~~~~~~~~~~~~~~g~~~~~~~g~g~~~~~~i~v~Dva~a~~~~  245 (335)
T 1rpn_A          172 ITVNYRESFGLHASSGILFNHESPLRGIEF------VTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLM  245 (335)
T ss_dssp             HHHHHHHHHCCCEEEEEECCEECTTSCTTS------HHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHHHHH
T ss_pred             HHHHHHHHcCCcEEEEeeCcccCCCCCCCc------chHHHHHHHHHHHcCCCceEEeCCCcceeceEEHHHHHHHHHHH
Confidence            8865   35899999999999999754221      001122222 222222222 2 2345678999999999999999


Q ss_pred             hcCCCCCCCeeEeccccccccc
Q 023205          263 ATDPVFPPGIVDVHGILRYSQK  284 (286)
Q Consensus       263 l~~~~~~~~~~~l~~~~~~s~~  284 (286)
                      ++++.  +++||+++++.++++
T Consensus       246 ~~~~~--~~~~ni~~~~~~s~~  265 (335)
T 1rpn_A          246 LQQDK--ADDYVVATGVTTTVR  265 (335)
T ss_dssp             HHSSS--CCCEEECCSCEEEHH
T ss_pred             HhcCC--CCEEEEeCCCCccHH
Confidence            98765  589999999988875

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=100.00  E-value=2e-32  Score=235.17  Aligned_cols=218  Identities=23%  Similarity=0.246  Sum_probs=169.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhc--CCCEEEEccccCC-
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD--GVTAVISCVGGFG-  133 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~--~~d~vi~~a~~~~-  133 (286)
                      |+||||||+||||++++++|+++|++|++++|....... ....+++++.+|++|++++.++++  ++|+|||+|+... 
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~a~~~~~   79 (311)
T 2p5y_A            1 MRVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRE-NVPKGVPFFRVDLRDKEGVERAFREFRPTHVSHQAAQASV   79 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCGG-GSCTTCCEECCCTTCHHHHHHHHHHHCCSEEEECCSCCCH
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCchh-hcccCeEEEECCCCCHHHHHHHHHhcCCCEEEECccccCc
Confidence            479999999999999999999999999999986433221 122578899999999999999998  8999999998753 


Q ss_pred             -----CcchhhhhhhHHHHHHHHHHHHcCCCEEEEEecC--CcCC-C----------CccccchHHHHHHHHHHHHH---
Q 023205          134 -----SNSYMYKINGTANINAIRAASEKGVKRFVYISAA--DFGV-A----------NYLLQGYYEGKRAAETELLT---  192 (286)
Q Consensus       134 -----~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~--~~~~-~----------~~~~~~y~~sK~~~E~~~~~---  192 (286)
                           ++...+++|+.++.+++++|++.++++||++||.  .|+. .          ..+.+.|+.+|..+|++++.   
T Consensus        80 ~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~~g~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~  159 (311)
T 2p5y_A           80 KVSVEDPVLDFEVNLLGGLNLLEACRQYGVEKLVFASTGGAIYGEVPEGERAEETWPPRPKSPYAASKAAFEHYLSVYGQ  159 (311)
T ss_dssp             HHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEHHHHHCCCCTTCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHH
T ss_pred             hhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCChhhcCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHHHHH
Confidence                 2346778999999999999999999999999995  3443 1          12457899999999998864   


Q ss_pred             hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCC-------CCCCccCCCccHHHHHHHHHHHhcC
Q 023205          193 RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLP-------LVGPLFTPPVNVTVVAKVAVRAATD  265 (286)
Q Consensus       193 ~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~g~~~~~~i~v~Dva~~~~~~l~~  265 (286)
                      ..|++++++||+.+|||.......      ..++..+........++.       ..++...+|++++|+|++++.++++
T Consensus       160 ~~~~~~~~lrp~~v~Gp~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~  233 (311)
T 2p5y_A          160 SYGLKWVSLRYGNVYGPRQDPHGE------AGVVAIFAERVLKGLPVTLYARKTPGDEGCVRDYVYVGDVAEAHALALFS  233 (311)
T ss_dssp             HHCCCEEEEEECEEECTTCCSSST------THHHHHHHHHHHHTCCEEEECSSSTTSCCCEECEEEHHHHHHHHHHHHHH
T ss_pred             HcCCCEEEEeeccccCcCCCCCCc------CcHHHHHHHHHHcCCCcEEEecccCCCCCeEEeeEEHHHHHHHHHHHHhC
Confidence            468999999999999997643210      112333333222223332       2334578999999999999999976


Q ss_pred             CCCCCCeeEeccccccccc
Q 023205          266 PVFPPGIVDVHGILRYSQK  284 (286)
Q Consensus       266 ~~~~~~~~~l~~~~~~s~~  284 (286)
                      +   +++||+++++.+|++
T Consensus       234 ~---~~~~~i~~~~~~s~~  249 (311)
T 2p5y_A          234 L---EGIYNVGTGEGHTTR  249 (311)
T ss_dssp             C---CEEEEESCSCCEEHH
T ss_pred             C---CCEEEeCCCCCccHH
Confidence            4   789999999988875

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=100.00  E-value=1.1e-32  Score=245.14  Aligned_cols=229  Identities=15%  Similarity=0.178  Sum_probs=170.5

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCccc-------------------c---cccCCceeEEeccCCCH
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSL-------------------R---DSWANNVIWHQGNLLSS  112 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~-------------------~---~~~~~~~~~i~~Dl~d~  112 (286)
                      .+++|||||||||||++++++|+++|++|++++|......                   .   .....+++++.+|++|+
T Consensus        10 ~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~Dl~d~   89 (404)
T 1i24_A           10 HGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDF   89 (404)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSH
T ss_pred             CCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECCCCCH
Confidence            3679999999999999999999999999999998642210                   0   01135789999999999


Q ss_pred             hHHHHHhcC--CCEEEEccccCCC------cc---hhhhhhhHHHHHHHHHHHHcCC-CEEEEEecC-CcCCC-------
Q 023205          113 DSWKEALDG--VTAVISCVGGFGS------NS---YMYKINGTANINAIRAASEKGV-KRFVYISAA-DFGVA-------  172 (286)
Q Consensus       113 ~~~~~~~~~--~d~vi~~a~~~~~------~~---~~~~~~~~~~~~l~~~a~~~~v-~~~v~~Ss~-~~~~~-------  172 (286)
                      +.+.+++++  +|+|||+||....      +.   ..+++|+.++.+++++|++.++ ++|||+||. +|+..       
T Consensus        90 ~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~~~V~~SS~~vyg~~~~~~~E~  169 (404)
T 1i24_A           90 EFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPNIDIEEG  169 (404)
T ss_dssp             HHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCCSSCBCSS
T ss_pred             HHHHHHHhccCCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHhCCCcEEEEeCcHHHhCCCCCCCCcc
Confidence            999999988  9999999997532      11   2568999999999999999887 599999995 45532       


Q ss_pred             ----------------CccccchHHHHHHHHHHHHH---hCCCcEEEEeeCeeecCCCCCcccc--------CccccCch
Q 023205          173 ----------------NYLLQGYYEGKRAAETELLT---RYPYGGVILRPGFIYGTRTVGGMKL--------PLGVIGSP  225 (286)
Q Consensus       173 ----------------~~~~~~y~~sK~~~E~~~~~---~~g~~~~ilRp~~v~g~~~~~~~~~--------~~~~~~~~  225 (286)
                                      ..+.+.|+.+|..+|++++.   ..|++++++||+.+|||........        +.+.....
T Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ivrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~  249 (404)
T 1i24_A          170 YITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGTA  249 (404)
T ss_dssp             EEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCSTTTCCH
T ss_pred             ccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhcCCeEEEEecceeeCCCCCccccccccccccccccchhhH
Confidence                            22456899999999998764   3589999999999999976421100        00000123


Q ss_pred             HHHHHHhcccCCCCCCC--CCccCCCccHHHHHHHHHHHhcCCCCCC--CeeEeccccccccc
Q 023205          226 MEMVLQHAKPLSQLPLV--GPLFTPPVNVTVVAKVAVRAATDPVFPP--GIVDVHGILRYSQK  284 (286)
Q Consensus       226 ~~~~~~~~~~~~~~~~~--g~~~~~~i~v~Dva~~~~~~l~~~~~~~--~~~~l~~~~~~s~~  284 (286)
                      +..+.........+++.  |+..++|++++|+|++++.+++.+...+  ++||+++ +.++++
T Consensus       250 ~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~~~~l~~~~~~g~~~~yni~~-~~~s~~  311 (404)
T 1i24_A          250 LNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFT-EQFSVN  311 (404)
T ss_dssp             HHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCCCTTCEEEEEECS-EEEEHH
T ss_pred             HHHHHHHHHcCCeeEEeCCCCceECcEEHHHHHHHHHHHHhCcccCCCceEEEECC-CCCcHH
Confidence            34444444334444433  3457899999999999999998776546  7999998 777764

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=100.00  E-value=2.8e-32  Score=247.51  Aligned_cols=228  Identities=18%  Similarity=0.166  Sum_probs=173.2

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHC---CCeEEEEecCCCcccc--------------------cccCCceeEEeccC
Q 023205           53 PPPSEKLLVLGGNGFVGSHICREALDR---GLTVASLSRSGRSSLR--------------------DSWANNVIWHQGNL  109 (286)
Q Consensus        53 ~~~~~~VlVtGatG~iG~~l~~~Ll~~---g~~V~~l~R~~~~~~~--------------------~~~~~~~~~i~~Dl  109 (286)
                      ...+|+|||||||||||++++++|+++   |++|++++|+.+....                    .....+++++.+|+
T Consensus        70 ~~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl  149 (478)
T 4dqv_A           70 SPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAGDK  149 (478)
T ss_dssp             CSCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECCT
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeEC
Confidence            345789999999999999999999999   8999999998764210                    01136899999999


Q ss_pred             C------CHhHHHHHhcCCCEEEEccccCC--CcchhhhhhhHHHHHHHHHHHHcCCCEEEEEecC-CcCCCCc------
Q 023205          110 L------SSDSWKEALDGVTAVISCVGGFG--SNSYMYKINGTANINAIRAASEKGVKRFVYISAA-DFGVANY------  174 (286)
Q Consensus       110 ~------d~~~~~~~~~~~d~vi~~a~~~~--~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~-~~~~~~~------  174 (286)
                      +      |.+.+.++++++|+|||||+..+  +....+++|+.++.+++++|++.++++|||+||. +|+....      
T Consensus       150 ~~~~~gld~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~~V~iSS~~v~~~~~~~~~~E~  229 (478)
T 4dqv_A          150 SEPDLGLDQPMWRRLAETVDLIVDSAAMVNAFPYHELFGPNVAGTAELIRIALTTKLKPFTYVSTADVGAAIEPSAFTED  229 (478)
T ss_dssp             TSGGGGCCHHHHHHHHHHCCEEEECCSSCSBSSCCEEHHHHHHHHHHHHHHHTSSSCCCEEEEEEGGGGTTSCTTTCCSS
T ss_pred             CCcccCCCHHHHHHHHcCCCEEEECccccCCcCHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeehhhcCccCCCCcCCc
Confidence            8      66789999999999999999864  3446789999999999999999999999999994 3433111      


Q ss_pred             ----c-----------ccchHHHHHHHHHHHHH---hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccC
Q 023205          175 ----L-----------LQGYYEGKRAAETELLT---RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPL  236 (286)
Q Consensus       175 ----~-----------~~~y~~sK~~~E~~~~~---~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (286)
                          +           .+.|+.+|+.+|.++++   ..|++++++|||++||+..........    .++..+.......
T Consensus       230 ~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ivRpg~v~G~~~~~g~~~~~----~~~~~l~~~~~~~  305 (478)
T 4dqv_A          230 ADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLCALPVAVFRCGMILADTSYAGQLNMS----DWVTRMVLSLMAT  305 (478)
T ss_dssp             SCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECCSSSSSCCCTT----BHHHHHHHHHHHH
T ss_pred             ccccccCcccccccccccchHHHHHHHHHHHHHHHHHhCCCeEEEECceeeCCCccCCcCCHH----HHHHHHHHHHHHc
Confidence                0           14599999999998876   269999999999999986532222222    2233333332222


Q ss_pred             CCCCC----C------CCccCCCccHHHHHHHHHHHhcC----CCCCCCeeEeccccc--cccc
Q 023205          237 SQLPL----V------GPLFTPPVNVTVVAKVAVRAATD----PVFPPGIVDVHGILR--YSQK  284 (286)
Q Consensus       237 ~~~~~----~------g~~~~~~i~v~Dva~~~~~~l~~----~~~~~~~~~l~~~~~--~s~~  284 (286)
                      +.+|.    .      ++..++|++++|+|++++.++..    +...+++||+++++.  ++|+
T Consensus       306 g~~P~~~~~~~~~G~~~~~~~~~v~vdDvA~ai~~~~~~~~~~~~~~~~~ynv~~~~~~~~s~~  369 (478)
T 4dqv_A          306 GIAPRSFYEPDSEGNRQRAHFDGLPVTFVAEAIAVLGARVAGSSLAGFATYHVMNPHDDGIGLD  369 (478)
T ss_dssp             CEEESCSBCCCTTSCCCCCCCCEEEHHHHHHHHHHHHHTTC-CCCCSEEEEEESCCCCSSCSHH
T ss_pred             CcccccccccccccccccceeeeeeHHHHHHHHHHHHhhcccCCCCCCceEEecCCCCCCcCHH
Confidence            22221    1      14578999999999999999876    455578999999988  8875

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=100.00  E-value=4.6e-32  Score=237.58  Aligned_cols=218  Identities=17%  Similarity=0.203  Sum_probs=170.6

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHC-CCeEEEEecCCCc-ccc---cc-cCCceeEEeccCCCHhHHHHHhc--CCCEEEEc
Q 023205           57 EKLLVLGGNGFVGSHICREALDR-GLTVASLSRSGRS-SLR---DS-WANNVIWHQGNLLSSDSWKEALD--GVTAVISC  128 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~-g~~V~~l~R~~~~-~~~---~~-~~~~~~~i~~Dl~d~~~~~~~~~--~~d~vi~~  128 (286)
                      |+||||||+||||++++++|+++ |++|++++|+... ...   .. ...+++++.+|++|.+.+.++++  ++|+|||+
T Consensus         1 MkvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~   80 (361)
T 1kew_A            1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAVMHL   80 (361)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             CEEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhhhhhhcCCCeEEEECCCCCHHHHHHHHhhcCCCEEEEC
Confidence            47999999999999999999998 7999999997521 111   11 13478999999999999999998  89999999


Q ss_pred             cccCC------CcchhhhhhhHHHHHHHHHHHHc--CCC-------EEEEEecC-CcCCC--------------------
Q 023205          129 VGGFG------SNSYMYKINGTANINAIRAASEK--GVK-------RFVYISAA-DFGVA--------------------  172 (286)
Q Consensus       129 a~~~~------~~~~~~~~~~~~~~~l~~~a~~~--~v~-------~~v~~Ss~-~~~~~--------------------  172 (286)
                      |+...      +....+++|+.++.+++++|.+.  +++       +|||+||. +|+..                    
T Consensus        81 A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~~~~~~~E~~~  160 (361)
T 1kew_A           81 AAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTA  160 (361)
T ss_dssp             CSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCTTSC
T ss_pred             CCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCcccccccccccCCCCCCCCC
Confidence            99764      34567899999999999999988  887       99999995 45532                    


Q ss_pred             CccccchHHHHHHHHHHHHH---hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCC--CCccC
Q 023205          173 NYLLQGYYEGKRAAETELLT---RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLV--GPLFT  247 (286)
Q Consensus       173 ~~~~~~y~~sK~~~E~~~~~---~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~  247 (286)
                      ..+.+.|+.+|..+|.+++.   ..|++++++||+.+||+.....         .++..+.........++..  ++...
T Consensus       161 ~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~vrp~~v~G~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (361)
T 1kew_A          161 YAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPE---------KLIPLVILNALEGKPLPIYGKGDQIR  231 (361)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTT---------SHHHHHHHHHHHTCCEEEETTSCCEE
T ss_pred             CCCCCccHHHHHHHHHHHHHHHHHhCCcEEEEeeceeECCCCCcc---------cHHHHHHHHHHcCCCceEcCCCceeE
Confidence            13457899999999998865   3589999999999999975321         1223333333333344433  34567


Q ss_pred             CCccHHHHHHHHHHHhcCCCCCCCeeEeccccccccc
Q 023205          248 PPVNVTVVAKVAVRAATDPVFPPGIVDVHGILRYSQK  284 (286)
Q Consensus       248 ~~i~v~Dva~~~~~~l~~~~~~~~~~~l~~~~~~s~~  284 (286)
                      ++++++|+|++++.+++.+. .+++||+++++.++++
T Consensus       232 ~~i~v~Dva~a~~~~~~~~~-~g~~~~v~~~~~~s~~  267 (361)
T 1kew_A          232 DWLYVEDHARALHMVVTEGK-AGETYNIGGHNEKKNL  267 (361)
T ss_dssp             EEEEHHHHHHHHHHHHHHCC-TTCEEEECCCCEEEHH
T ss_pred             eeEEHHHHHHHHHHHHhCCC-CCCEEEecCCCeeeHH
Confidence            89999999999999997654 4889999999888775

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=100.00  E-value=5.4e-33  Score=238.77  Aligned_cols=217  Identities=20%  Similarity=0.162  Sum_probs=164.0

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcC--CCEEEEccccC
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDG--VTAVISCVGGF  132 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~--~d~vi~~a~~~  132 (286)
                      ++|+|||||||||||++++++|+++|+      +....      ...++++.+|++|++.+.+++++  +|+|||+|+..
T Consensus         5 ~~~~vlVtGatG~iG~~l~~~L~~~g~------~~~~~------~~~~~~~~~D~~d~~~~~~~~~~~~~d~Vih~A~~~   72 (319)
T 4b8w_A            5 QSMRILVTGGSGLVGKAIQKVVADGAG------LPGED------WVFVSSKDADLTDTAQTRALFEKVQPTHVIHLAAMV   72 (319)
T ss_dssp             CCCEEEEETCSSHHHHHHHHHHHTTTC------CTTCE------EEECCTTTCCTTSHHHHHHHHHHSCCSEEEECCCCC
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHhcCC------ccccc------ccccCceecccCCHHHHHHHHhhcCCCEEEECceec
Confidence            468999999999999999999999997      21111      12455668999999999999987  99999999975


Q ss_pred             C-------CcchhhhhhhHHHHHHHHHHHHcCCCEEEEEecC-CcCCCC--------------cccc-chHHHHHHHHHH
Q 023205          133 G-------SNSYMYKINGTANINAIRAASEKGVKRFVYISAA-DFGVAN--------------YLLQ-GYYEGKRAAETE  189 (286)
Q Consensus       133 ~-------~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~-~~~~~~--------------~~~~-~y~~sK~~~E~~  189 (286)
                      .       ++...+++|+.++.+++++|++.++++|||+||. +|+...              .+.+ +|+.+|..+|++
T Consensus        73 ~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~  152 (319)
T 4b8w_A           73 GGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVGARKVVSCLSTCIFPDKTTYPIDETMIHNGPPHNSNFGYSYAKRMIDVQ  152 (319)
T ss_dssp             CCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGSCSSCCSSBCGGGGGBSCCCSSSHHHHHHHHHHHHH
T ss_pred             ccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEEcchhhcCCCCCCCccccccccCCCCCCcchHHHHHHHHHHH
Confidence            4       3345689999999999999999999999999994 454321              1222 599999999998


Q ss_pred             HHH---hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCC--CCccCCCccHHHHHHHHHHHhc
Q 023205          190 LLT---RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLV--GPLFTPPVNVTVVAKVAVRAAT  264 (286)
Q Consensus       190 ~~~---~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~i~v~Dva~~~~~~l~  264 (286)
                      ++.   ..|++++++||+.+|||........ ...+..++..+........+++..  |+..++|++++|+|++++.+++
T Consensus       153 ~~~~~~~~~~~~~ilRp~~v~Gp~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~  231 (319)
T 4b8w_A          153 NRAYFQQYGCTFTAVIPTNVFGPHDNFNIED-GHVLPGLIHKVHLAKSSGSALTVWGTGNPRRQFIYSLDLAQLFIWVLR  231 (319)
T ss_dssp             HHHHHHHHCCEEEEEEECEEECTTCCCCTTT-SCHHHHHHHHHHHHHHHTCCEEEESCSCCEECEEEHHHHHHHHHHHHH
T ss_pred             HHHHHHhhCCCEEEEeeccccCCCCCCCCcc-ccccHHHHHHHHHHhccCCceEEeCCCCeeEEEEeHHHHHHHHHHHHh
Confidence            865   4689999999999999986532111 011112222222224444555543  4557899999999999999998


Q ss_pred             CCC-CCCCeeEeccccccccc
Q 023205          265 DPV-FPPGIVDVHGILRYSQK  284 (286)
Q Consensus       265 ~~~-~~~~~~~l~~~~~~s~~  284 (286)
                      ++. ..+++||+++++.+|++
T Consensus       232 ~~~~~~~~~~ni~~~~~~s~~  252 (319)
T 4b8w_A          232 EYNEVEPIILSVGEEDEVSIK  252 (319)
T ss_dssp             HCCCSSCEEECCCGGGCEEHH
T ss_pred             ccccCCceEEEecCCCceeHH
Confidence            743 44679999999998875

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=100.00  E-value=1.2e-32  Score=239.88  Aligned_cols=223  Identities=17%  Similarity=0.243  Sum_probs=167.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc----cc-cCCceeEEeccCCCHhHHHHHhcC--CCEEEEc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR----DS-WANNVIWHQGNLLSSDSWKEALDG--VTAVISC  128 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~----~~-~~~~~~~i~~Dl~d~~~~~~~~~~--~d~vi~~  128 (286)
                      ||+|||||||||||++++++|+++|++|++++|.......    .. ...+++++.+|++|++++.+++++  +|+|||+
T Consensus         1 M~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~   80 (347)
T 1orr_A            1 MAKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHL   80 (347)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             CcEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhccCCceEEEEcCCCCHHHHHHHHhccCCCEEEEC
Confidence            4689999999999999999999999999999986422110    11 123689999999999999999998  9999999


Q ss_pred             cccCC------CcchhhhhhhHHHHHHHHHHHHcCCC-EEEEEecC-CcCCC--------------------------Cc
Q 023205          129 VGGFG------SNSYMYKINGTANINAIRAASEKGVK-RFVYISAA-DFGVA--------------------------NY  174 (286)
Q Consensus       129 a~~~~------~~~~~~~~~~~~~~~l~~~a~~~~v~-~~v~~Ss~-~~~~~--------------------------~~  174 (286)
                      |+...      ++...+++|+.++.+++++|++.+++ +|||+||. +|+..                          ..
T Consensus        81 A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~  160 (347)
T 1orr_A           81 AGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLD  160 (347)
T ss_dssp             CCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTSCCC
T ss_pred             CcccChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEeccHHHhCCCCcCCcccccccccccccccCccccCCCC
Confidence            99754      34467789999999999999999886 99999994 45421                          12


Q ss_pred             cccchHHHHHHHHHHHHH---hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHH-HHhcccCC----CCCC--CCC
Q 023205          175 LLQGYYEGKRAAETELLT---RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMV-LQHAKPLS----QLPL--VGP  244 (286)
Q Consensus       175 ~~~~y~~sK~~~E~~~~~---~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~----~~~~--~g~  244 (286)
                      +.+.|+.+|..+|++++.   ..|++++++||+.+||+.......      ...+..+ ........    ++..  .|+
T Consensus       161 ~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~g~g~  234 (347)
T 1orr_A          161 FHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYD------QGWVGWFCQKAVEIKNGINKPFTISGNGK  234 (347)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTT------BCHHHHHHHHHHHHHTTCCCCEEEESSSC
T ss_pred             CCCchHHHHHHHHHHHHHHHHHhCCcEEEEccCceeCcCCCCCCc------CcHHHHHHHHHHhCcccCCCCeEEecCCc
Confidence            457899999999998875   358999999999999997543210      0112222 22111110    2322  345


Q ss_pred             ccCCCccHHHHHHHHHHHhcC-CCCCCCeeEecccc--ccccc
Q 023205          245 LFTPPVNVTVVAKVAVRAATD-PVFPPGIVDVHGIL--RYSQK  284 (286)
Q Consensus       245 ~~~~~i~v~Dva~~~~~~l~~-~~~~~~~~~l~~~~--~~s~~  284 (286)
                      ..++|++++|+|++++.+++. +...+++||++++.  .+|++
T Consensus       235 ~~~~~i~v~Dva~a~~~~~~~~~~~~g~~~~v~~~~~~~~s~~  277 (347)
T 1orr_A          235 QVRDVLHAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLL  277 (347)
T ss_dssp             CEEECEEHHHHHHHHHHHHHTHHHHTTCEEEESSCGGGEEEHH
T ss_pred             ceEeeEEHHHHHHHHHHHHhccccCCCCEEEeCCCCCCCccHH
Confidence            578999999999999999986 23457899999986  37764

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=100.00  E-value=1.8e-32  Score=224.48  Aligned_cols=205  Identities=16%  Similarity=0.048  Sum_probs=158.6

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccccCCCcc
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFGSNS  136 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~~~~~~  136 (286)
                      |+||||||||+||++++++|+++|++|++++|++++. ......+++++.+|++|++.  ++++++|+|||+||.... .
T Consensus         1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~-~~~~~~~~~~~~~D~~d~~~--~~~~~~d~vi~~ag~~~~-~   76 (224)
T 3h2s_A            1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKA-ADRLGATVATLVKEPLVLTE--ADLDSVDAVVDALSVPWG-S   76 (224)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHTCTTSEEEECCGGGCCH--HHHTTCSEEEECCCCCTT-S
T ss_pred             CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEEeccccc-ccccCCCceEEecccccccH--hhcccCCEEEECCccCCC-c
Confidence            5799999999999999999999999999999986552 22234689999999999887  888999999999998632 2


Q ss_pred             hhhhhhhHHHHHHHHHHHHcCCCEEEEEecC-C-cCCCC------------ccccchHHHHHHHHHHH--HHhCCCcEEE
Q 023205          137 YMYKINGTANINAIRAASEKGVKRFVYISAA-D-FGVAN------------YLLQGYYEGKRAAETEL--LTRYPYGGVI  200 (286)
Q Consensus       137 ~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~-~-~~~~~------------~~~~~y~~sK~~~E~~~--~~~~g~~~~i  200 (286)
                      .....|+.++.++++++++.+ ++||++||. . ++...            .+...|+.+|...|.+.  .+..++++++
T Consensus        77 ~~~~~n~~~~~~l~~a~~~~~-~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~i~~~i  155 (224)
T 3h2s_A           77 GRGYLHLDFATHLVSLLRNSD-TLAVFILGSASLAMPGADHPMILDFPESAASQPWYDGALYQYYEYQFLQMNANVNWIG  155 (224)
T ss_dssp             SCTHHHHHHHHHHHHTCTTCC-CEEEEECCGGGSBCTTCSSCGGGGCCGGGGGSTTHHHHHHHHHHHHHHTTCTTSCEEE
T ss_pred             chhhHHHHHHHHHHHHHHHcC-CcEEEEecceeeccCCCCccccccCCCCCccchhhHHHHHHHHHHHHHHhcCCCcEEE
Confidence            346789999999999999999 899999984 2 21111            12678999999999642  2357999999


Q ss_pred             EeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcCCCCCCCeeEeccccc
Q 023205          201 LRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDPVFPPGIVDVHGILR  280 (286)
Q Consensus       201 lRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~l~~~~~  280 (286)
                      +||+.+||+.....+.                 .....++. ++...++++++|+|++++.+++++...+++|++.+.+.
T Consensus       156 vrp~~v~g~~~~~~~~-----------------~~~~~~~~-~~~~~~~i~~~DvA~~~~~~l~~~~~~g~~~~~~~~~~  217 (224)
T 3h2s_A          156 ISPSEAFPSGPATSYV-----------------AGKDTLLV-GEDGQSHITTGNMALAILDQLEHPTAIRDRIVVRDADL  217 (224)
T ss_dssp             EEECSBCCCCCCCCEE-----------------EESSBCCC-CTTSCCBCCHHHHHHHHHHHHHSCCCTTSEEEEEECC-
T ss_pred             EcCccccCCCcccCce-----------------eccccccc-CCCCCceEeHHHHHHHHHHHhcCccccCCEEEEecCcc
Confidence            9999999984422110                 01112222 34456899999999999999999998899999999988


Q ss_pred             cccc
Q 023205          281 YSQK  284 (286)
Q Consensus       281 ~s~~  284 (286)
                      .+|.
T Consensus       218 ~~~~  221 (224)
T 3h2s_A          218 EHHH  221 (224)
T ss_dssp             ----
T ss_pred             hhcc
Confidence            8775

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=100.00  E-value=2.5e-32  Score=244.67  Aligned_cols=228  Identities=18%  Similarity=0.198  Sum_probs=174.9

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCccc-----------------ccccCCceeEEeccCCCHhHH
Q 023205           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSL-----------------RDSWANNVIWHQGNLLSSDSW  115 (286)
Q Consensus        53 ~~~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~-----------------~~~~~~~~~~i~~Dl~d~~~~  115 (286)
                      ...+++||||||||+||++++++|++.|++|++++|+.....                 ......+++++.+|++|++.+
T Consensus        66 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l  145 (427)
T 4f6c_A           66 HRPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDV  145 (427)
T ss_dssp             CCCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCC
T ss_pred             CCCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccC
Confidence            345679999999999999999999999999999999977210                 011136899999999998888


Q ss_pred             HHHhcCCCEEEEccccCC---CcchhhhhhhHHHHHHHHHHHHcCCCEEEEEecCCcCCC------------------Cc
Q 023205          116 KEALDGVTAVISCVGGFG---SNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGVA------------------NY  174 (286)
Q Consensus       116 ~~~~~~~d~vi~~a~~~~---~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~~~~~~------------------~~  174 (286)
                      . .+.++|+|||||+...   +....+++|+.++.+++++|++ ++++|||+||...|..                  ..
T Consensus       146 ~-~~~~~d~Vih~A~~~~~~~~~~~~~~~Nv~g~~~l~~aa~~-~~~~~v~~SS~~~G~~~~~~~~~~~~~E~~~~~~~~  223 (427)
T 4f6c_A          146 V-LPENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQ-HHARLIYVSTISVGTYFDIDTEDVTFSEADVYKGQL  223 (427)
T ss_dssp             C-CSSCCSEEEECCCCC-------CHHHHHHHHHHHHHHHHHH-TTCEEEEEEEGGGGSEECSSCSCCEECTTCSCSSCC
T ss_pred             C-CcCCCCEEEECCcccCCCCCHHHHHHHHHHHHHHHHHHHHh-cCCcEEEECchHhCCCccCCCCCccccccccccCCC
Confidence            8 7889999999999764   4457789999999999999998 7899999999543221                  22


Q ss_pred             cccchHHHHHHHHHHHHH--hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCC-CCccCCCcc
Q 023205          175 LLQGYYEGKRAAETELLT--RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLV-GPLFTPPVN  251 (286)
Q Consensus       175 ~~~~y~~sK~~~E~~~~~--~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~i~  251 (286)
                      +.+.|+.+|+.+|.++++  ..|++++++|||.+||+...+.+...  .....+..+.......+.++.. ++..++|++
T Consensus       224 ~~~~Y~~sK~~~E~~~~~~~~~g~~~~ivRpg~v~G~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  301 (427)
T 4f6c_A          224 LTSPYTRSKFYSELKVLEAVNNGLDGRIVRVGNLTSPYNGRWHMRN--IKTNRFSMVMNDLLQLDCIGVSMAEMPVDFSF  301 (427)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHHTTCCEEEEEECCEESCSSSCCCCTT--GGGCHHHHHHHHHHHSSEEEHHHHTCEECCEE
T ss_pred             CCCchHHHHHHHHHHHHHHHHcCCCEEEEeCCeeecCCCCCccccC--cchHHHHHHHHHHHhcCCCCCccccceEEEee
Confidence            668899999999998876  47999999999999999875432111  0112233444444444555532 467889999


Q ss_pred             HHHHHHHHHHHhcCCCCCCCeeEecccccccccC
Q 023205          252 VTVVAKVAVRAATDPVFPPGIVDVHGILRYSQKS  285 (286)
Q Consensus       252 v~Dva~~~~~~l~~~~~~~~~~~l~~~~~~s~~~  285 (286)
                      ++|+|++++.++..+. .+++||+++++.++|..
T Consensus       302 v~DvA~ai~~~~~~~~-~g~~~~l~~~~~~s~~e  334 (427)
T 4f6c_A          302 VDTTARQIVALAQVNT-PQIIYHVLSPNKMPVKS  334 (427)
T ss_dssp             HHHHHHHHHHHTTSCC-CCSEEEESCSCCEEHHH
T ss_pred             HHHHHHHHHHHHcCCC-CCCEEEecCCCCCcHHH
Confidence            9999999999999877 69999999999998863

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=100.00  E-value=4.9e-32  Score=237.19  Aligned_cols=219  Identities=18%  Similarity=0.125  Sum_probs=169.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCC-CeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhc-----CCCEEEEcc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRG-LTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD-----GVTAVISCV  129 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g-~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~-----~~d~vi~~a  129 (286)
                      .|+|||||||||||++++++|+++| ++|++++|+........ ..++. +.+|+.|.+.+..+++     ++|+|||+|
T Consensus        46 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~-~~~~~-~~~d~~~~~~~~~~~~~~~~~~~d~Vih~A  123 (357)
T 2x6t_A           46 GRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVN-LVDLN-IADYMDKEDFLIQIMAGEEFGDVEAIFHEG  123 (357)
T ss_dssp             --CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGGGGG-TTTSC-CSEEEEHHHHHHHHHTTCCCSSCCEEEECC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcchhhc-ccCce-EeeecCcHHHHHHHHhhcccCCCCEEEECC
Confidence            4789999999999999999999999 99999999865421111 12344 7889999999999987     599999999


Q ss_pred             ccCC----CcchhhhhhhHHHHHHHHHHHHcCCCEEEEEecC-CcCCCC----------ccccchHHHHHHHHHHHHH--
Q 023205          130 GGFG----SNSYMYKINGTANINAIRAASEKGVKRFVYISAA-DFGVAN----------YLLQGYYEGKRAAETELLT--  192 (286)
Q Consensus       130 ~~~~----~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~-~~~~~~----------~~~~~y~~sK~~~E~~~~~--  192 (286)
                      +...    +....+++|+.++.+++++|++.++ +|||+||. +|+...          .+.+.|+.+|..+|++++.  
T Consensus       124 ~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~-r~V~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~  202 (357)
T 2x6t_A          124 ACSSTTEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTSDFIESREYEKPLNVFGYSKFLFDEYVRQIL  202 (357)
T ss_dssp             SCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEEGGGGCSCSSCCCSSGGGCCCSSHHHHHHHHHHHHHHHHG
T ss_pred             cccCCccCCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcchHHhCCCCCCCcCCcCCCCCCChhHHHHHHHHHHHHHHH
Confidence            9764    2346778999999999999999999 99999994 455432          2367899999999998875  


Q ss_pred             -hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCC--CCc-cCCCccHHHHHHHHHHHhcCCCC
Q 023205          193 -RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLV--GPL-FTPPVNVTVVAKVAVRAATDPVF  268 (286)
Q Consensus       193 -~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~-~~~~i~v~Dva~~~~~~l~~~~~  268 (286)
                       ..|++++++||+.+|||......     .....+..+.........++..  ++. ..+|++++|+|++++.+++++. 
T Consensus       203 ~~~g~~~~ilRp~~v~Gp~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ai~~~~~~~~-  276 (357)
T 2x6t_A          203 PEANSQIVGFRYFNVYGPREGHKG-----SMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGV-  276 (357)
T ss_dssp             GGCSSCEEEEEECEEESSSCTTCG-----GGSCHHHHHHHHHHTTCCCEEETTGGGCEECEEEHHHHHHHHHHHHHHCC-
T ss_pred             HHcCCCEEEEecCeEECCCCCCCc-----ccchHHHHHHHHHHcCCCcEEeCCCCcceEccEEHHHHHHHHHHHHhcCC-
Confidence             45899999999999999764221     1123344444444444444433  344 6799999999999999998776 


Q ss_pred             CCCeeEeccccccccc
Q 023205          269 PPGIVDVHGILRYSQK  284 (286)
Q Consensus       269 ~~~~~~l~~~~~~s~~  284 (286)
                       +++||+++++.++++
T Consensus       277 -~~~~~i~~~~~~s~~  291 (357)
T 2x6t_A          277 -SGIFNLGTGRAESFQ  291 (357)
T ss_dssp             -CEEEEESCSCCEEHH
T ss_pred             -CCeEEecCCCcccHH
Confidence             889999999988875

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=100.00  E-value=3.3e-32  Score=234.48  Aligned_cols=208  Identities=18%  Similarity=0.149  Sum_probs=162.4

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCc---cccc----ccCCceeEEeccCCCHhHHHHHhcCCCEEEE
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRS---SLRD----SWANNVIWHQGNLLSSDSWKEALDGVTAVIS  127 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~---~~~~----~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~  127 (286)
                      ++|+|||||||||||++++++|+++|++|++++|+...   ....    ....+++++.+|+.          ++|+|||
T Consensus         6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~----------~~d~vi~   75 (321)
T 3vps_A            6 LKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFLEKPVLELEERDLS----------DVRLVYH   75 (321)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSEEECSCGGGCCHHHHT----------TEEEEEE
T ss_pred             CCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhhhccCCCeeEEeCccc----------cCCEEEE
Confidence            46899999999999999999999999999999998762   1111    11245666666664          8999999


Q ss_pred             ccccCC------CcchhhhhhhHHHHHHHHHHHHcCCCEEEEEecC-CcCCCC----------ccccchHHHHHHHHHHH
Q 023205          128 CVGGFG------SNSYMYKINGTANINAIRAASEKGVKRFVYISAA-DFGVAN----------YLLQGYYEGKRAAETEL  190 (286)
Q Consensus       128 ~a~~~~------~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~-~~~~~~----------~~~~~y~~sK~~~E~~~  190 (286)
                      +|+...      .+...++ |+.++.+++++|++.++++|||+||. +|+...          .+.+.|+.+|..+|+++
T Consensus        76 ~a~~~~~~~~~~~~~~~~~-n~~~~~~ll~a~~~~~v~~~v~~SS~~v~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~  154 (321)
T 3vps_A           76 LASHKSVPRSFKQPLDYLD-NVDSGRHLLALCTSVGVPKVVVGSTCEVYGQADTLPTPEDSPLSPRSPYAASKVGLEMVA  154 (321)
T ss_dssp             CCCCCCHHHHTTSTTTTHH-HHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHH
T ss_pred             CCccCChHHHHhCHHHHHH-HHHHHHHHHHHHHHcCCCeEEEecCHHHhCCCCCCCCCCCCCCCCCChhHHHHHHHHHHH
Confidence            998753      3445667 99999999999999999999999994 454321          24678999999999988


Q ss_pred             HH---hCCC-cEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCC--CCccCCCccHHHHHHHHHHHhc
Q 023205          191 LT---RYPY-GGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLV--GPLFTPPVNVTVVAKVAVRAAT  264 (286)
Q Consensus       191 ~~---~~g~-~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~i~v~Dva~~~~~~l~  264 (286)
                      ++   ..++ +++++||+.+||+.....         .++..+.........++..  ++..++|++++|+|++++.+++
T Consensus       155 ~~~~~~~~~~~~~ilRp~~v~G~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~  225 (321)
T 3vps_A          155 GAHQRASVAPEVGIVRFFNVYGPGERPD---------ALVPRLCANLLTRNELPVEGDGEQRRDFTYITDVVDKLVALAN  225 (321)
T ss_dssp             HHHHHSSSSCEEEEEEECEEECTTCCTT---------SHHHHHHHHHHHHSEEEEETTSCCEECEEEHHHHHHHHHHGGG
T ss_pred             HHHHHHcCCCceEEEEeccccCcCCCCC---------ChHHHHHHHHHcCCCeEEeCCCCceEceEEHHHHHHHHHHHHh
Confidence            75   4688 999999999999986542         2344444444444444443  4567899999999999999999


Q ss_pred             CCCCCCCeeEeccccccccc
Q 023205          265 DPVFPPGIVDVHGILRYSQK  284 (286)
Q Consensus       265 ~~~~~~~~~~l~~~~~~s~~  284 (286)
                      ++.. + +||+++++.+++.
T Consensus       226 ~~~~-g-~~~i~~~~~~s~~  243 (321)
T 3vps_A          226 RPLP-S-VVNFGSGQSLSVN  243 (321)
T ss_dssp             SCCC-S-EEEESCSCCEEHH
T ss_pred             cCCC-C-eEEecCCCcccHH
Confidence            8876 6 9999999988875

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=100.00  E-value=3.3e-32  Score=231.15  Aligned_cols=205  Identities=15%  Similarity=0.117  Sum_probs=162.8

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHC--CCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccccCCC
Q 023205           57 EKLLVLGGNGFVGSHICREALDR--GLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFGS  134 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~--g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~~~~  134 (286)
                      |+|||||||||||++++++|+++  |++|++++|++++.. .....+++++.+|++|++++.++++++|+|||+|+....
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~~~   79 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKAS-TLADQGVEVRHGDYNQPESLQKAFAGVSKLLFISGPHYD   79 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTH-HHHHTTCEEEECCTTCHHHHHHHTTTCSEEEECCCCCSC
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHh-HHhhcCCeEEEeccCCHHHHHHHHhcCCEEEEcCCCCcC
Confidence            47999999999999999999999  999999999865422 112357899999999999999999999999999986321


Q ss_pred             cchhhhhhhHHHHHHHHHHHHcCCCEEEEEecCCcCCCCccccchHHHHHHHHHHHHHhCCCcEEEEeeCeeecCCCCCc
Q 023205          135 NSYMYKINGTANINAIRAASEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLTRYPYGGVILRPGFIYGTRTVGG  214 (286)
Q Consensus       135 ~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~~~~g~~~~ilRp~~v~g~~~~~~  214 (286)
                          .++|+.++.+++++|++.++++|||+||....   .....|+.+|..+|+++++ .|++++++||+.++|+...  
T Consensus        80 ----~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~---~~~~~y~~~K~~~E~~~~~-~~~~~~ilrp~~~~~~~~~--  149 (287)
T 2jl1_A           80 ----NTLLIVQHANVVKAARDAGVKHIAYTGYAFAE---ESIIPLAHVHLATEYAIRT-TNIPYTFLRNALYTDFFVN--  149 (287)
T ss_dssp             ----HHHHHHHHHHHHHHHHHTTCSEEEEEEETTGG---GCCSTHHHHHHHHHHHHHH-TTCCEEEEEECCBHHHHSS--
T ss_pred             ----chHHHHHHHHHHHHHHHcCCCEEEEECCCCCC---CCCCchHHHHHHHHHHHHH-cCCCeEEEECCEeccccch--
Confidence                15689999999999999999999999995321   1234799999999998865 8999999999998875311  


Q ss_pred             cccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcCCCCCCCeeEeccccccccc
Q 023205          215 MKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDPVFPPGIVDVHGILRYSQK  284 (286)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~l~~~~~~s~~  284 (286)
                               ..+......   .......++..+++++++|+|++++.+++++...+++||+++++.+|++
T Consensus       150 ---------~~~~~~~~~---~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~~~~~s~~  207 (287)
T 2jl1_A          150 ---------EGLRASTES---GAIVTNAGSGIVNSVTRNELALAAATVLTEEGHENKTYNLVSNQPWTFD  207 (287)
T ss_dssp             ---------GGGHHHHHH---TEEEESCTTCCBCCBCHHHHHHHHHHHHTSSSCTTEEEEECCSSCBCHH
T ss_pred             ---------hhHHHHhhC---CceeccCCCCccCccCHHHHHHHHHHHhcCCCCCCcEEEecCCCcCCHH
Confidence                     111111111   1111223567889999999999999999887666889999999988875

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=100.00  E-value=1.5e-32  Score=236.44  Aligned_cols=211  Identities=19%  Similarity=0.216  Sum_probs=143.5

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcC--CCEEEEccccC
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDG--VTAVISCVGGF  132 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~--~d~vi~~a~~~  132 (286)
                      |+|+|||||||||||++++++|+++|++|++++|+...       ++  ++.+|++|++.+.+++++  +|+|||+|+..
T Consensus         1 m~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-------~~--~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~   71 (315)
T 2ydy_A            1 MNRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR-------PK--FEQVNLLDSNAVHHIIHDFQPHVIVHCAAER   71 (315)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC---------------------------CHHHHHHHCCSEEEECC---
T ss_pred             CCCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC-------CC--eEEecCCCHHHHHHHHHhhCCCEEEECCccc
Confidence            35799999999999999999999999999999987543       12  788999999999999885  89999999875


Q ss_pred             C------CcchhhhhhhHHHHHHHHHHHHcCCCEEEEEecC-CcCCC---------CccccchHHHHHHHHHHHHHhCCC
Q 023205          133 G------SNSYMYKINGTANINAIRAASEKGVKRFVYISAA-DFGVA---------NYLLQGYYEGKRAAETELLTRYPY  196 (286)
Q Consensus       133 ~------~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~-~~~~~---------~~~~~~y~~sK~~~E~~~~~~~g~  196 (286)
                      .      ++...+++|+.++.+++++|.+.++ +|||+||. +|+..         ..+.+.|+.+|..+|++++. .++
T Consensus        72 ~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~-~~~  149 (315)
T 2ydy_A           72 RPDVVENQPDAASQLNVDASGNLAKEAAAVGA-FLIYISSDYVFDGTNPPYREEDIPAPLNLYGKTKLDGEKAVLE-NNL  149 (315)
T ss_dssp             ----------------CHHHHHHHHHHHHHTC-EEEEEEEGGGSCSSSCSBCTTSCCCCCSHHHHHHHHHHHHHHH-HCT
T ss_pred             ChhhhhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEchHHHcCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHH-hCC
Confidence            3      3346778999999999999999887 99999994 44431         23467899999999998876 467


Q ss_pred             cEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcc-cCCCCCCCCCccCCCccHHHHHHHHHHHhcCC---CCCCCe
Q 023205          197 GGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAK-PLSQLPLVGPLFTPPVNVTVVAKVAVRAATDP---VFPPGI  272 (286)
Q Consensus       197 ~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~---~~~~~~  272 (286)
                      +++++||+.+||+......        .++..+..... ....++..++...++++++|+|++++.++.++   ...+++
T Consensus       150 ~~~~lR~~~v~G~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~  221 (315)
T 2ydy_A          150 GAAVLRIPILYGEVEKLEE--------SAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRMLDPSIKGT  221 (315)
T ss_dssp             TCEEEEECSEECSCSSGGG--------STTGGGHHHHHCCSSCEEEECSSBBCCEEHHHHHHHHHHHHHHHHTCTTCCEE
T ss_pred             CeEEEeeeeeeCCCCcccc--------cHHHHHHHHHHhcCCCeeeccCceECcEEHHHHHHHHHHHHHhhccccCCCCe
Confidence            8999999999998764211        11111222222 23334445667889999999999999998753   345889


Q ss_pred             eEeccccccccc
Q 023205          273 VDVHGILRYSQK  284 (286)
Q Consensus       273 ~~l~~~~~~s~~  284 (286)
                      ||+++++.+++.
T Consensus       222 ~~i~~~~~~s~~  233 (315)
T 2ydy_A          222 FHWSGNEQMTKY  233 (315)
T ss_dssp             EECCCSCCBCHH
T ss_pred             EEEcCCCcccHH
Confidence            999999988875

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=100.00  E-value=4.1e-32  Score=231.22  Aligned_cols=198  Identities=19%  Similarity=0.218  Sum_probs=161.9

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhc--CCCEEEEccccC
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD--GVTAVISCVGGF  132 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~--~~d~vi~~a~~~  132 (286)
                      ..++|||||||||||++++++|+++|++|++++|+                .+|++|++.+.++++  ++|+|||+|+..
T Consensus        11 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~----------------~~Dl~d~~~~~~~~~~~~~d~vih~A~~~   74 (292)
T 1vl0_A           11 HHMKILITGANGQLGREIQKQLKGKNVEVIPTDVQ----------------DLDITNVLAVNKFFNEKKPNVVINCAAHT   74 (292)
T ss_dssp             -CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT----------------TCCTTCHHHHHHHHHHHCCSEEEECCCCC
T ss_pred             ccceEEEECCCChHHHHHHHHHHhCCCeEEeccCc----------------cCCCCCHHHHHHHHHhcCCCEEEECCccC
Confidence            35799999999999999999999999999999986                379999999999998  799999999976


Q ss_pred             C------CcchhhhhhhHHHHHHHHHHHHcCCCEEEEEecC-CcCCCC----------ccccchHHHHHHHHHHHHHhCC
Q 023205          133 G------SNSYMYKINGTANINAIRAASEKGVKRFVYISAA-DFGVAN----------YLLQGYYEGKRAAETELLTRYP  195 (286)
Q Consensus       133 ~------~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~-~~~~~~----------~~~~~y~~sK~~~E~~~~~~~g  195 (286)
                      .      ++...+++|+.++.+++++|++.++ +|||+||. +|+...          .+.+.|+.+|..+|++++. .+
T Consensus        75 ~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~-~iv~~SS~~v~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~-~~  152 (292)
T 1vl0_A           75 AVDKCEEQYDLAYKINAIGPKNLAAAAYSVGA-EIVQISTDYVFDGEAKEPITEFDEVNPQSAYGKTKLEGENFVKA-LN  152 (292)
T ss_dssp             CHHHHHHCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGSCSCCSSCBCTTSCCCCCSHHHHHHHHHHHHHHH-HC
T ss_pred             CHHHHhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEechHHeECCCCCCCCCCCCCCCCccHHHHHHHHHHHHHHh-hC
Confidence            4      3346778999999999999999988 99999994 454322          2467899999999998876 34


Q ss_pred             CcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcCCCCCCCeeEe
Q 023205          196 YGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDPVFPPGIVDV  275 (286)
Q Consensus       196 ~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~l  275 (286)
                      .+++++||+.+||+ ..           .++..+.........++..++...++++++|+|++++.+++++  .+++||+
T Consensus       153 ~~~~~lR~~~v~G~-~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~--~~~~~~i  218 (292)
T 1vl0_A          153 PKYYIVRTAWLYGD-GN-----------NFVKTMINLGKTHDELKVVHDQVGTPTSTVDLARVVLKVIDEK--NYGTFHC  218 (292)
T ss_dssp             SSEEEEEECSEESS-SS-----------CHHHHHHHHHHHCSEEEEESSCEECCEEHHHHHHHHHHHHHHT--CCEEEEC
T ss_pred             CCeEEEeeeeeeCC-Cc-----------ChHHHHHHHHhcCCcEEeecCeeeCCccHHHHHHHHHHHHhcC--CCcEEEe
Confidence            58999999999998 31           1233333333333444555677889999999999999999876  5899999


Q ss_pred             ccccccccc
Q 023205          276 HGILRYSQK  284 (286)
Q Consensus       276 ~~~~~~s~~  284 (286)
                      ++++.++++
T Consensus       219 ~~~~~~s~~  227 (292)
T 1vl0_A          219 TCKGICSWY  227 (292)
T ss_dssp             CCBSCEEHH
T ss_pred             cCCCCccHH
Confidence            999988875

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=100.00  E-value=2.2e-31  Score=231.81  Aligned_cols=217  Identities=19%  Similarity=0.154  Sum_probs=163.9

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc---cc-cCCceeEEeccCCCHhHHHHHhcCCCEEEEc
Q 023205           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR---DS-WANNVIWHQGNLLSSDSWKEALDGVTAVISC  128 (286)
Q Consensus        53 ~~~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~---~~-~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~  128 (286)
                      ...+|+|||||||||||++++++|+++|++|++++|+......   .. ...+++++.+|+.+.     .+.++|+|||+
T Consensus        24 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~~~d~vih~   98 (343)
T 2b69_A           24 EKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEP-----LYIEVDQIYHL   98 (343)
T ss_dssp             ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTTSC-----CCCCCSEEEEC
T ss_pred             ccCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhhhhccCCceEEEeCccCCh-----hhcCCCEEEEC
Confidence            3456899999999999999999999999999999997543211   11 135789999999875     36789999999


Q ss_pred             cccCC------CcchhhhhhhHHHHHHHHHHHHcCCCEEEEEecC-CcCCC---------------CccccchHHHHHHH
Q 023205          129 VGGFG------SNSYMYKINGTANINAIRAASEKGVKRFVYISAA-DFGVA---------------NYLLQGYYEGKRAA  186 (286)
Q Consensus       129 a~~~~------~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~-~~~~~---------------~~~~~~y~~sK~~~  186 (286)
                      |+...      ++...+++|+.++.+++++|++.++ +|||+||. +|+..               ..+.+.|+.+|..+
T Consensus        99 A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~  177 (343)
T 2b69_A           99 ASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA-RLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVA  177 (343)
T ss_dssp             CSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTC-EEEEEEEGGGGBSCSSSSBCTTCCCBCCSSSTTHHHHHHHHHH
T ss_pred             ccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCC-cEEEECcHHHhCCCCCCCCcccccccCCCCCCCCchHHHHHHH
Confidence            98753      3345678999999999999999887 99999994 45421               12346799999999


Q ss_pred             HHHHHH---hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCC--CCCccCCCccHHHHHHHHHH
Q 023205          187 ETELLT---RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPL--VGPLFTPPVNVTVVAKVAVR  261 (286)
Q Consensus       187 E~~~~~---~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~~~~i~v~Dva~~~~~  261 (286)
                      |++++.   ..+++++++||+.+||+......       ...+..+.........+..  .++..+++++++|+|++++.
T Consensus       178 E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~  250 (343)
T 2b69_A          178 ETMCYAYMKQEGVEVRVARIFNTFGPRMHMND-------GRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVA  250 (343)
T ss_dssp             HHHHHHHHHHHCCCEEEEEECCEECTTCCTTC-------CCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCcEEEEEEcceeCcCCCCCc-------ccHHHHHHHHHHcCCCceEcCCCCeEEeeEeHHHHHHHHHH
Confidence            998764   46899999999999999754221       1222333333223334433  34557899999999999999


Q ss_pred             HhcCCCCCCCeeEeccccccccc
Q 023205          262 AATDPVFPPGIVDVHGILRYSQK  284 (286)
Q Consensus       262 ~l~~~~~~~~~~~l~~~~~~s~~  284 (286)
                      +++.+.  +++||+++++.++++
T Consensus       251 ~~~~~~--~~~~~i~~~~~~s~~  271 (343)
T 2b69_A          251 LMNSNV--SSPVNLGNPEEHTIL  271 (343)
T ss_dssp             HHTSSC--CSCEEESCCCEEEHH
T ss_pred             HHhcCC--CCeEEecCCCCCcHH
Confidence            998654  789999999988875

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=99.98  E-value=1e-31  Score=228.01  Aligned_cols=200  Identities=15%  Similarity=0.074  Sum_probs=156.6

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccccCC
Q 023205           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFG  133 (286)
Q Consensus        54 ~~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~~~  133 (286)
                      .|+|+|||||| ||||++++++|+++|++|++++|++.+.. .....+++++.+|+.|.+     ++++|+|||+|+...
T Consensus         3 ~m~~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~D~~d~~-----~~~~d~vi~~a~~~~   75 (286)
T 3ius_A            3 AMTGTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQME-AIRASGAEPLLWPGEEPS-----LDGVTHLLISTAPDS   75 (286)
T ss_dssp             --CCEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHH-HHHHTTEEEEESSSSCCC-----CTTCCEEEECCCCBT
T ss_pred             CCcCcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhh-hHhhCCCeEEEecccccc-----cCCCCEEEECCCccc
Confidence            35789999998 99999999999999999999999875421 222368999999999854     789999999999865


Q ss_pred             CcchhhhhhhHHHHHHHHHHHH--cCCCEEEEEecC-CcCCCC----------ccccchHHHHHHHHHHHHHhCCCcEEE
Q 023205          134 SNSYMYKINGTANINAIRAASE--KGVKRFVYISAA-DFGVAN----------YLLQGYYEGKRAAETELLTRYPYGGVI  200 (286)
Q Consensus       134 ~~~~~~~~~~~~~~~l~~~a~~--~~v~~~v~~Ss~-~~~~~~----------~~~~~y~~sK~~~E~~~~~~~g~~~~i  200 (286)
                      ...       ..+.++++++++  .++++|||+||. +|+...          .+.+.|+.+|..+|+++++..++++++
T Consensus        76 ~~~-------~~~~~l~~a~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~i  148 (286)
T 3ius_A           76 GGD-------PVLAALGDQIAARAAQFRWVGYLSTTAVYGDHDGAWVDETTPLTPTAARGRWRVMAEQQWQAVPNLPLHV  148 (286)
T ss_dssp             TBC-------HHHHHHHHHHHHTGGGCSEEEEEEEGGGGCCCTTCEECTTSCCCCCSHHHHHHHHHHHHHHHSTTCCEEE
T ss_pred             ccc-------HHHHHHHHHHHhhcCCceEEEEeecceecCCCCCCCcCCCCCCCCCCHHHHHHHHHHHHHHhhcCCCEEE
Confidence            432       234688999988  789999999994 454332          245679999999999888755999999


Q ss_pred             EeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCC-CCccCCCccHHHHHHHHHHHhcCCCCCCCeeEecccc
Q 023205          201 LRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLV-GPLFTPPVNVTVVAKVAVRAATDPVFPPGIVDVHGIL  279 (286)
Q Consensus       201 lRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~l~~~~  279 (286)
                      +||+.+||+.....                .........++. ++..++|++++|+|++++.+++++. .+++||+++++
T Consensus       149 lRp~~v~G~~~~~~----------------~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~-~g~~~~i~~~~  211 (286)
T 3ius_A          149 FRLAGIYGPGRGPF----------------SKLGKGGIRRIIKPGQVFSRIHVEDIAQVLAASMARPD-PGAVYNVCDDE  211 (286)
T ss_dssp             EEECEEEBTTBSSS----------------TTSSSSCCCEEECTTCCBCEEEHHHHHHHHHHHHHSCC-TTCEEEECCSC
T ss_pred             EeccceECCCchHH----------------HHHhcCCccccCCCCcccceEEHHHHHHHHHHHHhCCC-CCCEEEEeCCC
Confidence            99999999975321                111122233333 3457899999999999999999887 48899999999


Q ss_pred             ccccc
Q 023205          280 RYSQK  284 (286)
Q Consensus       280 ~~s~~  284 (286)
                      .++++
T Consensus       212 ~~s~~  216 (286)
T 3ius_A          212 PVPPQ  216 (286)
T ss_dssp             CBCHH
T ss_pred             CccHH
Confidence            98875

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=99.98  E-value=2.6e-32  Score=233.11  Aligned_cols=202  Identities=17%  Similarity=0.186  Sum_probs=164.2

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcC--CCEEEEccccCC-
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDG--VTAVISCVGGFG-  133 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~--~d~vi~~a~~~~-  133 (286)
                      |+|||||||||||++++++|+ +|++|++++|+..            ++.+|+.|++.+.+++++  +|+|||+|+... 
T Consensus         1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~------------~~~~D~~d~~~~~~~~~~~~~d~vih~a~~~~~   67 (299)
T 1n2s_A            1 MNILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK------------EFCGDFSNPKGVAETVRKLRPDVIVNAAAHTAV   67 (299)
T ss_dssp             CEEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS------------SSCCCTTCHHHHHHHHHHHCCSEEEECCCCCCH
T ss_pred             CeEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc------------cccccCCCHHHHHHHHHhcCCCEEEECcccCCH
Confidence            489999999999999999999 8999999999852            357899999999999987  999999998753 


Q ss_pred             -----CcchhhhhhhHHHHHHHHHHHHcCCCEEEEEecC-CcCCCC----------ccccchHHHHHHHHHHHHHhCCCc
Q 023205          134 -----SNSYMYKINGTANINAIRAASEKGVKRFVYISAA-DFGVAN----------YLLQGYYEGKRAAETELLTRYPYG  197 (286)
Q Consensus       134 -----~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~-~~~~~~----------~~~~~y~~sK~~~E~~~~~~~g~~  197 (286)
                           ++...+++|+.++.+++++|++.++ +|||+||. +|+...          .|.+.|+.+|..+|+++++. ..+
T Consensus        68 ~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~-~~~  145 (299)
T 1n2s_A           68 DKAESEPELAQLLNATSVEAIAKAANETGA-WVVHYSTDYVFPGTGDIPWQETDATSPLNVYGKTKLAGEKALQDN-CPK  145 (299)
T ss_dssp             HHHTTCHHHHHHHHTHHHHHHHHHHTTTTC-EEEEEEEGGGSCCCTTCCBCTTSCCCCSSHHHHHHHHHHHHHHHH-CSS
T ss_pred             hhhhcCHHHHHHHHHHHHHHHHHHHHHcCC-cEEEEecccEEeCCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHh-CCC
Confidence                 3346778999999999999999887 89999994 444321          24578999999999988774 349


Q ss_pred             EEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcCCC--C-CCCeeE
Q 023205          198 GVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDPV--F-PPGIVD  274 (286)
Q Consensus       198 ~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~~--~-~~~~~~  274 (286)
                      ++++||+.+||+...           .++..+.........++..|+...++++++|+|++++.+++++.  . .+++||
T Consensus       146 ~~ilRp~~v~G~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~  214 (299)
T 1n2s_A          146 HLIFRTSWVYAGKGN-----------NFAKTMLRLAKERQTLSVINDQYGAPTGAELLADCTAHAIRVALNKPEVAGLYH  214 (299)
T ss_dssp             EEEEEECSEECSSSC-----------CHHHHHHHHHHHCSEEEEECSCEECCEEHHHHHHHHHHHHHHHHHCGGGCEEEE
T ss_pred             eEEEeeeeecCCCcC-----------cHHHHHHHHHhcCCCEEeecCcccCCeeHHHHHHHHHHHHHHhccccccCceEE
Confidence            999999999998653           23344444444444555567778999999999999999998762  2 378999


Q ss_pred             eccccccccc
Q 023205          275 VHGILRYSQK  284 (286)
Q Consensus       275 l~~~~~~s~~  284 (286)
                      +++++.+|++
T Consensus       215 i~~~~~~s~~  224 (299)
T 1n2s_A          215 LVAGGTTTWH  224 (299)
T ss_dssp             CCCBSCEEHH
T ss_pred             EeCCCCCCHH
Confidence            9999988875

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.98  E-value=1.1e-30  Score=210.83  Aligned_cols=197  Identities=16%  Similarity=0.133  Sum_probs=157.4

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccccCCCcc
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFGSNS  136 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~~~~~~  136 (286)
                      |+|+||||||+||++++++|+++|++|++++|++++.. .....+++++.+|++|++++.++++++|+|||+++.... .
T Consensus         4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~~~-~   81 (206)
T 1hdo_A            4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLP-SEGPRPAHVVVGDVLQAADVDKTVAGQDAVIVLLGTRND-L   81 (206)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSC-SSSCCCSEEEESCTTSHHHHHHHHTTCSEEEECCCCTTC-C
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcc-cccCCceEEEEecCCCHHHHHHHHcCCCEEEECccCCCC-C
Confidence            68999999999999999999999999999999876532 222468999999999999999999999999999997643 2


Q ss_pred             hhhhhhhHHHHHHHHHHHHcCCCEEEEEecC-CcCCCCc---cccchHHHHHHHHHHHHHhCCCcEEEEeeCeeecCCCC
Q 023205          137 YMYKINGTANINAIRAASEKGVKRFVYISAA-DFGVANY---LLQGYYEGKRAAETELLTRYPYGGVILRPGFIYGTRTV  212 (286)
Q Consensus       137 ~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~-~~~~~~~---~~~~y~~sK~~~E~~~~~~~g~~~~ilRp~~v~g~~~~  212 (286)
                      ...++|+.++.++++++++.++++||++||. .++....   +...|+.+|..+|+++++ .+++++++||+.++ +...
T Consensus        82 ~~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~y~~~K~~~e~~~~~-~~i~~~~lrp~~~~-~~~~  159 (206)
T 1hdo_A           82 SPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKVPPRLQAVTDDHIRMHKVLRE-SGLKYVAVMPPHIG-DQPL  159 (206)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCTTCSCGGGHHHHHHHHHHHHHHHH-TCSEEEEECCSEEE-CCCC
T ss_pred             CccchHHHHHHHHHHHHHHhCCCeEEEEeeeeeccCcccccccchhHHHHHHHHHHHHHh-CCCCEEEEeCCccc-CCCC
Confidence            2346889999999999999999999999995 3443221   457899999999998754 88999999999983 3321


Q ss_pred             -CccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcCCCCCCCeeEecccc
Q 023205          213 -GGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDPVFPPGIVDVHGIL  279 (286)
Q Consensus       213 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~l~~~~  279 (286)
                       +.+.      .           .....+    . .++++++|+|++++.+++++...+++|++.+++
T Consensus       160 ~~~~~------~-----------~~~~~~----~-~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~g~  205 (206)
T 1hdo_A          160 TGAYT------V-----------TLDGRG----P-SRVISKHDLGHFMLRCLTTDEYDGHSTYPSHQY  205 (206)
T ss_dssp             CSCCE------E-----------ESSSCS----S-CSEEEHHHHHHHHHHTTSCSTTTTCEEEEECCC
T ss_pred             CcceE------e-----------cccCCC----C-CCccCHHHHHHHHHHHhcCccccccceeeeccc
Confidence             1100      0           001111    0 478999999999999999988779999999875

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=99.98  E-value=7.9e-32  Score=232.37  Aligned_cols=209  Identities=16%  Similarity=0.140  Sum_probs=163.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhc--CCCEEEEccccCC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD--GVTAVISCVGGFG  133 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~--~~d~vi~~a~~~~  133 (286)
                      +|+||||||+||||++++++|+++|++|+++.|+.               .+|+.|.+.+.++++  ++|+|||+|+...
T Consensus         3 ~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~---------------~~D~~d~~~~~~~~~~~~~d~vih~a~~~~   67 (321)
T 1e6u_A            3 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD---------------ELNLLDSRAVHDFFASERIDQVYLAAAKVG   67 (321)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT---------------TCCTTCHHHHHHHHHHHCCSEEEECCCCCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc---------------cCCccCHHHHHHHHHhcCCCEEEEcCeecC
Confidence            46899999999999999999999999999988763               379999999999998  9999999999764


Q ss_pred             -------CcchhhhhhhHHHHHHHHHHHHcCCCEEEEEecC-CcCCC--------------Ccc-ccchHHHHHHHHHHH
Q 023205          134 -------SNSYMYKINGTANINAIRAASEKGVKRFVYISAA-DFGVA--------------NYL-LQGYYEGKRAAETEL  190 (286)
Q Consensus       134 -------~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~-~~~~~--------------~~~-~~~y~~sK~~~E~~~  190 (286)
                             ++...+++|+.++.+++++|++.++++|||+||. +|+..              ..| .+.|+.+|..+|+++
T Consensus        68 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~  147 (321)
T 1e6u_A           68 GIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLC  147 (321)
T ss_dssp             CHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGGHHHHHHHHHHHHHH
T ss_pred             CcchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccHHHcCCCCCCCcCccccccCCCCCCCCccHHHHHHHHHHH
Confidence                   2345678999999999999999999999999994 45431              112 258999999999988


Q ss_pred             HH---hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhccc----C-CCCC--CCCCccCCCccHHHHHHHHH
Q 023205          191 LT---RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKP----L-SQLP--LVGPLFTPPVNVTVVAKVAV  260 (286)
Q Consensus       191 ~~---~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~--~~g~~~~~~i~v~Dva~~~~  260 (286)
                      ++   ..+++++++||+.+||+........     ..++..+......    . .+++  ..++..++|++++|+|++++
T Consensus       148 ~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~-----~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~i~v~Dva~~~~  222 (321)
T 1e6u_A          148 ESYNRQYGRDYRSVMPTNLYGPHDNFHPSN-----SHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAASI  222 (321)
T ss_dssp             HHHHHHHCCEEEEEEECEEESTTCCCCTTC-----SSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHHHHHHHH
T ss_pred             HHHHHHhCCCEEEEEeCCcCCcCCCCCCCC-----CccHHHHHHHHHHhhhcCCCceEEcCCCCEEEEeEEHHHHHHHHH
Confidence            75   3589999999999999976422100     1233333332211    1 2333  23456789999999999999


Q ss_pred             HHhcCCCC--------CCCeeEeccccccccc
Q 023205          261 RAATDPVF--------PPGIVDVHGILRYSQK  284 (286)
Q Consensus       261 ~~l~~~~~--------~~~~~~l~~~~~~s~~  284 (286)
                      .+++++..        .+++||+++++.++++
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~  254 (321)
T 1e6u_A          223 HVMELAHEVWLENTQPMLSHINVGTGVDCTIR  254 (321)
T ss_dssp             HHHHSCHHHHHHTSBTTBCCEEESCSCCEEHH
T ss_pred             HHHhCcccccccccccCCceEEeCCCCCccHH
Confidence            99987654        2689999999988875

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.98  E-value=3.9e-31  Score=232.98  Aligned_cols=223  Identities=15%  Similarity=0.047  Sum_probs=168.7

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcc----cccc-------cCCceeEEeccCCCHhHHHHHhcC-
Q 023205           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSS----LRDS-------WANNVIWHQGNLLSSDSWKEALDG-  121 (286)
Q Consensus        54 ~~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~----~~~~-------~~~~~~~i~~Dl~d~~~~~~~~~~-  121 (286)
                      .|+++||||||+||||++++++|+++|++|++++|+....    ....       ...+++++.+|++|++.+.+++++ 
T Consensus        22 ~M~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~  101 (375)
T 1t2a_A           22 HMRNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEV  101 (375)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHH
T ss_pred             hcCcEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhc
Confidence            3457999999999999999999999999999999986541    1111       134789999999999999999986 


Q ss_pred             -CCEEEEccccCC------CcchhhhhhhHHHHHHHHHHHHcCC---CEEEEEecC-CcCCC----------CccccchH
Q 023205          122 -VTAVISCVGGFG------SNSYMYKINGTANINAIRAASEKGV---KRFVYISAA-DFGVA----------NYLLQGYY  180 (286)
Q Consensus       122 -~d~vi~~a~~~~------~~~~~~~~~~~~~~~l~~~a~~~~v---~~~v~~Ss~-~~~~~----------~~~~~~y~  180 (286)
                       +|+|||||+...      ++...+++|+.++.+++++|++.++   ++|||+||. +|+..          ..+.+.|+
T Consensus       102 ~~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~~~~~~~~~Y~  181 (375)
T 1t2a_A          102 KPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYG  181 (375)
T ss_dssp             CCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSBCTTSCCCCCSHHH
T ss_pred             CCCEEEECCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhCCCccceEEEecchhhhCCCCCCCCCccCCCCCCChhH
Confidence             699999999754      2345678999999999999999887   899999994 45432          12457899


Q ss_pred             HHHHHHHHHHHH---hCCCcEEEEeeCeeecCCCCCccccCccccCchHH-HHHHhcccCCCC--CCCCCccCCCccHHH
Q 023205          181 EGKRAAETELLT---RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPME-MVLQHAKPLSQL--PLVGPLFTPPVNVTV  254 (286)
Q Consensus       181 ~sK~~~E~~~~~---~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~g~~~~~~i~v~D  254 (286)
                      .+|..+|.+++.   ..+++++++||+.+|||.....+      ....+. ++..........  ...++..++|++++|
T Consensus       182 ~sK~~~e~~~~~~~~~~~~~~~i~r~~~~~gp~~~~~~------~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~D  255 (375)
T 1t2a_A          182 AAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANF------VTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKD  255 (375)
T ss_dssp             HHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTS------HHHHHHHHHHHHHHTSCSCEEESCTTCEECCEEHHH
T ss_pred             HHHHHHHHHHHHHHHHhCCCEEEEecccccCCCCCCCc------chHHHHHHHHHHHcCCCceeEeCCCCceeeeEEHHH
Confidence            999999998864   45899999999999999753221      001111 222222222221  123456789999999


Q ss_pred             HHHHHHHHhcCCCCCCCeeEeccccccccc
Q 023205          255 VAKVAVRAATDPVFPPGIVDVHGILRYSQK  284 (286)
Q Consensus       255 va~~~~~~l~~~~~~~~~~~l~~~~~~s~~  284 (286)
                      +|++++.+++++.  +++||+++++.++++
T Consensus       256 va~a~~~~~~~~~--~~~~ni~~~~~~s~~  283 (375)
T 1t2a_A          256 YVEAMWLMLQNDE--PEDFVIATGEVHSVR  283 (375)
T ss_dssp             HHHHHHHHHHSSS--CCCEEECCSCCEEHH
T ss_pred             HHHHHHHHHhcCC--CceEEEeCCCcccHH
Confidence            9999999998765  589999999988875

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=99.98  E-value=2.6e-31  Score=226.00  Aligned_cols=204  Identities=15%  Similarity=0.074  Sum_probs=159.1

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHC-CCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccccCCCc
Q 023205           57 EKLLVLGGNGFVGSHICREALDR-GLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFGSN  135 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~-g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~~~~~  135 (286)
                      |+||||||||+||++++++|++. |++|++++|++++.. .....+++++.+|++|++++.++++++|+|||+++.....
T Consensus         1 M~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~-~~~~~~v~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~~~~   79 (289)
T 3e48_A            1 MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVP-DDWRGKVSVRQLDYFNQESMVEAFKGMDTVVFIPSIIHPS   79 (289)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSC-GGGBTTBEEEECCTTCHHHHHHHTTTCSEEEECCCCCCSH
T ss_pred             CEEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHH-HhhhCCCEEEEcCCCCHHHHHHHHhCCCEEEEeCCCCccc
Confidence            47999999999999999999998 899999999976532 2234689999999999999999999999999999875432


Q ss_pred             chhhhhhhHHHHHHHHHHHHcCCCEEEEEecCCcCCCCccccchHHHHHHHHHHHHHhCCCcEEEEeeCeeecCCCCCcc
Q 023205          136 SYMYKINGTANINAIRAASEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLTRYPYGGVILRPGFIYGTRTVGGM  215 (286)
Q Consensus       136 ~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~~~~g~~~~ilRp~~v~g~~~~~~~  215 (286)
                          ..++.++.+++++|++.++++|||+||.  +........+...+..+|+.+.+ .|++++++||++++|+..    
T Consensus        80 ----~~~~~~~~~l~~aa~~~gv~~iv~~Ss~--~~~~~~~~~~~~~~~~~e~~~~~-~g~~~~ilrp~~~~~~~~----  148 (289)
T 3e48_A           80 ----FKRIPEVENLVYAAKQSGVAHIIFIGYY--ADQHNNPFHMSPYFGYASRLLST-SGIDYTYVRMAMYMDPLK----  148 (289)
T ss_dssp             ----HHHHHHHHHHHHHHHHTTCCEEEEEEES--CCSTTCCSTTHHHHHHHHHHHHH-HCCEEEEEEECEESTTHH----
T ss_pred             ----hhhHHHHHHHHHHHHHcCCCEEEEEccc--CCCCCCCCccchhHHHHHHHHHH-cCCCEEEEeccccccccH----
Confidence                3477889999999999999999999994  33222222333444567775554 789999999999998631    


Q ss_pred             ccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcCCCCCCCeeEeccccccccc
Q 023205          216 KLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDPVFPPGIVDVHGILRYSQK  284 (286)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~l~~~~~~s~~  284 (286)
                                 .++.............|+..++|++++|+|++++.++.++...+++|+++ ++.+|++
T Consensus       149 -----------~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~g~~~~~~-~~~~s~~  205 (289)
T 3e48_A          149 -----------PYLPELMNMHKLIYPAGDGRINYITRNDIARGVIAIIKNPDTWGKRYLLS-GYSYDMK  205 (289)
T ss_dssp             -----------HHHHHHHHHTEECCCCTTCEEEEECHHHHHHHHHHHHHCGGGTTCEEEEC-CEEEEHH
T ss_pred             -----------HHHHHHHHCCCEecCCCCceeeeEEHHHHHHHHHHHHcCCCcCCceEEeC-CCcCCHH
Confidence                       12222222222222335778899999999999999999887668999999 9998875

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=99.98  E-value=1e-31  Score=230.48  Aligned_cols=217  Identities=19%  Similarity=0.139  Sum_probs=164.3

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCC-CeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcC-----CCEEEEcccc
Q 023205           58 KLLVLGGNGFVGSHICREALDRG-LTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDG-----VTAVISCVGG  131 (286)
Q Consensus        58 ~VlVtGatG~iG~~l~~~Ll~~g-~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~-----~d~vi~~a~~  131 (286)
                      +|||||||||||++++++|+++| ++|++++|+........ ..++. +.+|+.|.+.+.+++++     +|+|||+|+.
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~-~~~~~-~~~d~~~~~~~~~~~~~~~~~~~d~vi~~a~~   78 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVN-LVDLN-IADYMDKEDFLIQIMAGEEFGDVEAIFHEGAC   78 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHH-HHTSC-CSEEEEHHHHHHHHHTTCCCSSCCEEEECCSC
T ss_pred             CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCchhhh-cCcce-eccccccHHHHHHHHhccccCCCcEEEECccc
Confidence            58999999999999999999999 99999999865421111 11233 78899999999999975     9999999997


Q ss_pred             CC----CcchhhhhhhHHHHHHHHHHHHcCCCEEEEEecC-CcCCCC----------ccccchHHHHHHHHHHHHH---h
Q 023205          132 FG----SNSYMYKINGTANINAIRAASEKGVKRFVYISAA-DFGVAN----------YLLQGYYEGKRAAETELLT---R  193 (286)
Q Consensus       132 ~~----~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~-~~~~~~----------~~~~~y~~sK~~~E~~~~~---~  193 (286)
                      ..    +....+++|+.++.+++++|++.++ +|||+||. +|+...          .|.+.|+.+|..+|++++.   .
T Consensus        79 ~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~  157 (310)
T 1eq2_A           79 SSTTEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTSDFIESREYEKPLNVYGYSKFLFDEYVRQILPE  157 (310)
T ss_dssp             CCTTCCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEEGGGGTTCCSCBCSSGGGCCCSSHHHHHHHHHHHHHHHHGGG
T ss_pred             ccCcccCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEeeHHHhCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHH
Confidence            64    2345678999999999999999999 99999994 444322          2456899999999998875   4


Q ss_pred             CCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCC--CCc-cCCCccHHHHHHHHHHHhcCCCCCC
Q 023205          194 YPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLV--GPL-FTPPVNVTVVAKVAVRAATDPVFPP  270 (286)
Q Consensus       194 ~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~-~~~~i~v~Dva~~~~~~l~~~~~~~  270 (286)
                      .|++++++||+.+||+......     .....+..+.........++..  |+. .+++++++|+|++++.+++++.  +
T Consensus       158 ~g~~~~~lrp~~v~G~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~v~Dva~~~~~~~~~~~--~  230 (310)
T 1eq2_A          158 ANSQIVGFRYFNVYGPREGHKG-----SMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGV--S  230 (310)
T ss_dssp             CSSCEEEEEECEEESSSCGGGG-----GGSCHHHHHHHHHHC-------------CBCEEEHHHHHHHHHHHHHHCC--C
T ss_pred             cCCCEEEEeCCcEECcCCCCCC-----ccchHHHHHHHHHHcCCCcEEecCCCcceEccEEHHHHHHHHHHHHhcCC--C
Confidence            5899999999999999764211     0123444444444444444433  445 7899999999999999998776  8


Q ss_pred             CeeEeccccccccc
Q 023205          271 GIVDVHGILRYSQK  284 (286)
Q Consensus       271 ~~~~l~~~~~~s~~  284 (286)
                      ++||+++++.++++
T Consensus       231 ~~~~i~~~~~~s~~  244 (310)
T 1eq2_A          231 GIFNLGTGRAESFQ  244 (310)
T ss_dssp             EEEEESCSCCBCHH
T ss_pred             CeEEEeCCCccCHH
Confidence            89999999988875

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=99.98  E-value=5.3e-31  Score=228.87  Aligned_cols=228  Identities=23%  Similarity=0.232  Sum_probs=167.3

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc---c---ccCCceeEEeccCCCHhHHHHHhc--CCCEEEEc
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR---D---SWANNVIWHQGNLLSSDSWKEALD--GVTAVISC  128 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~---~---~~~~~~~~i~~Dl~d~~~~~~~~~--~~d~vi~~  128 (286)
                      |+||||||+||||++++++|+++|++|++++|.......   .   ....+++++.+|++|++.+.++++  ++|+|||+
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~D~vih~   80 (338)
T 1udb_A            1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIHF   80 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEEC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhcCCcceEEEccCCCHHHHHHHhhccCCCEEEEC
Confidence            479999999999999999999999999999875432111   0   012468899999999999999887  49999999


Q ss_pred             cccCC------CcchhhhhhhHHHHHHHHHHHHcCCCEEEEEecC-CcCCC----------C-ccccchHHHHHHHHHHH
Q 023205          129 VGGFG------SNSYMYKINGTANINAIRAASEKGVKRFVYISAA-DFGVA----------N-YLLQGYYEGKRAAETEL  190 (286)
Q Consensus       129 a~~~~------~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~-~~~~~----------~-~~~~~y~~sK~~~E~~~  190 (286)
                      ||...      .+...+++|+.++.++++++++.++++||++||. +|+..          . .+.+.|+.+|..+|+++
T Consensus        81 A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~~~Y~~sK~~~e~~~  160 (338)
T 1udb_A           81 AGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDNPKIPYVESFPTGTPQSPYGKSKLMVEQIL  160 (338)
T ss_dssp             CSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSSHHHHHHHHHHHHH
T ss_pred             CccCccccchhcHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccHHHhCCCCCCCcCcccCCCCCCChHHHHHHHHHHHH
Confidence            98653      2345678999999999999999999999999994 45432          1 12578999999999988


Q ss_pred             HH---hC-CCcEEEEeeCeeecCCCCCcccc-CccccCchHHHHHHhcc-cCCCCCC--------CCCccCCCccHHHHH
Q 023205          191 LT---RY-PYGGVILRPGFIYGTRTVGGMKL-PLGVIGSPMEMVLQHAK-PLSQLPL--------VGPLFTPPVNVTVVA  256 (286)
Q Consensus       191 ~~---~~-g~~~~ilRp~~v~g~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~--------~g~~~~~~i~v~Dva  256 (286)
                      +.   .. +++++++||+.+||+...+.+.. +......+...+..... ....++.        .|+..++|||++|+|
T Consensus       161 ~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dva  240 (338)
T 1udb_A          161 TDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDLA  240 (338)
T ss_dssp             HHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEECEEEHHHHH
T ss_pred             HHHHHhcCCCceEEEeeceecCCCcccccccccccchhhHHHHHHHHHHhcCCCcEEecCcccCCCCceeeeeEEHHHHH
Confidence            65   33 79999999999999854322111 01111234444444332 1222222        245578999999999


Q ss_pred             HHHHHHhcCC--CCCCCeeEeccccccccc
Q 023205          257 KVAVRAATDP--VFPPGIVDVHGILRYSQK  284 (286)
Q Consensus       257 ~~~~~~l~~~--~~~~~~~~l~~~~~~s~~  284 (286)
                      ++++.+++.+  ...+++||+++++.+|++
T Consensus       241 ~a~~~~l~~~~~~~~~~~yni~~~~~~s~~  270 (338)
T 1udb_A          241 DGHVVAMEKLANKPGVHIYNLGAGVGNSVL  270 (338)
T ss_dssp             HHHHHHHHHHTTCCEEEEEEESCSCCEEHH
T ss_pred             HHHHHHHhhhhccCCCcEEEecCCCceeHH
Confidence            9999998753  222379999999888775

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=99.97  E-value=2.4e-31  Score=231.74  Aligned_cols=212  Identities=15%  Similarity=0.150  Sum_probs=169.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHC-CC-eEEEEecCCCcccc---cccCCceeEEeccCCCHhHHHHHhcCCCEEEEccc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDR-GL-TVASLSRSGRSSLR---DSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVG  130 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~-g~-~V~~l~R~~~~~~~---~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~  130 (286)
                      +|+||||||||+||++++++|+++ |+ +|++++|++.+...   .....+++++.+|+.|.+.+.++++++|+|||+|+
T Consensus        21 ~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~D~Vih~Aa  100 (344)
T 2gn4_A           21 NQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRDLERLNYALEGVDICIHAAA  100 (344)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCTTCHHHHHHHTTTCSEEEECCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCCCCHHHHHHHHhcCCEEEECCC
Confidence            579999999999999999999999 97 99999998654211   11135899999999999999999999999999998


Q ss_pred             cCC------CcchhhhhhhHHHHHHHHHHHHcCCCEEEEEecCCcCCCCccccchHHHHHHHHHHHHHh------CCCcE
Q 023205          131 GFG------SNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLTR------YPYGG  198 (286)
Q Consensus       131 ~~~------~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~~~------~g~~~  198 (286)
                      ...      ++...+++|+.++.+++++|.+.++++||++||..   ...|.+.|+.+|..+|+++...      .|+++
T Consensus       101 ~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~v~~~V~~SS~~---~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~g~~~  177 (344)
T 2gn4_A          101 LKHVPIAEYNPLECIKTNIMGASNVINACLKNAISQVIALSTDK---AANPINLYGATKLCSDKLFVSANNFKGSSQTQF  177 (344)
T ss_dssp             CCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGG---GSSCCSHHHHHHHHHHHHHHHGGGCCCSSCCEE
T ss_pred             CCCCCchhcCHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecCCc---cCCCccHHHHHHHHHHHHHHHHHHHhCCCCcEE
Confidence            753      23467889999999999999999999999999942   2235678999999999988752      57999


Q ss_pred             EEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCC-CCCCC-CCccCCCccHHHHHHHHHHHhcCCCCCCCeeEec
Q 023205          199 VILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLS-QLPLV-GPLFTPPVNVTVVAKVAVRAATDPVFPPGIVDVH  276 (286)
Q Consensus       199 ~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-g~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~l~  276 (286)
                      +++|||++||+..            ..+..+........ ++++. ++..++|++++|+|++++.+++++. .+++|++.
T Consensus       178 ~~vRpg~v~g~~~------------~~i~~~~~~~~~g~~~~~i~~~~~~r~~i~v~D~a~~v~~~l~~~~-~g~~~~~~  244 (344)
T 2gn4_A          178 SVVRYGNVVGSRG------------SVVPFFKKLVQNKASEIPITDIRMTRFWITLDEGVSFVLKSLKRMH-GGEIFVPK  244 (344)
T ss_dssp             EEECCCEETTCTT------------SHHHHHHHHHHHTCCCEEESCTTCEEEEECHHHHHHHHHHHHHHCC-SSCEEEEC
T ss_pred             EEEEeccEECCCC------------CHHHHHHHHHHcCCCceEEeCCCeEEeeEEHHHHHHHHHHHHhhcc-CCCEEecC
Confidence            9999999999863            23444444443333 45433 4456789999999999999998764 47899998


Q ss_pred             cccccccc
Q 023205          277 GILRYSQK  284 (286)
Q Consensus       277 ~~~~~s~~  284 (286)
                      ++. +++.
T Consensus       245 ~~~-~s~~  251 (344)
T 2gn4_A          245 IPS-MKMT  251 (344)
T ss_dssp             CCE-EEHH
T ss_pred             CCc-EEHH
Confidence            874 6653

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=99.97  E-value=7.2e-31  Score=220.90  Aligned_cols=194  Identities=15%  Similarity=0.051  Sum_probs=164.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccccCC--
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFG--  133 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~~~--  133 (286)
                      +|+||||||+|+||++++++|+++|++|++++|+..+..    ..+++++.+|++|.+++.++++++|+||||||...  
T Consensus         3 ~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~----~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~Ag~~~~~   78 (267)
T 3rft_A            3 MKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA----GPNEECVQCDLADANAVNAMVAGCDGIVHLGGISVEK   78 (267)
T ss_dssp             EEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC----CTTEEEEECCTTCHHHHHHHHTTCSEEEECCSCCSCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc----CCCCEEEEcCCCCHHHHHHHHcCCCEEEECCCCcCcC
Confidence            468999999999999999999999999999999976532    46899999999999999999999999999999753  


Q ss_pred             CcchhhhhhhHHHHHHHHHHHHcCCCEEEEEecC-CcCC-----------CCccccchHHHHHHHHHHHHH---hCCCcE
Q 023205          134 SNSYMYKINGTANINAIRAASEKGVKRFVYISAA-DFGV-----------ANYLLQGYYEGKRAAETELLT---RYPYGG  198 (286)
Q Consensus       134 ~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~-~~~~-----------~~~~~~~y~~sK~~~E~~~~~---~~g~~~  198 (286)
                      +....+++|+.++.++++++++.++++||++||. .++.           +..+...|+.+|..+|.+++.   ..|+++
T Consensus        79 ~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~g~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~a~~~g~~~  158 (267)
T 3rft_A           79 PFEQILQGNIIGLYNLYEAARAHGQPRIVFASSNHTIGYYPQTERLGPDVPARPDGLYGVSKCFGENLARMYFDKFGQET  158 (267)
T ss_dssp             CHHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGTTSBTTSCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCE
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcchHHhCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHhCCeE
Confidence            3356789999999999999999999999999994 4432           223457899999999997753   579999


Q ss_pred             EEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcCCCCCCCeeEeccc
Q 023205          199 VILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDPVFPPGIVDVHGI  278 (286)
Q Consensus       199 ~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~l~~~  278 (286)
                      +++||+.++|+...                              ++...+|++++|+++++..+++.+...+.++++.++
T Consensus       159 ~~vr~~~v~~~~~~------------------------------~~~~~~~~~~~d~a~~~~~~~~~~~~~~~~~~~~s~  208 (267)
T 3rft_A          159 ALVRIGSCTPEPNN------------------------------YRMLSTWFSHDDFVSLIEAVFRAPVLGCPVVWGASA  208 (267)
T ss_dssp             EEEEECBCSSSCCS------------------------------TTHHHHBCCHHHHHHHHHHHHHCSCCCSCEEEECCC
T ss_pred             EEEEeecccCCCCC------------------------------CCceeeEEcHHHHHHHHHHHHhCCCCCceEEEEeCC
Confidence            99999999986432                              123456899999999999999988876778999888


Q ss_pred             ccccc
Q 023205          279 LRYSQ  283 (286)
Q Consensus       279 ~~~s~  283 (286)
                      +..+|
T Consensus       209 ~~~~~  213 (267)
T 3rft_A          209 NDAGW  213 (267)
T ss_dssp             CTTCC
T ss_pred             CCCCc
Confidence            77665

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=99.97  E-value=8.1e-31  Score=225.66  Aligned_cols=216  Identities=17%  Similarity=0.132  Sum_probs=165.8

Q ss_pred             eEEEEcCCChhHHHHHHHHHHC--CCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhc--CCCEEEEccccCC
Q 023205           58 KLLVLGGNGFVGSHICREALDR--GLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD--GVTAVISCVGGFG  133 (286)
Q Consensus        58 ~VlVtGatG~iG~~l~~~Ll~~--g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~--~~d~vi~~a~~~~  133 (286)
                      +||||||+||||++++++|+++  |++|++++|+..+.      .+++++.+|++|++.+.++++  ++|+|||+|+...
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~------~~~~~~~~D~~d~~~~~~~~~~~~~d~vih~a~~~~   74 (317)
T 3ajr_A            1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDT------GGIKFITLDVSNRDEIDRAVEKYSIDAIFHLAGILS   74 (317)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCC------TTCCEEECCTTCHHHHHHHHHHTTCCEEEECCCCCH
T ss_pred             CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCccc------cCceEEEecCCCHHHHHHHHhhcCCcEEEECCcccC
Confidence            5899999999999999999998  79999999986542      267899999999999999998  8999999998753


Q ss_pred             -----CcchhhhhhhHHHHHHHHHHHHcCCCEEEEEecC-CcCCCC-----------ccccchHHHHHHHHHHHHH---h
Q 023205          134 -----SNSYMYKINGTANINAIRAASEKGVKRFVYISAA-DFGVAN-----------YLLQGYYEGKRAAETELLT---R  193 (286)
Q Consensus       134 -----~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~-~~~~~~-----------~~~~~y~~sK~~~E~~~~~---~  193 (286)
                           ++...+++|+.++.+++++|++.++++|||+||. +|+...           .+.+.|+.+|..+|++++.   .
T Consensus        75 ~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~  154 (317)
T 3ajr_A           75 AKGEKDPALAYKVNMNGTYNILEAAKQHRVEKVVIPSTIGVFGPETPKNKVPSITITRPRTMFGVTKIAAELLGQYYYEK  154 (317)
T ss_dssp             HHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCTTSCSSSBCSSSCCCCCSHHHHHHHHHHHHHHHHHHH
T ss_pred             CccccChHHHhhhhhHHHHHHHHHHHHcCCCEEEEecCHHHhCCCCCCCCccccccCCCCchHHHHHHHHHHHHHHHHHh
Confidence                 3346778999999999999999999999999994 454321           2467899999999998764   4


Q ss_pred             CCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCC-CCCCCCCccCCCccHHHHHHHHHHHhcCCCC---C
Q 023205          194 YPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLS-QLPLVGPLFTPPVNVTVVAKVAVRAATDPVF---P  269 (286)
Q Consensus       194 ~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~i~v~Dva~~~~~~l~~~~~---~  269 (286)
                      .|++++++||+.+||+...+....    .......+........ .....++..+++++++|+|++++.+++.+..   .
T Consensus       155 ~~~~~~~lR~~~~~g~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~~~~~~  230 (317)
T 3ajr_A          155 FGLDVRSLRYPGIISYKAEPTAGT----TDYAVEIFYYAVKREKYKCYLAPNRALPMMYMPDALKALVDLYEADRDKLVL  230 (317)
T ss_dssp             HCCEEEEEEECEEECSSSCCCSCS----STHHHHHHHHHHTTCCEEECSCTTCCEEEEEHHHHHHHHHHHHHCCGGGCSS
T ss_pred             cCCeEEEEecCcEeccCCCCCCcc----hhHHHHHHHHHHhCCCceeecCccceeeeeEHHHHHHHHHHHHhCCcccccc
Confidence            689999999999999764321100    0112333333333222 1223345678999999999999999987642   2


Q ss_pred             CCeeEeccccccccc
Q 023205          270 PGIVDVHGILRYSQK  284 (286)
Q Consensus       270 ~~~~~l~~~~~~s~~  284 (286)
                      +++||+++ ..++++
T Consensus       231 g~~~~i~~-~~~s~~  244 (317)
T 3ajr_A          231 RNGYNVTA-YTFTPS  244 (317)
T ss_dssp             CSCEECCS-EEECHH
T ss_pred             CceEecCC-ccccHH
Confidence            58999987 456654

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=99.97  E-value=7.3e-31  Score=231.72  Aligned_cols=222  Identities=14%  Similarity=0.024  Sum_probs=168.3

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcc----ccccc------CC-ceeEEeccCCCHhHHHHHhcC--
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSS----LRDSW------AN-NVIWHQGNLLSSDSWKEALDG--  121 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~----~~~~~------~~-~~~~i~~Dl~d~~~~~~~~~~--  121 (286)
                      |+++||||||+||||++++++|+++|++|++++|+..+.    .....      .. +++++.+|++|.+.+.+++++  
T Consensus        27 M~k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~  106 (381)
T 1n7h_A           27 PRKIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIK  106 (381)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHC
T ss_pred             hCCeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHHHHHHhcC
Confidence            347999999999999999999999999999999986541    11110      12 789999999999999999986  


Q ss_pred             CCEEEEccccCC------CcchhhhhhhHHHHHHHHHHHHcCCC-----EEEEEecC-CcCCC---------CccccchH
Q 023205          122 VTAVISCVGGFG------SNSYMYKINGTANINAIRAASEKGVK-----RFVYISAA-DFGVA---------NYLLQGYY  180 (286)
Q Consensus       122 ~d~vi~~a~~~~------~~~~~~~~~~~~~~~l~~~a~~~~v~-----~~v~~Ss~-~~~~~---------~~~~~~y~  180 (286)
                      +|+|||+|+...      +....+++|+.++.+++++|++.+++     +|||+||. +|+..         ..+.+.|+
T Consensus       107 ~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~E~~~~~~~~~Y~  186 (381)
T 1n7h_A          107 PDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSETTPFHPRSPYA  186 (381)
T ss_dssp             CSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSBCTTSCCCCCSHHH
T ss_pred             CCEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcHHHhCCCCCCCCCCCCCCCCCchH
Confidence            599999999764      33456789999999999999988765     99999994 45532         23567899


Q ss_pred             HHHHHHHHHHHH---hCCCcEEEEeeCeeecCCCCCccccCccccCchHH-HHHHhcccCCCCC--CCCCccCCCccHHH
Q 023205          181 EGKRAAETELLT---RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPME-MVLQHAKPLSQLP--LVGPLFTPPVNVTV  254 (286)
Q Consensus       181 ~sK~~~E~~~~~---~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~--~~g~~~~~~i~v~D  254 (286)
                      .+|..+|.+++.   ..+++++++|++.+|||......      ....+. ++...........  ..++..++|++++|
T Consensus       187 ~sK~~~E~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~------~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~v~v~D  260 (381)
T 1n7h_A          187 ASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENF------VTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGD  260 (381)
T ss_dssp             HHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTS------HHHHHHHHHHHHHHTSCCCEEESCTTCEEECEEHHH
T ss_pred             HHHHHHHHHHHHHHHHhCCcEEEEEeCceeCCCCCCcc------hhHHHHHHHHHHHcCCCCeEEeCCCCceeeeEEHHH
Confidence            999999998865   35899999999999999753221      001111 1222222211221  22455789999999


Q ss_pred             HHHHHHHHhcCCCCCCCeeEeccccccccc
Q 023205          255 VAKVAVRAATDPVFPPGIVDVHGILRYSQK  284 (286)
Q Consensus       255 va~~~~~~l~~~~~~~~~~~l~~~~~~s~~  284 (286)
                      +|++++.+++.+.  +++||+++++.++++
T Consensus       261 va~a~~~~~~~~~--~~~~~i~~~~~~s~~  288 (381)
T 1n7h_A          261 YVEAMWLMLQQEK--PDDYVVATEEGHTVE  288 (381)
T ss_dssp             HHHHHHHHHTSSS--CCEEEECCSCEEEHH
T ss_pred             HHHHHHHHHhCCC--CCeEEeeCCCCCcHH
Confidence            9999999998765  589999999988875

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.97  E-value=8.9e-32  Score=218.92  Aligned_cols=202  Identities=17%  Similarity=0.154  Sum_probs=162.4

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCC--eEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccccC
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGL--TVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGF  132 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~--~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~~  132 (286)
                      ++|+|+||||+|+||++++++|+++|+  +|++++|++.+     ..++++++.+|+.|++++.+++  +|+|||+++..
T Consensus         4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~-----~~~~~~~~~~D~~~~~~~~~~~--~d~vi~~a~~~   76 (215)
T 2a35_A            4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA-----EHPRLDNPVGPLAELLPQLDGS--IDTAFCCLGTT   76 (215)
T ss_dssp             CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC-----CCTTEECCBSCHHHHGGGCCSC--CSEEEECCCCC
T ss_pred             CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc-----cCCCceEEeccccCHHHHHHhh--hcEEEECeeec
Confidence            457999999999999999999999998  99999998765     2357889999999999888888  99999999875


Q ss_pred             C----CcchhhhhhhHHHHHHHHHHHHcCCCEEEEEecCCcCCCCccccchHHHHHHHHHHHHHhCCCc-EEEEeeCeee
Q 023205          133 G----SNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLTRYPYG-GVILRPGFIY  207 (286)
Q Consensus       133 ~----~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~~~~g~~-~~ilRp~~v~  207 (286)
                      .    .....+++|+.++.++++++++.++++||++||...  ...+...|+.+|..+|+++++ .+++ ++++||+.+|
T Consensus        77 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~--~~~~~~~y~~sK~~~e~~~~~-~~~~~~~~vrp~~v~  153 (215)
T 2a35_A           77 IKEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGA--DAKSSIFYNRVKGELEQALQE-QGWPQLTIARPSLLF  153 (215)
T ss_dssp             HHHHSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTC--CTTCSSHHHHHHHHHHHHHTT-SCCSEEEEEECCSEE
T ss_pred             cccCCCHHHHHHhhHHHHHHHHHHHHHcCCCEEEEECCccc--CCCCccHHHHHHHHHHHHHHH-cCCCeEEEEeCceee
Confidence            3    345677899999999999999999999999999532  123567899999999997766 7899 9999999999


Q ss_pred             cCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcCCCCCCCeeEeccccccccc
Q 023205          208 GTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDPVFPPGIVDVHGILRYSQK  284 (286)
Q Consensus       208 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~l~~~~~~s~~  284 (286)
                      |+.....+          .+.+.   .  ...+. +++..++++++|+|++++.+++++.  +++||+++++.+++.
T Consensus       154 g~~~~~~~----------~~~~~---~--~~~~~-~~~~~~~i~~~Dva~~~~~~~~~~~--~~~~~i~~~~~~~~~  212 (215)
T 2a35_A          154 GPREEFRL----------AEILA---A--PIARI-LPGKYHGIEACDLARALWRLALEEG--KGVRFVESDELRKLG  212 (215)
T ss_dssp             STTSCEEG----------GGGTT---C--CCC-----CHHHHHHHHHHHHHHHHHHTCCC--SEEEEEEHHHHHHHH
T ss_pred             CCCCcchH----------HHHHH---H--hhhhc-cCCCcCcEeHHHHHHHHHHHHhcCC--CCceEEcHHHHHHhh
Confidence            98754211          11010   1  11222 2336689999999999999998876  889999999887764

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.97  E-value=2.2e-30  Score=215.54  Aligned_cols=210  Identities=20%  Similarity=0.147  Sum_probs=161.6

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHC--CCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccccC
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDR--GLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGF  132 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~--g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~~  132 (286)
                      ++|+|+||||+|+||++++++|+++  |++|++++|++++.. . ...+++++.+|++|++++.++++++|+|||+|+..
T Consensus         3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~-~-~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~~~   80 (253)
T 1xq6_A            3 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKE-K-IGGEADVFIGDITDADSINPAFQGIDALVILTSAV   80 (253)
T ss_dssp             SCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHH-H-TTCCTTEEECCTTSHHHHHHHHTTCSEEEECCCCC
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchh-h-cCCCeeEEEecCCCHHHHHHHHcCCCEEEEecccc
Confidence            3679999999999999999999999  899999999864421 1 14578899999999999999999999999999864


Q ss_pred             CC------------cc-------hhhhhhhHHHHHHHHHHHHcCCCEEEEEecCCcCCCCccc-----cchHHHHHHHHH
Q 023205          133 GS------------NS-------YMYKINGTANINAIRAASEKGVKRFVYISAADFGVANYLL-----QGYYEGKRAAET  188 (286)
Q Consensus       133 ~~------------~~-------~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~~~~~~~~~~-----~~y~~sK~~~E~  188 (286)
                      ..            +.       ..+++|+.++.++++++++.++++||++||........+.     ..|+.+|..+|.
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~y~~sK~~~e~  160 (253)
T 1xq6_A           81 PKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNPDHPLNKLGNGNILVWKRKAEQ  160 (253)
T ss_dssp             CEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTTCTTCGGGGGGGCCHHHHHHHHHH
T ss_pred             ccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcCCCEEEEEcCccCCCCCCccccccchhHHHHHHHHHH
Confidence            31            11       2468999999999999999999999999996432222232     346679999999


Q ss_pred             HHHHhCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcCCCC
Q 023205          189 ELLTRYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDPVF  268 (286)
Q Consensus       189 ~~~~~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~~~  268 (286)
                      ++++ .|++++++||+.++|+........                ... ..+..+ ...++++++|+|++++.+++++..
T Consensus       161 ~~~~-~~i~~~~vrpg~v~~~~~~~~~~~----------------~~~-~~~~~~-~~~~~~~~~Dva~~~~~~~~~~~~  221 (253)
T 1xq6_A          161 YLAD-SGTPYTIIRAGGLLDKEGGVRELL----------------VGK-DDELLQ-TDTKTVPRADVAEVCIQALLFEEA  221 (253)
T ss_dssp             HHHT-SSSCEEEEEECEEECSCSSSSCEE----------------EES-TTGGGG-SSCCEEEHHHHHHHHHHHTTCGGG
T ss_pred             HHHh-CCCceEEEecceeecCCcchhhhh----------------ccC-CcCCcC-CCCcEEcHHHHHHHHHHHHcCccc
Confidence            8765 899999999999999864311000                000 001111 235689999999999999998776


Q ss_pred             CCCeeEecccc---cccccC
Q 023205          269 PPGIVDVHGIL---RYSQKS  285 (286)
Q Consensus       269 ~~~~~~l~~~~---~~s~~~  285 (286)
                      .+++||+.+++   .++++.
T Consensus       222 ~g~~~~i~~~~~~~~~s~~e  241 (253)
T 1xq6_A          222 KNKAFDLGSKPEGTSTPTKD  241 (253)
T ss_dssp             TTEEEEEEECCTTTSCCCCC
T ss_pred             cCCEEEecCCCcCCCCCHHH
Confidence            68899999975   477653

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=99.97  E-value=6e-31  Score=231.37  Aligned_cols=196  Identities=14%  Similarity=0.091  Sum_probs=163.7

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccccCC--
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFG--  133 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~~~--  133 (286)
                      |+|||||||||||++++++|+++|+ +|++++|+                    .|++++.++++++|+|||+|+...  
T Consensus         1 M~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~--------------------~d~~~l~~~~~~~d~Vih~a~~~~~~   60 (369)
T 3st7_A            1 MNIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ--------------------TKEEELESALLKADFIVHLAGVNRPE   60 (369)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT--------------------CCHHHHHHHHHHCSEEEECCCSBCTT
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC--------------------CCHHHHHHHhccCCEEEECCcCCCCC
Confidence            5899999999999999999999998 88877664                    678999999999999999999764  


Q ss_pred             CcchhhhhhhHHHHHHHHHHHHcCCC-EEEEEecC-CcCCCCccccchHHHHHHHHHHHHH---hCCCcEEEEeeCeeec
Q 023205          134 SNSYMYKINGTANINAIRAASEKGVK-RFVYISAA-DFGVANYLLQGYYEGKRAAETELLT---RYPYGGVILRPGFIYG  208 (286)
Q Consensus       134 ~~~~~~~~~~~~~~~l~~~a~~~~v~-~~v~~Ss~-~~~~~~~~~~~y~~sK~~~E~~~~~---~~g~~~~ilRp~~v~g  208 (286)
                      .+...++.|+.++.+++++|++.+++ +|||+||. .++     .+.|+.+|..+|+++++   ..|++++++||+++||
T Consensus        61 ~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~Ss~~~~~-----~~~Y~~sK~~~E~~~~~~~~~~g~~~~i~R~~~v~G  135 (369)
T 3st7_A           61 HDKEFSLGNVSYLDHVLDILTRNTKKPAILLSSSIQATQ-----DNPYGESKLQGEQLLREYAEEYGNTVYIYRWPNLFG  135 (369)
T ss_dssp             CSTTCSSSCCBHHHHHHHHHTTCSSCCEEEEEEEGGGGS-----CSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEEC
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCchhhcC-----CCCchHHHHHHHHHHHHHHHHhCCCEEEEECCceeC
Confidence            34567789999999999999999987 99999995 333     67899999999998875   4689999999999999


Q ss_pred             CCCCCccccCccccCchHHHHHHhcccCCCCCCC-CCccCCCccHHHHHHHHHHHhcCCCCC-CCeeEeccccccccc
Q 023205          209 TRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLV-GPLFTPPVNVTVVAKVAVRAATDPVFP-PGIVDVHGILRYSQK  284 (286)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~i~v~Dva~~~~~~l~~~~~~-~~~~~l~~~~~~s~~  284 (286)
                      +...+.+       ..++..+.........+.+. ++..+++++++|+|++++.+++.+... +++||+++++.++|.
T Consensus       136 ~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~~i~~~~~~s~~  206 (369)
T 3st7_A          136 KWCKPNY-------NSVIATFCYKIARNEEIQVNDRNVELTLNYVDDIVAEIKRAIEGTPTIENGVPTVPNVFKVTLG  206 (369)
T ss_dssp             TTCCTTS-------SCHHHHHHHHHHTTCCCCCSCTTCEEEEEEHHHHHHHHHHHHHTCCCEETTEECCSCCEEEEHH
T ss_pred             CCCCCCc-------chHHHHHHHHHHcCCCeEecCCCeEEEEEEHHHHHHHHHHHHhCCcccCCceEEeCCCCceeHH
Confidence            9775432       34555565555555555543 566789999999999999999987764 799999999998875

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=99.97  E-value=6e-31  Score=228.59  Aligned_cols=223  Identities=18%  Similarity=0.171  Sum_probs=164.9

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc--c----ccCCceeEE-eccCCCHhHHHHHhcCCCEEEE
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--D----SWANNVIWH-QGNLLSSDSWKEALDGVTAVIS  127 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~--~----~~~~~~~~i-~~Dl~d~~~~~~~~~~~d~vi~  127 (286)
                      ++|+||||||+||||++++++|+++|++|++++|+.++...  .    ....+++++ .+|++|.+.+.++++++|+|||
T Consensus        10 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih   89 (342)
T 1y1p_A           10 EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGVAH   89 (342)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEEEE
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHcCCCEEEE
Confidence            35799999999999999999999999999999997543211  0    012578888 8999999999999999999999


Q ss_pred             ccccCC---CcchhhhhhhHHHHHHHHHHHH-cCCCEEEEEecC-CcCCC------------------------------
Q 023205          128 CVGGFG---SNSYMYKINGTANINAIRAASE-KGVKRFVYISAA-DFGVA------------------------------  172 (286)
Q Consensus       128 ~a~~~~---~~~~~~~~~~~~~~~l~~~a~~-~~v~~~v~~Ss~-~~~~~------------------------------  172 (286)
                      +|+...   ++...+++|+.++.+++++|.+ .++++|||+||. .|+..                              
T Consensus        90 ~A~~~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~~  169 (342)
T 1y1p_A           90 IASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDP  169 (342)
T ss_dssp             CCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHHSCTTST
T ss_pred             eCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHHHhcCCCCCCCCcccCccccCchhhhhhcccccccc
Confidence            999764   3456778999999999999985 678999999995 44321                              


Q ss_pred             CccccchHHHHHHHHHHHHH---h--CCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCC-cc
Q 023205          173 NYLLQGYYEGKRAAETELLT---R--YPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGP-LF  246 (286)
Q Consensus       173 ~~~~~~y~~sK~~~E~~~~~---~--~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~  246 (286)
                      ..+.+.|+.+|..+|++++.   .  .+++++++||+.+||+.......      +.....+.............++ ..
T Consensus       170 ~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~rp~~v~g~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~  243 (342)
T 1y1p_A          170 QKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQ------SGSTSGWMMSLFNGEVSPALALMPP  243 (342)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTC------CCHHHHHHHHHHTTCCCHHHHTCCS
T ss_pred             ccchHHHHHHHHHHHHHHHHHHHhcCCCceEEEEcCCceECCCCCCCCC------CccHHHHHHHHHcCCCccccccCCc
Confidence            12346899999999998864   1  37899999999999997643210      1123333333333333332222 46


Q ss_pred             CCCccHHHHHHHHHHHhcCCCCCCCeeEeccccccccc
Q 023205          247 TPPVNVTVVAKVAVRAATDPVFPPGIVDVHGILRYSQK  284 (286)
Q Consensus       247 ~~~i~v~Dva~~~~~~l~~~~~~~~~~~l~~~~~~s~~  284 (286)
                      .++++++|+|++++.+++.+...++.+... +..+|++
T Consensus       244 ~~~v~v~Dva~a~~~~~~~~~~~g~~~~~~-g~~~s~~  280 (342)
T 1y1p_A          244 QYYVSAVDIGLLHLGCLVLPQIERRRVYGT-AGTFDWN  280 (342)
T ss_dssp             EEEEEHHHHHHHHHHHHHCTTCCSCEEEEC-CEEECHH
T ss_pred             CCEeEHHHHHHHHHHHHcCcccCCceEEEe-CCCCCHH
Confidence            789999999999999998765545555443 4556654

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=99.97  E-value=2.8e-30  Score=227.09  Aligned_cols=221  Identities=15%  Similarity=0.075  Sum_probs=165.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcc----cccc------cCCceeEEeccCCCHhHHHHHhcC--CC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSS----LRDS------WANNVIWHQGNLLSSDSWKEALDG--VT  123 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~----~~~~------~~~~~~~i~~Dl~d~~~~~~~~~~--~d  123 (286)
                      ||+||||||+||||++++++|+++|++|++++|+....    ....      ...+++++.+|++|.+++.+++++  +|
T Consensus         1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d   80 (372)
T 1db3_A            1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPD   80 (372)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCS
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhcCCC
Confidence            47899999999999999999999999999999986531    1111      124789999999999999999986  69


Q ss_pred             EEEEccccCCC------cchhhhhhhHHHHHHHHHHHHcCC---CEEEEEecC-CcCCCC----------ccccchHHHH
Q 023205          124 AVISCVGGFGS------NSYMYKINGTANINAIRAASEKGV---KRFVYISAA-DFGVAN----------YLLQGYYEGK  183 (286)
Q Consensus       124 ~vi~~a~~~~~------~~~~~~~~~~~~~~l~~~a~~~~v---~~~v~~Ss~-~~~~~~----------~~~~~y~~sK  183 (286)
                      +|||+|+....      ....+++|+.++.+++++|++.++   ++||++||. +|+...          .+.+.|+.+|
T Consensus        81 ~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~SS~~v~g~~~~~~~~E~~~~~~~~~Y~~sK  160 (372)
T 1db3_A           81 EVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAK  160 (372)
T ss_dssp             EEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCTTSCCCCCSHHHHHH
T ss_pred             EEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCChhhhCCCCCCCCCccCCCCCCChHHHHH
Confidence            99999987532      235668999999999999999988   799999994 454321          3467899999


Q ss_pred             HHHHHHHHH---hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCC-CCC--CCCCccCCCccHHHHHH
Q 023205          184 RAAETELLT---RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLS-QLP--LVGPLFTPPVNVTVVAK  257 (286)
Q Consensus       184 ~~~E~~~~~---~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~g~~~~~~i~v~Dva~  257 (286)
                      ..+|.+++.   ..+++++++|+..+|||......      ....+..+........ ...  ..++..++|++++|+|+
T Consensus       161 ~~~e~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~------~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dva~  234 (372)
T 1db3_A          161 LYAYWITVNYRESYGMYACNGILFNHESPRRGETF------VTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVK  234 (372)
T ss_dssp             HHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTS------HHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCCeEEEEECCccCCCCCCcc------hhhHHHHHHHHHHcCCCCceeecCCCceeeeeEHHHHHH
Confidence            999998864   46899999999999999753221      0111222222222222 221  23456789999999999


Q ss_pred             HHHHHhcCCCCCCCeeEeccccccccc
Q 023205          258 VAVRAATDPVFPPGIVDVHGILRYSQK  284 (286)
Q Consensus       258 ~~~~~l~~~~~~~~~~~l~~~~~~s~~  284 (286)
                      +++.+++++.  +++||+++++.++++
T Consensus       235 a~~~~~~~~~--~~~~ni~~~~~~s~~  259 (372)
T 1db3_A          235 MQWMMLQQEQ--PEDFVIATGVQYSVR  259 (372)
T ss_dssp             HHHHTTSSSS--CCCEEECCCCCEEHH
T ss_pred             HHHHHHhcCC--CceEEEcCCCceeHH
Confidence            9999998765  589999999988875

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=99.97  E-value=5.7e-31  Score=221.41  Aligned_cols=196  Identities=17%  Similarity=0.066  Sum_probs=161.1

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccccCC-
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFG-  133 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~~~-  133 (286)
                      ||++||||||||+||++++++|+++|++|++++|+..+..    ..+++++.+|++|++.+.++++++|+|||+|+... 
T Consensus         1 M~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~----~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~~~~   76 (267)
T 3ay3_A            1 MLNRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAA----EAHEEIVACDLADAQAVHDLVKDCDGIIHLGGVSVE   76 (267)
T ss_dssp             CEEEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCC----CTTEEECCCCTTCHHHHHHHHTTCSEEEECCSCCSC
T ss_pred             CCceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCcccc----CCCccEEEccCCCHHHHHHHHcCCCEEEECCcCCCC
Confidence            3578999999999999999999999999999999875422    24789999999999999999999999999998753 


Q ss_pred             -CcchhhhhhhHHHHHHHHHHHHcCCCEEEEEecC-CcCCCC-----------ccccchHHHHHHHHHHHHH---hCCCc
Q 023205          134 -SNSYMYKINGTANINAIRAASEKGVKRFVYISAA-DFGVAN-----------YLLQGYYEGKRAAETELLT---RYPYG  197 (286)
Q Consensus       134 -~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~-~~~~~~-----------~~~~~y~~sK~~~E~~~~~---~~g~~  197 (286)
                       .....+++|+.++.++++++++.++++|||+||. +|+...           .+...|+.+|..+|.+++.   ..|++
T Consensus        77 ~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~  156 (267)
T 3ay3_A           77 RPWNDILQANIIGAYNLYEAARNLGKPRIVFASSNHTIGYYPRTTRIDTEVPRRPDSLYGLSKCFGEDLASLYYHKFDIE  156 (267)
T ss_dssp             CCHHHHHHHTHHHHHHHHHHHHHTTCCEEEEEEEGGGSTTSBTTSCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCHHHhCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHcCCC
Confidence             3346778999999999999999999999999994 444321           1457899999999998764   57999


Q ss_pred             EEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcCCCCCCCeeEecc
Q 023205          198 GVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDPVFPPGIVDVHG  277 (286)
Q Consensus       198 ~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~l~~  277 (286)
                      ++++||+.+|+...                              .++...+|++++|+|++++.+++.+...+++|++.+
T Consensus       157 ~~~lrp~~v~~~~~------------------------------~~~~~~~~~~~~dva~~~~~~~~~~~~~~~~~~~~~  206 (267)
T 3ay3_A          157 TLNIRIGSCFPKPK------------------------------DARMMATWLSVDDFMRLMKRAFVAPKLGCTVVYGAS  206 (267)
T ss_dssp             EEEEEECBCSSSCC------------------------------SHHHHHHBCCHHHHHHHHHHHHHSSCCCEEEEEECC
T ss_pred             EEEEeceeecCCCC------------------------------CCCeeeccccHHHHHHHHHHHHhCCCCCceeEecCC
Confidence            99999999984210                              011235689999999999999988766567899988


Q ss_pred             ccccccc
Q 023205          278 ILRYSQK  284 (286)
Q Consensus       278 ~~~~s~~  284 (286)
                      +...+|.
T Consensus       207 ~~~~~~~  213 (267)
T 3ay3_A          207 ANTESWW  213 (267)
T ss_dssp             SCSSCCB
T ss_pred             Ccccccc
Confidence            8766653

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=99.97  E-value=6.3e-31  Score=223.07  Aligned_cols=200  Identities=16%  Similarity=0.136  Sum_probs=154.8

Q ss_pred             eEEEEcCCChhHHHHHHHHHHC--CCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccccCCCc
Q 023205           58 KLLVLGGNGFVGSHICREALDR--GLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFGSN  135 (286)
Q Consensus        58 ~VlVtGatG~iG~~l~~~Ll~~--g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~~~~~  135 (286)
                      +||||||||+||++++++|+++  |++|++++|++++.. .....+++++.+|++|++++.++++++|+|||+|+...  
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~~~~--   77 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQ-ALAAQGITVRQADYGDEAALTSALQGVEKLLLISSSEV--   77 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCH-HHHHTTCEEEECCTTCHHHHHHHTTTCSEEEECC------
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhh-hhhcCCCeEEEcCCCCHHHHHHHHhCCCEEEEeCCCCc--
Confidence            5899999999999999999998  999999999876522 11235789999999999999999999999999998631  


Q ss_pred             chhhhhhhHHHHHHHHHHHHcCCCEEEEEecCCcCCCCccccchHHHHHHHHHHHHHhCCCcEEEEeeCeeecCCCCCcc
Q 023205          136 SYMYKINGTANINAIRAASEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLTRYPYGGVILRPGFIYGTRTVGGM  215 (286)
Q Consensus       136 ~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~~~~g~~~~ilRp~~v~g~~~~~~~  215 (286)
                          ..++.++.+++++|++.++++||++||....   .....|+.+|..+|+++++ .|++++++||+.++++..    
T Consensus        78 ----~~~~~~~~~l~~a~~~~~~~~~v~~Ss~~~~---~~~~~y~~sK~~~e~~~~~-~~~~~~ilrp~~~~~~~~----  145 (286)
T 2zcu_A           78 ----GQRAPQHRNVINAAKAAGVKFIAYTSLLHAD---TSPLGLADEHIETEKMLAD-SGIVYTLLRNGWYSENYL----  145 (286)
T ss_dssp             --------CHHHHHHHHHHHHTCCEEEEEEETTTT---TCCSTTHHHHHHHHHHHHH-HCSEEEEEEECCBHHHHH----
T ss_pred             ----hHHHHHHHHHHHHHHHcCCCEEEEECCCCCC---CCcchhHHHHHHHHHHHHH-cCCCeEEEeChHHhhhhH----
Confidence                2467899999999999999999999995322   2235799999999998876 789999999988765421    


Q ss_pred             ccCccccCchHHHHHHhcccCCCCC-CCCCccCCCccHHHHHHHHHHHhcCCCCCCCeeEeccccccccc
Q 023205          216 KLPLGVIGSPMEMVLQHAKPLSQLP-LVGPLFTPPVNVTVVAKVAVRAATDPVFPPGIVDVHGILRYSQK  284 (286)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~l~~~~~~s~~  284 (286)
                             ..+...+..     +.++ ..++...++++++|+|++++.++.++...+++||+++++.+|++
T Consensus       146 -------~~~~~~~~~-----~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~~~~~s~~  203 (286)
T 2zcu_A          146 -------ASAPAALEH-----GVFIGAAGDGKIASATRADYAAAAARVISEAGHEGKVYELAGDSAWTLT  203 (286)
T ss_dssp             -------TTHHHHHHH-----TEEEESCTTCCBCCBCHHHHHHHHHHHHHSSSCTTCEEEECCSSCBCHH
T ss_pred             -------HHhHHhhcC-----CceeccCCCCccccccHHHHHHHHHHHhcCCCCCCceEEEeCCCcCCHH
Confidence                   111111111     1122 23466889999999999999999887666899999999888875

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=99.97  E-value=2e-30  Score=244.05  Aligned_cols=228  Identities=15%  Similarity=0.148  Sum_probs=171.4

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHC-CCeEEEEecCCCcccccccCCceeEEeccCCCHhH-HHHHhcCCCEEEEccccC
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDR-GLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDS-WKEALDGVTAVISCVGGF  132 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~-g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~-~~~~~~~~d~vi~~a~~~  132 (286)
                      ++|+|||||||||||++++++|+++ |++|++++|+..+........+++++.+|++|.++ +.++++++|+|||+|+..
T Consensus       314 ~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~D~Vih~Aa~~  393 (660)
T 1z7e_A          314 RRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIA  393 (660)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGGTTCTTEEEEECCTTTCHHHHHHHHHHCSEEEECCCCC
T ss_pred             cCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhhccCCceEEEECCCCCcHHHHHHhhcCCCEEEECceec
Confidence            4678999999999999999999998 89999999987653222224589999999999765 788899999999999875


Q ss_pred             C------CcchhhhhhhHHHHHHHHHHHHcCCCEEEEEecC-CcCCCC-----------------ccccchHHHHHHHHH
Q 023205          133 G------SNSYMYKINGTANINAIRAASEKGVKRFVYISAA-DFGVAN-----------------YLLQGYYEGKRAAET  188 (286)
Q Consensus       133 ~------~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~-~~~~~~-----------------~~~~~y~~sK~~~E~  188 (286)
                      .      ++...+++|+.++.+++++|++.+ ++|||+||. +|+...                 .+.+.|+.+|..+|+
T Consensus       394 ~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~-~r~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~~~Y~~sK~~~E~  472 (660)
T 1z7e_A          394 TPIEYTRNPLRVFELDFEENLRIIRYCVKYR-KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDR  472 (660)
T ss_dssp             CTHHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CEEEEECCGGGGBTCCSSSBCTTTCCEEECCTTCTTHHHHHHHHHHHH
T ss_pred             CccccccCHHHHHHhhhHHHHHHHHHHHHhC-CEEEEEecHHHcCCCCCcccCCCccccccCcccCCCCCcHHHHHHHHH
Confidence            4      234567899999999999999988 899999994 443221                 223479999999999


Q ss_pred             HHHH---hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCC--CCccCCCccHHHHHHHHHHHh
Q 023205          189 ELLT---RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLV--GPLFTPPVNVTVVAKVAVRAA  263 (286)
Q Consensus       189 ~~~~---~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~i~v~Dva~~~~~~l  263 (286)
                      +++.   ..|++++++||+.+||+.......... .....+..+........++...  ++..++|++++|+|++++.++
T Consensus       473 ~~~~~~~~~gi~~~ilRpg~v~Gp~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~ai~~~l  551 (660)
T 1z7e_A          473 VIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARI-GSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRII  551 (660)
T ss_dssp             HHHHHHHHHCCCEEEEEECSEESTTSSCHHHHTT-TCSCHHHHHHHHHHHTCCEEEEGGGCCEEECEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHcCCCEEEECCCcccCCCccccccccc-cccchHHHHHHHHHcCCCcEEeCCCCeEEEEEEHHHHHHHHHHHH
Confidence            8864   468999999999999997642100000 0012233333333333344333  456789999999999999999


Q ss_pred             cCCC--CCCCeeEecccc-ccccc
Q 023205          264 TDPV--FPPGIVDVHGIL-RYSQK  284 (286)
Q Consensus       264 ~~~~--~~~~~~~l~~~~-~~s~~  284 (286)
                      +.+.  ..+++||+++++ .++++
T Consensus       552 ~~~~~~~~g~~~ni~~~~~~~s~~  575 (660)
T 1z7e_A          552 ENAGNRCDGEIINIGNPENEASIE  575 (660)
T ss_dssp             HCGGGTTTTEEEEECCGGGEEEHH
T ss_pred             hCccccCCCeEEEECCCCCCcCHH
Confidence            8764  457899999986 77765

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=99.97  E-value=2.8e-30  Score=224.61  Aligned_cols=221  Identities=11%  Similarity=-0.014  Sum_probs=168.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc----cc-cCCceeEEeccCCCHhHHHHHhcC--CCEEEEc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR----DS-WANNVIWHQGNLLSSDSWKEALDG--VTAVISC  128 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~----~~-~~~~~~~i~~Dl~d~~~~~~~~~~--~d~vi~~  128 (286)
                      +|+||||||+||||++++++|+++|++|++++|+.++...    .. ...+++++.+|++|++++.+++++  +|+|||+
T Consensus         3 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~   82 (345)
T 2z1m_A            3 GKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLKELGIENDVKIIHMDLLEFSNIIRTIEKVQPDEVYNL   82 (345)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTTHHHHHTTCTTTEEECCCCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccccccHhhccccCceeEEECCCCCHHHHHHHHHhcCCCEEEEC
Confidence            4689999999999999999999999999999998754211    11 124789999999999999999986  5999999


Q ss_pred             cccCC------CcchhhhhhhHHHHHHHHHHHHcCC-CEEEEEecC-CcCCC----------CccccchHHHHHHHHHHH
Q 023205          129 VGGFG------SNSYMYKINGTANINAIRAASEKGV-KRFVYISAA-DFGVA----------NYLLQGYYEGKRAAETEL  190 (286)
Q Consensus       129 a~~~~------~~~~~~~~~~~~~~~l~~~a~~~~v-~~~v~~Ss~-~~~~~----------~~~~~~y~~sK~~~E~~~  190 (286)
                      |+...      +....+++|+.++.+++++|.+.++ ++|||+||. +||..          ..+.+.|+.+|..+|.++
T Consensus        83 A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~  162 (345)
T 2z1m_A           83 AAQSFVGVSFEQPILTAEVDAIGVLRILEALRTVKPDTKFYQASTSEMFGKVQEIPQTEKTPFYPRSPYAVAKLFGHWIT  162 (345)
T ss_dssp             CCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHH
T ss_pred             CCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCCCCCCCccCCCCCCChhHHHHHHHHHHH
Confidence            99753      3456778999999999999998887 899999994 45431          234578999999999987


Q ss_pred             HH---hCCCcEEEEeeCeeecCCCCCccccCccccCchHH-HHHHhcccCCCC--CCCCCccCCCccHHHHHHHHHHHhc
Q 023205          191 LT---RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPME-MVLQHAKPLSQL--PLVGPLFTPPVNVTVVAKVAVRAAT  264 (286)
Q Consensus       191 ~~---~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~g~~~~~~i~v~Dva~~~~~~l~  264 (286)
                      +.   ..+++++++|+..+|||+.....      +...+. .+..........  ...++..+++++++|+|++++.+++
T Consensus       163 ~~~~~~~~~~~~~~r~~~~~gpg~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~a~~~~~~  236 (345)
T 2z1m_A          163 VNYREAYNMFACSGILFNHESPLRGIEF------VTRKITYSLARIKYGLQDKLVLGNLNAKRDWGYAPEYVEAMWLMMQ  236 (345)
T ss_dssp             HHHHHHHCCCEEEEEECCEECTTSCTTS------HHHHHHHHHHHHHTTSCSCEEESCTTCEECCEEHHHHHHHHHHHHT
T ss_pred             HHHHHHhCCceEeeeeeeecCCCCCCcc------hhHHHHHHHHHHHcCCCCeeeeCCCCceeeeEEHHHHHHHHHHHHh
Confidence            65   35899999999999999753221      001111 121212221111  1223457789999999999999998


Q ss_pred             CCCCCCCeeEeccccccccc
Q 023205          265 DPVFPPGIVDVHGILRYSQK  284 (286)
Q Consensus       265 ~~~~~~~~~~l~~~~~~s~~  284 (286)
                      ++.  +++||+++++.++++
T Consensus       237 ~~~--~~~~~i~~~~~~s~~  254 (345)
T 2z1m_A          237 QPE--PDDYVIATGETHTVR  254 (345)
T ss_dssp             SSS--CCCEEECCSCCEEHH
T ss_pred             CCC--CceEEEeCCCCccHH
Confidence            765  579999999988875

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=99.97  E-value=2.8e-30  Score=222.66  Aligned_cols=217  Identities=20%  Similarity=0.246  Sum_probs=155.8

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCeEEEEec-CCCcc--cc--ccc---CCceeEEeccCCCHhHHHHHhcCCCEEEEc
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSR-SGRSS--LR--DSW---ANNVIWHQGNLLSSDSWKEALDGVTAVISC  128 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R-~~~~~--~~--~~~---~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~  128 (286)
                      ++|||||||||||++++++|+++|++|++++| +++..  ..  ...   ..+++++.+|++|++.+.++++++|+|||+
T Consensus         2 k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~   81 (322)
T 2p4h_X            2 GRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNADLSNPDSFAAAIEGCVGIFHT   81 (322)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCCHHHHTSTTHHHHEEECCCCTTCGGGGHHHHTTCSEEEEC
T ss_pred             CEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHHHHHHhhhccCCceEEEecCCCCHHHHHHHHcCCCEEEEc
Confidence            68999999999999999999999999999998 54321  10  011   125789999999999999999999999999


Q ss_pred             cccCCC-----cchhhhhhhHHHHHHHHHHHHc-CCCEEEEEecCC--cCCCCc-------------------ccc-chH
Q 023205          129 VGGFGS-----NSYMYKINGTANINAIRAASEK-GVKRFVYISAAD--FGVANY-------------------LLQ-GYY  180 (286)
Q Consensus       129 a~~~~~-----~~~~~~~~~~~~~~l~~~a~~~-~v~~~v~~Ss~~--~~~~~~-------------------~~~-~y~  180 (286)
                      |++...     ....+++|+.++.+++++|++. ++++|||+||..  ++....                   +.. .|+
T Consensus        82 A~~~~~~~~~~~~~~~~~nv~gt~~l~~aa~~~~~~~~iV~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~p~~~~Y~  161 (322)
T 2p4h_X           82 ASPIDFAVSEPEEIVTKRTVDGALGILKACVNSKTVKRFIYTSSGSAVSFNGKDKDVLDESDWSDVDLLRSVKPFGWNYA  161 (322)
T ss_dssp             CCCC--------CHHHHHHHHHHHHHHHHHTTCSSCCEEEEEEEGGGTSCSSSCCSEECTTCCCCHHHHHHHCCTTHHHH
T ss_pred             CCcccCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccHHHcccCCCCCeecCCccccchhhhcccCcccccHH
Confidence            986521     1237889999999999999988 789999999953  222110                   111 699


Q ss_pred             HHHHHHHHHHHH---hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHH
Q 023205          181 EGKRAAETELLT---RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAK  257 (286)
Q Consensus       181 ~sK~~~E~~~~~---~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~  257 (286)
                      .+|..+|+++++   ..|++++++||+.+|||......       ......+..... ...... ++...++++++|+|+
T Consensus       162 ~sK~~~e~~~~~~~~~~gi~~~~lrp~~v~g~~~~~~~-------~~~~~~~~~~~~-g~~~~~-~~~~~~~i~v~Dva~  232 (322)
T 2p4h_X          162 VSKTLAEKAVLEFGEQNGIDVVTLILPFIVGRFVCPKL-------PDSIEKALVLVL-GKKEQI-GVTRFHMVHVDDVAR  232 (322)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCEEEEEECEEESCCCSSSC-------CHHHHHHTHHHH-SCGGGC-CEEEEEEEEHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcCCcEEEEcCCceECCCCCCCC-------CchHHHHHHHHh-CCCccC-cCCCcCEEEHHHHHH
Confidence            999999998765   47999999999999999754221       111111111111 111111 123347999999999


Q ss_pred             HHHHHhcCCCCCCCeeEeccccccccc
Q 023205          258 VAVRAATDPVFPPGIVDVHGILRYSQK  284 (286)
Q Consensus       258 ~~~~~l~~~~~~~~~~~l~~~~~~s~~  284 (286)
                      +++.+++.+...+ .|+ .+++.++++
T Consensus       233 a~~~~~~~~~~~g-~~~-~~~~~~s~~  257 (322)
T 2p4h_X          233 AHIYLLENSVPGG-RYN-CSPFIVPIE  257 (322)
T ss_dssp             HHHHHHHSCCCCE-EEE-CCCEEEEHH
T ss_pred             HHHHHhhCcCCCC-CEE-EcCCCCCHH
Confidence            9999998765434 588 556677764

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=99.97  E-value=6.8e-30  Score=222.20  Aligned_cols=222  Identities=15%  Similarity=0.132  Sum_probs=168.1

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCC-------CeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhc-CCCEEE
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRG-------LTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD-GVTAVI  126 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g-------~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~-~~d~vi  126 (286)
                      ++|+||||||+||||++++++|+++|       ++|++++|+...... ....+++++.+|++|++.+.++++ ++|+||
T Consensus        13 ~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~~d~vi   91 (342)
T 2hrz_A           13 QGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA-GFSGAVDARAADLSAPGEAEKLVEARPDVIF   91 (342)
T ss_dssp             SCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT-TCCSEEEEEECCTTSTTHHHHHHHTCCSEEE
T ss_pred             cCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc-ccCCceeEEEcCCCCHHHHHHHHhcCCCEEE
Confidence            35789999999999999999999999       899999998654221 123578999999999999999994 899999


Q ss_pred             EccccCC-----CcchhhhhhhHHHHHHHHHHHHcC-----CCEEEEEecC-CcCCCCc----------cccchHHHHHH
Q 023205          127 SCVGGFG-----SNSYMYKINGTANINAIRAASEKG-----VKRFVYISAA-DFGVANY----------LLQGYYEGKRA  185 (286)
Q Consensus       127 ~~a~~~~-----~~~~~~~~~~~~~~~l~~~a~~~~-----v~~~v~~Ss~-~~~~~~~----------~~~~y~~sK~~  185 (286)
                      |+|+...     ++...+++|+.++.+++++|++.+     +++||++||. +|+....          +.+.|+.+|..
T Consensus        92 h~A~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~  171 (342)
T 2hrz_A           92 HLAAIVSGEAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAPLPYPIPDEFHTTPLTSYGTQKAI  171 (342)
T ss_dssp             ECCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCSSCCSSBCTTCCCCCSSHHHHHHHH
T ss_pred             ECCccCcccccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCCCCCCCcCCCCCCCCcchHHHHHHH
Confidence            9999753     344667899999999999998876     8899999994 4554322          56789999999


Q ss_pred             HHHHHHH---hCCCcEEEEeeCeeec-CCCCCccccCccccCchHHHHHHhcccCCC--CCCCCCccCCCccHHHHHHHH
Q 023205          186 AETELLT---RYPYGGVILRPGFIYG-TRTVGGMKLPLGVIGSPMEMVLQHAKPLSQ--LPLVGPLFTPPVNVTVVAKVA  259 (286)
Q Consensus       186 ~E~~~~~---~~g~~~~ilRp~~v~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~g~~~~~~i~v~Dva~~~  259 (286)
                      +|+++++   ..+++++++|++.+|| |......      ...++..+.........  ++..++...++++++|+|+++
T Consensus       172 ~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~~~  245 (342)
T 2hrz_A          172 CELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAA------ASGFFSNILREPLVGQEAVLPVPESIRHWHASPRSAVGFL  245 (342)
T ss_dssp             HHHHHHHHHHTTSCEEEEEEECEETTCCSSCCCS------GGGHHHHHHHHHHTTCCEEECSCTTCEEEEECHHHHHHHH
T ss_pred             HHHHHHHHHHhcCCCceeEEeeeEEecCCCCcch------hHHHHHHHHHHHhcCCCeeccCCCccceeeEehHHHHHHH
Confidence            9998865   3579999999999998 5432110      01233333333322332  334344566789999999999


Q ss_pred             HHHhcCCCC---CCCeeEeccccccccc
Q 023205          260 VRAATDPVF---PPGIVDVHGILRYSQK  284 (286)
Q Consensus       260 ~~~l~~~~~---~~~~~~l~~~~~~s~~  284 (286)
                      +.+++.+..   .+++||+++ +.++++
T Consensus       246 ~~~~~~~~~~~~~~~~~ni~g-~~~s~~  272 (342)
T 2hrz_A          246 IHGAMIDVEKVGPRRNLSMPG-LSATVG  272 (342)
T ss_dssp             HHHHHSCHHHHCSCCEEECCC-EEEEHH
T ss_pred             HHHHhccccccCCccEEEcCC-CCCCHH
Confidence            999987642   478999965 557764

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=99.97  E-value=1.7e-30  Score=225.63  Aligned_cols=219  Identities=17%  Similarity=0.200  Sum_probs=157.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCccc--cc--ccC---CceeEEeccCCCHhHHHHHhcCCCEEEEc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSL--RD--SWA---NNVIWHQGNLLSSDSWKEALDGVTAVISC  128 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~--~~--~~~---~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~  128 (286)
                      +++||||||+||||++++++|+++|++|++++|+.+...  ..  ...   .+++++++|++|++.+.++++++|+|||+
T Consensus         5 ~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~   84 (337)
T 2c29_D            5 SETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLADEGSFDEAIKGCTGVFHV   84 (337)
T ss_dssp             -CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHHHHTSTTHHHHEEEEECCTTSTTTTHHHHTTCSEEEEC
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHHHHhcccCCCeEEEEEcCCCCHHHHHHHHcCCCEEEEe
Confidence            578999999999999999999999999999999875311  00  011   26889999999999999999999999999


Q ss_pred             cccCCCc-----chhhhhhhHHHHHHHHHHHHcC-CCEEEEEecCC--cCCCC--------------------ccccchH
Q 023205          129 VGGFGSN-----SYMYKINGTANINAIRAASEKG-VKRFVYISAAD--FGVAN--------------------YLLQGYY  180 (286)
Q Consensus       129 a~~~~~~-----~~~~~~~~~~~~~l~~~a~~~~-v~~~v~~Ss~~--~~~~~--------------------~~~~~y~  180 (286)
                      |++....     ...+++|+.++.+++++|++.+ +++|||+||..  ++...                    .+...|+
T Consensus        85 A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~riV~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~  164 (337)
T 2c29_D           85 ATPMDFESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAGTVNIQEHQLPVYDESCWSDMEFCRAKKMTAWMYF  164 (337)
T ss_dssp             CCCCCSSCSSHHHHTHHHHHHHHHHHHHHHHHHSCCCEEEEECCGGGTSCSSSCCSEECTTCCCCHHHHHHHCCTTHHHH
T ss_pred             ccccCCCCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEEEeeeHhhcccCCCCCcccCcccCCchhhhcccCCccchHH
Confidence            9875321     1467899999999999999887 89999999953  33211                    1234699


Q ss_pred             HHHHHHHHHHHH---hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHH
Q 023205          181 EGKRAAETELLT---RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAK  257 (286)
Q Consensus       181 ~sK~~~E~~~~~---~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~  257 (286)
                      .+|..+|+++++   ..|++++++||+.+|||......       ...+......... ............|++++|+|+
T Consensus       165 ~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~-------~~~~~~~~~~~~g-~~~~~~~~~~~~~i~v~Dva~  236 (337)
T 2c29_D          165 VSKTLAEQAAWKYAKENNIDFITIIPTLVVGPFIMSSM-------PPSLITALSPITG-NEAHYSIIRQGQFVHLDDLCN  236 (337)
T ss_dssp             HHHHHHHHHHHHHHHHHTCCEEEEEECEEESCCSCSSC-------CHHHHHHTHHHHT-CGGGHHHHTEEEEEEHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCC-------CchHHHHHHHHcC-CCccccccCCCCEEEHHHHHH
Confidence            999999998764   46899999999999999754321       1111111000111 111010011234899999999


Q ss_pred             HHHHHhcCCCCCCCeeEeccccccccc
Q 023205          258 VAVRAATDPVFPPGIVDVHGILRYSQK  284 (286)
Q Consensus       258 ~~~~~l~~~~~~~~~~~l~~~~~~s~~  284 (286)
                      +++.+++++.. ++.|++.+. .++++
T Consensus       237 a~~~~~~~~~~-~~~~~~~~~-~~s~~  261 (337)
T 2c29_D          237 AHIYLFENPKA-EGRYICSSH-DCIIL  261 (337)
T ss_dssp             HHHHHHHCTTC-CEEEEECCE-EEEHH
T ss_pred             HHHHHhcCccc-CceEEEeCC-CCCHH
Confidence            99999987654 456776654 45543

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=99.97  E-value=2.6e-31  Score=230.80  Aligned_cols=221  Identities=17%  Similarity=0.155  Sum_probs=156.9

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc-----cc-cCCceeEEeccCCCHhHHHHHhcCCCEEEEc
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DS-WANNVIWHQGNLLSSDSWKEALDGVTAVISC  128 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~-----~~-~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~  128 (286)
                      ++|+||||||+||||++|+++|+++|++|++++|+.++...     .. ...+++++++|++|++.+.++++++|+|||+
T Consensus         8 ~~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~   87 (338)
T 2rh8_A            8 GKKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQELGDLKIFRADLTDELSFEAPIAGCDFVFHV   87 (338)
T ss_dssp             -CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHGGGSCEEEEECCTTTSSSSHHHHTTCSEEEEE
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcCCCCcEEEEecCCCChHHHHHHHcCCCEEEEe
Confidence            46799999999999999999999999999999998654211     00 1246889999999999999999999999999


Q ss_pred             cccCCC----c-chhhhhhhHHHHHHHHHHHHcC-CCEEEEEecCC--cC-----C----CCc---------c----ccc
Q 023205          129 VGGFGS----N-SYMYKINGTANINAIRAASEKG-VKRFVYISAAD--FG-----V----ANY---------L----LQG  178 (286)
Q Consensus       129 a~~~~~----~-~~~~~~~~~~~~~l~~~a~~~~-v~~~v~~Ss~~--~~-----~----~~~---------~----~~~  178 (286)
                      |+....    + ...+++|+.++.+++++|++.+ +++|||+||..  ++     .    .+.         +    ...
T Consensus        88 A~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~r~V~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~  167 (338)
T 2rh8_A           88 ATPVHFASEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILTSSAAAVTINQLDGTGLVVDEKNWTDIEFLTSAKPPTWG  167 (338)
T ss_dssp             SSCCCC---------CHHHHHHHHHHHHHHHHCTTCCEEEEECCHHHHHHHHHTCSCCCCCTTTTTCC-------CCCCC
T ss_pred             CCccCCCCCCcHHHHHHHHHHHHHHHHHHHHHcCCcCEEEEEecHHHeecCCcCCCCcccChhhccchhhccccCCccch
Confidence            987532    1 2378899999999999999986 99999999952  11     1    000         1    115


Q ss_pred             hHHHHHHHHHHHHH---hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCC-CCC-----CCCccCCC
Q 023205          179 YYEGKRAAETELLT---RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQ-LPL-----VGPLFTPP  249 (286)
Q Consensus       179 y~~sK~~~E~~~~~---~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-----~g~~~~~~  249 (286)
                      |+.+|..+|+++++   ..|++++++||+.+|||......       ...+..+......... ++.     .+++.++|
T Consensus       168 Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~-------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~  240 (338)
T 2rh8_A          168 YPASKTLAEKAAWKFAEENNIDLITVIPTLMAGSSLTSDV-------PSSIGLAMSLITGNEFLINGMKGMQMLSGSVSI  240 (338)
T ss_dssp             CTTSCCHHHHHHHHHHHHHTCCEEEEEECEEESCCSSSSC-------CHHHHHHHHHHHTCHHHHHHHHHHHHHHSSEEE
T ss_pred             HHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCC-------CchHHHHHHHHcCCccccccccccccccCcccE
Confidence            99999999998764   36899999999999999764321       1111111111111000 000     01123479


Q ss_pred             ccHHHHHHHHHHHhcCCCCCCCeeEeccccccccc
Q 023205          250 VNVTVVAKVAVRAATDPVFPPGIVDVHGILRYSQK  284 (286)
Q Consensus       250 i~v~Dva~~~~~~l~~~~~~~~~~~l~~~~~~s~~  284 (286)
                      ++++|+|++++.+++++.. ++.|++++. .++++
T Consensus       241 i~v~Dva~a~~~~~~~~~~-~~~~~~~~~-~~s~~  273 (338)
T 2rh8_A          241 AHVEDVCRAHIFVAEKESA-SGRYICCAA-NTSVP  273 (338)
T ss_dssp             EEHHHHHHHHHHHHHCTTC-CEEEEECSE-EECHH
T ss_pred             EEHHHHHHHHHHHHcCCCc-CCcEEEecC-CCCHH
Confidence            9999999999999987654 457888764 45553

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=99.97  E-value=3.4e-30  Score=224.64  Aligned_cols=204  Identities=19%  Similarity=0.179  Sum_probs=160.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc------cccCCceeEEeccCCCHhHHHHHhc--CCCEEEE
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD--GVTAVIS  127 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~------~~~~~~~~~i~~Dl~d~~~~~~~~~--~~d~vi~  127 (286)
                      +|+||||||||+||++++++|+++|++|++++|+......      .....+++++.+|+.|.+++.++++  ++|+|||
T Consensus        10 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vi~   89 (346)
T 3i6i_A           10 KGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEKILKEHEIDIVVS   89 (346)
T ss_dssp             -CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHHHTTCCEEEE
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHHHHhhCCCCEEEE
Confidence            4689999999999999999999999999999998733111      1123689999999999999999999  9999999


Q ss_pred             ccccCCCcchhhhhhhHHHHHHHHHHHHcC-CCEEEEEecCCcCCC------CccccchHHHHHHHHHHHHHhCCCcEEE
Q 023205          128 CVGGFGSNSYMYKINGTANINAIRAASEKG-VKRFVYISAADFGVA------NYLLQGYYEGKRAAETELLTRYPYGGVI  200 (286)
Q Consensus       128 ~a~~~~~~~~~~~~~~~~~~~l~~~a~~~~-v~~~v~~Ss~~~~~~------~~~~~~y~~sK~~~E~~~~~~~g~~~~i  200 (286)
                      +++..         |+.++.+++++|++.+ +++||+ |+  ||..      ..+...|+.+|+.+|+++.+ .|+++++
T Consensus        90 ~a~~~---------n~~~~~~l~~aa~~~g~v~~~v~-S~--~g~~~~e~~~~~p~~~y~~sK~~~e~~l~~-~g~~~ti  156 (346)
T 3i6i_A           90 TVGGE---------SILDQIALVKAMKAVGTIKRFLP-SE--FGHDVNRADPVEPGLNMYREKRRVRQLVEE-SGIPFTY  156 (346)
T ss_dssp             CCCGG---------GGGGHHHHHHHHHHHCCCSEEEC-SC--CSSCTTTCCCCTTHHHHHHHHHHHHHHHHH-TTCCBEE
T ss_pred             CCchh---------hHHHHHHHHHHHHHcCCceEEee-cc--cCCCCCccCcCCCcchHHHHHHHHHHHHHH-cCCCEEE
Confidence            99873         7788899999999999 999997 54  3332      13567899999999998876 8999999


Q ss_pred             EeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCC--CCCccCCCccHHHHHHHHHHHhcCCCCCCCeeEeccc
Q 023205          201 LRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPL--VGPLFTPPVNVTVVAKVAVRAATDPVFPPGIVDVHGI  278 (286)
Q Consensus       201 lRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~l~~~  278 (286)
                      +|||.++|.......           ... ......+.++.  .|+..++|++++|+|++++.++.++...+++|++.++
T Consensus       157 vrpg~~~g~~~~~~~-----------~~~-~~~~~~~~~~~~g~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~g~  224 (346)
T 3i6i_A          157 ICCNSIASWPYYNNI-----------HPS-EVLPPTDFFQIYGDGNVKAYFVAGTDIGKFTMKTVDDVRTLNKSVHFRPS  224 (346)
T ss_dssp             EECCEESSCCCSCC-----------------CCCCSSCEEEETTSCCCEEEECHHHHHHHHHHHTTCGGGTTEEEECCCG
T ss_pred             EEecccccccCcccc-----------ccc-cccCCCceEEEccCCCceEEecCHHHHHHHHHHHHhCccccCeEEEEeCC
Confidence            999999996532211           101 11112233333  3455789999999999999999998777899999875


Q ss_pred             -cccccc
Q 023205          279 -LRYSQK  284 (286)
Q Consensus       279 -~~~s~~  284 (286)
                       +.+||+
T Consensus       225 ~~~~s~~  231 (346)
T 3i6i_A          225 CNCLNIN  231 (346)
T ss_dssp             GGEECHH
T ss_pred             CCCCCHH
Confidence             777775

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=99.97  E-value=2.9e-29  Score=237.74  Aligned_cols=230  Identities=20%  Similarity=0.164  Sum_probs=173.2

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc------cccCCceeEEeccCCCHhHHHHHhc--CCCEEE
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD--GVTAVI  126 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~------~~~~~~~~~i~~Dl~d~~~~~~~~~--~~d~vi  126 (286)
                      ++|+||||||+|+||++++++|+++|++|++++|+......      .....+++++.+|+.|++.+.++++  ++|+||
T Consensus        10 ~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~D~Vi   89 (699)
T 1z45_A           10 TSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDSVI   89 (699)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhccCCceEEEEcCCCCHHHHHHHHHhCCCCEEE
Confidence            35799999999999999999999999999999997654211      1113578999999999999999998  899999


Q ss_pred             EccccCC------CcchhhhhhhHHHHHHHHHHHHcCCCEEEEEecC-CcCCC--------------CccccchHHHHHH
Q 023205          127 SCVGGFG------SNSYMYKINGTANINAIRAASEKGVKRFVYISAA-DFGVA--------------NYLLQGYYEGKRA  185 (286)
Q Consensus       127 ~~a~~~~------~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~-~~~~~--------------~~~~~~y~~sK~~  185 (286)
                      |+|+...      .....+++|+.++.+++++|++.++++||++||. +|+..              ..+.+.|+.+|..
T Consensus        90 h~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~iV~~SS~~vyg~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~  169 (699)
T 1z45_A           90 HFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKYA  169 (699)
T ss_dssp             ECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCCCCSHHHHHHHH
T ss_pred             ECCcccCcCccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECcHHHhCCCccccccCCccccCCCCCCChHHHHHHH
Confidence            9999764      2345678999999999999999999999999994 45432              1235789999999


Q ss_pred             HHHHHHH---h--CCCcEEEEeeCeeecCCCCCcccc-CccccCchHHHHHHhccc-CCCCCCC--------CCccCCCc
Q 023205          186 AETELLT---R--YPYGGVILRPGFIYGTRTVGGMKL-PLGVIGSPMEMVLQHAKP-LSQLPLV--------GPLFTPPV  250 (286)
Q Consensus       186 ~E~~~~~---~--~g~~~~ilRp~~v~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~--------g~~~~~~i  250 (286)
                      +|++++.   .  .+++++++||+.+||+...+.+.. +.+....++.++...... ..++++.        |+..++||
T Consensus       170 ~E~~~~~~~~~~~~g~~~~ilR~~~vyG~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i  249 (699)
T 1z45_A          170 IENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTPIRDYI  249 (699)
T ss_dssp             HHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------CCSSCEECEE
T ss_pred             HHHHHHHHHHhccCCCcEEEEEeccccCCCcccccccccccchhHHHHHHHHHHhcCCCceEEeCCcccCCCCCeeEeeE
Confidence            9998875   2  689999999999999864322110 001112344545444332 2344433        45578999


Q ss_pred             cHHHHHHHHHHHhcCC------CCCCCeeEeccccccccc
Q 023205          251 NVTVVAKVAVRAATDP------VFPPGIVDVHGILRYSQK  284 (286)
Q Consensus       251 ~v~Dva~~~~~~l~~~------~~~~~~~~l~~~~~~s~~  284 (286)
                      +++|+|++++.+++.+      ...+++||+++++.++++
T Consensus       250 ~v~Dva~a~~~a~~~~~~~~~~~~~~~~yni~~~~~~s~~  289 (699)
T 1z45_A          250 HVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVF  289 (699)
T ss_dssp             EHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCCEEHH
T ss_pred             EHHHHHHHHHHHHhhhhccccccCCceEEEECCCCCCcHH
Confidence            9999999999998642      223579999999988764

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.97  E-value=1.1e-30  Score=223.14  Aligned_cols=211  Identities=18%  Similarity=0.183  Sum_probs=160.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCC-CeEEEEecCCCccc-ccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccccCC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRG-LTVASLSRSGRSSL-RDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFG  133 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g-~~V~~l~R~~~~~~-~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~~~  133 (286)
                      +|+|+||||||++|++++++|+++| ++|++++|++++.. ......+++++.+|+.|++++.++++++|+|||+++...
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~~   84 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQGAEVVQGDQDDQVIMELALNGAYATFIVTNYWE   84 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECCCHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHHHHHHHCCCEEEEecCCCHHHHHHHHhcCCEEEEeCCCCc
Confidence            5789999999999999999999998 99999999876531 111235789999999999999999999999999997542


Q ss_pred             CcchhhhhhhHHHHHHHHHHHHcCCCEEEEEecCC-cCCC-CccccchHHHHHHHHHHHHHhCCCcEEEEeeCeeecCCC
Q 023205          134 SNSYMYKINGTANINAIRAASEKGVKRFVYISAAD-FGVA-NYLLQGYYEGKRAAETELLTRYPYGGVILRPGFIYGTRT  211 (286)
Q Consensus       134 ~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~~-~~~~-~~~~~~y~~sK~~~E~~~~~~~g~~~~ilRp~~v~g~~~  211 (286)
                      ..  ..+.++.++.+++++|++.++++||++|+.. ++.. ..+...|+.+|..+|+++++ .|++++++||+++||+..
T Consensus        85 ~~--~~~~~~~~~~~~~~aa~~~gv~~iv~~S~~~~~~~~~~~~~~~y~~sK~~~e~~~~~-~gi~~~ilrp~~~~~~~~  161 (299)
T 2wm3_A           85 SC--SQEQEVKQGKLLADLARRLGLHYVVYSGLENIKKLTAGRLAAAHFDGKGEVEEYFRD-IGVPMTSVRLPCYFENLL  161 (299)
T ss_dssp             HT--CHHHHHHHHHHHHHHHHHHTCSEEEECCCCCHHHHTTTSCCCHHHHHHHHHHHHHHH-HTCCEEEEECCEEGGGGG
T ss_pred             cc--cchHHHHHHHHHHHHHHHcCCCEEEEEcCccccccCCCcccCchhhHHHHHHHHHHH-CCCCEEEEeecHHhhhch
Confidence            21  2356778899999999999999999977743 2211 12356899999999998876 689999999999998643


Q ss_pred             CCccccCccccCchHHHHHHhcccCC--CCCC-CCCccCCCccHHHHHHHHHHHhcCC-CCCCCeeEeccccccccc
Q 023205          212 VGGMKLPLGVIGSPMEMVLQHAKPLS--QLPL-VGPLFTPPVNVTVVAKVAVRAATDP-VFPPGIVDVHGILRYSQK  284 (286)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~g~~~~~~i~v~Dva~~~~~~l~~~-~~~~~~~~l~~~~~~s~~  284 (286)
                      ...  .+            .......  .+.. .++...+|++++|+|++++.++.++ ...+++|++++ +.+|++
T Consensus       162 ~~~--~~------------~~~~~g~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~g~~~~~~g-~~~s~~  223 (299)
T 2wm3_A          162 SHF--LP------------QKAPDGKSYLLSLPTGDVPMDGMSVSDLGPVVLSLLKMPEKYVGQNIGLST-CRHTAE  223 (299)
T ss_dssp             TTT--CC------------EECTTSSSEEECCCCTTSCEEEECGGGHHHHHHHHHHSHHHHTTCEEECCS-EEECHH
T ss_pred             hhc--CC------------cccCCCCEEEEEecCCCCccceecHHHHHHHHHHHHcChhhhCCeEEEeee-ccCCHH
Confidence            200  00            0001110  1111 2567789999999999999999875 34588999998 457764

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.97  E-value=5.8e-29  Score=206.01  Aligned_cols=206  Identities=18%  Similarity=0.213  Sum_probs=158.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC--eEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccccCC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGL--TVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFG  133 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~--~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~~~  133 (286)
                      +|+|+||||+|+||++++++|+++|+  +|++++|++++... ....++.++.+|++|++++.++++++|+||||||...
T Consensus        18 ~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~-~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~~~   96 (242)
T 2bka_A           18 NKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDE-EAYKNVNQEVVDFEKLDDYASAFQGHDVGFCCLGTTR   96 (242)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCS-GGGGGCEEEECCGGGGGGGGGGGSSCSEEEECCCCCH
T ss_pred             CCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccc-cccCCceEEecCcCCHHHHHHHhcCCCEEEECCCccc
Confidence            46899999999999999999999999  99999998765321 1224789999999999999999999999999999753


Q ss_pred             C---cchhhhhhhHHHHHHHHHHHHcCCCEEEEEecCC-cCCCCccccchHHHHHHHHHHHHHhCCC-cEEEEeeCeeec
Q 023205          134 S---NSYMYKINGTANINAIRAASEKGVKRFVYISAAD-FGVANYLLQGYYEGKRAAETELLTRYPY-GGVILRPGFIYG  208 (286)
Q Consensus       134 ~---~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~~-~~~~~~~~~~y~~sK~~~E~~~~~~~g~-~~~ilRp~~v~g  208 (286)
                      .   ....+++|+.++.++++++++.++++||++||.. ++   .+...|+.+|..+|.+++. .++ +++++|||.++|
T Consensus        97 ~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS~~~~~---~~~~~Y~~sK~~~e~~~~~-~~~~~~~~vrpg~v~~  172 (242)
T 2bka_A           97 GKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADK---SSNFLYLQVKGEVEAKVEE-LKFDRYSVFRPGVLLC  172 (242)
T ss_dssp             HHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCT---TCSSHHHHHHHHHHHHHHT-TCCSEEEEEECCEEEC
T ss_pred             ccCCcccceeeeHHHHHHHHHHHHHCCCCEEEEEccCcCCC---CCcchHHHHHHHHHHHHHh-cCCCCeEEEcCceecC
Confidence            2   3456789999999999999999999999999953 33   3456899999999997765 678 599999999999


Q ss_pred             CCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcCCCCCCCeeEeccccc
Q 023205          209 TRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDPVFPPGIVDVHGILR  280 (286)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~l~~~~~  280 (286)
                      +.....          ..+.+......  .+|.. .....+++++|+|++++.++.++.. .+.+++.+++-
T Consensus       173 ~~~~~~----------~~~~~~~~~~~--~~~~~-~~~~~~~~~~dva~~~~~~~~~~~~-~~~~~~~~~~i  230 (242)
T 2bka_A          173 DRQESR----------PGEWLVRKFFG--SLPDS-WASGHSVPVVTVVRAMLNNVVRPRD-KQMELLENKAI  230 (242)
T ss_dssp             TTGGGS----------HHHHHHHHHHC--SCCTT-GGGGTEEEHHHHHHHHHHHHTSCCC-SSEEEEEHHHH
T ss_pred             CCCCCc----------HHHHHHHHhhc--ccCcc-ccCCcccCHHHHHHHHHHHHhCccc-cCeeEeeHHHH
Confidence            864221          11222221111  12211 1123589999999999999988765 56777776554

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=99.97  E-value=5.7e-29  Score=212.48  Aligned_cols=201  Identities=15%  Similarity=0.125  Sum_probs=147.5

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccccC--CC
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGF--GS  134 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~~--~~  134 (286)
                      |||||||||||||++|+++|+++||+|++++|++.+.       .   +..|    +...+.++++|+|||+|+..  ..
T Consensus         1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~~-------~---~~~~----~~~~~~l~~~d~vihla~~~i~~~   66 (298)
T 4b4o_A            1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGPG-------R---ITWD----ELAASGLPSCDAAVNLAGENILNP   66 (298)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTT-------E---EEHH----HHHHHCCCSCSEEEECCCCCSSCT
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCcC-------e---eecc----hhhHhhccCCCEEEEeccCcccch
Confidence            6899999999999999999999999999999986531       1   1222    33446678999999999753  11


Q ss_pred             --------cchhhhhhhHHHHHHHHHHHHcCCC--EEEEEecC-CcCCCC----------ccccchHHHHHHHHHHHH-H
Q 023205          135 --------NSYMYKINGTANINAIRAASEKGVK--RFVYISAA-DFGVAN----------YLLQGYYEGKRAAETELL-T  192 (286)
Q Consensus       135 --------~~~~~~~~~~~~~~l~~~a~~~~v~--~~v~~Ss~-~~~~~~----------~~~~~y~~sK~~~E~~~~-~  192 (286)
                              ....++.|+.++.++++++++.+.+  +||+.||. .|+...          .+...|+..|...|.... +
T Consensus        67 ~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~~~~~~~i~~Ss~~vyg~~~~~~~~E~~p~~~~~~~~~~~~~~e~~~~~~  146 (298)
T 4b4o_A           67 LRRWNETFQKEVLGSRLETTQLLAKAITKAPQPPKAWVLVTGVAYYQPSLTAEYDEDSPGGDFDFFSNLVTKWEAAARLP  146 (298)
T ss_dssp             TSCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSCCSEEEEEEEGGGSCCCSSCCBCTTCCCSCSSHHHHHHHHHHHHHCCS
T ss_pred             hhhhhhhhhhhhhhHHHHHHHHHHHHHHHhCCCceEEEEEeeeeeecCCCCCcccccCCccccchhHHHHHHHHHHHHhh
Confidence                    1245678999999999999988754  57777874 455432          123457777777776433 2


Q ss_pred             hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCC-CCCCCCCccCCCccHHHHHHHHHHHhcCCCCCCC
Q 023205          193 RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLS-QLPLVGPLFTPPVNVTVVAKVAVRAATDPVFPPG  271 (286)
Q Consensus       193 ~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~i~v~Dva~~~~~~l~~~~~~~~  271 (286)
                      ..+++++++||+.+|||..            ..+..+........ .....|+..++|||++|+|++++.+++++.. ++
T Consensus       147 ~~~~~~~~~r~~~v~g~~~------------~~~~~~~~~~~~~~~~~~g~g~~~~~~ihv~Dva~a~~~~~~~~~~-~g  213 (298)
T 4b4o_A          147 GDSTRQVVVRSGVVLGRGG------------GAMGHMLLPFRLGLGGPIGSGHQFFPWIHIGDLAGILTHALEANHV-HG  213 (298)
T ss_dssp             SSSSEEEEEEECEEECTTS------------HHHHHHHHHHHTTCCCCBTTSCSBCCEEEHHHHHHHHHHHHHCTTC-CE
T ss_pred             ccCCceeeeeeeeEEcCCC------------CchhHHHHHHhcCCcceecccCceeecCcHHHHHHHHHHHHhCCCC-CC
Confidence            5789999999999999864            12333333333222 2234456689999999999999999998876 56


Q ss_pred             eeEeccccccccc
Q 023205          272 IVDVHGILRYSQK  284 (286)
Q Consensus       272 ~~~l~~~~~~s~~  284 (286)
                      +||+++++++|++
T Consensus       214 ~yn~~~~~~~t~~  226 (298)
T 4b4o_A          214 VLNGVAPSSATNA  226 (298)
T ss_dssp             EEEESCSCCCBHH
T ss_pred             eEEEECCCccCHH
Confidence            9999999999875

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=99.96  E-value=2.8e-29  Score=220.02  Aligned_cols=215  Identities=19%  Similarity=0.210  Sum_probs=163.5

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCC-----CeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcC---CCEEEEc
Q 023205           57 EKLLVLGGNGFVGSHICREALDRG-----LTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDG---VTAVISC  128 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g-----~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~---~d~vi~~  128 (286)
                      |+|||||||||||++++++|+++|     ++|++++|+.....  ....+++++.+|++|++.+.+++++   +|+|||+
T Consensus         2 ~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~vih~   79 (364)
T 2v6g_A            2 SVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW--HEDNPINYVQCDISDPDDSQAKLSPLTDVTHVFYV   79 (364)
T ss_dssp             EEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC--CCSSCCEEEECCTTSHHHHHHHHTTCTTCCEEEEC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc--cccCceEEEEeecCCHHHHHHHHhcCCCCCEEEEC
Confidence            689999999999999999999999     99999999876532  1235789999999999999999998   9999999


Q ss_pred             cccCC-CcchhhhhhhHHHHHHHHHHHHc--CCCEEE-------EEecC-CcCCCC-------------ccccchHHHHH
Q 023205          129 VGGFG-SNSYMYKINGTANINAIRAASEK--GVKRFV-------YISAA-DFGVAN-------------YLLQGYYEGKR  184 (286)
Q Consensus       129 a~~~~-~~~~~~~~~~~~~~~l~~~a~~~--~v~~~v-------~~Ss~-~~~~~~-------------~~~~~y~~sK~  184 (286)
                      |+... +....+++|+.++.+++++|++.  ++++||       |+||. +|+...             .+.+.|.    
T Consensus        80 a~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~~g~~i~~Ss~~vyg~~~~~~~~~~E~~~~~~~~~~y~----  155 (364)
T 2v6g_A           80 TWANRSTEQENCEANSKMFRNVLDAVIPNCPNLKHISLQTGRKHYMGPFESYGKIESHDPPYTEDLPRLKYMNFYY----  155 (364)
T ss_dssp             CCCCCSSHHHHHHHHHHHHHHHHHHHTTTCTTCCEEEEECCTHHHHCCGGGTTTSCCCCSSBCTTSCCCSSCCHHH----
T ss_pred             CCCCcchHHHHHHHhHHHHHHHHHHHHHhccccceEEeccCceEEEechhhccccccCCCCCCccccCCccchhhH----
Confidence            99764 34567899999999999999988  799998       68874 455421             1134574    


Q ss_pred             HHHHHHHH---hCC-CcEEEEeeCeeecCCCCCccccCccccCchHHH-HHHhc--ccCCCCCCCCC-----ccCCCccH
Q 023205          185 AAETELLT---RYP-YGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEM-VLQHA--KPLSQLPLVGP-----LFTPPVNV  252 (286)
Q Consensus       185 ~~E~~~~~---~~g-~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~g~-----~~~~~i~v  252 (286)
                      .+|+++++   ..+ ++++++||+.+||+......       ...... +....  ....++++.|+     ...+++++
T Consensus       156 ~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~-------~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~v  228 (364)
T 2v6g_A          156 DLEDIMLEEVEKKEGLTWSVHRPGNIFGFSPYSMM-------NLVGTLCVYAAICKHEGKVLRFTGCKAAWDGYSDCSDA  228 (364)
T ss_dssp             HHHHHHHHHHTTSTTCEEEEEEESSEECCCTTCSS-------CHHHHHHHHHHHHHHHTCCBCCCSCHHHHHSCBCCEEH
T ss_pred             HHHHHHHHHhhcCCCceEEEECCCceeCCCCCccc-------chHHHHHHHHHHHHhcCCceecCCCcccccccCCCCcH
Confidence            46666654   355 99999999999999764221       111121 22222  12334444443     25788999


Q ss_pred             HHHHHHHHHHhcCCCCCCCeeEeccccccccc
Q 023205          253 TVVAKVAVRAATDPVFPPGIVDVHGILRYSQK  284 (286)
Q Consensus       253 ~Dva~~~~~~l~~~~~~~~~~~l~~~~~~s~~  284 (286)
                      +|+|++++.+++++...+++||+++++.+|++
T Consensus       229 ~Dva~a~~~~~~~~~~~g~~~ni~~~~~~s~~  260 (364)
T 2v6g_A          229 DLIAEHHIWAAVDPYAKNEAFNVSNGDVFKWK  260 (364)
T ss_dssp             HHHHHHHHHHHHCGGGTTEEEEECCSCCBCHH
T ss_pred             HHHHHHHHHHHhCCCCCCceEEecCCCcCCHH
Confidence            99999999999887655889999999888875

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=99.96  E-value=3.1e-29  Score=211.24  Aligned_cols=197  Identities=19%  Similarity=0.172  Sum_probs=156.9

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcC--CCEEEEccccCC-
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDG--VTAVISCVGGFG-  133 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~--~d~vi~~a~~~~-  133 (286)
                      |+|+||||+|+||++++++|++ |++|++++|++...      ++   +.+|++|++++.+++++  +|+||||||... 
T Consensus         1 m~ilVtGatG~iG~~l~~~L~~-g~~V~~~~r~~~~~------~~---~~~Dl~~~~~~~~~~~~~~~d~vi~~a~~~~~   70 (273)
T 2ggs_A            1 MRTLITGASGQLGIELSRLLSE-RHEVIKVYNSSEIQ------GG---YKLDLTDFPRLEDFIIKKRPDVIINAAAMTDV   70 (273)
T ss_dssp             CCEEEETTTSHHHHHHHHHHTT-TSCEEEEESSSCCT------TC---EECCTTSHHHHHHHHHHHCCSEEEECCCCCCH
T ss_pred             CEEEEECCCChhHHHHHHHHhc-CCeEEEecCCCcCC------CC---ceeccCCHHHHHHHHHhcCCCEEEECCcccCh
Confidence            4799999999999999999994 89999999987431      22   88999999999999986  999999999764 


Q ss_pred             -----CcchhhhhhhHHHHHHHHHHHHcCCCEEEEEecC-CcCCCC---------ccccchHHHHHHHHHHHHHhCCCcE
Q 023205          134 -----SNSYMYKINGTANINAIRAASEKGVKRFVYISAA-DFGVAN---------YLLQGYYEGKRAAETELLTRYPYGG  198 (286)
Q Consensus       134 -----~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~-~~~~~~---------~~~~~y~~sK~~~E~~~~~~~g~~~  198 (286)
                           +....+++|+.++.++++++++.++ +||++||. .|+...         .+.+.|+.+|..+|.+++.   +++
T Consensus        71 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~iv~~SS~~~~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~---~~~  146 (273)
T 2ggs_A           71 DKCEIEKEKAYKINAEAVRHIVRAGKVIDS-YIVHISTDYVFDGEKGNYKEEDIPNPINYYGLSKLLGETFALQ---DDS  146 (273)
T ss_dssp             HHHHHCHHHHHHHHTHHHHHHHHHHHHTTC-EEEEEEEGGGSCSSSCSBCTTSCCCCSSHHHHHHHHHHHHHCC---TTC
T ss_pred             hhhhhCHHHHHHHhHHHHHHHHHHHHHhCC-eEEEEecceeEcCCCCCcCCCCCCCCCCHHHHHHHHHHHHHhC---CCe
Confidence                 3446778999999999999999887 99999994 343322         2457899999999998765   789


Q ss_pred             EEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcCCCCCCCeeEeccc
Q 023205          199 VILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDPVFPPGIVDVHGI  278 (286)
Q Consensus       199 ~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~l~~~  278 (286)
                      +++||+.+||+.             .+...+.........++..++ ..++++++|+|++++.+++++.  +++||+.+ 
T Consensus       147 ~~iR~~~v~G~~-------------~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~dva~~i~~~~~~~~--~g~~~i~~-  209 (273)
T 2ggs_A          147 LIIRTSGIFRNK-------------GFPIYVYKTLKEGKTVFAFKG-YYSPISARKLASAILELLELRK--TGIIHVAG-  209 (273)
T ss_dssp             EEEEECCCBSSS-------------SHHHHHHHHHHTTCCEEEESC-EECCCBHHHHHHHHHHHHHHTC--CEEEECCC-
T ss_pred             EEEecccccccc-------------HHHHHHHHHHHcCCCEEeecC-CCCceEHHHHHHHHHHHHhcCc--CCeEEECC-
Confidence            999999999821             123333333333334444455 7899999999999999998764  55999999 


Q ss_pred             cccccc
Q 023205          279 LRYSQK  284 (286)
Q Consensus       279 ~~~s~~  284 (286)
                      +.++++
T Consensus       210 ~~~s~~  215 (273)
T 2ggs_A          210 ERISRF  215 (273)
T ss_dssp             CCEEHH
T ss_pred             CcccHH
Confidence            888875

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.96  E-value=4.7e-28  Score=197.96  Aligned_cols=193  Identities=17%  Similarity=0.174  Sum_probs=149.6

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHH-HCCCeEEEEecCCC-cccccc--cCCceeEEeccCCCHhHHHHHhcCCCEEEEccc
Q 023205           55 PSEKLLVLGGNGFVGSHICREAL-DRGLTVASLSRSGR-SSLRDS--WANNVIWHQGNLLSSDSWKEALDGVTAVISCVG  130 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll-~~g~~V~~l~R~~~-~~~~~~--~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~  130 (286)
                      ||++|+||||+|+||++++++|+ ++|++|++++|+++ +. ...  ...+++++.+|++|++++.++++++|+||||+|
T Consensus         4 mmk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vv~~ag   82 (221)
T 3r6d_A            4 MYXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRI-PPEIIDHERVTVIEGSFQNPGXLEQAVTNAEVVFVGAM   82 (221)
T ss_dssp             SCSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHS-CHHHHTSTTEEEEECCTTCHHHHHHHHTTCSEEEESCC
T ss_pred             eEEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccc-hhhccCCCceEEEECCCCCHHHHHHHHcCCCEEEEcCC
Confidence            45669999999999999999999 89999999999876 42 221  356899999999999999999999999999998


Q ss_pred             cCCCcchhhhhhhHHHHHHHHHHHHcCCCEEEEEecCC-cCCCCcc--------cc-chHHHHHHHHHHHHHhCCCcEEE
Q 023205          131 GFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAAD-FGVANYL--------LQ-GYYEGKRAAETELLTRYPYGGVI  200 (286)
Q Consensus       131 ~~~~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~~-~~~~~~~--------~~-~y~~sK~~~E~~~~~~~g~~~~i  200 (286)
                      ..         |+. +.++++++++.++++||++||.. ++.....        .. .|+.+|..+|.++++ .++++++
T Consensus        83 ~~---------n~~-~~~~~~~~~~~~~~~iv~iSs~~~~~~~~~~~~~~~~~~~~~~y~~~K~~~e~~~~~-~~i~~~~  151 (221)
T 3r6d_A           83 ES---------GSD-MASIVKALSRXNIRRVIGVSMAGLSGEFPVALEKWTFDNLPISYVQGERQARNVLRE-SNLNYTI  151 (221)
T ss_dssp             CC---------HHH-HHHHHHHHHHTTCCEEEEEEETTTTSCSCHHHHHHHHHTSCHHHHHHHHHHHHHHHH-SCSEEEE
T ss_pred             CC---------Chh-HHHHHHHHHhcCCCeEEEEeeceecCCCCcccccccccccccHHHHHHHHHHHHHHh-CCCCEEE
Confidence            64         333 78999999999999999999953 3322111        11 799999999997765 8999999


Q ss_pred             EeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHh--cCCC-CCCCeeEecc
Q 023205          201 LRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAA--TDPV-FPPGIVDVHG  277 (286)
Q Consensus       201 lRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l--~~~~-~~~~~~~l~~  277 (286)
                      ||||+++++.....+...                 ....    .....+++.+|+|++++.++  .++. ..++.+.+.+
T Consensus       152 vrpg~v~~~~~~~~~~~~-----------------~~~~----~~~~~~~~~~dvA~~~~~l~~~~~~~~~~~~~~~i~~  210 (221)
T 3r6d_A          152 LRLTWLYNDPEXTDYELI-----------------PEGA----QFNDAQVSREAVVKAIFDILHAADETPFHRTSIGVGE  210 (221)
T ss_dssp             EEECEEECCTTCCCCEEE-----------------CTTS----CCCCCEEEHHHHHHHHHHHHTCSCCGGGTTEEEEEEC
T ss_pred             EechhhcCCCCCcceeec-----------------cCCc----cCCCceeeHHHHHHHHHHHHHhcChhhhhcceeeecC
Confidence            999999987332211000                 0000    11224799999999999999  7765 5678888887


Q ss_pred             ccc
Q 023205          278 ILR  280 (286)
Q Consensus       278 ~~~  280 (286)
                      |..
T Consensus       211 ~~~  213 (221)
T 3r6d_A          211 PGT  213 (221)
T ss_dssp             TTC
T ss_pred             CCC
Confidence            763

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=99.96  E-value=7.4e-29  Score=227.02  Aligned_cols=205  Identities=14%  Similarity=0.056  Sum_probs=158.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccccCC--
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFG--  133 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~~~--  133 (286)
                      +|+|||||||||||++|++.|+++|++|++++|+..+.         ..+.+|+.+.  +.++++++|+|||+|+...  
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~---------~~v~~d~~~~--~~~~l~~~D~Vih~A~~~~~~  215 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKP---------GKRFWDPLNP--ASDLLDGADVLVHLAGEPIFG  215 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCT---------TCEECCTTSC--CTTTTTTCSEEEECCCC----
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCc---------cceeecccch--hHHhcCCCCEEEECCCCcccc
Confidence            67999999999999999999999999999999987652         2267787643  4567889999999999752  


Q ss_pred             -----CcchhhhhhhHHHHHHHHH-HHHcCCCEEEEEecC-CcC-CC---------CccccchHHHHHHHHHHHHH--hC
Q 023205          134 -----SNSYMYKINGTANINAIRA-ASEKGVKRFVYISAA-DFG-VA---------NYLLQGYYEGKRAAETELLT--RY  194 (286)
Q Consensus       134 -----~~~~~~~~~~~~~~~l~~~-a~~~~v~~~v~~Ss~-~~~-~~---------~~~~~~y~~sK~~~E~~~~~--~~  194 (286)
                           .....+++|+.++.+++++ +++.++++|||+||. +|+ ..         ..+.+.|+.+|...|.++..  ..
T Consensus       216 ~~~~~~~~~~~~~Nv~gt~~ll~a~a~~~~~~r~V~~SS~~vyg~~~~~~~~~E~~~~~~~~y~~~~~~~E~~~~~~~~~  295 (516)
T 3oh8_A          216 RFNDSHKEAIRESRVLPTKFLAELVAESTQCTTMISASAVGFYGHDRGDEILTEESESGDDFLAEVCRDWEHATAPASDA  295 (516)
T ss_dssp             -CCGGGHHHHHHHTHHHHHHHHHHHHHCSSCCEEEEEEEGGGGCSEEEEEEECTTSCCCSSHHHHHHHHHHHTTHHHHHT
T ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCcceEecCCCCCCccCCCCCCCcChHHHHHHHHHHHHHHHHhC
Confidence                 1234678999999999999 666789999999994 565 11         11456789999998876543  57


Q ss_pred             CCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCC-CCCCCCCccCCCccHHHHHHHHHHHhcCCCCCCCee
Q 023205          195 PYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLS-QLPLVGPLFTPPVNVTVVAKVAVRAATDPVFPPGIV  273 (286)
Q Consensus       195 g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~  273 (286)
                      |++++++||+.+||+..            ..+..+........ .....|+..++||+++|+|++++.+++++.. +++|
T Consensus       296 gi~~~ilRp~~v~Gp~~------------~~~~~~~~~~~~g~~~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~~-~g~~  362 (516)
T 3oh8_A          296 GKRVAFIRTGVALSGRG------------GMLPLLKTLFSTGLGGKFGDGTSWFSWIAIDDLTDIYYRAIVDAQI-SGPI  362 (516)
T ss_dssp             TCEEEEEEECEEEBTTB------------SHHHHHHHTTC---CCCCTTSCCEECEEEHHHHHHHHHHHHHCTTC-CEEE
T ss_pred             CCCEEEEEeeEEECCCC------------ChHHHHHHHHHhCCCcccCCCCceEceEeHHHHHHHHHHHHhCccc-CCcE
Confidence            99999999999999863            23444444433322 2223355678999999999999999988764 6699


Q ss_pred             Eeccccccccc
Q 023205          274 DVHGILRYSQK  284 (286)
Q Consensus       274 ~l~~~~~~s~~  284 (286)
                      |+++++.+|++
T Consensus       363 ni~~~~~~s~~  373 (516)
T 3oh8_A          363 NAVAPNPVSNA  373 (516)
T ss_dssp             EESCSCCEEHH
T ss_pred             EEECCCCCCHH
Confidence            99999998875

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.96  E-value=4.3e-29  Score=218.05  Aligned_cols=210  Identities=16%  Similarity=0.142  Sum_probs=157.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCccc-ccc-cCCceeEEecc-CCCHhHHHHHhcCCCEEEEccccC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSL-RDS-WANNVIWHQGN-LLSSDSWKEALDGVTAVISCVGGF  132 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~-~~~-~~~~~~~i~~D-l~d~~~~~~~~~~~d~vi~~a~~~  132 (286)
                      +|+|+||||||+||++++++|+++|++|++++|+.++.. ... ...+++++.+| ++|++++.++++++|+|||+++..
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~l~~~~~v~~v~~D~l~d~~~l~~~~~~~d~Vi~~a~~~   84 (352)
T 1xgk_A            5 KKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFEGAHLAFINTTSQ   84 (352)
T ss_dssp             CCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHHHTTCSEEEECCCST
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhHHHHhhcCCcEEEECCccCCHHHHHHHHhcCCEEEEcCCCC
Confidence            468999999999999999999999999999999876531 111 12478999999 999999999999999999998764


Q ss_pred             CCcchhhhhhhHHHHHHHHHHHHcC-CCEEEEEecCCcC-CCCccccchHHHHHHHHHHHHHhCCCcEEEEeeCeeecCC
Q 023205          133 GSNSYMYKINGTANINAIRAASEKG-VKRFVYISAADFG-VANYLLQGYYEGKRAAETELLTRYPYGGVILRPGFIYGTR  210 (286)
Q Consensus       133 ~~~~~~~~~~~~~~~~l~~~a~~~~-v~~~v~~Ss~~~~-~~~~~~~~y~~sK~~~E~~~~~~~g~~~~ilRp~~v~g~~  210 (286)
                      .     ...|..+ .+++++|++.+ +++|||+||.... ....+...|+.+|..+|+++++ .+++++++||+ +||+.
T Consensus        85 ~-----~~~~~~~-~~l~~aa~~~g~v~~~V~~SS~~~~~~~~~~~~~y~~sK~~~E~~~~~-~gi~~~ivrpg-~~g~~  156 (352)
T 1xgk_A           85 A-----GDEIAIG-KDLADAAKRAGTIQHYIYSSMPDHSLYGPWPAVPMWAPKFTVENYVRQ-LGLPSTFVYAG-IYNNN  156 (352)
T ss_dssp             T-----SCHHHHH-HHHHHHHHHHSCCSEEEEEECCCGGGTSSCCCCTTTHHHHHHHHHHHT-SSSCEEEEEEC-EEGGG
T ss_pred             C-----cHHHHHH-HHHHHHHHHcCCccEEEEeCCccccccCCCCCccHHHHHHHHHHHHHH-cCCCEEEEecc-eecCC
Confidence            2     1345556 89999999999 9999999996311 1123457899999999998876 69999999987 57775


Q ss_pred             CCCccccCccccCchHHHHHHhcccCCC----CCCCCCccCCCccH-HHHHHHHHHHhcCC--CCCCCeeEecccccccc
Q 023205          211 TVGGMKLPLGVIGSPMEMVLQHAKPLSQ----LPLVGPLFTPPVNV-TVVAKVAVRAATDP--VFPPGIVDVHGILRYSQ  283 (286)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~g~~~~~~i~v-~Dva~~~~~~l~~~--~~~~~~~~l~~~~~~s~  283 (286)
                      ...... +      .   +.......+.    ++..++...+++++ +|+|++++.+++++  ...+++||+++ +.+|+
T Consensus       157 ~~~~~~-~------~---~~~~~~~~g~~~~~~~~~~~~~~~~i~v~~Dva~ai~~~l~~~~~~~~g~~~~l~~-~~~s~  225 (352)
T 1xgk_A          157 FTSLPY-P------L---FQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHRIALTF-ETLSP  225 (352)
T ss_dssp             CBSSSC-S------S---CBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHCHHHHTTCEEEECS-EEECH
T ss_pred             chhccc-c------c---ccccccCCCceEEeeccCCCCceeeEecHHHHHHHHHHHHhCCchhhCCeEEEEec-CCCCH
Confidence            432210 0      0   0000011111    23346678899999 99999999999875  23589999996 56776


Q ss_pred             c
Q 023205          284 K  284 (286)
Q Consensus       284 ~  284 (286)
                      +
T Consensus       226 ~  226 (352)
T 1xgk_A          226 V  226 (352)
T ss_dssp             H
T ss_pred             H
Confidence            5

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.96  E-value=4.5e-29  Score=214.36  Aligned_cols=208  Identities=19%  Similarity=0.168  Sum_probs=156.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc-------cccCCceeEEeccCCCHhHHHHHhcCCCEEEEc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-------DSWANNVIWHQGNLLSSDSWKEALDGVTAVISC  128 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~  128 (286)
                      +|+|+||||||++|++++++|+++|++|++++|+......       .....+++++.+|+.|++++.++++++|+|||+
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~   83 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVVISA   83 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEEEEC
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCCHHHHHHHHhCCCEEEEC
Confidence            5689999999999999999999999999999998643110       112468999999999999999999999999999


Q ss_pred             cccCCCcchhhhhhhHHHHHHHHHHHHcC-CCEEEEEecCCcCCCC-------cc-ccchHHHHHHHHHHHHHhCCCcEE
Q 023205          129 VGGFGSNSYMYKINGTANINAIRAASEKG-VKRFVYISAADFGVAN-------YL-LQGYYEGKRAAETELLTRYPYGGV  199 (286)
Q Consensus       129 a~~~~~~~~~~~~~~~~~~~l~~~a~~~~-v~~~v~~Ss~~~~~~~-------~~-~~~y~~sK~~~E~~~~~~~g~~~~  199 (286)
                      ++.....     .++.++.+++++|++.+ +++||+ |+  |+...       .+ ...| .+|..+|+++++ .|++++
T Consensus        84 a~~~~~~-----~~~~~~~~l~~aa~~~g~v~~~v~-S~--~g~~~~~~~~~~~p~~~~y-~sK~~~e~~~~~-~g~~~~  153 (313)
T 1qyd_A           84 LAGGVLS-----HHILEQLKLVEAIKEAGNIKRFLP-SE--FGMDPDIMEHALQPGSITF-IDKRKVRRAIEA-ASIPYT  153 (313)
T ss_dssp             CCCSSSS-----TTTTTHHHHHHHHHHSCCCSEEEC-SC--CSSCTTSCCCCCSSTTHHH-HHHHHHHHHHHH-TTCCBC
T ss_pred             Cccccch-----hhHHHHHHHHHHHHhcCCCceEEe-cC--CcCCccccccCCCCCcchH-HHHHHHHHHHHh-cCCCeE
Confidence            9875432     36677899999999998 999996 44  33211       12 3457 999999998865 799999


Q ss_pred             EEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCC--CCCccCCCccHHHHHHHHHHHhcCCCCCCCeeEecc
Q 023205          200 ILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPL--VGPLFTPPVNVTVVAKVAVRAATDPVFPPGIVDVHG  277 (286)
Q Consensus       200 ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~l~~  277 (286)
                      ++||+.++|+......        ..   ........+.++.  .|+..+++++++|+|++++.++.++...++.|++.+
T Consensus       154 ilrp~~~~~~~~~~~~--------~~---~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~~~g  222 (313)
T 1qyd_A          154 YVSSNMFAGYFAGSLA--------QL---DGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTLNKTMYIRP  222 (313)
T ss_dssp             EEECCEEHHHHTTTSS--------CT---TCCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTCGGGSSSEEECCC
T ss_pred             EEEeceeccccccccc--------cc---cccccCCCCeEEEeCCCCceEEEEEHHHHHHHHHHHHhCcccCCceEEEeC
Confidence            9999999875321100        00   0000011122232  345578999999999999999998766688999988


Q ss_pred             c-cccccc
Q 023205          278 I-LRYSQK  284 (286)
Q Consensus       278 ~-~~~s~~  284 (286)
                      + +.+|++
T Consensus       223 ~~~~~s~~  230 (313)
T 1qyd_A          223 PMNILSQK  230 (313)
T ss_dssp             GGGEEEHH
T ss_pred             CCCccCHH
Confidence            6 678775

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.96  E-value=8.4e-28  Score=198.48  Aligned_cols=196  Identities=16%  Similarity=0.182  Sum_probs=146.2

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCC-CeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccccC
Q 023205           54 PPSEKLLVLGGNGFVGSHICREALDRG-LTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGF  132 (286)
Q Consensus        54 ~~~~~VlVtGatG~iG~~l~~~Ll~~g-~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~~  132 (286)
                      .+||+||||||+|+||++++++|+++| ++|++++|++++.. .....+++++++|++|++++.++++++|+||||++..
T Consensus        21 ~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~-~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vv~~a~~~   99 (236)
T 3qvo_A           21 GHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIH-KPYPTNSQIIMGDVLNHAALKQAMQGQDIVYANLTGE   99 (236)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSC-SSCCTTEEEEECCTTCHHHHHHHHTTCSEEEEECCST
T ss_pred             CcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhc-ccccCCcEEEEecCCCHHHHHHHhcCCCEEEEcCCCC
Confidence            346789999999999999999999999 89999999876532 2334689999999999999999999999999999863


Q ss_pred             CCcchhhhhhhHHHHHHHHHHHHcCCCEEEEEecC-CcCCCCcc--------ccchHHHHHHHHHHHHHhCCCcEEEEee
Q 023205          133 GSNSYMYKINGTANINAIRAASEKGVKRFVYISAA-DFGVANYL--------LQGYYEGKRAAETELLTRYPYGGVILRP  203 (286)
Q Consensus       133 ~~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~-~~~~~~~~--------~~~y~~sK~~~E~~~~~~~g~~~~ilRp  203 (286)
                      ..        ...+.++++++++.++++||++||. .|+.....        ...+...+..+|+.+. ..|+++++|||
T Consensus       100 ~~--------~~~~~~~~~~~~~~~~~~iV~iSS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~gi~~~~vrP  170 (236)
T 3qvo_A          100 DL--------DIQANSVIAAMKACDVKRLIFVLSLGIYDEVPGKFVEWNNAVIGEPLKPFRRAADAIE-ASGLEYTILRP  170 (236)
T ss_dssp             TH--------HHHHHHHHHHHHHTTCCEEEEECCCCC----------------CGGGHHHHHHHHHHH-TSCSEEEEEEE
T ss_pred             ch--------hHHHHHHHHHHHHcCCCEEEEEecceecCCCCcccccchhhcccchHHHHHHHHHHHH-HCCCCEEEEeC
Confidence            21        1345688999999999999999995 33322111        1234455666677554 48999999999


Q ss_pred             CeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcCCC-CCCCeeEecccccc
Q 023205          204 GFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDPV-FPPGIVDVHGILRY  281 (286)
Q Consensus       204 ~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~~-~~~~~~~l~~~~~~  281 (286)
                      |+++++......                ...  ...    .....+++++|+|++++.++.++. ..++.|++.+|...
T Consensus       171 g~i~~~~~~~~~----------------~~~--~~~----~~~~~~i~~~DvA~~i~~ll~~~~~~~g~~~~i~~~~~~  227 (236)
T 3qvo_A          171 AWLTDEDIIDYE----------------LTS--RNE----PFKGTIVSRKSVAALITDIIDKPEKHIGENIGINQPGTD  227 (236)
T ss_dssp             CEEECCSCCCCE----------------EEC--TTS----CCSCSEEEHHHHHHHHHHHHHSTTTTTTEEEEEECSSCC
T ss_pred             CcccCCCCcceE----------------Eec--cCC----CCCCcEECHHHHHHHHHHHHcCcccccCeeEEecCCCCC
Confidence            999987432110                000  000    112357999999999999999877 67899999998754

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.96  E-value=1.2e-28  Score=212.34  Aligned_cols=201  Identities=20%  Similarity=0.214  Sum_probs=153.3

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc---cccCCceeEEeccCCCHhHHHHHhcCCCEEEEcccc
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR---DSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG  131 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~---~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~  131 (286)
                      |+++|+||||||++|++++++|+++|++|++++|+.+....   .....+++++++|+.|++++.++++++|+|||+++.
T Consensus        10 m~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl~d~~~l~~a~~~~d~vi~~a~~   89 (318)
T 2r6j_A           10 MKSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELDEHEKLVELMKKVDVVISALAF   89 (318)
T ss_dssp             CCCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECCCG
T ss_pred             CCCeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcCCCEEEEecCCCHHHHHHHHcCCCEEEECCch
Confidence            45689999999999999999999999999999998753211   112357999999999999999999999999999986


Q ss_pred             CCCcchhhhhhhHHHHHHHHHHHHcC-CCEEEEEecCCcCCC------Ccc-ccchHHHHHHHHHHHHHhCCCcEEEEee
Q 023205          132 FGSNSYMYKINGTANINAIRAASEKG-VKRFVYISAADFGVA------NYL-LQGYYEGKRAAETELLTRYPYGGVILRP  203 (286)
Q Consensus       132 ~~~~~~~~~~~~~~~~~l~~~a~~~~-v~~~v~~Ss~~~~~~------~~~-~~~y~~sK~~~E~~~~~~~g~~~~ilRp  203 (286)
                      ..         +.++.+++++|++.+ +++||+ |+  ++..      ..+ ...| .+|..+|+++++ .+++++++||
T Consensus        90 ~~---------~~~~~~l~~aa~~~g~v~~~v~-S~--~g~~~~~~~~~~p~~~~y-~sK~~~e~~~~~-~~~~~~~lr~  155 (318)
T 2r6j_A           90 PQ---------ILDQFKILEAIKVAGNIKRFLP-SD--FGVEEDRINALPPFEALI-ERKRMIRRAIEE-ANIPYTYVSA  155 (318)
T ss_dssp             GG---------STTHHHHHHHHHHHCCCCEEEC-SC--CSSCTTTCCCCHHHHHHH-HHHHHHHHHHHH-TTCCBEEEEC
T ss_pred             hh---------hHHHHHHHHHHHhcCCCCEEEe-ec--cccCcccccCCCCcchhH-HHHHHHHHHHHh-cCCCeEEEEc
Confidence            42         456789999999998 999985 44  3421      112 2357 999999998865 8899999999


Q ss_pred             CeeecCCCCCccccCccccCchHHHHHHhcccCCCCCC--CCCccCCCccHHHHHHHHHHHhcCCCCCCCeeEeccc-cc
Q 023205          204 GFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPL--VGPLFTPPVNVTVVAKVAVRAATDPVFPPGIVDVHGI-LR  280 (286)
Q Consensus       204 ~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~l~~~-~~  280 (286)
                      +.+++..               ...+.......+.+..  .++...++++++|+|++++.++.++...++.|++.++ +.
T Consensus       156 ~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~~~g~~~~  220 (318)
T 2r6j_A          156 NCFASYF---------------INYLLRPYDPKDEITVYGTGEAKFAMNYEQDIGLYTIKVATDPRALNRVVIYRPSTNI  220 (318)
T ss_dssp             CEEHHHH---------------HHHHHCTTCCCSEEEEETTSCCEEEEECHHHHHHHHHHHTTCGGGTTEEEECCCGGGE
T ss_pred             ceehhhh---------------hhhhccccCCCCceEEecCCCceeeEeeHHHHHHHHHHHhcCccccCeEEEecCCCCc
Confidence            9887531               1222222112223332  3455789999999999999999887656788998875 67


Q ss_pred             cccc
Q 023205          281 YSQK  284 (286)
Q Consensus       281 ~s~~  284 (286)
                      +|++
T Consensus       221 ~s~~  224 (318)
T 2r6j_A          221 ITQL  224 (318)
T ss_dssp             EEHH
T ss_pred             cCHH
Confidence            7764

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.95  E-value=4.5e-28  Score=208.97  Aligned_cols=201  Identities=20%  Similarity=0.188  Sum_probs=153.0

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCC-Ccc----cc---cccCCceeEEeccCCCHhHHHHHhcCCCEEE
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSG-RSS----LR---DSWANNVIWHQGNLLSSDSWKEALDGVTAVI  126 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~-~~~----~~---~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi  126 (286)
                      ++|+|+||||||++|++++++|+++|++|++++|+. +..    ..   .....+++++.+|+.|++++.++++++|+||
T Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~~~l~~a~~~~d~vi   82 (321)
T 3c1o_A            3 HMEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHEKMVSVLKQVDIVI   82 (321)
T ss_dssp             -CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred             cccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCCHHHHHHHHcCCCEEE
Confidence            367899999999999999999999999999999986 211    10   0123579999999999999999999999999


Q ss_pred             EccccCCCcchhhhhhhHHHHHHHHHHHHcC-CCEEEEEecCCcCCC------Ccc-ccchHHHHHHHHHHHHHhCCCcE
Q 023205          127 SCVGGFGSNSYMYKINGTANINAIRAASEKG-VKRFVYISAADFGVA------NYL-LQGYYEGKRAAETELLTRYPYGG  198 (286)
Q Consensus       127 ~~a~~~~~~~~~~~~~~~~~~~l~~~a~~~~-v~~~v~~Ss~~~~~~------~~~-~~~y~~sK~~~E~~~~~~~g~~~  198 (286)
                      |+++...         +.++.+++++|++.+ +++||+ |+  ++..      ..+ ...| .+|..+|+++++ .++++
T Consensus        83 ~~a~~~~---------~~~~~~l~~aa~~~g~v~~~v~-S~--~g~~~~~~~~~~p~~~~y-~sK~~~e~~~~~-~~~~~  148 (321)
T 3c1o_A           83 SALPFPM---------ISSQIHIINAIKAAGNIKRFLP-SD--FGCEEDRIKPLPPFESVL-EKKRIIRRAIEA-AALPY  148 (321)
T ss_dssp             ECCCGGG---------SGGGHHHHHHHHHHCCCCEEEC-SC--CSSCGGGCCCCHHHHHHH-HHHHHHHHHHHH-HTCCB
T ss_pred             ECCCccc---------hhhHHHHHHHHHHhCCccEEec-cc--cccCccccccCCCcchHH-HHHHHHHHHHHH-cCCCe
Confidence            9998642         456789999999998 999983 43  4421      112 3468 999999998865 68999


Q ss_pred             EEEeeCeeecCCCCCccccCccccCchHHHHHHh---cccCCCCCC--CCCccCCCccHHHHHHHHHHHhcCCCCCCCee
Q 023205          199 VILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQH---AKPLSQLPL--VGPLFTPPVNVTVVAKVAVRAATDPVFPPGIV  273 (286)
Q Consensus       199 ~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~--~g~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~  273 (286)
                      +++||+.++++..               ..+...   ....+.++.  .++...++++++|+|++++.++.++...++.|
T Consensus       149 ~~lrp~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~g~~~  213 (321)
T 3c1o_A          149 TYVSANCFGAYFV---------------NYLLHPSPHPNRNDDIVIYGTGETKFVLNYEEDIAKYTIKVACDPRCCNRIV  213 (321)
T ss_dssp             EEEECCEEHHHHH---------------HHHHCCCSSCCTTSCEEEETTSCCEEEEECHHHHHHHHHHHHHCGGGTTEEE
T ss_pred             EEEEeceeccccc---------------cccccccccccccCceEEecCCCcceeEeeHHHHHHHHHHHHhCccccCeEE
Confidence            9999999986421               112111   111222332  34557899999999999999998877668889


Q ss_pred             Eeccc-cccccc
Q 023205          274 DVHGI-LRYSQK  284 (286)
Q Consensus       274 ~l~~~-~~~s~~  284 (286)
                      ++.++ +.+|++
T Consensus       214 ~~~g~~~~~t~~  225 (321)
T 3c1o_A          214 IYRPPKNIISQN  225 (321)
T ss_dssp             ECCCGGGEEEHH
T ss_pred             EEeCCCCcccHH
Confidence            99875 777765

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.95  E-value=1.7e-28  Score=210.26  Aligned_cols=203  Identities=22%  Similarity=0.217  Sum_probs=152.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcc--c------ccccCCceeEEeccCCCHhHHHHHhcCCCEEEE
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSS--L------RDSWANNVIWHQGNLLSSDSWKEALDGVTAVIS  127 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~--~------~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~  127 (286)
                      +++|+||||||++|++++++|+++|++|++++|+....  .      ......+++++++|+.|++++.++++++|+|||
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~   83 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDVVIS   83 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTCSEEEE
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHHHcCCCEEEE
Confidence            56899999999999999999999999999999986432  0      011246899999999999999999999999999


Q ss_pred             ccccCCCcchhhhhhhHHHHHHHHHHHHcC-CCEEEEEecCCcCCC------Ccc-ccchHHHHHHHHHHHHHhCCCcEE
Q 023205          128 CVGGFGSNSYMYKINGTANINAIRAASEKG-VKRFVYISAADFGVA------NYL-LQGYYEGKRAAETELLTRYPYGGV  199 (286)
Q Consensus       128 ~a~~~~~~~~~~~~~~~~~~~l~~~a~~~~-v~~~v~~Ss~~~~~~------~~~-~~~y~~sK~~~E~~~~~~~g~~~~  199 (286)
                      +++...         +.++.+++++|++++ +++||+ |+  ++..      ..+ ...| .+|..+|+++++ .+++++
T Consensus        84 ~a~~~~---------~~~~~~l~~aa~~~g~v~~~v~-S~--~g~~~~~~~~~~p~~~~y-~sK~~~e~~~~~-~~~~~~  149 (308)
T 1qyc_A           84 TVGSLQ---------IESQVNIIKAIKEVGTVKRFFP-SE--FGNDVDNVHAVEPAKSVF-EVKAKVRRAIEA-EGIPYT  149 (308)
T ss_dssp             CCCGGG---------SGGGHHHHHHHHHHCCCSEEEC-SC--CSSCTTSCCCCTTHHHHH-HHHHHHHHHHHH-HTCCBE
T ss_pred             CCcchh---------hhhHHHHHHHHHhcCCCceEee-cc--cccCccccccCCcchhHH-HHHHHHHHHHHh-cCCCeE
Confidence            998642         456678999999998 999985 54  3321      112 2457 999999998865 689999


Q ss_pred             EEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCC--CCCCccCCCccHHHHHHHHHHHhcCCCCCCCeeEecc
Q 023205          200 ILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLP--LVGPLFTPPVNVTVVAKVAVRAATDPVFPPGIVDVHG  277 (286)
Q Consensus       200 ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~l~~  277 (286)
                      ++||+.++|+........            .......+.++  ..++..+++++++|+|++++.++.++...++.|++.+
T Consensus       150 ~~r~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~~~g  217 (308)
T 1qyc_A          150 YVSSNCFAGYFLRSLAQA------------GLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPRTLNKTLYLRL  217 (308)
T ss_dssp             EEECCEEHHHHTTTTTCT------------TCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSCGGGTTEEEECCC
T ss_pred             EEEeceeccccccccccc------------cccCCCCCceEEecCCCceEEEecHHHHHHHHHHHHhCccccCeEEEEeC
Confidence            999999987532111000            00001112222  2345578999999999999999988766688999987


Q ss_pred             c-cccccc
Q 023205          278 I-LRYSQK  284 (286)
Q Consensus       278 ~-~~~s~~  284 (286)
                      + +.+|++
T Consensus       218 ~~~~~s~~  225 (308)
T 1qyc_A          218 PANTLSLN  225 (308)
T ss_dssp             GGGEEEHH
T ss_pred             CCCccCHH
Confidence            6 677765

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.95  E-value=8.5e-28  Score=205.83  Aligned_cols=203  Identities=22%  Similarity=0.236  Sum_probs=152.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCC-Ccc-----cc---cccCCceeEEeccCCCHhHHHHHhcCCCEEE
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSG-RSS-----LR---DSWANNVIWHQGNLLSSDSWKEALDGVTAVI  126 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~-~~~-----~~---~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi  126 (286)
                      +++|+||||||++|++++++|+++|++|++++|+. ...     ..   .....+++++++|+.|++++.++++++|+||
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~vi   81 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDHETLVKAIKQVDIVI   81 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhCCCEEE
Confidence            57899999999999999999999999999999986 111     00   1113578999999999999999999999999


Q ss_pred             EccccCCCcchhhhhhhHHHHHHHHHHHHcC-CCEEEEEecCCcCCC------Ccc-ccchHHHHHHHHHHHHHhCCCcE
Q 023205          127 SCVGGFGSNSYMYKINGTANINAIRAASEKG-VKRFVYISAADFGVA------NYL-LQGYYEGKRAAETELLTRYPYGG  198 (286)
Q Consensus       127 ~~a~~~~~~~~~~~~~~~~~~~l~~~a~~~~-v~~~v~~Ss~~~~~~------~~~-~~~y~~sK~~~E~~~~~~~g~~~  198 (286)
                      |+++...         +.++.+++++|++++ +++||+ |+  ++..      ..| ...| .+|..+|+++++ .++++
T Consensus        82 ~~a~~~~---------~~~~~~l~~aa~~~g~v~~~v~-S~--~g~~~~~~~~~~p~~~~y-~sK~~~e~~~~~-~~i~~  147 (307)
T 2gas_A           82 CAAGRLL---------IEDQVKIIKAIKEAGNVKKFFP-SE--FGLDVDRHDAVEPVRQVF-EEKASIRRVIEA-EGVPY  147 (307)
T ss_dssp             ECSSSSC---------GGGHHHHHHHHHHHCCCSEEEC-SC--CSSCTTSCCCCTTHHHHH-HHHHHHHHHHHH-HTCCB
T ss_pred             ECCcccc---------cccHHHHHHHHHhcCCceEEee-cc--cccCcccccCCCcchhHH-HHHHHHHHHHHH-cCCCe
Confidence            9998753         456789999999998 999984 43  3421      122 3467 999999998865 78999


Q ss_pred             EEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCC--CCCccCCCccHHHHHHHHHHHhcCCCCCCCeeEec
Q 023205          199 VILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPL--VGPLFTPPVNVTVVAKVAVRAATDPVFPPGIVDVH  276 (286)
Q Consensus       199 ~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~l~  276 (286)
                      +++||+.++++......           .. .......+.++.  .++..+++++++|+|++++.++.++...++.|++.
T Consensus       148 ~~lrp~~~~~~~~~~~~-----------~~-~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~~~  215 (307)
T 2gas_A          148 TYLCCHAFTGYFLRNLA-----------QL-DATDPPRDKVVILGDGNVKGAYVTEADVGTFTIRAANDPNTLNKAVHIR  215 (307)
T ss_dssp             EEEECCEETTTTGGGTT-----------CT-TCSSCCSSEEEEETTSCSEEEEECHHHHHHHHHHHHTCGGGTTEEEECC
T ss_pred             EEEEcceeecccccccc-----------cc-ccccCCCCeEEEecCCCcceEEeeHHHHHHHHHHHHcCccccCceEEEe
Confidence            99999999875431100           00 000011122222  34557899999999999999998877668889998


Q ss_pred             cc-cccccc
Q 023205          277 GI-LRYSQK  284 (286)
Q Consensus       277 ~~-~~~s~~  284 (286)
                      ++ +.+|++
T Consensus       216 ~~~~~~s~~  224 (307)
T 2gas_A          216 LPKNYLTQN  224 (307)
T ss_dssp             CGGGEEEHH
T ss_pred             CCCCcCCHH
Confidence            76 577764

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=99.95  E-value=3.1e-27  Score=196.87  Aligned_cols=207  Identities=11%  Similarity=0.022  Sum_probs=154.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhc----CCCEEEEcccc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD----GVTAVISCVGG  131 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~----~~d~vi~~a~~  131 (286)
                      ||+||||||+|+||++++++|+++|++|++++|+.++...        .+.+|+.|.++++++++    ++|+||||||.
T Consensus         1 Mk~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--------~~~~D~~~~~~~~~~~~~~~~~~d~vi~~Ag~   72 (255)
T 2dkn_A            1 MSVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEA--------DLSTPGGRETAVAAVLDRCGGVLDGLVCCAGV   72 (255)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC--------CTTSHHHHHHHHHHHHHHHTTCCSEEEECCCC
T ss_pred             CcEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccc--------cccCCcccHHHHHHHHHHcCCCccEEEECCCC
Confidence            4689999999999999999999999999999998755221        16789999999988886    79999999997


Q ss_pred             CC---CcchhhhhhhHHHHHHHHHHHHc----CCCEEEEEecC-CcCCC-------------------------Cccccc
Q 023205          132 FG---SNSYMYKINGTANINAIRAASEK----GVKRFVYISAA-DFGVA-------------------------NYLLQG  178 (286)
Q Consensus       132 ~~---~~~~~~~~~~~~~~~l~~~a~~~----~v~~~v~~Ss~-~~~~~-------------------------~~~~~~  178 (286)
                      ..   .....+++|+.++.++++++.+.    +.++||++||. .++..                         ..+...
T Consensus        73 ~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (255)
T 2dkn_A           73 GVTAANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAAELPMVEAMLAGDEARAIELAEQQGQTHLA  152 (255)
T ss_dssp             CTTSSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSTTGGGCHHHHHHHHTCHHHHHHHHHHHCCHHHH
T ss_pred             CCcchhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEeccccccccccccchhhhhcccchhhhhhhccccCCcchh
Confidence            54   33567899999999999987654    56899999994 33322                         034568


Q ss_pred             hHHHHHHHHHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccH
Q 023205          179 YYEGKRAAETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNV  252 (286)
Q Consensus       179 y~~sK~~~E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v  252 (286)
                      |+.+|...|.+++.      ..|++++++|||.++++......  +    .........      .+  .+ ...+++++
T Consensus       153 Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~~~~~--~----~~~~~~~~~------~~--~~-~~~~~~~~  217 (255)
T 2dkn_A          153 YAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQASK--A----DPRYGESTR------RF--VA-PLGRGSEP  217 (255)
T ss_dssp             HHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHHHHHH--H----CTTTHHHHH------SC--CC-TTSSCBCH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhhhhcc--c----chhhHHHHH------HH--HH-HhcCCCCH
Confidence            99999999997764      26999999999999986421100  0    000000000      00  01 23468999


Q ss_pred             HHHHHHHHHHhcCC--CCCCCeeEecccccccccC
Q 023205          253 TVVAKVAVRAATDP--VFPPGIVDVHGILRYSQKS  285 (286)
Q Consensus       253 ~Dva~~~~~~l~~~--~~~~~~~~l~~~~~~s~~~  285 (286)
                      +|+|++++.++..+  ...|+.|++.++..++.+.
T Consensus       218 ~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~e  252 (255)
T 2dkn_A          218 REVAEAIAFLLGPQASFIHGSVLFVDGGMDALMRA  252 (255)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEESTTHHHHHCT
T ss_pred             HHHHHHHHHHhCCCcccceeeEEEecCCeEeeeec
Confidence            99999999999876  3568999999998877553

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=99.94  E-value=3.4e-26  Score=193.71  Aligned_cols=219  Identities=16%  Similarity=0.078  Sum_probs=154.3

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc--cccCCceeEEeccCCCHhHHHHHhc-------CCCEE
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSWANNVIWHQGNLLSSDSWKEALD-------GVTAV  125 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~--~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d~v  125 (286)
                      ++++|+||||+|+||++++++|+++|++|++++|+.++...  .....+++++.+|++|.++++++++       ++|+|
T Consensus         4 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~l   83 (281)
T 3m1a_A            4 SAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYPDRAEAISLDVTDGERIDVVAADVLARYGRVDVL   83 (281)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCSEE
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCceEEEeeCCCHHHHHHHHHHHHHhCCCCCEE
Confidence            35789999999999999999999999999999998755321  2224589999999999999888776       68999


Q ss_pred             EEccccCCC----------cchhhhhhhHHHHHH----HHHHHHcCCCEEEEEecCCcCCCCccccchHHHHHHHHHHHH
Q 023205          126 ISCVGGFGS----------NSYMYKINGTANINA----IRAASEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELL  191 (286)
Q Consensus       126 i~~a~~~~~----------~~~~~~~~~~~~~~l----~~~a~~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~  191 (286)
                      |||||....          ....+++|+.++.++    ++.+++.+..+||++||........+...|+.+|...|.+.+
T Consensus        84 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~  163 (281)
T 3m1a_A           84 VNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERGSGSVVNISSFGGQLSFAGFSAYSATKAALEQLSE  163 (281)
T ss_dssp             EECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHHHHHHHHHH
T ss_pred             EECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCccccCCCCCchHHHHHHHHHHHHHH
Confidence            999986421          134678999995544    555566777899999996433444567789999999998775


Q ss_pred             H------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcC
Q 023205          192 T------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATD  265 (286)
Q Consensus       192 ~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~  265 (286)
                      .      ..|+++++++||.+.++.........................    + ..+.....+.+++|+|++++.+++.
T Consensus       164 ~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~~dva~a~~~~~~~  238 (281)
T 3m1a_A          164 GLADEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEENPAYAEKVGPTRQ----L-VQGSDGSQPGDPAKAAAAIRLALDT  238 (281)
T ss_dssp             HHHHHHGGGTEEEEEEEECCBCCTTTCCCCEEECCBCTTTHHHHHHHHH----H-HHC-----CBCHHHHHHHHHHHHHS
T ss_pred             HHHHHhhccCcEEEEEecCccccccccccccccCCcchhhHHHhHHHHH----H-HhhccCCCCCCHHHHHHHHHHHHhC
Confidence            3      368999999999998775432211101111111111111100    0 0011234578899999999999988


Q ss_pred             CCCCCCeeEecccc
Q 023205          266 PVFPPGIVDVHGIL  279 (286)
Q Consensus       266 ~~~~~~~~~l~~~~  279 (286)
                      +.. +..|+++++.
T Consensus       239 ~~~-~~~~~l~s~~  251 (281)
T 3m1a_A          239 EKT-PLRLALGGDA  251 (281)
T ss_dssp             SSC-CSEEEESHHH
T ss_pred             CCC-CeEEecCchH
Confidence            764 6788887764

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=99.94  E-value=1.1e-25  Score=187.73  Aligned_cols=211  Identities=14%  Similarity=0.114  Sum_probs=157.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc-----cccCCceeEEeccCCCHhHHHHHhc-------CCC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------GVT  123 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~-----~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d  123 (286)
                      .++|+||||+|+||++++++|+++|++|++++|+.++...     .....++.++.+|++|+++++++++       ++|
T Consensus        11 ~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   90 (255)
T 1fmc_A           11 GKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGKVD   90 (255)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSCC
T ss_pred             CCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhcCCCC
Confidence            5789999999999999999999999999999998643211     0113578899999999999988876       799


Q ss_pred             EEEEccccCCC---------cchhhhhhhHHHHHHHHHHH----HcCCCEEEEEecCCcCCCCccccchHHHHHHHHHHH
Q 023205          124 AVISCVGGFGS---------NSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEGKRAAETEL  190 (286)
Q Consensus       124 ~vi~~a~~~~~---------~~~~~~~~~~~~~~l~~~a~----~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~  190 (286)
                      +||||||....         ....+++|+.++.++++++.    +.+.++||++||........+...|+.+|...|.++
T Consensus        91 ~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~  170 (255)
T 1fmc_A           91 ILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLV  170 (255)
T ss_dssp             EEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCCCCcccHHHHHHHHHHH
Confidence            99999986532         13456899999998888874    456789999999643334456678999999999877


Q ss_pred             HH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhc
Q 023205          191 LT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAAT  264 (286)
Q Consensus       191 ~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~  264 (286)
                      +.      ..|++++++|||.++++...... .     ......+.   .   ..|     ...+++++|+|++++.++.
T Consensus       171 ~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~~~-~-----~~~~~~~~---~---~~~-----~~~~~~~~dva~~~~~l~~  233 (255)
T 1fmc_A          171 RNMAFDLGEKNIRVNGIAPGAILTDALKSVI-T-----PEIEQKML---Q---HTP-----IRRLGQPQDIANAALFLCS  233 (255)
T ss_dssp             HHHHHHHHTTTEEEEEEEECSBCSHHHHTTC-C-----HHHHHHHH---H---TCS-----SCSCBCHHHHHHHHHHHHS
T ss_pred             HHHHHHhhhcCcEEEEEecccCcchhhhhcc-C-----hHHHHHHH---h---cCC-----cccCCCHHHHHHHHHHHhC
Confidence            53      35899999999999876432110 0     01111111   1   111     1347899999999999997


Q ss_pred             CCC--CCCCeeEecccccccc
Q 023205          265 DPV--FPPGIVDVHGILRYSQ  283 (286)
Q Consensus       265 ~~~--~~~~~~~l~~~~~~s~  283 (286)
                      .+.  ..|++|++.++..++.
T Consensus       234 ~~~~~~~G~~~~v~gg~~~s~  254 (255)
T 1fmc_A          234 PAASWVSGQILTVSGGGVQEL  254 (255)
T ss_dssp             GGGTTCCSCEEEESTTSCCCC
T ss_pred             CccccCCCcEEEECCceeccC
Confidence            643  3588999999987765

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.94  E-value=1.2e-25  Score=185.86  Aligned_cols=203  Identities=19%  Similarity=0.186  Sum_probs=153.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhc------CCCEEEEcc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD------GVTAVISCV  129 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~------~~d~vi~~a  129 (286)
                      +++|+||||+|+||++++++|+++|++|++++|+.+       ..++.++.+|++|+++++++++      ++|+|||||
T Consensus         2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-------~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~li~~a   74 (242)
T 1uay_A            2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-------GEDLIYVEGDVTREEDVRRAVARAQEEAPLFAVVSAA   74 (242)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-------SSSSEEEECCTTCHHHHHHHHHHHHHHSCEEEEEECC
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-------ccceEEEeCCCCCHHHHHHHHHHHHhhCCceEEEEcc
Confidence            578999999999999999999999999999999865       1356899999999999998887      789999999


Q ss_pred             ccCC--------------CcchhhhhhhHHHHHHHHHHHHcCC----------CEEEEEecCCcCCCCccccchHHHHHH
Q 023205          130 GGFG--------------SNSYMYKINGTANINAIRAASEKGV----------KRFVYISAADFGVANYLLQGYYEGKRA  185 (286)
Q Consensus       130 ~~~~--------------~~~~~~~~~~~~~~~l~~~a~~~~v----------~~~v~~Ss~~~~~~~~~~~~y~~sK~~  185 (286)
                      |...              .....+++|+.++.++++++.+...          .+||++||........+...|+.+|..
T Consensus        75 g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a  154 (242)
T 1uay_A           75 GVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAYAASKGG  154 (242)
T ss_dssp             CCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTTCHHHHHHHHH
T ss_pred             cccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCCCCchhhHHHHH
Confidence            8643              1234568999999999998875421          289999996322233456789999999


Q ss_pred             HHHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHH
Q 023205          186 AETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVA  259 (286)
Q Consensus       186 ~E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~  259 (286)
                      .|.+.+.      ..|++++++|||.++++.....        .   ..+......  ..|..    ..+++++|+|+++
T Consensus       155 ~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~--------~---~~~~~~~~~--~~~~~----~~~~~~~dva~~~  217 (242)
T 1uay_A          155 VVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGL--------P---EKAKASLAA--QVPFP----PRLGRPEEYAALV  217 (242)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTS--------C---HHHHHHHHT--TCCSS----CSCCCHHHHHHHH
T ss_pred             HHHHHHHHHHHHhhcCcEEEEEEeccCcchhhhcc--------c---hhHHHHHHh--hCCCc----ccCCCHHHHHHHH
Confidence            9987643      3589999999999987643211        0   111111111  11210    2468999999999


Q ss_pred             HHHhcCCCCCCCeeEeccccccc
Q 023205          260 VRAATDPVFPPGIVDVHGILRYS  282 (286)
Q Consensus       260 ~~~l~~~~~~~~~~~l~~~~~~s  282 (286)
                      +.++..+...|+.|++.|+..++
T Consensus       218 ~~l~~~~~~~G~~~~v~gG~~~~  240 (242)
T 1uay_A          218 LHILENPMLNGEVVRLDGALRMA  240 (242)
T ss_dssp             HHHHHCTTCCSCEEEESTTCCCC
T ss_pred             HHHhcCCCCCCcEEEEcCCeecC
Confidence            99998866678999999987654

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=99.94  E-value=1.8e-24  Score=181.07  Aligned_cols=203  Identities=14%  Similarity=0.114  Sum_probs=156.9

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhc-------CCCEEEE
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD-------GVTAVIS  127 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d~vi~  127 (286)
                      ++++||||||+|+||++++++|+++|++|++++|+..+..    ..++.++.+|++|+++++++++       ++|++||
T Consensus        27 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~----~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~  102 (260)
T 3un1_A           27 QQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSA----DPDIHTVAGDISKPETADRIVREGIERFGRIDSLVN  102 (260)
T ss_dssp             TCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCS----STTEEEEESCTTSHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhcc----cCceEEEEccCCCHHHHHHHHHHHHHHCCCCCEEEE
Confidence            3578999999999999999999999999999999865422    2478999999999999888876       7899999


Q ss_pred             ccccCCC----------cchhhhhhhHHHHHHHHHH----HHcCCCEEEEEecCCcC--CCCccccchHHHHHHHHHHHH
Q 023205          128 CVGGFGS----------NSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFG--VANYLLQGYYEGKRAAETELL  191 (286)
Q Consensus       128 ~a~~~~~----------~~~~~~~~~~~~~~l~~~a----~~~~v~~~v~~Ss~~~~--~~~~~~~~y~~sK~~~E~~~~  191 (286)
                      |||....          ....+++|+.++.++++++    ++.+..+||++||....  ....+...|+.+|...+.+.+
T Consensus       103 nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~~Y~~sKaa~~~l~~  182 (260)
T 3un1_A          103 NAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLVDQPMVGMPSALASLTKGGLNAVTR  182 (260)
T ss_dssp             CCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCTTTTSCBTTCCCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechhhccCCCCCccHHHHHHHHHHHHHHH
Confidence            9986531          2356789999999998887    45667799999995322  233456789999999998775


Q ss_pred             H------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcC
Q 023205          192 T------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATD  265 (286)
Q Consensus       192 ~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~  265 (286)
                      .      ..|+++++++||.+.++.....          ....+..      ..|     ...+.+++|+|++++.+...
T Consensus       183 ~la~e~~~~gI~vn~v~PG~v~t~~~~~~----------~~~~~~~------~~p-----~~r~~~~~dva~av~~L~~~  241 (260)
T 3un1_A          183 SLAMEFSRSGVRVNAVSPGVIKTPMHPAE----------THSTLAG------LHP-----VGRMGEIRDVVDAVLYLEHA  241 (260)
T ss_dssp             HHHHHTTTTTEEEEEEEECCBCCTTSCGG----------GHHHHHT------TST-----TSSCBCHHHHHHHHHHHHHC
T ss_pred             HHHHHhCcCCeEEEEEeecCCCCCCCCHH----------HHHHHhc------cCC-----CCCCcCHHHHHHHHHHhccc
Confidence            3      3589999999999998754211          1111111      111     23567899999999999666


Q ss_pred             CCCCCCeeEeccccccc
Q 023205          266 PVFPPGIVDVHGILRYS  282 (286)
Q Consensus       266 ~~~~~~~~~l~~~~~~s  282 (286)
                      ....|+++++.|+...+
T Consensus       242 ~~itG~~i~vdGG~~~~  258 (260)
T 3un1_A          242 GFITGEILHVDGGQNAG  258 (260)
T ss_dssp             TTCCSCEEEESTTGGGC
T ss_pred             CCCCCcEEEECCCeecc
Confidence            66679999999987654

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=99.93  E-value=4.2e-25  Score=186.55  Aligned_cols=218  Identities=13%  Similarity=0.119  Sum_probs=159.4

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc---cc-cCCceeEEeccCCCHhHHHHHhc-------CCC
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR---DS-WANNVIWHQGNLLSSDSWKEALD-------GVT  123 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~---~~-~~~~~~~i~~Dl~d~~~~~~~~~-------~~d  123 (286)
                      ..++|+||||+|+||++++++|+++|++|++++|+......   +. ...++.++.+|++|+++++++++       ++|
T Consensus        15 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   94 (278)
T 2bgk_A           15 QDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLD   94 (278)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             cCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            35789999999999999999999999999999997543211   11 11278999999999999988876       789


Q ss_pred             EEEEccccCCC------------cchhhhhhhHHHHHHHHHHHH----cCCCEEEEEecCC-cCCCCccccchHHHHHHH
Q 023205          124 AVISCVGGFGS------------NSYMYKINGTANINAIRAASE----KGVKRFVYISAAD-FGVANYLLQGYYEGKRAA  186 (286)
Q Consensus       124 ~vi~~a~~~~~------------~~~~~~~~~~~~~~l~~~a~~----~~v~~~v~~Ss~~-~~~~~~~~~~y~~sK~~~  186 (286)
                      +||||||....            ....+++|+.++.++++++..    .+.++||++||.. +.....+...|+.+|...
T Consensus        95 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~Y~~sK~a~  174 (278)
T 2bgk_A           95 IMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTATKHAV  174 (278)
T ss_dssp             EEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTTSCHHHHHHHHHH
T ss_pred             EEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeeccccCCCCCCCcchHHHHHHH
Confidence            99999986531            134678999999999988865    3567999999953 332222567899999999


Q ss_pred             HHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHH
Q 023205          187 ETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAV  260 (286)
Q Consensus       187 E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~  260 (286)
                      |.+++.      ..|++++++|||.++++........    .......+....    +     .....+++++|+|++++
T Consensus       175 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~----~~~~~~~~~~~~----~-----~~~~~~~~~~dva~~~~  241 (278)
T 2bgk_A          175 LGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGV----DSSRVEELAHQA----A-----NLKGTLLRAEDVADAVA  241 (278)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSC----CHHHHHHHHHHT----C-----SSCSCCCCHHHHHHHHH
T ss_pred             HHHHHHHHHHHhhcCcEEEEEEeceecchhhhhhccc----chhHHHHhhhcc----c-----ccccccCCHHHHHHHHH
Confidence            987753      3689999999999998864322100    001111111110    1     11235789999999999


Q ss_pred             HHhcCC--CCCCCeeEecccccccccC
Q 023205          261 RAATDP--VFPPGIVDVHGILRYSQKS  285 (286)
Q Consensus       261 ~~l~~~--~~~~~~~~l~~~~~~s~~~  285 (286)
                      .++..+  ...|+.|++.|+..+++++
T Consensus       242 ~l~~~~~~~~~G~~~~v~gg~~~~~~e  268 (278)
T 2bgk_A          242 YLAGDESKYVSGLNLVIDGGYTRTNPA  268 (278)
T ss_dssp             HHHSGGGTTCCSCEEEESTTGGGCCTH
T ss_pred             HHcCcccccCCCCEEEECCcccccCCc
Confidence            999753  3458999999998888753

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=99.93  E-value=3.6e-25  Score=183.45  Aligned_cols=210  Identities=13%  Similarity=-0.004  Sum_probs=153.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCccccc-ccCCceeEEeccCCCHhHHHHHhc---CCCEEEEcccc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRD-SWANNVIWHQGNLLSSDSWKEALD---GVTAVISCVGG  131 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~-~~~~~~~~i~~Dl~d~~~~~~~~~---~~d~vi~~a~~  131 (286)
                      .++|+||||+|+||++++++|+++|++|++++|+.++.... ....+++++.+|++|+++++++++   .+|+||||||.
T Consensus         7 ~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~Ag~   86 (244)
T 1cyd_A            7 GLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGIGPVDLLVNNAAL   86 (244)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCSEEEECCCC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCCcEEecCCCHHHHHHHHHHcCCCCEEEECCcc
Confidence            57899999999999999999999999999999986442110 012467888999999999999886   47999999996


Q ss_pred             CCC----------cchhhhhhhHHHHHHHHHHHHc----C-CCEEEEEecCCcCCCCccccchHHHHHHHHHHHHH----
Q 023205          132 FGS----------NSYMYKINGTANINAIRAASEK----G-VKRFVYISAADFGVANYLLQGYYEGKRAAETELLT----  192 (286)
Q Consensus       132 ~~~----------~~~~~~~~~~~~~~l~~~a~~~----~-v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~~----  192 (286)
                      ...          ....+++|+.++.++++++.+.    + .++||++||........+...|+.+|...|.+++.    
T Consensus        87 ~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~  166 (244)
T 1cyd_A           87 VIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAMAME  166 (244)
T ss_dssp             CCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHH
T ss_pred             cCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcCCCCCcchhHHHHHHHHHHHHHHHHH
Confidence            431          1246789999999888887653    4 57999999953323334567899999999997753    


Q ss_pred             --hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcCCC--C
Q 023205          193 --RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDPV--F  268 (286)
Q Consensus       193 --~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~~--~  268 (286)
                        ..|++++++|||.++++........     ......+...      .     ...++++++|+|++++.++..+.  .
T Consensus       167 ~~~~gi~v~~v~pg~v~t~~~~~~~~~-----~~~~~~~~~~------~-----~~~~~~~~~dva~~~~~l~~~~~~~~  230 (244)
T 1cyd_A          167 LGPHKIRVNSVNPTVVLTDMGKKVSAD-----PEFARKLKER------H-----PLRKFAEVEDVVNSILFLLSDRSAST  230 (244)
T ss_dssp             HGGGTEEEEEEEECCBTTHHHHHHTCC-----HHHHHHHHHH------S-----TTSSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             hhhcCeEEEEEecCcccCccccccccC-----HHHHHHHHhc------C-----CccCCCCHHHHHHHHHHHhCchhhcc
Confidence              3689999999999988643211000     0111111111      1     12468999999999999997643  4


Q ss_pred             CCCeeEecccccc
Q 023205          269 PPGIVDVHGILRY  281 (286)
Q Consensus       269 ~~~~~~l~~~~~~  281 (286)
                      .|+.+++.|+...
T Consensus       231 ~G~~~~v~gG~~~  243 (244)
T 1cyd_A          231 SGGGILVDAGYLA  243 (244)
T ss_dssp             CSSEEEESTTGGG
T ss_pred             cCCEEEECCCccC
Confidence            5789999887644

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=99.93  E-value=5.7e-25  Score=177.10  Aligned_cols=179  Identities=14%  Similarity=0.049  Sum_probs=140.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcC---CCEEEEccccC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDG---VTAVISCVGGF  132 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~---~d~vi~~a~~~  132 (286)
                      +|+|+||||+|+||++++++|+ +|++|++++|+..            ++.+|++|++++++++++   +|+||||||..
T Consensus         3 kM~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~------------~~~~D~~~~~~~~~~~~~~~~~d~vi~~ag~~   69 (202)
T 3d7l_A            3 AMKILLIGASGTLGSAVKERLE-KKAEVITAGRHSG------------DVTVDITNIDSIKKMYEQVGKVDAIVSATGSA   69 (202)
T ss_dssp             SCEEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS------------SEECCTTCHHHHHHHHHHHCCEEEEEECCCCC
T ss_pred             CcEEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc------------ceeeecCCHHHHHHHHHHhCCCCEEEECCCCC
Confidence            3589999999999999999999 9999999999853            468999999999988875   89999999864


Q ss_pred             CCc----------chhhhhhhHHHHHHHHHHHHc---CCCEEEEEecCCcCCCCccccchHHHHHHHHHHHHH-----hC
Q 023205          133 GSN----------SYMYKINGTANINAIRAASEK---GVKRFVYISAADFGVANYLLQGYYEGKRAAETELLT-----RY  194 (286)
Q Consensus       133 ~~~----------~~~~~~~~~~~~~l~~~a~~~---~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~~-----~~  194 (286)
                      ...          ...+++|+.++.++++++.+.   + ++||++||........+...|+.+|...|.+++.     ..
T Consensus        70 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~iv~~sS~~~~~~~~~~~~Y~~sK~~~~~~~~~~~~e~~~  148 (202)
T 3d7l_A           70 TFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDK-GSFTLTTGIMMEDPIVQGASAAMANGAVTAFAKSAAIEMPR  148 (202)
T ss_dssp             CCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEE-EEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHTTSCST
T ss_pred             CCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccC-CEEEEEcchhhcCCCCccHHHHHHHHHHHHHHHHHHHHccC
Confidence            311          245579999999999999775   4 6899999953333334567899999999998765     24


Q ss_pred             CCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcCCCCCCCeeE
Q 023205          195 PYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDPVFPPGIVD  274 (286)
Q Consensus       195 g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~  274 (286)
                      |++++++|||.++++...                   ...   .     ....++++++|+|++++.++.. ...|++|+
T Consensus       149 gi~v~~v~pg~v~~~~~~-------------------~~~---~-----~~~~~~~~~~dva~~~~~~~~~-~~~G~~~~  200 (202)
T 3d7l_A          149 GIRINTVSPNVLEESWDK-------------------LEP---F-----FEGFLPVPAAKVARAFEKSVFG-AQTGESYQ  200 (202)
T ss_dssp             TCEEEEEEECCBGGGHHH-------------------HGG---G-----STTCCCBCHHHHHHHHHHHHHS-CCCSCEEE
T ss_pred             CeEEEEEecCccCCchhh-------------------hhh---h-----ccccCCCCHHHHHHHHHHhhhc-cccCceEe
Confidence            899999999999876320                   000   0     1134689999999999998853 44578888


Q ss_pred             ec
Q 023205          275 VH  276 (286)
Q Consensus       275 l~  276 (286)
                      +.
T Consensus       201 vd  202 (202)
T 3d7l_A          201 VY  202 (202)
T ss_dssp             EC
T ss_pred             cC
Confidence            73

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=99.93  E-value=1.7e-24  Score=181.08  Aligned_cols=210  Identities=15%  Similarity=0.092  Sum_probs=152.7

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhc-------CCCEEEE
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD-------GVTAVIS  127 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d~vi~  127 (286)
                      ..++||||||+|+||++++++|+++|++|++++|+.++........++.++.+|++|+++++++++       .+|+|||
T Consensus        26 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~  105 (260)
T 3gem_A           26 SSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQAGAVALYGDFSCETGIMAFIDLLKTQTSSLRAVVH  105 (260)
T ss_dssp             -CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHHHTCEEEECCTTSHHHHHHHHHHHHHHCSCCSEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhcCCeEEECCCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence            357899999999999999999999999999999997653222222358899999999998887775       5899999


Q ss_pred             ccccCCC---------cchhhhhhhHHHHHHHHHHHH----cCCCEEEEEecCCcCCCCccccchHHHHHHHHHHHHH--
Q 023205          128 CVGGFGS---------NSYMYKINGTANINAIRAASE----KGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLT--  192 (286)
Q Consensus       128 ~a~~~~~---------~~~~~~~~~~~~~~l~~~a~~----~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~~--  192 (286)
                      |||....         ....+++|+.++.++++++..    .+..+||++||............|+.+|...+.+.+.  
T Consensus       106 nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la  185 (260)
T 3gem_A          106 NASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRKGSSKHIAYCATKAGLESLTLSFA  185 (260)
T ss_dssp             CCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGTCCSSCHHHHHHHHHHHHHHHHHH
T ss_pred             CCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCCCcHhHHHHHHHHHHHHHHHH
Confidence            9996532         124678999999998887753    4557999999954333344567899999999987653  


Q ss_pred             ---hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcCCCCC
Q 023205          193 ---RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDPVFP  269 (286)
Q Consensus       193 ---~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~~~~  269 (286)
                         ..++++++++||.+..+.....         .    .....  ....|     ...+.+++|+|++++.++..+...
T Consensus       186 ~e~~~~Irvn~v~PG~v~t~~~~~~---------~----~~~~~--~~~~p-----~~r~~~~edva~~v~~L~~~~~it  245 (260)
T 3gem_A          186 ARFAPLVKVNGIAPALLMFQPKDDA---------A----YRANA--LAKSA-----LGIEPGAEVIYQSLRYLLDSTYVT  245 (260)
T ss_dssp             HHHTTTCEEEEEEECTTCC------------------------------CC-----SCCCCCTHHHHHHHHHHHHCSSCC
T ss_pred             HHHCCCCEEEEEeecccccCCCCCH---------H----HHHHH--HhcCC-----CCCCCCHHHHHHHHHHHhhCCCCC
Confidence               2369999999999976532110         0    00000  01111     123567899999999999777778


Q ss_pred             CCeeEeccccccccc
Q 023205          270 PGIVDVHGILRYSQK  284 (286)
Q Consensus       270 ~~~~~l~~~~~~s~~  284 (286)
                      |+++++.|+..++++
T Consensus       246 G~~i~vdGG~~~~~s  260 (260)
T 3gem_A          246 GTTLTVNGGRHVKGS  260 (260)
T ss_dssp             SCEEEESTTTTTC--
T ss_pred             CCEEEECCCcccCCC
Confidence            999999999887653

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=99.93  E-value=4.5e-24  Score=176.86  Aligned_cols=210  Identities=14%  Similarity=0.056  Sum_probs=154.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCccccc-ccCCceeEEeccCCCHhHHHHHhc---CCCEEEEcccc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRD-SWANNVIWHQGNLLSSDSWKEALD---GVTAVISCVGG  131 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~-~~~~~~~~i~~Dl~d~~~~~~~~~---~~d~vi~~a~~  131 (286)
                      .++|+||||+|+||++++++|+++|++|++++|+.++.... ....+++++.+|++|+++++++++   ++|+||||||.
T Consensus         7 ~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~Ag~   86 (244)
T 3d3w_A            7 GRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSVGPVDLLVNNAAV   86 (244)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCCEEEECCCC
T ss_pred             CcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCCEEEEeCCCHHHHHHHHHHcCCCCEEEECCcc
Confidence            57899999999999999999999999999999986432110 011367888999999999999886   48999999986


Q ss_pred             CCC----------cchhhhhhhHHHHHHHHHHHH----cC-CCEEEEEecCCcCCCCccccchHHHHHHHHHHHHH----
Q 023205          132 FGS----------NSYMYKINGTANINAIRAASE----KG-VKRFVYISAADFGVANYLLQGYYEGKRAAETELLT----  192 (286)
Q Consensus       132 ~~~----------~~~~~~~~~~~~~~l~~~a~~----~~-v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~~----  192 (286)
                      ...          ....+++|+.++.++++++.+    .+ .++||++||........+...|+.+|...|.+++.    
T Consensus        87 ~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e  166 (244)
T 3d3w_A           87 ALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALE  166 (244)
T ss_dssp             CCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhccCCCCCchHHHHHHHHHHHHHHHHHH
Confidence            532          134678999999988887754    34 57999999954333344567899999999997753    


Q ss_pred             --hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcCC--CC
Q 023205          193 --RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDP--VF  268 (286)
Q Consensus       193 --~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~--~~  268 (286)
                        ..|++++++|||.++++.....+..     ......+..      ..|     ...+++++|+|++++.++..+  ..
T Consensus       167 ~~~~~i~v~~v~Pg~v~t~~~~~~~~~-----~~~~~~~~~------~~~-----~~~~~~~~dva~~~~~l~~~~~~~~  230 (244)
T 3d3w_A          167 LGPHKIRVNAVNPTVVMTSMGQATWSD-----PHKAKTMLN------RIP-----LGKFAEVEHVVNAILFLLSDRSGMT  230 (244)
T ss_dssp             HGGGTEEEEEEEECCBTTTTHHHHSCS-----TTHHHHHHH------TCT-----TCSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             hcccCeEEEEEEeccccccchhhhccC-----hHHHHHHHh------hCC-----CCCCcCHHHHHHHHHHHcCccccCC
Confidence              3689999999999988753211100     111111111      111     235789999999999999754  34


Q ss_pred             CCCeeEecccccc
Q 023205          269 PPGIVDVHGILRY  281 (286)
Q Consensus       269 ~~~~~~l~~~~~~  281 (286)
                      .|+.|++.++...
T Consensus       231 ~G~~~~v~gG~~~  243 (244)
T 3d3w_A          231 TGSTLPVEGGFWA  243 (244)
T ss_dssp             CSCEEEESTTGGG
T ss_pred             CCCEEEECCCccC
Confidence            5889999987654

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=99.93  E-value=4.8e-24  Score=177.25  Aligned_cols=209  Identities=19%  Similarity=0.137  Sum_probs=151.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc------cccCCceeEEeccCCCHhHHHHHhc-------CC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD-------GV  122 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~------~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~  122 (286)
                      +++|+||||+|+||++++++|+++|++|++++|+.++...      .....++.++.+|++|+++++++++       ++
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGAI   81 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            5789999999999999999999999999999998643211      1113468999999999999888876       78


Q ss_pred             CEEEEccccCCC-------------cchhhhhhhHHHHHHHHHH----HHcCCCEEEEEecCCcCCCCccccchHHHHHH
Q 023205          123 TAVISCVGGFGS-------------NSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKRA  185 (286)
Q Consensus       123 d~vi~~a~~~~~-------------~~~~~~~~~~~~~~l~~~a----~~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~  185 (286)
                      |+||||||....             ....+++|+.++.++++.+    ++.+.++||++||........+...|+.+|..
T Consensus        82 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a  161 (250)
T 2cfc_A           82 DVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLVAFPGRSAYTTSKGA  161 (250)
T ss_dssp             CEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred             CEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCCCchhHHHHHHH
Confidence            999999986431             1245678999987766655    34567899999995322233456789999999


Q ss_pred             HHHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHH
Q 023205          186 AETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVA  259 (286)
Q Consensus       186 ~E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~  259 (286)
                      .|.+.+.      ..|++++++|||.++++......       .. .........   ..|.     ..+.+++|+|+++
T Consensus       162 ~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~-------~~-~~~~~~~~~---~~~~-----~~~~~~~dva~~~  225 (250)
T 2cfc_A          162 VLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQWRL-------DQ-PELRDQVLA---RIPQ-----KEIGTAAQVADAV  225 (250)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTHHHH-------TS-HHHHHHHHT---TCTT-----CSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHhcccCeEEEEEEeCcCccCcccccc-------CC-HHHHHHHHh---cCCC-----CCCcCHHHHHHHH
Confidence            9987753      34899999999999987642100       00 011111111   1121     2468999999999


Q ss_pred             HHHhcCCC--CCCCeeEeccccc
Q 023205          260 VRAATDPV--FPPGIVDVHGILR  280 (286)
Q Consensus       260 ~~~l~~~~--~~~~~~~l~~~~~  280 (286)
                      +.++..+.  ..|+.+++.|+..
T Consensus       226 ~~l~~~~~~~~~G~~~~v~gG~~  248 (250)
T 2cfc_A          226 MFLAGEDATYVNGAALVMDGAYT  248 (250)
T ss_dssp             HHHHSTTCTTCCSCEEEESTTGG
T ss_pred             HHHcCchhhcccCCEEEECCcee
Confidence            99998653  3588999988753

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=99.93  E-value=8.3e-25  Score=183.34  Aligned_cols=212  Identities=20%  Similarity=0.141  Sum_probs=149.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc---cc--cC-------CceeEEeccCCCHhHHHHHhcC--
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR---DS--WA-------NNVIWHQGNLLSSDSWKEALDG--  121 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~---~~--~~-------~~~~~i~~Dl~d~~~~~~~~~~--  121 (286)
                      .++|+||||+|+||++++++|+++|++|++++|+.++...   ..  ..       .++.++.+|++|.+++++++++  
T Consensus         7 ~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   86 (264)
T 2pd6_A            7 SALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLEQVQ   86 (264)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHHHHH
Confidence            5789999999999999999999999999999998644211   00  01       4688999999999988887765  


Q ss_pred             -----C-CEEEEccccCCC----------cchhhhhhhHHHHHHHHHHHHc----C-CCEEEEEecCCcCCCCccccchH
Q 023205          122 -----V-TAVISCVGGFGS----------NSYMYKINGTANINAIRAASEK----G-VKRFVYISAADFGVANYLLQGYY  180 (286)
Q Consensus       122 -----~-d~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~~~----~-v~~~v~~Ss~~~~~~~~~~~~y~  180 (286)
                           + |+||||||....          ....+++|+.++.++++++.+.    + ..+||++||........+...|+
T Consensus        87 ~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  166 (264)
T 2pd6_A           87 ACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNVGQTNYA  166 (264)
T ss_dssp             HHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHCCTTBHHHH
T ss_pred             HHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhccCCCCChhhH
Confidence                 3 999999986532          1346789999999999887653    4 46999999953222234567899


Q ss_pred             HHHHHHHHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHH
Q 023205          181 EGKRAAETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTV  254 (286)
Q Consensus       181 ~sK~~~E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D  254 (286)
                      .+|...|.+.+.      ..|++++++|||.++++.....           ...+.....  ...|     ...+++++|
T Consensus       167 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-----------~~~~~~~~~--~~~~-----~~~~~~~~d  228 (264)
T 2pd6_A          167 ASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQKV-----------PQKVVDKIT--EMIP-----MGHLGDPED  228 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC---------------------CTG--GGCT-----TCSCBCHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccchhhc-----------CHHHHHHHH--HhCC-----CCCCCCHHH
Confidence            999999987653      3689999999999998754211           000111100  0111     124689999


Q ss_pred             HHHHHHHHhcCC--CCCCCeeEecccccccccC
Q 023205          255 VAKVAVRAATDP--VFPPGIVDVHGILRYSQKS  285 (286)
Q Consensus       255 va~~~~~~l~~~--~~~~~~~~l~~~~~~s~~~  285 (286)
                      +|++++.++..+  ...|+.+++.|+..++++.
T Consensus       229 va~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~~  261 (264)
T 2pd6_A          229 VADVVAFLASEDSGYITGTSVEVTGGLFMAENL  261 (264)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESTTC------
T ss_pred             HHHHHHHHcCCcccCCCCCEEEECCCceecccc
Confidence            999999999753  3568999999998877653

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=99.92  E-value=3.5e-24  Score=179.01  Aligned_cols=211  Identities=17%  Similarity=0.189  Sum_probs=151.1

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc--cccCCceeEEeccCCCHhHHHHHhc-------CCCEE
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSWANNVIWHQGNLLSSDSWKEALD-------GVTAV  125 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~--~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d~v  125 (286)
                      ..++++||||+|+||++++++|+++|++|++++|+.++...  .....++.++.+|++|+++++++++       ++|++
T Consensus         6 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l   85 (257)
T 3tpc_A            6 KSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELGAAVRFRNADVTNEADATAALAFAKQEFGHVHGL   85 (257)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC------------CEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            35789999999999999999999999999999998765322  2223578999999999999888876       78999


Q ss_pred             EEccccCCC--------------cchhhhhhhHHHHHHHHHHHHc----------CCCEEEEEecCCcCCCCccccchHH
Q 023205          126 ISCVGGFGS--------------NSYMYKINGTANINAIRAASEK----------GVKRFVYISAADFGVANYLLQGYYE  181 (286)
Q Consensus       126 i~~a~~~~~--------------~~~~~~~~~~~~~~l~~~a~~~----------~v~~~v~~Ss~~~~~~~~~~~~y~~  181 (286)
                      |||||....              +...+++|+.++.++++++...          +..+||++||...-........|+.
T Consensus        86 v~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a  165 (257)
T 3tpc_A           86 VNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQIGQAAYAA  165 (257)
T ss_dssp             EECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCTTCHHHHH
T ss_pred             EECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhccCCCCCcchHH
Confidence            999997521              1245689999999999988653          3457999999532223345678999


Q ss_pred             HHHHHHHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHH
Q 023205          182 GKRAAETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVV  255 (286)
Q Consensus       182 sK~~~E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dv  255 (286)
                      +|...+.+.+.      ..|+++++++||.+.++......           +.......  ...|.    ...+.+++|+
T Consensus       166 sKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~-----------~~~~~~~~--~~~p~----~~r~~~~~dv  228 (257)
T 3tpc_A          166 SKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMMAGMP-----------QDVQDALA--ASVPF----PPRLGRAEEY  228 (257)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC---------------------------CCSSS----SCSCBCHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhhccCC-----------HHHHHHHH--hcCCC----CCCCCCHHHH
Confidence            99999987642      47899999999999876532110           00111111  11221    1357899999


Q ss_pred             HHHHHHHhcCCCCCCCeeEeccccccc
Q 023205          256 AKVAVRAATDPVFPPGIVDVHGILRYS  282 (286)
Q Consensus       256 a~~~~~~l~~~~~~~~~~~l~~~~~~s  282 (286)
                      |++++.++......|+++++.|+..++
T Consensus       229 a~~v~~l~s~~~itG~~i~vdGG~~~~  255 (257)
T 3tpc_A          229 AALVKHICENTMLNGEVIRLDGALRMA  255 (257)
T ss_dssp             HHHHHHHHHCTTCCSCEEEESTTCCC-
T ss_pred             HHHHHHHcccCCcCCcEEEECCCccCC
Confidence            999999998766789999999987654

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.92  E-value=1.4e-24  Score=183.53  Aligned_cols=220  Identities=13%  Similarity=0.017  Sum_probs=152.4

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc--------cccCCceeEEeccCCCHhHHHHHhc------
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--------DSWANNVIWHQGNLLSSDSWKEALD------  120 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~--------~~~~~~~~~i~~Dl~d~~~~~~~~~------  120 (286)
                      +.++|+||||+|+||++++++|+++|++|++++|+.++...        .....++.++.+|++|+++++++++      
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (278)
T 1spx_A            5 AEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKF   84 (278)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHHHc
Confidence            35789999999999999999999999999999998643211        1112468899999999999888876      


Q ss_pred             -CCCEEEEccccCCC--------------cchhhhhhhHHHHHHHHHHHHc----CCCEEEEEecCCc-CCCCccccchH
Q 023205          121 -GVTAVISCVGGFGS--------------NSYMYKINGTANINAIRAASEK----GVKRFVYISAADF-GVANYLLQGYY  180 (286)
Q Consensus       121 -~~d~vi~~a~~~~~--------------~~~~~~~~~~~~~~l~~~a~~~----~v~~~v~~Ss~~~-~~~~~~~~~y~  180 (286)
                       ++|+||||||....              ....+++|+.++.++++++...    + .+||++||... .........|+
T Consensus        85 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~~Y~  163 (278)
T 1spx_A           85 GKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIASGLHATPDFPYYS  163 (278)
T ss_dssp             SCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSSSSCCTTSHHHH
T ss_pred             CCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEecccccccCCCCccHHH
Confidence             79999999986421              1245789999999998887653    5 79999999643 22334456799


Q ss_pred             HHHHHHHHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHH
Q 023205          181 EGKRAAETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTV  254 (286)
Q Consensus       181 ~sK~~~E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D  254 (286)
                      .+|...|.+.+.      ..|+++++++||.+.++...... .+................   ..|.     ..+++++|
T Consensus       164 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~---~~p~-----~~~~~~~d  234 (278)
T 1spx_A          164 IAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMG-MPEETSKKFYSTMATMKE---CVPA-----GVMGQPQD  234 (278)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC---------------HHHHHHHHH---HCTT-----SSCBCHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCccccccc-cCchhhhhhhHHHHHHHh---cCCC-----cCCCCHHH
Confidence            999999987753      46899999999999887532210 000000000010111110   1121     24789999


Q ss_pred             HHHHHHHHhcCCC---CCCCeeEeccccccccc
Q 023205          255 VAKVAVRAATDPV---FPPGIVDVHGILRYSQK  284 (286)
Q Consensus       255 va~~~~~~l~~~~---~~~~~~~l~~~~~~s~~  284 (286)
                      +|++++.++..+.   ..|++|++.|+..++.+
T Consensus       235 vA~~v~~l~s~~~~~~~tG~~~~vdgG~~~~~~  267 (278)
T 1spx_A          235 IAEVIAFLADRKTSSYIIGHQLVVDGGSSLIMG  267 (278)
T ss_dssp             HHHHHHHHHCHHHHTTCCSCEEEESTTGGGC--
T ss_pred             HHHHHHHHcCccccCcccCcEEEECCCcccccC
Confidence            9999999997543   45899999998877654

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=99.92  E-value=1.3e-24  Score=181.75  Aligned_cols=217  Identities=15%  Similarity=0.113  Sum_probs=156.1

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc--cccCCceeEEeccCCCHhHHHHHhc-------CCCEE
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSWANNVIWHQGNLLSSDSWKEALD-------GVTAV  125 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~--~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d~v  125 (286)
                      ..+++|||||+|+||++++++|+++|++|++++|+.++...  .....++.++.+|++|+++++++++       ++|+|
T Consensus         7 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l   86 (259)
T 4e6p_A            7 EGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPAAYAVQMDVTRQDSIDAAIAATVEHAGGLDIL   86 (259)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHSSSCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCceEEEeeCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            35789999999999999999999999999999998654211  1224578999999999999888876       78999


Q ss_pred             EEccccCCC----------cchhhhhhhHHHHHHHHHHHHc----C-CCEEEEEecCCcCCCCccccchHHHHHHHHHHH
Q 023205          126 ISCVGGFGS----------NSYMYKINGTANINAIRAASEK----G-VKRFVYISAADFGVANYLLQGYYEGKRAAETEL  190 (286)
Q Consensus       126 i~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~~~----~-v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~  190 (286)
                      |||||....          ....+++|+.++.++++++...    + ..+||++||............|+.+|...|.+.
T Consensus        87 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~  166 (259)
T 4e6p_A           87 VNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRGEALVAIYCATKAAVISLT  166 (259)
T ss_dssp             EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHH
T ss_pred             EECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccCCCCChHHHHHHHHHHHHH
Confidence            999997532          1345679999999998887543    2 358999999543333445678999999999877


Q ss_pred             HH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhccc--CCCCC--CCCCccCCCccHHHHHHHHH
Q 023205          191 LT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKP--LSQLP--LVGPLFTPPVNVTVVAKVAV  260 (286)
Q Consensus       191 ~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~--~~g~~~~~~i~v~Dva~~~~  260 (286)
                      +.      ..|+++++++||.++++.....           ...+......  .....  ..+.....+.+++|+|++++
T Consensus       167 ~~la~e~~~~gi~vn~v~PG~v~t~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~  235 (259)
T 4e6p_A          167 QSAGLDLIKHRINVNAIAPGVVDGEHWDGV-----------DALFARYENRPRGEKKRLVGEAVPFGRMGTAEDLTGMAI  235 (259)
T ss_dssp             HHHHHHHGGGTEEEEEEEECCBCSTTHHHH-----------HHHHHHHHTCCTTHHHHHHHHHSTTSSCBCTHHHHHHHH
T ss_pred             HHHHHHhhhcCCEEEEEEECCCccchhhhh-----------hhhhhhhccCChHHHHHHHhccCCCCCCcCHHHHHHHHH
Confidence            53      4589999999999998753211           0000000000  00000  00112346889999999999


Q ss_pred             HHhcCC--CCCCCeeEeccccccc
Q 023205          261 RAATDP--VFPPGIVDVHGILRYS  282 (286)
Q Consensus       261 ~~l~~~--~~~~~~~~l~~~~~~s  282 (286)
                      .++...  ...|++|++.|+..+|
T Consensus       236 ~L~s~~~~~itG~~i~vdgG~~~s  259 (259)
T 4e6p_A          236 FLASAESDYIVSQTYNVDGGNWMS  259 (259)
T ss_dssp             HTTSGGGTTCCSCEEEESTTSSCC
T ss_pred             HHhCCccCCCCCCEEEECcChhcC
Confidence            988643  3458999999987654

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=99.92  E-value=7e-26  Score=183.03  Aligned_cols=185  Identities=16%  Similarity=0.094  Sum_probs=142.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc--cccCCceeEEeccCCCHhHHHHHhc---CCCEEEEcccc
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSWANNVIWHQGNLLSSDSWKEALD---GVTAVISCVGG  131 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~--~~~~~~~~~i~~Dl~d~~~~~~~~~---~~d~vi~~a~~  131 (286)
                      |+|+||||+|+||++++++|+++  +|++++|++++...  .... . +++.+|++|++++.++++   ++|+||||||.
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~~-~-~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag~   76 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREVG-A-RALPADLADELEAKALLEEAGPLDLLVHAVGK   76 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHHT-C-EECCCCTTSHHHHHHHHHHHCSEEEEEECCCC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhcc-C-cEEEeeCCCHHHHHHHHHhcCCCCEEEECCCc
Confidence            57999999999999999999998  99999997643211  1111 2 889999999999999988   89999999986


Q ss_pred             CCC----------cchhhhhhhHHHHHHHHHHHHcCCCEEEEEecCCcCCCCccccchHHHHHHHHHHHHH------hCC
Q 023205          132 FGS----------NSYMYKINGTANINAIRAASEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLT------RYP  195 (286)
Q Consensus       132 ~~~----------~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~~------~~g  195 (286)
                      ...          ....+++|+.++.++++++++.+.++||++||........+...|+.+|...|.+++.      ..|
T Consensus        77 ~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~g  156 (207)
T 2yut_A           77 AGRASVREAGRDLVEEMLAAHLLTAAFVLKHARFQKGARAVFFGAYPRYVQVPGFAAYAAAKGALEAYLEAARKELLREG  156 (207)
T ss_dssp             CCCBCSCC---CHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCHHHHSSTTBHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred             CCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHhcCCcEEEEEcChhhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhC
Confidence            532          1346789999999999999766778999999963222334567899999999997754      369


Q ss_pred             CcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcCCCCCCCeeE
Q 023205          196 YGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDPVFPPGIVD  274 (286)
Q Consensus       196 ~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~  274 (286)
                      ++++++|||.++++...+                            .+.....+++++|+|++++.++.++.. +.+++
T Consensus       157 i~v~~v~pg~v~t~~~~~----------------------------~~~~~~~~~~~~dva~~~~~~~~~~~~-~~~~~  206 (207)
T 2yut_A          157 VHLVLVRLPAVATGLWAP----------------------------LGGPPKGALSPEEAARKVLEGLFREPV-PALLE  206 (207)
T ss_dssp             CEEEEECCCCBCSGGGGG----------------------------GTSCCTTCBCHHHHHHHHHHHHC--CC-CSCCC
T ss_pred             CEEEEEecCcccCCCccc----------------------------cCCCCCCCCCHHHHHHHHHHHHhCCCC-ccccc
Confidence            999999999998763110                            012235789999999999999987664 44444

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=99.92  E-value=7.5e-24  Score=177.56  Aligned_cols=220  Identities=12%  Similarity=0.060  Sum_probs=154.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc---cc--c-CCceeEEeccCCCHhHHHHHhc-------CC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR---DS--W-ANNVIWHQGNLLSSDSWKEALD-------GV  122 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~---~~--~-~~~~~~i~~Dl~d~~~~~~~~~-------~~  122 (286)
                      .++++||||+|+||++++++|+++|++|++++|+.++...   +.  . ..++.++.+|++|+++++++++       ++
T Consensus         7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   86 (263)
T 3ai3_A            7 GKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSSFGGA   86 (263)
T ss_dssp             TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHHHSSC
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            5789999999999999999999999999999998643211   00  0 3468899999999998888776       78


Q ss_pred             CEEEEccccCCC----------cchhhhhhhHHHHHHHHHHH----HcCCCEEEEEecCCcCCCCccccchHHHHHHHHH
Q 023205          123 TAVISCVGGFGS----------NSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEGKRAAET  188 (286)
Q Consensus       123 d~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~----~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~  188 (286)
                      |+||||||....          +...+++|+.++.++++++.    +.+..+||++||............|+.+|...|.
T Consensus        87 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~  166 (263)
T 3ai3_A           87 DILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICAVQPLWYEPIYNVTKAALMM  166 (263)
T ss_dssp             SEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHHHHH
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCCCcchHHHHHHHHHH
Confidence            999999986531          13466899999988888764    4566799999995332333456789999999998


Q ss_pred             HHHH------hCCCcEEEEeeCeeecCCCCCccc-cCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHH
Q 023205          189 ELLT------RYPYGGVILRPGFIYGTRTVGGMK-LPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVR  261 (286)
Q Consensus       189 ~~~~------~~g~~~~ilRp~~v~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~  261 (286)
                      +.+.      ..|++++++|||.++++....... ..........+........  ..|     ...+++++|+|++++.
T Consensus       167 ~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~p-----~~~~~~~~dvA~~~~~  239 (263)
T 3ai3_A          167 FSKTLATEVIKDNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADE--HAP-----IKRFASPEELANFFVF  239 (263)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHTTTTTCCHHHHHHHHHHH--HCT-----TCSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHhhhcCcEEEEEecCcccCcchhhhhHhhhcccCCcHHHHHHHHHhc--CCC-----CCCCcCHHHHHHHHHH
Confidence            7653      368999999999998864311000 0000000000111111000  012     1357899999999999


Q ss_pred             HhcCCC--CCCCeeEeccccccc
Q 023205          262 AATDPV--FPPGIVDVHGILRYS  282 (286)
Q Consensus       262 ~l~~~~--~~~~~~~l~~~~~~s  282 (286)
                      ++..+.  ..|++|++.|+..++
T Consensus       240 l~s~~~~~~~G~~~~vdgG~~~s  262 (263)
T 3ai3_A          240 LCSERATYSVGSAYFVDGGMLKT  262 (263)
T ss_dssp             HTSTTCTTCCSCEEEESTTCCCC
T ss_pred             HcCccccCCCCcEEEECCCcccc
Confidence            997643  458899999987654

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=99.92  E-value=2.8e-24  Score=178.45  Aligned_cols=207  Identities=17%  Similarity=0.134  Sum_probs=153.3

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc------cccCCceeEEeccCCCHhHHHHHhc-------C
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD-------G  121 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~------~~~~~~~~~i~~Dl~d~~~~~~~~~-------~  121 (286)
                      +.++++||||+|+||++++++|+++|++|++++|+..+...      .....++.++++|++|.++++++++       +
T Consensus         3 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   82 (246)
T 3osu_A            3 MTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFGS   82 (246)
T ss_dssp             CSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            35789999999999999999999999999999886533211      1123578899999999999888776       7


Q ss_pred             CCEEEEccccCCC----------cchhhhhhhHHHHHHHHHH----HHcCCCEEEEEecCCcCCCCccccchHHHHHHHH
Q 023205          122 VTAVISCVGGFGS----------NSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKRAAE  187 (286)
Q Consensus       122 ~d~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a----~~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E  187 (286)
                      +|++|||||....          +...+++|+.++.++++++    ++.+..+||++||........+...|+.+|...+
T Consensus        83 id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~  162 (246)
T 3osu_A           83 LDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVI  162 (246)
T ss_dssp             CCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHHHHH
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCCCChHHHHHHHHHH
Confidence            8999999997531          1346789999999999988    4556679999999532222345678999999999


Q ss_pred             HHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHH
Q 023205          188 TELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVR  261 (286)
Q Consensus       188 ~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~  261 (286)
                      .+.+.      ..|+++++++||.+.++.....           .+........  ..|     ...+.+.+|+|++++.
T Consensus       163 ~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~-----------~~~~~~~~~~--~~p-----~~r~~~~~dva~~v~~  224 (246)
T 3osu_A          163 GLTKSAARELASRGITVNAVAPGFIVSDMTDAL-----------SDELKEQMLT--QIP-----LARFGQDTDIANTVAF  224 (246)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECSBGGGCCSCS-----------CHHHHHHHHT--TCT-----TCSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHhcccCeEEEEEEECCCcCCccccc-----------CHHHHHHHHh--cCC-----CCCCcCHHHHHHHHHH
Confidence            87653      5689999999999987754211           0111111111  122     2346789999999999


Q ss_pred             HhcCCC--CCCCeeEecccc
Q 023205          262 AATDPV--FPPGIVDVHGIL  279 (286)
Q Consensus       262 ~l~~~~--~~~~~~~l~~~~  279 (286)
                      ++..+.  ..|++|++.|+.
T Consensus       225 l~s~~~~~itG~~i~vdgG~  244 (246)
T 3osu_A          225 LASDKAKYITGQTIHVNGGM  244 (246)
T ss_dssp             HTSGGGTTCCSCEEEESTTS
T ss_pred             HhCccccCCCCCEEEeCCCc
Confidence            987543  458999998874

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.92  E-value=8.8e-24  Score=176.48  Aligned_cols=213  Identities=15%  Similarity=0.084  Sum_probs=151.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc--cccCCceeEEeccCCCHhHHHHHhc-------CCCEEE
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSWANNVIWHQGNLLSSDSWKEALD-------GVTAVI  126 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~--~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d~vi  126 (286)
                      .++++||||+|+||++++++|+++|++|++++|+.++ ..  +... . .++++|++|+++++++++       ++|+||
T Consensus         6 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~-~-~~~~~D~~~~~~~~~~~~~~~~~~g~iD~lv   82 (256)
T 2d1y_A            6 GKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAIG-G-AFFQVDLEDERERVRFVEEAAYALGRVDVLV   82 (256)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHHT-C-EEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHhh-C-CEEEeeCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            5789999999999999999999999999999998765 21  1111 3 789999999998887765       689999


Q ss_pred             EccccCCC----------cchhhhhhhHHHHHHHHHHHH----cCCCEEEEEecCCcCCCCccccchHHHHHHHHHHHHH
Q 023205          127 SCVGGFGS----------NSYMYKINGTANINAIRAASE----KGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLT  192 (286)
Q Consensus       127 ~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~~----~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~~  192 (286)
                      ||||....          ....+++|+.++.++++++..    .+..+||++||...-........|+.+|...|.+.+.
T Consensus        83 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~  162 (256)
T 2d1y_A           83 NNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGGLVNLTRS  162 (256)
T ss_dssp             ECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCTTBHHHHHHHHHHHHHHHH
T ss_pred             ECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccccccCCCCCChhHHHHHHHHHHHHHH
Confidence            99986532          135678999999999887753    4567999999953222334567899999999987653


Q ss_pred             ------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcCC
Q 023205          193 ------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDP  266 (286)
Q Consensus       193 ------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~  266 (286)
                            ..|+++++++||.+.++........... .......+   .   ...|     ...+++++|+|++++.++..+
T Consensus       163 la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~-~~~~~~~~---~---~~~~-----~~~~~~~~dvA~~~~~l~s~~  230 (256)
T 2d1y_A          163 LALDLAPLRIRVNAVAPGAIATEAVLEAIALSPD-PERTRRDW---E---DLHA-----LRRLGKPEEVAEAVLFLASEK  230 (256)
T ss_dssp             HHHHHGGGTEEEEEEEECSBCCHHHHHHHC---------CHHH---H---TTST-----TSSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHhhcCeEEEEEeeCCccCchhhhccccccC-CHHHHHHH---H---hcCC-----CCCCcCHHHHHHHHHHHhCch
Confidence                  4689999999999975421100000000 00000000   0   0111     235789999999999999764


Q ss_pred             --CCCCCeeEecccccccc
Q 023205          267 --VFPPGIVDVHGILRYSQ  283 (286)
Q Consensus       267 --~~~~~~~~l~~~~~~s~  283 (286)
                        ...|+.|++.|+..+++
T Consensus       231 ~~~~~G~~~~v~gG~~~~~  249 (256)
T 2d1y_A          231 ASFITGAILPVDGGMTASF  249 (256)
T ss_dssp             GTTCCSCEEEESTTGGGBC
T ss_pred             hcCCCCCEEEECCCccccc
Confidence              34688999999877665

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.92  E-value=1e-23  Score=176.68  Aligned_cols=211  Identities=18%  Similarity=0.131  Sum_probs=156.8

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc------cccCCceeEEeccCCCHhHHHHHhc-------
Q 023205           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD-------  120 (286)
Q Consensus        54 ~~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~------~~~~~~~~~i~~Dl~d~~~~~~~~~-------  120 (286)
                      ...++++||||+|+||++++++|+++|++|++++|+.++...      .....++.++.+|++|+++++++++       
T Consensus         8 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   87 (262)
T 3pk0_A            8 LQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEFG   87 (262)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            446799999999999999999999999999999998654211      1112578999999999999888775       


Q ss_pred             CCCEEEEccccCCC----------cchhhhhhhHHHHHHHHHHHHc----CCCEEEEEecCCcC-CCCccccchHHHHHH
Q 023205          121 GVTAVISCVGGFGS----------NSYMYKINGTANINAIRAASEK----GVKRFVYISAADFG-VANYLLQGYYEGKRA  185 (286)
Q Consensus       121 ~~d~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~~~----~v~~~v~~Ss~~~~-~~~~~~~~y~~sK~~  185 (286)
                      ++|++|||||....          ....+++|+.++.++++++...    +..+||++||.... ........|+.+|..
T Consensus        88 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~Y~asK~a  167 (262)
T 3pk0_A           88 GIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPITGYPGWSHYGATKAA  167 (262)
T ss_dssp             CCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTTTBCCTTCHHHHHHHHH
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCCCCChhhHHHHHH
Confidence            78999999996531          1345789999999988887653    67799999995422 333456789999999


Q ss_pred             HHHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHH
Q 023205          186 AETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVA  259 (286)
Q Consensus       186 ~E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~  259 (286)
                      .+.+.+.      ..|+++++++||.+.++.....          ..+.......   .+|.     ..+.+++|+|+++
T Consensus       168 ~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~----------~~~~~~~~~~---~~p~-----~r~~~p~dva~~v  229 (262)
T 3pk0_A          168 QLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLEN----------GEEYIASMAR---SIPA-----GALGTPEDIGHLA  229 (262)
T ss_dssp             HHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHTT----------CHHHHHHHHT---TSTT-----SSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhCcEEEEEEeCcCcCcccccc----------CHHHHHHHHh---cCCC-----CCCcCHHHHHHHH
Confidence            9987753      4689999999999987642211          0111111111   1222     2467899999999


Q ss_pred             HHHhcCCC--CCCCeeEeccccccc
Q 023205          260 VRAATDPV--FPPGIVDVHGILRYS  282 (286)
Q Consensus       260 ~~~l~~~~--~~~~~~~l~~~~~~s  282 (286)
                      +.++..+.  ..|+++++.|+..+.
T Consensus       230 ~~L~s~~~~~itG~~i~vdGG~~~~  254 (262)
T 3pk0_A          230 AFLATKEAGYITGQAIAVDGGQVLP  254 (262)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTTTCC
T ss_pred             HHHhCccccCCcCCEEEECCCeecC
Confidence            99997543  568999999987664

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=99.92  E-value=8.9e-24  Score=177.16  Aligned_cols=210  Identities=14%  Similarity=0.170  Sum_probs=154.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc--cccCCceeEEeccCCCHhHHHHHhc-------CCCEEE
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSWANNVIWHQGNLLSSDSWKEALD-------GVTAVI  126 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~--~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d~vi  126 (286)
                      .++|+||||+|+||++++++|+++|++|++++|+.++...  .....++.++.+|++|+++++++++       ++|+||
T Consensus        12 ~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~li   91 (265)
T 2o23_A           12 GLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVDVAV   91 (265)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEEE
Confidence            5789999999999999999999999999999998765221  1123578999999999999988876       799999


Q ss_pred             EccccCCC----------------cchhhhhhhHHHHHHHHHHHHc----------CCCEEEEEecCCcCCCCccccchH
Q 023205          127 SCVGGFGS----------------NSYMYKINGTANINAIRAASEK----------GVKRFVYISAADFGVANYLLQGYY  180 (286)
Q Consensus       127 ~~a~~~~~----------------~~~~~~~~~~~~~~l~~~a~~~----------~v~~~v~~Ss~~~~~~~~~~~~y~  180 (286)
                      ||||....                ....+++|+.++.++++++...          +..+||++||........+...|+
T Consensus        92 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~  171 (265)
T 2o23_A           92 NCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYS  171 (265)
T ss_dssp             ECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCTTCHHHH
T ss_pred             ECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChhhcCCCCCCchhH
Confidence            99986521                1245689999999999988754          567899999953222334567899


Q ss_pred             HHHHHHHHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHH
Q 023205          181 EGKRAAETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTV  254 (286)
Q Consensus       181 ~sK~~~E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D  254 (286)
                      .+|...+.+.+.      ..|+++++++||.+.++.....   +    ......+..      .+|.    ...+++++|
T Consensus       172 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~---~----~~~~~~~~~------~~~~----~~~~~~~~d  234 (265)
T 2o23_A          172 ASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSL---P----EKVCNFLAS------QVPF----PSRLGDPAE  234 (265)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC-----------------CHHHH------TCSS----SCSCBCHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCcccccc---C----HHHHHHHHH------cCCC----cCCCCCHHH
Confidence            999999886653      4689999999999987643210   0    000000110      1121    124689999


Q ss_pred             HHHHHHHHhcCCCCCCCeeEeccccccc
Q 023205          255 VAKVAVRAATDPVFPPGIVDVHGILRYS  282 (286)
Q Consensus       255 va~~~~~~l~~~~~~~~~~~l~~~~~~s  282 (286)
                      +|++++.++..+...|+.+++.|+..+.
T Consensus       235 va~~~~~l~~~~~~~G~~i~vdgG~~~~  262 (265)
T 2o23_A          235 YAHLVQAIIENPFLNGEVIRLDGAIRMQ  262 (265)
T ss_dssp             HHHHHHHHHHCTTCCSCEEEESTTCCCC
T ss_pred             HHHHHHHHhhcCccCceEEEECCCEecC
Confidence            9999999998777779999999886543

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=99.92  E-value=3.5e-24  Score=179.66  Aligned_cols=211  Identities=14%  Similarity=0.172  Sum_probs=155.1

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc------cccCCceeEEeccCCCHhHHHHHhc-------C
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD-------G  121 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~------~~~~~~~~~i~~Dl~d~~~~~~~~~-------~  121 (286)
                      ++++++||||+|+||++++++|+++|++|+++.|+......      .....++.++.+|++|+++++++++       +
T Consensus         6 ~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   85 (264)
T 3i4f_A            6 FVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHFGK   85 (264)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             ccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            46789999999999999999999999999999887644211      1123578999999999999888876       7


Q ss_pred             CCEEEEccccC--C----------CcchhhhhhhHHHHHHHHHH----HHcCCCEEEEEecC-CcCCC-CccccchHHHH
Q 023205          122 VTAVISCVGGF--G----------SNSYMYKINGTANINAIRAA----SEKGVKRFVYISAA-DFGVA-NYLLQGYYEGK  183 (286)
Q Consensus       122 ~d~vi~~a~~~--~----------~~~~~~~~~~~~~~~l~~~a----~~~~v~~~v~~Ss~-~~~~~-~~~~~~y~~sK  183 (286)
                      +|+||||||..  .          .....+++|+.++.++++++    ++.+..+||++||. .+... ..+...|+.+|
T Consensus        86 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~Y~asK  165 (264)
T 3i4f_A           86 IDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQGADSAPGWIYRSAFAAAK  165 (264)
T ss_dssp             CCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTTGGGCCCCTTCHHHHHHH
T ss_pred             CCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCeEEEEeechhcccCCCCCCchhHHHH
Confidence            89999999932  1          11355789999999999887    55667799999986 33222 23457899999


Q ss_pred             HHHHHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHH
Q 023205          184 RAAETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAK  257 (286)
Q Consensus       184 ~~~E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~  257 (286)
                      ...+.+.+.      ..|+++++++||.+.++.....           .+.......  ...|     ...+.+++|+|+
T Consensus       166 aa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-----------~~~~~~~~~--~~~p-----~~r~~~~~dva~  227 (264)
T 3i4f_A          166 VGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEAT-----------IQEARQLKE--HNTP-----IGRSGTGEDIAR  227 (264)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGSCC-----------HHHHHHC---------------CCCCHHHHHH
T ss_pred             HHHHHHHHHHHHHhhhcCcEEEEEccCCccCccchhc-----------cHHHHHHHh--hcCC-----CCCCcCHHHHHH
Confidence            999987653      4689999999999988754221           111111111  1111     234689999999


Q ss_pred             HHHHHhcCCC--CCCCeeEecccccccc
Q 023205          258 VAVRAATDPV--FPPGIVDVHGILRYSQ  283 (286)
Q Consensus       258 ~~~~~l~~~~--~~~~~~~l~~~~~~s~  283 (286)
                      +++.++..+.  ..|+++++.|+....+
T Consensus       228 ~v~~l~s~~~~~itG~~i~vdGG~~~~~  255 (264)
T 3i4f_A          228 TISFLCEDDSDMITGTIIEVTGAVDVIH  255 (264)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESCSCCCCC
T ss_pred             HHHHHcCcccCCCCCcEEEEcCceeecc
Confidence            9999997543  4689999999766554

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=99.92  E-value=1.5e-23  Score=174.91  Aligned_cols=219  Identities=13%  Similarity=0.087  Sum_probs=151.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCccccc---ccCCceeEEeccCCCHhHHHHHhc-------CCCEE
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRD---SWANNVIWHQGNLLSSDSWKEALD-------GVTAV  125 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~---~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d~v  125 (286)
                      .++++||||+|+||++++++|+++|++|++++|+.+....+   ....++.++.+|++|+++++++++       ++|+|
T Consensus         4 ~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l   83 (255)
T 2q2v_A            4 GKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPAPALAEIARHGVKAVHHPADLSDVAQIEALFALAEREFGGVDIL   83 (255)
T ss_dssp             TCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHHSSCSEE
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            57899999999999999999999999999999987521111   113468889999999999988887       79999


Q ss_pred             EEccccCCC----------cchhhhhhhHHHHHHHHHH----HHcCCCEEEEEecCCcCCCCccccchHHHHHHHHHHHH
Q 023205          126 ISCVGGFGS----------NSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELL  191 (286)
Q Consensus       126 i~~a~~~~~----------~~~~~~~~~~~~~~l~~~a----~~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~  191 (286)
                      |||||....          ....+++|+.++.++.+++    ++.+..+||++||...-........|+.+|...+.+.+
T Consensus        84 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~  163 (255)
T 2q2v_A           84 VNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNWGRIINIASVHGLVGSTGKAAYVAAKHGVVGLTK  163 (255)
T ss_dssp             EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHH
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcCchhccCCCCchhHHHHHHHHHHHHH
Confidence            999986431          1346688999877666654    55667899999995322233446789999999998765


Q ss_pred             H------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcC
Q 023205          192 T------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATD  265 (286)
Q Consensus       192 ~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~  265 (286)
                      .      ..|+++++++||.+.++.................+......  ....|     ...+++++|+|++++.++..
T Consensus       164 ~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~p-----~~~~~~~~dvA~~~~~l~s~  236 (255)
T 2q2v_A          164 VVGLETATSNVTCNAICPGWVLTPLVQKQIDDRAANGGDPLQAQHDLL--AEKQP-----SLAFVTPEHLGELVLFLCSE  236 (255)
T ss_dssp             HHHHHTTTSSEEEEEEEESSBCCHHHHHHHHHHHHHTCCHHHHHHHHH--TTTCT-----TCCCBCHHHHHHHHHHHTSG
T ss_pred             HHHHHhcccCcEEEEEeeCCCcCcchhhhcccccccccchHHHHHHHH--hccCC-----CCCCcCHHHHHHHHHHHhCC
Confidence            3      36899999999999876421000000000000000000000  11122     23589999999999999876


Q ss_pred             CC--CCCCeeEecccccc
Q 023205          266 PV--FPPGIVDVHGILRY  281 (286)
Q Consensus       266 ~~--~~~~~~~l~~~~~~  281 (286)
                      +.  ..|+.|++.|+..+
T Consensus       237 ~~~~~tG~~~~vdgG~~~  254 (255)
T 2q2v_A          237 AGSQVRGAAWNVDGGWLA  254 (255)
T ss_dssp             GGTTCCSCEEEESTTGGG
T ss_pred             ccCCCCCCEEEECCCccC
Confidence            43  45889999987543

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=99.92  E-value=3.3e-24  Score=177.97  Aligned_cols=205  Identities=21%  Similarity=0.154  Sum_probs=149.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc--cc----cCCceeEEeccCCCHhHHHHHhc-------CC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DS----WANNVIWHQGNLLSSDSWKEALD-------GV  122 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~--~~----~~~~~~~i~~Dl~d~~~~~~~~~-------~~  122 (286)
                      .++|+||||+|+||++++++|+++|++|++++|+.++...  ..    ...++.++.+|++|+++++++++       ++
T Consensus         7 ~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   86 (248)
T 2pnf_A            7 GKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLVDGI   86 (248)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHSSCC
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence            5789999999999999999999999999999998643211  00    23578899999999999988876       79


Q ss_pred             CEEEEccccCCC----------cchhhhhhhHHHHHHHHHH----HHcCCCEEEEEecCCcCCCCccccchHHHHHHHHH
Q 023205          123 TAVISCVGGFGS----------NSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKRAAET  188 (286)
Q Consensus       123 d~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a----~~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~  188 (286)
                      |+||||||....          ....+++|+.++.++++++    ++.+.++||++||........+...|+.+|...|.
T Consensus        87 d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  166 (248)
T 2pnf_A           87 DILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGNVGQVNYSTTKAGLIG  166 (248)
T ss_dssp             SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHHHHHH
T ss_pred             CEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhcCCCCCCchHHHHHHHHHH
Confidence            999999986532          1246789999997666654    45677899999994211122345689999999998


Q ss_pred             HHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHH
Q 023205          189 ELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRA  262 (286)
Q Consensus       189 ~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~  262 (286)
                      +.+.      ..+++++++|||.++++.....        .   ..+......  ..|     ...+++++|+|++++.+
T Consensus       167 ~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~--------~---~~~~~~~~~--~~~-----~~~~~~~~dva~~~~~l  228 (248)
T 2pnf_A          167 FTKSLAKELAPRNVLVNAVAPGFIETDMTAVL--------S---EEIKQKYKE--QIP-----LGRFGSPEEVANVVLFL  228 (248)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECSBCCGGGGGS--------C---HHHHHHHHH--TCT-----TSSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHhcccCeEEEEEEeceecCchhhhc--------c---HHHHHHHHh--cCC-----CCCccCHHHHHHHHHHH
Confidence            7653      3589999999999987643210        0   111111110  112     13478999999999999


Q ss_pred             hcCC--CCCCCeeEeccc
Q 023205          263 ATDP--VFPPGIVDVHGI  278 (286)
Q Consensus       263 l~~~--~~~~~~~~l~~~  278 (286)
                      +..+  ...|++|++.|+
T Consensus       229 ~~~~~~~~~G~~~~v~gg  246 (248)
T 2pnf_A          229 CSELASYITGEVIHVNGG  246 (248)
T ss_dssp             HSGGGTTCCSCEEEESTT
T ss_pred             hCchhhcCCCcEEEeCCC
Confidence            9753  345889999876

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=99.92  E-value=2.1e-23  Score=176.52  Aligned_cols=222  Identities=16%  Similarity=0.122  Sum_probs=157.3

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcc-----------cc------cccCCceeEEeccCCCHhHHH
Q 023205           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSS-----------LR------DSWANNVIWHQGNLLSSDSWK  116 (286)
Q Consensus        54 ~~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~-----------~~------~~~~~~~~~i~~Dl~d~~~~~  116 (286)
                      ...++++||||+|+||++++++|+++|++|++++|+....           ..      .....++.++.+|++|+++++
T Consensus         8 l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~   87 (281)
T 3s55_A            8 FEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAALE   87 (281)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHH
Confidence            3467999999999999999999999999999999974321           00      112357899999999999988


Q ss_pred             HHhc-------CCCEEEEccccCCC----------cchhhhhhhHHHHHHHHHHH----HcCCCEEEEEecCCcCCCCcc
Q 023205          117 EALD-------GVTAVISCVGGFGS----------NSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYL  175 (286)
Q Consensus       117 ~~~~-------~~d~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~----~~~v~~~v~~Ss~~~~~~~~~  175 (286)
                      ++++       ++|++|||||....          ....+++|+.++.++++++.    +.+..+||++||.........
T Consensus        88 ~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  167 (281)
T 3s55_A           88 SFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHSANFA  167 (281)
T ss_dssp             HHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCTT
T ss_pred             HHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhcCCCCC
Confidence            8775       68999999996531          13567899999999988863    455679999999543333445


Q ss_pred             ccchHHHHHHHHHHHHH------hCCCcEEEEeeCeeecCCCCCcc----ccCccccCchHHHHHHhcccCCCCCCCCCc
Q 023205          176 LQGYYEGKRAAETELLT------RYPYGGVILRPGFIYGTRTVGGM----KLPLGVIGSPMEMVLQHAKPLSQLPLVGPL  245 (286)
Q Consensus       176 ~~~y~~sK~~~E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  245 (286)
                      ...|+.+|...+.+.+.      ..|+++++++||.++++......    ..+. ................      +..
T Consensus       168 ~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~------~~~  240 (281)
T 3s55_A          168 QASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPD-LEKPTLKDVESVFASL------HLQ  240 (281)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTTSSHHHHHC--------CCHHHHHHHHHHH------CSS
T ss_pred             CchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccccchhhhcccccc-ccccchhHHHHHHHhh------hcc
Confidence            67899999999987653      46899999999999988653211    0000 0000000000000000      111


Q ss_pred             cCCCccHHHHHHHHHHHhcCCC--CCCCeeEeccccccc
Q 023205          246 FTPPVNVTVVAKVAVRAATDPV--FPPGIVDVHGILRYS  282 (286)
Q Consensus       246 ~~~~i~v~Dva~~~~~~l~~~~--~~~~~~~l~~~~~~s  282 (286)
                      ...+.+++|+|++++.++..+.  ..|+++++.|+...+
T Consensus       241 ~~~~~~p~dvA~~v~~L~s~~~~~itG~~i~vdgG~~~~  279 (281)
T 3s55_A          241 YAPFLKPEEVTRAVLFLVDEASSHITGTVLPIDAGATAR  279 (281)
T ss_dssp             SCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGG
T ss_pred             CcCCCCHHHHHHHHHHHcCCcccCCCCCEEEECCCcccC
Confidence            2467899999999999997643  458999999987654

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=99.92  E-value=9.6e-24  Score=176.62  Aligned_cols=203  Identities=19%  Similarity=0.164  Sum_probs=150.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc--cccCCceeEEeccCCCHhHHHHHhc-------CCCEEE
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSWANNVIWHQGNLLSSDSWKEALD-------GVTAVI  126 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~--~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d~vi  126 (286)
                      .++|+||||+|+||++++++|+++|++|++++|+.++...  .....++.++.+|++|+++++++++       ++|+||
T Consensus         7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~lv   86 (260)
T 1nff_A            7 GKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHVLV   86 (260)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcCceEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            5789999999999999999999999999999998644211  1112358899999999999988886       799999


Q ss_pred             EccccCCC----------cchhhhhhhHHHHHHHHHH----HHcCCCEEEEEecCCcCCCCccccchHHHHHHHHHHHHH
Q 023205          127 SCVGGFGS----------NSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLT  192 (286)
Q Consensus       127 ~~a~~~~~----------~~~~~~~~~~~~~~l~~~a----~~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~~  192 (286)
                      ||||....          ....+++|+.++.++.+++    ++.+..+||++||........+...|+.+|...|.+.+.
T Consensus        87 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~  166 (260)
T 1nff_A           87 NNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKS  166 (260)
T ss_dssp             ECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHH
T ss_pred             ECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEeehhhcCCCCCchhHHHHHHHHHHHHHH
Confidence            99996532          1346789999997665554    455677999999953222334556899999999987653


Q ss_pred             ------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcCC
Q 023205          193 ------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDP  266 (286)
Q Consensus       193 ------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~  266 (286)
                            ..|++++++|||.++++...  . .     ..          .....|     ...+.+++|+|++++.++..+
T Consensus       167 la~e~~~~gi~v~~v~Pg~v~t~~~~--~-~-----~~----------~~~~~~-----~~~~~~~~dvA~~v~~l~s~~  223 (260)
T 1nff_A          167 TALELGPSGIRVNSIHPGLVKTPMTD--W-V-----PE----------DIFQTA-----LGRAAEPVEVSNLVVYLASDE  223 (260)
T ss_dssp             HHHHHGGGTEEEEEEEECCBCSGGGT--T-S-----CT----------TCSCCS-----SSSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHhCccCcEEEEEEeCCCCCCccc--c-c-----hh----------hHHhCc-----cCCCCCHHHHHHHHHHHhCcc
Confidence                  36899999999999887432  0 0     00          000111     134689999999999999754


Q ss_pred             C--CCCCeeEecccccc
Q 023205          267 V--FPPGIVDVHGILRY  281 (286)
Q Consensus       267 ~--~~~~~~~l~~~~~~  281 (286)
                      .  ..|+.|++.|+...
T Consensus       224 ~~~~~G~~~~v~gG~~~  240 (260)
T 1nff_A          224 SSYSTGAEFVVDGGTVA  240 (260)
T ss_dssp             GTTCCSCEEEESTTGGG
T ss_pred             ccCCcCCEEEECCCeec
Confidence            3  35889999987654

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=99.92  E-value=5.2e-24  Score=178.79  Aligned_cols=210  Identities=14%  Similarity=0.076  Sum_probs=142.5

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc-----cccCCceeEEeccCCCHhHHHHHh--------cC
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEAL--------DG  121 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~-----~~~~~~~~~i~~Dl~d~~~~~~~~--------~~  121 (286)
                      ..++|+||||+|+||++++++|+++|++|++++|+.++...     .....++.++.+|++|.+++++++        .+
T Consensus        13 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   92 (266)
T 1xq1_A           13 KAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGK   92 (266)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTTC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            35789999999999999999999999999999998643211     011346889999999999888777        46


Q ss_pred             CCEEEEccccCCC----------cchhhhhhhHHHHHHHHHH----HHcCCCEEEEEecCCcCCCCccccchHHHHHHHH
Q 023205          122 VTAVISCVGGFGS----------NSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKRAAE  187 (286)
Q Consensus       122 ~d~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a----~~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E  187 (286)
                      +|+||||||....          ....+++|+.++.++++++    ++.+.++||++||........+...|+.+|...|
T Consensus        93 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~  172 (266)
T 1xq1_A           93 LDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGALN  172 (266)
T ss_dssp             CSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC----------CCHHHHHHHHHH
T ss_pred             CcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhccCCCCCchHHHHHHHHH
Confidence            8999999986421          1245789999999998888    4567789999999532223344578999999999


Q ss_pred             HHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHH
Q 023205          188 TELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVR  261 (286)
Q Consensus       188 ~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~  261 (286)
                      .+.+.      ..|++++++|||.++++......          ...+.....  ...|     ...+++++|+|++++.
T Consensus       173 ~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~----------~~~~~~~~~--~~~~-----~~~~~~~~dva~~~~~  235 (266)
T 1xq1_A          173 QLARNLACEWASDGIRANAVAPAVIATPLAEAVY----------DDEFKKVVI--SRKP-----LGRFGEPEEVSSLVAF  235 (266)
T ss_dssp             HHHHHHHHHHGGGTCEEEEEECCSCC------------------------------------------CCGGGGHHHHHH
T ss_pred             HHHHHHHHHHhHhCcEEEEEeeCCCccchhhhhc----------CHHHHHHHH--hcCC-----CCCCcCHHHHHHHHHH
Confidence            87753      35899999999999987543210          000000000  0111     1246899999999999


Q ss_pred             HhcCC--CCCCCeeEecccccc
Q 023205          262 AATDP--VFPPGIVDVHGILRY  281 (286)
Q Consensus       262 ~l~~~--~~~~~~~~l~~~~~~  281 (286)
                      ++..+  ...|+.+++.|+..+
T Consensus       236 l~~~~~~~~~G~~~~v~gG~~~  257 (266)
T 1xq1_A          236 LCMPAASYITGQTICVDGGLTV  257 (266)
T ss_dssp             HTSGGGTTCCSCEEECCCCEEE
T ss_pred             HcCccccCccCcEEEEcCCccc
Confidence            98753  345889999998654

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=99.92  E-value=4.8e-23  Score=171.41  Aligned_cols=211  Identities=11%  Similarity=0.065  Sum_probs=145.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhc-------CCCEEEEc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD-------GVTAVISC  128 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d~vi~~  128 (286)
                      .++++||||+|+||++++++|+++|++|++++|+.+..     ..++.++.+|++|+++++++++       ++|+||||
T Consensus         7 ~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~-----~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~id~lv~~   81 (250)
T 2fwm_X            7 GKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQE-----QYPFATEVMDVADAAQVAQVCQRLLAETERLDALVNA   81 (250)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCSS-----CCSSEEEECCTTCHHHHHHHHHHHHHHCSCCCEEEEC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhhh-----cCCceEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            57899999999999999999999999999999986531     1238889999999999888875       68999999


Q ss_pred             cccCCC----------cchhhhhhhHHHHHHHHHH----HHcCCCEEEEEecCCcCCCCccccchHHHHHHHHHHHHH--
Q 023205          129 VGGFGS----------NSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLT--  192 (286)
Q Consensus       129 a~~~~~----------~~~~~~~~~~~~~~l~~~a----~~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~~--  192 (286)
                      ||....          ....+++|+.++.++++++    ++.+..+||++||............|+.+|...|.+.+.  
T Consensus        82 Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la  161 (250)
T 2fwm_X           82 AGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHTPRIGMSAYGASKAALKSLALSVG  161 (250)
T ss_dssp             CCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHH
T ss_pred             CCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCCCCCchHHHHHHHHHHHHHHHH
Confidence            986431          2356789999999998887    455678999999964333344567899999999987753  


Q ss_pred             ----hCCCcEEEEeeCeeecCCCCCccccCccccCchHH-HHHHhccc-CCCCCCCCCccCCCccHHHHHHHHHHHhcCC
Q 023205          193 ----RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPME-MVLQHAKP-LSQLPLVGPLFTPPVNVTVVAKVAVRAATDP  266 (286)
Q Consensus       193 ----~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~  266 (286)
                          ..|+++++++||.+.++...... .+.    ...+ .+...... ....|     ...+.+++|+|++++.++..+
T Consensus       162 ~e~~~~gi~v~~v~Pg~v~t~~~~~~~-~~~----~~~~~~~~~~~~~~~~~~p-----~~~~~~p~dvA~~v~~l~s~~  231 (250)
T 2fwm_X          162 LELAGSGVRCNVVSPGSTDTDMQRTLW-VSD----DAEEQRIRGFGEQFKLGIP-----LGKIARPQEIANTILFLASDL  231 (250)
T ss_dssp             HHHGGGTCEEEEEEECCC----------------------------------------------CHHHHHHHHHHHHSGG
T ss_pred             HHhCccCCEEEEEECCcccCccccccc-cCh----hHHHHHHhhhhhcccccCC-----CCCCcCHHHHHHHHHHHhCcc
Confidence                35899999999999887532110 000    0000 00000000 00111     124689999999999999764


Q ss_pred             --CCCCCeeEecccccc
Q 023205          267 --VFPPGIVDVHGILRY  281 (286)
Q Consensus       267 --~~~~~~~~l~~~~~~  281 (286)
                        ...|+.+.+.|+..+
T Consensus       232 ~~~~tG~~i~vdGG~~~  248 (250)
T 2fwm_X          232 ASHITLQDIVVDGGSTL  248 (250)
T ss_dssp             GTTCCSCEEEESTTTTT
T ss_pred             ccCCCCCEEEECCCccc
Confidence              346899999988654

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=99.92  E-value=1.4e-23  Score=175.43  Aligned_cols=208  Identities=17%  Similarity=0.107  Sum_probs=151.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc-----cccCCceeEEeccCCCHhHHHHHhc-------CCC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------GVT  123 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~-----~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d  123 (286)
                      .++|+||||+|+||++++++|+++|++|++++|+.++...     .....++.++.+|++|+++++++++       ++|
T Consensus        13 ~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   92 (260)
T 3awd_A           13 NRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQEGRVD   92 (260)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            5789999999999999999999999999999998643211     1113478999999999999888875       689


Q ss_pred             EEEEccccCC-C----------cchhhhhhhHHHHHHHHHHHH----cCCCEEEEEecCCc--CCCCccccchHHHHHHH
Q 023205          124 AVISCVGGFG-S----------NSYMYKINGTANINAIRAASE----KGVKRFVYISAADF--GVANYLLQGYYEGKRAA  186 (286)
Q Consensus       124 ~vi~~a~~~~-~----------~~~~~~~~~~~~~~l~~~a~~----~~v~~~v~~Ss~~~--~~~~~~~~~y~~sK~~~  186 (286)
                      +||||||... .          ....+++|+.++.++++++..    .+..+||++||...  +.+..+...|+.+|...
T Consensus        93 ~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~Y~~sK~a~  172 (260)
T 3awd_A           93 ILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVNRPQQQAAYNASKAGV  172 (260)
T ss_dssp             EEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSSCCHHHHHHHHHH
T ss_pred             EEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEecchhcccCCCCCccccHHHHHHH
Confidence            9999998643 1          134578999999999888754    45679999999532  22222337899999999


Q ss_pred             HHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHH
Q 023205          187 ETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAV  260 (286)
Q Consensus       187 E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~  260 (286)
                      |.+++.      ..|++++++|||.++++.......      .  .........   ..|     ...+++++|+|++++
T Consensus       173 ~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~------~--~~~~~~~~~---~~~-----~~~~~~~~dva~~~~  236 (260)
T 3awd_A          173 HQYIRSLAAEWAPHGIRANAVAPTYIETTLTRFGME------K--PELYDAWIA---GTP-----MGRVGQPDEVASVVQ  236 (260)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECCBCCTTTHHHHT------C--HHHHHHHHH---TCT-----TSSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHhhhcCeEEEEEEeeeeccchhhcccC------C--hHHHHHHHh---cCC-----cCCCCCHHHHHHHHH
Confidence            987753      368999999999999876421100      0  011111111   111     134789999999999


Q ss_pred             HHhcCC--CCCCCeeEecccc
Q 023205          261 RAATDP--VFPPGIVDVHGIL  279 (286)
Q Consensus       261 ~~l~~~--~~~~~~~~l~~~~  279 (286)
                      .++..+  ...|++|++.|+.
T Consensus       237 ~l~~~~~~~~~G~~~~v~gg~  257 (260)
T 3awd_A          237 FLASDAASLMTGAIVNVDAGF  257 (260)
T ss_dssp             HHHSGGGTTCCSCEEEESTTT
T ss_pred             HHhCchhccCCCcEEEECCce
Confidence            999753  3458899998875

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=99.92  E-value=1.2e-23  Score=178.88  Aligned_cols=213  Identities=21%  Similarity=0.157  Sum_probs=156.9

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc------cccCCceeEEeccCCCHhHHHHHhc------
Q 023205           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD------  120 (286)
Q Consensus        53 ~~~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~------~~~~~~~~~i~~Dl~d~~~~~~~~~------  120 (286)
                      ....++||||||+|+||++++++|+++|++|++++|+.++...      .....++.++.+|++|+++++++++      
T Consensus        38 ~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  117 (293)
T 3rih_A           38 DLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDAF  117 (293)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHHc
Confidence            3456799999999999999999999999999999998765321      1112478999999999988877765      


Q ss_pred             -CCCEEEEccccCCC----------cchhhhhhhHHHHHHHHHH----HHcCCCEEEEEecCCcC-CCCccccchHHHHH
Q 023205          121 -GVTAVISCVGGFGS----------NSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFG-VANYLLQGYYEGKR  184 (286)
Q Consensus       121 -~~d~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a----~~~~v~~~v~~Ss~~~~-~~~~~~~~y~~sK~  184 (286)
                       .+|++|||||....          +...+++|+.++.++++++    ++.+..+||++||.... ........|+.+|.
T Consensus       118 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iV~isS~~~~~~~~~~~~~Y~asKa  197 (293)
T 3rih_A          118 GALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPVTGYPGWSHYGASKA  197 (293)
T ss_dssp             SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSSCEEEEECCSBTTTBBCTTCHHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEeChhhccCCCCCCHHHHHHHH
Confidence             57999999996532          1356789999999998887    45667799999995322 33345678999999


Q ss_pred             HHHHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHH
Q 023205          185 AAETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKV  258 (286)
Q Consensus       185 ~~E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~  258 (286)
                      ..+.+.+.      ..|+++++++||.++++.....        .  .+.......   .+|.     ..+...+|+|++
T Consensus       198 a~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~--------~--~~~~~~~~~---~~p~-----~r~~~p~dvA~~  259 (293)
T 3rih_A          198 AQLGFMRTAAIELAPRGVTVNAILPGNILTEGLVDM--------G--EEYISGMAR---SIPM-----GMLGSPVDIGHL  259 (293)
T ss_dssp             HHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHT--------C--HHHHHHHHT---TSTT-----SSCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhhCeEEEEEecCCCcCcchhhc--------c--HHHHHHHHh---cCCC-----CCCCCHHHHHHH
Confidence            99987753      4689999999999987642110        0  011111111   1222     235689999999


Q ss_pred             HHHHhcCC--CCCCCeeEecccccccc
Q 023205          259 AVRAATDP--VFPPGIVDVHGILRYSQ  283 (286)
Q Consensus       259 ~~~~l~~~--~~~~~~~~l~~~~~~s~  283 (286)
                      ++.++...  ...|+++++.|+..+..
T Consensus       260 v~fL~s~~a~~itG~~i~vdGG~~~~~  286 (293)
T 3rih_A          260 AAFLATDEAGYITGQAIVVDGGQVLPE  286 (293)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTTTCBS
T ss_pred             HHHHhCccccCCCCCEEEECCCccCCC
Confidence            99999653  35689999999876643

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.92  E-value=2.5e-23  Score=176.03  Aligned_cols=217  Identities=14%  Similarity=0.061  Sum_probs=154.4

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCc------------ccc------cccCCceeEEeccCCCHhHH
Q 023205           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRS------------SLR------DSWANNVIWHQGNLLSSDSW  115 (286)
Q Consensus        54 ~~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~------------~~~------~~~~~~~~~i~~Dl~d~~~~  115 (286)
                      ...++++||||+|+||++++++|+++|++|++++|+...            ...      .....++.++.+|++|++++
T Consensus        13 l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v   92 (280)
T 3pgx_A           13 LQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAAL   92 (280)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHH
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHH
Confidence            346799999999999999999999999999999985311            000      11235788999999999998


Q ss_pred             HHHhc-------CCCEEEEccccCCC----------cchhhhhhhHHHHHHHHHHHH----cC-CCEEEEEecCCcCCCC
Q 023205          116 KEALD-------GVTAVISCVGGFGS----------NSYMYKINGTANINAIRAASE----KG-VKRFVYISAADFGVAN  173 (286)
Q Consensus       116 ~~~~~-------~~d~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~~----~~-v~~~v~~Ss~~~~~~~  173 (286)
                      +++++       ++|++|||||....          ....+++|+.++.++++++..    .+ ..+||++||.......
T Consensus        93 ~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  172 (280)
T 3pgx_A           93 RELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLKAT  172 (280)
T ss_dssp             HHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCC
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcchhhccCC
Confidence            88775       68999999997532          124678999999999888743    33 4589999995433334


Q ss_pred             ccccchHHHHHHHHHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccC
Q 023205          174 YLLQGYYEGKRAAETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFT  247 (286)
Q Consensus       174 ~~~~~y~~sK~~~E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  247 (286)
                      .....|+.+|...+.+.+.      ..|+++++++||.+.++.....         ...+.+.........++.......
T Consensus       173 ~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~  243 (280)
T 3pgx_A          173 PGNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIEPE---------AMMEIFARHPSFVHSFPPMPVQPN  243 (280)
T ss_dssp             TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCHH---------HHHHHHHHCGGGGGGSCCBTTBCS
T ss_pred             CCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcccchh---------hhhhhhhcCchhhhhhhhcccCCC
Confidence            4567899999999987653      4789999999999988754211         011111111111111111112223


Q ss_pred             CCccHHHHHHHHHHHhcCCC--CCCCeeEecccc
Q 023205          248 PPVNVTVVAKVAVRAATDPV--FPPGIVDVHGIL  279 (286)
Q Consensus       248 ~~i~v~Dva~~~~~~l~~~~--~~~~~~~l~~~~  279 (286)
                      .+++++|+|++++.++..+.  ..|+++++.|+.
T Consensus       244 r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~  277 (280)
T 3pgx_A          244 GFMTADEVADVVAWLAGDGSGTLTGTQIPVDKGA  277 (280)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCSSCEEEESTTG
T ss_pred             CCCCHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence            58999999999999997543  568999998874

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=99.92  E-value=2.3e-23  Score=174.65  Aligned_cols=218  Identities=20%  Similarity=0.129  Sum_probs=152.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc--cccCCceeEEeccCCCHhHHHHHhc-------CCCEEE
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSWANNVIWHQGNLLSSDSWKEALD-------GVTAVI  126 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~--~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d~vi  126 (286)
                      .++|+||||+|+||++++++|+++|++|++++|+.++...  .....++.++.+|++|+++++++++       ++|+||
T Consensus        12 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~iD~lv   91 (263)
T 3ak4_A           12 GRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFAVEVDVTKRASVDAAMQKAIDALGGFDLLC   91 (263)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCTTCCEEEECCTTCHHHHHHHHHHHHHHHTCCCEEE
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            5789999999999999999999999999999998644211  1122368899999999999988876       799999


Q ss_pred             EccccCCC----------cchhhhhhhHHHHHHHHHHHH----cC-CCEEEEEecCCcCCCCccccchHHHHHHHHHHHH
Q 023205          127 SCVGGFGS----------NSYMYKINGTANINAIRAASE----KG-VKRFVYISAADFGVANYLLQGYYEGKRAAETELL  191 (286)
Q Consensus       127 ~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~~----~~-v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~  191 (286)
                      ||||....          ....+++|+.++.++++++.+    .+ ..+||++||............|+.+|...|.+.+
T Consensus        92 ~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~  171 (263)
T 3ak4_A           92 ANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGAPLLAHYSASKFAVFGWTQ  171 (263)
T ss_dssp             ECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHH
T ss_pred             ECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccccCCCCchhHHHHHHHHHHHHH
Confidence            99986531          134668999999988887754    34 5799999995332333456789999999998765


Q ss_pred             H------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcC
Q 023205          192 T------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATD  265 (286)
Q Consensus       192 ~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~  265 (286)
                      .      ..|++++++|||.++++.............+...........  ...|     ...+++++|+|++++.++..
T Consensus       172 ~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~p-----~~~~~~~~dvA~~v~~l~s~  244 (263)
T 3ak4_A          172 ALAREMAPKNIRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYV--SLTP-----LGRIEEPEDVADVVVFLASD  244 (263)
T ss_dssp             HHHHHHGGGTCEEEEEEECSBTTHHHHHHHHHHHHHHTSCHHHHHHHHH--HTCT-----TCSCBCHHHHHHHHHHHHSG
T ss_pred             HHHHHHhHcCeEEEEEecccccChhhhhhccccccccccCcHHHHHHHH--hcCC-----CCCCcCHHHHHHHHHHHhCc
Confidence            3      358999999999998763210000000000000000000000  0112     23478999999999999976


Q ss_pred             C--CCCCCeeEeccccc
Q 023205          266 P--VFPPGIVDVHGILR  280 (286)
Q Consensus       266 ~--~~~~~~~~l~~~~~  280 (286)
                      +  ...|++|++.|+..
T Consensus       245 ~~~~~tG~~~~vdgG~~  261 (263)
T 3ak4_A          245 AARFMTGQGINVTGGVR  261 (263)
T ss_dssp             GGTTCCSCEEEESSSSS
T ss_pred             cccCCCCCEEEECcCEe
Confidence            4  34688999998754

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=99.92  E-value=3.3e-23  Score=172.81  Aligned_cols=208  Identities=15%  Similarity=0.116  Sum_probs=149.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc--cccCCceeEEeccCCCHhHHHHHhc-------CCCEEE
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSWANNVIWHQGNLLSSDSWKEALD-------GVTAVI  126 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~--~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d~vi  126 (286)
                      .++|+||||+|+||++++++|+++|++|++++|+.++...  .....++.++.+|++|+++++++++       ++|+||
T Consensus         5 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~lv   84 (254)
T 1hdc_A            5 GKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDGLV   84 (254)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            5789999999999999999999999999999998643211  1112468899999999999888776       799999


Q ss_pred             EccccCCC----------cchhhhhhhHHHHHHH----HHHHHcCCCEEEEEecCCcCCCCccccchHHHHHHHHHHHHH
Q 023205          127 SCVGGFGS----------NSYMYKINGTANINAI----RAASEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLT  192 (286)
Q Consensus       127 ~~a~~~~~----------~~~~~~~~~~~~~~l~----~~a~~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~~  192 (286)
                      ||||....          ....+++|+.++..+.    ..+++.+..+||++||............|+.+|...+.+.+.
T Consensus        85 ~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~  164 (254)
T 1hdc_A           85 NNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKL  164 (254)
T ss_dssp             ECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHH
T ss_pred             ECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCCCchhHHHHHHHHHHHHHH
Confidence            99986532          1346689999987554    445556678999999953222334567899999999987653


Q ss_pred             ------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCc-cHHHHHHHHHHHhcC
Q 023205          193 ------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPV-NVTVVAKVAVRAATD  265 (286)
Q Consensus       193 ------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i-~v~Dva~~~~~~l~~  265 (286)
                            ..|+++++++||.++++...               .+.  ......+. .......+. +++|+|++++.++..
T Consensus       165 la~e~~~~gi~v~~v~Pg~v~t~~~~---------------~~~--~~~~~~~~-~~~p~~~~~~~~~dvA~~v~~l~s~  226 (254)
T 1hdc_A          165 AAVELGTDRIRVNSVHPGMTYTPMTA---------------ETG--IRQGEGNY-PNTPMGRVGNEPGEIAGAVVKLLSD  226 (254)
T ss_dssp             HHHHHGGGTEEEEEEEECSBCCHHHH---------------HHT--CCCSTTSC-TTSTTSSCB-CHHHHHHHHHHHHSG
T ss_pred             HHHHhhhcCeEEEEEecccCcCcccc---------------ccc--hhHHHHHH-hcCCCCCCCCCHHHHHHHHHHHhCc
Confidence                  46899999999999875321               000  00000000 000112467 999999999999976


Q ss_pred             C--CCCCCeeEecccccc
Q 023205          266 P--VFPPGIVDVHGILRY  281 (286)
Q Consensus       266 ~--~~~~~~~~l~~~~~~  281 (286)
                      +  ...|+.+++.|+...
T Consensus       227 ~~~~~tG~~~~vdgG~~~  244 (254)
T 1hdc_A          227 TSSYVTGAELAVDGGWTT  244 (254)
T ss_dssp             GGTTCCSCEEEESTTTTT
T ss_pred             hhcCCCCCEEEECCCccc
Confidence            4  346889999887543

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=99.92  E-value=7.8e-24  Score=176.77  Aligned_cols=206  Identities=10%  Similarity=0.020  Sum_probs=146.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcC----CCEEEEcccc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDG----VTAVISCVGG  131 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~----~d~vi~~a~~  131 (286)
                      ||+|+||||+|+||++++++|+++|++|++++|+.++...       . +.+|++|.++++++++.    +|+||||||.
T Consensus         1 mk~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~-------~-~~~Dl~~~~~v~~~~~~~~~~id~lv~~Ag~   72 (257)
T 1fjh_A            1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA-------D-LSTAEGRKQAIADVLAKCSKGMDGLVLCAGL   72 (257)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC-------C-TTSHHHHHHHHHHHHTTCTTCCSEEEECCCC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc-------c-cccCCCCHHHHHHHHHHhCCCCCEEEECCCC
Confidence            4689999999999999999999999999999998755221       1 67899999999988864    4999999997


Q ss_pred             CC---CcchhhhhhhHHHHHHHHHHH----HcCCCEEEEEecCCcC----------------------------CCCccc
Q 023205          132 FG---SNSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFG----------------------------VANYLL  176 (286)
Q Consensus       132 ~~---~~~~~~~~~~~~~~~l~~~a~----~~~v~~~v~~Ss~~~~----------------------------~~~~~~  176 (286)
                      ..   .....+++|+.++.++++++.    +.+..+||++||....                            ....+.
T Consensus        73 ~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (257)
T 1fjh_A           73 GPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGN  152 (257)
T ss_dssp             CTTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHHHHHTCCTTHHH
T ss_pred             CCCcccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhhccccccchhhhhhcccchhhhhhhhhcccCCCCc
Confidence            54   345778999999999988875    4456799999995322                            122245


Q ss_pred             cchHHHHHHHHHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCc
Q 023205          177 QGYYEGKRAAETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPV  250 (286)
Q Consensus       177 ~~y~~sK~~~E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i  250 (286)
                      ..|+.+|...|.+.+.      ..|+++++++||.+.++......  +    ...   ........ ..|     ...++
T Consensus       153 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~--~----~~~---~~~~~~~~-~~~-----~~~~~  217 (257)
T 1fjh_A          153 LAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGL--Q----DPR---YGESIAKF-VPP-----MGRRA  217 (257)
T ss_dssp             HHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC------------------------------C-CCS-----TTSCC
T ss_pred             cHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccchhhc--c----chh---HHHHHHhc-ccc-----cCCCC
Confidence            6899999999987753      47899999999999876532110  0    000   00000000 111     12478


Q ss_pred             cHHHHHHHHHHHhcCC--CCCCCeeEeccccccccc
Q 023205          251 NVTVVAKVAVRAATDP--VFPPGIVDVHGILRYSQK  284 (286)
Q Consensus       251 ~v~Dva~~~~~~l~~~--~~~~~~~~l~~~~~~s~~  284 (286)
                      +++|+|++++.++..+  ...|+.+++.|+..+++.
T Consensus       218 ~~~dvA~~~~~l~~~~~~~~tG~~~~vdgG~~~~~~  253 (257)
T 1fjh_A          218 EPSEMASVIAFLMSPAASYVHGAQIVIDGGIDAVMR  253 (257)
T ss_dssp             CTHHHHHHHHHHTSGGGTTCCSCEEEESTTHHHHHC
T ss_pred             CHHHHHHHHHHHhCchhcCCcCCEEEECCCcccccc
Confidence            9999999999999765  346899999998766554

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=99.91  E-value=2e-23  Score=174.45  Aligned_cols=215  Identities=13%  Similarity=0.091  Sum_probs=156.5

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc-----cccCCceeEEeccCCCHhHHHHHhc-------CC
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------GV  122 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~-----~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~  122 (286)
                      ..+++|||||+|+||++++++|+++|++|++++|+.++...     .....++.++.+|++|+++++++++       ++
T Consensus         5 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   84 (257)
T 3imf_A            5 KEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKFGRI   84 (257)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            35789999999999999999999999999999998654211     1123578999999999998888775       68


Q ss_pred             CEEEEccccCCC----------cchhhhhhhHHHHHHHHHH-----HHcCCCEEEEEecCCcCCCCccccchHHHHHHHH
Q 023205          123 TAVISCVGGFGS----------NSYMYKINGTANINAIRAA-----SEKGVKRFVYISAADFGVANYLLQGYYEGKRAAE  187 (286)
Q Consensus       123 d~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a-----~~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E  187 (286)
                      |++|||||....          +...+++|+.++.++.+++     ++.+..+||++||............|+.+|...+
T Consensus        85 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~  164 (257)
T 3imf_A           85 DILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAKAGVL  164 (257)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGSCCTTCHHHHHHHHHHH
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhccCCCCcHHHHHHHHHHH
Confidence            999999995421          2356789999999998887     3344679999999643333445678999999998


Q ss_pred             HHHHH-------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHH
Q 023205          188 TELLT-------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAV  260 (286)
Q Consensus       188 ~~~~~-------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~  260 (286)
                      .+.+.       ..|+++++|+||.+.++......+...    ...+.+.      ..+|.     ..+.+++|+|++++
T Consensus       165 ~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~~~~~~~----~~~~~~~------~~~p~-----~r~~~pedvA~~v~  229 (257)
T 3imf_A          165 AMTKTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWISE----EMAKRTI------QSVPL-----GRLGTPEEIAGLAY  229 (257)
T ss_dssp             HHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC-----------CCSHHHH------TTSTT-----CSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHhccccCeEEEEEEECCCcCCcchhhcccCH----HHHHHHH------hcCCC-----CCCcCHHHHHHHHH
Confidence            86642       358999999999998775432111100    0111111      11222     34789999999999


Q ss_pred             HHhcCCC--CCCCeeEeccccccccc
Q 023205          261 RAATDPV--FPPGIVDVHGILRYSQK  284 (286)
Q Consensus       261 ~~l~~~~--~~~~~~~l~~~~~~s~~  284 (286)
                      .++..+.  ..|+.+++.|+..+.+.
T Consensus       230 ~L~s~~~~~itG~~i~vdGG~~~~~~  255 (257)
T 3imf_A          230 YLCSDEAAYINGTCMTMDGGQHLHQY  255 (257)
T ss_dssp             HHHSGGGTTCCSCEEEESTTTTSCCC
T ss_pred             HHcCchhcCccCCEEEECCCcccCCC
Confidence            9997543  46899999999877654

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=99.91  E-value=1.3e-23  Score=175.76  Aligned_cols=216  Identities=18%  Similarity=0.051  Sum_probs=154.9

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc---c--ccCCceeEEeccCCCHhHHHHHh--------cC
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR---D--SWANNVIWHQGNLLSSDSWKEAL--------DG  121 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~---~--~~~~~~~~i~~Dl~d~~~~~~~~--------~~  121 (286)
                      .+++|+||||+|+||++++++|+++|++|++++|+.++...   +  ....++.++.+|++|++++++++        .+
T Consensus         8 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   87 (260)
T 2ae2_A            8 EGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGK   87 (260)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTTC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            35789999999999999999999999999999998644211   0  11346889999999999888777        46


Q ss_pred             CCEEEEccccCCC----------cchhhhhhhHHHHHHHHHHH----HcCCCEEEEEecCCcCCCCccccchHHHHHHHH
Q 023205          122 VTAVISCVGGFGS----------NSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEGKRAAE  187 (286)
Q Consensus       122 ~d~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~----~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E  187 (286)
                      +|+||||||....          ....+++|+.++.++++++.    +.+..+||++||............|+.+|...|
T Consensus        88 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~  167 (260)
T 2ae2_A           88 LNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMD  167 (260)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCTTCHHHHHHHHHHH
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCcchHHHHHHHHH
Confidence            9999999996431          13467899999999988874    456679999999532223345678999999999


Q ss_pred             HHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHH
Q 023205          188 TELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVR  261 (286)
Q Consensus       188 ~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~  261 (286)
                      .+.+.      ..|+++++++||.+.++......  ..   ....+.+.....   ..|     ...+++++|+|++++.
T Consensus       168 ~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~--~~---~~~~~~~~~~~~---~~~-----~~~~~~~~dvA~~v~~  234 (260)
T 2ae2_A          168 QLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTI--QD---PEQKENLNKLID---RCA-----LRRMGEPKELAAMVAF  234 (260)
T ss_dssp             HHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHT--TS---HHHHHHHHHHHH---TST-----TCSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHhhcCcEEEEEecCCCCCcchhhhc--cC---hhhHHHHHHHHh---cCC-----CCCCCCHHHHHHHHHH
Confidence            87753      35899999999999765321000  00   000110101111   112     1347899999999999


Q ss_pred             HhcCC--CCCCCeeEecccccccc
Q 023205          262 AATDP--VFPPGIVDVHGILRYSQ  283 (286)
Q Consensus       262 ~l~~~--~~~~~~~~l~~~~~~s~  283 (286)
                      ++..+  ...|+++++.|+..+++
T Consensus       235 l~s~~~~~~tG~~~~vdgG~~~~~  258 (260)
T 2ae2_A          235 LCFPAASYVTGQIIYVDGGLMANC  258 (260)
T ss_dssp             HHSGGGTTCCSCEEEESTTGGGCS
T ss_pred             HcCccccCCCCCEEEECCCccccc
Confidence            98753  24689999999877654

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=99.91  E-value=2.7e-23  Score=175.86  Aligned_cols=220  Identities=16%  Similarity=0.170  Sum_probs=151.6

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc-------cccCCceeEEeccCCCHhHHHHHhc------
Q 023205           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-------DSWANNVIWHQGNLLSSDSWKEALD------  120 (286)
Q Consensus        54 ~~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~------  120 (286)
                      .+++++|||||+|+||++++++|+++|++|++++|+..+...       .....++.++.+|++|+++++++++      
T Consensus        23 l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  102 (281)
T 3v2h_A           23 MMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVADRF  102 (281)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHHHT
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHHHC
Confidence            346789999999999999999999999999999995432111       1114578999999999998888775      


Q ss_pred             -CCCEEEEccccCCC----------cchhhhhhhHHHHHHHHHH----HHcCCCEEEEEecCCcCCCCccccchHHHHHH
Q 023205          121 -GVTAVISCVGGFGS----------NSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKRA  185 (286)
Q Consensus       121 -~~d~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a----~~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~  185 (286)
                       ++|++|||||....          ....+++|+.++.++++++    ++.+..+||++||...-........|+.+|..
T Consensus       103 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa  182 (281)
T 3v2h_A          103 GGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLVASPFKSAYVAAKHG  182 (281)
T ss_dssp             SSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCcccccCCCCchHHHHHHHH
Confidence             68999999997531          1356789999999998887    44566789999995433333456789999999


Q ss_pred             HHHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHH
Q 023205          186 AETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVA  259 (286)
Q Consensus       186 ~E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~  259 (286)
                      .+.+.+.      ..|+++++++||.+.++............     .... ...........+.....+++++|+|+++
T Consensus       183 ~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~-----~~~~-~~~~~~~~~~~~~p~~r~~~~edvA~~v  256 (281)
T 3v2h_A          183 IMGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQIPDQART-----RGIT-EEQVINEVMLKGQPTKKFITVEQVASLA  256 (281)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCC----------------------------------CCTTCSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHhhhcCcEEEEEECCCCcCcchhhhcchhhhh-----cCCC-HHHHHHHHHHhcCCCCCccCHHHHHHHH
Confidence            9987653      46899999999999877542211000000     0000 0000000001112235689999999999


Q ss_pred             HHHhcCCC--CCCCeeEecccc
Q 023205          260 VRAATDPV--FPPGIVDVHGIL  279 (286)
Q Consensus       260 ~~~l~~~~--~~~~~~~l~~~~  279 (286)
                      +.++..+.  ..|+++++.|+.
T Consensus       257 ~~L~s~~a~~itG~~i~vdGG~  278 (281)
T 3v2h_A          257 LYLAGDDAAQITGTHVSMDGGW  278 (281)
T ss_dssp             HHHHSSGGGGCCSCEEEESTTG
T ss_pred             HHHcCCCcCCCCCcEEEECCCc
Confidence            99997654  468999999874

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=99.91  E-value=3.8e-24  Score=178.60  Aligned_cols=206  Identities=13%  Similarity=0.108  Sum_probs=150.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecC-CCcccc-----cccCCceeEEeccCCCHhHHHHHhc-------CC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRS-GRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------GV  122 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~-~~~~~~-----~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~  122 (286)
                      .++|+||||+|+||++++++|+++|++|++++|+ .++...     .....++.++.+|++|+++++++++       ++
T Consensus         7 ~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   86 (258)
T 3afn_B            7 GKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAKFGGI   86 (258)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSSC
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            5789999999999999999999999999999998 443211     0113478999999999999988887       79


Q ss_pred             CEEEEcccc-CCC----------cchhhhhhhHHHHHHHHHHHH----cC--C---CEEEEEecCCcCC-CCccccchHH
Q 023205          123 TAVISCVGG-FGS----------NSYMYKINGTANINAIRAASE----KG--V---KRFVYISAADFGV-ANYLLQGYYE  181 (286)
Q Consensus       123 d~vi~~a~~-~~~----------~~~~~~~~~~~~~~l~~~a~~----~~--v---~~~v~~Ss~~~~~-~~~~~~~y~~  181 (286)
                      |+||||||. ...          ....+++|+.++.++++++..    .+  .   .+||++||..... ...+...|+.
T Consensus        87 d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~Y~~  166 (258)
T 3afn_B           87 DVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGGGPGAGLYGA  166 (258)
T ss_dssp             SEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHCCCTTCHHHHH
T ss_pred             CEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccCCCCCchHHHH
Confidence            999999986 221          124568999999988886642    22  2   6899999953211 3345678999


Q ss_pred             HHHHHHHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHH
Q 023205          182 GKRAAETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVV  255 (286)
Q Consensus       182 sK~~~E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dv  255 (286)
                      +|...|.+.+.      ..|++++++|||.++++.....       ..   ........   ..|     ...+++++|+
T Consensus       167 sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~-------~~---~~~~~~~~---~~~-----~~~~~~~~dv  228 (258)
T 3afn_B          167 AKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHADK-------TQ---DVRDRISN---GIP-----MGRFGTAEEM  228 (258)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTTC-------CH---HHHHHHHT---TCT-----TCSCBCGGGT
T ss_pred             HHHHHHHHHHHHHHhhcccCeEEEEEeCCCccccccccc-------CH---HHHHHHhc---cCC-----CCcCCCHHHH
Confidence            99999987753      3589999999999988753211       01   11111111   111     2357899999


Q ss_pred             HHHHHHHhcCC---CCCCCeeEecccc
Q 023205          256 AKVAVRAATDP---VFPPGIVDVHGIL  279 (286)
Q Consensus       256 a~~~~~~l~~~---~~~~~~~~l~~~~  279 (286)
                      |++++.++..+   ...|++|++.|+.
T Consensus       229 a~~~~~l~~~~~~~~~~G~~~~v~gg~  255 (258)
T 3afn_B          229 APAFLFFASHLASGYITGQVLDINGGQ  255 (258)
T ss_dssp             HHHHHHHHCHHHHTTCCSEEEEESTTS
T ss_pred             HHHHHHHhCcchhccccCCEEeECCCc
Confidence            99999999754   3358899998865

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=99.91  E-value=6.6e-23  Score=172.57  Aligned_cols=207  Identities=17%  Similarity=0.105  Sum_probs=155.9

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc--cccCCceeEEeccCCCHhHHHHHhc-------CCCEE
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSWANNVIWHQGNLLSSDSWKEALD-------GVTAV  125 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~--~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d~v  125 (286)
                      ..++++||||+|+||++++++|+++|++|++++|+.++...  .....++.++.+|++|+++++++++       ++|++
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l   89 (271)
T 3tzq_B           10 ENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGRGAVHHVVDLTNEVSVRALIDFTIDTFGRLDIV   89 (271)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            35789999999999999999999999999999998765321  1224578999999999999888876       78999


Q ss_pred             EEccccCCC------------cchhhhhhhHHHHHHHHHH----HHcCCCEEEEEecCCcCCCCccccchHHHHHHHHHH
Q 023205          126 ISCVGGFGS------------NSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETE  189 (286)
Q Consensus       126 i~~a~~~~~------------~~~~~~~~~~~~~~l~~~a----~~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~  189 (286)
                      |||||....            +...+++|+.++.++++++    ++.+..+||++||............|+.+|...+.+
T Consensus        90 v~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l  169 (271)
T 3tzq_B           90 DNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGGAIVNISSATAHAAYDMSTAYACTKAAIETL  169 (271)
T ss_dssp             EECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSBCSSCHHHHHHHHHHHHH
T ss_pred             EECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCHHHcCCCCCChHHHHHHHHHHHH
Confidence            999997521            1246789999999999988    556667999999964333344567899999999987


Q ss_pred             HHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHh
Q 023205          190 LLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAA  263 (286)
Q Consensus       190 ~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l  263 (286)
                      .+.      ..|+++++++||.+.++......       .  .........   ..|.     ..+.+++|+|++++.++
T Consensus       170 ~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~-------~--~~~~~~~~~---~~~~-----~r~~~p~dvA~~v~~L~  232 (271)
T 3tzq_B          170 TRYVATQYGRHGVRCNAIAPGLVRTPRLEVGL-------P--QPIVDIFAT---HHLA-----GRIGEPHEIAELVCFLA  232 (271)
T ss_dssp             HHHHHHHHGGGTEEEEEEEECCBCCTTTC----------C--HHHHHHHHT---TSTT-----SSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHhhcCEEEEEEEeCCCcCccccccC-------C--HHHHHHHHh---cCCC-----CCCcCHHHHHHHHHHHh
Confidence            753      47899999999999987543111       0  011111111   1111     24678999999999999


Q ss_pred             cCC--CCCCCeeEeccc
Q 023205          264 TDP--VFPPGIVDVHGI  278 (286)
Q Consensus       264 ~~~--~~~~~~~~l~~~  278 (286)
                      ...  ...|+++++.|+
T Consensus       233 s~~~~~itG~~i~vdGG  249 (271)
T 3tzq_B          233 SDRAAFITGQVIAADSG  249 (271)
T ss_dssp             SGGGTTCCSCEEEESTT
T ss_pred             CcccCCcCCCEEEECCC
Confidence            754  346899999987

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=99.91  E-value=2.3e-23  Score=173.21  Aligned_cols=209  Identities=18%  Similarity=0.092  Sum_probs=150.6

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc--cccCCceeEEeccCCCHhHHHHHhc---CCCEEEEc
Q 023205           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSWANNVIWHQGNLLSSDSWKEALD---GVTAVISC  128 (286)
Q Consensus        54 ~~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~--~~~~~~~~~i~~Dl~d~~~~~~~~~---~~d~vi~~  128 (286)
                      ...++||||||+|+||+++++.|+++|++|++++|+.++...  +....++.++.+|++|.+++.++++   ++|+||||
T Consensus        12 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~li~~   91 (249)
T 3f9i_A           12 LTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIEVCNLANKEECSNLISKTSNLDILVCN   91 (249)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHTCSCCSEEEEC
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhccCccEEEcCCCCHHHHHHHHHhcCCCCEEEEC
Confidence            346899999999999999999999999999999998654211  2224578999999999999998886   68999999


Q ss_pred             cccCC----------CcchhhhhhhHHHHHHHHHHH----HcCCCEEEEEecCCcCCCCccccchHHHHHHHHHHHHH--
Q 023205          129 VGGFG----------SNSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLT--  192 (286)
Q Consensus       129 a~~~~----------~~~~~~~~~~~~~~~l~~~a~----~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~~--  192 (286)
                      ||...          .....+++|+.++.++++++.    +.+..+||++||...-........|+.+|...|.+.+.  
T Consensus        92 Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la  171 (249)
T 3f9i_A           92 AGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIAGNPGQANYCASKAGLIGMTKSLS  171 (249)
T ss_dssp             CC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC--CCSCSHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHhccCCCCCchhHHHHHHHHHHHHHHH
Confidence            99643          224667899999998888764    34556999999954333344567899999999986653  


Q ss_pred             ----hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcCCC-
Q 023205          193 ----RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDPV-  267 (286)
Q Consensus       193 ----~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~~-  267 (286)
                          ..|+++++++||.+.++......       ......+...      .     ....+.+++|+|++++.++..+. 
T Consensus       172 ~e~~~~gi~v~~v~PG~v~t~~~~~~~-------~~~~~~~~~~------~-----~~~~~~~~~dva~~~~~l~s~~~~  233 (249)
T 3f9i_A          172 YEVATRGITVNAVAPGFIKSDMTDKLN-------EKQREAIVQK------I-----PLGTYGIPEDVAYAVAFLASNNAS  233 (249)
T ss_dssp             HHHGGGTEEEEEEEECCBC------CC-------HHHHHHHHHH------C-----TTCSCBCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHcCcEEEEEecCccccCcccccC-------HHHHHHHHhc------C-----CCCCCcCHHHHHHHHHHHcCCccC
Confidence                46899999999999876432110       1111111111      1     12357889999999999997543 


Q ss_pred             -CCCCeeEeccccc
Q 023205          268 -FPPGIVDVHGILR  280 (286)
Q Consensus       268 -~~~~~~~l~~~~~  280 (286)
                       ..|+.+++.|+..
T Consensus       234 ~~tG~~~~vdgG~~  247 (249)
T 3f9i_A          234 YITGQTLHVNGGML  247 (249)
T ss_dssp             TCCSCEEEESTTSS
T ss_pred             CccCcEEEECCCEe
Confidence             4689999998754

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=99.91  E-value=2.1e-23  Score=175.68  Aligned_cols=215  Identities=14%  Similarity=0.059  Sum_probs=150.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc------cccCCceeEEeccCCCHhHHHHHhc-------CC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD-------GV  122 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~------~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~  122 (286)
                      .++|+||||+|+||++++++|+++|++|++++|+......      .....++.++.+|++|+++++++++       ++
T Consensus        21 ~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~  100 (274)
T 1ja9_A           21 GKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFGGL  100 (274)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCE
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            5789999999999999999999999999999994322111      1113578899999999999988876       78


Q ss_pred             CEEEEccccCCC----------cchhhhhhhHHHHHHHHHHHHc---CCCEEEEEecCCcC-CCCccccchHHHHHHHHH
Q 023205          123 TAVISCVGGFGS----------NSYMYKINGTANINAIRAASEK---GVKRFVYISAADFG-VANYLLQGYYEGKRAAET  188 (286)
Q Consensus       123 d~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~~~---~v~~~v~~Ss~~~~-~~~~~~~~y~~sK~~~E~  188 (286)
                      |+||||||....          ....+++|+.++.++++++.+.   + ++||++||.... ........|+.+|...|.
T Consensus       101 d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~iv~~sS~~~~~~~~~~~~~Y~~sK~a~~~  179 (274)
T 1ja9_A          101 DFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRG-GRIILTSSIAAVMTGIPNHALYAGSKAAVEG  179 (274)
T ss_dssp             EEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEE-EEEEEECCGGGTCCSCCSCHHHHHHHHHHHH
T ss_pred             CEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC-CEEEEEcChHhccCCCCCCchHHHHHHHHHH
Confidence            999999986532          1356789999999999988764   4 699999995322 233456789999999998


Q ss_pred             HHHH------hCCCcEEEEeeCeeecCCCCCccc--cCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHH
Q 023205          189 ELLT------RYPYGGVILRPGFIYGTRTVGGMK--LPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAV  260 (286)
Q Consensus       189 ~~~~------~~g~~~~ilRp~~v~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~  260 (286)
                      +++.      ..|++++++|||.++++.......  .+.................       +.....+++++|+|++++
T Consensus       180 ~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~dva~~i~  252 (274)
T 1ja9_A          180 FCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLAN-------MNPLKRIGYPADIGRAVS  252 (274)
T ss_dssp             HHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHH-------TSTTSSCBCHHHHHHHHH
T ss_pred             HHHHHHHHhhhcCeEEEEEeeCcccccchhcccccccccccccCchHHHHHHHHh-------cCCCCCccCHHHHHHHHH
Confidence            7753      358999999999998653221000  0000000000111111000       111245789999999999


Q ss_pred             HHhcCCC--CCCCeeEeccc
Q 023205          261 RAATDPV--FPPGIVDVHGI  278 (286)
Q Consensus       261 ~~l~~~~--~~~~~~~l~~~  278 (286)
                      .++..+.  ..|++|++.|+
T Consensus       253 ~l~~~~~~~~~G~~~~v~gG  272 (274)
T 1ja9_A          253 ALCQEESEWINGQVIKLTGG  272 (274)
T ss_dssp             HHHSGGGTTCCSCEEEESTT
T ss_pred             HHhCcccccccCcEEEecCC
Confidence            9997643  35889999886

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=99.91  E-value=1e-23  Score=176.22  Aligned_cols=210  Identities=17%  Similarity=0.214  Sum_probs=153.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhc------CCCEEEEcc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD------GVTAVISCV  129 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~------~~d~vi~~a  129 (286)
                      .+++|||||+|+||++++++|+++|++|++++|+.++.. .....++.++.+|++|+++++++++      .+|++||||
T Consensus         9 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~g~id~lv~nA   87 (257)
T 3tl3_A            9 DAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDVV-ADLGDRARFAAADVTDEAAVASALDLAETMGTLRIVVNCA   87 (257)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHHHH-HHTCTTEEEEECCTTCHHHHHHHHHHHHHHSCEEEEEECG
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHHHH-HhcCCceEEEECCCCCHHHHHHHHHHHHHhCCCCEEEECC
Confidence            578999999999999999999999999999999654422 2234689999999999999888776      789999999


Q ss_pred             ccCC--------------CcchhhhhhhHHHHHHHHHHHHc------------CCCEEEEEecCCcCCCCccccchHHHH
Q 023205          130 GGFG--------------SNSYMYKINGTANINAIRAASEK------------GVKRFVYISAADFGVANYLLQGYYEGK  183 (286)
Q Consensus       130 ~~~~--------------~~~~~~~~~~~~~~~l~~~a~~~------------~v~~~v~~Ss~~~~~~~~~~~~y~~sK  183 (286)
                      |...              .....+++|+.++.++++++...            +..+||++||...-........|+.+|
T Consensus        88 g~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  167 (257)
T 3tl3_A           88 GTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQIGQAAYSASK  167 (257)
T ss_dssp             GGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--CCHHHHHHHHHHH
T ss_pred             CCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhcCCCCCCccHHHHH
Confidence            9642              12456789999999999988653            233899999964333334456899999


Q ss_pred             HHHHHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHH
Q 023205          184 RAAETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAK  257 (286)
Q Consensus       184 ~~~E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~  257 (286)
                      ...+.+.+.      ..|+++++++||.+..+.....   +    ......+..      .+|.    ...+.+++|+|+
T Consensus       168 aa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~---~----~~~~~~~~~------~~~~----~~r~~~p~dva~  230 (257)
T 3tl3_A          168 GGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLASL---P----EEARASLGK------QVPH----PSRLGNPDEYGA  230 (257)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC------C----HHHHHHHHH------TSSS----SCSCBCHHHHHH
T ss_pred             HHHHHHHHHHHHHhcccCcEEEEEEecCccChhhhhc---c----HHHHHHHHh------cCCC----CCCccCHHHHHH
Confidence            999986653      4689999999999976643211   0    011111111      1121    134689999999


Q ss_pred             HHHHHhcCCCCCCCeeEecccccccc
Q 023205          258 VAVRAATDPVFPPGIVDVHGILRYSQ  283 (286)
Q Consensus       258 ~~~~~l~~~~~~~~~~~l~~~~~~s~  283 (286)
                      +++.++..+...|+++++.|+..+++
T Consensus       231 ~v~~l~s~~~itG~~i~vdGG~~~~~  256 (257)
T 3tl3_A          231 LAVHIIENPMLNGEVIRLDGAIRMAP  256 (257)
T ss_dssp             HHHHHHHCTTCCSCEEEESTTC----
T ss_pred             HHHHHhcCCCCCCCEEEECCCccCCC
Confidence            99999988777899999999887764

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=99.91  E-value=1.3e-23  Score=175.74  Aligned_cols=211  Identities=16%  Similarity=0.051  Sum_probs=153.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc---c--ccCCceeEEeccCCCHhHHHHHhc-------CCC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR---D--SWANNVIWHQGNLLSSDSWKEALD-------GVT  123 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~---~--~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d  123 (286)
                      .++|+||||+|+||++++++|+++|++|++++|+.++...   +  ....++.++.+|++|.++++++++       ++|
T Consensus        14 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD   93 (260)
T 2zat_A           14 NKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHGGVD   93 (260)
T ss_dssp             TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            5789999999999999999999999999999998643211   0  113468899999999998887775       799


Q ss_pred             EEEEccccCCC-----------cchhhhhhhHHHHHHHHHHH----HcCCCEEEEEecCCcCCCCccccchHHHHHHHHH
Q 023205          124 AVISCVGGFGS-----------NSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEGKRAAET  188 (286)
Q Consensus       124 ~vi~~a~~~~~-----------~~~~~~~~~~~~~~l~~~a~----~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~  188 (286)
                      +||||||....           +...+++|+.++.++++++.    +.+.++||++||........+...|+.+|...|.
T Consensus        94 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~  173 (260)
T 2zat_A           94 ILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFPNLGPYNVSKTALLG  173 (260)
T ss_dssp             EEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEechhhcCCCCCchhHHHHHHHHHH
Confidence            99999986421           13467899999988888764    4567799999995333333456789999999998


Q ss_pred             HHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHH
Q 023205          189 ELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRA  262 (286)
Q Consensus       189 ~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~  262 (286)
                      +.+.      ..|+++++++||.+.++.....+ ..    ......+..      ..|     ...+.+++|+|++++.+
T Consensus       174 ~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~-~~----~~~~~~~~~------~~~-----~~~~~~~~dva~~v~~l  237 (260)
T 2zat_A          174 LTKNLAVELAPRNIRVNCLAPGLIKTNFSQVLW-MD----KARKEYMKE------SLR-----IRRLGNPEDCAGIVSFL  237 (260)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECSBCSSTTHHHH-SS----HHHHHHHHH------HHT-----CSSCBCGGGGHHHHHHH
T ss_pred             HHHHHHHHhcccCeEEEEEEECcccCccchhcc-cC----hHHHHHHHh------cCC-----CCCCCCHHHHHHHHHHH
Confidence            7753      35899999999999876431100 00    000011111      011     13478999999999999


Q ss_pred             hcCCC--CCCCeeEeccccccc
Q 023205          263 ATDPV--FPPGIVDVHGILRYS  282 (286)
Q Consensus       263 l~~~~--~~~~~~~l~~~~~~s  282 (286)
                      +..+.  ..|+++++.|+..++
T Consensus       238 ~s~~~~~~tG~~~~vdgG~~~s  259 (260)
T 2zat_A          238 CSEDASYITGETVVVGGGTASR  259 (260)
T ss_dssp             TSGGGTTCCSCEEEESTTCCCC
T ss_pred             cCcccCCccCCEEEECCCcccc
Confidence            87643  368899999987665

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=99.91  E-value=1.7e-23  Score=173.64  Aligned_cols=206  Identities=15%  Similarity=0.090  Sum_probs=143.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEE-ecCCCcccc-----cccCCceeEEeccCCCHhHHHHHhc-------CC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASL-SRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------GV  122 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l-~R~~~~~~~-----~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~  122 (286)
                      .++|+||||+|+||++++++|+++|++|+++ .|+++....     .....++.++.+|++|+++++++++       ++
T Consensus         5 ~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   84 (247)
T 2hq1_A            5 GKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAFGRI   84 (247)
T ss_dssp             TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence            5789999999999999999999999999999 455433111     1113578999999999999888776       78


Q ss_pred             CEEEEccccCC----------CcchhhhhhhHHHHHHHHHHHH----cCCCEEEEEecCCcCCCCccccchHHHHHHHHH
Q 023205          123 TAVISCVGGFG----------SNSYMYKINGTANINAIRAASE----KGVKRFVYISAADFGVANYLLQGYYEGKRAAET  188 (286)
Q Consensus       123 d~vi~~a~~~~----------~~~~~~~~~~~~~~~l~~~a~~----~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~  188 (286)
                      |+||||||...          .....+++|+.++.++++++.+    .+.++||++||...-........|+.+|...|.
T Consensus        85 d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  164 (247)
T 2hq1_A           85 DILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGIIGNAGQANYAASKAGLIG  164 (247)
T ss_dssp             CEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC---------CHHHHHHHHHHHH
T ss_pred             CEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCCCCcHhHHHHHHHHH
Confidence            99999998642          2245678999998888777653    567799999995221222345789999999998


Q ss_pred             HHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHH
Q 023205          189 ELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRA  262 (286)
Q Consensus       189 ~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~  262 (286)
                      +.+.      ..|+++++++||.+.++.....        .   .........  ..|     ...+++++|+|++++.+
T Consensus       165 ~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~--------~---~~~~~~~~~--~~~-----~~~~~~~~dva~~~~~l  226 (247)
T 2hq1_A          165 FTKSIAKEFAAKGIYCNAVAPGIIKTDMTDVL--------P---DKVKEMYLN--NIP-----LKRFGTPEEVANVVGFL  226 (247)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECSBCCHHHHTS--------C---HHHHHHHHT--TST-----TSSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcCcEEEEEEEEEEeccchhhc--------c---hHHHHHHHh--hCC-----CCCCCCHHHHHHHHHHH
Confidence            7753      3589999999999875422100        0   111111111  111     23478999999999999


Q ss_pred             hcCCC--CCCCeeEecccc
Q 023205          263 ATDPV--FPPGIVDVHGIL  279 (286)
Q Consensus       263 l~~~~--~~~~~~~l~~~~  279 (286)
                      +..+.  ..|++|++.|+.
T Consensus       227 ~~~~~~~~~G~~~~v~gG~  245 (247)
T 2hq1_A          227 ASDDSNYITGQVINIDGGL  245 (247)
T ss_dssp             HSGGGTTCCSCEEEESTTC
T ss_pred             cCcccccccCcEEEeCCCc
Confidence            87542  358899998875

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.91  E-value=4.9e-23  Score=172.96  Aligned_cols=211  Identities=18%  Similarity=0.153  Sum_probs=152.7

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc------cccCCceeEEeccCCCHhHHHHHhc-------
Q 023205           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD-------  120 (286)
Q Consensus        54 ~~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~------~~~~~~~~~i~~Dl~d~~~~~~~~~-------  120 (286)
                      ..+++++||||+|+||++++++|+++|++|++++|+.++...      .....++.++.+|++|+++++++++       
T Consensus        19 l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   98 (267)
T 1vl8_A           19 LRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFG   98 (267)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            346789999999999999999999999999999998643211      1113468889999999998887775       


Q ss_pred             CCCEEEEccccCCC----------cchhhhhhhHHHHHHHHHHH----HcCCCEEEEEecCC-cCCCCccccchHHHHHH
Q 023205          121 GVTAVISCVGGFGS----------NSYMYKINGTANINAIRAAS----EKGVKRFVYISAAD-FGVANYLLQGYYEGKRA  185 (286)
Q Consensus       121 ~~d~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~----~~~v~~~v~~Ss~~-~~~~~~~~~~y~~sK~~  185 (286)
                      ++|+||||||....          ....+++|+.++.++++++.    +.+.++||++||.. ..........|+.+|..
T Consensus        99 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~Y~asK~a  178 (267)
T 1vl8_A           99 KLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAASKGG  178 (267)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCSSSCHHHHHHHHH
T ss_pred             CCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCcchhccCCCCChhHHHHHHH
Confidence            68999999996532          12466899999998888774    34567999999964 22233456789999999


Q ss_pred             HHHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHH
Q 023205          186 AETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVA  259 (286)
Q Consensus       186 ~E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~  259 (286)
                      .|.+.+.      ..|+++++++||.+..+......       .. .+.......   ..|.     ..+++++|+|+++
T Consensus       179 ~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~-------~~-~~~~~~~~~---~~p~-----~~~~~p~dvA~~v  242 (267)
T 1vl8_A          179 VASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVF-------SD-PEKLDYMLK---RIPL-----GRTGVPEDLKGVA  242 (267)
T ss_dssp             HHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHH-------TC-HHHHHHHHH---TCTT-----SSCBCGGGGHHHH
T ss_pred             HHHHHHHHHHHhcccCeEEEEEEeccCccccccccc-------cC-hHHHHHHHh---hCCC-----CCCcCHHHHHHHH
Confidence            9987753      36899999999999766421100       00 011111111   1121     2468999999999


Q ss_pred             HHHhcCC--CCCCCeeEeccccc
Q 023205          260 VRAATDP--VFPPGIVDVHGILR  280 (286)
Q Consensus       260 ~~~l~~~--~~~~~~~~l~~~~~  280 (286)
                      +.++..+  ...|+.+.+.|+..
T Consensus       243 ~~l~s~~~~~itG~~i~vdGG~~  265 (267)
T 1vl8_A          243 VFLASEEAKYVTGQIIFVDGGWT  265 (267)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHcCccccCCcCCeEEECCCCC
Confidence            9999753  34688999988754

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.91  E-value=3.8e-23  Score=171.59  Aligned_cols=214  Identities=11%  Similarity=0.026  Sum_probs=151.9

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHh---cCCCEEEEcccc
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEAL---DGVTAVISCVGG  131 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~---~~~d~vi~~a~~  131 (286)
                      ..++++||||+|+||++++++|+++|++|++++|+.++........++.++.+|++|++++++++   .++|+||||||.
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~lv~~Ag~   84 (246)
T 2ag5_A            5 DGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQFANEVERLDVLFNVAGF   84 (246)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGSTTEEEEECCTTCHHHHHHHHHHCSCCSEEEECCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhccCceEEEeeCCCHHHHHHHHHHhCCCCEEEECCcc
Confidence            35789999999999999999999999999999998644221111237889999999999888664   478999999996


Q ss_pred             CCC----------cchhhhhhhHHHHHHHHHHH----HcCCCEEEEEecCCcCCCCc-cccchHHHHHHHHHHHHH----
Q 023205          132 FGS----------NSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANY-LLQGYYEGKRAAETELLT----  192 (286)
Q Consensus       132 ~~~----------~~~~~~~~~~~~~~l~~~a~----~~~v~~~v~~Ss~~~~~~~~-~~~~y~~sK~~~E~~~~~----  192 (286)
                      ...          ....+++|+.++.++++++.    +.+..+||++||........ +...|+.+|...|.+.+.    
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e  164 (246)
T 2ag5_A           85 VHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAAD  164 (246)
T ss_dssp             CCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCTTBHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechHhCcCCCCCCccHHHHHHHHHHHHHHHHHH
Confidence            532          12456899999998888875    34667999999953222223 567899999999987753    


Q ss_pred             --hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcCCC--C
Q 023205          193 --RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDPV--F  268 (286)
Q Consensus       193 --~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~~--~  268 (286)
                        ..|++++++|||.++++.........    ....+.......   ..|.     ..+.+++|+|++++.++..+.  .
T Consensus       165 ~~~~gi~v~~v~Pg~v~t~~~~~~~~~~----~~~~~~~~~~~~---~~~~-----~~~~~~~dvA~~v~~l~s~~~~~~  232 (246)
T 2ag5_A          165 FIQQGIRCNCVCPGTVDTPSLQERIQAR----GNPEEARNDFLK---RQKT-----GRFATAEEIAMLCVYLASDESAYV  232 (246)
T ss_dssp             HGGGTEEEEEEEESCEECHHHHHHHHHS----SSHHHHHHHHHH---TCTT-----SSCEEHHHHHHHHHHHHSGGGTTC
T ss_pred             hhhcCcEEEEEeeCcCcCcchhhhhhcc----cCcHHHHHHHHh---cCCC-----CCCCCHHHHHHHHHHHhCccccCC
Confidence              35899999999999986421100000    000011111111   1121     246899999999999997543  4


Q ss_pred             CCCeeEeccccc
Q 023205          269 PPGIVDVHGILR  280 (286)
Q Consensus       269 ~~~~~~l~~~~~  280 (286)
                      .|+.+++.|+..
T Consensus       233 tG~~i~vdgG~~  244 (246)
T 2ag5_A          233 TGNPVIIDGGWS  244 (246)
T ss_dssp             CSCEEEECTTGG
T ss_pred             CCCEEEECCCcc
Confidence            689999988753

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=99.91  E-value=1.6e-23  Score=179.07  Aligned_cols=214  Identities=14%  Similarity=0.074  Sum_probs=152.1

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc---c---ccCCceeEEeccCCCHhHHHHHhcC-------
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR---D---SWANNVIWHQGNLLSSDSWKEALDG-------  121 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~---~---~~~~~~~~i~~Dl~d~~~~~~~~~~-------  121 (286)
                      ..++|+||||+|+||++++++|+++|++|++++|+.++...   +   ....++.++.+|++|.++++++++.       
T Consensus        25 ~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~  104 (302)
T 1w6u_A           25 QGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGH  104 (302)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTCS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHHcCC
Confidence            35789999999999999999999999999999998643211   0   0135789999999999988887764       


Q ss_pred             CCEEEEccccCCC----------cchhhhhhhHHHHHHHHHHHH-----cCCCEEEEEecCCcCCCCccccchHHHHHHH
Q 023205          122 VTAVISCVGGFGS----------NSYMYKINGTANINAIRAASE-----KGVKRFVYISAADFGVANYLLQGYYEGKRAA  186 (286)
Q Consensus       122 ~d~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~~-----~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~  186 (286)
                      +|+||||||....          ....+++|+.++.++++++..     .+..+||++||........+...|+.+|...
T Consensus       105 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~  184 (302)
T 1w6u_A          105 PNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGV  184 (302)
T ss_dssp             CSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTTCHHHHHHHHHH
T ss_pred             CCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccccCCCCcchhHHHHHHH
Confidence            5999999985421          135678999999988887753     2446999999953222234567899999999


Q ss_pred             HHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHH
Q 023205          187 ETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAV  260 (286)
Q Consensus       187 E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~  260 (286)
                      |.+.+.      ..|++++++|||.++++....... +    ....  ......   ..|.     ..+++++|+|++++
T Consensus       185 ~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~-~----~~~~--~~~~~~---~~p~-----~~~~~~~dva~~~~  249 (302)
T 1w6u_A          185 EAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLD-P----TGTF--EKEMIG---RIPC-----GRLGTVEELANLAA  249 (302)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECCBCC------CC-T----TSHH--HHHHHT---TCTT-----SSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHhhhcCcEEEEEeeccCCCcchhhhcc-c----chhh--HHHHHh---cCCc-----CCCCCHHHHHHHHH
Confidence            987753      368999999999998873221110 0    0000  001111   1121     24689999999999


Q ss_pred             HHhcCCC--CCCCeeEecccccccc
Q 023205          261 RAATDPV--FPPGIVDVHGILRYSQ  283 (286)
Q Consensus       261 ~~l~~~~--~~~~~~~l~~~~~~s~  283 (286)
                      .++..+.  ..|++|++.|+..++.
T Consensus       250 ~l~~~~~~~~~G~~~~v~gg~~~~~  274 (302)
T 1w6u_A          250 FLCSDYASWINGAVIKFDGGEEVLI  274 (302)
T ss_dssp             HHTSGGGTTCCSCEEEESTTHHHHH
T ss_pred             HHcCCcccccCCCEEEECCCeeecc
Confidence            9997543  3588999999877664

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=99.91  E-value=3.5e-23  Score=173.88  Aligned_cols=218  Identities=14%  Similarity=0.077  Sum_probs=152.1

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc---c--cc--CCceeEEeccCCCHhHHHHHhc-------
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR---D--SW--ANNVIWHQGNLLSSDSWKEALD-------  120 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~---~--~~--~~~~~~i~~Dl~d~~~~~~~~~-------  120 (286)
                      ..++++||||+|+||++++++|+++|++|++++|+.++...   +  ..  ..++.++.+|++|+++++++++       
T Consensus        12 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   91 (267)
T 1iy8_A           12 TDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFG   91 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            35789999999999999999999999999999998643211   0  01  3578899999999999888775       


Q ss_pred             CCCEEEEccccCCC-----------cchhhhhhhHHHHHHHHHH----HHcCCCEEEEEecCCcCCCCccccchHHHHHH
Q 023205          121 GVTAVISCVGGFGS-----------NSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKRA  185 (286)
Q Consensus       121 ~~d~vi~~a~~~~~-----------~~~~~~~~~~~~~~l~~~a----~~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~  185 (286)
                      ++|+||||||....           ....+++|+.++.++.+++    ++.+..+||++||............|+.+|..
T Consensus        92 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a  171 (267)
T 1iy8_A           92 RIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAKHG  171 (267)
T ss_dssp             CCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCSSBHHHHHHHHH
T ss_pred             CCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhccCCCCCccHHHHHHH
Confidence            68999999986532           1245688998887665554    45567899999995332333456789999999


Q ss_pred             HHHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHH
Q 023205          186 AETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVA  259 (286)
Q Consensus       186 ~E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~  259 (286)
                      .+.+.+.      ..|+++++++||.+.++........   ..............  ...|.     ..+.+++|+|+++
T Consensus       172 ~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~---~~~~~~~~~~~~~~--~~~p~-----~r~~~~~dvA~~v  241 (267)
T 1iy8_A          172 VVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQ---LDPENPRKAAEEFI--QVNPS-----KRYGEAPEIAAVV  241 (267)
T ss_dssp             HHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHH---HCTTCHHHHHHHHH--TTCTT-----CSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhcCeEEEEEEeCCCcCcchhccccc---cChhhhhhHHHHHh--ccCCC-----CCCcCHHHHHHHH
Confidence            9987653      4689999999999986532110000   00001110000000  11121     2468999999999


Q ss_pred             HHHhcCC--CCCCCeeEeccccccc
Q 023205          260 VRAATDP--VFPPGIVDVHGILRYS  282 (286)
Q Consensus       260 ~~~l~~~--~~~~~~~~l~~~~~~s  282 (286)
                      +.++..+  ...|+.+++.|+..++
T Consensus       242 ~~l~s~~~~~~tG~~i~vdGG~~~~  266 (267)
T 1iy8_A          242 AFLLSDDASYVNATVVPIDGGQSAA  266 (267)
T ss_dssp             HHHTSGGGTTCCSCEEEESTTTTTB
T ss_pred             HHHcCccccCCCCCEEEECCCcccC
Confidence            9998754  3468999999986654

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=99.91  E-value=4.3e-24  Score=179.47  Aligned_cols=217  Identities=11%  Similarity=0.079  Sum_probs=153.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc------cc-cCCceeEEeccCCCHhHHHHHhc-------C
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DS-WANNVIWHQGNLLSSDSWKEALD-------G  121 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~------~~-~~~~~~~i~~Dl~d~~~~~~~~~-------~  121 (286)
                      .++|+||||+|+||++++++|+++|++|++++|+.++...      .. ...++.++.+|++|+++++++++       .
T Consensus         7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   86 (267)
T 2gdz_A            7 GKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFGR   86 (267)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHcCC
Confidence            4689999999999999999999999999999998643211      10 12368899999999998888775       4


Q ss_pred             CCEEEEccccCC--CcchhhhhhhHHHHHHHHH----HHHcC---CCEEEEEecCCcCCCCccccchHHHHHHHHHHHHH
Q 023205          122 VTAVISCVGGFG--SNSYMYKINGTANINAIRA----ASEKG---VKRFVYISAADFGVANYLLQGYYEGKRAAETELLT  192 (286)
Q Consensus       122 ~d~vi~~a~~~~--~~~~~~~~~~~~~~~l~~~----a~~~~---v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~~  192 (286)
                      +|+||||||...  .....+++|+.++..+.+.    +++.+   ..+||++||............|+.+|...|.+.+.
T Consensus        87 id~lv~~Ag~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~  166 (267)
T 2gdz_A           87 LDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRS  166 (267)
T ss_dssp             CCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHH
T ss_pred             CCEEEECCCCCChhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCCCCCCchHHHHHHHHHHHHHH
Confidence            799999999753  3456788998877655544    43432   56899999953222334456799999999886642


Q ss_pred             --------hCCCcEEEEeeCeeecCCCCCccccCccccCc---hHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHH
Q 023205          193 --------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGS---PMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVR  261 (286)
Q Consensus       193 --------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~  261 (286)
                              ..|+++++++||.+.++.....  ........   ....+..      .+     ....+++++|+|++++.
T Consensus       167 ~ala~e~~~~gi~v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~~~~~~~~------~~-----~~~~~~~~~dvA~~v~~  233 (267)
T 2gdz_A          167 AALAANLMNSGVRLNAICPGFVNTAILESI--EKEENMGQYIEYKDHIKD------MI-----KYYGILDPPLIANGLIT  233 (267)
T ss_dssp             HHHHHHHHTCCEEEEEEEESCBSSHHHHGG--GCHHHHGGGGGGHHHHHH------HH-----HHHCCBCHHHHHHHHHH
T ss_pred             HHHHHHhccCCcEEEEEecCcCcchhhhcc--ccccccchhhhHHHHHHH------Hh-----ccccCCCHHHHHHHHHH
Confidence                    4789999999999976532100  00000000   0000000      00     12346899999999999


Q ss_pred             HhcCCCCCCCeeEecccccccccC
Q 023205          262 AATDPVFPPGIVDVHGILRYSQKS  285 (286)
Q Consensus       262 ~l~~~~~~~~~~~l~~~~~~s~~~  285 (286)
                      ++.++...|+++++.+++.++++.
T Consensus       234 l~s~~~~~G~~~~v~gg~~~~~~~  257 (267)
T 2gdz_A          234 LIEDDALNGAIMKITTSKGIHFQD  257 (267)
T ss_dssp             HHHCTTCSSCEEEEETTTEEEECC
T ss_pred             HhcCcCCCCcEEEecCCCcccccC
Confidence            998877789999999999888765

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=99.91  E-value=3.7e-23  Score=172.87  Aligned_cols=214  Identities=14%  Similarity=0.032  Sum_probs=155.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEE-ecCCCcccc-----cccCCceeEEeccCCCHhHHHHHhc-------CC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASL-SRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------GV  122 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l-~R~~~~~~~-----~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~  122 (286)
                      .+++|||||+|+||++++++|+++|++|+++ .|+.+....     .....++.++.+|++|+++++++++       .+
T Consensus         4 ~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   83 (258)
T 3oid_A            4 NKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFGRL   83 (258)
T ss_dssp             CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            5789999999999999999999999999987 666433111     1123578999999999998888775       46


Q ss_pred             CEEEEccccCCC----------cchhhhhhhHHHHHHHHHHH----HcCCCEEEEEecCCcCCCCccccchHHHHHHHHH
Q 023205          123 TAVISCVGGFGS----------NSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEGKRAAET  188 (286)
Q Consensus       123 d~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~----~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~  188 (286)
                      |++|||||....          ....+++|+.++.++++++.    +.+..+||++||...-........|+.+|...+.
T Consensus        84 d~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~  163 (258)
T 3oid_A           84 DVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIRYLENYTTVGVSKAALEA  163 (258)
T ss_dssp             CEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGGTSBCTTCHHHHHHHHHHHH
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhCCCCCCcHHHHHHHHHHHH
Confidence            999999985421          13457899999999988874    4455699999996433334456789999999998


Q ss_pred             HHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHH
Q 023205          189 ELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRA  262 (286)
Q Consensus       189 ~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~  262 (286)
                      +.+.      ..|+++++++||.+..+.....        ....+.......   ..|     ...+.+++|+|++++.+
T Consensus       164 l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~--------~~~~~~~~~~~~---~~p-----~~r~~~~~dva~~v~~L  227 (258)
T 3oid_A          164 LTRYLAVELSPKQIIVNAVSGGAIDTDALKHF--------PNREDLLEDARQ---NTP-----AGRMVEIKDMVDTVEFL  227 (258)
T ss_dssp             HHHHHHHHTGGGTEEEEEEEECCBCSGGGGGC--------TTHHHHHHHHHH---HCT-----TSSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHhhcCcEEEEEeeCCCcChhhhhc--------ccCHHHHHHHHh---cCC-----CCCCcCHHHHHHHHHHH
Confidence            7753      4589999999999976543211        011111111111   112     13468999999999999


Q ss_pred             hcCCC--CCCCeeEecccccccccC
Q 023205          263 ATDPV--FPPGIVDVHGILRYSQKS  285 (286)
Q Consensus       263 l~~~~--~~~~~~~l~~~~~~s~~~  285 (286)
                      +..+.  ..|+++++.|+....+.+
T Consensus       228 ~s~~~~~itG~~i~vdGG~~~~~~~  252 (258)
T 3oid_A          228 VSSKADMIRGQTIIVDGGRSLLVLE  252 (258)
T ss_dssp             TSSTTTTCCSCEEEESTTGGGBCC-
T ss_pred             hCcccCCccCCEEEECCCccCCCCC
Confidence            97643  568999999988776643

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=99.91  E-value=7.9e-23  Score=170.33  Aligned_cols=203  Identities=21%  Similarity=0.184  Sum_probs=148.5

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhc-------CCCEEEE
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD-------GVTAVIS  127 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d~vi~  127 (286)
                      ++++|+||||+|+||++++++|+++|++|++++|+.++.      ..+.++.+|++|+++++++++       .+|+|||
T Consensus        20 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~------~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~lv~   93 (253)
T 2nm0_A           20 MSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPP------EGFLAVKCDITDTEQVEQAYKEIEETHGPVEVLIA   93 (253)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCC------TTSEEEECCTTSHHHHHHHHHHHHHHTCSCSEEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhh------ccceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            467899999999999999999999999999999986542      247899999999998887775       4699999


Q ss_pred             ccccCC----------CcchhhhhhhHHHHHHHHHHHH----cCCCEEEEEecCCcCCCCccccchHHHHHHHHHHHHH-
Q 023205          128 CVGGFG----------SNSYMYKINGTANINAIRAASE----KGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLT-  192 (286)
Q Consensus       128 ~a~~~~----------~~~~~~~~~~~~~~~l~~~a~~----~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~~-  192 (286)
                      |||...          .....+++|+.++.++++++..    .+..+||++||............|+.+|...+.+.+. 
T Consensus        94 nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~l  173 (253)
T 2nm0_A           94 NAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLLGSAGQANYAASKAGLVGFARSL  173 (253)
T ss_dssp             ECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCCCCcHHHHHHHHHHHHHHHHH
Confidence            998642          2345678999999988887643    4667999999953222233456899999999987653 


Q ss_pred             -----hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcCCC
Q 023205          193 -----RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDPV  267 (286)
Q Consensus       193 -----~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~~  267 (286)
                           ..|+++++++||.+..+.....   +    ......+.      ...|.     ..+++++|+|++++.++..+.
T Consensus       174 a~e~~~~gi~vn~v~PG~v~T~~~~~~---~----~~~~~~~~------~~~p~-----~~~~~p~dvA~~i~~l~s~~~  235 (253)
T 2nm0_A          174 ARELGSRNITFNVVAPGFVDTDMTKVL---T----DEQRANIV------SQVPL-----GRYARPEEIAATVRFLASDDA  235 (253)
T ss_dssp             HHHHCSSSEEEEEEEECSBCC----------------CHHHHH------TTCTT-----CSCBCHHHHHHHHHHHHSGGG
T ss_pred             HHHhhhcCeEEEEEEeCcCcCcchhhc---C----HHHHHHHH------hcCCC-----CCCcCHHHHHHHHHHHhCccc
Confidence                 4689999999999876532110   0    00011110      01121     247899999999999997643


Q ss_pred             --CCCCeeEecccccc
Q 023205          268 --FPPGIVDVHGILRY  281 (286)
Q Consensus       268 --~~~~~~~l~~~~~~  281 (286)
                        ..|+.+.+.|+..+
T Consensus       236 ~~~tG~~i~vdGG~~~  251 (253)
T 2nm0_A          236 SYITGAVIPVDGGLGM  251 (253)
T ss_dssp             TTCCSCEEEESTTTTC
T ss_pred             cCCcCcEEEECCcccc
Confidence              46899999988654

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=99.91  E-value=2.2e-23  Score=173.33  Aligned_cols=209  Identities=16%  Similarity=0.157  Sum_probs=150.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc---cc-cCCceeEEeccCCCHhHHHHHhc-------CCCE
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR---DS-WANNVIWHQGNLLSSDSWKEALD-------GVTA  124 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~---~~-~~~~~~~i~~Dl~d~~~~~~~~~-------~~d~  124 (286)
                      .++|+||||+|+||++++++|+++|++|++++|+.+....   .. ...++.++.+|++|++++.++++       .+|+
T Consensus         6 ~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   85 (251)
T 1zk4_A            6 GKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPVST   85 (251)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred             CcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHHHhCCCCE
Confidence            5789999999999999999999999999999998643211   00 11578999999999998888776       4899


Q ss_pred             EEEccccCCC----------cchhhhhhhHHHHHHHHHH----HHcCC-CEEEEEecCCcCCCCccccchHHHHHHHHHH
Q 023205          125 VISCVGGFGS----------NSYMYKINGTANINAIRAA----SEKGV-KRFVYISAADFGVANYLLQGYYEGKRAAETE  189 (286)
Q Consensus       125 vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a----~~~~v-~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~  189 (286)
                      ||||||....          ....+++|+.++.++.+.+    ++.+. ++||++||........+...|+.+|...|.+
T Consensus        86 li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~  165 (251)
T 1zk4_A           86 LVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIM  165 (251)
T ss_dssp             EEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhccCCCCCccchHHHHHHHHH
Confidence            9999986421          1346788999887666654    34555 7999999953222334567899999999987


Q ss_pred             HHH--------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHH
Q 023205          190 LLT--------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVR  261 (286)
Q Consensus       190 ~~~--------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~  261 (286)
                      .+.        ..|++++++|||.++++.....        ..  .......  ....|     ...+++++|+|++++.
T Consensus       166 ~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~~--------~~--~~~~~~~--~~~~~-----~~~~~~~~dva~~~~~  228 (251)
T 1zk4_A          166 SKSAALDCALKDYDVRVNTVHPGYIKTPLVDDL--------PG--AEEAMSQ--RTKTP-----MGHIGEPNDIAYICVY  228 (251)
T ss_dssp             HHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTS--------TT--HHHHHTS--TTTCT-----TSSCBCHHHHHHHHHH
T ss_pred             HHHHHHHhcccCCCeEEEEEeeCcCcchhhhhc--------Cc--hhhhHHH--hhcCC-----CCCCcCHHHHHHHHHH
Confidence            642        4689999999999987643210        00  0111101  11122     2347899999999999


Q ss_pred             HhcCCC--CCCCeeEecccccc
Q 023205          262 AATDPV--FPPGIVDVHGILRY  281 (286)
Q Consensus       262 ~l~~~~--~~~~~~~l~~~~~~  281 (286)
                      ++..+.  ..|+.+++.|+...
T Consensus       229 l~~~~~~~~~G~~~~v~gG~~~  250 (251)
T 1zk4_A          229 LASNESKFATGSEFVVDGGYTA  250 (251)
T ss_dssp             HHSGGGTTCCSCEEEESTTGGG
T ss_pred             HcCcccccccCcEEEECCCccC
Confidence            997643  45889999987643

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=99.91  E-value=1.5e-23  Score=176.04  Aligned_cols=212  Identities=17%  Similarity=0.073  Sum_probs=151.9

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhc-------CCCEEE
Q 023205           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD-------GVTAVI  126 (286)
Q Consensus        54 ~~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d~vi  126 (286)
                      ...++|+||||+|+||++++++|+++|++|++++|+.....      ....+.+|++|.+++.++++       ++|++|
T Consensus        26 l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~------~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iD~lv   99 (266)
T 3uxy_A           26 FEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIA------ADLHLPGDLREAAYADGLPGAVAAGLGRLDIVV   99 (266)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSC------CSEECCCCTTSHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH------hhhccCcCCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence            34679999999999999999999999999999999865522      22445899999988776664       689999


Q ss_pred             EccccCCC----------cchhhhhhhHHHHHHHHHH----HHcCCCEEEEEecCCcCCCCccccchHHHHHHHHHHHHH
Q 023205          127 SCVGGFGS----------NSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLT  192 (286)
Q Consensus       127 ~~a~~~~~----------~~~~~~~~~~~~~~l~~~a----~~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~~  192 (286)
                      ||||....          ....+++|+.++.++++++    ++.+..+||++||...-........|+.+|...+.+.+.
T Consensus       100 nnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~  179 (266)
T 3uxy_A          100 NNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWGLRPGPGHALYCLTKAALASLTQC  179 (266)
T ss_dssp             ECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTBCCTTBHHHHHHHHHHHHHHHH
T ss_pred             ECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCCCCChHHHHHHHHHHHHHHH
Confidence            99997532          1345689999999999887    455667999999964333344567899999999987753


Q ss_pred             ------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcCC
Q 023205          193 ------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDP  266 (286)
Q Consensus       193 ------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~  266 (286)
                            ..|+++++++||.+.++..........   ....+......   ...|     ...+.+++|+|++++.++..+
T Consensus       180 la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~---~~~~~~~~~~~---~~~p-----~~r~~~pedvA~~v~~L~s~~  248 (266)
T 3uxy_A          180 MGMDHAPQGIRINAVCPNEVNTPMLRTGFAKRG---FDPDRAVAELG---RTVP-----LGRIAEPEDIADVVLFLASDA  248 (266)
T ss_dssp             HHHHHGGGTEEEEEEEESSBCCHHHHHHHHHTT---CCHHHHHHHHH---TTST-----TSSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHhhhcCcEEEEEeeCCCcchHhhhhhhccc---ccchHHHHHHH---hcCC-----CCCCcCHHHHHHHHHHHhCch
Confidence                  458999999999998653211000000   00000011111   1112     235789999999999999764


Q ss_pred             C--CCCCeeEeccccccc
Q 023205          267 V--FPPGIVDVHGILRYS  282 (286)
Q Consensus       267 ~--~~~~~~~l~~~~~~s  282 (286)
                      .  ..|+++++.|+..++
T Consensus       249 ~~~itG~~i~vdGG~~~s  266 (266)
T 3uxy_A          249 ARYLCGSLVEVNGGKAVA  266 (266)
T ss_dssp             GTTCCSCEEEESTTCCCC
T ss_pred             hcCCcCCEEEECcCEeCC
Confidence            3  468999999987653

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=99.91  E-value=4e-23  Score=172.83  Aligned_cols=210  Identities=13%  Similarity=0.050  Sum_probs=151.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEec-CCCcccc-----cccCCceeEEeccCCCHhHHHHHhc-------CC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSR-SGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------GV  122 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R-~~~~~~~-----~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~  122 (286)
                      .++|+||||+|+||++++++|+++|++|++++| +.+....     .....++.++.+|++|++++.++++       ++
T Consensus         7 ~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   86 (261)
T 1gee_A            7 GKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGKL   86 (261)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            578999999999999999999999999999999 4332110     0113468899999999998888776       78


Q ss_pred             CEEEEccccCCC----------cchhhhhhhHHHHHHHHHHHH----cC-CCEEEEEecCCcCCCCccccchHHHHHHHH
Q 023205          123 TAVISCVGGFGS----------NSYMYKINGTANINAIRAASE----KG-VKRFVYISAADFGVANYLLQGYYEGKRAAE  187 (286)
Q Consensus       123 d~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~~----~~-v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E  187 (286)
                      |+||||||....          ....+++|+.++.++++++..    .+ ..+||++||........+...|+.+|...|
T Consensus        87 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~  166 (261)
T 1gee_A           87 DVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMK  166 (261)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHHHHHHHHHH
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcCCCCCccHHHHHHHHHH
Confidence            999999986532          124668999999888777653    34 579999999643333455678999999988


Q ss_pred             HHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHH
Q 023205          188 TELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVR  261 (286)
Q Consensus       188 ~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~  261 (286)
                      .+.+.      ..|++++++|||.++++......       .. .........   ..|.     ..+++++|+|++++.
T Consensus       167 ~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~-------~~-~~~~~~~~~---~~~~-----~~~~~~~dva~~~~~  230 (261)
T 1gee_A          167 LMTETLALEYAPKGIRVNNIGPGAINTPINAEKF-------AD-PEQRADVES---MIPM-----GYIGEPEEIAAVAAW  230 (261)
T ss_dssp             HHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHH-------HS-HHHHHHHHT---TCTT-----SSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHhcccCeEEEEEeeCCcCCchhhhcc-------cC-hhHHHHHHh---cCCC-----CCCcCHHHHHHHHHH
Confidence            86643      35899999999999886431100       00 011111111   1121     347899999999999


Q ss_pred             HhcCC--CCCCCeeEecccccc
Q 023205          262 AATDP--VFPPGIVDVHGILRY  281 (286)
Q Consensus       262 ~l~~~--~~~~~~~~l~~~~~~  281 (286)
                      ++..+  ...|+++++.|+..+
T Consensus       231 l~~~~~~~~~G~~~~v~gg~~~  252 (261)
T 1gee_A          231 LASSEASYVTGITLFADGGMTL  252 (261)
T ss_dssp             HHSGGGTTCCSCEEEESTTGGG
T ss_pred             HhCccccCCCCcEEEEcCCccc
Confidence            99753  346889999987654

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=99.91  E-value=1.3e-23  Score=177.37  Aligned_cols=217  Identities=17%  Similarity=0.103  Sum_probs=151.6

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc---c--ccCCceeEEeccCCCHhHHHHHhc-------CC
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR---D--SWANNVIWHQGNLLSSDSWKEALD-------GV  122 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~---~--~~~~~~~~i~~Dl~d~~~~~~~~~-------~~  122 (286)
                      ..++++||||+|+||++++++|+++|++|++++|+.++...   +  ....++.++.+|++|+++++++++       ++
T Consensus        21 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i  100 (277)
T 2rhc_B           21 DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPV  100 (277)
T ss_dssp             TSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            35789999999999999999999999999999998643211   1  113468899999999998887775       68


Q ss_pred             CEEEEccccCCC----------cchhhhhhhHHHHHHHHHHHHc------CCCEEEEEecCCcCCCCccccchHHHHHHH
Q 023205          123 TAVISCVGGFGS----------NSYMYKINGTANINAIRAASEK------GVKRFVYISAADFGVANYLLQGYYEGKRAA  186 (286)
Q Consensus       123 d~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~~~------~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~  186 (286)
                      |+||||||....          ....+++|+.++.++++++.+.      +..+||++||............|+.+|...
T Consensus       101 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~  180 (277)
T 2rhc_B          101 DVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGV  180 (277)
T ss_dssp             SEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGGTSCCTTCHHHHHHHHHH
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECccccccCCCCCccHHHHHHHH
Confidence            999999986432          1356789999999999887654      557999999953222334557899999999


Q ss_pred             HHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccC-chHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHH
Q 023205          187 ETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIG-SPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVA  259 (286)
Q Consensus       187 E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~  259 (286)
                      +.+.+.      ..|+++++++||.+.++.............. ...+......   ...|     ...+++++|+|+++
T Consensus       181 ~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~p-----~~r~~~~~dvA~~v  252 (277)
T 2rhc_B          181 VGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRIT---ARVP-----IGRYVQPSEVAEMV  252 (277)
T ss_dssp             HHHHHHHHHHHTTTEEEEEEEEECSBCSHHHHHHHHHHHHHHTCCHHHHHHHHH---HHST-----TSSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCcEEEEEecCcCcCchhhhhhhhcccccccchHHHHHHHH---hcCC-----CCCCcCHHHHHHHH
Confidence            987653      3689999999999986532100000000000 0000000000   0112     23578999999999


Q ss_pred             HHHhcCC--CCCCCeeEecccc
Q 023205          260 VRAATDP--VFPPGIVDVHGIL  279 (286)
Q Consensus       260 ~~~l~~~--~~~~~~~~l~~~~  279 (286)
                      +.++..+  ...|+++++.|+.
T Consensus       253 ~~l~s~~~~~~tG~~~~vdGG~  274 (277)
T 2rhc_B          253 AYLIGPGAAAVTAQALNVCGGL  274 (277)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTC
T ss_pred             HHHhCchhcCCCCcEEEECCCc
Confidence            9999764  3468899998874

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=99.91  E-value=1.7e-22  Score=169.35  Aligned_cols=211  Identities=16%  Similarity=0.107  Sum_probs=150.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhc-------CCCEEEEc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD-------GVTAVISC  128 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d~vi~~  128 (286)
                      .++||||||+|+||++++++|+++|++|++++|+.++      ..++.++.+|++|+++++++++       ++|+||||
T Consensus         8 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~------~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~~   81 (264)
T 2dtx_A            8 DKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG------EAKYDHIECDVTNPDQVKASIDHIFKEYGSISVLVNN   81 (264)
T ss_dssp             TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC------SCSSEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc------CCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            5789999999999999999999999999999998654      3478899999999998888776       68999999


Q ss_pred             cccCCC----------cchhhhhhhHHHHHHHHHHHH----cCCCEEEEEecCCcCCCCccccchHHHHHHHHHHHHH--
Q 023205          129 VGGFGS----------NSYMYKINGTANINAIRAASE----KGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLT--  192 (286)
Q Consensus       129 a~~~~~----------~~~~~~~~~~~~~~l~~~a~~----~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~~--  192 (286)
                      ||....          ....+++|+.++.++++++..    .+..+||++||........+...|+.+|...|.+.+.  
T Consensus        82 Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la  161 (264)
T 2dtx_A           82 AGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASIITKNASAYVTSKHAVIGLTKSIA  161 (264)
T ss_dssp             CCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchhccCCCCchhHHHHHHHHHHHHHHHH
Confidence            986432          235678999999988888754    3567999999953333334567899999999987653  


Q ss_pred             ----hCCCcEEEEeeCeeecCCCCCccccCccccCchH-HHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcCC-
Q 023205          193 ----RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPM-EMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDP-  266 (286)
Q Consensus       193 ----~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~-  266 (286)
                          .. +++++++||.+.++................. +.......   ..|     ...+++++|+|++++.++..+ 
T Consensus       162 ~e~~~~-i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~p-----~~~~~~p~dvA~~v~~l~s~~~  232 (264)
T 2dtx_A          162 LDYAPL-LRCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGH---EHP-----MQRIGKPQEVASAVAFLASREA  232 (264)
T ss_dssp             HHHTTT-SEEEEEEECSBCSHHHHHHHHHHHCSCHHHHHHHHHHHHH---HST-----TSSCBCHHHHHHHHHHHHSGGG
T ss_pred             HHhcCC-cEEEEEEeCCCcCcchhhhhhcccccCchhhHHHHHHHHh---cCC-----CCCCcCHHHHHHHHHHHhCchh
Confidence                23 9999999999975421100000000000000 00000000   112     134789999999999999754 


Q ss_pred             -CCCCCeeEecccccc
Q 023205          267 -VFPPGIVDVHGILRY  281 (286)
Q Consensus       267 -~~~~~~~~l~~~~~~  281 (286)
                       ...|+.+++.|+..+
T Consensus       233 ~~~tG~~i~vdGG~~~  248 (264)
T 2dtx_A          233 SFITGTCLYVDGGLSI  248 (264)
T ss_dssp             TTCCSCEEEESTTGGG
T ss_pred             cCCCCcEEEECCCccc
Confidence             346889999987644

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=99.91  E-value=4.2e-23  Score=171.96  Aligned_cols=208  Identities=16%  Similarity=0.136  Sum_probs=148.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc--cccCCce-eEEeccCCCHhHHHHHh------cCCCEEE
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSWANNV-IWHQGNLLSSDSWKEAL------DGVTAVI  126 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~--~~~~~~~-~~i~~Dl~d~~~~~~~~------~~~d~vi  126 (286)
                      .++|+||||+|+||++++++|+++|++|++++|+.++...  +....++ .++.+|++|.+++++++      .++|+||
T Consensus        11 ~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~li   90 (254)
T 2wsb_A           11 GACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAAVAARIVADVTDAEAMTAAAAEAEAVAPVSILV   90 (254)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEEECCTTCHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceeEEEEecCCHHHHHHHHHHHHhhCCCcEEE
Confidence            5789999999999999999999999999999998653211  1112355 88999999999888776      4689999


Q ss_pred             EccccCCCc----------chhhhhhhHHHHHHHHHH----HHcCCCEEEEEecCC-c-CCCCccccchHHHHHHHHHHH
Q 023205          127 SCVGGFGSN----------SYMYKINGTANINAIRAA----SEKGVKRFVYISAAD-F-GVANYLLQGYYEGKRAAETEL  190 (286)
Q Consensus       127 ~~a~~~~~~----------~~~~~~~~~~~~~l~~~a----~~~~v~~~v~~Ss~~-~-~~~~~~~~~y~~sK~~~E~~~  190 (286)
                      ||||.....          ...+++|+.++.++++++    ++.+.++||++||.. + +.+..+...|+.+|...|.++
T Consensus        91 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~Y~~sK~a~~~~~  170 (254)
T 2wsb_A           91 NSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGTIVNRPQFASSYMASKGAVHQLT  170 (254)
T ss_dssp             ECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSSCBHHHHHHHHHHHHHH
T ss_pred             ECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEecchhccCCCCCcchHHHHHHHHHHHHH
Confidence            999865321          245679999977776655    445678999999953 2 222333478999999999877


Q ss_pred             HH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhc
Q 023205          191 LT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAAT  264 (286)
Q Consensus       191 ~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~  264 (286)
                      +.      ..|++++++|||.++++......       . ..........   ..|     ...+++++|+|++++.++.
T Consensus       171 ~~~~~~~~~~gi~v~~v~Pg~v~t~~~~~~~-------~-~~~~~~~~~~---~~~-----~~~~~~~~dva~~~~~l~~  234 (254)
T 2wsb_A          171 RALAAEWAGRGVRVNALAPGYVATEMTLKMR-------E-RPELFETWLD---MTP-----MGRCGEPSEIAAAALFLAS  234 (254)
T ss_dssp             HHHHHHHGGGTEEEEEEEECCBCSHHHHHHH-------T-CHHHHHHHHH---TST-----TSSCBCHHHHHHHHHHHHS
T ss_pred             HHHHHHHhhcCeEEEEEEecccCchhhhccc-------c-ChHHHHHHHh---cCC-----CCCCCCHHHHHHHHHHHhC
Confidence            53      35899999999999876431100       0 0011111111   111     1347899999999999996


Q ss_pred             CC--CCCCCeeEecccc
Q 023205          265 DP--VFPPGIVDVHGIL  279 (286)
Q Consensus       265 ~~--~~~~~~~~l~~~~  279 (286)
                      .+  ...|+++++.|+.
T Consensus       235 ~~~~~~~G~~~~v~gG~  251 (254)
T 2wsb_A          235 PAASYVTGAILAVDGGY  251 (254)
T ss_dssp             GGGTTCCSCEEEESTTG
T ss_pred             cccccccCCEEEECCCE
Confidence            53  3458899998874

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=99.91  E-value=8.6e-23  Score=169.76  Aligned_cols=208  Identities=12%  Similarity=0.084  Sum_probs=146.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCC-Ccccc--cccCCceeEEeccCCCHhHHHHHhc-------CCCEE
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSG-RSSLR--DSWANNVIWHQGNLLSSDSWKEALD-------GVTAV  125 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~-~~~~~--~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d~v  125 (286)
                      .++|+||||+|+||++++++|+++|++|++++|+. ++...  .....++.++.+|++|+++++++++       ++|+|
T Consensus         7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l   86 (249)
T 2ew8_A            7 DKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCDIL   86 (249)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHcCCCCEE
Confidence            57899999999999999999999999999999987 33211  1123578899999999998887753       78999


Q ss_pred             EEccccCCC----------cchhhhhhhHHHHHHHHH----HHHcCCCEEEEEecCCcCCCCccccchHHHHHHHHHHHH
Q 023205          126 ISCVGGFGS----------NSYMYKINGTANINAIRA----ASEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELL  191 (286)
Q Consensus       126 i~~a~~~~~----------~~~~~~~~~~~~~~l~~~----a~~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~  191 (286)
                      |||||....          ....+++|+.++.++.++    +++.+..+||++||............|+.+|...+.+.+
T Consensus        87 v~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~  166 (249)
T 2ew8_A           87 VNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKAANIGFTR  166 (249)
T ss_dssp             EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCSSCHHHHHHHHHHHHHHH
T ss_pred             EECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCCCchhHHHHHHHHHHHHH
Confidence            999986532          124678999998888777    445667799999995332333456789999999998775


Q ss_pred             H------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcC
Q 023205          192 T------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATD  265 (286)
Q Consensus       192 ~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~  265 (286)
                      .      ..|+++++++||.+.++.......      ....+ .   ..... .|.     ..+.+++|+|++++.++..
T Consensus       167 ~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~------~~~~~-~---~~~~~-~~~-----~~~~~p~dva~~~~~l~s~  230 (249)
T 2ew8_A          167 ALASDLGKDGITVNAIAPSLVRTATTEASAL------SAMFD-V---LPNML-QAI-----PRLQVPLDLTGAAAFLASD  230 (249)
T ss_dssp             HHHHHHGGGTEEEEEEEECCC----------------------------CTT-SSS-----CSCCCTHHHHHHHHHHTSG
T ss_pred             HHHHHHHhcCcEEEEEecCcCcCccchhccc------cchhh-H---HHHhh-Ccc-----CCCCCHHHHHHHHHHHcCc
Confidence            3      368999999999998764320100      00000 0   00000 121     2478999999999999975


Q ss_pred             C--CCCCCeeEecccc
Q 023205          266 P--VFPPGIVDVHGIL  279 (286)
Q Consensus       266 ~--~~~~~~~~l~~~~  279 (286)
                      +  ...|+.+++.|+.
T Consensus       231 ~~~~~tG~~~~vdGG~  246 (249)
T 2ew8_A          231 DASFITGQTLAVDGGM  246 (249)
T ss_dssp             GGTTCCSCEEEESSSC
T ss_pred             ccCCCCCcEEEECCCc
Confidence            3  3468899998874

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=99.91  E-value=3.1e-23  Score=175.06  Aligned_cols=216  Identities=12%  Similarity=0.057  Sum_probs=154.8

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc--cccCCceeEEeccCCCHhHHHHHhc-------CCCEE
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSWANNVIWHQGNLLSSDSWKEALD-------GVTAV  125 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~--~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d~v  125 (286)
                      ..++++||||+|+||++++++|+++|++|++++|+.+....  .....++.++.+|++|+++++++++       ++|++
T Consensus        26 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l  105 (277)
T 4dqx_A           26 NQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSKAFGVRVDVSSAKDAESMVEKTTAKWGRVDVL  105 (277)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            35789999999999999999999999999999998654211  1224578999999999999888775       68999


Q ss_pred             EEccccCCC----------cchhhhhhhHHHHHHHHHHHH----cCCCEEEEEecCCcCCCCccccchHHHHHHHHHHHH
Q 023205          126 ISCVGGFGS----------NSYMYKINGTANINAIRAASE----KGVKRFVYISAADFGVANYLLQGYYEGKRAAETELL  191 (286)
Q Consensus       126 i~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~~----~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~  191 (286)
                      |||||....          ....+++|+.++.++++++..    .+..+||++||............|+.+|...+.+.+
T Consensus       106 v~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~  185 (277)
T 4dqx_A          106 VNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATSAIADRTAYVASKGAISSLTR  185 (277)
T ss_dssp             EECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHH
T ss_pred             EECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhhCcCCCCChhHHHHHHHHHHHHH
Confidence            999996421          134567999999988888743    345599999996433344456789999999998765


Q ss_pred             H------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcC
Q 023205          192 T------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATD  265 (286)
Q Consensus       192 ~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~  265 (286)
                      .      ..|+++++++||.+..+........    ............   ...|     ...+.+++|+|++++.++..
T Consensus       186 ~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~----~~~~~~~~~~~~---~~~~-----~~r~~~pedvA~~v~~L~s~  253 (277)
T 4dqx_A          186 AMAMDHAKEGIRVNAVAPGTIDSPYFTKIFAE----AKDPAKLRSDFN---ARAV-----MDRMGTAEEIAEAMLFLASD  253 (277)
T ss_dssp             HHHHHHGGGTEEEEEEEECSBCCHHHHHHHHT----CSCHHHHHHHHH---TTST-----TCSCBCHHHHHHHHHHHHSG
T ss_pred             HHHHHhhhcCeEEEEEeeCcCcCchhhhhccc----ccchhHHHHHHH---hcCc-----ccCCcCHHHHHHHHHHHhCC
Confidence            3      4689999999999976531100000    001111110011   1111     23467999999999999975


Q ss_pred             CC--CCCCeeEeccccccc
Q 023205          266 PV--FPPGIVDVHGILRYS  282 (286)
Q Consensus       266 ~~--~~~~~~~l~~~~~~s  282 (286)
                      ..  ..|+++++.|+..++
T Consensus       254 ~~~~itG~~i~vdGG~~~~  272 (277)
T 4dqx_A          254 RSRFATGSILTVDGGSSIG  272 (277)
T ss_dssp             GGTTCCSCEEEESSSSSSC
T ss_pred             ccCCCcCCEEEECCchhhh
Confidence            43  468999999987654

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=99.91  E-value=4.2e-23  Score=173.01  Aligned_cols=207  Identities=17%  Similarity=0.164  Sum_probs=150.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc------cccCCceeEEeccCCCHhHHHHHhc-------CC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD-------GV  122 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~------~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~  122 (286)
                      .++|+||||+|+||++++++|+++|++|++++|+..+...      .....++.++.+|++|.++++++++       .+
T Consensus        14 ~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   93 (265)
T 1h5q_A           14 NKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGPI   93 (265)
T ss_dssp             TEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSCSE
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence            5689999999999999999999999999999997654211      1113578999999999998887765       38


Q ss_pred             CEEEEccccCCCc----------chhhhhhhHHHHHHHHHHHHc----C-CCEEEEEecCC-c-CCCC-----ccccchH
Q 023205          123 TAVISCVGGFGSN----------SYMYKINGTANINAIRAASEK----G-VKRFVYISAAD-F-GVAN-----YLLQGYY  180 (286)
Q Consensus       123 d~vi~~a~~~~~~----------~~~~~~~~~~~~~l~~~a~~~----~-v~~~v~~Ss~~-~-~~~~-----~~~~~y~  180 (286)
                      |+||||||.....          ...+++|+.++.++++++...    + .++||++||.. + +...     .+...|+
T Consensus        94 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~Y~  173 (265)
T 1h5q_A           94 SGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYN  173 (265)
T ss_dssp             EEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEETTEECSCHHHH
T ss_pred             CEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhccccccccccccccccH
Confidence            9999999875321          245789999999998887543    3 36899999952 2 1111     1256899


Q ss_pred             HHHHHHHHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHH
Q 023205          181 EGKRAAETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTV  254 (286)
Q Consensus       181 ~sK~~~E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D  254 (286)
                      .+|...|.+++.      ..|++++++|||.+.++......       ......+..      ..|.     ..+++++|
T Consensus       174 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~-------~~~~~~~~~------~~~~-----~~~~~~~d  235 (265)
T 1h5q_A          174 SSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMD-------KKIRDHQAS------NIPL-----NRFAQPEE  235 (265)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSC-------HHHHHHHHH------TCTT-----SSCBCGGG
T ss_pred             HHHHHHHHHHHHHHHHHHhcCcEEEEEecCccccccccccc-------hhHHHHHHh------cCcc-----cCCCCHHH
Confidence            999999987753      35899999999999876432110       011111111      1121     24689999


Q ss_pred             HHHHHHHHhcCCC--CCCCeeEeccccc
Q 023205          255 VAKVAVRAATDPV--FPPGIVDVHGILR  280 (286)
Q Consensus       255 va~~~~~~l~~~~--~~~~~~~l~~~~~  280 (286)
                      +|++++.++..+.  ..|+.|++.|+..
T Consensus       236 va~~~~~l~~~~~~~~~G~~~~v~gG~~  263 (265)
T 1h5q_A          236 MTGQAILLLSDHATYMTGGEYFIDGGQL  263 (265)
T ss_dssp             GHHHHHHHHSGGGTTCCSCEEEECTTGG
T ss_pred             HHHHHHhhccCchhcCcCcEEEecCCEe
Confidence            9999999997643  4689999998864

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=99.91  E-value=2.1e-23  Score=171.75  Aligned_cols=184  Identities=15%  Similarity=0.065  Sum_probs=131.4

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCccccc-ccCCceeEEeccCCCHhHHHHHhc-------CCCEEE
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRD-SWANNVIWHQGNLLSSDSWKEALD-------GVTAVI  126 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~-~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d~vi  126 (286)
                      ++++|+||||+|+||++++++|+++|++|++++|+.++.... ....++.++.+|++|.++++++++       ++|+||
T Consensus         4 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li   83 (234)
T 2ehd_A            4 MKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELEGALPLPGDVREEGDWARAVAAMEEAFGELSALV   83 (234)
T ss_dssp             CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhhceEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            357899999999999999999999999999999986432110 011278899999999998887765       689999


Q ss_pred             EccccCCC----------cchhhhhhhHHHHHHHHH----HHHcCCCEEEEEecCCcCCCCccccchHHHHHHHHHHHHH
Q 023205          127 SCVGGFGS----------NSYMYKINGTANINAIRA----ASEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLT  192 (286)
Q Consensus       127 ~~a~~~~~----------~~~~~~~~~~~~~~l~~~----a~~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~~  192 (286)
                      ||||....          ....+++|+.++.++++.    +++.+.++||++||........+...|+.+|...|.+.+.
T Consensus        84 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~  163 (234)
T 2ehd_A           84 NNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGKNPFKGGAAYNASKFGLLGLAGA  163 (234)
T ss_dssp             ECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHH
T ss_pred             ECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEECCchhcCCCCCCchhhHHHHHHHHHHHH
Confidence            99986431          134668899998755554    4556678999999964333334567899999998886642


Q ss_pred             ------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcCC
Q 023205          193 ------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDP  266 (286)
Q Consensus       193 ------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~  266 (286)
                            ..|++++++|||.+..+.....                   .  ..        ..+++++|+|++++.++..+
T Consensus       164 la~e~~~~gi~v~~v~Pg~v~t~~~~~~-------------------~--~~--------~~~~~~~dvA~~~~~l~~~~  214 (234)
T 2ehd_A          164 AMLDLREANVRVVNVLPGSVDTGFAGNT-------------------P--GQ--------AWKLKPEDVAQAVLFALEMP  214 (234)
T ss_dssp             HHHHHGGGTEEEEEEECC---------------------------------------------CCHHHHHHHHHHHHHSC
T ss_pred             HHHHHhhcCcEEEEEEeCCCcCCccccc-------------------c--cc--------cCCCCHHHHHHHHHHHhCCC
Confidence                  4689999999999875432100                   0  00        01579999999999999765


Q ss_pred             C
Q 023205          267 V  267 (286)
Q Consensus       267 ~  267 (286)
                      .
T Consensus       215 ~  215 (234)
T 2ehd_A          215 G  215 (234)
T ss_dssp             C
T ss_pred             c
Confidence            4

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=99.91  E-value=2.3e-23  Score=174.81  Aligned_cols=210  Identities=19%  Similarity=0.131  Sum_probs=149.2

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc--cccCCceeEEeccCCCHhHHHHHhc-------CCC
Q 023205           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSWANNVIWHQGNLLSSDSWKEALD-------GVT  123 (286)
Q Consensus        53 ~~~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~--~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d  123 (286)
                      ....++|+||||+|+||++++++|+++|++|++++|+.++...  .....++.++.+|++|+++++++++       ++|
T Consensus        24 ~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD  103 (266)
T 3grp_A           24 KLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGKDVFVFSANLSDRKSIKQLAEVAEREMEGID  103 (266)
T ss_dssp             CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHHHHHHHTSCC
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEeecCCHHHHHHHHHHHHHHcCCCC
Confidence            3456799999999999999999999999999999998654211  1224578999999999998888775       689


Q ss_pred             EEEEccccCCC----------cchhhhhhhHHHHHHHHHH----HHcCCCEEEEEecCCcCCCCccccchHHHHHHHHHH
Q 023205          124 AVISCVGGFGS----------NSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETE  189 (286)
Q Consensus       124 ~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a----~~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~  189 (286)
                      +||||||....          +...+++|+.++.++.+++    ++.+..+||++||............|+.+|...+.+
T Consensus       104 ~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~~  183 (266)
T 3grp_A          104 ILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVVGNPGQTNYCAAKAGLIGF  183 (266)
T ss_dssp             EEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCC-------CHHHHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEECCHHHcCCCCCchhHHHHHHHHHHH
Confidence            99999997531          2356789999977776665    345667999999953323334567899999998886


Q ss_pred             HHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHh
Q 023205          190 LLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAA  263 (286)
Q Consensus       190 ~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l  263 (286)
                      .+.      ..|+++++++||.+.++.....        .   +.......  ...|     ...+.+++|+|++++.++
T Consensus       184 ~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~--------~---~~~~~~~~--~~~p-----~~r~~~~edvA~~v~~L~  245 (266)
T 3grp_A          184 SKALAQEIASRNITVNCIAPGFIKSAMTDKL--------N---EKQKEAIM--AMIP-----MKRMGIGEEIAFATVYLA  245 (266)
T ss_dssp             HHHHHHHHGGGTEEEEEEEECSBCSHHHHTC--------C---HHHHHHHH--TTCT-----TCSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHhhhhCcEEEEEeeCcCCCchhhcc--------C---HHHHHHHH--hcCC-----CCCCcCHHHHHHHHHHHh
Confidence            653      4689999999999976532110        0   11111111  1122     234678999999999998


Q ss_pred             cCCC--CCCCeeEeccccc
Q 023205          264 TDPV--FPPGIVDVHGILR  280 (286)
Q Consensus       264 ~~~~--~~~~~~~l~~~~~  280 (286)
                      ..+.  ..|+++++.|+..
T Consensus       246 s~~~~~itG~~i~vdGG~~  264 (266)
T 3grp_A          246 SDEAAYLTGQTLHINGGMA  264 (266)
T ss_dssp             SGGGTTCCSCEEEESTTC-
T ss_pred             CccccCccCCEEEECCCee
Confidence            7543  4689999988753

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=99.91  E-value=4.3e-23  Score=170.91  Aligned_cols=199  Identities=13%  Similarity=0.012  Sum_probs=148.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC-------eEEEEecCCCcccc---c--ccCCceeEEeccCCCHhHHHHHhc---
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGL-------TVASLSRSGRSSLR---D--SWANNVIWHQGNLLSSDSWKEALD---  120 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~-------~V~~l~R~~~~~~~---~--~~~~~~~~i~~Dl~d~~~~~~~~~---  120 (286)
                      .++|+||||+|+||++++++|+++|+       +|++++|+.++...   +  ....++.++.+|++|+++++++++   
T Consensus         2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   81 (244)
T 2bd0_A            2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIV   81 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHHH
Confidence            46899999999999999999999999       99999998543211   0  113468899999999998888775   


Q ss_pred             ----CCCEEEEccccCCC----------cchhhhhhhHHHHHHHHHHH----HcCCCEEEEEecCCcCCCCccccchHHH
Q 023205          121 ----GVTAVISCVGGFGS----------NSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEG  182 (286)
Q Consensus       121 ----~~d~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~----~~~v~~~v~~Ss~~~~~~~~~~~~y~~s  182 (286)
                          ++|+||||||....          ....+++|+.++.++++++.    +.+.++||++||........+...|+.+
T Consensus        82 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  161 (244)
T 2bd0_A           82 ERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCMS  161 (244)
T ss_dssp             HHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             HhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEEecchhcCCCCCCchhHHH
Confidence                68999999996532          13456899999999888874    3466799999995433334456789999


Q ss_pred             HHHHHHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHH
Q 023205          183 KRAAETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVA  256 (286)
Q Consensus       183 K~~~E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva  256 (286)
                      |...|.+.+.      ..|++++++|||.++++.....        ..                   .....+++++|+|
T Consensus       162 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~--------~~-------------------~~~~~~~~~~dva  214 (244)
T 2bd0_A          162 KFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKV--------DD-------------------EMQALMMMPEDIA  214 (244)
T ss_dssp             HHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCC--------CS-------------------TTGGGSBCHHHHH
T ss_pred             HHHHHHHHHHHHHHhhccCcEEEEEECCCccchhhhhc--------cc-------------------cccccCCCHHHHH
Confidence            9999987642      4689999999999998754211        00                   0012478999999


Q ss_pred             HHHHHHhcCCCC--CCCeeEecccccc
Q 023205          257 KVAVRAATDPVF--PPGIVDVHGILRY  281 (286)
Q Consensus       257 ~~~~~~l~~~~~--~~~~~~l~~~~~~  281 (286)
                      ++++.++..+..  .++++...+++.+
T Consensus       215 ~~~~~l~~~~~~~~~g~~~~~~~~~~~  241 (244)
T 2bd0_A          215 APVVQAYLQPSRTVVEEIILRPTSGDI  241 (244)
T ss_dssp             HHHHHHHTSCTTEEEEEEEEEETTCCC
T ss_pred             HHHHHHHhCCccccchheEEecccccc
Confidence            999999986542  3445555554443

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=99.90  E-value=4.2e-23  Score=174.49  Aligned_cols=219  Identities=16%  Similarity=0.132  Sum_probs=152.8

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc-----cccCCceeEEeccCCCHhHHHHHhc-------CC
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------GV  122 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~-----~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~  122 (286)
                      .++++|||||+|+||++++++|+++|++|++++|+.++...     .....++.++.+|++|+++++++++       .+
T Consensus        23 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  102 (279)
T 3sju_A           23 RPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFGPI  102 (279)
T ss_dssp             --CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHCSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            35789999999999999999999999999999998654211     1124578999999999998887765       68


Q ss_pred             CEEEEccccCCC----------cchhhhhhhHHHHHHHHHHHH------cCCCEEEEEecCCcCCCCccccchHHHHHHH
Q 023205          123 TAVISCVGGFGS----------NSYMYKINGTANINAIRAASE------KGVKRFVYISAADFGVANYLLQGYYEGKRAA  186 (286)
Q Consensus       123 d~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~~------~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~  186 (286)
                      |+||||||....          ....+++|+.++.++++++..      .+..+||++||............|+.+|...
T Consensus       103 d~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~asKaa~  182 (279)
T 3sju_A          103 GILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQGVMYAAPYTASKHGV  182 (279)
T ss_dssp             CEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHHH
T ss_pred             cEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChhhccCCCCChhHHHHHHHH
Confidence            999999997532          134567999999999888754      4556999999964333344567899999999


Q ss_pred             HHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHH
Q 023205          187 ETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAV  260 (286)
Q Consensus       187 E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~  260 (286)
                      +.+.+.      ..|+++++++||.+.++.............+...+.......  ...|     ...+.+++|+|++++
T Consensus       183 ~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~p-----~~r~~~pedvA~~v~  255 (279)
T 3sju_A          183 VGFTKSVGFELAKTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFN--AKIP-----LGRYSTPEEVAGLVG  255 (279)
T ss_dssp             HHHHHHHHHHTGGGTEEEEEEEESSBCSHHHHHHHHSCCSSSCCCHHHHHHHHH--TTCT-----TSSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhhCcEEEEEeeCcccchHHHHHHhhhhhcccCChHHHHHHHH--hcCC-----CCCCCCHHHHHHHHH
Confidence            987653      468999999999997653211000000000000011111111  1112     234689999999999


Q ss_pred             HHhcCCC--CCCCeeEeccccc
Q 023205          261 RAATDPV--FPPGIVDVHGILR  280 (286)
Q Consensus       261 ~~l~~~~--~~~~~~~l~~~~~  280 (286)
                      .++....  ..|+++++.|+..
T Consensus       256 ~L~s~~a~~itG~~i~vdGG~~  277 (279)
T 3sju_A          256 YLVTDAAASITAQALNVCGGLG  277 (279)
T ss_dssp             HHTSSGGGGCCSCEEEESTTCC
T ss_pred             HHhCccccCcCCcEEEECCCcc
Confidence            9987643  5689999988753

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=99.90  E-value=4.4e-23  Score=175.41  Aligned_cols=207  Identities=16%  Similarity=0.084  Sum_probs=151.5

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc--cccCCceeEEeccCCCHhHHHHHhc---CCCEEEEc
Q 023205           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSWANNVIWHQGNLLSSDSWKEALD---GVTAVISC  128 (286)
Q Consensus        54 ~~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~--~~~~~~~~~i~~Dl~d~~~~~~~~~---~~d~vi~~  128 (286)
                      ...++|+||||+|+||++++++|+++|++|++++|+.++...  .....++.++.+|++|.++++++++   ++|+||||
T Consensus        14 l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~iD~lv~n   93 (291)
T 3rd5_A           14 FAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAGQVEVRELDLQDLSSVRRFADGVSGADVLINN   93 (291)
T ss_dssp             CTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTSSSEEEEEECCTTCHHHHHHHHHTCCCEEEEEEC
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCeeEEEcCCCCHHHHHHHHHhcCCCCEEEEC
Confidence            446899999999999999999999999999999998654221  2224579999999999999999887   56999999


Q ss_pred             cccCC--------CcchhhhhhhHHHHHHHHHHHHcCCCEEEEEecCC-c-CC-----------CCccccchHHHHHHHH
Q 023205          129 VGGFG--------SNSYMYKINGTANINAIRAASEKGVKRFVYISAAD-F-GV-----------ANYLLQGYYEGKRAAE  187 (286)
Q Consensus       129 a~~~~--------~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~~-~-~~-----------~~~~~~~y~~sK~~~E  187 (286)
                      ||...        .....+++|+.++.++++++.....++||++||.. + +.           ...+...|+.+|...+
T Consensus        94 Ag~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~riv~isS~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~  173 (291)
T 3rd5_A           94 AGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPRLTDRVVTVSSMAHWPGRINLEDLNWRSRRYSPWLAYSQSKLANL  173 (291)
T ss_dssp             CCCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEEEEEEECCGGGTTCCCCSSCTTCSSSCCCHHHHHHHHHHHHH
T ss_pred             CcCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeEeechhhccCCCCcccccccccCCCCcchHHHHHHHHH
Confidence            99653        23467899999999999999888778999999942 2 11           1123467999999999


Q ss_pred             HHHHH------hCC--CcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHH
Q 023205          188 TELLT------RYP--YGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVA  259 (286)
Q Consensus       188 ~~~~~------~~g--~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~  259 (286)
                      .+.+.      ..|  +++++++||.+..+......           +.+....   ...+    ...-..+.+|+|+++
T Consensus       174 ~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~~~-----------~~~~~~~---~~~~----~~~~~~~~~~~A~~~  235 (291)
T 3rd5_A          174 LFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGASG-----------RKLGDAL---MSAA----TRVVATDADFGARQT  235 (291)
T ss_dssp             HHHHHHHHHHHHTTCCCEEEEECCSGGGSCC--------------------------------------CHHHHHHHHHH
T ss_pred             HHHHHHHHHHhhCCCCEEEEEeeCCCCccccccccc-----------hHHHHHH---HHHH----HHHHhCCHHHHHHHH
Confidence            87653      345  99999999999765432110           0000000   0011    111235699999999


Q ss_pred             HHHhcCCCCCCCeeEeccc
Q 023205          260 VRAATDPVFPPGIVDVHGI  278 (286)
Q Consensus       260 ~~~l~~~~~~~~~~~l~~~  278 (286)
                      +.++..+...|+.+.+.|+
T Consensus       236 ~~l~~~~~~~G~~~~vdgG  254 (291)
T 3rd5_A          236 LYAASQDLPGDSFVGPRFG  254 (291)
T ss_dssp             HHHHHSCCCTTCEEEETTS
T ss_pred             HHHHcCCCCCCceeCCccc
Confidence            9999987777889988764

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=99.90  E-value=4.7e-23  Score=173.25  Aligned_cols=207  Identities=17%  Similarity=0.121  Sum_probs=153.1

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc------cccCCceeEEeccCCCHhHHHHHhc-------C
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD-------G  121 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~------~~~~~~~~~i~~Dl~d~~~~~~~~~-------~  121 (286)
                      ..++++||||+|+||++++++|+++|++|+++.|+......      .....++.++.+|++|+++++++++       +
T Consensus        27 ~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~  106 (269)
T 4dmm_A           27 TDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIERWGR  106 (269)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            45789999999999999999999999999999986433211      1123578999999999999888775       6


Q ss_pred             CCEEEEccccCCC----------cchhhhhhhHHHHHHHHHHH----HcCCCEEEEEecCCcCCCCccccchHHHHHHHH
Q 023205          122 VTAVISCVGGFGS----------NSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEGKRAAE  187 (286)
Q Consensus       122 ~d~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~----~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E  187 (286)
                      +|++|||||....          ....+++|+.++.++++++.    +.+..+||++||............|+.+|...+
T Consensus       107 id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~  186 (269)
T 4dmm_A          107 LDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEMGNPGQANYSAAKAGVI  186 (269)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCHHHHHCCTTCHHHHHHHHHHH
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCCCchhHHHHHHHHH
Confidence            8999999997532          13567899999999888873    345679999999532222334568999999988


Q ss_pred             HHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHH
Q 023205          188 TELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVR  261 (286)
Q Consensus       188 ~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~  261 (286)
                      .+.+.      ..|+++++++||.+.++.....           ..   ....  ...|.     ..+.+++|+|++++.
T Consensus       187 ~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~-----------~~---~~~~--~~~p~-----~r~~~~~dvA~~v~~  245 (269)
T 4dmm_A          187 GLTKTVAKELASRGITVNAVAPGFIATDMTSEL-----------AA---EKLL--EVIPL-----GRYGEAAEVAGVVRF  245 (269)
T ss_dssp             HHHHHHHHHHGGGTCEEEEEEECCBTTSCSCHH-----------HH---HHHG--GGCTT-----SSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHhhhCcEEEEEEECCCcCcccccc-----------cH---HHHH--hcCCC-----CCCCCHHHHHHHHHH
Confidence            86653      4689999999999987643210           01   1111  11222     346889999999999


Q ss_pred             HhcCC---CCCCCeeEeccccccc
Q 023205          262 AATDP---VFPPGIVDVHGILRYS  282 (286)
Q Consensus       262 ~l~~~---~~~~~~~~l~~~~~~s  282 (286)
                      ++.++   ...|+++++.|+..++
T Consensus       246 l~s~~~~~~itG~~i~vdGG~~~s  269 (269)
T 4dmm_A          246 LAADPAAAYITGQVINIDGGLVMA  269 (269)
T ss_dssp             HHHCGGGGGCCSCEEEESTTSCCC
T ss_pred             HhCCcccCCCcCCEEEECCCeecC
Confidence            99874   2458999999986543

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=99.90  E-value=6e-23  Score=175.52  Aligned_cols=213  Identities=17%  Similarity=0.087  Sum_probs=153.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc---c-------ccCCceeEEeccCCCHhHHHHHhc-----
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR---D-------SWANNVIWHQGNLLSSDSWKEALD-----  120 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~---~-------~~~~~~~~i~~Dl~d~~~~~~~~~-----  120 (286)
                      .++|+||||+|+||++++++|+++|++|++++|+.++...   +       ....++.++.+|++|+++++++++     
T Consensus        18 ~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   97 (303)
T 1yxm_A           18 GQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLDT   97 (303)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHHHHH
Confidence            5789999999999999999999999999999998643211   0       123578999999999999888776     


Q ss_pred             --CCCEEEEccccCCC----------cchhhhhhhHHHHHHHHHHHH----cCCCEEEEEecCCcCCCCccccchHHHHH
Q 023205          121 --GVTAVISCVGGFGS----------NSYMYKINGTANINAIRAASE----KGVKRFVYISAADFGVANYLLQGYYEGKR  184 (286)
Q Consensus       121 --~~d~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~~----~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~  184 (286)
                        ++|+||||||....          ....+++|+.++.++++++..    .+..+||++||.. .........|+.+|.
T Consensus        98 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~-~~~~~~~~~Y~~sK~  176 (303)
T 1yxm_A           98 FGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPT-KAGFPLAVHSGAARA  176 (303)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCC-TTCCTTCHHHHHHHH
T ss_pred             cCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEeec-ccCCCcchhhHHHHH
Confidence              48999999995421          134578999999999998765    2346899999965 222334567999999


Q ss_pred             HHHHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHH
Q 023205          185 AAETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKV  258 (286)
Q Consensus       185 ~~E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~  258 (286)
                      ..+.+.+.      ..|++++++|||.++++.......   ......    ....  ....|     ...+.+++|+|++
T Consensus       177 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~---~~~~~~----~~~~--~~~~p-----~~~~~~~~dvA~~  242 (303)
T 1yxm_A          177 GVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYG---SWGQSF----FEGS--FQKIP-----AKRIGVPEEVSSV  242 (303)
T ss_dssp             HHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSG---GGGGGG----GTTG--GGGST-----TSSCBCTHHHHHH
T ss_pred             HHHHHHHHHHHHhcccCeEEEEEecCCcccchhhhhcc---ccchHH----HHHH--HhcCc-----ccCCCCHHHHHHH
Confidence            99886652      358999999999999884211100   000000    0000  01112     1247899999999


Q ss_pred             HHHHhcCCC--CCCCeeEecccccccc
Q 023205          259 AVRAATDPV--FPPGIVDVHGILRYSQ  283 (286)
Q Consensus       259 ~~~~l~~~~--~~~~~~~l~~~~~~s~  283 (286)
                      ++.++..+.  ..|+.+++.|+..++.
T Consensus       243 i~~l~~~~~~~~~G~~~~v~gG~~~~~  269 (303)
T 1yxm_A          243 VCFLLSPAASFITGQSVDVDGGRSLYT  269 (303)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTGGGCB
T ss_pred             HHHHhCcccccCCCcEEEECCCeeccc
Confidence            999997533  4689999999876553

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.90  E-value=8.1e-23  Score=169.60  Aligned_cols=194  Identities=12%  Similarity=0.027  Sum_probs=140.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCC--CeEEEEecCCCcccc--cccCCceeEEeccCCCHhHHHHHhc---------CC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRG--LTVASLSRSGRSSLR--DSWANNVIWHQGNLLSSDSWKEALD---------GV  122 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g--~~V~~l~R~~~~~~~--~~~~~~~~~i~~Dl~d~~~~~~~~~---------~~  122 (286)
                      +++|+||||+|+||++++++|+++|  ++|++++|+.++...  +....++.++.+|++|+++++++++         ++
T Consensus         3 ~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~~i   82 (250)
T 1yo6_A            3 PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDGL   82 (250)
T ss_dssp             CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGCC
T ss_pred             CCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHhccCCceEEEEeecCCHHHHHHHHHHHHHhcCCCCC
Confidence            5789999999999999999999999  999999998654211  1113578999999999999888876         79


Q ss_pred             CEEEEccccCC-C----------cchhhhhhhHHHHHHHHHHHHc----------C-----CCEEEEEecCC-cCCC-C-
Q 023205          123 TAVISCVGGFG-S----------NSYMYKINGTANINAIRAASEK----------G-----VKRFVYISAAD-FGVA-N-  173 (286)
Q Consensus       123 d~vi~~a~~~~-~----------~~~~~~~~~~~~~~l~~~a~~~----------~-----v~~~v~~Ss~~-~~~~-~-  173 (286)
                      |+||||||... .          ....+++|+.++.++++++...          +     ..+||++||.. +... . 
T Consensus        83 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~  162 (250)
T 1yo6_A           83 SLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTS  162 (250)
T ss_dssp             CEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTTCCS
T ss_pred             cEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCccccCCccc
Confidence            99999998654 1          1245689999999888876542          4     67999999952 2111 1 


Q ss_pred             ----ccccchHHHHHHHHHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCC
Q 023205          174 ----YLLQGYYEGKRAAETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVG  243 (286)
Q Consensus       174 ----~~~~~y~~sK~~~E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  243 (286)
                          .+...|+.+|...|.+++.      ..|+++++++||.+.++....                              
T Consensus       163 ~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~------------------------------  212 (250)
T 1yo6_A          163 GSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGK------------------------------  212 (250)
T ss_dssp             TTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC-------------------------------------
T ss_pred             ccccCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCCCCC------------------------------
Confidence                3567899999999987753      348999999999987653210                              


Q ss_pred             CccCCCccHHHHHHHHHHHhcCCC--CCCCeeEecccccccc
Q 023205          244 PLFTPPVNVTVVAKVAVRAATDPV--FPPGIVDVHGILRYSQ  283 (286)
Q Consensus       244 ~~~~~~i~v~Dva~~~~~~l~~~~--~~~~~~~l~~~~~~s~  283 (286)
                         ..+++.+|+|++++.++..+.  ..|+.+.+.| ..+.|
T Consensus       213 ---~~~~~~~~~a~~~~~~~~~~~~~~~G~~~~~~g-~~~~~  250 (250)
T 1yo6_A          213 ---NAALTVEQSTAELISSFNKLDNSHNGRFFMRNL-KPYEF  250 (250)
T ss_dssp             ---------HHHHHHHHHHHTTCCGGGTTCEEETTE-EECCC
T ss_pred             ---CCCCCHHHHHHHHHHHHhcccccCCCeEEEECC-cCCCC
Confidence               135789999999999998765  3455665554 33444

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=99.90  E-value=2.6e-23  Score=172.21  Aligned_cols=205  Identities=18%  Similarity=0.144  Sum_probs=148.1

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCeEEEE-ecCCCcccc-----cccCCceeEEeccCCCHhHHHHHhc-------CCC
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGLTVASL-SRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------GVT  123 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l-~R~~~~~~~-----~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d  123 (286)
                      ++|+||||+|+||++++++|+++|++|+++ .|+.+....     .....++.++.+|++|+++++++++       ++|
T Consensus         2 k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   81 (244)
T 1edo_A            2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTID   81 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCS
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence            689999999999999999999999999995 676433111     1113478899999999999988876       689


Q ss_pred             EEEEccccCCC----------cchhhhhhhHHHHHHHHHHHH----cCCCEEEEEecCCcCCCCccccchHHHHHHHHHH
Q 023205          124 AVISCVGGFGS----------NSYMYKINGTANINAIRAASE----KGVKRFVYISAADFGVANYLLQGYYEGKRAAETE  189 (286)
Q Consensus       124 ~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~~----~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~  189 (286)
                      +||||||....          ....+++|+.++.++++++.+    .+..+||++||........+...|+.+|...|.+
T Consensus        82 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~  161 (244)
T 1edo_A           82 VVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGF  161 (244)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHHHHHH
T ss_pred             EEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhcCCCCCCccchhhHHHHHHH
Confidence            99999986532          124678999999998888765    4667999999953212233457899999998886


Q ss_pred             HHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHh
Q 023205          190 LLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAA  263 (286)
Q Consensus       190 ~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l  263 (286)
                      .+.      ..|++++++|||.++++.....           ...+.....  ...|.     ..+++++|+|++++.++
T Consensus       162 ~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-----------~~~~~~~~~--~~~~~-----~~~~~~~dva~~~~~l~  223 (244)
T 1edo_A          162 SKTAAREGASRNINVNVVCPGFIASDMTAKL-----------GEDMEKKIL--GTIPL-----GRTGQPENVAGLVEFLA  223 (244)
T ss_dssp             HHHHHHHHHTTTEEEEEEEECSBCSHHHHTT-----------CHHHHHHHH--TSCTT-----CSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHhhhcCCEEEEEeeCccccchhhhc-----------ChHHHHHHh--hcCCC-----CCCCCHHHHHHHHHHHh
Confidence            653      3689999999999987642110           011111111  11222     24789999999999998


Q ss_pred             cCC---CCCCCeeEecccc
Q 023205          264 TDP---VFPPGIVDVHGIL  279 (286)
Q Consensus       264 ~~~---~~~~~~~~l~~~~  279 (286)
                      ..+   ...|+.|++.|+.
T Consensus       224 ~~~~~~~~~G~~~~v~gG~  242 (244)
T 1edo_A          224 LSPAASYITGQAFTIDGGI  242 (244)
T ss_dssp             HCSGGGGCCSCEEEESTTT
T ss_pred             CCCccCCcCCCEEEeCCCc
Confidence            443   2458899998874

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=99.90  E-value=1.7e-23  Score=173.41  Aligned_cols=206  Identities=17%  Similarity=0.131  Sum_probs=145.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEE-ecCCCcccc-----cccCCceeE-EeccCCCHhHHHHHhc-------C
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASL-SRSGRSSLR-----DSWANNVIW-HQGNLLSSDSWKEALD-------G  121 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l-~R~~~~~~~-----~~~~~~~~~-i~~Dl~d~~~~~~~~~-------~  121 (286)
                      +++|+||||+|+||++++++|+++|++|+++ .|+.++...     .....++.+ +.+|++|.++++++++       +
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLGG   80 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHHTC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhcCC
Confidence            3689999999999999999999999999998 676443211     011235666 9999999998887754       7


Q ss_pred             CCEEEEccccCCC----------cchhhhhhhHHHHHHHH----HHHHcCCCEEEEEecCCcCCCCccccchHHHHHHHH
Q 023205          122 VTAVISCVGGFGS----------NSYMYKINGTANINAIR----AASEKGVKRFVYISAADFGVANYLLQGYYEGKRAAE  187 (286)
Q Consensus       122 ~d~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~----~a~~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E  187 (286)
                      +|+||||||....          ....+++|+.++.++++    .+++.+.++||++||...-....+...|+.+|...|
T Consensus        81 ~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~  160 (245)
T 2ph3_A           81 LDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFGRIVNITSVVGILGNPGQANYVASKAGLI  160 (245)
T ss_dssp             CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCSSBHHHHHHHHHHH
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCEEEEEeChhhccCCCCCcchHHHHHHHH
Confidence            9999999986532          13457899999665554    445567789999999521112234568999999988


Q ss_pred             HHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHH
Q 023205          188 TELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVR  261 (286)
Q Consensus       188 ~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~  261 (286)
                      .+.+.      ..|++++++|||.++++.....   +    ......+..      ..|     ...+++++|+|++++.
T Consensus       161 ~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~---~----~~~~~~~~~------~~~-----~~~~~~~~dva~~~~~  222 (245)
T 2ph3_A          161 GFTRAVAKEYAQRGITVNAVAPGFIETEMTERL---P----QEVKEAYLK------QIP-----AGRFGRPEEVAEAVAF  222 (245)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTS---C----HHHHHHHHH------TCT-----TCSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHcCeEEEEEEEEeecCcchhhc---C----HHHHHHHHh------cCC-----CCCCcCHHHHHHHHHH
Confidence            86653      3589999999999987643210   0    011111111      111     1347899999999999


Q ss_pred             HhcCCC--CCCCeeEecccc
Q 023205          262 AATDPV--FPPGIVDVHGIL  279 (286)
Q Consensus       262 ~l~~~~--~~~~~~~l~~~~  279 (286)
                      ++..+.  ..|+.|++.|+.
T Consensus       223 l~~~~~~~~~G~~~~v~gg~  242 (245)
T 2ph3_A          223 LVSEKAGYITGQTLCVDGGL  242 (245)
T ss_dssp             HTSGGGTTCCSCEEEESTTC
T ss_pred             HhCcccccccCCEEEECCCC
Confidence            997643  358899998863

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=99.90  E-value=3.3e-23  Score=173.33  Aligned_cols=216  Identities=16%  Similarity=0.094  Sum_probs=149.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc---ccc----CCceeEEeccCCCHhHHHHHhc------CC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR---DSW----ANNVIWHQGNLLSSDSWKEALD------GV  122 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~---~~~----~~~~~~i~~Dl~d~~~~~~~~~------~~  122 (286)
                      .++|+||||+|+||++++++|+++|++|++++|+.++...   +..    ..++.++.+|++|+++++++++      ++
T Consensus         7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~gi   86 (260)
T 2z1n_A            7 GKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDLGGA   86 (260)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHTTCC
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence            5789999999999999999999999999999998643211   100    2278899999999999988886      69


Q ss_pred             CEEEEccccCCC----------cchhhhhhhHHHHHHHHHH----HHcCCCEEEEEecCCcCCCCccccchHHHHHHHHH
Q 023205          123 TAVISCVGGFGS----------NSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKRAAET  188 (286)
Q Consensus       123 d~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a----~~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~  188 (286)
                      |+||||||....          ....+++|+.++.++.+++    ++.+.++||++||............|+.+|...+.
T Consensus        87 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~  166 (260)
T 2z1n_A           87 DILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLRPWQDLALSNIMRLPVIG  166 (260)
T ss_dssp             SEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHTHHHHH
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCCCchhHHHHHHHHH
Confidence            999999986421          1346689999987666655    35567899999995332333456789999999998


Q ss_pred             HHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHH-HHhcccCCCCCCCCCccCCCccHHHHHHHHHH
Q 023205          189 ELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMV-LQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVR  261 (286)
Q Consensus       189 ~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~  261 (286)
                      +.+.      ..|+++++++||.++++........... ........ ....  ....|     ...+.+++|+|++++.
T Consensus       167 ~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~p-----~~r~~~~~dva~~v~~  238 (260)
T 2z1n_A          167 VVRTLALELAPHGVTVNAVLPSLILTDRVRSLAEERAR-RSGITVEEALKSM--ASRIP-----MGRVGKPEELASVVAF  238 (260)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECHHHHCCCC--------------------------CCT-----TSSCCCHHHHHHHHHH
T ss_pred             HHHHHHHHHhhhCeEEEEEEECCcccchhhhhhhhhhc-ccCCcHHHHHHHH--HhcCC-----CCCccCHHHHHHHHHH
Confidence            7653      4589999999999988754311000000 00000000 0000  01112     1346899999999999


Q ss_pred             HhcCC--CCCCCeeEecccc
Q 023205          262 AATDP--VFPPGIVDVHGIL  279 (286)
Q Consensus       262 ~l~~~--~~~~~~~~l~~~~  279 (286)
                      ++..+  ...|+.+++.|+.
T Consensus       239 l~s~~~~~~tG~~i~vdGG~  258 (260)
T 2z1n_A          239 LASEKASFITGAVIPVDGGA  258 (260)
T ss_dssp             HTSGGGTTCCSCEEEESTTT
T ss_pred             HhCccccCCCCCEEEeCCCc
Confidence            99753  3468899998874

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.90  E-value=1.5e-23  Score=175.84  Aligned_cols=218  Identities=14%  Similarity=0.092  Sum_probs=153.2

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc-----cccCCceeEEeccCCCHhHHHHHhc-------CC
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------GV  122 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~-----~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~  122 (286)
                      ..++++||||+|+||++++++|+++|++|++++|+.++...     .....++.++.+|++|+++++++++       .+
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   89 (264)
T 3ucx_A           10 TDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAYGRV   89 (264)
T ss_dssp             TTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTSCC
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            45789999999999999999999999999999998654211     1123578999999999999887775       68


Q ss_pred             CEEEEccccCCC-----------cchhhhhhhHHHHHHHHHHHH----cCCCEEEEEecCCcCCCCccccchHHHHHHHH
Q 023205          123 TAVISCVGGFGS-----------NSYMYKINGTANINAIRAASE----KGVKRFVYISAADFGVANYLLQGYYEGKRAAE  187 (286)
Q Consensus       123 d~vi~~a~~~~~-----------~~~~~~~~~~~~~~l~~~a~~----~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E  187 (286)
                      |++|||||....           ....+++|+.++.++++++..    .+ .+||++||............|+.+|...+
T Consensus        90 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~asKaa~~  168 (264)
T 3ucx_A           90 DVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESK-GAVVNVNSMVVRHSQAKYGAYKMAKSALL  168 (264)
T ss_dssp             SEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHT-CEEEEECCGGGGCCCTTCHHHHHHHHHHH
T ss_pred             cEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEECcchhccCCCccHHHHHHHHHHH
Confidence            999999976421           134578999999999887643    33 69999999643333445678999999999


Q ss_pred             HHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHH
Q 023205          188 TELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVR  261 (286)
Q Consensus       188 ~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~  261 (286)
                      .+.+.      ..|+++++++||.+.++.................+.+.....  ...|     ...+.+++|+|++++.
T Consensus       169 ~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~p-----~~r~~~p~dvA~~v~~  241 (264)
T 3ucx_A          169 AMSQTLATELGEKGIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAA--AGSD-----LKRLPTEDEVASAILF  241 (264)
T ss_dssp             HHHHHHHHHHHTTTCEEEEEEESSCBSHHHHHHHHHHHHHTTCCHHHHHHHHH--TTSS-----SSSCCBHHHHHHHHHH
T ss_pred             HHHHHHHHHhCccCeEEEEEecCccccccHHHHHHhhhhhcCCCHHHHHHHHh--ccCC-----cccCCCHHHHHHHHHH
Confidence            87653      478999999999998764311100000000000011111111  1112     2357899999999999


Q ss_pred             HhcCC--CCCCCeeEeccccc
Q 023205          262 AATDP--VFPPGIVDVHGILR  280 (286)
Q Consensus       262 ~l~~~--~~~~~~~~l~~~~~  280 (286)
                      ++...  ...|+++++.|+..
T Consensus       242 L~s~~~~~itG~~i~vdGG~~  262 (264)
T 3ucx_A          242 MASDLASGITGQALDVNCGEY  262 (264)
T ss_dssp             HHSGGGTTCCSCEEEESTTSS
T ss_pred             HcCccccCCCCCEEEECCCcc
Confidence            99753  35689999998764

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=99.90  E-value=1.8e-22  Score=167.67  Aligned_cols=203  Identities=18%  Similarity=0.149  Sum_probs=146.4

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhc-------CCCEEEE
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD-------GVTAVIS  127 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d~vi~  127 (286)
                      ..++|+||||+|+||++++++|+++|++|++++|+.++..      .+..+.+|++|+++++++++       ++|++||
T Consensus        14 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~------~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~   87 (247)
T 1uzm_A           14 VSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPK------GLFGVEVDVTDSDAVDRAFTAVEEHQGPVEVLVS   87 (247)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT------TSEEEECCTTCHHHHHHHHHHHHHHHSSCSEEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHH------HhcCeeccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            3578999999999999999999999999999999865421      22248899999998887765       5799999


Q ss_pred             ccccCCC----------cchhhhhhhHHHHHHHHHHHH----cCCCEEEEEecCCcCCCCccccchHHHHHHHHHHHHH-
Q 023205          128 CVGGFGS----------NSYMYKINGTANINAIRAASE----KGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLT-  192 (286)
Q Consensus       128 ~a~~~~~----------~~~~~~~~~~~~~~l~~~a~~----~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~~-  192 (286)
                      |||....          ....+++|+.++.++++++..    .+..+||++||............|+.+|...+.+.+. 
T Consensus        88 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~l  167 (247)
T 1uzm_A           88 NAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAASKAGVIGMARSI  167 (247)
T ss_dssp             ECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----CCHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhccCCCCChhHHHHHHHHHHHHHHH
Confidence            9986531          235678999999988887753    5667999999953222233456899999999886653 


Q ss_pred             -----hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcCC-
Q 023205          193 -----RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDP-  266 (286)
Q Consensus       193 -----~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~-  266 (286)
                           ..|+++++++||.+.++.....        .  ........   ...|.     ..+++++|+|++++.++..+ 
T Consensus       168 a~e~~~~gi~v~~v~PG~v~t~~~~~~--------~--~~~~~~~~---~~~p~-----~~~~~~~dvA~~~~~l~s~~~  229 (247)
T 1uzm_A          168 ARELSKANVTANVVAPGYIDTDMTRAL--------D--ERIQQGAL---QFIPA-----KRVGTPAEVAGVVSFLASEDA  229 (247)
T ss_dssp             HHHHGGGTEEEEEEEECSBCCHHHHHS--------C--HHHHHHHG---GGCTT-----CSCBCHHHHHHHHHHHHSGGG
T ss_pred             HHHhhhcCcEEEEEEeCCCcccchhhc--------C--HHHHHHHH---hcCCC-----CCCcCHHHHHHHHHHHcCccc
Confidence                 4689999999999975421100        0  00111111   11221     24789999999999999753 


Q ss_pred             -CCCCCeeEecccccc
Q 023205          267 -VFPPGIVDVHGILRY  281 (286)
Q Consensus       267 -~~~~~~~~l~~~~~~  281 (286)
                       ...|+.+++.|+..+
T Consensus       230 ~~~~G~~i~vdgG~~~  245 (247)
T 1uzm_A          230 SYISGAVIPVDGGMGM  245 (247)
T ss_dssp             TTCCSCEEEESTTTTC
T ss_pred             cCCcCCEEEECCCccc
Confidence             346899999987644

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=99.90  E-value=6.1e-23  Score=173.48  Aligned_cols=216  Identities=13%  Similarity=0.058  Sum_probs=157.0

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc-----cccCCceeEEeccCCCHhHHHHHhc-------CC
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------GV  122 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~-----~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~  122 (286)
                      ..+++|||||+|+||++++++|+++|++|++++|+.++...     .....++.++.+|++|+++++++++       ++
T Consensus         7 ~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   86 (280)
T 3tox_A            7 EGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRFGGL   86 (280)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            46789999999999999999999999999999998654211     1123578999999999998888775       68


Q ss_pred             CEEEEccccCCC-----------cchhhhhhhHHHHHHHHHHHH----cCCCEEEEEecCC-cCCCCccccchHHHHHHH
Q 023205          123 TAVISCVGGFGS-----------NSYMYKINGTANINAIRAASE----KGVKRFVYISAAD-FGVANYLLQGYYEGKRAA  186 (286)
Q Consensus       123 d~vi~~a~~~~~-----------~~~~~~~~~~~~~~l~~~a~~----~~v~~~v~~Ss~~-~~~~~~~~~~y~~sK~~~  186 (286)
                      |++|||||....           ....+++|+.++.++++++..    .+..+||++||.. +.........|+.+|...
T Consensus        87 D~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~asKaa~  166 (280)
T 3tox_A           87 DTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTAGFAGVAPYAASKAGL  166 (280)
T ss_dssp             CEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBTTTBCCTTCHHHHHHHHHH
T ss_pred             CEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhCcCCCCCchhHHHHHHHH
Confidence            999999996521           135678999999998888753    3456999999953 223344567899999999


Q ss_pred             HHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHH
Q 023205          187 ETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAV  260 (286)
Q Consensus       187 E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~  260 (286)
                      +.+.+.      ..|+++++|+||.+.++........   ........+..      ..|     ...+.+++|+|++++
T Consensus       167 ~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~---~~~~~~~~~~~------~~p-----~~r~~~pedvA~~v~  232 (280)
T 3tox_A          167 IGLVQALAVELGARGIRVNALLPGGTDTPANFANLPG---AAPETRGFVEG------LHA-----LKRIARPEEIAEAAL  232 (280)
T ss_dssp             HHHHHHHHHHHHTTTEEEEEEEECSBSSTTSGGGSTT---CCTHHHHHHHT------TST-----TSSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHhhhcCeEEEEEEECCCCCchhhhhccc---cCHHHHHHHhc------cCc-----cCCCcCHHHHHHHHH
Confidence            987653      4689999999999988754221100   00111111111      111     234689999999999


Q ss_pred             HHhcCC--CCCCCeeEeccccccccc
Q 023205          261 RAATDP--VFPPGIVDVHGILRYSQK  284 (286)
Q Consensus       261 ~~l~~~--~~~~~~~~l~~~~~~s~~  284 (286)
                      .++..+  ...|+++++.|+..++..
T Consensus       233 ~L~s~~a~~itG~~i~vdGG~~~~~~  258 (280)
T 3tox_A          233 YLASDGASFVTGAALLADGGASVTKA  258 (280)
T ss_dssp             HHHSGGGTTCCSCEEEESTTGGGCC-
T ss_pred             HHhCccccCCcCcEEEECCCcccccc
Confidence            999764  356899999998877643

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=99.90  E-value=4.8e-23  Score=173.53  Aligned_cols=212  Identities=16%  Similarity=0.082  Sum_probs=154.0

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCccc--c--cccCCceeEEeccCCCHhHHHHHhc------CCCE
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSL--R--DSWANNVIWHQGNLLSSDSWKEALD------GVTA  124 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~--~--~~~~~~~~~i~~Dl~d~~~~~~~~~------~~d~  124 (286)
                      ..++++||||+|+||++++++|+++|++|++++|+.....  .  .....++.++.+|++|.++++++.+      ++|+
T Consensus        30 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~g~iD~  109 (273)
T 3uf0_A           30 AGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGVKEVADEIADGGGSAEAVVADLADLEGAANVAEELAATRRVDV  109 (273)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTHHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHhcCCCcE
Confidence            4679999999999999999999999999999997643211  0  1123578999999999988877654      6899


Q ss_pred             EEEccccCCC----------cchhhhhhhHHHHHHHHHH----HHcCCCEEEEEecCCcCCCCccccchHHHHHHHHHHH
Q 023205          125 VISCVGGFGS----------NSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETEL  190 (286)
Q Consensus       125 vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a----~~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~  190 (286)
                      +|||||....          ....+++|+.++.++++++    ++.+..+||++||............|+.+|...+.+.
T Consensus       110 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaa~~~l~  189 (273)
T 3uf0_A          110 LVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQGGRNVAAYAASKHAVVGLT  189 (273)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSCHHHHHHHHHHHHHH
T ss_pred             EEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchHhcCCCCCChhHHHHHHHHHHHH
Confidence            9999997532          1356789999999998877    3456679999999543333445678999999999877


Q ss_pred             HH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhc
Q 023205          191 LT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAAT  264 (286)
Q Consensus       191 ~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~  264 (286)
                      +.      ..|+++++++||.+.++........     ......+..      ..|.     ..+.+++|+|++++.++.
T Consensus       190 ~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~-----~~~~~~~~~------~~p~-----~r~~~pedva~~v~~L~s  253 (273)
T 3uf0_A          190 RALASEWAGRGVGVNALAPGYVVTANTAALRAD-----DERAAEITA------RIPA-----GRWATPEDMVGPAVFLAS  253 (273)
T ss_dssp             HHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTS-----HHHHHHHHH------HSTT-----SSCBCGGGGHHHHHHHHS
T ss_pred             HHHHHHHhhcCcEEEEEEeCCCcCCchhhcccC-----HHHHHHHHh------cCCC-----CCCCCHHHHHHHHHHHhC
Confidence            53      4689999999999987643211000     001111111      1121     346889999999999997


Q ss_pred             CC--CCCCCeeEeccccccc
Q 023205          265 DP--VFPPGIVDVHGILRYS  282 (286)
Q Consensus       265 ~~--~~~~~~~~l~~~~~~s  282 (286)
                      ..  ...|+++++.|+..+|
T Consensus       254 ~~a~~itG~~i~vdGG~~~s  273 (273)
T 3uf0_A          254 DAASYVHGQVLAVDGGWLAS  273 (273)
T ss_dssp             GGGTTCCSCEEEESTTGGGC
T ss_pred             chhcCCcCCEEEECcCccCC
Confidence            53  3568999999986553

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=99.90  E-value=6.2e-23  Score=172.53  Aligned_cols=215  Identities=17%  Similarity=0.126  Sum_probs=151.9

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhc-------CCCEEE
Q 023205           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD-------GVTAVI  126 (286)
Q Consensus        54 ~~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d~vi  126 (286)
                      ...|+||||||+|+||++++++|+++|++|++++|+....     ...+..+++|++|++++.++++       .+|++|
T Consensus        12 ~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv   86 (269)
T 3vtz_A           12 FTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSD-----VNVSDHFKIDVTNEEEVKEAVEKTTKKYGRIDILV   86 (269)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--C-----TTSSEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhc-----cCceeEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            3578999999999999999999999999999999987553     2367889999999998888775       689999


Q ss_pred             EccccCCC----------cchhhhhhhHHHHHHHHHHHH----cCCCEEEEEecCCcCCCCccccchHHHHHHHHHHHHH
Q 023205          127 SCVGGFGS----------NSYMYKINGTANINAIRAASE----KGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLT  192 (286)
Q Consensus       127 ~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~~----~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~~  192 (286)
                      ||||....          ....+++|+.++.++++++..    .+..+||++||............|+.+|...+.+.+.
T Consensus        87 ~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~  166 (269)
T 3vtz_A           87 NNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYAATKNAAAYVTSKHALLGLTRS  166 (269)
T ss_dssp             ECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCTTCHHHHHHHHHHHHHHHH
T ss_pred             ECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCCCChhHHHHHHHHHHHHHH
Confidence            99996532          124567999999988887643    4567999999954333344567899999999987753


Q ss_pred             -----hCCCcEEEEeeCeeecCCCCCccccCccccCch-HHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcCC
Q 023205          193 -----RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSP-MEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDP  266 (286)
Q Consensus       193 -----~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~  266 (286)
                           ..++++++++||.+.++................ .+.......   ..|     ...+.+++|+|++++.++...
T Consensus       167 la~e~~~~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~p-----~~r~~~pedvA~~v~~L~s~~  238 (269)
T 3vtz_A          167 VAIDYAPKIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGR---QHP-----MGRIGRPEEVAEVVAFLASDR  238 (269)
T ss_dssp             HHHHHTTTEEEEEEEECSBCCHHHHHHHHHHHCCSTTHHHHHHHHHHH---HST-----TSSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHhcCCCEEEEEEECCCcCcchhhhhhccccccchhhHHHHHHHHh---cCC-----CCCCcCHHHHHHHHHHHhCCc
Confidence                 238999999999998653211000000000000 011111100   111     234679999999999999754


Q ss_pred             --CCCCCeeEecccccc
Q 023205          267 --VFPPGIVDVHGILRY  281 (286)
Q Consensus       267 --~~~~~~~~l~~~~~~  281 (286)
                        ...|+++++.|+...
T Consensus       239 ~~~itG~~i~vdGG~~~  255 (269)
T 3vtz_A          239 SSFITGACLTVDGGLLS  255 (269)
T ss_dssp             GTTCCSCEEEESTTGGG
T ss_pred             cCCCcCcEEEECCCccc
Confidence              356899999997654

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=99.90  E-value=1.4e-22  Score=172.25  Aligned_cols=211  Identities=15%  Similarity=0.117  Sum_probs=155.5

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc------cccCCceeEEeccCCCHhHHHHHhc-------C
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD-------G  121 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~------~~~~~~~~~i~~Dl~d~~~~~~~~~-------~  121 (286)
                      ..++||||||+|+||++++++|+++|++|++++|+..+...      .....++.++.+|++|+++++++++       .
T Consensus        46 ~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  125 (291)
T 3ijr_A           46 KGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQLGS  125 (291)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            46799999999999999999999999999999998753211      1223578999999999998887775       6


Q ss_pred             CCEEEEccccCCC-----------cchhhhhhhHHHHHHHHHHHHcC--CCEEEEEecCCcCCCCccccchHHHHHHHHH
Q 023205          122 VTAVISCVGGFGS-----------NSYMYKINGTANINAIRAASEKG--VKRFVYISAADFGVANYLLQGYYEGKRAAET  188 (286)
Q Consensus       122 ~d~vi~~a~~~~~-----------~~~~~~~~~~~~~~l~~~a~~~~--v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~  188 (286)
                      +|++|||||....           ....+++|+.++.++++++....  ..+||++||............|+.+|...|.
T Consensus       126 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~  205 (291)
T 3ijr_A          126 LNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIVAYEGNETLIDYSATKGAIVA  205 (291)
T ss_dssp             CCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTHHHHCCTTCHHHHHHHHHHHH
T ss_pred             CCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechHhcCCCCCChhHHHHHHHHHH
Confidence            8999999986421           13567899999999999997653  3489999996322233445789999999998


Q ss_pred             HHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHH
Q 023205          189 ELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRA  262 (286)
Q Consensus       189 ~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~  262 (286)
                      +.+.      ..|+++++++||.+.++......       .  .+.... .  ....|     ...+.+++|+|++++.+
T Consensus       206 l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~-------~--~~~~~~-~--~~~~p-----~~r~~~p~dvA~~v~~L  268 (291)
T 3ijr_A          206 FTRSLSQSLVQKGIRVNGVAPGPIWTPLIPSSF-------D--EKKVSQ-F--GSNVP-----MQRPGQPYELAPAYVYL  268 (291)
T ss_dssp             HHHHHHHHHGGGTCEEEEEEECSBCSTHHHHHS-------C--HHHHHH-T--TTTST-----TSSCBCGGGTHHHHHHH
T ss_pred             HHHHHHHHHhhcCEEEEEEeeCCCcCCcccccC-------C--HHHHHH-H--HccCC-----CCCCcCHHHHHHHHHHH
Confidence            7653      45899999999999876421100       0  011111 1  11122     23578999999999999


Q ss_pred             hcCC--CCCCCeeEeccccccc
Q 023205          263 ATDP--VFPPGIVDVHGILRYS  282 (286)
Q Consensus       263 l~~~--~~~~~~~~l~~~~~~s  282 (286)
                      +...  ...|+++++.|+..+.
T Consensus       269 ~s~~~~~itG~~i~vdGG~~~~  290 (291)
T 3ijr_A          269 ASSDSSYVTGQMIHVNGGVIVN  290 (291)
T ss_dssp             HSGGGTTCCSCEEEESSSCCCC
T ss_pred             hCCccCCCcCCEEEECCCcccC
Confidence            9754  3568999999986553

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=99.90  E-value=4.7e-23  Score=173.89  Aligned_cols=207  Identities=18%  Similarity=0.197  Sum_probs=150.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEec-CCCcccc---c---ccCCceeEEeccCCCH----hHHHHHhc----
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSR-SGRSSLR---D---SWANNVIWHQGNLLSS----DSWKEALD----  120 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R-~~~~~~~---~---~~~~~~~~i~~Dl~d~----~~~~~~~~----  120 (286)
                      .++++||||+|+||++++++|+++|++|++++| +.++...   +   ....++.++.+|++|.    ++++++++    
T Consensus        11 ~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   90 (276)
T 1mxh_A           11 CPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFR   90 (276)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHHHHH
Confidence            468999999999999999999999999999999 5432111   0   0035789999999999    88887775    


Q ss_pred             ---CCCEEEEccccCCC---------------------cchhhhhhhHHHHHHHHHHHHc---CC------CEEEEEecC
Q 023205          121 ---GVTAVISCVGGFGS---------------------NSYMYKINGTANINAIRAASEK---GV------KRFVYISAA  167 (286)
Q Consensus       121 ---~~d~vi~~a~~~~~---------------------~~~~~~~~~~~~~~l~~~a~~~---~v------~~~v~~Ss~  167 (286)
                         ++|+||||||....                     ....+++|+.++.++++++...   +.      .+||++||.
T Consensus        91 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~  170 (276)
T 1mxh_A           91 AFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDA  170 (276)
T ss_dssp             HHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECCG
T ss_pred             hcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHhcCCCCCCCCcEEEEECch
Confidence               68999999986421                     1245789999999999998774   33      699999995


Q ss_pred             CcCCCCccccchHHHHHHHHHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCC
Q 023205          168 DFGVANYLLQGYYEGKRAAETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPL  241 (286)
Q Consensus       168 ~~~~~~~~~~~y~~sK~~~E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (286)
                      ...........|+.+|...+.+.+.      ..|+++++|+||.+.++ .  ..  +    .   ........   ..|.
T Consensus       171 ~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~-~--~~--~----~---~~~~~~~~---~~p~  235 (276)
T 1mxh_A          171 MTDLPLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP-P--AM--P----Q---ETQEEYRR---KVPL  235 (276)
T ss_dssp             GGGSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC-S--SS--C----H---HHHHHHHT---TCTT
T ss_pred             hhcCCCCCCeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCC-c--cC--C----H---HHHHHHHh---cCCC
Confidence            3323334567899999999987653      35899999999999987 2  11  0    0   11111111   1222


Q ss_pred             CCCccCCCccHHHHHHHHHHHhcCCC--CCCCeeEecccccc
Q 023205          242 VGPLFTPPVNVTVVAKVAVRAATDPV--FPPGIVDVHGILRY  281 (286)
Q Consensus       242 ~g~~~~~~i~v~Dva~~~~~~l~~~~--~~~~~~~l~~~~~~  281 (286)
                          ...+.+++|+|++++.++..+.  ..|+++++.|+..+
T Consensus       236 ----~r~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~~~  273 (276)
T 1mxh_A          236 ----GQSEASAAQIADAIAFLVSKDAGYITGTTLKVDGGLIL  273 (276)
T ss_dssp             ----TSCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             ----CCCCCCHHHHHHHHHHHhCccccCccCcEEEECCchhc
Confidence                1127899999999999997533  35889999988644

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=99.90  E-value=1.7e-22  Score=167.70  Aligned_cols=206  Identities=16%  Similarity=0.100  Sum_probs=148.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEec-CCCcccc-----cccCCceeEEeccCCCHhHHHHHhc-------CC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSR-SGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------GV  122 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R-~~~~~~~-----~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~  122 (286)
                      .++++||||+|+||++++++|+++|++|+++.| +.++...     .....++.++.+|++|+++++++++       ++
T Consensus         4 ~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   83 (246)
T 2uvd_A            4 GKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVFGQV   83 (246)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            578999999999999999999999999999999 4332110     0113468899999999999888776       68


Q ss_pred             CEEEEccccCCC----------cchhhhhhhHHHHHHHHHHH----HcCCCEEEEEecCCcCCCCccccchHHHHHHHHH
Q 023205          123 TAVISCVGGFGS----------NSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEGKRAAET  188 (286)
Q Consensus       123 d~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~----~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~  188 (286)
                      |++|||||....          ....+++|+.++.++.+++.    +.+.++||++||............|+.+|...+.
T Consensus        84 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~  163 (246)
T 2uvd_A           84 DILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVTGNPGQANYVAAKAGVIG  163 (246)
T ss_dssp             CEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTBHHHHHHHHHHHH
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCHHhcCCCCCCchHHHHHHHHHH
Confidence            999999996532          13467899999777766653    4567799999995321223345689999999888


Q ss_pred             HHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHH
Q 023205          189 ELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRA  262 (286)
Q Consensus       189 ~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~  262 (286)
                      +.+.      ..|+++++++||.+.++.....   +    ......+..      ..|.     ..+++++|+|++++.+
T Consensus       164 ~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~---~----~~~~~~~~~------~~p~-----~~~~~~~dvA~~~~~l  225 (246)
T 2uvd_A          164 LTKTSAKELASRNITVNAIAPGFIATDMTDVL---D----ENIKAEMLK------LIPA-----AQFGEAQDIANAVTFF  225 (246)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECSBGGGCSSCC---C----TTHHHHHHH------TCTT-----CSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHhhhcCeEEEEEEeccccCcchhhc---C----HHHHHHHHh------cCCC-----CCCcCHHHHHHHHHHH
Confidence            6542      4689999999999977643211   0    111111111      1121     2478999999999999


Q ss_pred             hcCCC--CCCCeeEecccc
Q 023205          263 ATDPV--FPPGIVDVHGIL  279 (286)
Q Consensus       263 l~~~~--~~~~~~~l~~~~  279 (286)
                      +..+.  ..|+.+++.|+.
T Consensus       226 ~s~~~~~~tG~~~~vdgG~  244 (246)
T 2uvd_A          226 ASDQSKYITGQTLNVDGGM  244 (246)
T ss_dssp             HSGGGTTCCSCEEEESTTS
T ss_pred             cCchhcCCCCCEEEECcCc
Confidence            97542  468899998874

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=99.90  E-value=7.1e-23  Score=172.98  Aligned_cols=217  Identities=15%  Similarity=0.113  Sum_probs=153.3

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCc-----------ccc------cccCCceeEEeccCCCHhHHHH
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRS-----------SLR------DSWANNVIWHQGNLLSSDSWKE  117 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~-----------~~~------~~~~~~~~~i~~Dl~d~~~~~~  117 (286)
                      ..+++|||||+|+||++++++|+++|++|++++|+...           ...      .....++.++++|++|++++++
T Consensus        12 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   91 (278)
T 3sx2_A           12 TGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESLSA   91 (278)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHH
Confidence            46799999999999999999999999999999987321           000      1123578999999999999888


Q ss_pred             Hhc-------CCCEEEEccccCCC------cchhhhhhhHHHHHHHHHHHH----cC-CCEEEEEecCC-c-CC--CCcc
Q 023205          118 ALD-------GVTAVISCVGGFGS------NSYMYKINGTANINAIRAASE----KG-VKRFVYISAAD-F-GV--ANYL  175 (286)
Q Consensus       118 ~~~-------~~d~vi~~a~~~~~------~~~~~~~~~~~~~~l~~~a~~----~~-v~~~v~~Ss~~-~-~~--~~~~  175 (286)
                      +++       .+|++|||||....      +...+++|+.++.++++++..    .+ ..+||++||.. + +.  ....
T Consensus        92 ~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  171 (278)
T 3sx2_A           92 ALQAGLDELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVGSADPG  171 (278)
T ss_dssp             HHHHHHHHHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCCCSSHH
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHhcCCCccCCCC
Confidence            876       68999999997532      245678999999999888743    22 45899999952 1 11  1134


Q ss_pred             ccchHHHHHHHHHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCC-ccCC
Q 023205          176 LQGYYEGKRAAETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGP-LFTP  248 (286)
Q Consensus       176 ~~~y~~sK~~~E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~  248 (286)
                      ...|+.+|...+.+.+.      ..|+++++++||.+.++......         ..+++.............++ ....
T Consensus       172 ~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~p~~  242 (278)
T 3sx2_A          172 SVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINNEF---------TREWLAKMAAATDTPGAMGNAMPVE  242 (278)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHH---------HHHHHHHHHHHCC--CTTSCSSSCS
T ss_pred             chHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccchhhh---------HHHHHhhccchhhhhhhhhhhcCcC
Confidence            56799999999987653      46899999999999887543210         01111111111111111111 1246


Q ss_pred             CccHHHHHHHHHHHhcCC--CCCCCeeEeccccc
Q 023205          249 PVNVTVVAKVAVRAATDP--VFPPGIVDVHGILR  280 (286)
Q Consensus       249 ~i~v~Dva~~~~~~l~~~--~~~~~~~~l~~~~~  280 (286)
                      +++++|+|++++.++...  ...|+++++.|+..
T Consensus       243 ~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG~~  276 (278)
T 3sx2_A          243 VLAPEDVANAVAWLVSDQARYITGVTLPVDAGFL  276 (278)
T ss_dssp             SBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTTT
T ss_pred             cCCHHHHHHHHHHHhCcccccccCCEEeECCCcc
Confidence            789999999999999653  35689999988743

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=99.90  E-value=4.1e-23  Score=173.80  Aligned_cols=197  Identities=15%  Similarity=0.043  Sum_probs=138.4

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc--cccCCceeEEeccCCCHhHHHHHhc-------CCCEE
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSWANNVIWHQGNLLSSDSWKEALD-------GVTAV  125 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~--~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d~v  125 (286)
                      .++++|||||+|+||++++++|+++|++|++++|+.++...  .....++.++.+|++|+++++++++       ++|++
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l  106 (272)
T 4dyv_A           27 GKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGDDALCVPTDVTDPDSVRALFTATVEKFGRVDVL  106 (272)
T ss_dssp             -CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTSCCEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            46789999999999999999999999999999998654211  1223578999999999999888876       78999


Q ss_pred             EEccccCCC-----------cchhhhhhhHHHHHHHHHHHH----cC--CCEEEEEecCCcCCCCccccchHHHHHHHHH
Q 023205          126 ISCVGGFGS-----------NSYMYKINGTANINAIRAASE----KG--VKRFVYISAADFGVANYLLQGYYEGKRAAET  188 (286)
Q Consensus       126 i~~a~~~~~-----------~~~~~~~~~~~~~~l~~~a~~----~~--v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~  188 (286)
                      |||||....           ....+++|+.++.++++++..    .+  ..+||++||............|+.+|...+.
T Consensus       107 VnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaa~~~  186 (272)
T 4dyv_A          107 FNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSPRPYSAPYTATKHAITG  186 (272)
T ss_dssp             EECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTSCCTTCHHHHHHHHHHHH
T ss_pred             EECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcCCCCCchHHHHHHHHHHH
Confidence            999997432           135678999999888887654    22  3589999996433344456789999999998


Q ss_pred             HHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHH
Q 023205          189 ELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRA  262 (286)
Q Consensus       189 ~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~  262 (286)
                      +.+.      ..|+++++++||.+..+......           .....   .....     ....+.+++|+|++++.+
T Consensus       187 l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~-----------~~~~~---~~~~~-----~~~~~~~pedvA~~v~fL  247 (272)
T 4dyv_A          187 LTKSTSLDGRVHDIACGQIDIGNADTPMAQKMK-----------AGVPQ---ADLSI-----KVEPVMDVAHVASAVVYM  247 (272)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEEEECC-------------------------------------------CHHHHHHHHHHH
T ss_pred             HHHHHHHHhCccCEEEEEEEECcccChhhhhhc-----------ccchh---hhhcc-----cccCCCCHHHHHHHHHHH
Confidence            7653      46899999999999765432110           00000   00011     123478999999999999


Q ss_pred             hcCCCCCC
Q 023205          263 ATDPVFPP  270 (286)
Q Consensus       263 l~~~~~~~  270 (286)
                      +..+....
T Consensus       248 ~s~~~~~~  255 (272)
T 4dyv_A          248 ASLPLDAN  255 (272)
T ss_dssp             HHSCTTSC
T ss_pred             hCCCCcCc
Confidence            98776433

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=99.90  E-value=1.4e-23  Score=174.95  Aligned_cols=213  Identities=15%  Similarity=0.049  Sum_probs=152.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCe-EEEEecCCCcc-cc---cc-cCCceeEEeccCCCH-hHHHHHhc-------C
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLT-VASLSRSGRSS-LR---DS-WANNVIWHQGNLLSS-DSWKEALD-------G  121 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~-V~~l~R~~~~~-~~---~~-~~~~~~~i~~Dl~d~-~~~~~~~~-------~  121 (286)
                      .++|+||||+|+||++++++|+++|++ |++++|+.... ..   .. ...++.++.+|++|+ ++++++++       +
T Consensus         5 ~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   84 (254)
T 1sby_A            5 NKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLKT   84 (254)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHHSC
T ss_pred             CcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHHhcCC
Confidence            578999999999999999999999996 99999986421 11   11 124688999999998 77777665       7


Q ss_pred             CCEEEEccccCC--CcchhhhhhhHHHHHHHHHHHHcC-------CCEEEEEecCCcCCCCccccchHHHHHHHHHHHHH
Q 023205          122 VTAVISCVGGFG--SNSYMYKINGTANINAIRAASEKG-------VKRFVYISAADFGVANYLLQGYYEGKRAAETELLT  192 (286)
Q Consensus       122 ~d~vi~~a~~~~--~~~~~~~~~~~~~~~l~~~a~~~~-------v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~~  192 (286)
                      +|+||||||...  .....+++|+.++.++++++....       ..+||++||............|+.+|...|.+.+.
T Consensus        85 id~lv~~Ag~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~  164 (254)
T 1sby_A           85 VDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVYSASKAAVVSFTNS  164 (254)
T ss_dssp             CCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTSHHHHHHHHHHHHHHHH
T ss_pred             CCEEEECCccCCHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccCCCCchHHHHHHHHHHHHHHH
Confidence            899999999754  345778999999999999886431       34799999953323334567899999999987653


Q ss_pred             ------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcCC
Q 023205          193 ------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDP  266 (286)
Q Consensus       193 ------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~  266 (286)
                            ..|+++++++||.+.++........ .. ......   ....           ...+.+++|+|++++.++.. 
T Consensus       165 la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~-~~-~~~~~~---~~~~-----------~~~~~~~~dvA~~i~~~~~~-  227 (254)
T 1sby_A          165 LAKLAPITGVTAYSINPGITRTPLVHTFNSW-LD-VEPRVA---ELLL-----------SHPTQTSEQCGQNFVKAIEA-  227 (254)
T ss_dssp             HHHHHHHHSEEEEEEEECSEESHHHHSCCCG-GG-SCTTHH---HHHT-----------TSCCEEHHHHHHHHHHHHHH-
T ss_pred             HHHHhccCCeEEEEEecCCccCccccccchh-hh-hhHHHH---HHHh-----------cCCCCCHHHHHHHHHHHHHc-
Confidence                  2689999999999987642211000 00 000001   0000           11235899999999999874 


Q ss_pred             CCCCCeeEeccc--ccccccC
Q 023205          267 VFPPGIVDVHGI--LRYSQKS  285 (286)
Q Consensus       267 ~~~~~~~~l~~~--~~~s~~~  285 (286)
                      ...|+.|++.|+  ..++|..
T Consensus       228 ~~~G~~~~v~gG~~~~~~~~~  248 (254)
T 1sby_A          228 NKNGAIWKLDLGTLEAIEWTK  248 (254)
T ss_dssp             CCTTCEEEEETTEEEECCCCC
T ss_pred             CCCCCEEEEeCCceeEecccc
Confidence            345899999887  6677753

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=99.90  E-value=5.9e-23  Score=174.11  Aligned_cols=207  Identities=17%  Similarity=0.123  Sum_probs=148.2

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc-----cccCCceeEEeccCCCHhHHHHHhc-------CC
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------GV  122 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~-----~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~  122 (286)
                      ..++|+||||+|+||++++++|+++|++|+++.|+.++...     .....++.++.+|++|.++++++++       ++
T Consensus        43 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~i  122 (285)
T 2c07_A           43 ENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNV  122 (285)
T ss_dssp             SSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence            35789999999999999999999999999998887543211     1113468899999999999888774       68


Q ss_pred             CEEEEccccCCC----------cchhhhhhhHHHHHHHHHHH----HcCCCEEEEEecCCcCCCCccccchHHHHHHHHH
Q 023205          123 TAVISCVGGFGS----------NSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEGKRAAET  188 (286)
Q Consensus       123 d~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~----~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~  188 (286)
                      |+||||||....          ....+++|+.++.++++++.    +.+.++||++||............|+.+|...|.
T Consensus       123 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asK~a~~~  202 (285)
T 2c07_A          123 DILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSSSKAGVIG  202 (285)
T ss_dssp             CEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHHHHH
T ss_pred             CEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCCCCchHHHHHHHHHH
Confidence            999999986532          13567899999888777764    4566799999995321222345689999999988


Q ss_pred             HHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHH
Q 023205          189 ELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRA  262 (286)
Q Consensus       189 ~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~  262 (286)
                      +.+.      ..|+++++++||.+.++.....        .   +.+.....  ...|.     ..+++++|+|++++.+
T Consensus       203 ~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~--------~---~~~~~~~~--~~~~~-----~~~~~~~dvA~~~~~l  264 (285)
T 2c07_A          203 FTKSLAKELASRNITVNAIAPGFISSDMTDKI--------S---EQIKKNII--SNIPA-----GRMGTPEEVANLACFL  264 (285)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECSBCC-----C--------C---HHHHHHHH--TTCTT-----SSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCcEEEEEEeCcEecCchhhc--------C---HHHHHHHH--hhCCC-----CCCCCHHHHHHHHHHH
Confidence            6653      3589999999999987643211        0   11111111  11222     2478999999999999


Q ss_pred             hcCCC--CCCCeeEecccc
Q 023205          263 ATDPV--FPPGIVDVHGIL  279 (286)
Q Consensus       263 l~~~~--~~~~~~~l~~~~  279 (286)
                      +..+.  ..|+.+++.|+.
T Consensus       265 ~~~~~~~~~G~~i~v~gG~  283 (285)
T 2c07_A          265 SSDKSGYINGRVFVIDGGL  283 (285)
T ss_dssp             HSGGGTTCCSCEEEESTTS
T ss_pred             hCCCcCCCCCCEEEeCCCc
Confidence            97643  468899998864

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=99.90  E-value=9.3e-23  Score=170.61  Aligned_cols=219  Identities=16%  Similarity=0.121  Sum_probs=149.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCc-ccc--ccc----CCceeEEeccCCCHhHHHHHhc-------C
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRS-SLR--DSW----ANNVIWHQGNLLSSDSWKEALD-------G  121 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~-~~~--~~~----~~~~~~i~~Dl~d~~~~~~~~~-------~  121 (286)
                      .++|+||||+|+||++++++|+++|++|++++|+.++ ...  ...    ..++.++.+|++|+++++++++       +
T Consensus         4 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   83 (260)
T 1x1t_A            4 GKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMGR   83 (260)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            5789999999999999999999999999999998654 211  000    3468899999999998888775       6


Q ss_pred             CCEEEEccccCCC----------cchhhhhhhHHHHHHHHHHH----HcCCCEEEEEecCCcCCCCccccchHHHHHHHH
Q 023205          122 VTAVISCVGGFGS----------NSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEGKRAAE  187 (286)
Q Consensus       122 ~d~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~----~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E  187 (286)
                      +|++|||||....          ....+++|+.++.++++++.    +.+..+||++||............|+.+|...|
T Consensus        84 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~  163 (260)
T 1x1t_A           84 IDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVV  163 (260)
T ss_dssp             CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHHHH
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECcHHhCcCCCCCchHHHHHHHHH
Confidence            8999999986531          13467899999998888774    346679999999532223345678999999999


Q ss_pred             HHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHH
Q 023205          188 TELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVR  261 (286)
Q Consensus       188 ~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~  261 (286)
                      .+.+.      ..|+++++++||.+.++.............+...+....... ....|     ...+.+++|+|++++.
T Consensus       164 ~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~p-----~~~~~~p~dva~~~~~  237 (260)
T 1x1t_A          164 GFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELL-SEKQP-----SLQFVTPEQLGGTAVF  237 (260)
T ss_dssp             HHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CH-HHHCT-----TCCCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHhccCCEEEEEEeecCccCchHHHhhhhhccccCCchHHHHHHHh-hccCC-----CCCCcCHHHHHHHHHH
Confidence            87653      458999999999998775321100000000000000000000 00111     2357899999999999


Q ss_pred             HhcCC--CCCCCeeEeccccc
Q 023205          262 AATDP--VFPPGIVDVHGILR  280 (286)
Q Consensus       262 ~l~~~--~~~~~~~~l~~~~~  280 (286)
                      ++..+  ...|+++++.|+..
T Consensus       238 l~s~~~~~~tG~~~~vdgG~~  258 (260)
T 1x1t_A          238 LASDAAAQITGTTVSVDGGWT  258 (260)
T ss_dssp             HHSGGGTTCCSCEEEESTTGG
T ss_pred             HhChhhcCCCCCEEEECCCcc
Confidence            99753  34688999998754

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.90  E-value=1.2e-22  Score=168.46  Aligned_cols=207  Identities=17%  Similarity=0.101  Sum_probs=150.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhc-------CCCEEEEc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD-------GVTAVISC  128 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d~vi~~  128 (286)
                      .++++||||+|+||++++++|+++|++|++++|+.++........++.++.+|++|+++++++++       .+|+||||
T Consensus         5 ~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lvn~   84 (245)
T 1uls_A            5 DKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRLDGVVHY   84 (245)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEEC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            57899999999999999999999999999999986442111111148899999999998887775       48999999


Q ss_pred             cccCCC----------cchhhhhhhHHHHHHHHHHHH----cCCCEEEEEecCCcCCCCccccchHHHHHHHHHHHHH--
Q 023205          129 VGGFGS----------NSYMYKINGTANINAIRAASE----KGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLT--  192 (286)
Q Consensus       129 a~~~~~----------~~~~~~~~~~~~~~l~~~a~~----~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~~--  192 (286)
                      ||....          ....+++|+.++.++.+++..    .+..+||++||.. .........|+.+|...+.+.+.  
T Consensus        85 Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~-~~~~~~~~~Y~asK~a~~~~~~~la  163 (245)
T 1uls_A           85 AGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRV-YLGNLGQANYAASMAGVVGLTRTLA  163 (245)
T ss_dssp             CCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGG-GGCCTTCHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccch-hcCCCCchhHHHHHHHHHHHHHHHH
Confidence            996532          134568999999999888754    3567999999964 22233456899999999886643  


Q ss_pred             ----hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcCC--
Q 023205          193 ----RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDP--  266 (286)
Q Consensus       193 ----~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~--  266 (286)
                          ..|+++++++||.+..+.....   +    ....+.+..      ..|.     ..+++++|+|++++.++..+  
T Consensus       164 ~e~~~~gi~v~~v~PG~v~t~~~~~~---~----~~~~~~~~~------~~p~-----~~~~~~~dvA~~v~~l~s~~~~  225 (245)
T 1uls_A          164 LELGRWGIRVNTLAPGFIETRMTAKV---P----EKVREKAIA------ATPL-----GRAGKPLEVAYAALFLLSDESS  225 (245)
T ss_dssp             HHHGGGTEEEEEEEECSBCCTTTSSS---C----HHHHHHHHH------TCTT-----CSCBCHHHHHHHHHHHHSGGGT
T ss_pred             HHHhHhCeEEEEEEeCcCcCcchhhc---C----HHHHHHHHh------hCCC-----CCCcCHHHHHHHHHHHhCchhc
Confidence                4689999999999976643210   0    011111111      1222     23689999999999999754  


Q ss_pred             CCCCCeeEecccccc
Q 023205          267 VFPPGIVDVHGILRY  281 (286)
Q Consensus       267 ~~~~~~~~l~~~~~~  281 (286)
                      ...|+.+.+.|+..+
T Consensus       226 ~~tG~~~~vdgG~~~  240 (245)
T 1uls_A          226 FITGQVLFVDGGRTI  240 (245)
T ss_dssp             TCCSCEEEESTTTTT
T ss_pred             CCcCCEEEECCCccc
Confidence            346889999987654

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=99.90  E-value=5.1e-23  Score=171.01  Aligned_cols=208  Identities=18%  Similarity=0.107  Sum_probs=152.7

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc--cccCCceeEEeccCCCHhHHHHHhc-------CCCEE
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSWANNVIWHQGNLLSSDSWKEALD-------GVTAV  125 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~--~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d~v  125 (286)
                      ..++++||||+|+||++++++|+++|++|++++|+.++...  +....+..++.+|++|+++++++++       ++|++
T Consensus         8 ~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l   87 (248)
T 3op4_A            8 EGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITDEFGGVDIL   87 (248)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHCCCSEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceEEEEeCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            46799999999999999999999999999999998654211  1223467889999999999888776       78999


Q ss_pred             EEccccCCC----------cchhhhhhhHHHHHHHHHHHH----cCCCEEEEEecCCcCCCCccccchHHHHHHHHHHHH
Q 023205          126 ISCVGGFGS----------NSYMYKINGTANINAIRAASE----KGVKRFVYISAADFGVANYLLQGYYEGKRAAETELL  191 (286)
Q Consensus       126 i~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~~----~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~  191 (286)
                      |||||....          +...+++|+.++.++++++..    .+..+||++||............|+.+|...+.+.+
T Consensus        88 v~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~l~~  167 (248)
T 3op4_A           88 VNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTK  167 (248)
T ss_dssp             EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHHHHHHHHH
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCCCChHHHHHHHHHHHHHH
Confidence            999996532          235678999999999888743    456799999995322233456789999999888665


Q ss_pred             H------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcC
Q 023205          192 T------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATD  265 (286)
Q Consensus       192 ~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~  265 (286)
                      .      ..|+++++++||.+..+.....        .  .+.......   ..|     ...+.+++|+|++++.++..
T Consensus       168 ~la~e~~~~gi~vn~v~PG~v~T~~~~~~--------~--~~~~~~~~~---~~p-----~~r~~~p~dva~~v~~L~s~  229 (248)
T 3op4_A          168 SMAREVASRGVTVNTVAPGFIETDMTKAL--------N--DEQRTATLA---QVP-----AGRLGDPREIASAVAFLASP  229 (248)
T ss_dssp             HHHHHHGGGTEEEEEEEECSBSSTTTTTS--------C--HHHHHHHHH---TCT-----TCSCBCHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHhCeEEEEEeeCCCCCchhhhc--------C--HHHHHHHHh---cCC-----CCCCcCHHHHHHHHHHHcCC
Confidence            3      4689999999999976643211        0  011111111   112     23468999999999999875


Q ss_pred             CC--CCCCeeEeccccc
Q 023205          266 PV--FPPGIVDVHGILR  280 (286)
Q Consensus       266 ~~--~~~~~~~l~~~~~  280 (286)
                      +.  ..|+++++.|+..
T Consensus       230 ~~~~itG~~i~vdgG~~  246 (248)
T 3op4_A          230 EAAYITGETLHVNGGMY  246 (248)
T ss_dssp             GGTTCCSCEEEESTTSS
T ss_pred             ccCCccCcEEEECCCee
Confidence            43  4689999988753

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=99.90  E-value=7.2e-23  Score=170.93  Aligned_cols=211  Identities=14%  Similarity=0.108  Sum_probs=155.3

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc-----cccCCceeEEeccCCCHhHHHHHhc-------CC
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------GV  122 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~-----~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~  122 (286)
                      ..++++||||+|+||++++++|+++|++|++++|+.++...     .....++.++.+|++|+++++++++       ++
T Consensus        11 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   90 (256)
T 3gaf_A           11 NDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQFGKI   90 (256)
T ss_dssp             TTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            46799999999999999999999999999999998654211     1124578999999999998887775       68


Q ss_pred             CEEEEccccCCC---------cchhhhhhhHHHHHHHHHHH----HcCCCEEEEEecCCcCCCCccccchHHHHHHHHHH
Q 023205          123 TAVISCVGGFGS---------NSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEGKRAAETE  189 (286)
Q Consensus       123 d~vi~~a~~~~~---------~~~~~~~~~~~~~~l~~~a~----~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~  189 (286)
                      |++|||||....         ....+++|+.++.++++++.    +.+..+||++||............|+.+|...+.+
T Consensus        91 d~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~  170 (256)
T 3gaf_A           91 TVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGENTNVRMASYGSSKAAVNHL  170 (256)
T ss_dssp             CEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTCCCTTCHHHHHHHHHHHHH
T ss_pred             CEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHcCCCCCchHHHHHHHHHHHH
Confidence            999999986532         13467899999999988874    44556999999964333344567899999999987


Q ss_pred             HHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHh
Q 023205          190 LLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAA  263 (286)
Q Consensus       190 ~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l  263 (286)
                      .+.      ..|+++++++||.+..+......       .   ........  ...|     ...+.+++|+|++++.++
T Consensus       171 ~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~-------~---~~~~~~~~--~~~p-----~~r~~~~~dva~~~~~L~  233 (256)
T 3gaf_A          171 TRNIAFDVGPMGIRVNAIAPGAIKTDALATVL-------T---PEIERAML--KHTP-----LGRLGEAQDIANAALFLC  233 (256)
T ss_dssp             HHHHHHHHGGGTEEEEEEEECCBCCHHHHHHC-------C---HHHHHHHH--TTCT-----TSSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHhhhCcEEEEEEEccccCchhhhcc-------C---HHHHHHHH--hcCC-----CCCCCCHHHHHHHHHHHc
Confidence            753      46899999999999765321000       0   00111111  1112     235789999999999999


Q ss_pred             cCC--CCCCCeeEeccccccc
Q 023205          264 TDP--VFPPGIVDVHGILRYS  282 (286)
Q Consensus       264 ~~~--~~~~~~~~l~~~~~~s  282 (286)
                      ...  ...|+++++.|+...+
T Consensus       234 s~~~~~itG~~i~vdgG~~~~  254 (256)
T 3gaf_A          234 SPAAAWISGQVLTVSGGGVQE  254 (256)
T ss_dssp             SGGGTTCCSCEEEESTTSCCC
T ss_pred             CCcccCccCCEEEECCCcccc
Confidence            753  3468999999987654

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=99.90  E-value=2e-23  Score=176.69  Aligned_cols=212  Identities=18%  Similarity=0.224  Sum_probs=153.5

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc---c--cc---CCceeEEeccCCCHhHHHHHhc------
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR---D--SW---ANNVIWHQGNLLSSDSWKEALD------  120 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~---~--~~---~~~~~~i~~Dl~d~~~~~~~~~------  120 (286)
                      ..++|+||||+|+||++++++|+++|++|++++|+.++...   +  ..   ..++.++.+|++|+++++++++      
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   89 (281)
T 3svt_A           10 QDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTAWH   89 (281)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence            35799999999999999999999999999999998654211   1  11   1278899999999998887775      


Q ss_pred             -CCCEEEEccccCCC-----------cchhhhhhhHHHHHHHHHHHHc----CCCEEEEEecCCcCCCCccccchHHHHH
Q 023205          121 -GVTAVISCVGGFGS-----------NSYMYKINGTANINAIRAASEK----GVKRFVYISAADFGVANYLLQGYYEGKR  184 (286)
Q Consensus       121 -~~d~vi~~a~~~~~-----------~~~~~~~~~~~~~~l~~~a~~~----~v~~~v~~Ss~~~~~~~~~~~~y~~sK~  184 (286)
                       ++|++|||||....           +...+++|+.++.++++++...    +-.+||++||............|+.+|.
T Consensus        90 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~  169 (281)
T 3svt_A           90 GRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNTHRWFGAYGVTKS  169 (281)
T ss_dssp             SCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCTTCTHHHHHHH
T ss_pred             CCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcCCCCCChhHHHHHH
Confidence             57999999996311           1346789999999998887653    3349999999532223345678999999


Q ss_pred             HHHHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHH
Q 023205          185 AAETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKV  258 (286)
Q Consensus       185 ~~E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~  258 (286)
                      ..|.+.+.      ..|+++++++||.+.++......       . ..+.......   ..|     ...+.+++|+|++
T Consensus       170 a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~-------~-~~~~~~~~~~---~~p-----~~r~~~~~dva~~  233 (281)
T 3svt_A          170 AVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAIT-------E-SAELSSDYAM---CTP-----LPRQGEVEDVANM  233 (281)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHH-------T-CHHHHHHHHH---HCS-----SSSCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcc-------c-CHHHHHHHHh---cCC-----CCCCCCHHHHHHH
Confidence            99987753      46799999999999876432100       0 0011111110   111     1346789999999


Q ss_pred             HHHHhcCCC--CCCCeeEeccccccc
Q 023205          259 AVRAATDPV--FPPGIVDVHGILRYS  282 (286)
Q Consensus       259 ~~~~l~~~~--~~~~~~~l~~~~~~s  282 (286)
                      ++.++....  ..|+++++.|+..++
T Consensus       234 ~~~l~s~~~~~itG~~~~vdgG~~~~  259 (281)
T 3svt_A          234 AMFLLSDAASFVTGQVINVDGGQMLR  259 (281)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTGGGS
T ss_pred             HHHHhCcccCCCCCCEEEeCCChhcc
Confidence            999997543  468999999987765

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=99.90  E-value=8.1e-23  Score=171.84  Aligned_cols=212  Identities=17%  Similarity=0.157  Sum_probs=152.5

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc------cccCCceeEEeccCCCHhHHHHHhc-------
Q 023205           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD-------  120 (286)
Q Consensus        54 ~~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~------~~~~~~~~~i~~Dl~d~~~~~~~~~-------  120 (286)
                      ..+++++||||+|+||++++++|+++|++|++++|+..+...      .....++.++.+|++|.++++++++       
T Consensus        23 ~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  102 (269)
T 3gk3_A           23 QAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADFG  102 (269)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             hcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            346789999999999999999999999999999865433211      1123579999999999998887775       


Q ss_pred             CCCEEEEccccCCC----------cchhhhhhhHHHHHHHHHHHH----cCCCEEEEEecCCcCCCCccccchHHHHHHH
Q 023205          121 GVTAVISCVGGFGS----------NSYMYKINGTANINAIRAASE----KGVKRFVYISAADFGVANYLLQGYYEGKRAA  186 (286)
Q Consensus       121 ~~d~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~~----~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~  186 (286)
                      .+|+||||||....          ....+++|+.++.++++.+..    .+..+||++||............|+.+|...
T Consensus       103 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~  182 (269)
T 3gk3_A          103 KVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRGAFGQANYASAKAGI  182 (269)
T ss_dssp             CCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTBHHHHHHHHHH
T ss_pred             CCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChhhccCCCCcchHHHHHHHH
Confidence            68999999996532          134678999999988887643    4556999999953222234557899999999


Q ss_pred             HHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHH
Q 023205          187 ETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAV  260 (286)
Q Consensus       187 E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~  260 (286)
                      +.+.+.      ..|+++++++||.+..+......           ..... .......|     ...+.+++|+|++++
T Consensus       183 ~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~-----------~~~~~-~~~~~~~~-----~~~~~~p~dvA~~v~  245 (269)
T 3gk3_A          183 HGFTKTLALETAKRGITVNTVSPGYLATAMVEAVP-----------QDVLE-AKILPQIP-----VGRLGRPDEVAALIA  245 (269)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTC-------------------CCSGGGCT-----TSSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHhhhcCCEEEEEecCcccchhhhhhc-----------hhHHH-HHhhhcCC-----cCCccCHHHHHHHHH
Confidence            887652      46899999999999866432110           00000 00001111     235678999999999


Q ss_pred             HHhcCCC--CCCCeeEeccccccc
Q 023205          261 RAATDPV--FPPGIVDVHGILRYS  282 (286)
Q Consensus       261 ~~l~~~~--~~~~~~~l~~~~~~s  282 (286)
                      .++..+.  ..|+++++.|+..++
T Consensus       246 ~L~s~~~~~itG~~i~vdgG~~~s  269 (269)
T 3gk3_A          246 FLCSDDAGFVTGADLAINGGMHMS  269 (269)
T ss_dssp             HHTSTTCTTCCSCEEEESTTSCCC
T ss_pred             HHhCCCcCCeeCcEEEECCCEeCc
Confidence            9997654  568999999987653

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=99.90  E-value=8.5e-23  Score=170.91  Aligned_cols=215  Identities=13%  Similarity=0.062  Sum_probs=147.6

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc--cccCCceeEEeccCCCHhHHHHHhc-------CCCEE
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSWANNVIWHQGNLLSSDSWKEALD-------GVTAV  125 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~--~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d~v  125 (286)
                      ..++|+||||+|+||++++++|+++|++|++++|+.++...  .....++.++.+|++|.++++++++       .+|++
T Consensus         8 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   87 (261)
T 3n74_A            8 EGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDAALAVAADISKEADVDAAVEAALSKFGKVDIL   87 (261)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            35789999999999999999999999999999998654211  2224578999999999998888776       68999


Q ss_pred             EEccccCCC-----------cchhhhhhhHHHHHHHHHHHHc----C----CCEEEEEecCCcCCCCccccchHHHHHHH
Q 023205          126 ISCVGGFGS-----------NSYMYKINGTANINAIRAASEK----G----VKRFVYISAADFGVANYLLQGYYEGKRAA  186 (286)
Q Consensus       126 i~~a~~~~~-----------~~~~~~~~~~~~~~l~~~a~~~----~----v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~  186 (286)
                      |||||....           ....+++|+.++.++++++...    +    ..+||++||............|+.+|...
T Consensus        88 i~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asKaa~  167 (261)
T 3n74_A           88 VNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRPRPNLAWYNATKGWV  167 (261)
T ss_dssp             EECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTSCCTTCHHHHHHHHHH
T ss_pred             EECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcCCCCCccHHHHHHHHH
Confidence            999997531           1245689999998888877432    1    34699999964444444566799999999


Q ss_pred             HHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHH
Q 023205          187 ETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAV  260 (286)
Q Consensus       187 E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~  260 (286)
                      +.+.+.      ..|+++++++||.+.++.....+       ....+......  ....|     ...+++++|+|++++
T Consensus       168 ~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~-------~~~~~~~~~~~--~~~~~-----~~~~~~~~dva~~~~  233 (261)
T 3n74_A          168 VSVTKALAIELAPAKIRVVALNPVAGETPLLTTFM-------GEDSEEIRKKF--RDSIP-----MGRLLKPDDLAEAAA  233 (261)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEEC----------------------------------CT-----TSSCCCHHHHHHHHH
T ss_pred             HHHHHHHHHHhhhcCcEEEEEecCcccChhhhhhc-------ccCcHHHHHHH--hhcCC-----cCCCcCHHHHHHHHH
Confidence            987653      46899999999999876532111       00000000000  01111     235789999999999


Q ss_pred             HHhcCC--CCCCCeeEecccccccc
Q 023205          261 RAATDP--VFPPGIVDVHGILRYSQ  283 (286)
Q Consensus       261 ~~l~~~--~~~~~~~~l~~~~~~s~  283 (286)
                      .++...  ...|+++++.|+..++-
T Consensus       234 ~l~s~~~~~itG~~i~vdgG~~~~~  258 (261)
T 3n74_A          234 FLCSPQASMITGVALDVDGGRSIGG  258 (261)
T ss_dssp             HHTSGGGTTCCSCEEEESTTTTC--
T ss_pred             HHcCCcccCcCCcEEEecCCcccCC
Confidence            999643  35689999999877653

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=99.90  E-value=7.4e-23  Score=170.36  Aligned_cols=196  Identities=14%  Similarity=0.088  Sum_probs=148.6

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhc-------CCCEEE
Q 023205           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD-------GVTAVI  126 (286)
Q Consensus        54 ~~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d~vi  126 (286)
                      .|+++|+||||+|+||++++++|+++|++|++++|+..+..       ...+.+|++|.++++++++       .+|+||
T Consensus        20 ~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~-------~~~~~~d~~d~~~v~~~~~~~~~~~g~iD~li   92 (251)
T 3orf_A           20 HMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNA-------DHSFTIKDSGEEEIKSVIEKINSKSIKVDTFV   92 (251)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTS-------SEEEECSCSSHHHHHHHHHHHHTTTCCEEEEE
T ss_pred             ccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc-------ccceEEEeCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            45689999999999999999999999999999999976522       2457889999998887775       469999


Q ss_pred             EccccCCC-----------cchhhhhhhHHHHHHHHHHHHcCC--CEEEEEecCCcCCCCccccchHHHHHHHHHHHHH-
Q 023205          127 SCVGGFGS-----------NSYMYKINGTANINAIRAASEKGV--KRFVYISAADFGVANYLLQGYYEGKRAAETELLT-  192 (286)
Q Consensus       127 ~~a~~~~~-----------~~~~~~~~~~~~~~l~~~a~~~~v--~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~~-  192 (286)
                      ||||....           ....+++|+.++.++++++.....  .+||++||............|+.+|...|.+.+. 
T Consensus        93 ~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaa~~~~~~~l  172 (251)
T 3orf_A           93 CAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAALNRTSGMIAYGATKAATHHIIKDL  172 (251)
T ss_dssp             ECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTBHHHHHHHHHHHHHHHHH
T ss_pred             ECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhhccCCCCCchhHHHHHHHHHHHHHH
Confidence            99996421           135668999999999999876432  3899999954333344567899999999997763 


Q ss_pred             -------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcC
Q 023205          193 -------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATD  265 (286)
Q Consensus       193 -------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~  265 (286)
                             ..|+++++++||.+..+..                  .....        ......+++++|+|++++.++..
T Consensus       173 a~e~~~~~~gi~v~~v~PG~v~t~~~------------------~~~~~--------~~~~~~~~~~~dva~~i~~l~~~  226 (251)
T 3orf_A          173 ASENGGLPAGSTSLGILPVTLDTPTN------------------RKYMS--------DANFDDWTPLSEVAEKLFEWSTN  226 (251)
T ss_dssp             TSTTSSSCTTCEEEEEEESCBCCHHH------------------HHHCT--------TSCGGGSBCHHHHHHHHHHHHHC
T ss_pred             HHHhcccCCCcEEEEEecCcCcCcch------------------hhhcc--------cccccccCCHHHHHHHHHHHhcC
Confidence                   3589999999999865421                  11100        01223578999999999999987


Q ss_pred             ---CCCCCCeeEeccccccc
Q 023205          266 ---PVFPPGIVDVHGILRYS  282 (286)
Q Consensus       266 ---~~~~~~~~~l~~~~~~s  282 (286)
                         ....|+.+++.+++..+
T Consensus       227 ~~~~~~tG~~i~v~~g~~~~  246 (251)
T 3orf_A          227 SDSRPTNGSLVKFETKSKVT  246 (251)
T ss_dssp             GGGCCCTTCEEEEEEETTEE
T ss_pred             ccccCCcceEEEEecCCccc
Confidence               45678999998776544

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=99.90  E-value=1e-22  Score=170.93  Aligned_cols=197  Identities=13%  Similarity=0.079  Sum_probs=144.8

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhc-------CCCEEEE
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD-------GVTAVIS  127 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d~vi~  127 (286)
                      +++++|||||+|+||++++++|+++|++|++++|+.++. ......++.++.+|++|.++++++++       ++|++||
T Consensus        15 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~-~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvn   93 (266)
T 3p19_A           15 MKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERL-KALNLPNTLCAQVDVTDKYTFDTAITRAEKIYGPADAIVN   93 (266)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHH-HTTCCTTEEEEECCTTCHHHHHHHHHHHHHHHCSEEEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHH-HHhhcCCceEEEecCCCHHHHHHHHHHHHHHCCCCCEEEE
Confidence            467899999999999999999999999999999986542 22233578999999999998888776       6899999


Q ss_pred             ccccCCC----------cchhhhhhhHHHHHHHHHH----HHcCCCEEEEEecCCcCCCCccccchHHHHHHHHHHHHH-
Q 023205          128 CVGGFGS----------NSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLT-  192 (286)
Q Consensus       128 ~a~~~~~----------~~~~~~~~~~~~~~l~~~a----~~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~~-  192 (286)
                      |||....          ....+++|+.++.++++++    ++.+..+||++||...-........|+.+|...+.+.+. 
T Consensus        94 nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~asK~a~~~~~~~l  173 (266)
T 3p19_A           94 NAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKKTFPDHAAYCGTKFAVHAISENV  173 (266)
T ss_dssp             CCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHH
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhCCCCCCCchHHHHHHHHHHHHHHH
Confidence            9997521          1245789999999877765    355677999999954333334567899999999986653 


Q ss_pred             -----hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcCCC
Q 023205          193 -----RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDPV  267 (286)
Q Consensus       193 -----~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~~  267 (286)
                           ..|+++++++||.+.++......  .    ......+....     .|     ...+++++|+|++++.++..+.
T Consensus       174 a~e~~~~gi~vn~v~PG~v~T~~~~~~~--~----~~~~~~~~~~~-----~~-----~~r~~~pedvA~av~~l~~~~~  237 (266)
T 3p19_A          174 REEVAASNVRVMTIAPSAVKTELLSHTT--S----QQIKDGYDAWR-----VD-----MGGVLAADDVARAVLFAYQQPQ  237 (266)
T ss_dssp             HHHHGGGTCEEEEEEECSBSSSGGGGCS--C----HHHHHHHHHHH-----HH-----TTCCBCHHHHHHHHHHHHHSCT
T ss_pred             HHHhcccCcEEEEEeeCccccchhhccc--c----hhhhHHHHhhc-----cc-----ccCCCCHHHHHHHHHHHHcCCC
Confidence                 46899999999999876432110  0    00011111100     11     1346899999999999998765


Q ss_pred             C
Q 023205          268 F  268 (286)
Q Consensus       268 ~  268 (286)
                      .
T Consensus       238 ~  238 (266)
T 3p19_A          238 N  238 (266)
T ss_dssp             T
T ss_pred             C
Confidence            3

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.90  E-value=1.9e-22  Score=171.07  Aligned_cols=224  Identities=12%  Similarity=0.045  Sum_probs=156.6

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCccc-----------c------cccCCceeEEeccCCCHhHH
Q 023205           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSL-----------R------DSWANNVIWHQGNLLSSDSW  115 (286)
Q Consensus        53 ~~~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~-----------~------~~~~~~~~~i~~Dl~d~~~~  115 (286)
                      ....++||||||+|+||++++++|+++|++|++++|+.....           .      .....++.++.+|++|++++
T Consensus         7 ~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   86 (287)
T 3pxx_A            7 RVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAV   86 (287)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHH
T ss_pred             ccCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHH
Confidence            344679999999999999999999999999999999732210           0      11235789999999999998


Q ss_pred             HHHhc-------CCCEEEEccccCCC--------cchhhhhhhHHHHHHHHHHHHcC--CCEEEEEecCC-cC-C-----
Q 023205          116 KEALD-------GVTAVISCVGGFGS--------NSYMYKINGTANINAIRAASEKG--VKRFVYISAAD-FG-V-----  171 (286)
Q Consensus       116 ~~~~~-------~~d~vi~~a~~~~~--------~~~~~~~~~~~~~~l~~~a~~~~--v~~~v~~Ss~~-~~-~-----  171 (286)
                      +++++       ++|++|||||....        ....+++|+.++.++++++....  ..+||++||.. +. .     
T Consensus        87 ~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  166 (287)
T 3pxx_A           87 SRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSVAGLIAAAQPPG  166 (287)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCHHHHHHHHCCC-
T ss_pred             HHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccchhccccccccc
Confidence            87775       78999999997532        23567899999999999997653  34899999942 11 0     


Q ss_pred             ----CCccccchHHHHHHHHHHHHH------hCCCcEEEEeeCeeecCCCCCcc----ccCccccCchHHHHHHhcccCC
Q 023205          172 ----ANYLLQGYYEGKRAAETELLT------RYPYGGVILRPGFIYGTRTVGGM----KLPLGVIGSPMEMVLQHAKPLS  237 (286)
Q Consensus       172 ----~~~~~~~y~~sK~~~E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~  237 (286)
                          .......|+.+|...+.+.+.      ..|+++++++||.+..+......    ..+........+.... .....
T Consensus       167 ~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~  245 (287)
T 3pxx_A          167 AGGPQGPGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMYRQFRPDLEAPSRADALLA-FPAMQ  245 (287)
T ss_dssp             ----CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCHHHHHHH-GGGGC
T ss_pred             ccccCCCccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccccccchhhhhccccccchhHHHHhh-hhhhc
Confidence                002346799999999987653      45899999999999877543210    0000000000000100 00111


Q ss_pred             CCCCCCCccCCCccHHHHHHHHHHHhcCC--CCCCCeeEecccccccc
Q 023205          238 QLPLVGPLFTPPVNVTVVAKVAVRAATDP--VFPPGIVDVHGILRYSQ  283 (286)
Q Consensus       238 ~~~~~g~~~~~~i~v~Dva~~~~~~l~~~--~~~~~~~~l~~~~~~s~  283 (286)
                      .+      ...+.+++|+|++++.++...  ...|+++++.|+..++|
T Consensus       246 ~~------~~~~~~p~dva~~v~fL~s~~a~~itG~~i~vdGG~~~~~  287 (287)
T 3pxx_A          246 AM------PTPYVEASDISNAVCFLASDESRYVTGLQFKVDAGAMLKF  287 (287)
T ss_dssp             SS------SCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGGC
T ss_pred             cc------CCCCCCHHHHHhhHheecchhhcCCCCceEeECchhhhcC
Confidence            11      145789999999999999643  35689999999987765

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=99.90  E-value=2e-22  Score=170.32  Aligned_cols=207  Identities=14%  Similarity=0.080  Sum_probs=150.1

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc-----cccCCceeEEeccCCCHhHHHHHhcC-------C
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALDG-------V  122 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~-----~~~~~~~~~i~~Dl~d~~~~~~~~~~-------~  122 (286)
                      ..++|+||||+|+||++++++|+++|++|++++|+.++...     .....++.++.+|++|.++++++++.       +
T Consensus        33 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i  112 (279)
T 3ctm_A           33 KGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKDFGTI  112 (279)
T ss_dssp             TTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            35789999999999999999999999999999998754211     11134788999999999998887764       8


Q ss_pred             CEEEEccccCCC------c------chhhhhhhHHH----HHHHHHHHHcCCCEEEEEecCCcCCC--CccccchHHHHH
Q 023205          123 TAVISCVGGFGS------N------SYMYKINGTAN----INAIRAASEKGVKRFVYISAADFGVA--NYLLQGYYEGKR  184 (286)
Q Consensus       123 d~vi~~a~~~~~------~------~~~~~~~~~~~----~~l~~~a~~~~v~~~v~~Ss~~~~~~--~~~~~~y~~sK~  184 (286)
                      |+||||||....      .      ...+++|+.++    .++++.+++.+.++||++||......  ..+...|+.+|.
T Consensus       113 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~Y~~sK~  192 (279)
T 3ctm_A          113 DVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNGKGSLIITSSISGKIVNIPQLQAPYNTAKA  192 (279)
T ss_dssp             SEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCCTTSCC---CCHHHHHHHHH
T ss_pred             CEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEECchHhccCCCCCCcccHHHHHH
Confidence            999999986532      1      23567899984    46666777777889999999532222  345678999999


Q ss_pred             HHHHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHH
Q 023205          185 AAETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKV  258 (286)
Q Consensus       185 ~~E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~  258 (286)
                      ..|.+++.      ..+ ++++++||.+.++.....   +    ......+..      ..|.     ..+++++|+|++
T Consensus       193 a~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~~~~~---~----~~~~~~~~~------~~p~-----~~~~~~~dvA~~  253 (279)
T 3ctm_A          193 ACTHLAKSLAIEWAPFA-RVNTISPGYIDTDITDFA---S----KDMKAKWWQ------LTPL-----GREGLTQELVGG  253 (279)
T ss_dssp             HHHHHHHHHHHHTTTTC-EEEEEEECSBSSTTTSSC---C----HHHHHHHHH------HSTT-----CSCBCGGGTHHH
T ss_pred             HHHHHHHHHHHHhcccC-CEEEEeccCCcccccccc---C----hHHHHHHHH------hCCc-----cCCcCHHHHHHH
Confidence            99997753      357 999999999987643210   0    011111111      1111     247899999999


Q ss_pred             HHHHhcCC--CCCCCeeEeccccc
Q 023205          259 AVRAATDP--VFPPGIVDVHGILR  280 (286)
Q Consensus       259 ~~~~l~~~--~~~~~~~~l~~~~~  280 (286)
                      ++.++..+  ...|+++++.|+..
T Consensus       254 ~~~l~s~~~~~~tG~~i~vdgG~~  277 (279)
T 3ctm_A          254 YLYLASNASTFTTGSDVVIDGGYT  277 (279)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTCC
T ss_pred             HHHHhCccccCccCCEEEECCCee
Confidence            99999763  35688999998754

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.90  E-value=9.5e-23  Score=172.41  Aligned_cols=217  Identities=12%  Similarity=0.076  Sum_probs=152.8

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc---c--ccCC---ceeEEeccCCCHhHHHHHhc------
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR---D--SWAN---NVIWHQGNLLSSDSWKEALD------  120 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~---~--~~~~---~~~~i~~Dl~d~~~~~~~~~------  120 (286)
                      ..++++||||+|+||++++++|+++|++|++++|+.++...   +  ....   ++.++.+|++|+++++++++      
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   84 (280)
T 1xkq_A            5 SNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQF   84 (280)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHHhc
Confidence            35789999999999999999999999999999998644211   1  0112   68999999999998887775      


Q ss_pred             -CCCEEEEccccCCC--------------cchhhhhhhHHHHHHHHHHHH----cCCCEEEEEecCCcCCCC-ccccchH
Q 023205          121 -GVTAVISCVGGFGS--------------NSYMYKINGTANINAIRAASE----KGVKRFVYISAADFGVAN-YLLQGYY  180 (286)
Q Consensus       121 -~~d~vi~~a~~~~~--------------~~~~~~~~~~~~~~l~~~a~~----~~v~~~v~~Ss~~~~~~~-~~~~~y~  180 (286)
                       ++|+||||||....              ....+++|+.++.++++++..    .+ .+||++||....... .....|+
T Consensus        85 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~~Y~  163 (280)
T 1xkq_A           85 GKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-GEIVNVSSIVAGPQAQPDFLYYA  163 (280)
T ss_dssp             SCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGSSSCCCSSHHHH
T ss_pred             CCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCC-CcEEEecCccccCCCCCcccHHH
Confidence             68999999986421              124568899999998888754    34 799999995332233 4567899


Q ss_pred             HHHHHHHHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHH
Q 023205          181 EGKRAAETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTV  254 (286)
Q Consensus       181 ~sK~~~E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D  254 (286)
                      .+|...+.+.+.      ..|+++++++||.+.++...... .+.. .+..........  ....|.     ..+.+++|
T Consensus       164 asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~-~~~~-~~~~~~~~~~~~--~~~~p~-----~~~~~ped  234 (280)
T 1xkq_A          164 IAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMG-MPDQ-ASQKFYNFMASH--KECIPI-----GAAGKPEH  234 (280)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTT-CCHH-HHHHHHHHHHHC--TTTCTT-----SSCBCHHH
T ss_pred             HHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCcccccc-cccc-cccchHHHHHHH--HcCCCC-----CCCCCHHH
Confidence            999999987653      46899999999999876421100 0000 000000011111  111222     34789999


Q ss_pred             HHHHHHHHhcCC---CCCCCeeEecccccc
Q 023205          255 VAKVAVRAATDP---VFPPGIVDVHGILRY  281 (286)
Q Consensus       255 va~~~~~~l~~~---~~~~~~~~l~~~~~~  281 (286)
                      +|++++.++..+   ...|+.+++.|+..+
T Consensus       235 vA~~v~~l~s~~~~~~~tG~~i~vdgG~~~  264 (280)
T 1xkq_A          235 IANIILFLADRNLSFYILGQSIVADGGTSL  264 (280)
T ss_dssp             HHHHHHHHHCHHHHTTCCSCEEEESTTGGG
T ss_pred             HHHHHHHhcCcccccCccCCeEEECCCccc
Confidence            999999998754   356899999987644

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=99.90  E-value=2.2e-22  Score=169.53  Aligned_cols=213  Identities=16%  Similarity=0.081  Sum_probs=149.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc---c--ccCCceeEEeccCCCHhHHHHHh--------cCC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR---D--SWANNVIWHQGNLLSSDSWKEAL--------DGV  122 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~---~--~~~~~~~~i~~Dl~d~~~~~~~~--------~~~  122 (286)
                      .++++||||+|+||++++++|+++|++|++++|+.++...   +  ....++.++.+|++|++++++++        .++
T Consensus        21 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~i  100 (273)
T 1ae1_A           21 GTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGKL  100 (273)
T ss_dssp             TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTSCC
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            5789999999999999999999999999999998643211   0  11347889999999999888776        468


Q ss_pred             CEEEEccccCCC----------cchhhhhhhHHHHHHHHHHH----HcCCCEEEEEecCCcCCCCccccchHHHHHHHHH
Q 023205          123 TAVISCVGGFGS----------NSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEGKRAAET  188 (286)
Q Consensus       123 d~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~----~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~  188 (286)
                      |++|||||....          ....+++|+.++.++++++.    +.+..+||++||............|+.+|...+.
T Consensus       101 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~  180 (273)
T 1ae1_A          101 NILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGAINQ  180 (273)
T ss_dssp             CEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCTTCHHHHHHHHHHHH
T ss_pred             cEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHhhcCCCCCcchhHHHHHHHHH
Confidence            999999986531          12456799999999988873    4556799999995332333456789999999998


Q ss_pred             HHHH------hCCCcEEEEeeCeeecCCCCCccc-cCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHH
Q 023205          189 ELLT------RYPYGGVILRPGFIYGTRTVGGMK-LPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVR  261 (286)
Q Consensus       189 ~~~~------~~g~~~~ilRp~~v~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~  261 (286)
                      +.+.      ..|+++++++||.+.++....... .+.  .....+.+..      ..|.     ..+.+++|+|++++.
T Consensus       181 ~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~--~~~~~~~~~~------~~p~-----~r~~~p~dvA~~v~~  247 (273)
T 1ae1_A          181 MTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPH--QKEEIDNFIV------KTPM-----GRAGKPQEVSALIAF  247 (273)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECSBC---------------CHHHHHHHHH------HSTT-----CSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHhhcCcEEEEEEeCCCcCchhhhhhhcccC--cHHHHHHHHh------cCCC-----CCCcCHHHHHHHHHH
Confidence            7653      358999999999998875322110 000  0001111111      1121     246899999999999


Q ss_pred             HhcCC--CCCCCeeEecccccc
Q 023205          262 AATDP--VFPPGIVDVHGILRY  281 (286)
Q Consensus       262 ~l~~~--~~~~~~~~l~~~~~~  281 (286)
                      ++..+  ...|+++++.|+..+
T Consensus       248 l~s~~~~~~tG~~i~vdGG~~~  269 (273)
T 1ae1_A          248 LCFPAASYITGQIIWADGGFTA  269 (273)
T ss_dssp             HHSGGGTTCCSCEEEESTTGGG
T ss_pred             HhCccccCcCCCEEEECCCccc
Confidence            98653  246899999988654

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=99.90  E-value=2.1e-22  Score=166.34  Aligned_cols=204  Identities=20%  Similarity=0.186  Sum_probs=146.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHh-------cCCCEEEEc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEAL-------DGVTAVISC  128 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~-------~~~d~vi~~  128 (286)
                      +|+++||||+|+||++++++|+++|++|++++|+.++...+.   ++.++.+|++| +++++++       .++|++|||
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~---~~~~~~~D~~~-~~~~~~~~~~~~~~g~id~lv~~   77 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEAAQSL---GAVPLPTDLEK-DDPKGLVKRALEALGGLHVLVHA   77 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHH---TCEEEECCTTT-SCHHHHHHHHHHHHTSCCEEEEC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhh---CcEEEecCCch-HHHHHHHHHHHHHcCCCCEEEEC
Confidence            478999999999999999999999999999999876522111   37889999999 7666554       378999999


Q ss_pred             cccCCC----------cchhhhhhhHHHHHHHHHHH----HcCCCEEEEEecCCcCCCC--ccccchHHHHHHHHHHHHH
Q 023205          129 VGGFGS----------NSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVAN--YLLQGYYEGKRAAETELLT  192 (286)
Q Consensus       129 a~~~~~----------~~~~~~~~~~~~~~l~~~a~----~~~v~~~v~~Ss~~~~~~~--~~~~~y~~sK~~~E~~~~~  192 (286)
                      ||....          ....+++|+.++.++++++.    +.+.++||++||.......  .+...|+.+|...|.+.+.
T Consensus        78 Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~Y~~sK~a~~~~~~~  157 (239)
T 2ekp_A           78 AAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFTAGGPVPIPAYTTAKTALLGLTRA  157 (239)
T ss_dssp             CCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTSCCHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhccCCCCCCCccHHHHHHHHHHHHHH
Confidence            986421          13566899999988888773    4567899999995322222  4567899999999987653


Q ss_pred             ------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcCC
Q 023205          193 ------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDP  266 (286)
Q Consensus       193 ------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~  266 (286)
                            ..|++++++|||.+.++......       .. .+......   ...|.     ..+.+++|+|++++.++..+
T Consensus       158 la~e~~~~gi~v~~v~Pg~v~t~~~~~~~-------~~-~~~~~~~~---~~~p~-----~~~~~~~dvA~~~~~l~s~~  221 (239)
T 2ekp_A          158 LAKEWARLGIRVNLLCPGYVETEFTLPLR-------QN-PELYEPIT---ARIPM-----GRWARPEEIARVAAVLCGDE  221 (239)
T ss_dssp             HHHHHGGGTEEEEEEEECSBCSGGGHHHH-------TC-HHHHHHHH---TTCTT-----SSCBCHHHHHHHHHHHTSGG
T ss_pred             HHHHhhhcCcEEEEEEeCCccCchhhccc-------cC-HHHHHHHH---hcCCC-----CCCcCHHHHHHHHHHHcCch
Confidence                  35899999999999876421100       00 01111111   11222     24689999999999998753


Q ss_pred             --CCCCCeeEecccc
Q 023205          267 --VFPPGIVDVHGIL  279 (286)
Q Consensus       267 --~~~~~~~~l~~~~  279 (286)
                        ...|+.+++.|+.
T Consensus       222 ~~~~tG~~~~vdgG~  236 (239)
T 2ekp_A          222 AEYLTGQAVAVDGGF  236 (239)
T ss_dssp             GTTCCSCEEEESTTT
T ss_pred             hcCCCCCEEEECCCc
Confidence              2468899998874

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=99.90  E-value=8.3e-23  Score=172.73  Aligned_cols=211  Identities=14%  Similarity=0.135  Sum_probs=144.5

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc------cccCCceeEEeccCCCHhHHHHHhc-------
Q 023205           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD-------  120 (286)
Q Consensus        54 ~~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~------~~~~~~~~~i~~Dl~d~~~~~~~~~-------  120 (286)
                      ...++++||||+|+||++++++|+++|++|++++|+..+...      .....++.++++|++|+++++++++       
T Consensus        27 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  106 (280)
T 4da9_A           27 KARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAEFG  106 (280)
T ss_dssp             CCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHHHS
T ss_pred             cCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            346789999999999999999999999999999975433211      1123578999999999998888776       


Q ss_pred             CCCEEEEccccCC------------CcchhhhhhhHHHHHHHHHHHHc----C---CCEEEEEecCCcCCCCccccchHH
Q 023205          121 GVTAVISCVGGFG------------SNSYMYKINGTANINAIRAASEK----G---VKRFVYISAADFGVANYLLQGYYE  181 (286)
Q Consensus       121 ~~d~vi~~a~~~~------------~~~~~~~~~~~~~~~l~~~a~~~----~---v~~~v~~Ss~~~~~~~~~~~~y~~  181 (286)
                      ++|++|||||...            .+...+++|+.++.++++++...    +   ..+||++||............|+.
T Consensus       107 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~a  186 (280)
T 4da9_A          107 RIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMTSPERLDYCM  186 (280)
T ss_dssp             CCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC-------CCHHHHH
T ss_pred             CCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhccCCCCccHHHH
Confidence            7899999998731            12356789999999888877542    2   358999999543333345678999


Q ss_pred             HHHHHHHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHH
Q 023205          182 GKRAAETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVV  255 (286)
Q Consensus       182 sK~~~E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dv  255 (286)
                      +|...+.+.+.      ..|+++++++||.+..+......       ..    ...... ....|     ...+.+++|+
T Consensus       187 sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~-------~~----~~~~~~-~~~~p-----~~r~~~pedv  249 (280)
T 4da9_A          187 SKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTAAVS-------GK----YDGLIE-SGLVP-----MRRWGEPEDI  249 (280)
T ss_dssp             HHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC---------------------------------------CCBCHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchhhcc-------hh----HHHHHh-hcCCC-----cCCcCCHHHH
Confidence            99999987653      46899999999999876432110       00    000000 00112     2356899999


Q ss_pred             HHHHHHHhcCCC--CCCCeeEecccccc
Q 023205          256 AKVAVRAATDPV--FPPGIVDVHGILRY  281 (286)
Q Consensus       256 a~~~~~~l~~~~--~~~~~~~l~~~~~~  281 (286)
                      |++++.++....  ..|+++++.|+..+
T Consensus       250 A~~v~~L~s~~~~~itG~~i~vdGG~~~  277 (280)
T 4da9_A          250 GNIVAGLAGGQFGFATGSVIQADGGLSI  277 (280)
T ss_dssp             HHHHHHHHTSTTGGGTTCEEEESTTCC-
T ss_pred             HHHHHHHhCccccCCCCCEEEECCCccc
Confidence            999999997654  46899999998654

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=99.90  E-value=1.3e-22  Score=169.46  Aligned_cols=218  Identities=17%  Similarity=0.109  Sum_probs=151.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCc--ccc---c--ccCCceeEEeccCCCHhHHHHHhc-------C
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRS--SLR---D--SWANNVIWHQGNLLSSDSWKEALD-------G  121 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~--~~~---~--~~~~~~~~i~~Dl~d~~~~~~~~~-------~  121 (286)
                      .++++||||+|+||++++++|+++|++|++++|+.++  ...   +  ....++.++.+|++|+++++++++       +
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   81 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLGG   81 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHTC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            4789999999999999999999999999999998654  111   0  113478899999999998888775       7


Q ss_pred             CCEEEEccccCCC----------cchhhhhhhHHHHHHHHHHHH----cCC-CEEEEEecCCcCCCCccccchHHHHHHH
Q 023205          122 VTAVISCVGGFGS----------NSYMYKINGTANINAIRAASE----KGV-KRFVYISAADFGVANYLLQGYYEGKRAA  186 (286)
Q Consensus       122 ~d~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~~----~~v-~~~v~~Ss~~~~~~~~~~~~y~~sK~~~  186 (286)
                      +|++|||||....          ....+++|+.++.++++++..    .+. .+||++||...-........|+.+|...
T Consensus        82 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~  161 (258)
T 3a28_C           82 FDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQGFPILSAYSTTKFAV  161 (258)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGTSCCTTCHHHHHHHHHH
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhccCCCCchhHHHHHHHH
Confidence            8999999996532          134678999999988888764    355 7999999953222334567899999999


Q ss_pred             HHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccc-cCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHH
Q 023205          187 ETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGV-IGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVA  259 (286)
Q Consensus       187 E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~  259 (286)
                      |.+.+.      ..|+++++++||.+..+............ -....+......   ...|.     ..+.+++|+|+++
T Consensus       162 ~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~p~-----~r~~~p~dvA~~v  233 (258)
T 3a28_C          162 RGLTQAAAQELAPKGHTVNAYAPGIVGTGMWEQIDAELSKINGKPIGENFKEYS---SSIAL-----GRPSVPEDVAGLV  233 (258)
T ss_dssp             HHHHHHHHHHHGGGTCEEEEEEECCBCSHHHHHHHHHHHHHHCCCTTHHHHHHH---TTCTT-----SSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHhhCeEEEEEECCccCChhhhhhhhhhccccCCchHHHHHHHH---hcCCC-----CCccCHHHHHHHH
Confidence            987653      46899999999999754211000000000 000000000110   11121     2478999999999


Q ss_pred             HHHhcCC--CCCCCeeEecccccc
Q 023205          260 VRAATDP--VFPPGIVDVHGILRY  281 (286)
Q Consensus       260 ~~~l~~~--~~~~~~~~l~~~~~~  281 (286)
                      +.++..+  ...|+.+++.|+..+
T Consensus       234 ~~l~s~~~~~~tG~~i~vdGG~~~  257 (258)
T 3a28_C          234 SFLASENSNYVTGQVMLVDGGMLY  257 (258)
T ss_dssp             HHHHSGGGTTCCSCEEEESSSSCC
T ss_pred             HHHhCcccCCCCCCEEEECCCEec
Confidence            9999754  346889999987543

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=99.90  E-value=2.4e-22  Score=170.15  Aligned_cols=215  Identities=16%  Similarity=0.092  Sum_probs=154.4

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc-----cccCCceeEEeccCCCHhHHHHHhc-------CC
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------GV  122 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~-----~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~  122 (286)
                      ..++++||||+|+||++++++|+++|++|++++|+.++...     .....++.++++|++|+++++++++       ++
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  106 (283)
T 3v8b_A           27 PSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLKFGHL  106 (283)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            35789999999999999999999999999999998654211     1123578899999999998887775       68


Q ss_pred             CEEEEccccCCC-----------cchhhhhhhHHHHHHHHHH----HHcCCCEEEEEecCCcCC--CCccccchHHHHHH
Q 023205          123 TAVISCVGGFGS-----------NSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGV--ANYLLQGYYEGKRA  185 (286)
Q Consensus       123 d~vi~~a~~~~~-----------~~~~~~~~~~~~~~l~~~a----~~~~v~~~v~~Ss~~~~~--~~~~~~~y~~sK~~  185 (286)
                      |++|||||....           ....+++|+.++.++++++    ++.+..+||++||.....  .......|+.+|..
T Consensus       107 D~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~~~Y~asKaa  186 (283)
T 3v8b_A          107 DIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRTFTTPGATAYTATKAA  186 (283)
T ss_dssp             CEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCSTTCHHHHHHHHH
T ss_pred             CEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCceEEEEcChhhccCCCCCCchHHHHHHHH
Confidence            999999996421           1356789999999998887    555667999999953222  33456789999999


Q ss_pred             HHHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHH--hcccCCCCCCCCCccCCCccHHHHHH
Q 023205          186 AETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQ--HAKPLSQLPLVGPLFTPPVNVTVVAK  257 (286)
Q Consensus       186 ~E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~g~~~~~~i~v~Dva~  257 (286)
                      .+.+.+.      ..|+++++|+||.+..+........+        .....  .......+|..   ...+..++|+|+
T Consensus       187 ~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~--------~~~~~~~~~~~~~~~p~~---~~r~~~pedvA~  255 (283)
T 3v8b_A          187 QVAIVQQLALELGKHHIRVNAVCPGAIETNISDNTKLRH--------EEETAIPVEWPKGQVPIT---DGQPGRSEDVAE  255 (283)
T ss_dssp             HHHHHHHHHHHTTTTTEEEEEEEECSBSSCTTCCTTBCC--------HHHHSCCCBCTTCSCGGG---TTCCBCHHHHHH
T ss_pred             HHHHHHHHHHHhCccCcEEEEEEeCCCcCCccccccccc--------chhhhhhhhhhhhcCccc---cCCCCCHHHHHH
Confidence            9987753      46899999999999876543211000        00000  00001111110   134678999999


Q ss_pred             HHHHHhcCC--CCCCCeeEeccccc
Q 023205          258 VAVRAATDP--VFPPGIVDVHGILR  280 (286)
Q Consensus       258 ~~~~~l~~~--~~~~~~~~l~~~~~  280 (286)
                      +++.++...  ...|+++++.|+..
T Consensus       256 ~v~fL~s~~a~~itG~~i~vdGG~~  280 (283)
T 3v8b_A          256 LIRFLVSERARHVTGSPVWIDGGQG  280 (283)
T ss_dssp             HHHHHTSGGGTTCCSCEEEESTTHH
T ss_pred             HHHHHcCccccCCcCCEEEECcCcc
Confidence            999998753  34689999998754

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=99.90  E-value=1.3e-22  Score=168.40  Aligned_cols=208  Identities=14%  Similarity=0.070  Sum_probs=153.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc-----cccCCceeEEeccCCCHhHHHHHhc-------CCC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------GVT  123 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~-----~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d  123 (286)
                      .++++||||+|+||++++++|+++|++|++++|+.++...     .....++.++.+|++|+++++++++       .+|
T Consensus         5 ~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   84 (247)
T 3lyl_A            5 EKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENLAID   84 (247)
T ss_dssp             TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTCCCS
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            5789999999999999999999999999999998654211     1123578999999999998888775       479


Q ss_pred             EEEEccccCCC----------cchhhhhhhHHHHHHHHHHHH----cCCCEEEEEecCCcCCCCccccchHHHHHHHHHH
Q 023205          124 AVISCVGGFGS----------NSYMYKINGTANINAIRAASE----KGVKRFVYISAADFGVANYLLQGYYEGKRAAETE  189 (286)
Q Consensus       124 ~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~~----~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~  189 (286)
                      +||||||....          ....+++|+.++.++++++..    .+..+||++||............|+.+|...+.+
T Consensus        85 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~  164 (247)
T 3lyl_A           85 ILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSAGNPGQTNYCAAKAGVIGF  164 (247)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCCCcHHHHHHHHHHHHH
Confidence            99999997532          135678999999988887643    4556999999953222334567899999988886


Q ss_pred             HHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHh
Q 023205          190 LLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAA  263 (286)
Q Consensus       190 ~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l  263 (286)
                      .+.      ..|+++++++||.+..+.....        .   ........  ...|     ...+.+++|+|++++.++
T Consensus       165 ~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~--------~---~~~~~~~~--~~~~-----~~~~~~~~dva~~i~~l~  226 (247)
T 3lyl_A          165 SKSLAYEVASRNITVNVVAPGFIATDMTDKL--------T---DEQKSFIA--TKIP-----SGQIGEPKDIAAAVAFLA  226 (247)
T ss_dssp             HHHHHHHHGGGTEEEEEEEECSBCCTTTTTS--------C---HHHHHHHH--TTST-----TCCCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCeEEEEEeeCcEecccchhc--------c---HHHHHHHh--hcCC-----CCCCcCHHHHHHHHHHHh
Confidence            653      4689999999999987653221        0   11111111  1111     235789999999999999


Q ss_pred             cCC--CCCCCeeEecccccc
Q 023205          264 TDP--VFPPGIVDVHGILRY  281 (286)
Q Consensus       264 ~~~--~~~~~~~~l~~~~~~  281 (286)
                      ..+  ...|+++++.|+..+
T Consensus       227 s~~~~~~tG~~i~vdgG~~~  246 (247)
T 3lyl_A          227 SEEAKYITGQTLHVNGGMYM  246 (247)
T ss_dssp             SGGGTTCCSCEEEESTTSSC
T ss_pred             CCCcCCccCCEEEECCCEec
Confidence            653  346899999987654

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=99.90  E-value=7.9e-23  Score=172.61  Aligned_cols=217  Identities=18%  Similarity=0.128  Sum_probs=157.8

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc------cccCCceeEEeccCCCHhHHHHHhc-------
Q 023205           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD-------  120 (286)
Q Consensus        54 ~~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~------~~~~~~~~~i~~Dl~d~~~~~~~~~-------  120 (286)
                      ...++++||||+|+||++++++|+++|++|++++|+.++...      .....++.++.+|++|+++++++++       
T Consensus        25 l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g  104 (277)
T 4fc7_A           25 LRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKEFG  104 (277)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            346799999999999999999999999999999998654211      1124578999999999998887775       


Q ss_pred             CCCEEEEccccCCC----------cchhhhhhhHHHHHHHHHHHH----cCCCEEEEEecCCcCCCCccccchHHHHHHH
Q 023205          121 GVTAVISCVGGFGS----------NSYMYKINGTANINAIRAASE----KGVKRFVYISAADFGVANYLLQGYYEGKRAA  186 (286)
Q Consensus       121 ~~d~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~~----~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~  186 (286)
                      .+|++|||||....          ....+++|+.++.++++++..    .+..+||++||............|+.+|...
T Consensus       105 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~  184 (277)
T 4fc7_A          105 RIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNRGQALQVHAGSAKAAV  184 (277)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCSHHHHTCTTCHHHHHHHHHH
T ss_pred             CCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCCCcHHHHHHHHHH
Confidence            68999999985421          235678999999999988743    3446999999953222334457899999999


Q ss_pred             HHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHH
Q 023205          187 ETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAV  260 (286)
Q Consensus       187 E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~  260 (286)
                      +.+.+.      ..|+++++++||.+.++......       ............   ..|.     ..+.+++|+|++++
T Consensus       185 ~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~-------~~~~~~~~~~~~---~~p~-----~r~~~p~dvA~~v~  249 (277)
T 4fc7_A          185 DAMTRHLAVEWGPQNIRVNSLAPGPISGTEGLRRL-------GGPQASLSTKVT---ASPL-----QRLGNKTEIAHSVL  249 (277)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECCBSSSHHHHHH-------SCCHHHHHHHHH---TSTT-----SSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHhhhcCeEEEEEEECCEecchhhhhc-------cCCHHHHHHHhc---cCCC-----CCCcCHHHHHHHHH
Confidence            987653      46899999999999875321000       000111111111   1122     34679999999999


Q ss_pred             HHhcCC--CCCCCeeEecccccccccC
Q 023205          261 RAATDP--VFPPGIVDVHGILRYSQKS  285 (286)
Q Consensus       261 ~~l~~~--~~~~~~~~l~~~~~~s~~~  285 (286)
                      .++...  ...|+++++.|+..++++.
T Consensus       250 fL~s~~~~~itG~~i~vdGG~~~~~~e  276 (277)
T 4fc7_A          250 YLASPLASYVTGAVLVADGGAWLTFPN  276 (277)
T ss_dssp             HHHSGGGTTCCSCEEEESTTHHHHCCC
T ss_pred             HHcCCccCCcCCCEEEECCCcccCCCC
Confidence            999753  3568999999998887754

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=99.90  E-value=3.8e-22  Score=167.40  Aligned_cols=209  Identities=17%  Similarity=0.043  Sum_probs=150.3

Q ss_pred             CCCCeEEEEcCCC-hhHHHHHHHHHHCCCeEEEEecCCCcccc------cccCCceeEEeccCCCHhHHHHHhc------
Q 023205           54 PPSEKLLVLGGNG-FVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD------  120 (286)
Q Consensus        54 ~~~~~VlVtGatG-~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~------~~~~~~~~~i~~Dl~d~~~~~~~~~------  120 (286)
                      ...++|+||||+| .||++++++|+++|++|++++|+.++...      .....++.++.+|++|+++++++++      
T Consensus        20 l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   99 (266)
T 3o38_A           20 LKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEKA   99 (266)
T ss_dssp             TTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHHHh
Confidence            3467999999998 69999999999999999999998654211      1123589999999999999888775      


Q ss_pred             -CCCEEEEccccCCC----------cchhhhhhhHHHHHHHHHHHHc-----CCCEEEEEecCCcCCCCccccchHHHHH
Q 023205          121 -GVTAVISCVGGFGS----------NSYMYKINGTANINAIRAASEK-----GVKRFVYISAADFGVANYLLQGYYEGKR  184 (286)
Q Consensus       121 -~~d~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~~~-----~v~~~v~~Ss~~~~~~~~~~~~y~~sK~  184 (286)
                       .+|+||||||....          ....+++|+.++.++++++...     +..+||++||........+...|+.+|.
T Consensus       100 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sKa  179 (266)
T 3o38_A          100 GRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQHSQSHYAAAKA  179 (266)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTCCCTTCHHHHHHHH
T ss_pred             CCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcCCCCCCchHHHHHH
Confidence             57999999996532          1346789999999998887653     4468999999543333445678999999


Q ss_pred             HHHHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHH
Q 023205          185 AAETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKV  258 (286)
Q Consensus       185 ~~E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~  258 (286)
                      ..+.+.+.      ..|+++++++||.+..+......          .........  ..     .....+.+++|+|++
T Consensus       180 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~----------~~~~~~~~~--~~-----~~~~r~~~~~dva~~  242 (266)
T 3o38_A          180 GVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEKTS----------SSELLDRLA--SD-----EAFGRAAEPWEVAAT  242 (266)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECCCCC-----------------------------C-----CTTSSCCCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHcCcEEEEEeCCcccchhhhccC----------cHHHHHHHH--hc-----CCcCCCCCHHHHHHH
Confidence            99987753      46899999999999866432110          000000000  01     113457899999999


Q ss_pred             HHHHhcCC--CCCCCeeEecccc
Q 023205          259 AVRAATDP--VFPPGIVDVHGIL  279 (286)
Q Consensus       259 ~~~~l~~~--~~~~~~~~l~~~~  279 (286)
                      ++.++..+  ...|+++++.|+.
T Consensus       243 i~~l~s~~~~~~tG~~i~vdgG~  265 (266)
T 3o38_A          243 IAFLASDYSSYMTGEVVSVSSQR  265 (266)
T ss_dssp             HHHHHSGGGTTCCSCEEEESSCC
T ss_pred             HHHHcCccccCccCCEEEEcCCc
Confidence            99999753  3568999998863

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=99.90  E-value=2e-22  Score=168.24  Aligned_cols=217  Identities=18%  Similarity=0.100  Sum_probs=150.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc---c--ccCCceeEEeccCCCHhHHHHHhc-------CCC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR---D--SWANNVIWHQGNLLSSDSWKEALD-------GVT  123 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~---~--~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d  123 (286)
                      +++++||||+|+||++++++|+++|++|++++|+.++...   +  ....++.++.+|++|+++++++++       ++|
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id   81 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFD   81 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence            5789999999999999999999999999999998643211   1  113468899999999999888876       799


Q ss_pred             EEEEccccCCC----------cchhhhhhhHHHHHHHHHHHH----cC-CCEEEEEecCCcCCCCccccchHHHHHHHHH
Q 023205          124 AVISCVGGFGS----------NSYMYKINGTANINAIRAASE----KG-VKRFVYISAADFGVANYLLQGYYEGKRAAET  188 (286)
Q Consensus       124 ~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~~----~~-v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~  188 (286)
                      +||||||....          ....+++|+.++.++++++..    .+ ..+||++||............|+.+|...+.
T Consensus        82 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~  161 (256)
T 1geg_A           82 VIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRG  161 (256)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCCCchhHHHHHHHHHH
Confidence            99999986431          124678999999888777653    34 5699999995322223345689999999998


Q ss_pred             HHHH------hCCCcEEEEeeCeeecCCCCCccccCccccC-chHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHH
Q 023205          189 ELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIG-SPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVR  261 (286)
Q Consensus       189 ~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~  261 (286)
                      +.+.      ..|+++++++||.+.++.............+ ..........   ...|.     ..+.+++|+|++++.
T Consensus       162 ~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~p~-----~r~~~p~dvA~~v~~  233 (256)
T 1geg_A          162 LTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFA---KRITL-----GRLSEPEDVAACVSY  233 (256)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHH---TTCTT-----CSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcCeEEEEEEECCCccchhhhhhhhccccccCChHHHHHHHH---hcCCC-----CCCcCHHHHHHHHHH
Confidence            7653      4689999999999976531100000000000 0000000000   11121     247899999999999


Q ss_pred             HhcCC--CCCCCeeEeccccc
Q 023205          262 AATDP--VFPPGIVDVHGILR  280 (286)
Q Consensus       262 ~l~~~--~~~~~~~~l~~~~~  280 (286)
                      ++..+  ...|+.+.+.|+..
T Consensus       234 l~s~~~~~~tG~~i~vdGG~~  254 (256)
T 1geg_A          234 LASPDSDYMTGQSLLIDGGMV  254 (256)
T ss_dssp             HHSGGGTTCCSCEEEESSSSS
T ss_pred             HhCccccCCCCCEEEeCCCcc
Confidence            99754  34689999988754

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=99.90  E-value=7.4e-22  Score=166.10  Aligned_cols=206  Identities=16%  Similarity=0.116  Sum_probs=153.2

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc------cccCCceeEEeccCCCHhHHHHHhc-------C
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD-------G  121 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~------~~~~~~~~~i~~Dl~d~~~~~~~~~-------~  121 (286)
                      ..++++||||+|+||++++++|+++|++|+++.|+..+...      .....++.++.+|++|+++++++++       +
T Consensus        30 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  109 (271)
T 3v2g_A           30 AGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEALGG  109 (271)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            46799999999999999999999999999999877533211      1124578899999999999888776       7


Q ss_pred             CCEEEEccccCCC----------cchhhhhhhHHHHHHHHHHHHc--CCCEEEEEecCCcCCC-CccccchHHHHHHHHH
Q 023205          122 VTAVISCVGGFGS----------NSYMYKINGTANINAIRAASEK--GVKRFVYISAADFGVA-NYLLQGYYEGKRAAET  188 (286)
Q Consensus       122 ~d~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~~~--~v~~~v~~Ss~~~~~~-~~~~~~y~~sK~~~E~  188 (286)
                      +|++|||||....          ....+++|+.++.++++++...  ...+||++||...... ......|+.+|...+.
T Consensus       110 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~~  189 (271)
T 3v2g_A          110 LDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSNLAELVPWPGISLYSASKAALAG  189 (271)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCGGGTCCCSTTCHHHHHHHHHHHH
T ss_pred             CcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeChhhccCCCCCchHHHHHHHHHHH
Confidence            8999999997532          2356789999999999998765  3458999998532222 3456789999999998


Q ss_pred             HHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHH
Q 023205          189 ELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRA  262 (286)
Q Consensus       189 ~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~  262 (286)
                      +.+.      ..|+++++++||.+.++.....        ....+.+...      +|.     ..+..++|+|++++.+
T Consensus       190 l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~--------~~~~~~~~~~------~~~-----~r~~~pedvA~~v~fL  250 (271)
T 3v2g_A          190 LTKGLARDLGPRGITVNIVHPGSTDTDMNPAD--------GDHAEAQRER------IAT-----GSYGEPQDIAGLVAWL  250 (271)
T ss_dssp             HHHHHHHHHGGGTCEEEEEEECSBCSSSSCSS--------CSSHHHHHHT------CTT-----SSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHhhhhCeEEEEEecCCCcCCccccc--------chhHHHHHhc------CCC-----CCCCCHHHHHHHHHHH
Confidence            7653      4689999999999987654321        1112222211      121     2467899999999999


Q ss_pred             hcCC--CCCCCeeEecccc
Q 023205          263 ATDP--VFPPGIVDVHGIL  279 (286)
Q Consensus       263 l~~~--~~~~~~~~l~~~~  279 (286)
                      +...  ...|+++++.|+.
T Consensus       251 ~s~~~~~itG~~i~vdGG~  269 (271)
T 3v2g_A          251 AGPQGKFVTGASLTIDGGA  269 (271)
T ss_dssp             HSGGGTTCCSCEEEESTTT
T ss_pred             hCcccCCccCCEEEeCcCc
Confidence            8643  3568999998864

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=99.90  E-value=2.6e-23  Score=173.29  Aligned_cols=208  Identities=15%  Similarity=0.108  Sum_probs=128.6

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc-----cccCCceeEEeccCCCHhHHHHHhc-------CC
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------GV  122 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~-----~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~  122 (286)
                      ..++||||||+|+||++++++|+++|++|++++|+.++...     .....++.++.+|++|+++++++++       ++
T Consensus         8 ~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   87 (253)
T 3qiv_A            8 ENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAEFGGI   87 (253)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            36789999999999999999999999999999998654211     1124578899999999999888776       78


Q ss_pred             CEEEEccccCC-------------CcchhhhhhhHHHHHHHHHH----HHcCCCEEEEEecCCcCCCCccccchHHHHHH
Q 023205          123 TAVISCVGGFG-------------SNSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKRA  185 (286)
Q Consensus       123 d~vi~~a~~~~-------------~~~~~~~~~~~~~~~l~~~a----~~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~  185 (286)
                      |+||||||...             .....+++|+.++.++.+++    ++.+..+||++||....   .+...|+.+|..
T Consensus        88 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~---~~~~~Y~asK~a  164 (253)
T 3qiv_A           88 DYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAW---LYSNYYGLAKVG  164 (253)
T ss_dssp             CEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC--------------CCHHH
T ss_pred             CEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEECCcccc---CCCchhHHHHHH
Confidence            99999998731             11356789999977666655    44566799999995321   345679999999


Q ss_pred             HHHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHH
Q 023205          186 AETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVA  259 (286)
Q Consensus       186 ~E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~  259 (286)
                      .|.+.+.      ..|+++++++||.+.++......  +    .   + +.....  ...|     ...+.+++|+|+++
T Consensus       165 ~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~--~----~---~-~~~~~~--~~~~-----~~~~~~~~dva~~~  227 (253)
T 3qiv_A          165 INGLTQQLSRELGGRNIRINAIAPGPIDTEANRTTT--P----K---E-MVDDIV--KGLP-----LSRMGTPDDLVGMC  227 (253)
T ss_dssp             HHHHHHHHHHHTTTTTEEEEEEEC------------------------------------------------CCHHHHHH
T ss_pred             HHHHHHHHHHHHhhcCeEEEEEEecCCcccchhhcC--c----H---H-HHHHHh--ccCC-----CCCCCCHHHHHHHH
Confidence            9987653      35899999999999887542110  0    0   0 000000  1111     22456789999999


Q ss_pred             HHHhcCCC--CCCCeeEeccccccc
Q 023205          260 VRAATDPV--FPPGIVDVHGILRYS  282 (286)
Q Consensus       260 ~~~l~~~~--~~~~~~~l~~~~~~s  282 (286)
                      +.++..+.  ..|++|++.|+..++
T Consensus       228 ~~l~s~~~~~~tG~~~~vdgG~~~~  252 (253)
T 3qiv_A          228 LFLLSDEASWITGQIFNVDGGQIIR  252 (253)
T ss_dssp             HHHHSGGGTTCCSCEEEC-------
T ss_pred             HHHcCccccCCCCCEEEECCCeecC
Confidence            99996543  468999999987765

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=99.90  E-value=4.5e-23  Score=170.92  Aligned_cols=214  Identities=15%  Similarity=0.173  Sum_probs=152.3

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHH-CCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhc-----CCCEEEEc
Q 023205           55 PSEKLLVLGGNGFVGSHICREALD-RGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD-----GVTAVISC  128 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~-~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~-----~~d~vi~~  128 (286)
                      .++++|||||+|+||++++++|++ .|++|+++.|+....     ...+.++.+|++|+++++++++     ++|++|||
T Consensus         3 ~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~~~id~lv~n   77 (244)
T 4e4y_A            3 AMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFS-----AENLKFIKADLTKQQDITNVLDIIKNVSFDGIFLN   77 (244)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCC-----CTTEEEEECCTTCHHHHHHHHHHTTTCCEEEEEEC
T ss_pred             CCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEeccccccc-----cccceEEecCcCCHHHHHHHHHHHHhCCCCEEEEC
Confidence            367899999999999999999999 788999999886522     3467999999999999998876     68999999


Q ss_pred             cccCCC----------cchhhhhhhHHHHHHHHHHHHcCC--CEEEEEecCCcCCCCccccchHHHHHHHHHHHHH----
Q 023205          129 VGGFGS----------NSYMYKINGTANINAIRAASEKGV--KRFVYISAADFGVANYLLQGYYEGKRAAETELLT----  192 (286)
Q Consensus       129 a~~~~~----------~~~~~~~~~~~~~~l~~~a~~~~v--~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~~----  192 (286)
                      ||....          ....+++|+.++.++++++.....  .+||++||............|+.+|...+.+.+.    
T Consensus        78 Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e  157 (244)
T 4e4y_A           78 AGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNGSDQCFIAKPNSFAYTLSKGAIAQMTKSLALD  157 (244)
T ss_dssp             CCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEECCGGGTCCCTTBHHHHHHHHHHHHHHHHHHHH
T ss_pred             CccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEECCHHHccCCCCCchhHHHHHHHHHHHHHHHHH
Confidence            997531          135678999999999999876533  3899999964333344567899999999987753    


Q ss_pred             --hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcCCC--C
Q 023205          193 --RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDPV--F  268 (286)
Q Consensus       193 --~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~~--~  268 (286)
                        ..|+++++++||.+.++.............+...........  ...|     ...+.+++|+|++++.++..+.  .
T Consensus       158 ~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~p-----~~r~~~p~dvA~~v~~l~s~~~~~i  230 (244)
T 4e4y_A          158 LAKYQIRVNTVCPGTVDTDLYRNLIQKYANNVGISFDEAQKQEE--KEFP-----LNRIAQPQEIAELVIFLLSDKSKFM  230 (244)
T ss_dssp             HGGGTCEEEEEEESCBCCHHHHHHHHHHHHHHTCCHHHHHHHHH--TTST-----TSSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHcCeEEEEEecCccCchhhHHHHHhhhhhcCCCHHHHHHHHh--hcCC-----CCCCcCHHHHHHHHHHHhcCccccc
Confidence              468999999999997653211000000000000000111111  1122     2357899999999999997543  4


Q ss_pred             CCCeeEeccccc
Q 023205          269 PPGIVDVHGILR  280 (286)
Q Consensus       269 ~~~~~~l~~~~~  280 (286)
                      .|+.+++.|+..
T Consensus       231 tG~~i~vdGG~~  242 (244)
T 4e4y_A          231 TGGLIPIDGGYT  242 (244)
T ss_dssp             CSCEEEESTTGG
T ss_pred             cCCeEeECCCcc
Confidence            689999998754

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=99.90  E-value=8.2e-23  Score=172.42  Aligned_cols=216  Identities=14%  Similarity=0.054  Sum_probs=154.2

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc--cccCCceeEEeccCCCHhHHHHHhc-------CCCEE
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSWANNVIWHQGNLLSSDSWKEALD-------GVTAV  125 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~--~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d~v  125 (286)
                      ..++++||||+|+||++++++|+++|++|++++|+.++...  .....++.++.+|++|+++++++++       ++|++
T Consensus        28 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l  107 (277)
T 3gvc_A           28 AGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCGAAACRVDVSDEQQIIAMVDACVAAFGGVDKL  107 (277)
T ss_dssp             TTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCSSCEEEECCTTCHHHHHHHHHHHHHHHSSCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCcceEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            46789999999999999999999999999999998654211  1224578999999999998887765       68999


Q ss_pred             EEccccCCC----------cchhhhhhhHHHHHHHHHHHH----cCCCEEEEEecCCcCCCCccccchHHHHHHHHHHHH
Q 023205          126 ISCVGGFGS----------NSYMYKINGTANINAIRAASE----KGVKRFVYISAADFGVANYLLQGYYEGKRAAETELL  191 (286)
Q Consensus       126 i~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~~----~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~  191 (286)
                      |||||....          ....+++|+.++.++++++..    .+..+||++||............|+.+|...+.+.+
T Consensus       108 vnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~  187 (277)
T 3gvc_A          108 VANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVAVGGTGAYGMSKAGIIQLSR  187 (277)
T ss_dssp             EECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHH
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCchhHHHHHHHHHHHHH
Confidence            999997532          235678999999988888754    455689999996433334456789999999998775


Q ss_pred             H------hCCCcEEEEeeCeeecCCCCCcccc-CccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhc
Q 023205          192 T------RYPYGGVILRPGFIYGTRTVGGMKL-PLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAAT  264 (286)
Q Consensus       192 ~------~~g~~~~ilRp~~v~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~  264 (286)
                      .      ..|+++++++||.+.++........ +..........+.       ..     ....+.+++|+|++++.++.
T Consensus       188 ~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~-------~~-----~~~r~~~pedvA~~v~~L~s  255 (277)
T 3gvc_A          188 ITAAELRSSGIRSNTLLPAFVDTPMQQTAMAMFDGALGAGGARSMI-------AR-----LQGRMAAPEEMAGIVVFLLS  255 (277)
T ss_dssp             HHHHHHGGGTEEEEEEEECSBCCHHHHHHHTCC------CCHHHHH-------HH-----HHSSCBCHHHHHHHHHHHHS
T ss_pred             HHHHHhcccCeEEEEEeeCCccCchHHHhhhcchhhHHHHhhhhhh-------hc-----cccCCCCHHHHHHHHHHHcC
Confidence            2      4789999999999987532110000 0000000000000       00     11346899999999999996


Q ss_pred             CC--CCCCCeeEeccccccc
Q 023205          265 DP--VFPPGIVDVHGILRYS  282 (286)
Q Consensus       265 ~~--~~~~~~~~l~~~~~~s  282 (286)
                      ..  ...|+++++.|+...+
T Consensus       256 ~~a~~itG~~i~vdGG~~~~  275 (277)
T 3gvc_A          256 DDASMITGTTQIADGGTIAA  275 (277)
T ss_dssp             GGGTTCCSCEEEESTTGGGS
T ss_pred             CccCCccCcEEEECCcchhc
Confidence            53  3568999999986553

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.90  E-value=2.2e-22  Score=167.88  Aligned_cols=210  Identities=17%  Similarity=0.178  Sum_probs=151.4

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc------cccCCceeEEeccCCCHhHHHHHhc-------
Q 023205           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD-------  120 (286)
Q Consensus        54 ~~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~------~~~~~~~~~i~~Dl~d~~~~~~~~~-------  120 (286)
                      ...++||||||+|+||++++++|+++|++|++++++......      .....++.++.+|++|.++++++++       
T Consensus        11 ~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   90 (256)
T 3ezl_A           11 MSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVKAEVG   90 (256)
T ss_dssp             --CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHHhcC
Confidence            346799999999999999999999999999998844333211      1123578999999999998888775       


Q ss_pred             CCCEEEEccccCCC----------cchhhhhhhHHHHHHHHHH----HHcCCCEEEEEecCCcCCCCccccchHHHHHHH
Q 023205          121 GVTAVISCVGGFGS----------NSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKRAA  186 (286)
Q Consensus       121 ~~d~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a----~~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~  186 (286)
                      ++|+||||||....          ....+++|+.++.++++++    ++.+..+||++||...-........|+.+|...
T Consensus        91 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~  170 (256)
T 3ezl_A           91 EIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYSTAKAGI  170 (256)
T ss_dssp             CEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCGGGSCSCCHHHHHHHHHH
T ss_pred             CCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhccCCCCCcccHHHHHHH
Confidence            67999999996532          1356789999988887766    445667999999964333445567899999999


Q ss_pred             HHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHH
Q 023205          187 ETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAV  260 (286)
Q Consensus       187 E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~  260 (286)
                      +.+.+.      ..|+++++++||.+..+.....       .......+...      .|     ...+.+++|+|++++
T Consensus       171 ~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-------~~~~~~~~~~~------~~-----~~~~~~~~dva~~~~  232 (256)
T 3ezl_A          171 HGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAI-------RPDVLEKIVAT------IP-----VRRLGSPDEIGSIVA  232 (256)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTS-------CHHHHHHHHHH------ST-----TSSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCEEEEEEECcccCcccccc-------CHHHHHHHHhc------CC-----CCCCcCHHHHHHHHH
Confidence            886652      4689999999999976532111       01111111111      11     134678999999999


Q ss_pred             HHhcCC--CCCCCeeEecccccc
Q 023205          261 RAATDP--VFPPGIVDVHGILRY  281 (286)
Q Consensus       261 ~~l~~~--~~~~~~~~l~~~~~~  281 (286)
                      .++..+  ...|+++++.|+..+
T Consensus       233 ~l~s~~~~~~tG~~i~vdgG~~~  255 (256)
T 3ezl_A          233 WLASEESGFSTGADFSLNGGLHM  255 (256)
T ss_dssp             HHHSGGGTTCCSCEEEESTTSCC
T ss_pred             HHhCCcccCCcCcEEEECCCEeC
Confidence            998643  356899999987654

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=99.90  E-value=6.5e-22  Score=162.95  Aligned_cols=199  Identities=16%  Similarity=0.021  Sum_probs=147.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc------cccCCceeEEeccCCCHhHHHHHhc-------CC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD-------GV  122 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~------~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~  122 (286)
                      +++++||||+|+||++++++|+++|++|++++|+.++...      .....++.++.+|++|+++++++++       ++
T Consensus         2 ~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   81 (235)
T 3l77_A            2 MKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFGDV   81 (235)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHSSC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcCCC
Confidence            5789999999999999999999999999999998654211      1224578999999999999998886       68


Q ss_pred             CEEEEccccCCC----------cchhhhhhhHHHHHHHHHHHHc---CCCEEEEEecCCcCCCCccccchHHHHHHHHHH
Q 023205          123 TAVISCVGGFGS----------NSYMYKINGTANINAIRAASEK---GVKRFVYISAADFGVANYLLQGYYEGKRAAETE  189 (286)
Q Consensus       123 d~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~~~---~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~  189 (286)
                      |++|||||....          ....+++|+.++.++++++...   +..++|++||............|+.+|...+.+
T Consensus        82 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sKaa~~~~  161 (235)
T 3l77_A           82 DVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRTGGLALVTTSDVSARLIPYGGGYVSTKWAARAL  161 (235)
T ss_dssp             SEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSCCTTCHHHHHHHHHHHHH
T ss_pred             CEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEEecchhcccCCCcchHHHHHHHHHHH
Confidence            999999997532          1356789999999998887542   235778887754333334456899999999987


Q ss_pred             HHH----hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcC
Q 023205          190 LLT----RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATD  265 (286)
Q Consensus       190 ~~~----~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~  265 (286)
                      .+.    ..++++++++||.+..+......                         . ......+++++|+|++++.++..
T Consensus       162 ~~~l~~~~~~i~v~~v~PG~v~T~~~~~~~-------------------------~-~~~~~~~~~p~dva~~v~~l~~~  215 (235)
T 3l77_A          162 VRTFQIENPDVRFFELRPGAVDTYFGGSKP-------------------------G-KPKEKGYLKPDEIAEAVRCLLKL  215 (235)
T ss_dssp             HHHHHHHCTTSEEEEEEECSBSSSTTTCCS-------------------------C-CCGGGTCBCHHHHHHHHHHHHTS
T ss_pred             HHHHhhcCCCeEEEEEeCCccccccccccC-------------------------C-cccccCCCCHHHHHHHHHHHHcC
Confidence            653    46899999999999654321110                         0 01122568999999999999987


Q ss_pred             CCC--CCCeeEeccccc
Q 023205          266 PVF--PPGIVDVHGILR  280 (286)
Q Consensus       266 ~~~--~~~~~~l~~~~~  280 (286)
                      +..  .++++...+.+.
T Consensus       216 ~~~~~~~~~~~~~~~~~  232 (235)
T 3l77_A          216 PKDVRVEELMLRSVYQR  232 (235)
T ss_dssp             CTTCCCCEEEECCTTSC
T ss_pred             CCCCccceEEEeecccC
Confidence            663  345555555443

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.90  E-value=1.4e-22  Score=169.72  Aligned_cols=208  Identities=18%  Similarity=0.126  Sum_probs=152.5

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc--cccCCceeEEeccCCCHhHHHHHhc-------CCCEE
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSWANNVIWHQGNLLSSDSWKEALD-------GVTAV  125 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~--~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d~v  125 (286)
                      ..++++||||+|+||++++++|+++|++|++++|+.++...  +....++.++.+|++|+++++++++       .+|++
T Consensus         5 ~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~l   84 (263)
T 2a4k_A            5 SGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHGV   84 (263)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHHcCCCcEE
Confidence            35789999999999999999999999999999998654211  1122578899999999998887775       47999


Q ss_pred             EEccccCCC----------cchhhhhhhHHHHHHHHHHHHcC--CCEEEEEecCCcCCCCccccchHHHHHHHHHHHHH-
Q 023205          126 ISCVGGFGS----------NSYMYKINGTANINAIRAASEKG--VKRFVYISAADFGVANYLLQGYYEGKRAAETELLT-  192 (286)
Q Consensus       126 i~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~~~~--v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~~-  192 (286)
                      |||||....          ....+++|+.++.++++++....  ..+||++||.... .......|+.+|...+.+.+. 
T Consensus        85 vnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~-~~~~~~~Y~asK~a~~~~~~~l  163 (263)
T 2a4k_A           85 AHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGL-GAFGLAHYAAGKLGVVGLARTL  163 (263)
T ss_dssp             EEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTC-CHHHHHHHHHCSSHHHHHHHHH
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecchhc-CCCCcHHHHHHHHHHHHHHHHH
Confidence            999996532          13467899999999999987653  3599999995322 333456899999988876642 


Q ss_pred             -----hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcCC-
Q 023205          193 -----RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDP-  266 (286)
Q Consensus       193 -----~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~-  266 (286)
                           ..|+++++++||.+.++.....   +    ......+..      ..|.     ..+.+++|+|++++.++..+ 
T Consensus       164 a~e~~~~gi~v~~v~PG~v~t~~~~~~---~----~~~~~~~~~------~~p~-----~~~~~p~dvA~~v~~l~s~~~  225 (263)
T 2a4k_A          164 ALELARKGVRVNVLLPGLIQTPMTAGL---P----PWAWEQEVG------ASPL-----GRAGRPEEVAQAALFLLSEES  225 (263)
T ss_dssp             HHHHTTTTCEEEEEEECSBCCGGGTTS---C----HHHHHHHHH------TSTT-----CSCBCHHHHHHHHHHHHSGGG
T ss_pred             HHHhhhhCcEEEEEEeCcCcCchhhhc---C----HHHHHHHHh------cCCC-----CCCcCHHHHHHHHHHHhCccc
Confidence                 4689999999999987643211   0    011111111      1122     24689999999999999754 


Q ss_pred             -CCCCCeeEecccccc
Q 023205          267 -VFPPGIVDVHGILRY  281 (286)
Q Consensus       267 -~~~~~~~~l~~~~~~  281 (286)
                       ...|+.+++.|+..+
T Consensus       226 ~~~tG~~i~vdgG~~~  241 (263)
T 2a4k_A          226 AYITGQALYVDGGRSI  241 (263)
T ss_dssp             TTCCSCEEEESTTTTT
T ss_pred             cCCcCCEEEECCCccc
Confidence             246889999987654

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=99.90  E-value=2.8e-23  Score=174.40  Aligned_cols=211  Identities=14%  Similarity=0.068  Sum_probs=153.8

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc------cccCCceeEEeccCCCHhHHHHHhc-------C
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD-------G  121 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~------~~~~~~~~~i~~Dl~d~~~~~~~~~-------~  121 (286)
                      ..++||||||+|+||++++++|+++|++|++++|+.++...      .....++.++++|++|+++++++++       +
T Consensus        19 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   98 (266)
T 4egf_A           19 DGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEAFGG   98 (266)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHHHTS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            46799999999999999999999999999999998654211      1124579999999999998887765       7


Q ss_pred             CCEEEEccccCCC----------cchhhhhhhHHHHHHHHHHHHc----C-CCEEEEEecCCcCCCCccccchHHHHHHH
Q 023205          122 VTAVISCVGGFGS----------NSYMYKINGTANINAIRAASEK----G-VKRFVYISAADFGVANYLLQGYYEGKRAA  186 (286)
Q Consensus       122 ~d~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~~~----~-v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~  186 (286)
                      +|++|||||....          ....+++|+.++.++++++...    + ..+||++||............|+.+|...
T Consensus        99 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~  178 (266)
T 4egf_A           99 LDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAPLPDHYAYCTSKAGL  178 (266)
T ss_dssp             CSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTCHHHHHHHHHH
T ss_pred             CCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhccCCCCChHHHHHHHHH
Confidence            8999999997532          1346789999999888887542    2 35899999964333344567899999999


Q ss_pred             HHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHH
Q 023205          187 ETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAV  260 (286)
Q Consensus       187 E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~  260 (286)
                      +.+.+.      ..|+++++++||.+..+.....+       .. ........   ..+|.     ..+.+++|+|++++
T Consensus       179 ~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~-------~~-~~~~~~~~---~~~p~-----~r~~~p~dva~~v~  242 (266)
T 4egf_A          179 VMATKVLARELGPHGIRANSVCPTVVLTEMGQRVW-------GD-EAKSAPMI---ARIPL-----GRFAVPHEVSDAVV  242 (266)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEESCBCSHHHHHHT-------CS-HHHHHHHH---TTCTT-----SSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHhhhCeEEEEEEeCCCcCchhhhhc-------cC-hHHHHHHH---hcCCC-----CCCcCHHHHHHHHH
Confidence            986653      46899999999999765321100       00 01111111   11222     34678999999999


Q ss_pred             HHhcCC--CCCCCeeEecccccc
Q 023205          261 RAATDP--VFPPGIVDVHGILRY  281 (286)
Q Consensus       261 ~~l~~~--~~~~~~~~l~~~~~~  281 (286)
                      .++...  ...|+++++.|+..+
T Consensus       243 ~L~s~~~~~itG~~i~vdGG~~~  265 (266)
T 4egf_A          243 WLASDAASMINGVDIPVDGGYTM  265 (266)
T ss_dssp             HHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHhCchhcCccCcEEEECCCccC
Confidence            999753  356899999998654

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=99.90  E-value=6.1e-22  Score=168.57  Aligned_cols=211  Identities=17%  Similarity=0.104  Sum_probs=154.0

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcc-cc------cccCCceeEEeccCCCHhHHHHHhc-------
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSS-LR------DSWANNVIWHQGNLLSSDSWKEALD-------  120 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~-~~------~~~~~~~~~i~~Dl~d~~~~~~~~~-------  120 (286)
                      ..+++|||||+|+||++++++|+++|++|+++.|+.+.. ..      .....++.++.+|++|+++++++++       
T Consensus        48 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  127 (294)
T 3r3s_A           48 KDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREALG  127 (294)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            467999999999999999999999999999998874321 11      1124578999999999998887764       


Q ss_pred             CCCEEEEccccCCC-----------cchhhhhhhHHHHHHHHHHHHcCCC--EEEEEecCCcCCCCccccchHHHHHHHH
Q 023205          121 GVTAVISCVGGFGS-----------NSYMYKINGTANINAIRAASEKGVK--RFVYISAADFGVANYLLQGYYEGKRAAE  187 (286)
Q Consensus       121 ~~d~vi~~a~~~~~-----------~~~~~~~~~~~~~~l~~~a~~~~v~--~~v~~Ss~~~~~~~~~~~~y~~sK~~~E  187 (286)
                      ++|++|||||....           ....+++|+.++.++++++.....+  +||++||............|+.+|...+
T Consensus       128 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~  207 (294)
T 3r3s_A          128 GLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQAYQPSPHLLDYAATKAAIL  207 (294)
T ss_dssp             CCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCGGGTSCCTTCHHHHHHHHHHH
T ss_pred             CCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECChhhccCCCCchHHHHHHHHHH
Confidence            68999999996421           1356789999999999999776444  9999999643333445678999999999


Q ss_pred             HHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHH
Q 023205          188 TELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVR  261 (286)
Q Consensus       188 ~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~  261 (286)
                      .+.+.      ..|+++++++||.+.++........     ...   .   .......|     ...+.+++|+|++++.
T Consensus       208 ~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~-----~~~---~---~~~~~~~p-----~~r~~~p~dvA~~v~~  271 (294)
T 3r3s_A          208 NYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQT-----QDK---I---PQFGQQTP-----MKRAGQPAELAPVYVY  271 (294)
T ss_dssp             HHHHHHHHHHGGGTCEEEEEEECSBCSHHHHTTTSC-----GGG---S---TTTTTTST-----TSSCBCGGGGHHHHHH
T ss_pred             HHHHHHHHHHhhcCeEEEEEecCcCccccccccCCC-----HHH---H---HHHHhcCC-----CCCCcCHHHHHHHHHH
Confidence            87653      4589999999999987531110000     000   0   00001111     2357889999999999


Q ss_pred             HhcCC--CCCCCeeEecccccc
Q 023205          262 AATDP--VFPPGIVDVHGILRY  281 (286)
Q Consensus       262 ~l~~~--~~~~~~~~l~~~~~~  281 (286)
                      ++...  ...|+++++.|+..+
T Consensus       272 L~s~~~~~itG~~i~vdGG~~l  293 (294)
T 3r3s_A          272 LASQESSYVTAEVHGVCGGEHL  293 (294)
T ss_dssp             HHSGGGTTCCSCEEEESTTCCC
T ss_pred             HhCccccCCCCCEEEECCCccC
Confidence            99654  356899999998765

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.90  E-value=2.8e-22  Score=170.89  Aligned_cols=218  Identities=12%  Similarity=0.049  Sum_probs=153.2

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc---c--ccCC---ceeEEeccCCCHhHHHHHhc------
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR---D--SWAN---NVIWHQGNLLSSDSWKEALD------  120 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~---~--~~~~---~~~~i~~Dl~d~~~~~~~~~------  120 (286)
                      ..++++||||+|+||++++++|+++|++|++++|+.++...   +  ....   ++.++.+|++|+++++++++      
T Consensus        25 ~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  104 (297)
T 1xhl_A           25 SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKF  104 (297)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHHhc
Confidence            35789999999999999999999999999999998644211   0  0112   68899999999998888775      


Q ss_pred             -CCCEEEEccccCCC------------cchhhhhhhHHHHHHHHHHHH----cCCCEEEEEecCCcCCCC-ccccchHHH
Q 023205          121 -GVTAVISCVGGFGS------------NSYMYKINGTANINAIRAASE----KGVKRFVYISAADFGVAN-YLLQGYYEG  182 (286)
Q Consensus       121 -~~d~vi~~a~~~~~------------~~~~~~~~~~~~~~l~~~a~~----~~v~~~v~~Ss~~~~~~~-~~~~~y~~s  182 (286)
                       ++|+||||||....            ....+++|+.++.++++++..    .+ .+||++||....... .....|+.+
T Consensus       105 g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-g~IV~isS~~~~~~~~~~~~~Y~as  183 (297)
T 1xhl_A          105 GKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-GEIVNVSSIVAGPQAHSGYPYYACA  183 (297)
T ss_dssp             SCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGSSSCCTTSHHHHHH
T ss_pred             CCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CEEEEEcCchhccCCCCCcchHHHH
Confidence             68999999986421            124678999999988887754    34 799999995333333 456789999


Q ss_pred             HHHHHHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHH
Q 023205          183 KRAAETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVA  256 (286)
Q Consensus       183 K~~~E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva  256 (286)
                      |...+.+.+.      ..|+++++++||.+.++...... .+.. .+..........  ...+|.     ..+.+++|+|
T Consensus       184 Kaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~-~~~~-~~~~~~~~~~~~--~~~~p~-----~r~~~pedvA  254 (297)
T 1xhl_A          184 KAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMG-LPET-ASDKLYSFIGSR--KECIPV-----GHCGKPEEIA  254 (297)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTT-CCHH-HHHHHHHHHHHC--TTTCTT-----SSCBCHHHHH
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCccccccc-cccc-cccchHHHHHHH--HhcCCC-----CCCcCHHHHH
Confidence            9999987653      46899999999999876421100 0000 000000011111  111222     3478999999


Q ss_pred             HHHHHHhcCC---CCCCCeeEeccccccc
Q 023205          257 KVAVRAATDP---VFPPGIVDVHGILRYS  282 (286)
Q Consensus       257 ~~~~~~l~~~---~~~~~~~~l~~~~~~s  282 (286)
                      ++++.++..+   ...|+.+++.|+..+.
T Consensus       255 ~~v~~l~s~~~~~~itG~~i~vdGG~~~~  283 (297)
T 1xhl_A          255 NIIVFLADRNLSSYIIGQSIVADGGSTLV  283 (297)
T ss_dssp             HHHHHHHCHHHHTTCCSCEEEESTTGGGC
T ss_pred             HHHHHHhCCcccCCccCcEEEECCCcccc
Confidence            9999999754   4568999999986543

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=99.90  E-value=1.2e-22  Score=171.45  Aligned_cols=209  Identities=15%  Similarity=0.103  Sum_probs=148.9

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc---cc-cCCceeEEeccCCCHhHHHHHhc-------CCC
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR---DS-WANNVIWHQGNLLSSDSWKEALD-------GVT  123 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~---~~-~~~~~~~i~~Dl~d~~~~~~~~~-------~~d  123 (286)
                      ..++|+||||+|+||++++++|+++|++|++++|+.++...   +. ...++.++.+|++|+++++++++       ++|
T Consensus        28 ~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD  107 (276)
T 2b4q_A           28 AGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYGDCQAIPADLSSEAGARRLAQALGELSARLD  107 (276)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSSCEEECCCCTTSHHHHHHHHHHHHHHCSCCS
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence            35789999999999999999999999999999998643211   11 01268889999999998887775       689


Q ss_pred             EEEEccccCCC----------cchhhhhhhHHHHHHHHHHH----HcCC----CEEEEEecCCcCCCCcccc-chHHHHH
Q 023205          124 AVISCVGGFGS----------NSYMYKINGTANINAIRAAS----EKGV----KRFVYISAADFGVANYLLQ-GYYEGKR  184 (286)
Q Consensus       124 ~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~----~~~v----~~~v~~Ss~~~~~~~~~~~-~y~~sK~  184 (286)
                      +||||||....          ....+++|+.++.++++++.    +.+.    ++||++||........... .|+.+|.
T Consensus       108 ~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~~~~~~~~~Y~asK~  187 (276)
T 2b4q_A          108 ILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAMGEQAYAYGPSKA  187 (276)
T ss_dssp             EEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTCCCCCSCTTHHHHHH
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcCCCCCCccccHHHHH
Confidence            99999986421          13567899999988877764    3343    7999999953222223344 8999999


Q ss_pred             HHHHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHH
Q 023205          185 AAETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKV  258 (286)
Q Consensus       185 ~~E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~  258 (286)
                      ..|.+.+.      ..|+++++++||.+..+......       ......+...    ...|.     ..+.+++|+|++
T Consensus       188 a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~-------~~~~~~~~~~----~~~p~-----~r~~~p~dvA~~  251 (276)
T 2b4q_A          188 ALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTRHIA-------NDPQALEADS----ASIPM-----GRWGRPEEMAAL  251 (276)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECCCCSTTTHHHH-------HCHHHHHHHH----HTSTT-----SSCCCHHHHHHH
T ss_pred             HHHHHHHHHHHHhcccCeEEEEEEeccCcCcchhhcc-------hhHHHHHHhh----cCCCC-----CCcCCHHHHHHH
Confidence            99987753      46899999999999876421100       0011111110    01222     247899999999


Q ss_pred             HHHHhcCC--CCCCCeeEecccc
Q 023205          259 AVRAATDP--VFPPGIVDVHGIL  279 (286)
Q Consensus       259 ~~~~l~~~--~~~~~~~~l~~~~  279 (286)
                      ++.++..+  ...|+++++.|+.
T Consensus       252 v~~l~s~~~~~~tG~~i~vdGG~  274 (276)
T 2b4q_A          252 AISLAGTAGAYMTGNVIPIDGGF  274 (276)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTT
T ss_pred             HHHHhCccccCCCCCEEEeCCCc
Confidence            99999764  3468899998874

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=99.89  E-value=2.4e-22  Score=169.09  Aligned_cols=207  Identities=16%  Similarity=0.116  Sum_probs=150.2

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc------cccCCceeEEeccCCCHhHHHHHhc-------C
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD-------G  121 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~------~~~~~~~~~i~~Dl~d~~~~~~~~~-------~  121 (286)
                      ..++|+||||+|+||++++++|+++|++|+++.|+..+...      .....++.++.+|++|.+++.++++       +
T Consensus        28 ~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~  107 (271)
T 4iin_A           28 TGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQSDGG  107 (271)
T ss_dssp             SCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            35799999999999999999999999999999996543211      1123578999999999998888775       6


Q ss_pred             CCEEEEccccCCC----------cchhhhhhhHHHHHHHHHHH----HcCCCEEEEEecCCcCCCCccccchHHHHHHHH
Q 023205          122 VTAVISCVGGFGS----------NSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEGKRAAE  187 (286)
Q Consensus       122 ~d~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~----~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E  187 (286)
                      +|+||||||....          ....+++|+.++.++++.+.    +.+..+||++||........+...|+.+|...+
T Consensus       108 id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~  187 (271)
T 4iin_A          108 LSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGERGNMGQTNYSASKGGMI  187 (271)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHHHHH
T ss_pred             CCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEechhhcCCCCCchHhHHHHHHHH
Confidence            8999999997532          13567899999988877764    345679999999532223345678999999999


Q ss_pred             HHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHH
Q 023205          188 TELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVR  261 (286)
Q Consensus       188 ~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~  261 (286)
                      .+.+.      ..|+++++++||.+..+.....           .+......  ....|     ...+.+++|+|++++.
T Consensus       188 ~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~-----------~~~~~~~~--~~~~~-----~~~~~~p~dvA~~i~~  249 (271)
T 4iin_A          188 AMSKSFAYEGALRNIRFNSVTPGFIETDMNANL-----------KDELKADY--VKNIP-----LNRLGSAKEVAEAVAF  249 (271)
T ss_dssp             HHHHHHHHHHHTTTEEEEEEEECSBCCC-----------------------C--GGGCT-----TCSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCcEEEEEEeCcccCCchhhh-----------cHHHHHHH--HhcCC-----cCCCcCHHHHHHHHHH
Confidence            87753      4789999999999976543211           00000000  01111     2357899999999999


Q ss_pred             HhcCCC--CCCCeeEecccc
Q 023205          262 AATDPV--FPPGIVDVHGIL  279 (286)
Q Consensus       262 ~l~~~~--~~~~~~~l~~~~  279 (286)
                      ++..+.  ..|+++++.|+.
T Consensus       250 l~s~~~~~itG~~i~vdGG~  269 (271)
T 4iin_A          250 LLSDHSSYITGETLKVNGGL  269 (271)
T ss_dssp             HHSGGGTTCCSCEEEESTTS
T ss_pred             HhCCCcCCCcCCEEEeCCCe
Confidence            997543  568999998874

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=99.89  E-value=5.1e-23  Score=173.18  Aligned_cols=212  Identities=14%  Similarity=0.065  Sum_probs=154.8

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc-----cccCCceeEEeccCCCHhHHHHHhc-------CC
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------GV  122 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~-----~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~  122 (286)
                      ..+++|||||+|+||++++++|+++|++|++++|+.++...     .....++.++.+|++|+++++++++       ++
T Consensus        25 ~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  104 (271)
T 4ibo_A           25 GGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQGIDV  104 (271)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHTCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHCCCC
Confidence            46799999999999999999999999999999998654211     1123578999999999999888876       68


Q ss_pred             CEEEEccccCCC----------cchhhhhhhHHHHHHHHHHHH----cCCCEEEEEecCCcCCCCccccchHHHHHHHHH
Q 023205          123 TAVISCVGGFGS----------NSYMYKINGTANINAIRAASE----KGVKRFVYISAADFGVANYLLQGYYEGKRAAET  188 (286)
Q Consensus       123 d~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~~----~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~  188 (286)
                      |++|||||....          +...+++|+.++.++.+++..    .+..+||++||............|+.+|...+.
T Consensus       105 D~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~asKaa~~~  184 (271)
T 4ibo_A          105 DILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSELARATVAPYTVAKGGIKM  184 (271)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCTTCHHHHHHHHHHHH
T ss_pred             CEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCCCCCCchhHHHHHHHHHH
Confidence            999999996531          234678999999988777644    455699999995433344456789999999998


Q ss_pred             HHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHH
Q 023205          189 ELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRA  262 (286)
Q Consensus       189 ~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~  262 (286)
                      +.+.      ..|+++++++||.+..+........     ....+.+..      ..|.     ..+.+++|+|++++.+
T Consensus       185 l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~-----~~~~~~~~~------~~p~-----~r~~~pedva~~v~~L  248 (271)
T 4ibo_A          185 LTRAMAAEWAQYGIQANAIGPGYMLTDMNQALIDN-----PEFDAWVKA------RTPA-----KRWGKPQELVGTAVFL  248 (271)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHHC-----HHHHHHHHH------HSTT-----CSCBCGGGGHHHHHHH
T ss_pred             HHHHHHHHHhhhCeEEEEEEeccEeCcchhhcccC-----HHHHHHHHh------cCCC-----CCCcCHHHHHHHHHHH
Confidence            7753      4689999999999986642110000     011111111      1121     3467899999999999


Q ss_pred             hcCC--CCCCCeeEeccccccc
Q 023205          263 ATDP--VFPPGIVDVHGILRYS  282 (286)
Q Consensus       263 l~~~--~~~~~~~~l~~~~~~s  282 (286)
                      +...  ...|+++++.|+...+
T Consensus       249 ~s~~~~~itG~~i~vdGG~~~~  270 (271)
T 4ibo_A          249 SASASDYVNGQIIYVDGGMLSV  270 (271)
T ss_dssp             HSGGGTTCCSCEEEESTTGGGB
T ss_pred             hCccccCCCCcEEEECCCeecc
Confidence            8753  3568999999986543

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=99.89  E-value=1.8e-22  Score=168.99  Aligned_cols=211  Identities=12%  Similarity=0.031  Sum_probs=151.6

Q ss_pred             CCeEEEEcCC--ChhHHHHHHHHHHCCCeEEEEecCCCcc--cccc--cCCceeEEeccCCCHhHHHHHhc-------CC
Q 023205           56 SEKLLVLGGN--GFVGSHICREALDRGLTVASLSRSGRSS--LRDS--WANNVIWHQGNLLSSDSWKEALD-------GV  122 (286)
Q Consensus        56 ~~~VlVtGat--G~iG~~l~~~Ll~~g~~V~~l~R~~~~~--~~~~--~~~~~~~i~~Dl~d~~~~~~~~~-------~~  122 (286)
                      .++|+||||+  |+||++++++|+++|++|++++|+.+..  ..+.  ....+.++.+|++|+++++++++       ++
T Consensus         8 ~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   87 (261)
T 2wyu_A            8 GKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFGGL   87 (261)
T ss_dssp             TCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHSSE
T ss_pred             CCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            5789999999  9999999999999999999999986410  1110  11347899999999998888776       68


Q ss_pred             CEEEEccccCCC--------------cchhhhhhhHHHHHHHHHHHHcC--CCEEEEEecCCcCCCCccccchHHHHHHH
Q 023205          123 TAVISCVGGFGS--------------NSYMYKINGTANINAIRAASEKG--VKRFVYISAADFGVANYLLQGYYEGKRAA  186 (286)
Q Consensus       123 d~vi~~a~~~~~--------------~~~~~~~~~~~~~~l~~~a~~~~--v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~  186 (286)
                      |+||||||....              ....+++|+.++.++++++.+.-  -.+||++||............|+.+|...
T Consensus        88 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~  167 (261)
T 2wyu_A           88 DYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVVPKYNVMAIAKAAL  167 (261)
T ss_dssp             EEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSBCTTCHHHHHHHHHH
T ss_pred             CEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhccCCEEEEEecccccCCCCCchHHHHHHHHH
Confidence            999999986431              12467899999999999987642  24899999953222334456799999999


Q ss_pred             HHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHH
Q 023205          187 ETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAV  260 (286)
Q Consensus       187 E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~  260 (286)
                      |.+.+.      ..|+++++++||.++++.....        ....+.......   ..|.     ..+.+++|+|++++
T Consensus       168 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~--------~~~~~~~~~~~~---~~p~-----~~~~~~~dva~~v~  231 (261)
T 2wyu_A          168 EASVRYLAYELGPKGVRVNAISAGPVRTVAARSI--------PGFTKMYDRVAQ---TAPL-----RRNITQEEVGNLGL  231 (261)
T ss_dssp             HHHHHHHHHHHGGGTCEEEEEEECCCCCTGGGGC--------TTHHHHHHHHHH---HSTT-----SSCCCHHHHHHHHH
T ss_pred             HHHHHHHHHHHhhhCcEEEEEeeCCCcCchhhhc--------cccHHHHHHHHh---cCCC-----CCCCCHHHHHHHHH
Confidence            987753      3589999999999988743211        011111111111   1121     23578999999999


Q ss_pred             HHhcCCC--CCCCeeEeccccccc
Q 023205          261 RAATDPV--FPPGIVDVHGILRYS  282 (286)
Q Consensus       261 ~~l~~~~--~~~~~~~l~~~~~~s  282 (286)
                      .++..+.  ..|++|++.|+..++
T Consensus       232 ~l~s~~~~~~tG~~~~vdgG~~~~  255 (261)
T 2wyu_A          232 FLLSPLASGITGEVVYVDAGYHIM  255 (261)
T ss_dssp             HHHSGGGTTCCSCEEEESTTGGGB
T ss_pred             HHcChhhcCCCCCEEEECCCcccc
Confidence            9996532  458899999886554

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=99.89  E-value=6.9e-23  Score=172.30  Aligned_cols=210  Identities=17%  Similarity=0.074  Sum_probs=152.4

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc-----cccCCceeEEeccCCCHhHHHHHhc-------CC
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------GV  122 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~-----~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~  122 (286)
                      ..+++|||||+|+||++++++|+++|++|++++|+.+....     .....++.++.+|++|.++++++++       .+
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  106 (270)
T 3ftp_A           27 DKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEFGAL  106 (270)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHHcCCC
Confidence            45789999999999999999999999999999998654211     1123478899999999998888776       68


Q ss_pred             CEEEEccccCCC----------cchhhhhhhHHHHHHHHHHHH----cCCCEEEEEecCCcCCCCccccchHHHHHHHHH
Q 023205          123 TAVISCVGGFGS----------NSYMYKINGTANINAIRAASE----KGVKRFVYISAADFGVANYLLQGYYEGKRAAET  188 (286)
Q Consensus       123 d~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~~----~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~  188 (286)
                      |++|||||....          +...+++|+.++.++++++..    .+..+||++||...-........|+.+|...+.
T Consensus       107 D~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~  186 (270)
T 3ftp_A          107 NVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAGNPGQVNYAAAKAGVAG  186 (270)
T ss_dssp             CEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTBHHHHHHHHHHHH
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCCCchhHHHHHHHHHH
Confidence            999999996532          135678999999999888753    345689999995322223445789999999988


Q ss_pred             HHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHH
Q 023205          189 ELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRA  262 (286)
Q Consensus       189 ~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~  262 (286)
                      +.+.      ..|+++++++||.+..+.....        .  .+.. ....  ...|     ...+.+++|+|++++.+
T Consensus       187 l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~--------~--~~~~-~~~~--~~~p-----~~r~~~pedvA~~v~~L  248 (270)
T 3ftp_A          187 MTRALAREIGSRGITVNCVAPGFIDTDMTKGL--------P--QEQQ-TALK--TQIP-----LGRLGSPEDIAHAVAFL  248 (270)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECSBCSHHHHHS--------C--HHHH-HHHH--TTCT-----TCSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHhhhCeEEEEEEeCCCcCcchhhc--------C--HHHH-HHHH--hcCC-----CCCCCCHHHHHHHHHHH
Confidence            6653      4689999999999975532110        0  0111 1111  1122     23468999999999999


Q ss_pred             hcCC--CCCCCeeEeccccccc
Q 023205          263 ATDP--VFPPGIVDVHGILRYS  282 (286)
Q Consensus       263 l~~~--~~~~~~~~l~~~~~~s  282 (286)
                      +..+  ...|+++++.|+..++
T Consensus       249 ~s~~~~~itG~~i~vdGG~~~s  270 (270)
T 3ftp_A          249 ASPQAGYITGTTLHVNGGMFMS  270 (270)
T ss_dssp             HSGGGTTCCSCEEEESTTSSCC
T ss_pred             hCCCcCCccCcEEEECCCcccC
Confidence            8643  3468999999986543

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=99.89  E-value=2.4e-22  Score=167.60  Aligned_cols=216  Identities=13%  Similarity=0.070  Sum_probs=155.4

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc--cccCCceeEEeccCCCHhHHHHHhc-------CCCEE
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSWANNVIWHQGNLLSSDSWKEALD-------GVTAV  125 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~--~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d~v  125 (286)
                      ..++++||||+|+||++++++|+++|++|++++|+.++...  +....++.++.+|++|+++++++++       .+|++
T Consensus         7 ~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l   86 (255)
T 4eso_A            7 QGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQTLGAIDLL   86 (255)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSSEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            46799999999999999999999999999999998654211  1123578999999999998887664       68999


Q ss_pred             EEccccCCC----------cchhhhhhhHHHHHHHHHHHHcC--CCEEEEEecCCcCCCCccccchHHHHHHHHHHHHH-
Q 023205          126 ISCVGGFGS----------NSYMYKINGTANINAIRAASEKG--VKRFVYISAADFGVANYLLQGYYEGKRAAETELLT-  192 (286)
Q Consensus       126 i~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~~~~--v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~~-  192 (286)
                      |||||....          ....+++|+.++.++++++...-  -.+||++||............|+.+|...+.+.+. 
T Consensus        87 v~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~l  166 (255)
T 4eso_A           87 HINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVADEGGHPGMSVYSASKAALVSFASVL  166 (255)
T ss_dssp             EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGGSSBCTTBHHHHHHHHHHHHHHHHH
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhhcCCCCCchHHHHHHHHHHHHHHHH
Confidence            999987532          13567899999999999987642  24899999954333344567899999999987653 


Q ss_pred             -----hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcC-C
Q 023205          193 -----RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATD-P  266 (286)
Q Consensus       193 -----~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~-~  266 (286)
                           ..|+++++++||.+..+...... .+    ......+......  ..|     ...+.+++|+|++++.++.. .
T Consensus       167 a~e~~~~gi~vn~v~PG~v~T~~~~~~~-~~----~~~~~~~~~~~~~--~~p-----~~r~~~pedvA~~v~~L~s~~~  234 (255)
T 4eso_A          167 AAELLPRGIRVNSVSPGFIDTPTKGVAG-IT----EAERAEFKTLGDN--ITP-----MKRNGTADEVARAVLFLAFEAT  234 (255)
T ss_dssp             HHHTGGGTCEEEEEEECSBCCSSTTCTT-SC----HHHHHHHHHHHHH--HST-----TSSCBCHHHHHHHHHHHHHTCT
T ss_pred             HHHHhhhCcEEEEEecCcccCccccccc-CC----hhhHHHHHHHHhc--cCC-----CCCCcCHHHHHHHHHHHcCcCc
Confidence                 45899999999999877532110 00    0011111111111  112     12467899999999998875 2


Q ss_pred             CCCCCeeEeccccccc
Q 023205          267 VFPPGIVDVHGILRYS  282 (286)
Q Consensus       267 ~~~~~~~~l~~~~~~s  282 (286)
                      ...|+++++.|+...+
T Consensus       235 ~itG~~i~vdGG~~~~  250 (255)
T 4eso_A          235 FTTGAKLAVDGGLGQK  250 (255)
T ss_dssp             TCCSCEEEESTTTTTT
T ss_pred             CccCCEEEECCCcccc
Confidence            3468999999987654

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=99.89  E-value=2.6e-22  Score=168.96  Aligned_cols=206  Identities=17%  Similarity=0.169  Sum_probs=142.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc------cccCCceeEEeccCCCHhHHHHHhc-------CC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD-------GV  122 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~------~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~  122 (286)
                      +++|+||||+|+||++++++|+++|++|+++.++..+...      .....++.++.+|++|.++++++++       ++
T Consensus        26 ~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i  105 (272)
T 4e3z_A           26 TPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQFGRL  105 (272)
T ss_dssp             SCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence            5789999999999999999999999999887444322111      1123578999999999998887775       67


Q ss_pred             CEEEEccccCCC-----------cchhhhhhhHHHHHHHHHHHHc-------CCCEEEEEecCC-cCCCCccccchHHHH
Q 023205          123 TAVISCVGGFGS-----------NSYMYKINGTANINAIRAASEK-------GVKRFVYISAAD-FGVANYLLQGYYEGK  183 (286)
Q Consensus       123 d~vi~~a~~~~~-----------~~~~~~~~~~~~~~l~~~a~~~-------~v~~~v~~Ss~~-~~~~~~~~~~y~~sK  183 (286)
                      |+||||||....           ....+++|+.++.++++++...       +..+||++||.. +.........|+.+|
T Consensus       106 d~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~asK  185 (272)
T 4e3z_A          106 DGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSATQYVDYAASK  185 (272)
T ss_dssp             CEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHCCTTTCHHHHHHH
T ss_pred             CEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccCCCCCcchhHHHH
Confidence            999999997532           1346789999999998887653       245899999952 111222346799999


Q ss_pred             HHHHHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHH
Q 023205          184 RAAETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAK  257 (286)
Q Consensus       184 ~~~E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~  257 (286)
                      ...|.+.+.      ..|+++++++||.+.++......         ........   ....|     ...+.+++|+|+
T Consensus       186 aa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~---------~~~~~~~~---~~~~~-----~~~~~~~edvA~  248 (272)
T 4e3z_A          186 AAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHASGG---------LPDRAREM---APSVP-----MQRAGMPEEVAD  248 (272)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBC------------------------------CCT-----TSSCBCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCcccccC---------ChHHHHHH---hhcCC-----cCCCcCHHHHHH
Confidence            999987642      45899999999999876532110         00000000   01111     234678999999


Q ss_pred             HHHHHhcCCC--CCCCeeEeccc
Q 023205          258 VAVRAATDPV--FPPGIVDVHGI  278 (286)
Q Consensus       258 ~~~~~l~~~~--~~~~~~~l~~~  278 (286)
                      +++.++..+.  ..|++|++.|+
T Consensus       249 ~i~~l~s~~~~~~tG~~i~vdgG  271 (272)
T 4e3z_A          249 AILYLLSPSASYVTGSILNVSGG  271 (272)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHHhCCccccccCCEEeecCC
Confidence            9999996533  46899999886

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=99.89  E-value=8.2e-22  Score=167.08  Aligned_cols=211  Identities=12%  Similarity=0.013  Sum_probs=150.8

Q ss_pred             CCCeEEEEcCC--ChhHHHHHHHHHHCCCeEEEEecCCCc--ccccc--cCCceeEEeccCCCHhHHHHHhc-------C
Q 023205           55 PSEKLLVLGGN--GFVGSHICREALDRGLTVASLSRSGRS--SLRDS--WANNVIWHQGNLLSSDSWKEALD-------G  121 (286)
Q Consensus        55 ~~~~VlVtGat--G~iG~~l~~~Ll~~g~~V~~l~R~~~~--~~~~~--~~~~~~~i~~Dl~d~~~~~~~~~-------~  121 (286)
                      ..++|+||||+  |+||+++++.|+++|++|++++|+.+.  ...+.  ...++.++.+|++|+++++++++       +
T Consensus        20 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   99 (285)
T 2p91_A           20 EGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEENWGS   99 (285)
T ss_dssp             TTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSC
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            35789999999  999999999999999999999998641  01110  11347899999999998887775       6


Q ss_pred             CCEEEEccccCCC--------------cchhhhhhhHHHHHHHHHHHHcCC---CEEEEEecCCcCCCCccccchHHHHH
Q 023205          122 VTAVISCVGGFGS--------------NSYMYKINGTANINAIRAASEKGV---KRFVYISAADFGVANYLLQGYYEGKR  184 (286)
Q Consensus       122 ~d~vi~~a~~~~~--------------~~~~~~~~~~~~~~l~~~a~~~~v---~~~v~~Ss~~~~~~~~~~~~y~~sK~  184 (286)
                      +|+||||||....              ....+++|+.++.++++++.....   .+||++||............|+.+|.
T Consensus       100 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~  179 (285)
T 2p91_A          100 LDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGRNGAIVTLSYYGAEKVVPHYNVMGIAKA  179 (285)
T ss_dssp             CCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTSCCEEEEEECGGGTSBCTTTTHHHHHHH
T ss_pred             CCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCEEEEEccchhccCCCCccHHHHHHH
Confidence            8999999986531              124678999999999999876532   69999999532223344567999999


Q ss_pred             HHHHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHH
Q 023205          185 AAETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKV  258 (286)
Q Consensus       185 ~~E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~  258 (286)
                      ..+.+.+.      ..|+++++++||.+.++.....        ............   ..|.     ..+.+++|+|++
T Consensus       180 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~--------~~~~~~~~~~~~---~~p~-----~~~~~~~dva~~  243 (285)
T 2p91_A          180 ALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYSI--------TGFHLLMEHTTK---VNPF-----GKPITIEDVGDT  243 (285)
T ss_dssp             HHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC--C--------TTHHHHHHHHHH---HSTT-----SSCCCHHHHHHH
T ss_pred             HHHHHHHHHHHHhcccCcEEEEEEeCcccCchhhcc--------cchHHHHHHHHh---cCCC-----CCCcCHHHHHHH
Confidence            99987653      4689999999999988753211        011111111110   1121     235789999999


Q ss_pred             HHHHhcCC--CCCCCeeEecccccc
Q 023205          259 AVRAATDP--VFPPGIVDVHGILRY  281 (286)
Q Consensus       259 ~~~~l~~~--~~~~~~~~l~~~~~~  281 (286)
                      ++.++..+  ...|+.|++.|+...
T Consensus       244 ~~~l~s~~~~~~tG~~~~vdgg~~~  268 (285)
T 2p91_A          244 AVFLCSDWARAITGEVVHVDNGYHI  268 (285)
T ss_dssp             HHHHTSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHcCCcccCCCCCEEEECCCccc
Confidence            99998653  235889999887543

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=99.89  E-value=1.6e-22  Score=171.12  Aligned_cols=210  Identities=16%  Similarity=0.113  Sum_probs=153.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc--cccCCceeEEeccCCCHhHHHHHhc------CCCEEEE
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSWANNVIWHQGNLLSSDSWKEALD------GVTAVIS  127 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~--~~~~~~~~~i~~Dl~d~~~~~~~~~------~~d~vi~  127 (286)
                      .++++||||+|+||++++++|+++|++|++++|+.++...  +....++.++.+|++|.++++++++      ++|++||
T Consensus        30 ~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~id~lv~  109 (281)
T 3ppi_A           30 GASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELGNRAEFVSTNVTSEDSVLAAIEAANQLGRLRYAVV  109 (281)
T ss_dssp             TEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHTTSSEEEEEEE
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhCCCCeEEE
Confidence            5689999999999999999999999999999998654211  2224579999999999999888775      5799999


Q ss_pred             ccc-cCCC---------------cchhhhhhhHHHHHHHHHHHHc----------CCCEEEEEecCCcCCCCccccchHH
Q 023205          128 CVG-GFGS---------------NSYMYKINGTANINAIRAASEK----------GVKRFVYISAADFGVANYLLQGYYE  181 (286)
Q Consensus       128 ~a~-~~~~---------------~~~~~~~~~~~~~~l~~~a~~~----------~v~~~v~~Ss~~~~~~~~~~~~y~~  181 (286)
                      |++ ....               ....+++|+.++.++++++...          +..+||++||............|+.
T Consensus       110 ~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a  189 (281)
T 3ppi_A          110 AHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYEGQIGQTAYAA  189 (281)
T ss_dssp             CCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGGTSCCTTCHHHHH
T ss_pred             ccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecccccCCCCCCcccHH
Confidence            944 3210               1356789999999998887532          2348999999643333445678999


Q ss_pred             HHHHHHHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHH
Q 023205          182 GKRAAETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVV  255 (286)
Q Consensus       182 sK~~~E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dv  255 (286)
                      +|...+.+.+.      ..|+++++++||.+..+.....        .  .+.......   ..+.    ...+.+++|+
T Consensus       190 sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~--------~--~~~~~~~~~---~~~~----~~~~~~pedv  252 (281)
T 3ppi_A          190 AKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIMESV--------G--EEALAKFAA---NIPF----PKRLGTPDEF  252 (281)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTT--------C--HHHHHHHHH---TCCS----SSSCBCHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchhhhcc--------c--HHHHHHHHh---cCCC----CCCCCCHHHH
Confidence            99999886642      4689999999999965422110        0  011111111   1111    1347899999


Q ss_pred             HHHHHHHhcCCCCCCCeeEeccccccc
Q 023205          256 AKVAVRAATDPVFPPGIVDVHGILRYS  282 (286)
Q Consensus       256 a~~~~~~l~~~~~~~~~~~l~~~~~~s  282 (286)
                      |++++.++.++...|+++++.|+..++
T Consensus       253 A~~v~~l~s~~~~tG~~i~vdGG~~~~  279 (281)
T 3ppi_A          253 ADAAAFLLTNGYINGEVMRLDGAQRFT  279 (281)
T ss_dssp             HHHHHHHHHCSSCCSCEEEESTTCCCC
T ss_pred             HHHHHHHHcCCCcCCcEEEECCCcccC
Confidence            999999998877789999999988765

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=99.89  E-value=5.7e-22  Score=166.46  Aligned_cols=206  Identities=15%  Similarity=0.110  Sum_probs=149.8

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc------cccCCceeEEeccCCCHhHHHHHhc-------
Q 023205           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD-------  120 (286)
Q Consensus        54 ~~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~------~~~~~~~~~i~~Dl~d~~~~~~~~~-------  120 (286)
                      .+.++|+||||+|+||++++++|+++|++|+++.++......      .....++.++.+|++|+++++++++       
T Consensus        24 l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g  103 (267)
T 4iiu_A           24 AMSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQHG  103 (267)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            346789999999999999999999999999887755432111      1124578999999999999888775       


Q ss_pred             CCCEEEEccccCCC----------cchhhhhhhHHHHHHHHHHH-----HcCCCEEEEEecCCcCCCCccccchHHHHHH
Q 023205          121 GVTAVISCVGGFGS----------NSYMYKINGTANINAIRAAS-----EKGVKRFVYISAADFGVANYLLQGYYEGKRA  185 (286)
Q Consensus       121 ~~d~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~-----~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~  185 (286)
                      .+|+||||||....          ....+++|+.++.++++++.     +.+..+||++||...-........|+.+|..
T Consensus       104 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa  183 (267)
T 4iiu_A          104 AWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVMGNRGQVNYSAAKAG  183 (267)
T ss_dssp             CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHHCCTTCHHHHHHHHH
T ss_pred             CccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhccCCCCCchhHHHHHH
Confidence            68999999997532          13567899999999988763     4556799999995322223456789999998


Q ss_pred             HHHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHH
Q 023205          186 AETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVA  259 (286)
Q Consensus       186 ~E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~  259 (286)
                      .+.+.+.      ..|+++++++||.+.++.....           .+.......   ..|.     ..+.+++|+|+++
T Consensus       184 ~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-----------~~~~~~~~~---~~p~-----~~~~~~edva~~~  244 (267)
T 4iiu_A          184 IIGATKALAIELAKRKITVNCIAPGLIDTGMIEME-----------ESALKEAMS---MIPM-----KRMGQAEEVAGLA  244 (267)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCCC-----------HHHHHHHHH---TCTT-----CSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHhhcCeEEEEEEEeeecCCccccc-----------HHHHHHHHh---cCCC-----CCCcCHHHHHHHH
Confidence            8876642      4589999999999987654211           111111111   1121     2467899999999


Q ss_pred             HHHhcCC--CCCCCeeEeccc
Q 023205          260 VRAATDP--VFPPGIVDVHGI  278 (286)
Q Consensus       260 ~~~l~~~--~~~~~~~~l~~~  278 (286)
                      +.++..+  ...|+++++.|+
T Consensus       245 ~~L~s~~~~~itG~~i~vdGG  265 (267)
T 4iiu_A          245 SYLMSDIAGYVTRQVISINGG  265 (267)
T ss_dssp             HHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHhCCcccCccCCEEEeCCC
Confidence            9999753  356899999886

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=99.89  E-value=1.6e-21  Score=164.03  Aligned_cols=217  Identities=14%  Similarity=0.054  Sum_probs=154.2

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc------cccCCceeEEeccCCCHhHHHHHhc-------C
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD-------G  121 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~------~~~~~~~~~i~~Dl~d~~~~~~~~~-------~  121 (286)
                      ..+++|||||+|+||++++++|+++|++|+++.|+..+...      .....++.++.+|++|+++++++++       .
T Consensus        17 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   96 (270)
T 3is3_A           17 DGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHFGH   96 (270)
T ss_dssp             TTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            46799999999999999999999999999998876543211      1124578999999999999888775       6


Q ss_pred             CCEEEEccccCCC----------cchhhhhhhHHHHHHHHHHHHcCCC--EEEEEecCC-cCCCCccccchHHHHHHHHH
Q 023205          122 VTAVISCVGGFGS----------NSYMYKINGTANINAIRAASEKGVK--RFVYISAAD-FGVANYLLQGYYEGKRAAET  188 (286)
Q Consensus       122 ~d~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~~~~v~--~~v~~Ss~~-~~~~~~~~~~y~~sK~~~E~  188 (286)
                      +|++|||||....          ....+++|+.++.++++++.....+  +||++||.. ..........|+.+|...+.
T Consensus        97 id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~~  176 (270)
T 3is3_A           97 LDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNTSKDFSVPKHSLYSGSKGAVDS  176 (270)
T ss_dssp             CCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTTTTTCCCTTCHHHHHHHHHHHH
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCchhccCCCCCCchhHHHHHHHHH
Confidence            8999999997532          2356789999999999999876544  999999964 33334456789999999998


Q ss_pred             HHHH------hCCCcEEEEeeCeeecCCCCCcc--ccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHH
Q 023205          189 ELLT------RYPYGGVILRPGFIYGTRTVGGM--KLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAV  260 (286)
Q Consensus       189 ~~~~------~~g~~~~ilRp~~v~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~  260 (286)
                      +.+.      ..|+++++++||.+..+......  ..+....... +........  ..|     ...+.+++|+|++++
T Consensus       177 ~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~p-----~~r~~~p~dvA~~v~  248 (270)
T 3is3_A          177 FVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTA-EQRQQMAAH--ASP-----LHRNGWPQDVANVVG  248 (270)
T ss_dssp             HHHHHHHHHGGGTCEEEEEEECSBCSTTHHHHGGGGSTTGGGSCH-HHHHHHHHH--HST-----TCSCBCHHHHHHHHH
T ss_pred             HHHHHHHHhcccCeEEEEEEeCCccChhhhhhhhhccccccccch-HHHHHHHHh--cCC-----CCCCCCHHHHHHHHH
Confidence            7653      46899999999999876432100  0000000000 111111110  111     134678999999999


Q ss_pred             HHhcCC--CCCCCeeEecccc
Q 023205          261 RAATDP--VFPPGIVDVHGIL  279 (286)
Q Consensus       261 ~~l~~~--~~~~~~~~l~~~~  279 (286)
                      .++...  ...|+++++.|+.
T Consensus       249 ~L~s~~~~~itG~~i~vdGG~  269 (270)
T 3is3_A          249 FLVSKEGEWVNGKVLTLDGGA  269 (270)
T ss_dssp             HHTSGGGTTCCSCEEEESTTC
T ss_pred             HHcCCccCCccCcEEEeCCCC
Confidence            999653  3568999998863

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=99.89  E-value=3.9e-22  Score=166.25  Aligned_cols=218  Identities=14%  Similarity=0.157  Sum_probs=153.6

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCC--CeEEEEecCCCcccc--cccCCceeEEeccCCCHhHHHHHhc-------CCC
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRG--LTVASLSRSGRSSLR--DSWANNVIWHQGNLLSSDSWKEALD-------GVT  123 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g--~~V~~l~R~~~~~~~--~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d  123 (286)
                      |.++++||||+|+||++++++|+++|  +.|+++.|+.++...  +....++.++.+|++|+++++++++       .+|
T Consensus         1 Mgk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id   80 (254)
T 3kzv_A            1 MGKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDRFFYVVGDITEDSVLKQLVNAAVKGHGKID   80 (254)
T ss_dssp             -CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHHGGGEEEEESCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHhcCCcc
Confidence            45789999999999999999999985  789888888644211  1123578999999999998888775       689


Q ss_pred             EEEEccccCCC-----------cchhhhhhhHHHHHHHHHH----HHcCCCEEEEEecCCcCCCCccccchHHHHHHHHH
Q 023205          124 AVISCVGGFGS-----------NSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKRAAET  188 (286)
Q Consensus       124 ~vi~~a~~~~~-----------~~~~~~~~~~~~~~l~~~a----~~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~  188 (286)
                      ++|||||....           ....+++|+.++.++++++    ++.+ .+||++||............|+.+|...+.
T Consensus        81 ~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-g~iv~isS~~~~~~~~~~~~Y~asK~a~~~  159 (254)
T 3kzv_A           81 SLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTN-GNVVFVSSDACNMYFSSWGAYGSSKAALNH  159 (254)
T ss_dssp             EEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCSCCCCSSCCSHHHHHHHHHHHH
T ss_pred             EEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEcCchhccCCCCcchHHHHHHHHHH
Confidence            99999997421           1346789999999998887    4445 699999996433344556789999999998


Q ss_pred             HHHH----hCCCcEEEEeeCeeecCCCCCcccc--CccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHH
Q 023205          189 ELLT----RYPYGGVILRPGFIYGTRTVGGMKL--PLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRA  262 (286)
Q Consensus       189 ~~~~----~~g~~~~ilRp~~v~g~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~  262 (286)
                      +.+.    ..|+++++++||.+..+........  +........+.+...      .|     ...+.+++|+|++++.+
T Consensus       160 ~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~------~~-----~~r~~~p~dva~~v~~L  228 (254)
T 3kzv_A          160 FAMTLANEERQVKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQLKMFRGL------KE-----NNQLLDSSVPATVYAKL  228 (254)
T ss_dssp             HHHHHHHHCTTSEEEEEECSSCCCCCSCCCCCCCCTTTSCHHHHHHHHHH------HT-----TC----CHHHHHHHHHH
T ss_pred             HHHHHHhhccCcEEEEEeCCcccchhHHHhhcccCccccCHHHHHHHHHH------Hh-----cCCcCCcccHHHHHHHH
Confidence            7653    3589999999999987754322100  000001111111111      11     12467899999999999


Q ss_pred             hcCCC---CCCCeeEeccccccccc
Q 023205          263 ATDPV---FPPGIVDVHGILRYSQK  284 (286)
Q Consensus       263 l~~~~---~~~~~~~l~~~~~~s~~  284 (286)
                      +..+.   ..|+.+++.+++...+.
T Consensus       229 ~s~~~~~~itG~~i~vdg~~~~~~~  253 (254)
T 3kzv_A          229 ALHGIPDGVNGQYLSYNDPALADFM  253 (254)
T ss_dssp             HHHCCCGGGTTCEEETTCGGGGGGC
T ss_pred             HhhcccCCCCccEEEecCccccccC
Confidence            97653   57899999998876554

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=99.89  E-value=1.4e-22  Score=170.40  Aligned_cols=217  Identities=15%  Similarity=0.116  Sum_probs=152.2

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc-cccCCceeEEeccCCCHhHHHHHhc-------CCCEEE
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-DSWANNVIWHQGNLLSSDSWKEALD-------GVTAVI  126 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~-~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d~vi  126 (286)
                      ..++++||||+|+||++++++|+++|++|++++|+.++... .....++.++.+|++|+++++++++       ++|++|
T Consensus         8 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv   87 (270)
T 1yde_A            8 AGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCVV   87 (270)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCeEEEcCCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            35789999999999999999999999999999998644211 0112358899999999999888775       689999


Q ss_pred             EccccCCC-----------cchhhhhhhHHHHHHHHHHHH---cCCCEEEEEecCCcCCCCccccchHHHHHHHHHHHHH
Q 023205          127 SCVGGFGS-----------NSYMYKINGTANINAIRAASE---KGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLT  192 (286)
Q Consensus       127 ~~a~~~~~-----------~~~~~~~~~~~~~~l~~~a~~---~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~~  192 (286)
                      ||||....           ....+++|+.++.++++++..   .+..+||++||............|+.+|...+.+.+.
T Consensus        88 ~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~  167 (270)
T 1yde_A           88 NNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIGQAQAVPYVATKGAVTAMTKA  167 (270)
T ss_dssp             ECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHCCTTCHHHHHHHHHHHHHHHH
T ss_pred             ECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEEEEcCccccCCCCCCcccHHHHHHHHHHHHH
Confidence            99986431           135678999999999888753   1247999999952111223456799999999987653


Q ss_pred             ------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcCC
Q 023205          193 ------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDP  266 (286)
Q Consensus       193 ------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~  266 (286)
                            ..|+++++++||.++++.......    ........+....   ...|.     ..+...+|+|++++.++...
T Consensus       168 la~e~~~~gi~vn~v~Pg~v~t~~~~~~~~----~~~~~~~~~~~~~---~~~p~-----~r~~~p~dva~~v~~L~s~~  235 (270)
T 1yde_A          168 LALDESPYGVRVNCISPGNIWTPLWEELAA----LMPDPRASIREGM---LAQPL-----GRMGQPAEVGAAAVFLASEA  235 (270)
T ss_dssp             HHHHHGGGTCEEEEEEECSBCCHHHHHHHT----TSSSHHHHHHHHH---HTSTT-----SSCBCHHHHHHHHHHHHHHC
T ss_pred             HHHHhhhhCcEEEEEEeCccccchhhhhhh----cccchHHHHHHHh---hcCCC-----CCCcCHHHHHHHHHHHcccC
Confidence                  468999999999998763210000    0001111111110   01222     23578999999999988653


Q ss_pred             -CCCCCeeEecccccccc
Q 023205          267 -VFPPGIVDVHGILRYSQ  283 (286)
Q Consensus       267 -~~~~~~~~l~~~~~~s~  283 (286)
                       ...|+.+.+.|+..+++
T Consensus       236 ~~itG~~i~vdGG~~~~~  253 (270)
T 1yde_A          236 NFCTGIELLVTGGAELGY  253 (270)
T ss_dssp             TTCCSCEEEESTTTTSCC
T ss_pred             CCcCCCEEEECCCeeccc
Confidence             34688999999866543

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=99.89  E-value=4.3e-22  Score=167.03  Aligned_cols=211  Identities=13%  Similarity=0.048  Sum_probs=151.3

Q ss_pred             CCeEEEEcCC--ChhHHHHHHHHHHCCCeEEEEecCCCcc--cccc--cCCceeEEeccCCCHhHHHHHhc-------CC
Q 023205           56 SEKLLVLGGN--GFVGSHICREALDRGLTVASLSRSGRSS--LRDS--WANNVIWHQGNLLSSDSWKEALD-------GV  122 (286)
Q Consensus        56 ~~~VlVtGat--G~iG~~l~~~Ll~~g~~V~~l~R~~~~~--~~~~--~~~~~~~i~~Dl~d~~~~~~~~~-------~~  122 (286)
                      .++|+||||+  |+||++++++|+++|++|++++|+....  ..+.  ......++.+|++|+++++++++       ++
T Consensus         9 ~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   88 (265)
T 1qsg_A            9 GKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWPKF   88 (265)
T ss_dssp             TCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCSSE
T ss_pred             CCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            4689999999  9999999999999999999999986211  0110  11245789999999999888775       68


Q ss_pred             CEEEEccccCCC---------------cchhhhhhhHHHHHHHHHHHHcCC--CEEEEEecCCcCCCCccccchHHHHHH
Q 023205          123 TAVISCVGGFGS---------------NSYMYKINGTANINAIRAASEKGV--KRFVYISAADFGVANYLLQGYYEGKRA  185 (286)
Q Consensus       123 d~vi~~a~~~~~---------------~~~~~~~~~~~~~~l~~~a~~~~v--~~~v~~Ss~~~~~~~~~~~~y~~sK~~  185 (286)
                      |+||||||....               ....+++|+.++.++++++.....  .+||++||............|+.+|..
T Consensus        89 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a  168 (265)
T 1qsg_A           89 DGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNVMGLAKAS  168 (265)
T ss_dssp             EEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTTTTHHHHHHHH
T ss_pred             CEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEcchhhccCCCCchHHHHHHHH
Confidence            999999986431               124568999999999999976522  489999995322233445679999999


Q ss_pred             HHHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHH
Q 023205          186 AETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVA  259 (286)
Q Consensus       186 ~E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~  259 (286)
                      .+.+.+.      ..|+++++++||.+.++.....        ....+.......   ..|.     ..+.+++|+|+++
T Consensus       169 ~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~--------~~~~~~~~~~~~---~~p~-----~~~~~~~dva~~v  232 (265)
T 1qsg_A          169 LEANVRYMANAMGPEGVRVNAISAGPIRTLAASGI--------KDFRKMLAHCEA---VTPI-----RRTVTIEDVGNSA  232 (265)
T ss_dssp             HHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGS--------TTHHHHHHHHHH---HSTT-----SSCCCHHHHHHHH
T ss_pred             HHHHHHHHHHHhhhcCeEEEEEEeCCCccchhhcc--------cccHHHHHHHHh---cCCC-----CCCCCHHHHHHHH
Confidence            9987753      3589999999999988753211        011111111111   1121     2367999999999


Q ss_pred             HHHhcCCC--CCCCeeEeccccccc
Q 023205          260 VRAATDPV--FPPGIVDVHGILRYS  282 (286)
Q Consensus       260 ~~~l~~~~--~~~~~~~l~~~~~~s  282 (286)
                      +.++..+.  ..|+.|++.|+..++
T Consensus       233 ~~l~s~~~~~~tG~~~~vdgG~~~~  257 (265)
T 1qsg_A          233 AFLCSDLSAGISGEVVHVDGGFSIA  257 (265)
T ss_dssp             HHHTSGGGTTCCSCEEEESTTGGGB
T ss_pred             HHHhCchhcCccCCEEEECCCcCCC
Confidence            99987532  358899999987654

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=99.89  E-value=9e-22  Score=167.68  Aligned_cols=214  Identities=12%  Similarity=-0.030  Sum_probs=155.9

Q ss_pred             CCCeEEEEcCCC--hhHHHHHHHHHHCCCeEEEEecCCCcccc--c--ccCCceeEEeccCCCHhHHHHHhc-------C
Q 023205           55 PSEKLLVLGGNG--FVGSHICREALDRGLTVASLSRSGRSSLR--D--SWANNVIWHQGNLLSSDSWKEALD-------G  121 (286)
Q Consensus        55 ~~~~VlVtGatG--~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~--~--~~~~~~~~i~~Dl~d~~~~~~~~~-------~  121 (286)
                      ..++++||||+|  +||++++++|+++|++|++++|+.+....  +  .....+.++.+|++|+++++++++       +
T Consensus        29 ~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  108 (296)
T 3k31_A           29 EGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLAEEWGS  108 (296)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            357899999997  99999999999999999999998543111  0  112357899999999999888775       5


Q ss_pred             CCEEEEccccCCC--------------cchhhhhhhHHHHHHHHHHHHcCC--CEEEEEecCCcCCCCccccchHHHHHH
Q 023205          122 VTAVISCVGGFGS--------------NSYMYKINGTANINAIRAASEKGV--KRFVYISAADFGVANYLLQGYYEGKRA  185 (286)
Q Consensus       122 ~d~vi~~a~~~~~--------------~~~~~~~~~~~~~~l~~~a~~~~v--~~~v~~Ss~~~~~~~~~~~~y~~sK~~  185 (286)
                      +|++|||||....              ....+++|+.++.++++++.....  .+||++||............|+.+|..
T Consensus       109 iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~~~~~~~~~~~~Y~asKaa  188 (296)
T 3k31_A          109 LDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYYGAEKVVPHYNVMGVCKAA  188 (296)
T ss_dssp             CSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSCCTTTTHHHHHHHH
T ss_pred             CCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEehhhccCCCCchhhHHHHHH
Confidence            7999999986531              135678999999999999876543  389999995433334456789999999


Q ss_pred             HHHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHH
Q 023205          186 AETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVA  259 (286)
Q Consensus       186 ~E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~  259 (286)
                      .+.+.+.      ..|+++++|+||.+..+.....        ............   ..|.     ..+...+|+|+++
T Consensus       189 l~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~--------~~~~~~~~~~~~---~~p~-----~r~~~pedvA~~v  252 (296)
T 3k31_A          189 LEASVKYLAVDLGKQQIRVNAISAGPVRTLASSGI--------SDFHYILTWNKY---NSPL-----RRNTTLDDVGGAA  252 (296)
T ss_dssp             HHHHHHHHHHHHHTTTEEEEEEEECCCCCSSCCSC--------HHHHHHHHHHHH---HSTT-----SSCCCHHHHHHHH
T ss_pred             HHHHHHHHHHHHhhcCcEEEEEEECCCcCchhhcc--------cchHHHHHHHHh---cCCC-----CCCCCHHHHHHHH
Confidence            9987653      4689999999999987653221        001111111111   1121     2457899999999


Q ss_pred             HHHhcC--CCCCCCeeEeccccccccc
Q 023205          260 VRAATD--PVFPPGIVDVHGILRYSQK  284 (286)
Q Consensus       260 ~~~l~~--~~~~~~~~~l~~~~~~s~~  284 (286)
                      +.++..  ....|+++++.|+..+.+-
T Consensus       253 ~fL~s~~a~~itG~~i~vdGG~~~~~~  279 (296)
T 3k31_A          253 LYLLSDLGRGTTGETVHVDCGYHVVGM  279 (296)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTGGGCSS
T ss_pred             HHHcCCccCCccCCEEEECCCccccCC
Confidence            999975  3356899999998877653

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.89  E-value=4.2e-22  Score=165.55  Aligned_cols=206  Identities=19%  Similarity=0.132  Sum_probs=143.3

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCC-CHhHHHHHhcCCCEEEEcccc
Q 023205           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLL-SSDSWKEALDGVTAVISCVGG  131 (286)
Q Consensus        53 ~~~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~-d~~~~~~~~~~~d~vi~~a~~  131 (286)
                      ....++|+||||+|+||++++++|+++|++|++++|+.+. ..+.  ..+.++ +|+. +.+.+.+.+.++|+||||||.
T Consensus        16 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~-~~~~--~~~~~~-~D~~~~~~~~~~~~~~iD~lv~~Ag~   91 (249)
T 1o5i_A           16 GIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEEL-LKRS--GHRYVV-CDLRKDLDLLFEKVKEVDILVLNAGG   91 (249)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHH-HHHT--CSEEEE-CCTTTCHHHHHHHSCCCSEEEECCCC
T ss_pred             ccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHH-HHhh--CCeEEE-eeHHHHHHHHHHHhcCCCEEEECCCC
Confidence            3456899999999999999999999999999999998632 1111  356677 9992 223333344489999999986


Q ss_pred             CCC----------cchhhhhhhHHHHHHHHH----HHHcCCCEEEEEecCCcCCCCccccchHHHHHHHHHHHHH-----
Q 023205          132 FGS----------NSYMYKINGTANINAIRA----ASEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLT-----  192 (286)
Q Consensus       132 ~~~----------~~~~~~~~~~~~~~l~~~----a~~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~~-----  192 (286)
                      ...          ....+++|+.++.++.++    +++.+.++||++||............|+.+|...+.+.+.     
T Consensus        92 ~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~  171 (249)
T 1o5i_A           92 PKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIENLYTSNSARMALTGFLKTLSFEV  171 (249)
T ss_dssp             CCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchHhcCCCCCCchHHHHHHHHHHHHHHHHHHh
Confidence            432          124568899887766544    4556778999999954333334567899999999986653     


Q ss_pred             -hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcCC--CCC
Q 023205          193 -RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDP--VFP  269 (286)
Q Consensus       193 -~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~--~~~  269 (286)
                       ..|+++++++||.+.++.....       .......  ...   ...|.     ..+++++|+|++++.++..+  ...
T Consensus       172 ~~~gi~v~~v~Pg~v~t~~~~~~-------~~~~~~~--~~~---~~~p~-----~~~~~~~dvA~~i~~l~s~~~~~~t  234 (249)
T 1o5i_A          172 APYGITVNCVAPGWTETERVKEL-------LSEEKKK--QVE---SQIPM-----RRMAKPEEIASVVAFLCSEKASYLT  234 (249)
T ss_dssp             GGGTEEEEEEEECSBCCTTHHHH-------SCHHHHH--HHH---TTSTT-----SSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             hhcCeEEEEEeeCCCccCccccc-------chhhHHH--HHH---hcCCC-----CCCcCHHHHHHHHHHHcCccccCCC
Confidence             4689999999999987753110       0111110  111   11222     34789999999999998753  245


Q ss_pred             CCeeEecccc
Q 023205          270 PGIVDVHGIL  279 (286)
Q Consensus       270 ~~~~~l~~~~  279 (286)
                      |+.|++.|+.
T Consensus       235 G~~~~vdgG~  244 (249)
T 1o5i_A          235 GQTIVVDGGL  244 (249)
T ss_dssp             SCEEEESTTC
T ss_pred             CCEEEECCCc
Confidence            8899998874

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=99.89  E-value=1.9e-22  Score=167.42  Aligned_cols=208  Identities=15%  Similarity=0.139  Sum_probs=151.6

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc--cccCCceeEEeccCCCHhHHHHHhc-------CCCEE
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSWANNVIWHQGNLLSSDSWKEALD-------GVTAV  125 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~--~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d~v  125 (286)
                      ..++++||||+|+||++++++|+++|++|++++|+.++...  .....++.++.+|++|+++++++++       ++|++
T Consensus         5 ~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l   84 (247)
T 3rwb_A            5 AGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAIAADISDPGSVKALFAEIQALTGGIDIL   84 (247)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEECCCCTTCHHHHHHHHHHHHHHHSCCSEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEE
Confidence            36799999999999999999999999999999998654211  1224578999999999998888776       68999


Q ss_pred             EEccccCCC----------cchhhhhhhHHHHHHHHHH----HHcC-CCEEEEEecCCcCCCCccccchHHHHHHHHHHH
Q 023205          126 ISCVGGFGS----------NSYMYKINGTANINAIRAA----SEKG-VKRFVYISAADFGVANYLLQGYYEGKRAAETEL  190 (286)
Q Consensus       126 i~~a~~~~~----------~~~~~~~~~~~~~~l~~~a----~~~~-v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~  190 (286)
                      |||||....          ....+++|+.++.++.+++    ++.+ ..+||++||............|+.+|...+.+.
T Consensus        85 v~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~  164 (247)
T 3rwb_A           85 VNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGTPNMAAYVAAKGGVIGFT  164 (247)
T ss_dssp             EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHTCTTCHHHHHHHHHHHHHH
T ss_pred             EECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhccCCCCchhhHHHHHHHHHHH
Confidence            999996532          2356789999999888874    4444 569999999533233345678999999998866


Q ss_pred             HH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhc
Q 023205          191 LT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAAT  264 (286)
Q Consensus       191 ~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~  264 (286)
                      +.      ..|+++++++||.+..+.....   +    ......+.....     |     ...+.+++|+|++++.++.
T Consensus       165 ~~la~e~~~~gi~vn~v~PG~v~t~~~~~~---~----~~~~~~~~~~~~-----~-----~~r~~~pedva~~v~~L~s  227 (247)
T 3rwb_A          165 RALATELGKYNITANAVTPGLIESDGVKAS---P----HNEAFGFVEMLQ-----A-----MKGKGQPEHIADVVSFLAS  227 (247)
T ss_dssp             HHHHHHHGGGTEEEEEEEECSBCCHHHHTS---G----GGGGHHHHHHHS-----S-----SCSCBCHHHHHHHHHHHHS
T ss_pred             HHHHHHhhhcCeEEEEEeeCcCcCcccccc---C----hhHHHHHHhccc-----c-----cCCCcCHHHHHHHHHHHhC
Confidence            53      4689999999999976532111   0    001111111111     1     1235789999999999997


Q ss_pred             CC--CCCCCeeEecccc
Q 023205          265 DP--VFPPGIVDVHGIL  279 (286)
Q Consensus       265 ~~--~~~~~~~~l~~~~  279 (286)
                      .+  ...|+++++.|+.
T Consensus       228 ~~~~~itG~~i~vdGG~  244 (247)
T 3rwb_A          228 DDARWITGQTLNVDAGM  244 (247)
T ss_dssp             GGGTTCCSCEEEESTTS
T ss_pred             ccccCCCCCEEEECCCc
Confidence            54  3468999998864

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=99.89  E-value=1.4e-21  Score=165.50  Aligned_cols=218  Identities=17%  Similarity=0.078  Sum_probs=152.1

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc------cccCCceeEEeccCCCHhHHHHHhc-------C
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD-------G  121 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~------~~~~~~~~~i~~Dl~d~~~~~~~~~-------~  121 (286)
                      ..++++||||+|+||++++++|+++|++|++++|+..+...      .....++.++.+|++|.+++.++++       +
T Consensus        28 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  107 (283)
T 1g0o_A           28 EGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGK  107 (283)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            35789999999999999999999999999999998643211      1123478899999999988877664       6


Q ss_pred             CCEEEEccccCCC----------cchhhhhhhHHHHHHHHHHHHc--CCCEEEEEecCCcCCCCc-cccchHHHHHHHHH
Q 023205          122 VTAVISCVGGFGS----------NSYMYKINGTANINAIRAASEK--GVKRFVYISAADFGVANY-LLQGYYEGKRAAET  188 (286)
Q Consensus       122 ~d~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~~~--~v~~~v~~Ss~~~~~~~~-~~~~y~~sK~~~E~  188 (286)
                      +|+||||||....          ....+++|+.++.++++++.+.  +..+||++||........ ....|+.+|...|.
T Consensus       108 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~asK~a~~~  187 (283)
T 1g0o_A          108 LDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKAVPKHAVYSGSKGAIET  187 (283)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCSSCSSCHHHHHHHHHHHH
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEechhhccCCCCCCcchHHHHHHHHH
Confidence            8999999996532          1356789999999999999875  557999999953222222 36789999999998


Q ss_pred             HHHH------hCCCcEEEEeeCeeecCCCCCccc--cCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHH
Q 023205          189 ELLT------RYPYGGVILRPGFIYGTRTVGGMK--LPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAV  260 (286)
Q Consensus       189 ~~~~------~~g~~~~ilRp~~v~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~  260 (286)
                      +.+.      ..|+++++++||.+.++.......  .+...... .+........ ...|     ...+.+++|+|++++
T Consensus       188 ~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~p-----~~r~~~p~dvA~~v~  260 (283)
T 1g0o_A          188 FARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLS-NEEVDEYAAV-QWSP-----LRRVGLPIDIARVVC  260 (283)
T ss_dssp             HHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCC-HHHHHHHHHH-HSCT-----TCSCBCHHHHHHHHH
T ss_pred             HHHHHHHHhcccCeEEEEEecCcccchhhhhhhhhccccccccC-HHHHHHHHhh-cCCC-----CCCCcCHHHHHHHHH
Confidence            7753      468999999999997653211000  00000000 0111111000 0111     124689999999999


Q ss_pred             HHhcCCC--CCCCeeEecccc
Q 023205          261 RAATDPV--FPPGIVDVHGIL  279 (286)
Q Consensus       261 ~~l~~~~--~~~~~~~l~~~~  279 (286)
                      .++..+.  ..|+++++.|+.
T Consensus       261 ~l~s~~~~~itG~~i~vdgG~  281 (283)
T 1g0o_A          261 FLASNDGGWVTGKVIGIDGGA  281 (283)
T ss_dssp             HHHSGGGTTCCSCEEEESTTC
T ss_pred             HHhCccccCcCCCEEEeCCCc
Confidence            9997543  468899998874

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=99.89  E-value=1.4e-22  Score=174.74  Aligned_cols=155  Identities=19%  Similarity=0.185  Sum_probs=120.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc----------cccCCceeEEeccCCCHhHHHHHhc-----
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR----------DSWANNVIWHQGNLLSSDSWKEALD-----  120 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~----------~~~~~~~~~i~~Dl~d~~~~~~~~~-----  120 (286)
                      +++|+||||+|+||++++++|+++|++|++.+|+......          .....++.++.+|++|+++++++++     
T Consensus         5 ~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~   84 (324)
T 3u9l_A            5 KKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQIIGE   84 (324)
T ss_dssp             CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHH
Confidence            4689999999999999999999999999999997432111          1123578999999999999888876     


Q ss_pred             --CCCEEEEccccCCC----------cchhhhhhhHHHHHHHHHH----HHcCCCEEEEEecCC-cCCCCccccchHHHH
Q 023205          121 --GVTAVISCVGGFGS----------NSYMYKINGTANINAIRAA----SEKGVKRFVYISAAD-FGVANYLLQGYYEGK  183 (286)
Q Consensus       121 --~~d~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a----~~~~v~~~v~~Ss~~-~~~~~~~~~~y~~sK  183 (286)
                        ++|+||||||....          ....+++|+.++.++++++    ++.+..+||++||.. +.........|+.+|
T Consensus        85 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g~iV~isS~~~~~~~~~~~~~Y~asK  164 (324)
T 3u9l_A           85 DGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQKHGLLIWISSSSSAGGTPPYLAPYFAAK  164 (324)
T ss_dssp             HSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCCSSCHHHHHHH
T ss_pred             cCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEecchhccCCCCcchhHHHHH
Confidence              79999999996421          1356799999999999988    566778999999953 222233456799999


Q ss_pred             HHHHHHHHH------hCCCcEEEEeeCeeecCC
Q 023205          184 RAAETELLT------RYPYGGVILRPGFIYGTR  210 (286)
Q Consensus       184 ~~~E~~~~~------~~g~~~~ilRp~~v~g~~  210 (286)
                      ...|.+.+.      ..|+++++|+||.+.++.
T Consensus       165 aa~~~~~~~la~el~~~gI~v~~v~PG~v~t~~  197 (324)
T 3u9l_A          165 AAMDAIAVQYARELSRWGIETSIIVPGAFTSGT  197 (324)
T ss_dssp             HHHHHHHHHHHHHHHTTTEEEEEEEECCC----
T ss_pred             HHHHHHHHHHHHHhhhhCcEEEEEECCccccCc
Confidence            999987753      469999999999997654

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=99.89  E-value=2e-22  Score=168.00  Aligned_cols=210  Identities=14%  Similarity=0.152  Sum_probs=148.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc--cccCCceeEEeccCCCHhHHHHHhc-------CCCEEE
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSWANNVIWHQGNLLSSDSWKEALD-------GVTAVI  126 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~--~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d~vi  126 (286)
                      .++|+||||+|+||++++++|+++|++|++++|+.++...  +....++.++++|++|+++++++++       .+|+||
T Consensus         6 ~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv   85 (253)
T 1hxh_A            6 GKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNVLV   85 (253)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCEEE
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            5789999999999999999999999999999998643211  1113578899999999998887775       469999


Q ss_pred             EccccCCC----------cchhhhhhhHHHHHHHHHH----HHcCCCEEEEEecCCcCCCCccccchHHHHHHHHHHHHH
Q 023205          127 SCVGGFGS----------NSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLT  192 (286)
Q Consensus       127 ~~a~~~~~----------~~~~~~~~~~~~~~l~~~a----~~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~~  192 (286)
                      ||||....          ....+++|+.++..+.+++    ++.+ .+||++||............|+.+|...|.+.+.
T Consensus        86 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~  164 (253)
T 1hxh_A           86 NNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-GSIINMASVSSWLPIEQYAGYSASKAAVSALTRA  164 (253)
T ss_dssp             ECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-EEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHH
T ss_pred             ECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC-CEEEEEcchhhcCCCCCCccHHHHHHHHHHHHHH
Confidence            99996532          1345688988877666654    3455 7999999954333334567899999999987653


Q ss_pred             ------hC--CCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhc
Q 023205          193 ------RY--PYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAAT  264 (286)
Q Consensus       193 ------~~--g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~  264 (286)
                            ..  |++++++|||.++++......  +    .......  ........|     ...+.+++|+|++++.++.
T Consensus       165 la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~--~----~~~~~~~--~~~~~~~~p-----~~~~~~~~dvA~~~~~l~s  231 (253)
T 1hxh_A          165 AALSCRKQGYAIRVNSIHPDGIYTPMMQASL--P----KGVSKEM--VLHDPKLNR-----AGRAYMPERIAQLVLFLAS  231 (253)
T ss_dssp             HHHHHHHHTCCEEEEEEEESEECCHHHHHHS--C----TTCCHHH--HBCBTTTBT-----TCCEECHHHHHHHHHHHHS
T ss_pred             HHHHhhhcCCCeEEEEEEeCCccCchhhhcc--c----hhhhHHH--HhhhhccCc-----cCCCCCHHHHHHHHHHHcC
Confidence                  23  899999999999876421100  0    0000000  000000112     1347899999999999997


Q ss_pred             CCC--CCCCeeEecccc
Q 023205          265 DPV--FPPGIVDVHGIL  279 (286)
Q Consensus       265 ~~~--~~~~~~~l~~~~  279 (286)
                      .+.  ..|+.+++.|+.
T Consensus       232 ~~~~~~tG~~~~vdgG~  248 (253)
T 1hxh_A          232 DESSVMSGSELHADNSI  248 (253)
T ss_dssp             GGGTTCCSCEEEESSSC
T ss_pred             ccccCCCCcEEEECCCc
Confidence            643  458899998874

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=99.89  E-value=9.2e-22  Score=165.94  Aligned_cols=207  Identities=13%  Similarity=0.092  Sum_probs=152.2

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc-----cccCCceeEEeccCCCHhHHHHHhc-------CC
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------GV  122 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~-----~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~  122 (286)
                      ..+++|||||+|+||++++++|+++|++|++++|+.+....     .....++.++++|++|+++++++++       ++
T Consensus        31 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~i  110 (276)
T 3r1i_A           31 SGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGELGGI  110 (276)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            45799999999999999999999999999999998655221     1123478999999999999888876       78


Q ss_pred             CEEEEccccCCC----------cchhhhhhhHHHHHHHHHHHH----cC-CCEEEEEecCCc--CCCCccccchHHHHHH
Q 023205          123 TAVISCVGGFGS----------NSYMYKINGTANINAIRAASE----KG-VKRFVYISAADF--GVANYLLQGYYEGKRA  185 (286)
Q Consensus       123 d~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~~----~~-v~~~v~~Ss~~~--~~~~~~~~~y~~sK~~  185 (286)
                      |++|||||....          ....+++|+.++.++++++..    .+ ..+||++||...  +....+...|+.+|..
T Consensus       111 D~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~~~~~~~~Y~asKaa  190 (276)
T 3r1i_A          111 DIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIINIPQQVSHYCTSKAA  190 (276)
T ss_dssp             SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCCSSCCHHHHHHHHH
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccCCCCCcchHHHHHHH
Confidence            999999997532          124568999999998888754    23 258999999532  2222345789999999


Q ss_pred             HHHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHH
Q 023205          186 AETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVA  259 (286)
Q Consensus       186 ~E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~  259 (286)
                      .+.+.+.      ..|+++++++||.+..+.....        ......+.      ..+|.     ..+.+++|+|+++
T Consensus       191 ~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~--------~~~~~~~~------~~~p~-----~r~~~pedvA~~v  251 (276)
T 3r1i_A          191 VVHLTKAMAVELAPHQIRVNSVSPGYIRTELVEPL--------ADYHALWE------PKIPL-----GRMGRPEELTGLY  251 (276)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGGG--------GGGHHHHG------GGSTT-----SSCBCGGGSHHHH
T ss_pred             HHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccccc--------hHHHHHHH------hcCCC-----CCCcCHHHHHHHH
Confidence            9987753      4689999999999987643211        11111111      11222     2467899999999


Q ss_pred             HHHhcCC--CCCCCeeEeccccc
Q 023205          260 VRAATDP--VFPPGIVDVHGILR  280 (286)
Q Consensus       260 ~~~l~~~--~~~~~~~~l~~~~~  280 (286)
                      +.++...  ...|+++++.|+..
T Consensus       252 ~fL~s~~~~~itG~~i~vdGG~~  274 (276)
T 3r1i_A          252 LYLASAASSYMTGSDIVIDGGYT  274 (276)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTTT
T ss_pred             HHHcCccccCccCcEEEECcCcc
Confidence            9999753  35689999988753

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=99.89  E-value=2.4e-21  Score=162.52  Aligned_cols=214  Identities=11%  Similarity=0.033  Sum_probs=155.3

Q ss_pred             CCCeEEEEcCCCh--hHHHHHHHHHHCCCeEEEEecCCCcccc------cccCCceeEEeccCCCHhHHHHHhc------
Q 023205           55 PSEKLLVLGGNGF--VGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD------  120 (286)
Q Consensus        55 ~~~~VlVtGatG~--iG~~l~~~Ll~~g~~V~~l~R~~~~~~~------~~~~~~~~~i~~Dl~d~~~~~~~~~------  120 (286)
                      ..++++||||+|+  ||++++++|+++|++|+++.|+......      .....++.++.+|++|+++++++++      
T Consensus         6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   85 (266)
T 3oig_A            6 EGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKEQV   85 (266)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHHHh
Confidence            3578999999988  9999999999999999999998542111      1112379999999999998887775      


Q ss_pred             -CCCEEEEccccCCC--------------cchhhhhhhHHHHHHHHHHHHcCC--CEEEEEecCCcCCCCccccchHHHH
Q 023205          121 -GVTAVISCVGGFGS--------------NSYMYKINGTANINAIRAASEKGV--KRFVYISAADFGVANYLLQGYYEGK  183 (286)
Q Consensus       121 -~~d~vi~~a~~~~~--------------~~~~~~~~~~~~~~l~~~a~~~~v--~~~v~~Ss~~~~~~~~~~~~y~~sK  183 (286)
                       .+|++|||||....              ....+++|+.++.++++++.....  .+||++||............|+.+|
T Consensus        86 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  165 (266)
T 3oig_A           86 GVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLGGELVMPNYNVMGVAK  165 (266)
T ss_dssp             SCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSCCTTTHHHHHHH
T ss_pred             CCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEecccccccCCCcchhHHHH
Confidence             58999999986531              124568999999999999876533  4899999954333334567899999


Q ss_pred             HHHHHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHH
Q 023205          184 RAAETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAK  257 (286)
Q Consensus       184 ~~~E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~  257 (286)
                      ...+.+.+.      ..|+++++++||.+..+.....        ....+.......   ..|.     ..+.+++|+|+
T Consensus       166 aa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~--------~~~~~~~~~~~~---~~~~-----~~~~~p~dva~  229 (266)
T 3oig_A          166 ASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKGI--------SDFNSILKDIEE---RAPL-----RRTTTPEEVGD  229 (266)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTC--------TTHHHHHHHHHH---HSTT-----SSCCCHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhcCcEEEEEecCcccccccccc--------cchHHHHHHHHh---cCCC-----CCCCCHHHHHH
Confidence            999987653      4689999999999986543221        111111111111   1111     24578999999


Q ss_pred             HHHHHhcCC--CCCCCeeEeccccccccc
Q 023205          258 VAVRAATDP--VFPPGIVDVHGILRYSQK  284 (286)
Q Consensus       258 ~~~~~l~~~--~~~~~~~~l~~~~~~s~~  284 (286)
                      +++.++..+  ...|+++++.|+....+.
T Consensus       230 ~v~~l~s~~~~~~tG~~i~vdGG~~~~~~  258 (266)
T 3oig_A          230 TAAFLFSDMSRGITGENLHVDSGFHITAR  258 (266)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTGGGCCC
T ss_pred             HHHHHcCCchhcCcCCEEEECCCeEEeee
Confidence            999999753  356899999998776654

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=99.89  E-value=2.1e-22  Score=164.65  Aligned_cols=198  Identities=14%  Similarity=0.106  Sum_probs=147.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhc---CCCEEEEccccC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD---GVTAVISCVGGF  132 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~---~~d~vi~~a~~~  132 (286)
                      .++++||||+|+||++++++|+++|++|++++|+.+               +|++|+++++++++   ++|++|||||..
T Consensus         6 ~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~---------------~D~~~~~~v~~~~~~~g~id~lv~nAg~~   70 (223)
T 3uce_A            6 KTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG---------------LDISDEKSVYHYFETIGAFDHLIVTAGSY   70 (223)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT---------------CCTTCHHHHHHHHHHHCSEEEEEECCCCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc---------------cCCCCHHHHHHHHHHhCCCCEEEECCCCC
Confidence            578999999999999999999999999999999853               79999999988875   689999999965


Q ss_pred             CC-----------cchhhhhhhHHHHHHHHHHHHcCC--CEEEEEecCCcCCCCccccchHHHHHHHHHHHHH----hCC
Q 023205          133 GS-----------NSYMYKINGTANINAIRAASEKGV--KRFVYISAADFGVANYLLQGYYEGKRAAETELLT----RYP  195 (286)
Q Consensus       133 ~~-----------~~~~~~~~~~~~~~l~~~a~~~~v--~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~~----~~g  195 (286)
                      ..           ....+++|+.++.++++++.....  .+||++||............|+.+|...|.+.+.    ..+
T Consensus        71 ~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~  150 (223)
T 3uce_A           71 APAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGMLSRKVVANTYVKAAINAAIEATTKVLAKELAP  150 (223)
T ss_dssp             CCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchhhccCCCCchHHHHHHHHHHHHHHHHHHhhcC
Confidence            21           124578999999999999876532  3899999964333444567899999999987653    223


Q ss_pred             CcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcCCCCCCCeeEe
Q 023205          196 YGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDPVFPPGIVDV  275 (286)
Q Consensus       196 ~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~l  275 (286)
                      +++++++||.+..+......       ....+.+......  ..|     ...+.+++|+|++++.++..+...|+++++
T Consensus       151 i~vn~v~PG~v~t~~~~~~~-------~~~~~~~~~~~~~--~~~-----~~~~~~~~dvA~~~~~l~~~~~~tG~~i~v  216 (223)
T 3uce_A          151 IRVNAISPGLTKTEAYKGMN-------ADDRDAMYQRTQS--HLP-----VGKVGEASDIAMAYLFAIQNSYMTGTVIDV  216 (223)
T ss_dssp             SEEEEEEECSBCSGGGTTSC-------HHHHHHHHHHHHH--HST-----TCSCBCHHHHHHHHHHHHHCTTCCSCEEEE
T ss_pred             cEEEEEEeCCCcchhhhhcc-------hhhHHHHHHHHhh--cCC-----CCCccCHHHHHHHHHHHccCCCCCCcEEEe
Confidence            99999999999876432110       0111111111110  112     134678999999999999877778999999


Q ss_pred             ccccccc
Q 023205          276 HGILRYS  282 (286)
Q Consensus       276 ~~~~~~s  282 (286)
                      .|+..++
T Consensus       217 dgG~~~s  223 (223)
T 3uce_A          217 DGGALLG  223 (223)
T ss_dssp             STTGGGC
T ss_pred             cCCeecC
Confidence            9987653

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=99.89  E-value=7.2e-22  Score=165.42  Aligned_cols=188  Identities=15%  Similarity=0.046  Sum_probs=138.0

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc-----cccCCceeEEeccCCCHhHHHHHhc-------C
Q 023205           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------G  121 (286)
Q Consensus        54 ~~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~-----~~~~~~~~~i~~Dl~d~~~~~~~~~-------~  121 (286)
                      ...++||||||+|+||++++++|+++|++|++++|+.++...     .....++.++.+|++|.+++.++++       .
T Consensus        27 l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~  106 (262)
T 3rkr_A           27 LSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAHGR  106 (262)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhcCC
Confidence            346799999999999999999999999999999998654211     1123578999999999998887775       4


Q ss_pred             CCEEEEccccCC-----------CcchhhhhhhHHHHHHHHHHH----HcCCCEEEEEecCCcCCCCccccchHHHHHHH
Q 023205          122 VTAVISCVGGFG-----------SNSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEGKRAA  186 (286)
Q Consensus       122 ~d~vi~~a~~~~-----------~~~~~~~~~~~~~~~l~~~a~----~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~  186 (286)
                      +|+||||||...           .....+++|+.++.++++++.    +.+..+||++||............|+.+|...
T Consensus       107 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~  186 (262)
T 3rkr_A          107 CDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKNPVADGAAYTASKWGL  186 (262)
T ss_dssp             CSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECSSCSSCCCTTCHHHHHHHHHH
T ss_pred             CCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCCCCchHHHHHHHH
Confidence            899999999731           113467899999998888764    35667999999964334445567899999999


Q ss_pred             HHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHH
Q 023205          187 ETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAV  260 (286)
Q Consensus       187 E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~  260 (286)
                      +.+.+.      ..|+++++++||.+..+.....               .      ..     .....+++.+|+|++++
T Consensus       187 ~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~---------------~------~~-----~~~~~~~~p~dvA~~v~  240 (262)
T 3rkr_A          187 NGLMTSAAEELRQHQVRVSLVAPGSVRTEFGVGL---------------S------AK-----KSALGAIEPDDIADVVA  240 (262)
T ss_dssp             HHHHHHHHHHHGGGTCEEEEEEECCC------------------------------------------CCCHHHHHHHHH
T ss_pred             HHHHHHHHHHhhhcCcEEEEEecCCCcCCccccc---------------c------cc-----cccccCCCHHHHHHHHH
Confidence            987653      4689999999999975532110               0      00     01234679999999999


Q ss_pred             HHhcCCC
Q 023205          261 RAATDPV  267 (286)
Q Consensus       261 ~~l~~~~  267 (286)
                      .++..+.
T Consensus       241 ~l~s~~~  247 (262)
T 3rkr_A          241 LLATQAD  247 (262)
T ss_dssp             HHHTCCT
T ss_pred             HHhcCcc
Confidence            9997654

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=99.89  E-value=1.5e-21  Score=166.00  Aligned_cols=213  Identities=12%  Similarity=0.020  Sum_probs=152.6

Q ss_pred             CCCeEEEEcCCCh--hHHHHHHHHHHCCCeEEEEecCCCccc--cc--ccCCceeEEeccCCCHhHHHHHhc-------C
Q 023205           55 PSEKLLVLGGNGF--VGSHICREALDRGLTVASLSRSGRSSL--RD--SWANNVIWHQGNLLSSDSWKEALD-------G  121 (286)
Q Consensus        55 ~~~~VlVtGatG~--iG~~l~~~Ll~~g~~V~~l~R~~~~~~--~~--~~~~~~~~i~~Dl~d~~~~~~~~~-------~  121 (286)
                      ..++++||||+|+  ||+++++.|+++|++|+++.|+.....  .+  ....++.++.+|++|.++++++++       .
T Consensus        30 ~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  109 (293)
T 3grk_A           30 QGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLEKKWGK  109 (293)
T ss_dssp             TTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHHTSC
T ss_pred             CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            4678999999988  999999999999999999999843210  00  112368899999999999888775       6


Q ss_pred             CCEEEEccccCCC--------------cchhhhhhhHHHHHHHHHHHHcCC--CEEEEEecCCcCCCCccccchHHHHHH
Q 023205          122 VTAVISCVGGFGS--------------NSYMYKINGTANINAIRAASEKGV--KRFVYISAADFGVANYLLQGYYEGKRA  185 (286)
Q Consensus       122 ~d~vi~~a~~~~~--------------~~~~~~~~~~~~~~l~~~a~~~~v--~~~v~~Ss~~~~~~~~~~~~y~~sK~~  185 (286)
                      +|++|||||....              ....+++|+.++.++++++.....  .+||++||............|+.+|..
T Consensus       110 iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa  189 (293)
T 3grk_A          110 LDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGAEKVMPNYNVMGVAKAA  189 (293)
T ss_dssp             CSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGGGTSBCTTTTHHHHHHHH
T ss_pred             CCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehhhccCCCchHHHHHHHHH
Confidence            8999999996531              124678999999999999876433  489999995433333456789999999


Q ss_pred             HHHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHH
Q 023205          186 AETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVA  259 (286)
Q Consensus       186 ~E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~  259 (286)
                      .+.+.+.      ..|+++++++||.+..+.....        ............   ..|.     ..+.+++|+|+++
T Consensus       190 ~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~--------~~~~~~~~~~~~---~~p~-----~r~~~pedvA~~v  253 (293)
T 3grk_A          190 LEASVKYLAVDLGPQNIRVNAISAGPIKTLAASGI--------GDFRYILKWNEY---NAPL-----RRTVTIDEVGDVG  253 (293)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECCCCC--------------CCHHHHHHHHHH---HSTT-----SSCCCHHHHHHHH
T ss_pred             HHHHHHHHHHHHhHhCCEEEEEecCCCcchhhhcc--------cchHHHHHHHHh---cCCC-----CCCCCHHHHHHHH
Confidence            9987653      4689999999999987643211        111111111111   1111     2467899999999


Q ss_pred             HHHhcCC--CCCCCeeEecccccccc
Q 023205          260 VRAATDP--VFPPGIVDVHGILRYSQ  283 (286)
Q Consensus       260 ~~~l~~~--~~~~~~~~l~~~~~~s~  283 (286)
                      +.++...  ...|+++++.|+..+..
T Consensus       254 ~~L~s~~~~~itG~~i~vdGG~~~~~  279 (293)
T 3grk_A          254 LYFLSDLSRSVTGEVHHADSGYHVIG  279 (293)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTGGGBC
T ss_pred             HHHcCccccCCcceEEEECCCcccCC
Confidence            9999753  35689999999877654

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=99.89  E-value=7.4e-22  Score=164.37  Aligned_cols=210  Identities=10%  Similarity=0.039  Sum_probs=138.1

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc-----cccCCceeEEeccCCCHhHHHHHhc------CCC
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD------GVT  123 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~-----~~~~~~~~~i~~Dl~d~~~~~~~~~------~~d  123 (286)
                      .+++++||||+|+||++++++|+++|++|++++|+.++...     .....++.++.+|++|+++++++++      ++|
T Consensus         6 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~g~id   85 (252)
T 3h7a_A            6 RNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAHAPLE   85 (252)
T ss_dssp             CSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHSCEE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhhCCce
Confidence            35789999999999999999999999999999998765321     1114578999999999999988886      679


Q ss_pred             EEEEccccCCC----------cchhhhhhhHHHHHHHHHH----HHcCCCEEEEEecCCcCCCCccccchHHHHHHHHHH
Q 023205          124 AVISCVGGFGS----------NSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETE  189 (286)
Q Consensus       124 ~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a----~~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~  189 (286)
                      ++|||||....          ....+++|+.++.++++++    ++.+..+||++||............|+.+|...+.+
T Consensus        86 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l  165 (252)
T 3h7a_A           86 VTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATASLRGGSGFAAFASAKFGLRAV  165 (252)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTCCCTTCHHHHHHHHHHHHH
T ss_pred             EEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHHcCCCCCCccHHHHHHHHHHH
Confidence            99999996532          1356789999999888876    345556999999954333344567899999999987


Q ss_pred             HHH------hCCCcE-EEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHH
Q 023205          190 LLT------RYPYGG-VILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRA  262 (286)
Q Consensus       190 ~~~------~~g~~~-~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~  262 (286)
                      .+.      ..|+++ +++.||.+..+......       ..    .....  ....      ...+.+++|+|++++.+
T Consensus       166 ~~~la~e~~~~gi~v~n~v~PG~v~T~~~~~~~-------~~----~~~~~--~~~~------~~~~~~pedvA~~~~~l  226 (252)
T 3h7a_A          166 AQSMARELMPKNIHVAHLIIDSGVDTAWVRERR-------EQ----MFGKD--ALAN------PDLLMPPAAVAGAYWQL  226 (252)
T ss_dssp             HHHHHHHHGGGTEEEEEEEEC----------------------------------------------CCHHHHHHHHHHH
T ss_pred             HHHHHHHhhhcCCEEEEEecCCccCChhhhccc-------hh----hhhhh--hhcC------CccCCCHHHHHHHHHHH
Confidence            653      468999 89999999765432110       00    00000  0001      11278999999999999


Q ss_pred             hcCCCC-CCCeeEecccccccc
Q 023205          263 ATDPVF-PPGIVDVHGILRYSQ  283 (286)
Q Consensus       263 l~~~~~-~~~~~~l~~~~~~s~  283 (286)
                      +..+.. .-..+.+..+....|
T Consensus       227 ~s~~~~~~~~~i~~~~~~~~~~  248 (252)
T 3h7a_A          227 YQQPKSAWTFEMEIRPYGEGHH  248 (252)
T ss_dssp             HHCCGGGBCSEEEEBCC-----
T ss_pred             HhCchhcceeeEEeeecCCCCC
Confidence            986542 123334444444444

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=99.89  E-value=9.5e-22  Score=164.38  Aligned_cols=212  Identities=15%  Similarity=0.090  Sum_probs=147.8

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc------cccCCceeEEeccCCCHhHHHHHhc-------C
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD-------G  121 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~------~~~~~~~~~i~~Dl~d~~~~~~~~~-------~  121 (286)
                      ..++++||||+|+||++++++|+++|++|+++.++..+...      .....++.++.+|++|+++++++++       +
T Consensus         7 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   86 (259)
T 3edm_A            7 TNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADKFGE   86 (259)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHHCS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            46799999999999999999999999999998665433211      1124578999999999999888775       6


Q ss_pred             CCEEEEccccCCC-----------cchhhhhhhHHHHHHHHHHHHcCCC--EEEEEecCCcC-CCCccccchHHHHHHHH
Q 023205          122 VTAVISCVGGFGS-----------NSYMYKINGTANINAIRAASEKGVK--RFVYISAADFG-VANYLLQGYYEGKRAAE  187 (286)
Q Consensus       122 ~d~vi~~a~~~~~-----------~~~~~~~~~~~~~~l~~~a~~~~v~--~~v~~Ss~~~~-~~~~~~~~y~~sK~~~E  187 (286)
                      +|++|||||....           ....+++|+.++.++++++.....+  +||++||.... ........|+.+|...+
T Consensus        87 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~  166 (259)
T 3edm_A           87 IHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSSQAGRDGGGPGALAYATSKGAVM  166 (259)
T ss_dssp             EEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHCCSTTCHHHHHHHHHHH
T ss_pred             CCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcCHHhccCCCCCcHHHHHHHHHHH
Confidence            8999999985411           1356789999999999999775433  89999995322 23345678999999999


Q ss_pred             HHHHH-----hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHH
Q 023205          188 TELLT-----RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRA  262 (286)
Q Consensus       188 ~~~~~-----~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~  262 (286)
                      .+.+.     ...++++++.||.+..+...... .         +......  ....|     ...+.+++|+|++++.+
T Consensus       167 ~l~~~la~e~~~~I~vn~v~PG~v~T~~~~~~~-~---------~~~~~~~--~~~~p-----~~r~~~pedva~~v~~L  229 (259)
T 3edm_A          167 TFTRGLAKEVGPKIRVNAVCPGMISTTFHDTFT-K---------PEVRERV--AGATS-----LKREGSSEDVAGLVAFL  229 (259)
T ss_dssp             HHHHHHHHHHTTTCEEEEEEECCBCC---------------------------------------CCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHCCCCEEEEEEECCCcCccccccc-C---------hHHHHHH--HhcCC-----CCCCcCHHHHHHHHHHH
Confidence            87753     23499999999999765432110 0         0000000  01111     23567899999999999


Q ss_pred             hcCCC--CCCCeeEecccccccc
Q 023205          263 ATDPV--FPPGIVDVHGILRYSQ  283 (286)
Q Consensus       263 l~~~~--~~~~~~~l~~~~~~s~  283 (286)
                      +....  ..|+.+++.|+.....
T Consensus       230 ~s~~~~~itG~~i~vdGg~~~~~  252 (259)
T 3edm_A          230 ASDDAAYVTGACYDINGGVLFSE  252 (259)
T ss_dssp             HSGGGTTCCSCEEEESBCSSBC-
T ss_pred             cCccccCccCCEEEECCCcCCCC
Confidence            97543  4689999998765543

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=99.88  E-value=4.7e-22  Score=167.45  Aligned_cols=185  Identities=14%  Similarity=0.065  Sum_probs=139.7

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc-----cccCCceeEEeccCCCHhHHHHHhc-------CC
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------GV  122 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~-----~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~  122 (286)
                      ..++|+||||+|+||++++++|+++|++|++++|+.++...     .....++.++.+|++|+++++++++       ++
T Consensus        30 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i  109 (272)
T 1yb1_A           30 TGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGDV  109 (272)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCCC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHHCCCC
Confidence            46799999999999999999999999999999998643211     1113478999999999998887775       68


Q ss_pred             CEEEEccccCCCc----------chhhhhhhHHHHHHHHHHH----HcCCCEEEEEecCCcCCCCccccchHHHHHHHHH
Q 023205          123 TAVISCVGGFGSN----------SYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEGKRAAET  188 (286)
Q Consensus       123 d~vi~~a~~~~~~----------~~~~~~~~~~~~~l~~~a~----~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~  188 (286)
                      |+||||||.....          ...+++|+.++.++++++.    +.+.++||++||........+...|+.+|...|.
T Consensus       110 D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~  189 (272)
T 1yb1_A          110 SILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSKFAAVG  189 (272)
T ss_dssp             SEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHHHHHHHHHHHHHHHH
T ss_pred             cEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCCCchhHHHHHHHHHH
Confidence            9999999865321          2467899999887777663    4567799999995322233445679999999998


Q ss_pred             HHHH---------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHH
Q 023205          189 ELLT---------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVA  259 (286)
Q Consensus       189 ~~~~---------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~  259 (286)
                      +++.         ..|++++++|||.+.++....          ..                  .....+++++|+|+++
T Consensus       190 l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~~~----------~~------------------~~~~~~~~~~dva~~i  241 (272)
T 1yb1_A          190 FHKTLTDELAALQITGVKTTCLCPNFVNTGFIKN----------PS------------------TSLGPTLEPEEVVNRL  241 (272)
T ss_dssp             HHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTC----------TH------------------HHHCCCCCHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCCeEEEEEeCCcccCCcccc----------cc------------------ccccCCCCHHHHHHHH
Confidence            7652         248999999999998764210          00                  0113468999999999


Q ss_pred             HHHhcCCC
Q 023205          260 VRAATDPV  267 (286)
Q Consensus       260 ~~~l~~~~  267 (286)
                      +.++..+.
T Consensus       242 ~~~~~~~~  249 (272)
T 1yb1_A          242 MHGILTEQ  249 (272)
T ss_dssp             HHHHHTTC
T ss_pred             HHHHHcCC
Confidence            99998764

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=99.88  E-value=4.3e-22  Score=163.54  Aligned_cols=186  Identities=15%  Similarity=0.083  Sum_probs=136.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc--cccCCceeEEeccCCCHhHHHHHhcCC----CEEEEcc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSWANNVIWHQGNLLSSDSWKEALDGV----TAVISCV  129 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~--~~~~~~~~~i~~Dl~d~~~~~~~~~~~----d~vi~~a  129 (286)
                      ||+||||||+|+||++++++|+++|++|++++|+.++...  .....++.++.+|++|.++++++++.+    |+|||||
T Consensus         1 Mk~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~d~lv~~A   80 (230)
T 3guy_A            1 MSLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNNVGYRARDLASHQEVEQLFEQLDSIPSTVVHSA   80 (230)
T ss_dssp             --CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTCSSCCCEEECCTTCHHHHHHHHHSCSSCCSEEEECC
T ss_pred             CCEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhccCeEeecCCCHHHHHHHHHHHhhcCCEEEEeC
Confidence            4689999999999999999999999999999998654211  222457899999999999999998765    8999999


Q ss_pred             ccCCC----------cchhhhhhhHHHHHHHHHHHHcCC---CEEEEEecCCcCCCCccccchHHHHHHHHHHHHH----
Q 023205          130 GGFGS----------NSYMYKINGTANINAIRAASEKGV---KRFVYISAADFGVANYLLQGYYEGKRAAETELLT----  192 (286)
Q Consensus       130 ~~~~~----------~~~~~~~~~~~~~~l~~~a~~~~v---~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~~----  192 (286)
                      |....          ....+++|+.++.++++++.....   .+||++||............|+.+|...+.+.+.    
T Consensus        81 g~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e  160 (230)
T 3guy_A           81 GSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPVNVVMIMSTAAQQPKAQESTYCAVKWAVKGLIESVRLE  160 (230)
T ss_dssp             CCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeecccCCCCCCCchhHHHHHHHHHHHHHHHHH
Confidence            86531          134678999999999988865422   2899999964334445567899999999987653    


Q ss_pred             --hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcCCC
Q 023205          193 --RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDPV  267 (286)
Q Consensus       193 --~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~~  267 (286)
                        ..|++++.++||.+..+.....               .      ...+     ...+++++|+|++++.++..+.
T Consensus       161 ~~~~gi~v~~v~PG~v~t~~~~~~---------------~------~~~~-----~~~~~~~~dvA~~i~~l~~~~~  211 (230)
T 3guy_A          161 LKGKPMKIIAVYPGGMATEFWETS---------------G------KSLD-----TSSFMSAEDAALMIHGALANIG  211 (230)
T ss_dssp             TTTSSCEEEEEEECCC------------------------------------------CCCHHHHHHHHHHHCCEET
T ss_pred             HHhcCeEEEEEECCcccChHHHhc---------------C------CCCC-----cccCCCHHHHHHHHHHHHhCcC
Confidence              3589999999999975532110               0      0011     2357899999999999987554

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=99.88  E-value=2.1e-22  Score=170.13  Aligned_cols=195  Identities=16%  Similarity=0.169  Sum_probs=138.4

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc---c----ccCCceeEEeccCCCHhHHHHHhc-------
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR---D----SWANNVIWHQGNLLSSDSWKEALD-------  120 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~---~----~~~~~~~~i~~Dl~d~~~~~~~~~-------  120 (286)
                      ..++||||||+|+||++++++|+++|++|++++|+.++...   +    ....++.++.+|++|+++++++++       
T Consensus        31 ~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  110 (279)
T 1xg5_A           31 RDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHS  110 (279)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhCC
Confidence            35789999999999999999999999999999998643211   0    012468899999999999887775       


Q ss_pred             CCCEEEEccccCCC----------cchhhhhhhHH----HHHHHHHHHHcCC--CEEEEEecCC-cC-CCCccccchHHH
Q 023205          121 GVTAVISCVGGFGS----------NSYMYKINGTA----NINAIRAASEKGV--KRFVYISAAD-FG-VANYLLQGYYEG  182 (286)
Q Consensus       121 ~~d~vi~~a~~~~~----------~~~~~~~~~~~----~~~l~~~a~~~~v--~~~v~~Ss~~-~~-~~~~~~~~y~~s  182 (286)
                      ++|+||||||....          ....+++|+.+    +.++++.+++.+.  .+||++||.. +. ....+...|+.+
T Consensus       111 ~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~Y~~s  190 (279)
T 1xg5_A          111 GVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSAT  190 (279)
T ss_dssp             CCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSCGGGHHHHHH
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhhcccCCCCCCchhHHH
Confidence            79999999986431          13456889999    5566677777775  7999999953 22 233455789999


Q ss_pred             HHHHHHHHHH--------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHH
Q 023205          183 KRAAETELLT--------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTV  254 (286)
Q Consensus       183 K~~~E~~~~~--------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D  254 (286)
                      |...|.+.+.        ..++++++++||.+.++......       ......+....           ....+++++|
T Consensus       191 K~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~-------~~~~~~~~~~~-----------~~~~~~~~~d  252 (279)
T 1xg5_A          191 KYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLH-------DKDPEKAAATY-----------EQMKCLKPED  252 (279)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHT-------TTCHHHHHHHH-----------C---CBCHHH
T ss_pred             HHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchhhhhhc-------ccChhHHhhhc-----------ccccCCCHHH
Confidence            9998876642        46899999999999765311000       00001111100           1124689999


Q ss_pred             HHHHHHHHhcCCC
Q 023205          255 VAKVAVRAATDPV  267 (286)
Q Consensus       255 va~~~~~~l~~~~  267 (286)
                      +|++++.++..+.
T Consensus       253 vA~~i~~l~~~~~  265 (279)
T 1xg5_A          253 VAEAVIYVLSTPA  265 (279)
T ss_dssp             HHHHHHHHHHSCT
T ss_pred             HHHHHHHHhcCCc
Confidence            9999999998654

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=99.88  E-value=1.4e-21  Score=163.99  Aligned_cols=195  Identities=15%  Similarity=0.123  Sum_probs=145.6

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCC---CeEEEEecCCCcccc--c--ccCCceeEEeccCCCHhHHHHHhc-------
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRG---LTVASLSRSGRSSLR--D--SWANNVIWHQGNLLSSDSWKEALD-------  120 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g---~~V~~l~R~~~~~~~--~--~~~~~~~~i~~Dl~d~~~~~~~~~-------  120 (286)
                      .+++|+||||+|+||++++++|+++|   ++|++++|+.++...  +  ....++.++.+|++|.++++++++       
T Consensus        20 ~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   99 (267)
T 1sny_A           20 HMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTK   99 (267)
T ss_dssp             CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHG
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHHHHhhccCCceEEEEecCCChHHHHHHHHHHHHhcC
Confidence            46799999999999999999999999   999999998765221  1  113478999999999999888876       


Q ss_pred             --CCCEEEEccccCC-C----------cchhhhhhhHHHHHHHHHHHHc----------C-----CCEEEEEecCC-cCC
Q 023205          121 --GVTAVISCVGGFG-S----------NSYMYKINGTANINAIRAASEK----------G-----VKRFVYISAAD-FGV  171 (286)
Q Consensus       121 --~~d~vi~~a~~~~-~----------~~~~~~~~~~~~~~l~~~a~~~----------~-----v~~~v~~Ss~~-~~~  171 (286)
                        ++|+||||||... .          ....+++|+.++.++++++...          +     ..+||++||.. +..
T Consensus       100 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~  179 (267)
T 1sny_A          100 DQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQ  179 (267)
T ss_dssp             GGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCST
T ss_pred             CCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEEeccccccc
Confidence              7999999999654 1          1245689999999998887543          2     46899999952 222


Q ss_pred             C--CccccchHHHHHHHHHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCC
Q 023205          172 A--NYLLQGYYEGKRAAETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVG  243 (286)
Q Consensus       172 ~--~~~~~~y~~sK~~~E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  243 (286)
                      .  ..+...|+.+|...|.+.+.      ..|++++++|||.+..+...                               
T Consensus       180 ~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~-------------------------------  228 (267)
T 1sny_A          180 GNTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGG-------------------------------  228 (267)
T ss_dssp             TCCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTC-------------------------------
T ss_pred             CCCCCCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecCCCC-------------------------------
Confidence            1  12556799999999987753      36899999999998654321                               


Q ss_pred             CccCCCccHHHHHHHHHHHhcCCC--CCCCeeEecccccccc
Q 023205          244 PLFTPPVNVTVVAKVAVRAATDPV--FPPGIVDVHGILRYSQ  283 (286)
Q Consensus       244 ~~~~~~i~v~Dva~~~~~~l~~~~--~~~~~~~l~~~~~~s~  283 (286)
                        ...+++.+|+|+.++.++....  ..+..+.+.|. .+.|
T Consensus       229 --~~~~~~~~~~a~~~~~~~~~~~~~~~G~~~~~~g~-~~~w  267 (267)
T 1sny_A          229 --SSAPLDVPTSTGQIVQTISKLGEKQNGGFVNYDGT-PLAW  267 (267)
T ss_dssp             --TTCSBCHHHHHHHHHHHHHHCCGGGTTCEECTTSC-BCCC
T ss_pred             --CCCCCCHHHHHHHHHHHHHhcCcCCCCcEEccCCc-CcCC
Confidence              0135788999999999997543  34566655543 3444

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=99.88  E-value=1.6e-21  Score=163.89  Aligned_cols=216  Identities=12%  Similarity=0.022  Sum_probs=153.5

Q ss_pred             CCCCCeEEEEcCC--ChhHHHHHHHHHHCCCeEEEEecCCCcccc--c--ccCCceeEEeccCCCHhHHHHHhc------
Q 023205           53 PPPSEKLLVLGGN--GFVGSHICREALDRGLTVASLSRSGRSSLR--D--SWANNVIWHQGNLLSSDSWKEALD------  120 (286)
Q Consensus        53 ~~~~~~VlVtGat--G~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~--~--~~~~~~~~i~~Dl~d~~~~~~~~~------  120 (286)
                      ....++|+||||+  |+||++++++|+++|++|++++|+......  +  ....++.++.+|++|+++++++++      
T Consensus        11 ~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   90 (271)
T 3ek2_A           11 FLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQIDALFASLKTHW   90 (271)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHC
T ss_pred             ccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHHHHHc
Confidence            3457899999999  999999999999999999999998432111  0  112458899999999999888875      


Q ss_pred             -CCCEEEEccccCCC---------------cchhhhhhhHHHHHHHHHHHHcC--CCEEEEEecCCcCCCCccccchHHH
Q 023205          121 -GVTAVISCVGGFGS---------------NSYMYKINGTANINAIRAASEKG--VKRFVYISAADFGVANYLLQGYYEG  182 (286)
Q Consensus       121 -~~d~vi~~a~~~~~---------------~~~~~~~~~~~~~~l~~~a~~~~--v~~~v~~Ss~~~~~~~~~~~~y~~s  182 (286)
                       .+|++|||||....               ....+++|+.++.++++++...-  ..+||++||............|+.+
T Consensus        91 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as  170 (271)
T 3ek2_A           91 DSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERAIPNYNTMGLA  170 (271)
T ss_dssp             SCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTTTTHHHHH
T ss_pred             CCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEeccccccCCCCccchhHH
Confidence             57999999986431               12456899999999999987642  2489999995433334456789999


Q ss_pred             HHHHHHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHH
Q 023205          183 KRAAETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVA  256 (286)
Q Consensus       183 K~~~E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva  256 (286)
                      |...+.+.+.      ..|+++++++||.+..+......        . .+........  ..|     ...+.+++|+|
T Consensus       171 Kaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~--------~-~~~~~~~~~~--~~~-----~~~~~~pedva  234 (271)
T 3ek2_A          171 KAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASGIK--------S-FGKILDFVES--NSP-----LKRNVTIEQVG  234 (271)
T ss_dssp             HHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----CCCH--------H-HHHHHHHHHH--HST-----TSSCCCHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhhccc--------c-hHHHHHHHHh--cCC-----cCCCCCHHHHH
Confidence            9999987653      46899999999999876432210        0 0111111110  111     12467899999


Q ss_pred             HHHHHHhcC--CCCCCCeeEeccccccccc
Q 023205          257 KVAVRAATD--PVFPPGIVDVHGILRYSQK  284 (286)
Q Consensus       257 ~~~~~~l~~--~~~~~~~~~l~~~~~~s~~  284 (286)
                      ++++.++..  ....|+++++.|+..++-.
T Consensus       235 ~~i~~l~s~~~~~~tG~~i~vdgG~~~~~~  264 (271)
T 3ek2_A          235 NAGAFLLSDLASGVTAEVMHVDSGFNAVVG  264 (271)
T ss_dssp             HHHHHHHSGGGTTCCSEEEEESTTGGGBCC
T ss_pred             HHHHHHcCcccCCeeeeEEEECCCeeeehh
Confidence            999999975  3356899999998877654

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=99.88  E-value=1.5e-21  Score=163.95  Aligned_cols=222  Identities=13%  Similarity=0.084  Sum_probs=153.0

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc------c-ccCCceeEEeccCCCHhHHHHHhc---CCCE
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------D-SWANNVIWHQGNLLSSDSWKEALD---GVTA  124 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~------~-~~~~~~~~i~~Dl~d~~~~~~~~~---~~d~  124 (286)
                      ..++++||||+|+||++++++|+++|++|++++|+.++...      . .....+.++.+|++|++.++++++   ++|+
T Consensus         9 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id~   88 (267)
T 3t4x_A            9 KGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKYPKVDI   88 (267)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHCCCCSE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhcCCCCE
Confidence            35789999999999999999999999999999998654211      1 113467889999999998888776   6899


Q ss_pred             EEEccccCCC----------cchhhhhhhHHHHHHHHHHH----HcCCCEEEEEecCCcCCCCccccchHHHHHHHHHHH
Q 023205          125 VISCVGGFGS----------NSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEGKRAAETEL  190 (286)
Q Consensus       125 vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~----~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~  190 (286)
                      +|||||....          ....+++|+.++.++.+++.    +.+..+||++||............|+.+|...+.+.
T Consensus        89 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~  168 (267)
T 3t4x_A           89 LINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAIMPSQEMAHYSATKTMQLSLS  168 (267)
T ss_dssp             EEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHH
T ss_pred             EEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhhccCCCcchHHHHHHHHHHHHH
Confidence            9999997532          12457899999887766654    355569999999643334455678999999999877


Q ss_pred             HH------hCCCcEEEEeeCeeecCCCCCccc--cCccccCchHHHHHHhccc-CCCCCCCCCccCCCccHHHHHHHHHH
Q 023205          191 LT------RYPYGGVILRPGFIYGTRTVGGMK--LPLGVIGSPMEMVLQHAKP-LSQLPLVGPLFTPPVNVTVVAKVAVR  261 (286)
Q Consensus       191 ~~------~~g~~~~ilRp~~v~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~i~v~Dva~~~~~  261 (286)
                      +.      ..|+++++++||.+..+.......  .+... ....+........ ....|     ...+.+++|+|++++.
T Consensus       169 ~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-----~~r~~~pedvA~~v~f  242 (267)
T 3t4x_A          169 RSLAELTTGTNVTVNTIMPGSTLTEGVETMLNSLYPNEQ-LTIEEAEKRFMKENRPTSI-----IQRLIRPEEIAHLVTF  242 (267)
T ss_dssp             HHHHHHTTTSEEEEEEEEECCBCCHHHHHHHHHSSTTSC-CCHHHHHHHHHHHHCTTCS-----SCSCBCTHHHHHHHHH
T ss_pred             HHHHHHhCCCCeEEEEEeCCeecCccHHHHHhhcCcccC-CCHHHHHHHHhhccCCccc-----ccCccCHHHHHHHHHH
Confidence            53      357999999999987652110000  00000 0000111111110 01111     2357899999999999


Q ss_pred             HhcCC--CCCCCeeEeccccccc
Q 023205          262 AATDP--VFPPGIVDVHGILRYS  282 (286)
Q Consensus       262 ~l~~~--~~~~~~~~l~~~~~~s  282 (286)
                      ++...  ...|+++++.|+...+
T Consensus       243 L~s~~~~~itG~~i~vdGG~~~s  265 (267)
T 3t4x_A          243 LSSPLSSAINGSALRIDGGLVRS  265 (267)
T ss_dssp             HHSGGGTTCCSCEEEESTTCSCS
T ss_pred             HcCccccCccCCeEEECCCcccc
Confidence            98743  3568999999986544

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=99.88  E-value=6.9e-22  Score=164.56  Aligned_cols=204  Identities=14%  Similarity=0.065  Sum_probs=147.5

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc------cccCCceeEEeccC--CCHhHHHHHhc------
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNL--LSSDSWKEALD------  120 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~------~~~~~~~~~i~~Dl--~d~~~~~~~~~------  120 (286)
                      ..++++||||+|+||++++++|+++|++|++++|+.++...      .....++.++.+|+  +|.++++++++      
T Consensus        11 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   90 (252)
T 3f1l_A           11 NDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAVNY   90 (252)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHHHC
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHHhC
Confidence            46799999999999999999999999999999998654211      11123788999999  88888877765      


Q ss_pred             -CCCEEEEccccCCC-----------cchhhhhhhHHHHHHHHHH----HHcCCCEEEEEecCCcCCCCccccchHHHHH
Q 023205          121 -GVTAVISCVGGFGS-----------NSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKR  184 (286)
Q Consensus       121 -~~d~vi~~a~~~~~-----------~~~~~~~~~~~~~~l~~~a----~~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~  184 (286)
                       .+|++|||||....           ....+++|+.++.++++++    ++.+..+||++||............|+.+|.
T Consensus        91 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~  170 (252)
T 3f1l_A           91 PRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKF  170 (252)
T ss_dssp             SCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             CCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCCEEEEECChhhccCCCCCchhHHHHH
Confidence             68999999996421           1356789999999998887    4456679999999543333445678999999


Q ss_pred             HHHHHHHH-----hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHH
Q 023205          185 AAETELLT-----RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVA  259 (286)
Q Consensus       185 ~~E~~~~~-----~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~  259 (286)
                      ..+.+.+.     ...++++++.||.+..+..                  ......        .....+.+++|+|+++
T Consensus       171 a~~~l~~~la~e~~~~irvn~v~PG~v~t~~~------------------~~~~~~--------~~~~~~~~p~dva~~~  224 (252)
T 3f1l_A          171 ATEGMMQVLADEYQQRLRVNCINPGGTRTAMR------------------ASAFPT--------EDPQKLKTPADIMPLY  224 (252)
T ss_dssp             HHHHHHHHHHHHTTTTCEEEEEECCSBSSHHH------------------HHHCTT--------CCGGGSBCTGGGHHHH
T ss_pred             HHHHHHHHHHHHhcCCcEEEEEecCcccCchh------------------hhhCCc--------cchhccCCHHHHHHHH
Confidence            99987653     2239999999998864311                  110000        1112357889999999


Q ss_pred             HHHhcCCC--CCCCeeEeccccccccc
Q 023205          260 VRAATDPV--FPPGIVDVHGILRYSQK  284 (286)
Q Consensus       260 ~~~l~~~~--~~~~~~~l~~~~~~s~~  284 (286)
                      +.++..+.  ..|+.+++.|+...+..
T Consensus       225 ~~L~s~~~~~itG~~i~vdgG~~~~~~  251 (252)
T 3f1l_A          225 LWLMGDDSRRKTGMTFDAQPGRKPGIS  251 (252)
T ss_dssp             HHHHSGGGTTCCSCEEESSCC------
T ss_pred             HHHcCccccCCCCCEEEeCCCcCCCCC
Confidence            99997643  46899999998876643

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=99.88  E-value=2.8e-21  Score=163.34  Aligned_cols=215  Identities=13%  Similarity=0.026  Sum_probs=155.0

Q ss_pred             CCCCCeEEEEcCCCh--hHHHHHHHHHHCCCeEEEEecCCCccc-cc--ccCCceeEEeccCCCHhHHHHHhc-------
Q 023205           53 PPPSEKLLVLGGNGF--VGSHICREALDRGLTVASLSRSGRSSL-RD--SWANNVIWHQGNLLSSDSWKEALD-------  120 (286)
Q Consensus        53 ~~~~~~VlVtGatG~--iG~~l~~~Ll~~g~~V~~l~R~~~~~~-~~--~~~~~~~~i~~Dl~d~~~~~~~~~-------  120 (286)
                      ....++|+||||+|+  ||++++++|+++|++|++++|+..... .+  ....++.++.+|++|.++++++++       
T Consensus        23 ~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  102 (280)
T 3nrc_A           23 FLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQFKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVELGKVWD  102 (280)
T ss_dssp             TTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHHHHHHCS
T ss_pred             ccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCchHHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHHHHHHcC
Confidence            344679999999966  999999999999999999999872111 11  112468999999999998887775       


Q ss_pred             CCCEEEEccccCCC---------------cchhhhhhhHHHHHHHHHHHHc---CCCEEEEEecCCcCCCCccccchHHH
Q 023205          121 GVTAVISCVGGFGS---------------NSYMYKINGTANINAIRAASEK---GVKRFVYISAADFGVANYLLQGYYEG  182 (286)
Q Consensus       121 ~~d~vi~~a~~~~~---------------~~~~~~~~~~~~~~l~~~a~~~---~v~~~v~~Ss~~~~~~~~~~~~y~~s  182 (286)
                      .+|+||||||....               ....+++|+.++.++++++...   ...+||++||............|+.+
T Consensus       103 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as  182 (280)
T 3nrc_A          103 GLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNRNASMVALTYIGAEKAMPSYNTMGVA  182 (280)
T ss_dssp             SCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECGGGTSCCTTTHHHHHH
T ss_pred             CCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeccccccCCCCchhhHHH
Confidence            47999999997532               1245689999999999988653   34699999995433334456789999


Q ss_pred             HHHHHHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHH
Q 023205          183 KRAAETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVA  256 (286)
Q Consensus       183 K~~~E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva  256 (286)
                      |...+.+.+.      ..|+++++++||.+..+.....        ....+.......   ..|     ...+.+++|+|
T Consensus       183 Kaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~--------~~~~~~~~~~~~---~~p-----~~~~~~pedvA  246 (280)
T 3nrc_A          183 KASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASGI--------SNFKKMLDYNAM---VSP-----LKKNVDIMEVG  246 (280)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGGGGC--------TTHHHHHHHHHH---HST-----TCSCCCHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhhhcC--------cchHHHHHHHHh---cCC-----CCCCCCHHHHH
Confidence            9999987653      4689999999999987643211        111111111111   111     12367899999


Q ss_pred             HHHHHHhcCC--CCCCCeeEecccccccc
Q 023205          257 KVAVRAATDP--VFPPGIVDVHGILRYSQ  283 (286)
Q Consensus       257 ~~~~~~l~~~--~~~~~~~~l~~~~~~s~  283 (286)
                      ++++.++...  ...|+++++.|+..+..
T Consensus       247 ~~v~~l~s~~~~~~tG~~i~vdgG~~~~~  275 (280)
T 3nrc_A          247 NTVAFLCSDMATGITGEVVHVDAGYHCVS  275 (280)
T ss_dssp             HHHHHTTSGGGTTCCSCEEEESTTGGGCC
T ss_pred             HHHHHHhCcccCCcCCcEEEECCCccccC
Confidence            9999998753  35689999999876653

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=99.88  E-value=6.2e-21  Score=161.71  Aligned_cols=220  Identities=12%  Similarity=0.052  Sum_probs=154.0

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcc---------------cc------cccCCceeEEeccCCCHh
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSS---------------LR------DSWANNVIWHQGNLLSSD  113 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~---------------~~------~~~~~~~~~i~~Dl~d~~  113 (286)
                      ..++++||||+|+||++++++|+++|++|++++|+....               ..      .....++.++.+|++|++
T Consensus        10 ~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~   89 (286)
T 3uve_A           10 EGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRDYD   89 (286)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCCHH
Confidence            467999999999999999999999999999999973211               00      112357899999999999


Q ss_pred             HHHHHhc-------CCCEEEEccccCCC-----------cchhhhhhhHHHHHHHHHHHHc----C-CCEEEEEecCCcC
Q 023205          114 SWKEALD-------GVTAVISCVGGFGS-----------NSYMYKINGTANINAIRAASEK----G-VKRFVYISAADFG  170 (286)
Q Consensus       114 ~~~~~~~-------~~d~vi~~a~~~~~-----------~~~~~~~~~~~~~~l~~~a~~~----~-v~~~v~~Ss~~~~  170 (286)
                      +++++++       .+|++|||||....           ....+++|+.++.++++++...    + ..+||++||...-
T Consensus        90 ~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~  169 (286)
T 3uve_A           90 ALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGGL  169 (286)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGT
T ss_pred             HHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEECchhhc
Confidence            9888775       68999999996431           1246789999999998887542    2 3589999995433


Q ss_pred             CCCccccchHHHHHHHHHHHHH------hCCCcEEEEeeCeeecCCCCCcc----ccCccccCchHHHHHHhcccCCCCC
Q 023205          171 VANYLLQGYYEGKRAAETELLT------RYPYGGVILRPGFIYGTRTVGGM----KLPLGVIGSPMEMVLQHAKPLSQLP  240 (286)
Q Consensus       171 ~~~~~~~~y~~sK~~~E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~  240 (286)
                      ........|+.+|...+.+.+.      ..|+++++|+||.+..+......    ..+. ..................+|
T Consensus       170 ~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~p  248 (286)
T 3uve_A          170 KAYPHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPD-LENPGPDDMAPICQMFHTLP  248 (286)
T ss_dssp             SCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTTTSSHHHHHHHCTT-SSSCCHHHHHHHHHTTCSSS
T ss_pred             cCCCCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCcccccchhhhcccc-ccccchhhHHHHHHhhhccC
Confidence            3344567899999999987753      46899999999999876543210    0000 00000000111111111122


Q ss_pred             CCCCccCCCccHHHHHHHHHHHhcCC--CCCCCeeEecccccc
Q 023205          241 LVGPLFTPPVNVTVVAKVAVRAATDP--VFPPGIVDVHGILRY  281 (286)
Q Consensus       241 ~~g~~~~~~i~v~Dva~~~~~~l~~~--~~~~~~~~l~~~~~~  281 (286)
                            ..+.+++|+|++++.++...  ...|+++++.|+..+
T Consensus       249 ------~r~~~p~dvA~~v~fL~s~~a~~itG~~i~vdGG~~l  285 (286)
T 3uve_A          249 ------IPWVEPIDISNAVLFFASDEARYITGVTLPIDAGSCL  285 (286)
T ss_dssp             ------CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             ------CCcCCHHHHHHHHHHHcCccccCCcCCEEeECCcccc
Confidence                  35789999999999999654  356899999998654

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.88  E-value=6.1e-22  Score=163.26  Aligned_cols=194  Identities=17%  Similarity=0.125  Sum_probs=144.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhc---------CCCEEE
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD---------GVTAVI  126 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~---------~~d~vi  126 (286)
                      +++|+||||+|+||++++++|+++|++|++++|+.++..     ....++.+|++|+++++++++         ++|+||
T Consensus         3 ~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~id~lv   77 (236)
T 1ooe_A            3 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA-----DSNILVDGNKNWTEQEQSILEQTASSLQGSQVDGVF   77 (236)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS-----SEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccc-----cccEEEeCCCCCHHHHHHHHHHHHHHhCCCCCCEEE
Confidence            468999999999999999999999999999999876522     246778999999988877765         689999


Q ss_pred             EccccCCC-----------cchhhhhhhHHHHHHHHHHHHcC--CCEEEEEecCCcCCCCccccchHHHHHHHHHHHHH-
Q 023205          127 SCVGGFGS-----------NSYMYKINGTANINAIRAASEKG--VKRFVYISAADFGVANYLLQGYYEGKRAAETELLT-  192 (286)
Q Consensus       127 ~~a~~~~~-----------~~~~~~~~~~~~~~l~~~a~~~~--v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~~-  192 (286)
                      ||||....           ....+++|+.++.++++++...-  ..+||++||............|+.+|...+.+.+. 
T Consensus        78 ~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~l  157 (236)
T 1ooe_A           78 CVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPTPSMIGYGMAKAAVHHLTSSL  157 (236)
T ss_dssp             ECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTBHHHHHHHHHHHHHHHHH
T ss_pred             ECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchhhccCCCCcHHHHHHHHHHHHHHHHH
Confidence            99996421           13456899999999999887642  24899999953323334567899999999987753 


Q ss_pred             -------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcC
Q 023205          193 -------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATD  265 (286)
Q Consensus       193 -------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~  265 (286)
                             ..|+++++++||.+.++...                  .... .       .....+++.+|+|++++.++..
T Consensus       158 a~e~~~~~~gi~v~~v~Pg~v~t~~~~------------------~~~~-~-------~~~~~~~~~~dvA~~i~~~l~s  211 (236)
T 1ooe_A          158 AAKDSGLPDNSAVLTIMPVTLDTPMNR------------------KWMP-N-------ADHSSWTPLSFISEHLLKWTTE  211 (236)
T ss_dssp             HSTTSSCCTTCEEEEEEESCBCCHHHH------------------HHST-T-------CCGGGCBCHHHHHHHHHHHHHC
T ss_pred             HHHhcccCCCeEEEEEecCcccCcchh------------------hcCC-C-------ccccccCCHHHHHHHHHHHHcC
Confidence                   34699999999998764210                  0000 0       1122357889999999977733


Q ss_pred             ---CCCCCCeeEeccccc
Q 023205          266 ---PVFPPGIVDVHGILR  280 (286)
Q Consensus       266 ---~~~~~~~~~l~~~~~  280 (286)
                         ....|+.+++.+...
T Consensus       212 ~~~~~~~G~~~~v~gg~~  229 (236)
T 1ooe_A          212 TSSRPSSGALLKITTENG  229 (236)
T ss_dssp             GGGCCCTTCEEEEEEETT
T ss_pred             CCcccccccEEEEecCCC
Confidence               234588999887643

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=99.88  E-value=3.7e-21  Score=164.14  Aligned_cols=221  Identities=13%  Similarity=0.081  Sum_probs=154.0

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcc-----------cc------cccCCceeEEeccCCCHhHHHH
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSS-----------LR------DSWANNVIWHQGNLLSSDSWKE  117 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~-----------~~------~~~~~~~~~i~~Dl~d~~~~~~  117 (286)
                      ..++++||||+|+||.+++++|+++|++|++++|+....           ..      .....++.++.+|++|++++++
T Consensus        27 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~  106 (299)
T 3t7c_A           27 EGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAMQA  106 (299)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHH
Confidence            457899999999999999999999999999999974210           00      1123578999999999999888


Q ss_pred             Hhc-------CCCEEEEccccCCC-----------cchhhhhhhHHHHHHHHHHHHc-----CCCEEEEEecCCcCCCCc
Q 023205          118 ALD-------GVTAVISCVGGFGS-----------NSYMYKINGTANINAIRAASEK-----GVKRFVYISAADFGVANY  174 (286)
Q Consensus       118 ~~~-------~~d~vi~~a~~~~~-----------~~~~~~~~~~~~~~l~~~a~~~-----~v~~~v~~Ss~~~~~~~~  174 (286)
                      +++       .+|++|||||....           ....+++|+.++.++++++...     +..+||++||...-....
T Consensus       107 ~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~  186 (299)
T 3t7c_A          107 AVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRGAE  186 (299)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCGGGTSCCT
T ss_pred             HHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCCC
Confidence            775       68999999986431           1356789999999998887542     246899999954333344


Q ss_pred             cccchHHHHHHHHHHHHH------hCCCcEEEEeeCeeecCCCCCcccc---CccccCchHHHHHHhcccCCCCCCCCCc
Q 023205          175 LLQGYYEGKRAAETELLT------RYPYGGVILRPGFIYGTRTVGGMKL---PLGVIGSPMEMVLQHAKPLSQLPLVGPL  245 (286)
Q Consensus       175 ~~~~y~~sK~~~E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~~  245 (286)
                      ....|+.+|...+.+.+.      ..|+++++|+||.+..+........   .....................+|     
T Consensus       187 ~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-----  261 (299)
T 3t7c_A          187 NIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVEDFQVASRQMHVLP-----  261 (299)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHHHHHSSSS-----
T ss_pred             CcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCccccccchhhhhhhhhccchhhHHHHHhhhhcccC-----
Confidence            567899999999987653      4589999999999987754321000   00000000011100000111111     


Q ss_pred             cCCCccHHHHHHHHHHHhcCCC--CCCCeeEecccccc
Q 023205          246 FTPPVNVTVVAKVAVRAATDPV--FPPGIVDVHGILRY  281 (286)
Q Consensus       246 ~~~~i~v~Dva~~~~~~l~~~~--~~~~~~~l~~~~~~  281 (286)
                       ..+..++|+|++++.++....  ..|+++++.|+..+
T Consensus       262 -~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG~~l  298 (299)
T 3t7c_A          262 -IPYVEPADISNAILFLVSDDARYITGVSLPVDGGALL  298 (299)
T ss_dssp             -CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             -cCCCCHHHHHHHHHHHhCcccccCcCCEEeeCCCccc
Confidence             346899999999999997543  56899999998654

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=99.88  E-value=3e-21  Score=162.74  Aligned_cols=210  Identities=12%  Similarity=0.002  Sum_probs=150.7

Q ss_pred             CCeEEEEcCC--ChhHHHHHHHHHHCCCeEEEEecCCCcc--cccc--cCCceeEEeccCCCHhHHHHHhc-------CC
Q 023205           56 SEKLLVLGGN--GFVGSHICREALDRGLTVASLSRSGRSS--LRDS--WANNVIWHQGNLLSSDSWKEALD-------GV  122 (286)
Q Consensus        56 ~~~VlVtGat--G~iG~~l~~~Ll~~g~~V~~l~R~~~~~--~~~~--~~~~~~~i~~Dl~d~~~~~~~~~-------~~  122 (286)
                      +++|+||||+  |+||+++++.|+++|++|++++|+.+..  ..+.  ...++.++.+|++|+++++++++       ++
T Consensus         6 ~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   85 (275)
T 2pd4_A            6 GKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLGSL   85 (275)
T ss_dssp             TCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSCE
T ss_pred             CCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            5789999999  9999999999999999999999987511  1111  11347899999999998887775       57


Q ss_pred             CEEEEccccCCC--------------cchhhhhhhHHHHHHHHHHHHcC--CCEEEEEecCCcCCCCccccchHHHHHHH
Q 023205          123 TAVISCVGGFGS--------------NSYMYKINGTANINAIRAASEKG--VKRFVYISAADFGVANYLLQGYYEGKRAA  186 (286)
Q Consensus       123 d~vi~~a~~~~~--------------~~~~~~~~~~~~~~l~~~a~~~~--v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~  186 (286)
                      |++|||||....              ....+++|+.++.++++++...-  -.+||++||............|+.+|...
T Consensus        86 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~  165 (275)
T 2pd4_A           86 DFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYMAHYNVMGLAKAAL  165 (275)
T ss_dssp             EEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTTCHHHHHHHHHH
T ss_pred             CEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEecchhcCCCCCchhhHHHHHHH
Confidence            999999986532              12467899999999999997652  24899999953323334456799999999


Q ss_pred             HHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHH
Q 023205          187 ETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAV  260 (286)
Q Consensus       187 E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~  260 (286)
                      +.+.+.      ..|+++++++||.+.++.....        ....+.......   ..|.     ..+.+++|+|++++
T Consensus       166 ~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~--------~~~~~~~~~~~~---~~p~-----~~~~~p~dva~~~~  229 (275)
T 2pd4_A          166 ESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGI--------ADFRMILKWNEI---NAPL-----RKNVSLEEVGNAGM  229 (275)
T ss_dssp             HHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGS--------TTHHHHHHHHHH---HSTT-----SSCCCHHHHHHHHH
T ss_pred             HHHHHHHHHHhhhcCeEEEEEeeCccccchhhhc--------cccHHHHHHHHh---cCCc-----CCCCCHHHHHHHHH
Confidence            987653      4689999999999987643211        001111111110   1121     23578999999999


Q ss_pred             HHhcCC--CCCCCeeEecccccc
Q 023205          261 RAATDP--VFPPGIVDVHGILRY  281 (286)
Q Consensus       261 ~~l~~~--~~~~~~~~l~~~~~~  281 (286)
                      .++..+  ...|+.+++.|+...
T Consensus       230 ~l~s~~~~~~tG~~~~vdgg~~~  252 (275)
T 2pd4_A          230 YLLSSLSSGVSGEVHFVDAGYHV  252 (275)
T ss_dssp             HHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHhCccccCCCCCEEEECCCccc
Confidence            999753  346889999887543

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=99.88  E-value=3.3e-22  Score=168.23  Aligned_cols=186  Identities=16%  Similarity=0.028  Sum_probs=141.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHH-CCCeEEEEecCCCcccc-----cccCCceeEEeccCCCHhHHHHHhc-------CC
Q 023205           56 SEKLLVLGGNGFVGSHICREALD-RGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------GV  122 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~-~g~~V~~l~R~~~~~~~-----~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~  122 (286)
                      +++|+||||+|+||++++++|++ .|++|++++|+.++...     .....++.++.+|++|.++++++++       ++
T Consensus         4 ~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i   83 (276)
T 1wma_A            4 IHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGGL   83 (276)
T ss_dssp             CCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSSE
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence            57899999999999999999999 99999999998643211     0113478999999999999888876       78


Q ss_pred             CEEEEccccCCC----------cchhhhhhhHHHHHHHHHHHHcCC--CEEEEEecC-Cc-C--C---------------
Q 023205          123 TAVISCVGGFGS----------NSYMYKINGTANINAIRAASEKGV--KRFVYISAA-DF-G--V---------------  171 (286)
Q Consensus       123 d~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~~~~v--~~~v~~Ss~-~~-~--~---------------  171 (286)
                      |+||||||....          ....+++|+.++.++++++.+...  .+||++||. .+ +  .               
T Consensus        84 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~  163 (276)
T 1wma_A           84 DVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSETIT  163 (276)
T ss_dssp             EEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHHHCSSCC
T ss_pred             CEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECChhhhcccccCChhHHhhccccccc
Confidence            999999986531          124578999999999999977532  489999994 22 1  0               


Q ss_pred             ----------------------CCccccchHHHHHHHHHHHHH------h----CCCcEEEEeeCeeecCCCCCccccCc
Q 023205          172 ----------------------ANYLLQGYYEGKRAAETELLT------R----YPYGGVILRPGFIYGTRTVGGMKLPL  219 (286)
Q Consensus       172 ----------------------~~~~~~~y~~sK~~~E~~~~~------~----~g~~~~ilRp~~v~g~~~~~~~~~~~  219 (286)
                                            ...+...|+.+|...|.+++.      .    .|+++++++||.+.++....      
T Consensus       164 e~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~t~~~~~------  237 (276)
T 1wma_A          164 EEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGP------  237 (276)
T ss_dssp             HHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCT------
T ss_pred             hhhhhhhhhhhhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCccccCcCCc------
Confidence                                  012347899999999987653      2    58999999999997653210      


Q ss_pred             cccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcCCC----CCCCeeE
Q 023205          220 GVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDPV----FPPGIVD  274 (286)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~~----~~~~~~~  274 (286)
                                                 ..+.+++|+|++++.++..+.    ..|+.+.
T Consensus       238 ---------------------------~~~~~~~~~a~~~~~l~~~~~~~~~~~G~~~~  269 (276)
T 1wma_A          238 ---------------------------KATKSPEEGAETPVYLALLPPDAEGPHGQFVS  269 (276)
T ss_dssp             ---------------------------TCSBCHHHHTHHHHHHHSCCTTCCCCCSCEEE
T ss_pred             ---------------------------cccCChhHhhhhHhhhhcCcccccccCceEec
Confidence                                       136899999999999997552    3455555

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=99.88  E-value=1.3e-21  Score=161.86  Aligned_cols=195  Identities=14%  Similarity=0.068  Sum_probs=145.8

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhc---------CCCEE
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD---------GVTAV  125 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~---------~~d~v  125 (286)
                      .+++|+||||+|+||++++++|+++|++|++++|+.++..     ....++.+|++|+++++++++         ++|+|
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~-----~~~~~~~~D~~~~~~v~~~~~~~~~~~~~g~iD~l   80 (241)
T 1dhr_A            6 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA-----SASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDAI   80 (241)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS-----SEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc-----CCcEEEEcCCCCHHHHHHHHHHHHHHhCCCCCCEE
Confidence            3578999999999999999999999999999999876522     245778999999988887765         68999


Q ss_pred             EEccccCCC-----------cchhhhhhhHHHHHHHHHHHHcC--CCEEEEEecCCcCCCCccccchHHHHHHHHHHHHH
Q 023205          126 ISCVGGFGS-----------NSYMYKINGTANINAIRAASEKG--VKRFVYISAADFGVANYLLQGYYEGKRAAETELLT  192 (286)
Q Consensus       126 i~~a~~~~~-----------~~~~~~~~~~~~~~l~~~a~~~~--v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~~  192 (286)
                      |||||....           ....+++|+.++.++++++...-  -.+||++||............|+.+|...+.+.+.
T Consensus        81 v~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~  160 (241)
T 1dhr_A           81 LCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGTPGMIGYGMAKGAVHQLCQS  160 (241)
T ss_dssp             EECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTBHHHHHHHHHHHHHHHH
T ss_pred             EEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECCHHHccCCCCchHHHHHHHHHHHHHHH
Confidence            999996421           12456799999999999887642  24899999953222334567899999999987753


Q ss_pred             --------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhc
Q 023205          193 --------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAAT  264 (286)
Q Consensus       193 --------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~  264 (286)
                              ..|+++++++||.+-.+..                  ..... .       .....+++.+|+|++++.++.
T Consensus       161 la~e~~~~~~gi~v~~v~PG~v~T~~~------------------~~~~~-~-------~~~~~~~~~~~vA~~v~~l~~  214 (241)
T 1dhr_A          161 LAGKNSGMPSGAAAIAVLPVTLDTPMN------------------RKSMP-E-------ADFSSWTPLEFLVETFHDWIT  214 (241)
T ss_dssp             HTSTTSSCCTTCEEEEEEESCEECHHH------------------HHHST-T-------SCGGGSEEHHHHHHHHHHHHT
T ss_pred             HHHHhccCCCCeEEEEEecCcccCccc------------------cccCc-c-------hhhccCCCHHHHHHHHHHHhc
Confidence                    3579999999998864311                  00000 0       112245788999999999997


Q ss_pred             CCC--CCCCeeEeccccc
Q 023205          265 DPV--FPPGIVDVHGILR  280 (286)
Q Consensus       265 ~~~--~~~~~~~l~~~~~  280 (286)
                      ...  ..|+.+++.|...
T Consensus       215 ~~~~~~~G~~~~v~g~~~  232 (241)
T 1dhr_A          215 GNKRPNSGSLIQVVTTDG  232 (241)
T ss_dssp             TTTCCCTTCEEEEEEETT
T ss_pred             CCCcCccceEEEEeCCCC
Confidence            543  4588999887553

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=99.88  E-value=2.9e-21  Score=166.08  Aligned_cols=221  Identities=16%  Similarity=0.120  Sum_probs=152.9

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCccc-----------c------cccCCceeEEeccCCCHhHHH
Q 023205           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSL-----------R------DSWANNVIWHQGNLLSSDSWK  116 (286)
Q Consensus        54 ~~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~-----------~------~~~~~~~~~i~~Dl~d~~~~~  116 (286)
                      ...+++|||||+|+||+++++.|+++|++|++++|+.....           .      .....++.++.+|++|+++++
T Consensus        44 l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~  123 (317)
T 3oec_A           44 LQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASLQ  123 (317)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHH
Confidence            34679999999999999999999999999999988632210           0      112357899999999999988


Q ss_pred             HHhc-------CCCEEEEccccCCC----------cchhhhhhhHHHHHHHHHHHH----cC-CCEEEEEecCCcCCCCc
Q 023205          117 EALD-------GVTAVISCVGGFGS----------NSYMYKINGTANINAIRAASE----KG-VKRFVYISAADFGVANY  174 (286)
Q Consensus       117 ~~~~-------~~d~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~~----~~-v~~~v~~Ss~~~~~~~~  174 (286)
                      ++++       .+|++|||||....          +...+++|+.++.++++++..    .+ -.+||++||...-....
T Consensus       124 ~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~  203 (317)
T 3oec_A          124 AVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRGAP  203 (317)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGGGSSCCT
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHHhcCCCC
Confidence            8775       68999999996532          135678999999998888743    22 35799999954333334


Q ss_pred             cccchHHHHHHHHHHHHH------hCCCcEEEEeeCeeecCCCCCcc----ccCccccCchHHHHHHhcccCCCCCCCCC
Q 023205          175 LLQGYYEGKRAAETELLT------RYPYGGVILRPGFIYGTRTVGGM----KLPLGVIGSPMEMVLQHAKPLSQLPLVGP  244 (286)
Q Consensus       175 ~~~~y~~sK~~~E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  244 (286)
                      ....|+.+|...+.+.+.      ..|+++++|+||.+.++......    ..+. ......+............     
T Consensus       204 ~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-----  277 (317)
T 3oec_A          204 GQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMALNEKLLKMFLPH-LENPTREDAAELFSQLTLL-----  277 (317)
T ss_dssp             TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHCHHHHHHHCTT-CSSCCHHHHHHHHTTTCSS-----
T ss_pred             CCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCccccchhhhhhhhhh-ccccchhHHHHHHhhhccC-----
Confidence            567899999999987753      46899999999999875321100    0000 0000000011111111111     


Q ss_pred             ccCCCccHHHHHHHHHHHhcCC--CCCCCeeEecccccc
Q 023205          245 LFTPPVNVTVVAKVAVRAATDP--VFPPGIVDVHGILRY  281 (286)
Q Consensus       245 ~~~~~i~v~Dva~~~~~~l~~~--~~~~~~~~l~~~~~~  281 (286)
                       ...|++++|+|++++.++...  ...|+++++.|+...
T Consensus       278 -p~~~~~pedvA~av~fL~s~~a~~itG~~i~vdGG~~~  315 (317)
T 3oec_A          278 -PIPWVEPEDVSNAVAWLASDEARYIHGAAIPVDGGQLA  315 (317)
T ss_dssp             -SSSSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGG
T ss_pred             -CCCCCCHHHHHHHHHHHcCCcccCCCCCEEEECcchhh
Confidence             146789999999999998653  346899999998654

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=99.88  E-value=2e-21  Score=161.44  Aligned_cols=203  Identities=16%  Similarity=0.091  Sum_probs=142.7

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc--cccCCceeEEeccCCCHhHHHHHhc-------CCCEEEE
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSWANNVIWHQGNLLSSDSWKEALD-------GVTAVIS  127 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~--~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d~vi~  127 (286)
                      |+++||||+|+||++++++|+++|++|++++|+.++...  .....++.++.+|++|+++++++++       ++|++||
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvn   80 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDILVN   80 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHTSCTTTCCCCEEEE
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEE
Confidence            479999999999999999999999999999998643211  1113478899999999999998875       5899999


Q ss_pred             ccccCC---C--------cchhhhhhhHHHHHHHHHHH----HcCCCEEEEEecCCcCCCCccccchHHHHHHHHHHHHH
Q 023205          128 CVGGFG---S--------NSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLT  192 (286)
Q Consensus       128 ~a~~~~---~--------~~~~~~~~~~~~~~l~~~a~----~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~~  192 (286)
                      |||...   .        ....+++|+.++.++++++.    +.+..+||++||............|+.+|...+.+.+.
T Consensus        81 nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~  160 (248)
T 3asu_A           81 NAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLN  160 (248)
T ss_dssp             CCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHH
T ss_pred             CCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEccchhccCCCCCchHHHHHHHHHHHHHH
Confidence            998642   1        13467899999998888775    45667999999954333334567899999999987653


Q ss_pred             ------hCCCcEEEEeeCeeec-CCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcC
Q 023205          193 ------RYPYGGVILRPGFIYG-TRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATD  265 (286)
Q Consensus       193 ------~~g~~~~ilRp~~v~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~  265 (286)
                            ..|+++++++||.+.| +......  .    .. .+...       ...    ....+++++|+|++++.++..
T Consensus       161 la~e~~~~gi~v~~v~PG~v~gT~~~~~~~--~----~~-~~~~~-------~~~----~~~~~~~p~dvA~~v~~l~s~  222 (248)
T 3asu_A          161 LRTDLHGTAVRVTDIEPGLVGGTEFSNVRF--K----GD-DGKAE-------KTY----QNTVALTPEDVSEAVWWVSTL  222 (248)
T ss_dssp             HHHHTTTSCCEEEEEEECSBCC----------------------------------------CCBCHHHHHHHHHHHHHS
T ss_pred             HHHHhhhcCcEEEEEeccccccCcchhhcc--c----Cc-hHHHH-------HHH----hccCCCCHHHHHHHHHHHhcC
Confidence                  3589999999999984 4221000  0    00 00000       000    011346899999999999976


Q ss_pred             CC-CCCCeeEecc
Q 023205          266 PV-FPPGIVDVHG  277 (286)
Q Consensus       266 ~~-~~~~~~~l~~  277 (286)
                      +. ..+..+.+.+
T Consensus       223 ~~~~~g~~i~v~~  235 (248)
T 3asu_A          223 PAHVNINTLEMMP  235 (248)
T ss_dssp             CTTCCCCEEEECC
T ss_pred             CccceeeEEEEcc
Confidence            54 3456666654

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=99.88  E-value=1.7e-22  Score=173.83  Aligned_cols=207  Identities=17%  Similarity=0.123  Sum_probs=135.8

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc---c--ccC--CceeEEeccCCCHhHHHHHhc-------
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR---D--SWA--NNVIWHQGNLLSSDSWKEALD-------  120 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~---~--~~~--~~~~~i~~Dl~d~~~~~~~~~-------  120 (286)
                      .+++||||||+|+||.+++++|+++|++|++++|+.++...   .  ...  .++.++.+|++|++++.++++       
T Consensus         7 ~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   86 (319)
T 3ioy_A            7 AGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARFG   86 (319)
T ss_dssp             TTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhCC
Confidence            35789999999999999999999999999999998654211   0  011  278999999999998888775       


Q ss_pred             CCCEEEEccccCCC----------cchhhhhhhHHHHHHHHHHHHc----------CCCEEEEEecCCcCCCCccccchH
Q 023205          121 GVTAVISCVGGFGS----------NSYMYKINGTANINAIRAASEK----------GVKRFVYISAADFGVANYLLQGYY  180 (286)
Q Consensus       121 ~~d~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~~~----------~v~~~v~~Ss~~~~~~~~~~~~y~  180 (286)
                      ++|+||||||....          ....+++|+.++.++++++...          +..+||++||...-........|+
T Consensus        87 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~~~~~~~Y~  166 (319)
T 3ioy_A           87 PVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAGSPGIYN  166 (319)
T ss_dssp             CEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCCCSSSHHHH
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccCCCCCHHHH
Confidence            57999999996421          2356789999999998887543          245799999953323334456899


Q ss_pred             HHHHHHHHHHH----H--hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHH
Q 023205          181 EGKRAAETELL----T--RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTV  254 (286)
Q Consensus       181 ~sK~~~E~~~~----~--~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D  254 (286)
                      .+|...+.+..    +  ..|+++++|+||.+.++........+......    +....  ...+..........++++|
T Consensus       167 aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~----~~~~~--~~~~~~~~~~~~~~~~pe~  240 (319)
T 3ioy_A          167 TTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYASDDIRPDALKGE----VKPVD--KTAVERLAGVHEFGMEPDV  240 (319)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC-----------------------------------CCGGGSSBCHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCcccccccCchhhccc----ccchh--HHHHHHHHHhhhcCCCHHH
Confidence            99996665443    2  46899999999999876543221111000000    00000  0001111111112389999


Q ss_pred             HHHHHHHHhcCCC
Q 023205          255 VAKVAVRAATDPV  267 (286)
Q Consensus       255 va~~~~~~l~~~~  267 (286)
                      +|++++.+++.+.
T Consensus       241 vA~~~~~al~~~~  253 (319)
T 3ioy_A          241 IGARVIEAMKANR  253 (319)
T ss_dssp             HHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHcCC
Confidence            9999999998754

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=99.88  E-value=8.8e-22  Score=164.90  Aligned_cols=194  Identities=12%  Similarity=0.048  Sum_probs=136.2

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc-----cccCCceeEEeccCCCHhHHHHHhc-------CC
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------GV  122 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~-----~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~  122 (286)
                      +++++|||||+|+||++++++|+++|++|++++|+.++...     .....++.++.+|++|+++++++++       .+
T Consensus         3 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   82 (264)
T 3tfo_A            3 MDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGRI   82 (264)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            35789999999999999999999999999999998654211     1123578899999999998887765       68


Q ss_pred             CEEEEccccCCC----------cchhhhhhhHHHHHHHHHHH----HcCCCEEEEEecCCcCCCCccccchHHHHHHHHH
Q 023205          123 TAVISCVGGFGS----------NSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEGKRAAET  188 (286)
Q Consensus       123 d~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~----~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~  188 (286)
                      |++|||||....          ....+++|+.++.++++++.    +.+..+||++||...-........|+.+|...+.
T Consensus        83 D~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal~~  162 (264)
T 3tfo_A           83 DVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALSVVPTAAVYCATKFAVRA  162 (264)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHHHHHHH
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHHcccCCCChhHHHHHHHHHH
Confidence            999999997532          13567899999998877764    3456799999996433334456789999999998


Q ss_pred             HHHH----hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhc
Q 023205          189 ELLT----RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAAT  264 (286)
Q Consensus       189 ~~~~----~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~  264 (286)
                      +.+.    ..|+++++|+||.+..+......       .   .....      ...   .....+.+.+|+|++++.++.
T Consensus       163 l~~~la~e~~gIrvn~v~PG~v~T~~~~~~~-------~---~~~~~------~~~---~~~~~~~~pedvA~~v~~l~s  223 (264)
T 3tfo_A          163 ISDGLRQESTNIRVTCVNPGVVESELAGTIT-------H---EETMA------AMD---TYRAIALQPADIARAVRQVIE  223 (264)
T ss_dssp             HHHHHHHHCSSEEEEEEEECCC------------------------------------------CCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHhCCCCEEEEEecCCCcCccccccc-------c---hhHHH------HHH---hhhccCCCHHHHHHHHHHHhc
Confidence            6643    24899999999999765421110       0   00000      000   001124789999999999998


Q ss_pred             CCC
Q 023205          265 DPV  267 (286)
Q Consensus       265 ~~~  267 (286)
                      .+.
T Consensus       224 ~~~  226 (264)
T 3tfo_A          224 APQ  226 (264)
T ss_dssp             SCT
T ss_pred             CCc
Confidence            765

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=99.88  E-value=1e-21  Score=161.81  Aligned_cols=185  Identities=15%  Similarity=0.021  Sum_probs=136.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc--cccCCceeEEeccCCCHhHHHHHhc-------CCCEEE
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSWANNVIWHQGNLLSSDSWKEALD-------GVTAVI  126 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~--~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d~vi  126 (286)
                      +++++||||+|+||++++++|+++|++|++++|+.++...  .....++.++.+|++|+++++++++       .+|++|
T Consensus         3 ~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv   82 (235)
T 3l6e_A            3 LGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGNAVIGIVADLAHHEDVDVAFAAAVEWGGLPELVL   82 (235)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTSHHHHHHHHHHHHHHHCSCSEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcCCCcEEE
Confidence            4789999999999999999999999999999998654211  1112368999999999998887775       579999


Q ss_pred             EccccCCC----------cchhhhhhhHHHHHHHHHHHHcC---CCEEEEEecCCcCCCCccccchHHHHHHHHHHHHH-
Q 023205          127 SCVGGFGS----------NSYMYKINGTANINAIRAASEKG---VKRFVYISAADFGVANYLLQGYYEGKRAAETELLT-  192 (286)
Q Consensus       127 ~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~~~~---v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~~-  192 (286)
                      ||||....          ....+++|+.++.++++++...-   -.+||++||............|+.+|...+.+.+. 
T Consensus        83 nnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~l  162 (235)
T 3l6e_A           83 HCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERGGVLANVLSSAAQVGKANESLYCASKWGMRGFLESL  162 (235)
T ss_dssp             EECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCEECCSSCSSHHHHHHHHHHHHHHHHHH
T ss_pred             ECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHHhcCCCCCCcHHHHHHHHHHHHHHHH
Confidence            99996421          23567899999999888875421   12899999953223334457899999999987653 


Q ss_pred             -----hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcCCC
Q 023205          193 -----RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDPV  267 (286)
Q Consensus       193 -----~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~~  267 (286)
                           ..|+++++++||.+..+.....               .       .     .....+.+++|+|++++.++..+.
T Consensus       163 a~e~~~~gi~v~~v~PG~v~T~~~~~~---------------~-------~-----~~~~~~~~pedvA~~v~~l~~~~~  215 (235)
T 3l6e_A          163 RAELKDSPLRLVNLYPSGIRSEFWDNT---------------D-------H-----VDPSGFMTPEDAAAYMLDALEARS  215 (235)
T ss_dssp             HHHTTTSSEEEEEEEEEEECCCC--------------------------------------CBCHHHHHHHHHHHTCCCS
T ss_pred             HHHhhccCCEEEEEeCCCccCcchhcc---------------C-------C-----CCCcCCCCHHHHHHHHHHHHhCCC
Confidence                 4689999999999965432110               0       0     011246899999999999998654

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=99.88  E-value=2.1e-21  Score=163.02  Aligned_cols=206  Identities=14%  Similarity=0.123  Sum_probs=147.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc------cccCCceeEEeccCCCHhHHHHHhc-------CC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD-------GV  122 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~------~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~  122 (286)
                      .++++||||+|+||++++++|+++|++|++..++......      .....++.++.+|++|+++++++++       ++
T Consensus        27 ~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i  106 (267)
T 3u5t_A           27 NKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAFGGV  106 (267)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            5789999999999999999999999999998665543221      1123578899999999998888775       68


Q ss_pred             CEEEEccccCCC----------cchhhhhhhHHHHHHHHHHHHcC--CCEEEEEecCCcCCCCccccchHHHHHHHHHHH
Q 023205          123 TAVISCVGGFGS----------NSYMYKINGTANINAIRAASEKG--VKRFVYISAADFGVANYLLQGYYEGKRAAETEL  190 (286)
Q Consensus       123 d~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~~~~--v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~  190 (286)
                      |++|||||....          ....+++|+.++.++++++...-  ..+||++||............|+.+|...+.+.
T Consensus       107 D~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~  186 (267)
T 3u5t_A          107 DVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTSQVGLLHPSYGIYAAAKAGVEAMT  186 (267)
T ss_dssp             EEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCTHHHHCCTTCHHHHHHHHHHHHHH
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeChhhccCCCCchHHHHHHHHHHHHH
Confidence            999999997531          13456799999999999887642  248999999643333445678999999999877


Q ss_pred             HH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhc
Q 023205          191 LT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAAT  264 (286)
Q Consensus       191 ~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~  264 (286)
                      +.      ..|+++++++||.+..+......  .    ....+.+..      ..|     ...+.+++|+|++++.++.
T Consensus       187 ~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~--~----~~~~~~~~~------~~p-----~~r~~~pedvA~~v~~L~s  249 (267)
T 3u5t_A          187 HVLSKELRGRDITVNAVAPGPTATDLFLEGK--S----DEVRDRFAK------LAP-----LERLGTPQDIAGAVAFLAG  249 (267)
T ss_dssp             HHHHHHTTTSCCEEEEEEECCBC-----------------CHHHHHT------SST-----TCSCBCHHHHHHHHHHHHS
T ss_pred             HHHHHHhhhhCCEEEEEEECCCcCccccccC--C----HHHHHHHHh------cCC-----CCCCcCHHHHHHHHHHHhC
Confidence            53      35899999999999765421110  0    011111111      112     2346789999999999997


Q ss_pred             CCC--CCCCeeEeccc
Q 023205          265 DPV--FPPGIVDVHGI  278 (286)
Q Consensus       265 ~~~--~~~~~~~l~~~  278 (286)
                      ...  ..|+++++.|+
T Consensus       250 ~~~~~itG~~i~vdGG  265 (267)
T 3u5t_A          250 PDGAWVNGQVLRANGG  265 (267)
T ss_dssp             TTTTTCCSEEEEESSS
T ss_pred             ccccCccCCEEEeCCC
Confidence            543  46889999876

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=99.88  E-value=1.2e-21  Score=165.25  Aligned_cols=210  Identities=12%  Similarity=0.067  Sum_probs=150.7

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc-----cccCCceeEEeccCCCHhHHHHHhc------CCC
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD------GVT  123 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~-----~~~~~~~~~i~~Dl~d~~~~~~~~~------~~d  123 (286)
                      ..++++||||+|+||++++++|+++|++|++++|+.++...     .....++.++.+|++|.+++.++++      .+|
T Consensus        32 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~g~iD  111 (275)
T 4imr_A           32 RGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAIAPVD  111 (275)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHhCCCC
Confidence            35799999999999999999999999999999998765322     1124578999999999988887775      689


Q ss_pred             EEEEccccCCC----------cchhhhhhhHHHHHHHHHHH----HcCCCEEEEEecCCcCCCCccccchHHHHHHHHHH
Q 023205          124 AVISCVGGFGS----------NSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEGKRAAETE  189 (286)
Q Consensus       124 ~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~----~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~  189 (286)
                      ++|||||....          ....+++|+.++.++++++.    +.+..+||++||............|+.+|...+.+
T Consensus       112 ~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l  191 (275)
T 4imr_A          112 ILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQLRPKSVVTAYAATKAAQHNL  191 (275)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCCCCchhhHHHHHHHHHH
Confidence            99999996421          13467899999999988873    45567999999954333344456799999999987


Q ss_pred             HHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHh
Q 023205          190 LLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAA  263 (286)
Q Consensus       190 ~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l  263 (286)
                      .+.      ..|+++++++||.+..+........    .......+....     .|.     ..+..++|+|++++.++
T Consensus       192 ~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~----~~~~~~~~~~~~-----~p~-----~r~~~pedvA~~v~fL~  257 (275)
T 4imr_A          192 IQSQARDFAGDNVLLNTLAPGLVDTDRNADRRAQ----DPEGWDEYVRTL-----NWM-----GRAGRPEEMVGAALFLA  257 (275)
T ss_dssp             HHHHHHHHGGGTEEEEEEEESSBCSHHHHHHHHH----CHHHHHHHHHHH-----STT-----CSCBCGGGGHHHHHHHH
T ss_pred             HHHHHHHhcccCcEEEEEEeccccCccccccccc----ChHHHHHHHhhc-----Ccc-----CCCcCHHHHHHHHHHHc
Confidence            653      4589999999999975432100000    000011111111     011     23578999999999999


Q ss_pred             cCC--CCCCCeeEeccc
Q 023205          264 TDP--VFPPGIVDVHGI  278 (286)
Q Consensus       264 ~~~--~~~~~~~~l~~~  278 (286)
                      ...  ...|+++++.|+
T Consensus       258 s~~a~~itG~~i~vdGG  274 (275)
T 4imr_A          258 SEACSFMTGETIFLTGG  274 (275)
T ss_dssp             SGGGTTCCSCEEEESSC
T ss_pred             CcccCCCCCCEEEeCCC
Confidence            754  346899999875

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=99.88  E-value=8.8e-21  Score=156.28  Aligned_cols=203  Identities=13%  Similarity=0.139  Sum_probs=150.0

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc-cccCCceeEEeccCCCHhHHHHHhc-------CCCEEE
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-DSWANNVIWHQGNLLSSDSWKEALD-------GVTAVI  126 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~-~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d~vi  126 (286)
                      |.|+|+||||++.||+++++.|+++|++|++.+|+.+.... .....++..+++|++|+++++++++       ++|++|
T Consensus         1 MnK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDiLV   80 (247)
T 3ged_A            1 MNRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDVLV   80 (247)
T ss_dssp             -CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            45799999999999999999999999999999998654221 1223578899999999988887764       689999


Q ss_pred             EccccCCC----------cchhhhhhhHHHHHHHHHHHHc---CCCEEEEEecCCcCCCCccccchHHHHHHHHHHHHH-
Q 023205          127 SCVGGFGS----------NSYMYKINGTANINAIRAASEK---GVKRFVYISAADFGVANYLLQGYYEGKRAAETELLT-  192 (286)
Q Consensus       127 ~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~~~---~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~~-  192 (286)
                      ||||....          +...+++|+.++..+.+++...   +-.++|++||...-...+....|+.+|...+.+.+. 
T Consensus        81 NNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~G~IInisS~~~~~~~~~~~~Y~asKaal~~ltk~l  160 (247)
T 3ged_A           81 NNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNKGRIINIASTRAFQSEPDSEAYASAKGGIVALTHAL  160 (247)
T ss_dssp             ECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHH
T ss_pred             ECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCcEEEEeecccccCCCCCHHHHHHHHHHHHHHHHH
Confidence            99986531          2456789999998887776432   225899999964333334456899999999886653 


Q ss_pred             ----hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcCCCC
Q 023205          193 ----RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDPVF  268 (286)
Q Consensus       193 ----~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~~~  268 (286)
                          ..+++++.|.||.+-.+....           ..+....      .+|+     ..+...+|+|++++.++.....
T Consensus       161 A~ela~~IrVN~I~PG~i~t~~~~~-----------~~~~~~~------~~Pl-----~R~g~pediA~~v~fL~s~~~i  218 (247)
T 3ged_A          161 AMSLGPDVLVNCIAPGWINVTEQQE-----------FTQEDCA------AIPA-----GKVGTPKDISNMVLFLCQQDFI  218 (247)
T ss_dssp             HHHHTTTSEEEEEEECSBCCCC--------------CCHHHHH------TSTT-----SSCBCHHHHHHHHHHHHHCSSC
T ss_pred             HHHHCCCCEEEEEecCcCCCCCcHH-----------HHHHHHh------cCCC-----CCCcCHHHHHHHHHHHHhCCCC
Confidence                348999999999986443211           1111111      2333     2357899999999999987667


Q ss_pred             CCCeeEecccc
Q 023205          269 PPGIVDVHGIL  279 (286)
Q Consensus       269 ~~~~~~l~~~~  279 (286)
                      .|+++.+.|+.
T Consensus       219 TG~~i~VDGG~  229 (247)
T 3ged_A          219 TGETIIVDGGM  229 (247)
T ss_dssp             CSCEEEESTTG
T ss_pred             CCCeEEECcCH
Confidence            89999999874

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=99.88  E-value=1.1e-21  Score=164.50  Aligned_cols=220  Identities=12%  Similarity=0.022  Sum_probs=152.3

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc------c-ccCCceeEEeccCCCHhHHHHHhc-------
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------D-SWANNVIWHQGNLLSSDSWKEALD-------  120 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~------~-~~~~~~~~i~~Dl~d~~~~~~~~~-------  120 (286)
                      ..++++||||+|+||++++++|+++|++|++++|+.++...      . ....++.++.+|++|+++++++++       
T Consensus         7 ~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   86 (265)
T 3lf2_A            7 SEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERTLG   86 (265)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            35789999999999999999999999999999998654211      1 112358999999999998887764       


Q ss_pred             CCCEEEEccccCCC----------cchhhhhhhHHHHHHHHHHHH----cCCCEEEEEecCCcCCCCccccchHHHHHHH
Q 023205          121 GVTAVISCVGGFGS----------NSYMYKINGTANINAIRAASE----KGVKRFVYISAADFGVANYLLQGYYEGKRAA  186 (286)
Q Consensus       121 ~~d~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~~----~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~  186 (286)
                      .+|++|||||....          ....+++|+.++.++++++..    .+..+||++||............|+.+|...
T Consensus        87 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~  166 (265)
T 3lf2_A           87 CASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQPEPHMVATSAARAGV  166 (265)
T ss_dssp             SCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGTSCCTTBHHHHHHHHHH
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccCCCCCCchhhHHHHHHH
Confidence            67999999996532          135678999999999988854    3345899999954333344567899999999


Q ss_pred             HHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHH
Q 023205          187 ETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAV  260 (286)
Q Consensus       187 E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~  260 (286)
                      +.+.+.      ..|+++++++||.+..+............ ....+.+.........+|.     ..+.+++|+|++++
T Consensus       167 ~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~p~-----~r~~~pedvA~~v~  240 (265)
T 3lf2_A          167 KNLVRSMAFEFAPKGVRVNGILIGLVESGQWRRRFEAREER-ELDWAQWTAQLARNKQIPL-----GRLGKPIEAARAIL  240 (265)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTC-------CHHHHHHHHHHHTTCTT-----CSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHhcccCeEEEEEEeCcCcCchhhhhhhhhhhh-ccCHHHHHHHHhhccCCCc-----CCCcCHHHHHHHHH
Confidence            987653      46899999999999765321100000000 0000111111111111222     34678999999999


Q ss_pred             HHhcCC--CCCCCeeEeccccc
Q 023205          261 RAATDP--VFPPGIVDVHGILR  280 (286)
Q Consensus       261 ~~l~~~--~~~~~~~~l~~~~~  280 (286)
                      .++...  ...|+++++.|+..
T Consensus       241 fL~s~~~~~itG~~i~vdGG~~  262 (265)
T 3lf2_A          241 FLASPLSAYTTGSHIDVSGGLS  262 (265)
T ss_dssp             HHHSGGGTTCCSEEEEESSSCC
T ss_pred             HHhCchhcCcCCCEEEECCCCc
Confidence            999743  35688999988753

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=99.88  E-value=3.8e-21  Score=162.32  Aligned_cols=215  Identities=15%  Similarity=0.109  Sum_probs=150.9

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCc------------ccc------cccCCceeEEeccCCCHhHHH
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRS------------SLR------DSWANNVIWHQGNLLSSDSWK  116 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~------------~~~------~~~~~~~~~i~~Dl~d~~~~~  116 (286)
                      ..++++||||+|+||++++++|+++|++|++++|+...            ...      .....++.++.+|++|+++++
T Consensus        10 ~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (277)
T 3tsc_A           10 EGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDRLR   89 (277)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHH
Confidence            45789999999999999999999999999999985221            000      112357899999999999888


Q ss_pred             HHhc-------CCCEEEEccccCCC----------cchhhhhhhHHHHHHHHHHHH----cC-CCEEEEEecCCcCCCCc
Q 023205          117 EALD-------GVTAVISCVGGFGS----------NSYMYKINGTANINAIRAASE----KG-VKRFVYISAADFGVANY  174 (286)
Q Consensus       117 ~~~~-------~~d~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~~----~~-v~~~v~~Ss~~~~~~~~  174 (286)
                      ++++       .+|++|||||....          ....+++|+.++.++++++..    .+ ..+||++||........
T Consensus        90 ~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  169 (277)
T 3tsc_A           90 KVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMKMQP  169 (277)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCS
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccHhhCCCCC
Confidence            7775       58999999997532          135678999999988887643    33 35899999964333344


Q ss_pred             cccchHHHHHHHHHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHh---cccCCCCCCCCCc
Q 023205          175 LLQGYYEGKRAAETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQH---AKPLSQLPLVGPL  245 (286)
Q Consensus       175 ~~~~y~~sK~~~E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~g~~  245 (286)
                      ....|+.+|...+.+.+.      ..|+++++++||.+..+.....          ........   ....... .....
T Consensus       170 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~----------~~~~~~~~~~~~~~~~~~-~~~~~  238 (277)
T 3tsc_A          170 FMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSGD----------MVTAVGQAMETNPQLSHV-LTPFL  238 (277)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGGGSHH----------HHHHHHHHHHTCGGGTTT-TCCSS
T ss_pred             CchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCcccch----------hhhhhhhcccccHHHHHH-hhhcc
Confidence            567899999999987753      4689999999999976643211          00001100   0000000 00011


Q ss_pred             cCCCccHHHHHHHHHHHhcCCC--CCCCeeEeccccc
Q 023205          246 FTPPVNVTVVAKVAVRAATDPV--FPPGIVDVHGILR  280 (286)
Q Consensus       246 ~~~~i~v~Dva~~~~~~l~~~~--~~~~~~~l~~~~~  280 (286)
                      ...+.+++|+|++++.++..+.  ..|+++++.|+..
T Consensus       239 p~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~  275 (277)
T 3tsc_A          239 PDWVAEPEDIADTVCWLASDESRKVTAAQIPVDQGST  275 (277)
T ss_dssp             SCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             CCCCCCHHHHHHHHHHHhCccccCCcCCEEeeCCCcc
Confidence            1247899999999999997543  5689999988753

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=99.88  E-value=2.3e-21  Score=165.57  Aligned_cols=203  Identities=17%  Similarity=0.081  Sum_probs=140.6

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc-----cccCCceeEEeccCCCHhHHHHHhc-------CC
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------GV  122 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~-----~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~  122 (286)
                      ..++||||||+|+||++++++|+++|++|++++|+.++...     .....++.++.+|++|.++++++++       ++
T Consensus        30 ~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  109 (301)
T 3tjr_A           30 DGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLGGV  109 (301)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhCCCC
Confidence            45789999999999999999999999999999998654211     1123578999999999999888775       68


Q ss_pred             CEEEEccccCCC----------cchhhhhhhHHHHHHHHHHHH----cC-CCEEEEEecCCcCCCCccccchHHHHHHHH
Q 023205          123 TAVISCVGGFGS----------NSYMYKINGTANINAIRAASE----KG-VKRFVYISAADFGVANYLLQGYYEGKRAAE  187 (286)
Q Consensus       123 d~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~~----~~-v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E  187 (286)
                      |+||||||....          ....+++|+.++.++++++..    .+ ..+||++||...-........|+.+|...+
T Consensus       110 d~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~  189 (301)
T 3tjr_A          110 DVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPNAGLGTYGVAKYGVV  189 (301)
T ss_dssp             SEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCTTBHHHHHHHHHHH
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCCCchHHHHHHHHHH
Confidence            999999996531          135678999999999888743    33 458999999543333445678999999998


Q ss_pred             HHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCC--CccCCCccHHHHHHHH
Q 023205          188 TELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVG--PLFTPPVNVTVVAKVA  259 (286)
Q Consensus       188 ~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--~~~~~~i~v~Dva~~~  259 (286)
                      .+.+.      ..|+++++++||.+..+.........          .........+....+  .....+++++|+|+++
T Consensus       190 ~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~i  259 (301)
T 3tjr_A          190 GLAETLAREVKPNGIGVSVLCPMVVETKLVSNSERIR----------GADYGMSATPEGAFGPLPTQDESVSADDVARLT  259 (301)
T ss_dssp             HHHHHHHHHHGGGTEEEEEECCSCCCSSHHHHHHHHC--------------------------------CCCHHHHHHHH
T ss_pred             HHHHHHHHHhcccCcEEEEEECCcccccccccccccc----------chhhccccChhhhccccccccCCCCHHHHHHHH
Confidence            86653      46899999999999754321000000          000000000000001  1234589999999999


Q ss_pred             HHHhcCCC
Q 023205          260 VRAATDPV  267 (286)
Q Consensus       260 ~~~l~~~~  267 (286)
                      +.+++.+.
T Consensus       260 ~~~l~~~~  267 (301)
T 3tjr_A          260 ADAILANR  267 (301)
T ss_dssp             HHHHHHTC
T ss_pred             HHHHhcCC
Confidence            99998754

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=99.87  E-value=6.7e-21  Score=158.13  Aligned_cols=194  Identities=15%  Similarity=0.055  Sum_probs=139.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc---c--ccCCceeEEeccCCCHhHHHHHhc-------CCC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR---D--SWANNVIWHQGNLLSSDSWKEALD-------GVT  123 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~---~--~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d  123 (286)
                      .++++||||+|+||++++++|+++|++|++++|+.++...   +  ....++.++.+|++|+++++++++       ++|
T Consensus         7 ~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id   86 (247)
T 2jah_A            7 GKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEALGGLD   86 (247)
T ss_dssp             TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            5789999999999999999999999999999998643211   0  113478899999999998887765       689


Q ss_pred             EEEEccccCCC----------cchhhhhhhHHHHHHHHHHHH----cCCCEEEEEecCCcCCCCccccchHHHHHHHHHH
Q 023205          124 AVISCVGGFGS----------NSYMYKINGTANINAIRAASE----KGVKRFVYISAADFGVANYLLQGYYEGKRAAETE  189 (286)
Q Consensus       124 ~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~~----~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~  189 (286)
                      ++|||||....          ....+++|+.++.++++++..    .+ .+||++||............|+.+|...+.+
T Consensus        87 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~  165 (247)
T 2jah_A           87 ILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK-GTVVQMSSIAGRVNVRNAAVYQATKFGVNAF  165 (247)
T ss_dssp             EEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTCCCTTCHHHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CEEEEEccHHhcCCCCCCcHHHHHHHHHHHH
Confidence            99999986421          134678999999998888753    45 7999999953323334466899999998886


Q ss_pred             HHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHh
Q 023205          190 LLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAA  263 (286)
Q Consensus       190 ~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l  263 (286)
                      .+.      ..|+++++++||.+..+.....   .    ..........      .|    ....+++.+|+|++++.++
T Consensus       166 ~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~---~----~~~~~~~~~~------~~----~~~~~~~pedvA~~v~~l~  228 (247)
T 2jah_A          166 SETLRQEVTERGVRVVVIEPGTTDTELRGHI---T----HTATKEMYEQ------RI----SQIRKLQAQDIAEAVRYAV  228 (247)
T ss_dssp             HHHHHHHHGGGTCEEEEEEECSBSSSGGGGC---C----CHHHHHHHHH------HT----TTSCCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHhcccCcEEEEEECCCCCCcchhcc---c----chhhHHHHHh------cc----cccCCCCHHHHHHHHHHHh
Confidence            642      4689999999999976542110   0    0000101110      11    1112589999999999999


Q ss_pred             cCCC
Q 023205          264 TDPV  267 (286)
Q Consensus       264 ~~~~  267 (286)
                      ..+.
T Consensus       229 s~~~  232 (247)
T 2jah_A          229 TAPH  232 (247)
T ss_dssp             HSCT
T ss_pred             CCCc
Confidence            7654

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=99.87  E-value=2.6e-20  Score=152.48  Aligned_cols=207  Identities=15%  Similarity=0.145  Sum_probs=151.9

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhc---CCCEEEEcccc
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD---GVTAVISCVGG  131 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~---~~d~vi~~a~~  131 (286)
                      ..|+++||||++.||+.+++.|+++|++|++.+|+.+.. ......++..+++|++|+++++++++   .+|++|||||.
T Consensus        10 ~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~-~~~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDiLVNNAGi   88 (242)
T 4b79_A           10 AGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGV-HAPRHPRIRREELDITDSQRLQRLFEALPRLDVLVNNAGI   88 (242)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTST-TSCCCTTEEEEECCTTCHHHHHHHHHHCSCCSEEEECCCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH-hhhhcCCeEEEEecCCCHHHHHHHHHhcCCCCEEEECCCC
Confidence            378999999999999999999999999999999987663 33345689999999999999888775   58999999996


Q ss_pred             CCC--------cchhhhhhhHHHHHHHHHHHH----cCCCEEEEEecCCcCCCCccccchHHHHHHHHHHHHH------h
Q 023205          132 FGS--------NSYMYKINGTANINAIRAASE----KGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLT------R  193 (286)
Q Consensus       132 ~~~--------~~~~~~~~~~~~~~l~~~a~~----~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~~------~  193 (286)
                      ..+        +...+++|+.++..+.+++..    .+ .+||++||...-........|+.+|...+.+.+.      .
T Consensus        89 ~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~-G~IVnisS~~~~~~~~~~~~Y~asKaav~~ltr~lA~Ela~  167 (242)
T 4b79_A           89 SRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRG-GSILNIASMYSTFGSADRPAYSASKGAIVQLTRSLACEYAA  167 (242)
T ss_dssp             CCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHC-EEEEEECCGGGTSCCSSCHHHHHHHHHHHHHHHHHHHHHGG
T ss_pred             CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CeEEEEeeccccCCCCCCHHHHHHHHHHHHHHHHHHHHhhh
Confidence            532        235678999999888777643    33 5899999964333334456899999999986652      5


Q ss_pred             CCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcCC--CCCCC
Q 023205          194 YPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDP--VFPPG  271 (286)
Q Consensus       194 ~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~--~~~~~  271 (286)
                      .|++++.|.||.+..|......       . ..+.......   .+|+     ..+...+|+|++++.++...  ...|+
T Consensus       168 ~gIrVNaV~PG~i~T~m~~~~~-------~-~~~~~~~~~~---~~Pl-----gR~g~peeiA~~v~fLaSd~a~~iTG~  231 (242)
T 4b79_A          168 ERIRVNAIAPGWIDTPLGAGLK-------A-DVEATRRIMQ---RTPL-----ARWGEAPEVASAAAFLCGPGASFVTGA  231 (242)
T ss_dssp             GTEEEEEEEECSBCCC-----C-------C-CHHHHHHHHH---TCTT-----CSCBCHHHHHHHHHHHTSGGGTTCCSC
T ss_pred             cCeEEEEEEeCCCCChhhhccc-------C-CHHHHHHHHh---cCCC-----CCCcCHHHHHHHHHHHhCchhcCccCc
Confidence            7999999999999765432111       0 0111111111   2333     24578899999999998653  35689


Q ss_pred             eeEecccc
Q 023205          272 IVDVHGIL  279 (286)
Q Consensus       272 ~~~l~~~~  279 (286)
                      ++.+.|+-
T Consensus       232 ~l~VDGG~  239 (242)
T 4b79_A          232 VLAVDGGY  239 (242)
T ss_dssp             EEEESTTG
T ss_pred             eEEECccH
Confidence            99998874

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=99.87  E-value=1.1e-21  Score=164.22  Aligned_cols=212  Identities=14%  Similarity=0.099  Sum_probs=145.1

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcc--cc------cccCCceeEEeccCCCHhHHHHHhc------
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSS--LR------DSWANNVIWHQGNLLSSDSWKEALD------  120 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~--~~------~~~~~~~~~i~~Dl~d~~~~~~~~~------  120 (286)
                      ..++++||||+|+||++++++|+++|++|+++.|.....  ..      .....++.++.+|++|+++++++++      
T Consensus        10 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   89 (262)
T 3ksu_A           10 KNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEKEF   89 (262)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            467999999999999999999999999999998864321  10      1123578999999999999888775      


Q ss_pred             -CCCEEEEccccCCC----------cchhhhhhhHHHHHHHHHHHHc--CCCEEEEEecCCcCCCCccccchHHHHHHHH
Q 023205          121 -GVTAVISCVGGFGS----------NSYMYKINGTANINAIRAASEK--GVKRFVYISAADFGVANYLLQGYYEGKRAAE  187 (286)
Q Consensus       121 -~~d~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~~~--~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E  187 (286)
                       ++|++|||||....          ....+++|+.++.++++++...  +..+||++||............|+.+|...+
T Consensus        90 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~  169 (262)
T 3ksu_A           90 GKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIATSLLAAYTGFYSTYAGNKAPVE  169 (262)
T ss_dssp             CSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECCCHHHHHHCCCCC-----CHHH
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEechhhccCCCCCchhHHHHHHHH
Confidence             68999999996532          1245689999999999998764  3358999999532222334567999999999


Q ss_pred             HHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHH
Q 023205          188 TELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVR  261 (286)
Q Consensus       188 ~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~  261 (286)
                      .+.+.      ..|+++++++||.+..+...... .     ..    .....  ....     ....+.+++|+|++++.
T Consensus       170 ~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~-~-----~~----~~~~~--~~~~-----~~~r~~~pedvA~~v~~  232 (262)
T 3ksu_A          170 HYTRAASKELMKQQISVNAIAPGPMDTSFFYGQE-T-----KE----STAFH--KSQA-----MGNQLTKIEDIAPIIKF  232 (262)
T ss_dssp             HHHHHHHHHTTTTTCEEEEEEECCCCTHHHHTCC-----------------------------CCCCSCCGGGTHHHHHH
T ss_pred             HHHHHHHHHHHHcCcEEEEEeeCCCcCccccccC-c-----hH----HHHHH--HhcC-----cccCCCCHHHHHHHHHH
Confidence            87753      45899999999998643211100 0     00    00000  0011     12346789999999999


Q ss_pred             HhcCCC-CCCCeeEecccccccc
Q 023205          262 AATDPV-FPPGIVDVHGILRYSQ  283 (286)
Q Consensus       262 ~l~~~~-~~~~~~~l~~~~~~s~  283 (286)
                      ++.... ..|+.+++.|+....+
T Consensus       233 L~s~~~~itG~~i~vdGg~~~~~  255 (262)
T 3ksu_A          233 LTTDGWWINGQTIFANGGYTTRE  255 (262)
T ss_dssp             HHTTTTTCCSCEEEESTTCCCC-
T ss_pred             HcCCCCCccCCEEEECCCccCCC
Confidence            997622 4689999999766544

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=99.87  E-value=1.5e-21  Score=165.52  Aligned_cols=207  Identities=15%  Similarity=0.065  Sum_probs=149.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC---eEEEEecCCCcccc------cc-cCCceeEEeccCCCHhHHHHHhc-----
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGL---TVASLSRSGRSSLR------DS-WANNVIWHQGNLLSSDSWKEALD-----  120 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~---~V~~l~R~~~~~~~------~~-~~~~~~~i~~Dl~d~~~~~~~~~-----  120 (286)
                      .++++||||+|+||++++++|+++|+   +|+++.|+.++...      .. ...++.++.+|++|+++++++++     
T Consensus        33 ~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  112 (287)
T 3rku_A           33 KKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLPQE  112 (287)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSCGG
T ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHh
Confidence            57899999999999999999999987   99999998654211      00 13578899999999999988876     


Q ss_pred             --CCCEEEEccccCCC-----------cchhhhhhhHHHHHHHHHH----HHcCCCEEEEEecCCcCCCCccccchHHHH
Q 023205          121 --GVTAVISCVGGFGS-----------NSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGK  183 (286)
Q Consensus       121 --~~d~vi~~a~~~~~-----------~~~~~~~~~~~~~~l~~~a----~~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK  183 (286)
                        ++|++|||||....           ....+++|+.++.++++++    ++.+..+||++||...-........|+.+|
T Consensus       113 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~~~Y~asK  192 (287)
T 3rku_A          113 FKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDAYPTGSIYCASK  192 (287)
T ss_dssp             GCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             cCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECChhhcCCCCCCchHHHHH
Confidence              57999999996421           1356789999999998887    445667999999964333344567899999


Q ss_pred             HHHHHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHH
Q 023205          184 RAAETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAK  257 (286)
Q Consensus       184 ~~~E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~  257 (286)
                      ...+.+.+.      ..|+++++++||.+..+......       ....+.......           ...++.++|+|+
T Consensus       193 aa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~-------~~~~~~~~~~~~-----------~~~p~~pedvA~  254 (287)
T 3rku_A          193 FAVGAFTDSLRKELINTKIRVILIAPGLVETEFSLVRY-------RGNEEQAKNVYK-----------DTTPLMADDVAD  254 (287)
T ss_dssp             HHHHHHHHHHHHHTTTSSCEEEEEEESCEESSHHHHHT-------TTCHHHHHHHHT-----------TSCCEEHHHHHH
T ss_pred             HHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCccccccc-------cCcHHHHHHhhc-----------ccCCCCHHHHHH
Confidence            999987653      46899999999999865311000       000011111111           012458999999


Q ss_pred             HHHHHhcCCCC--CCCeeEeccccc
Q 023205          258 VAVRAATDPVF--PPGIVDVHGILR  280 (286)
Q Consensus       258 ~~~~~l~~~~~--~~~~~~l~~~~~  280 (286)
                      +++.++..+..  .++++.+.+.+.
T Consensus       255 ~v~~l~s~~~~~i~g~~i~v~~g~~  279 (287)
T 3rku_A          255 LIVYATSRKQNTVIADTLIFPTNQA  279 (287)
T ss_dssp             HHHHHHTSCTTEEEEEEEEEETTEE
T ss_pred             HHHHHhCCCCCeEecceEEeeCCCC
Confidence            99999987653  467788877554

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=99.87  E-value=1.2e-20  Score=160.01  Aligned_cols=208  Identities=14%  Similarity=0.147  Sum_probs=150.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCC-Ccccc---c---ccCCceeEEeccCCC----HhHHHHHhc----
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSG-RSSLR---D---SWANNVIWHQGNLLS----SDSWKEALD----  120 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~-~~~~~---~---~~~~~~~~i~~Dl~d----~~~~~~~~~----  120 (286)
                      .++++||||+|+||++++++|+++|++|++++|+. ++...   +   ....++.++.+|++|    +++++++++    
T Consensus        23 ~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~~~  102 (288)
T 2x9g_A           23 APAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIINSCFR  102 (288)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHHHHHH
Confidence            57899999999999999999999999999999987 33110   1   123578999999999    888877765    


Q ss_pred             ---CCCEEEEccccCCC---------c-----------chhhhhhhHHHHHHHHHHHHc----C------CCEEEEEecC
Q 023205          121 ---GVTAVISCVGGFGS---------N-----------SYMYKINGTANINAIRAASEK----G------VKRFVYISAA  167 (286)
Q Consensus       121 ---~~d~vi~~a~~~~~---------~-----------~~~~~~~~~~~~~l~~~a~~~----~------v~~~v~~Ss~  167 (286)
                         ++|+||||||....         .           ...+++|+.++.++++++...    +      ..+||++||.
T Consensus       103 ~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~  182 (288)
T 2x9g_A          103 AFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDA  182 (288)
T ss_dssp             HHSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCCEEEEEECCT
T ss_pred             hcCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCCeEEEEEecc
Confidence               68999999986421         1           135678999999998887643    2      3589999996


Q ss_pred             CcCCCCccccchHHHHHHHHHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCC
Q 023205          168 DFGVANYLLQGYYEGKRAAETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPL  241 (286)
Q Consensus       168 ~~~~~~~~~~~y~~sK~~~E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (286)
                      ...........|+.+|...+.+.+.      ..|+++++|+||.+.++. . .  .     ......+..      ..|.
T Consensus       183 ~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~-~-~--~-----~~~~~~~~~------~~p~  247 (288)
T 2x9g_A          183 MVDQPCMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV-A-M--G-----EEEKDKWRR------KVPL  247 (288)
T ss_dssp             TTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSCCT-T-S--C-----HHHHHHHHH------TCTT
T ss_pred             cccCCCCCCchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccCcc-c-c--C-----hHHHHHHHh------hCCC
Confidence            4333344567899999988886653      458999999999998875 2 1  0     001111111      1121


Q ss_pred             CCCccCCC-ccHHHHHHHHHHHhcCC--CCCCCeeEecccccccc
Q 023205          242 VGPLFTPP-VNVTVVAKVAVRAATDP--VFPPGIVDVHGILRYSQ  283 (286)
Q Consensus       242 ~g~~~~~~-i~v~Dva~~~~~~l~~~--~~~~~~~~l~~~~~~s~  283 (286)
                           ..+ .+.+|+|++++.++...  ...|+.+.+.|+..+.+
T Consensus       248 -----~r~~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~~~~  287 (288)
T 2x9g_A          248 -----GRREASAEQIADAVIFLVSGSAQYITGSIIKVDGGLSLVH  287 (288)
T ss_dssp             -----TSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCC
T ss_pred             -----CCCCCCHHHHHHHHHHHhCccccCccCCEEEECcchhhhc
Confidence                 124 68999999999999753  35688999998866543

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=99.87  E-value=1.3e-20  Score=156.89  Aligned_cols=210  Identities=20%  Similarity=0.145  Sum_probs=150.5

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc------cccCCceeEEeccCCCHhHHHHHhcC-------
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALDG-------  121 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~------~~~~~~~~~i~~Dl~d~~~~~~~~~~-------  121 (286)
                      ..++++||||+|+||++++++|+++|++|+++.++......      .....++.++.+|++|.++++.+++.       
T Consensus         6 ~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   85 (255)
T 3icc_A            6 KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQN   85 (255)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHHhcc
Confidence            35789999999999999999999999999987555433211      11245788999999999888777642       


Q ss_pred             ------CCEEEEccccCCC----------cchhhhhhhHHHHHHHHHHHHc--CCCEEEEEecCCcCCCCccccchHHHH
Q 023205          122 ------VTAVISCVGGFGS----------NSYMYKINGTANINAIRAASEK--GVKRFVYISAADFGVANYLLQGYYEGK  183 (286)
Q Consensus       122 ------~d~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~~~--~v~~~v~~Ss~~~~~~~~~~~~y~~sK  183 (286)
                            +|++|||||....          ....+++|+.++.++++++...  +..+||++||.......+....|+.+|
T Consensus        86 ~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asK  165 (255)
T 3icc_A           86 RTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISLPDFIAYSMTK  165 (255)
T ss_dssp             HHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGTSCCTTBHHHHHHH
T ss_pred             cccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCChhhccCCCCcchhHHhH
Confidence                  8999999996532          1245689999999999998764  234899999954333344567899999


Q ss_pred             HHHHHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHH
Q 023205          184 RAAETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAK  257 (286)
Q Consensus       184 ~~~E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~  257 (286)
                      ...+.+.+.      ..|+++++++||.+..+......       ..  ..........       .....+.+++|+|+
T Consensus       166 aa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~-------~~--~~~~~~~~~~-------~~~~~~~~~~dva~  229 (255)
T 3icc_A          166 GAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAELL-------SD--PMMKQYATTI-------SAFNRLGEVEDIAD  229 (255)
T ss_dssp             HHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSSTTTT-------TS--HHHHHHHHHT-------STTSSCBCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcCeEEEEEEEeeecccchhhhc-------cc--HHHHHhhhcc-------CCcCCCCCHHHHHH
Confidence            999987653      46899999999999876543211       11  1111111111       11234678999999


Q ss_pred             HHHHHhcCC--CCCCCeeEeccccc
Q 023205          258 VAVRAATDP--VFPPGIVDVHGILR  280 (286)
Q Consensus       258 ~~~~~l~~~--~~~~~~~~l~~~~~  280 (286)
                      +++.++...  ...|+++++.|+..
T Consensus       230 ~~~~l~s~~~~~~tG~~i~vdgG~~  254 (255)
T 3icc_A          230 TAAFLASPDSRWVTGQLIDVSGGSC  254 (255)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESSSTT
T ss_pred             HHHHHhCcccCCccCCEEEecCCee
Confidence            999998643  35689999998753

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=99.87  E-value=3.9e-21  Score=165.97  Aligned_cols=209  Identities=17%  Similarity=0.095  Sum_probs=152.0

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEe-cCCCcccc---c---ccCCceeEEeccCCCHh--------------
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLS-RSGRSSLR---D---SWANNVIWHQGNLLSSD--------------  113 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~-R~~~~~~~---~---~~~~~~~~i~~Dl~d~~--------------  113 (286)
                      ..+++|||||+|+||++++++|+++|++|++++ |+.++...   +   ....++.++.+|++|.+              
T Consensus        45 ~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~  124 (328)
T 2qhx_A           45 TVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVT  124 (328)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCC-------CCBC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCCchhccccccccccccc
Confidence            357899999999999999999999999999999 87543111   1   12357899999999988              


Q ss_pred             ---HHHHHhc-------CCCEEEEccccCCC---------------------c---chhhhhhhHHHHHHHHHHHH----
Q 023205          114 ---SWKEALD-------GVTAVISCVGGFGS---------------------N---SYMYKINGTANINAIRAASE----  155 (286)
Q Consensus       114 ---~~~~~~~-------~~d~vi~~a~~~~~---------------------~---~~~~~~~~~~~~~l~~~a~~----  155 (286)
                         +++++++       .+|+||||||....                     .   ...+++|+.++.++++++..    
T Consensus       125 ~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~  204 (328)
T 2qhx_A          125 LFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAG  204 (328)
T ss_dssp             HHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence               8887765       68999999986421                     1   13468899999988887753    


Q ss_pred             cC------CCEEEEEecCCcCCCCccccchHHHHHHHHHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccC
Q 023205          156 KG------VKRFVYISAADFGVANYLLQGYYEGKRAAETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIG  223 (286)
Q Consensus       156 ~~------v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~  223 (286)
                      .+      ..+||++||............|+.+|...+.+.+.      ..|+++++|+||.+..+. . ..       .
T Consensus       205 ~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~-~-~~-------~  275 (328)
T 2qhx_A          205 TPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-D-MP-------P  275 (328)
T ss_dssp             SCGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCC-C-SC-------H
T ss_pred             cCCcCCCCCcEEEEECchhhccCCCCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCCc-c-cc-------H
Confidence            34      56999999964333334567899999999987653      458999999999998765 1 10       0


Q ss_pred             chHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcC--CCCCCCeeEeccccccc
Q 023205          224 SPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATD--PVFPPGIVDVHGILRYS  282 (286)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~--~~~~~~~~~l~~~~~~s  282 (286)
                         .......   ..+|..    ..+.+++|+|++++.++..  ....|+++++.|+..++
T Consensus       276 ---~~~~~~~---~~~p~~----~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~~~  326 (328)
T 2qhx_A          276 ---AVWEGHR---SKVPLY----QRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSLT  326 (328)
T ss_dssp             ---HHHHHHH---TTCTTT----TSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             ---HHHHHHH---hhCCCC----CCCCCHHHHHHHHHHHhCccccCccCcEEEECCCcccC
Confidence               1111111   112221    1367899999999999964  33568999999987654

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=99.87  E-value=8.2e-21  Score=160.89  Aligned_cols=199  Identities=13%  Similarity=0.114  Sum_probs=146.2

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc------------cccCCceeEEeccCCCHhHHHHHhc--
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------------DSWANNVIWHQGNLLSSDSWKEALD--  120 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~------------~~~~~~~~~i~~Dl~d~~~~~~~~~--  120 (286)
                      ..++++||||+|+||++++++|+++|++|++++|+.++...            .....++.++++|++|+++++++++  
T Consensus         8 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   87 (285)
T 3sc4_A            8 RGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAVAKT   87 (285)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHH
Confidence            35789999999999999999999999999999998764211            1113578999999999998888775  


Q ss_pred             -----CCCEEEEccccCCC----------cchhhhhhhHHHHHHHHHHHHc----CCCEEEEEecCCcCCCC-ccccchH
Q 023205          121 -----GVTAVISCVGGFGS----------NSYMYKINGTANINAIRAASEK----GVKRFVYISAADFGVAN-YLLQGYY  180 (286)
Q Consensus       121 -----~~d~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~~~----~v~~~v~~Ss~~~~~~~-~~~~~y~  180 (286)
                           .+|++|||||....          ....+++|+.++.++++++...    +..+||++||....... .....|+
T Consensus        88 ~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~Y~  167 (285)
T 3sc4_A           88 VEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPKWLRPTPYM  167 (285)
T ss_dssp             HHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCCCSGGGSCSHHHH
T ss_pred             HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhccCCCCCCchHH
Confidence                 78999999996531          1345679999999999988654    45699999995322222 4457899


Q ss_pred             HHHHHHHHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHH
Q 023205          181 EGKRAAETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTV  254 (286)
Q Consensus       181 ~sK~~~E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D  254 (286)
                      .+|...+.+.+.      ..|+++++++||++....                 +.......  ..+     ...+.+.+|
T Consensus       168 asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v~t~-----------------~~~~~~~~--~~~-----~~r~~~ped  223 (285)
T 3sc4_A          168 MAKYGMTLCALGIAEELRDAGIASNTLWPRTTVATA-----------------AVQNLLGG--DEA-----MARSRKPEV  223 (285)
T ss_dssp             HHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCBCCH-----------------HHHHHHTS--CCC-----CTTCBCTHH
T ss_pred             HHHHHHHHHHHHHHHHhcccCcEEEEEeCCCccccH-----------------HHHhhccc--ccc-----ccCCCCHHH
Confidence            999999987653      468999999998543221                 11111111  111     234678999


Q ss_pred             HHHHHHHHhcCCC-CCCCeeEecc
Q 023205          255 VAKVAVRAATDPV-FPPGIVDVHG  277 (286)
Q Consensus       255 va~~~~~~l~~~~-~~~~~~~l~~  277 (286)
                      +|++++.++..+. ..|+.+.+.+
T Consensus       224 vA~~~~~l~s~~~~~tG~~i~~dg  247 (285)
T 3sc4_A          224 YADAAYVVLNKPSSYTGNTLLCED  247 (285)
T ss_dssp             HHHHHHHHHTSCTTCCSCEEEHHH
T ss_pred             HHHHHHHHhCCcccccceEEEEcC
Confidence            9999999998764 4567766654

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=99.87  E-value=8.8e-22  Score=163.73  Aligned_cols=201  Identities=10%  Similarity=0.014  Sum_probs=144.7

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc------cc--cCCceeEEeccCCCHhHHHHHhc------
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DS--WANNVIWHQGNLLSSDSWKEALD------  120 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~------~~--~~~~~~~i~~Dl~d~~~~~~~~~------  120 (286)
                      ..+++|||||+|+||++++++|+++|++|++++|+.++...      ..  ...++.++.+|++|.++++++++      
T Consensus         6 ~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   85 (250)
T 3nyw_A            6 QKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQKY   85 (250)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHHhc
Confidence            35789999999999999999999999999999998654211      01  12578899999999998887765      


Q ss_pred             -CCCEEEEccccCCC---------cchhhhhhhHHHHHHHHHH----HHcCCCEEEEEecCCcCCCCccccchHHHHHHH
Q 023205          121 -GVTAVISCVGGFGS---------NSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKRAA  186 (286)
Q Consensus       121 -~~d~vi~~a~~~~~---------~~~~~~~~~~~~~~l~~~a----~~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~  186 (286)
                       .+|++|||||....         ....+++|+.++.++++++    ++.+..+||++||........+...|+.+|...
T Consensus        86 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~  165 (250)
T 3nyw_A           86 GAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAAKYGFADGGIYGSTKFAL  165 (250)
T ss_dssp             CCEEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC-------CCTTHHHHHHHHH
T ss_pred             CCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEccHHhcCCCCCCcchHHHHHHH
Confidence             58999999997532         1356789999999888887    345567999999953222233467899999999


Q ss_pred             HHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHH
Q 023205          187 ETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAV  260 (286)
Q Consensus       187 E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~  260 (286)
                      +.+.+.      ..|+++++++||.+..+..                  ....   ...+     ...+++++|+|++++
T Consensus       166 ~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~------------------~~~~---~~~~-----~~~~~~p~dva~~v~  219 (250)
T 3nyw_A          166 LGLAESLYRELAPLGIRVTTLCPGWVNTDMA------------------KKAG---TPFK-----DEEMIQPDDLLNTIR  219 (250)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEESSBCSHHH------------------HHTT---CCSC-----GGGSBCHHHHHHHHH
T ss_pred             HHHHHHHHHHhhhcCcEEEEEecCcccCchh------------------hhcC---CCcc-----cccCCCHHHHHHHHH
Confidence            987653      4689999999999864311                  1100   1111     134789999999999


Q ss_pred             HHhcCCCC---CCCeeEecccccc
Q 023205          261 RAATDPVF---PPGIVDVHGILRY  281 (286)
Q Consensus       261 ~~l~~~~~---~~~~~~l~~~~~~  281 (286)
                      .++..+..   .+-++.+.+++..
T Consensus       220 ~l~s~~~~~~~~~~~i~vd~~~~~  243 (250)
T 3nyw_A          220 CLLNLSENVCIKDIVFEMKKSIIE  243 (250)
T ss_dssp             HHHTSCTTEECCEEEEEEHHHHHC
T ss_pred             HHHcCCCceEeeEEEEEeeccccc
Confidence            99986552   2345666665543

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=99.87  E-value=1.4e-21  Score=168.47  Aligned_cols=206  Identities=13%  Similarity=0.058  Sum_probs=146.7

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCC----------Ccccc-----cccCCceeEEeccCCCHhHHHHH
Q 023205           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSG----------RSSLR-----DSWANNVIWHQGNLLSSDSWKEA  118 (286)
Q Consensus        54 ~~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~----------~~~~~-----~~~~~~~~~i~~Dl~d~~~~~~~  118 (286)
                      ...+++|||||+|+||++++++|+++|++|++++|+.          +....     .....++.++.+|++|+++++++
T Consensus        25 l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~  104 (322)
T 3qlj_A           25 VDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAGL  104 (322)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHHH
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHH
Confidence            3467899999999999999999999999999999872          11100     11235788999999999998887


Q ss_pred             hc-------CCCEEEEccccCCC----------cchhhhhhhHHHHHHHHHHHHcC----------CCEEEEEecCCcCC
Q 023205          119 LD-------GVTAVISCVGGFGS----------NSYMYKINGTANINAIRAASEKG----------VKRFVYISAADFGV  171 (286)
Q Consensus       119 ~~-------~~d~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~~~~----------v~~~v~~Ss~~~~~  171 (286)
                      ++       .+|++|||||....          ....+++|+.++.++++++....          -.+||++||...-.
T Consensus       105 ~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~  184 (322)
T 3qlj_A          105 IQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQ  184 (322)
T ss_dssp             HHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECCHHHHH
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEcCHHHcc
Confidence            76       68999999997532          13567899999999988875421          13899999953222


Q ss_pred             CCccccchHHHHHHHHHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCc
Q 023205          172 ANYLLQGYYEGKRAAETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPL  245 (286)
Q Consensus       172 ~~~~~~~y~~sK~~~E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  245 (286)
                      .......|+.+|...+.+.+.      ..|+++++|+|| +..+......       ...   ..           ....
T Consensus       185 ~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~~~~~~~-------~~~---~~-----------~~~~  242 (322)
T 3qlj_A          185 GSVGQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTRMTETVF-------AEM---MA-----------TQDQ  242 (322)
T ss_dssp             CBTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSCCSCCSC-------CC---------------------
T ss_pred             CCCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCccchhhh-------hhh---hh-----------cccc
Confidence            233456899999999987753      468999999999 5433221110       000   00           0011


Q ss_pred             cCCCccHHHHHHHHHHHhcCCC--CCCCeeEecccccc
Q 023205          246 FTPPVNVTVVAKVAVRAATDPV--FPPGIVDVHGILRY  281 (286)
Q Consensus       246 ~~~~i~v~Dva~~~~~~l~~~~--~~~~~~~l~~~~~~  281 (286)
                      ...+++++|+|++++.++....  ..|+++++.|+...
T Consensus       243 ~~~~~~pedva~~v~~L~s~~~~~itG~~i~vdGG~~~  280 (322)
T 3qlj_A          243 DFDAMAPENVSPLVVWLGSAEARDVTGKVFEVEGGKIR  280 (322)
T ss_dssp             -CCTTCGGGTHHHHHHHTSGGGGGCCSCEEEEETTEEE
T ss_pred             ccCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCccc
Confidence            2346789999999999986543  46899999987655

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=99.87  E-value=5.3e-21  Score=160.91  Aligned_cols=204  Identities=13%  Similarity=0.078  Sum_probs=140.7

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc--cccC--CceeEEeccCCCHhHHHHHhcC-------CCEE
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSWA--NNVIWHQGNLLSSDSWKEALDG-------VTAV  125 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~--~~~~--~~~~~i~~Dl~d~~~~~~~~~~-------~d~v  125 (286)
                      ++++||||+|+||++++++|+++|++|++++|+.++...  ....  .++.++.+|++|+++++++++.       +|+|
T Consensus        22 k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l  101 (272)
T 2nwq_A           22 STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAMSAAVDNLPEEFATLRGL  101 (272)
T ss_dssp             CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHTCCGGGSSCCEE
T ss_pred             cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            789999999999999999999999999999998644211  1111  3788999999999999988865       5999


Q ss_pred             EEccccCCC-----------cchhhhhhhHHHHHHHHHHH----HcCCC-EEEEEecCCcCCCCccccchHHHHHHHHHH
Q 023205          126 ISCVGGFGS-----------NSYMYKINGTANINAIRAAS----EKGVK-RFVYISAADFGVANYLLQGYYEGKRAAETE  189 (286)
Q Consensus       126 i~~a~~~~~-----------~~~~~~~~~~~~~~l~~~a~----~~~v~-~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~  189 (286)
                      |||||....           ....+++|+.++.++++++.    +.+.. +||++||............|+.+|...+.+
T Consensus       102 vnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~IV~isS~~~~~~~~~~~~Y~asKaa~~~l  181 (272)
T 2nwq_A          102 INNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWPYPGSHVYGGTKAFVEQF  181 (272)
T ss_dssp             EECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGTSCCTTCHHHHHHHHHHHHH
T ss_pred             EECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCchhccCCCCCchHHHHHHHHHHH
Confidence            999986431           12457899999887776664    45666 999999953323334456899999999987


Q ss_pred             HHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHh
Q 023205          190 LLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAA  263 (286)
Q Consensus       190 ~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l  263 (286)
                      .+.      ..|+++++++||.+.++......  .    .. .+....      ...     ...+++.+|+|++++.++
T Consensus       182 ~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~--~----~~-~~~~~~------~~~-----~~~~~~pedvA~~v~~l~  243 (272)
T 2nwq_A          182 SLNLRCDLQGTGVRVTNLEPGLCESEFSLVRF--G----GD-QARYDK------TYA-----GAHPIQPEDIAETIFWIM  243 (272)
T ss_dssp             HHHHHTTCTTSCCEEEEEEECSBC--------------------------------------CCCCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHhCccCeEEEEEEcCCCcCcchhccc--c----cc-hHHHHH------hhc-----cCCCCCHHHHHHHHHHHh
Confidence            753      36899999999999876421100  0    00 000000      000     112479999999999999


Q ss_pred             cCCCC-CCCeeEeccc
Q 023205          264 TDPVF-PPGIVDVHGI  278 (286)
Q Consensus       264 ~~~~~-~~~~~~l~~~  278 (286)
                      ..+.. .++.+.+.+.
T Consensus       244 s~~~~~~g~~i~v~~~  259 (272)
T 2nwq_A          244 NQPAHLNINSLEIMPV  259 (272)
T ss_dssp             TSCTTEEEEEEEEEET
T ss_pred             CCCccCccceEEEeec
Confidence            86542 3455655543

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=99.87  E-value=6e-21  Score=161.38  Aligned_cols=216  Identities=17%  Similarity=0.093  Sum_probs=150.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc--cccCCceeEEeccCCCHhHHHHHhc-------CCCEEE
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSWANNVIWHQGNLLSSDSWKEALD-------GVTAVI  126 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~--~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d~vi  126 (286)
                      .++++||||+|+||++++++|+++|++|++++|+.++...  .....++.++.+|++|.++++++++       .+|++|
T Consensus         5 gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv   84 (281)
T 3zv4_A            5 GEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAHGGNAVGVVGDVRSLQDQKRAAERCLAAFGKIDTLI   84 (281)
T ss_dssp             TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTBTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence            5789999999999999999999999999999998654211  1224578999999999988877765       579999


Q ss_pred             EccccCCC---------------cchhhhhhhHHHHHHHHHHHHc---CCCEEEEEecCCcCCCCccccchHHHHHHHHH
Q 023205          127 SCVGGFGS---------------NSYMYKINGTANINAIRAASEK---GVKRFVYISAADFGVANYLLQGYYEGKRAAET  188 (286)
Q Consensus       127 ~~a~~~~~---------------~~~~~~~~~~~~~~l~~~a~~~---~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~  188 (286)
                      ||||....               ....+++|+.++.++++++...   +-.++|++||............|+.+|...+.
T Consensus        85 nnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~  164 (281)
T 3zv4_A           85 PNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSRGSVVFTISNAGFYPNGGGPLYTATKHAVVG  164 (281)
T ss_dssp             CCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTSSSSSCHHHHHHHHHHHH
T ss_pred             ECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCeEEEEecchhccCCCCCchhHHHHHHHHH
Confidence            99996421               1235679999999998887542   12599999995433333455679999999998


Q ss_pred             HHHH-----hCCCcEEEEeeCeeecCCCCCccc-cCcccc--CchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHH
Q 023205          189 ELLT-----RYPYGGVILRPGFIYGTRTVGGMK-LPLGVI--GSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAV  260 (286)
Q Consensus       189 ~~~~-----~~g~~~~ilRp~~v~g~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~  260 (286)
                      +.+.     ...++++.+.||.+..+....... ......  ....+.+..      .+|     ...+..++|+|++++
T Consensus       165 l~~~la~e~~~~Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~------~~p-----~~r~~~pedvA~~v~  233 (281)
T 3zv4_A          165 LVRQMAFELAPHVRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKS------VLP-----IGRMPALEEYTGAYV  233 (281)
T ss_dssp             HHHHHHHHHTTTSEEEEEEECSSCC--CCCTTCC--------CCHHHHHHH------TCT-----TSSCCCGGGGSHHHH
T ss_pred             HHHHHHHHhcCCCEEEEEECCcCcCCcccccccccccccccchhHHHHHHh------cCC-----CCCCCCHHHHHHHHH
Confidence            7753     234999999999997664321100 000000  001111111      112     134678999999999


Q ss_pred             HHhcCCC---CCCCeeEeccccccc
Q 023205          261 RAATDPV---FPPGIVDVHGILRYS  282 (286)
Q Consensus       261 ~~l~~~~---~~~~~~~l~~~~~~s  282 (286)
                      .++..+.   ..|+++++.|+..+.
T Consensus       234 fL~s~~~~~~itG~~i~vdGG~~~~  258 (281)
T 3zv4_A          234 FFATRGDSLPATGALLNYDGGMGVR  258 (281)
T ss_dssp             HHHSTTTSTTCSSCEEEESSSGGGC
T ss_pred             HhhcccccccccCcEEEECCCCccc
Confidence            9997333   468999999986553

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=99.86  E-value=2e-21  Score=162.65  Aligned_cols=215  Identities=14%  Similarity=0.092  Sum_probs=145.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc---c--ccCCceeEEeccCCCHhHHHHHhc-------CCC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR---D--SWANNVIWHQGNLLSSDSWKEALD-------GVT  123 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~---~--~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d  123 (286)
                      .++++||||+|+||++++++|+++|++|++++|+.++...   +  ....++.++.+|++|+++++++++       ++|
T Consensus         7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   86 (262)
T 1zem_A            7 GKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGKID   86 (262)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence            5789999999999999999999999999999998643211   1  113468899999999998877765       689


Q ss_pred             EEEEccccC-CC----------cchhhhhhhHHHHHHHHHHHH----cCCCEEEEEecCCcCCCCccccchHHHHHHHHH
Q 023205          124 AVISCVGGF-GS----------NSYMYKINGTANINAIRAASE----KGVKRFVYISAADFGVANYLLQGYYEGKRAAET  188 (286)
Q Consensus       124 ~vi~~a~~~-~~----------~~~~~~~~~~~~~~l~~~a~~----~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~  188 (286)
                      +||||||.. ..          ....+++|+.++.++++++..    .+..+||++||............|+.+|...+.
T Consensus        87 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~  166 (262)
T 1zem_A           87 FLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKGAIIA  166 (262)
T ss_dssp             EEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTTBHHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCCchHHHHHHHHHH
Confidence            999999864 21          134678999999988888754    355799999995221222345689999999887


Q ss_pred             HHHH------hCCCcEEEEeeCeeecCCCCCccc-c----CccccCchHH-HHHHhcccCCCCCCCCCccCCCccHHHHH
Q 023205          189 ELLT------RYPYGGVILRPGFIYGTRTVGGMK-L----PLGVIGSPME-MVLQHAKPLSQLPLVGPLFTPPVNVTVVA  256 (286)
Q Consensus       189 ~~~~------~~g~~~~ilRp~~v~g~~~~~~~~-~----~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~i~v~Dva  256 (286)
                      +.+.      ..|+++++|+||.+..+....... .    .........+ ......   ...|.     ..+...+|+|
T Consensus       167 ~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~p~-----~r~~~p~dvA  238 (262)
T 1zem_A          167 LTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMI---GSVPM-----RRYGDINEIP  238 (262)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHH---HTSTT-----SSCBCGGGSH
T ss_pred             HHHHHHHHHHhhCeEEEEEecCCcCcchhhhhccchhhhccccccccCHHHHHHHHH---hcCCC-----CCCcCHHHHH
Confidence            6643      468999999999886542110000 0    0000000000 000000   01122     2367899999


Q ss_pred             HHHHHHhcCC--CCCCCeeEeccc
Q 023205          257 KVAVRAATDP--VFPPGIVDVHGI  278 (286)
Q Consensus       257 ~~~~~~l~~~--~~~~~~~~l~~~  278 (286)
                      ++++.++..+  ...|+.+.+.|+
T Consensus       239 ~~v~~l~s~~~~~itG~~i~vdGG  262 (262)
T 1zem_A          239 GVVAFLLGDDSSFMTGVNLPIAGG  262 (262)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESCC
T ss_pred             HHHHHHcCchhcCcCCcEEecCCC
Confidence            9999999753  346788888763

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=99.86  E-value=2.7e-21  Score=163.49  Aligned_cols=195  Identities=14%  Similarity=0.022  Sum_probs=138.5

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc------cccCCceeEEeccCCCHhHHHHHhc-------C
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD-------G  121 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~------~~~~~~~~~i~~Dl~d~~~~~~~~~-------~  121 (286)
                      ..+++|||||+|+||++++++|+++|++|++++|+.++...      ......+.++.+|++|+++++++++       .
T Consensus        32 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  111 (281)
T 4dry_A           32 EGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAEFAR  111 (281)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            46789999999999999999999999999999998654211      1112235899999999998887775       5


Q ss_pred             CCEEEEccccCCC-----------cchhhhhhhHHHHHHHHHHHH----cC--CCEEEEEecCCcCCCCccccchHHHHH
Q 023205          122 VTAVISCVGGFGS-----------NSYMYKINGTANINAIRAASE----KG--VKRFVYISAADFGVANYLLQGYYEGKR  184 (286)
Q Consensus       122 ~d~vi~~a~~~~~-----------~~~~~~~~~~~~~~l~~~a~~----~~--v~~~v~~Ss~~~~~~~~~~~~y~~sK~  184 (286)
                      +|++|||||....           ....+++|+.++.++.+++..    .+  ..+||++||............|+.+|.
T Consensus       112 iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~asKa  191 (281)
T 4dry_A          112 LDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTPRPNSAPYTATKH  191 (281)
T ss_dssp             CSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTCCCTTCHHHHHHHH
T ss_pred             CCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCCCCCCChhHHHHHH
Confidence            7999999986421           124678999998888777643    32  358999999643334455678999999


Q ss_pred             HHHHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHH
Q 023205          185 AAETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKV  258 (286)
Q Consensus       185 ~~E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~  258 (286)
                      ..+.+.+.      ..|+++++++||.+..+......              ..........     ....+++++|+|++
T Consensus       192 a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~--------------~~~~~~~~~~-----~~~~~~~pedvA~~  252 (281)
T 4dry_A          192 AITGLTKSTALDGRMHDIACGQIDIGNAATDMTARMS--------------TGVLQANGEV-----AAEPTIPIEHIAEA  252 (281)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEEECBCC---------------------CEEECTTSCE-----EECCCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHhcccCeEEEEEEECcCcChhhhhhc--------------chhhhhhhcc-----cccCCCCHHHHHHH
Confidence            99987653      46899999999999765321100              0000000111     12347899999999


Q ss_pred             HHHHhcCCCC
Q 023205          259 AVRAATDPVF  268 (286)
Q Consensus       259 ~~~~l~~~~~  268 (286)
                      ++.++..+..
T Consensus       253 v~fL~s~~~~  262 (281)
T 4dry_A          253 VVYMASLPLS  262 (281)
T ss_dssp             HHHHHHSCTT
T ss_pred             HHHHhCCCcc
Confidence            9999987764

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=99.86  E-value=2.9e-20  Score=153.80  Aligned_cols=213  Identities=14%  Similarity=0.079  Sum_probs=152.0

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc-----cccCCceeEEeccCCCHhHHHHHhc-------C
Q 023205           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------G  121 (286)
Q Consensus        54 ~~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~-----~~~~~~~~~i~~Dl~d~~~~~~~~~-------~  121 (286)
                      ...|+++||||++.||+.+++.|+++|++|++.+|+.++...     .....++.++++|++|+++++++++       .
T Consensus         5 L~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~   84 (254)
T 4fn4_A            5 LKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETYSR   84 (254)
T ss_dssp             GTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            457899999999999999999999999999999998654211     1224578899999999998887764       5


Q ss_pred             CCEEEEccccCCC-----------cchhhhhhhHHHHHHHHHHH----HcCCCEEEEEecCCcCCCCccccchHHHHHHH
Q 023205          122 VTAVISCVGGFGS-----------NSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEGKRAA  186 (286)
Q Consensus       122 ~d~vi~~a~~~~~-----------~~~~~~~~~~~~~~l~~~a~----~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~  186 (286)
                      +|++|||||....           +...+++|+.++..+.+++.    +.+-.+||++||...-........|+.+|...
T Consensus        85 iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g~~~~~~~~~Y~asKaal  164 (254)
T 4fn4_A           85 IDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIRGGFAGAPYTVAKHGL  164 (254)
T ss_dssp             CCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCSSSSCHHHHHHHHHH
T ss_pred             CCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhhcCCCCCChHHHHHHHHH
Confidence            8999999985421           23567899999988877764    34556899999964333334456899999999


Q ss_pred             HHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHH
Q 023205          187 ETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAV  260 (286)
Q Consensus       187 E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~  260 (286)
                      ..+.+.      ..|++++.|.||.+-.+.........    ......+.....     |.     ..+..++|+|++++
T Consensus       165 ~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~----~~~~~~~~~~~~-----~~-----~R~g~pediA~~v~  230 (254)
T 4fn4_A          165 IGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGSSKPS----ELGMRTLTKLMS-----LS-----SRLAEPEDIANVIV  230 (254)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECSBCSSCTTSCSSCC----HHHHHHHHHHHT-----TC-----CCCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHhhhhCeEEEEEEeCCCCCcccccccCCc----HHHHHHHHhcCC-----CC-----CCCcCHHHHHHHHH
Confidence            986652      57999999999999755432221110    001111111111     11     23568899999999


Q ss_pred             HHhcCCC--CCCCeeEeccccc
Q 023205          261 RAATDPV--FPPGIVDVHGILR  280 (286)
Q Consensus       261 ~~l~~~~--~~~~~~~l~~~~~  280 (286)
                      .++.+..  ..|+++.+.|+-.
T Consensus       231 fLaSd~a~~iTG~~i~VDGG~t  252 (254)
T 4fn4_A          231 FLASDEASFVNGDAVVVDGGLT  252 (254)
T ss_dssp             HHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHhCchhcCCcCCEEEeCCCcc
Confidence            9996433  4689999988754

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=99.86  E-value=9.6e-21  Score=157.82  Aligned_cols=213  Identities=12%  Similarity=-0.013  Sum_probs=141.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc--c--ccCCceeEEeccCCCHhHH----HHHhcCCCEEEE
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--D--SWANNVIWHQGNLLSSDSW----KEALDGVTAVIS  127 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~--~--~~~~~~~~i~~Dl~d~~~~----~~~~~~~d~vi~  127 (286)
                      |++++||||+|+||++++++|+++|++|++++|+.++...  +  ....++.++  |..+.+.+    .+.+.++|+|||
T Consensus         1 Mk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~--d~~~v~~~~~~~~~~~g~iD~lv~   78 (254)
T 1zmt_A            1 MSTAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQLKPM--SEQEPAELIEAVTSAYGQVDVLVS   78 (254)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHCTTSEEC--CCCSHHHHHHHHHHHHSCCCEEEE
T ss_pred             CeEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCcEEEE--CHHHHHHHHHHHHHHhCCCCEEEE
Confidence            4689999999999999999999999999999998654211  0  001233333  54443322    122347999999


Q ss_pred             ccccC-CC----------cchhhhhhhHHHHHHHHHHH----HcCCCEEEEEecCCcCCCCccccchHHHHHHHHHHHHH
Q 023205          128 CVGGF-GS----------NSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLT  192 (286)
Q Consensus       128 ~a~~~-~~----------~~~~~~~~~~~~~~l~~~a~----~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~~  192 (286)
                      |||.. ..          ....+++|+.++.++++++.    +.+..+||++||............|+.+|...+.+.+.
T Consensus        79 nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~  158 (254)
T 1zmt_A           79 NDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGACTLANA  158 (254)
T ss_dssp             ECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCTTCHHHHHHHHHHHHHHHH
T ss_pred             CCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCcccccCCCCchHHHHHHHHHHHHHHH
Confidence            99865 21          13467899999998888774    44567999999954333334567899999999987653


Q ss_pred             ------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcCC
Q 023205          193 ------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDP  266 (286)
Q Consensus       193 ------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~  266 (286)
                            ..|+++++++||.++|+........+.  .....+.......   ..|.     ..+.+++|+|++++.++..+
T Consensus       159 la~e~~~~gi~v~~v~PG~v~~~~~~~~~~T~~--~~~~~~~~~~~~~---~~p~-----~~~~~p~dvA~~v~~l~s~~  228 (254)
T 1zmt_A          159 LSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEP--WKTNPEHVAHVKK---VTAL-----QRLGTQKELGELVAFLASGS  228 (254)
T ss_dssp             HHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHH--HTTCHHHHHHHHH---HSSS-----SSCBCHHHHHHHHHHHHTTS
T ss_pred             HHHHhhhcCcEEEEEecCccccccccccCCCcc--cccChHHHHHHhc---cCCC-----CCCcCHHHHHHHHHHHhCcc
Confidence                  458999999999998875432211110  0000011111100   1121     23679999999999999764


Q ss_pred             C--CCCCeeEeccccc
Q 023205          267 V--FPPGIVDVHGILR  280 (286)
Q Consensus       267 ~--~~~~~~~l~~~~~  280 (286)
                      .  ..|+.+++.|+..
T Consensus       229 ~~~~tG~~~~vdgG~~  244 (254)
T 1zmt_A          229 CDYLTGQVFWLAGGFP  244 (254)
T ss_dssp             CGGGTTCEEEESTTCC
T ss_pred             cCCccCCEEEECCCch
Confidence            4  3688999988754

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=99.86  E-value=2.2e-21  Score=160.84  Aligned_cols=196  Identities=13%  Similarity=0.030  Sum_probs=127.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHH---HH---hcCCCEEEEcc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWK---EA---LDGVTAVISCV  129 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~---~~---~~~~d~vi~~a  129 (286)
                      +++++||||+|+||++++++|++ |++|++++|+.+.........++.++.+|+.+.+...   +.   +.++|+|||||
T Consensus         5 ~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~lv~~A   83 (245)
T 3e9n_A            5 KKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAEIEGVEPIESDIVKEVLEEGGVDKLKNLDHVDTLVHAA   83 (245)
T ss_dssp             -CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHTSTTEEEEECCHHHHHHTSSSCGGGTTCSCCSEEEECC
T ss_pred             CCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHhhcCCcceecccchHHHHHHHHHHHHhcCCCCEEEECC
Confidence            57899999999999999999987 8999999998654322222357899999998774421   22   23689999999


Q ss_pred             ccCCC----------cchhhhhhhHHHHHHHHHHH----HcCCCEEEEEecCCcCCCCccccchHHHHHHHHHHHHH---
Q 023205          130 GGFGS----------NSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLT---  192 (286)
Q Consensus       130 ~~~~~----------~~~~~~~~~~~~~~l~~~a~----~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~~---  192 (286)
                      |....          ....+++|+.++.++++++.    +.+ .+||++||............|+.+|...|.+.+.   
T Consensus        84 g~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~  162 (245)
T 3e9n_A           84 AVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAAS-GCVIYINSGAGNGPHPGNTIYAASKHALRGLADAFRK  162 (245)
T ss_dssp             ----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEC----------CHHHHHHHHHHHHHHHHHHH
T ss_pred             CcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEcCcccccCCCCchHHHHHHHHHHHHHHHHHH
Confidence            97532          13557899999888877764    334 6899999954333344567899999999987753   


Q ss_pred             ---hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcCCCCC
Q 023205          193 ---RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDPVFP  269 (286)
Q Consensus       193 ---~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~~~~  269 (286)
                         ..|+++++++||.+.++......           .   ..   ...++     ...+++++|+|++++.++..+.. 
T Consensus       163 e~~~~gi~v~~v~PG~v~t~~~~~~~-----------~---~~---~~~~~-----~~~~~~p~dvA~~i~~l~~~~~~-  219 (245)
T 3e9n_A          163 EEANNGIRVSTVSPGPTNTPMLQGLM-----------D---SQ---GTNFR-----PEIYIEPKEIANAIRFVIDAGET-  219 (245)
T ss_dssp             HHGGGTCEEEEEEECCC---------------------------------C-----CGGGSCHHHHHHHHHHHHTSCTT-
T ss_pred             HhhhcCeEEEEEecCCccCchhhhhh-----------h---hh---hcccc-----cccCCCHHHHHHHHHHHHcCCCc-
Confidence               46899999999999876432110           0   00   00011     13468999999999999987764 


Q ss_pred             CCeeEec
Q 023205          270 PGIVDVH  276 (286)
Q Consensus       270 ~~~~~l~  276 (286)
                      +.++++.
T Consensus       220 ~~~~~i~  226 (245)
T 3e9n_A          220 TQITNVD  226 (245)
T ss_dssp             EEEEEEE
T ss_pred             cceeeeE
Confidence            6666653

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=99.86  E-value=3.6e-20  Score=156.08  Aligned_cols=194  Identities=13%  Similarity=0.091  Sum_probs=141.0

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc------------cccCCceeEEeccCCCHhHHHHHhc--
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------------DSWANNVIWHQGNLLSSDSWKEALD--  120 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~------------~~~~~~~~~i~~Dl~d~~~~~~~~~--  120 (286)
                      ..|+++||||+|+||++++++|+++|++|++++|+.++...            .....++.++.+|++|+++++++++  
T Consensus         5 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   84 (274)
T 3e03_A            5 SGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAVAAT   84 (274)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHH
Confidence            35799999999999999999999999999999998754211            0113578899999999998887765  


Q ss_pred             -----CCCEEEEccccCCC----------cchhhhhhhHHHHHHHHHHHH----cCCCEEEEEecCCcCCC--Cccccch
Q 023205          121 -----GVTAVISCVGGFGS----------NSYMYKINGTANINAIRAASE----KGVKRFVYISAADFGVA--NYLLQGY  179 (286)
Q Consensus       121 -----~~d~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~~----~~v~~~v~~Ss~~~~~~--~~~~~~y  179 (286)
                           .+|++|||||....          ....+++|+.++.++.+++..    .+..+||++||......  ......|
T Consensus        85 ~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~~Y  164 (274)
T 3e03_A           85 VDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAWWGAHTGY  164 (274)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCCCCCHHHHHHCHHH
T ss_pred             HHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECChHhcCCCCCCCCchH
Confidence                 68999999996521          134668999999999888754    44569999999532222  2345679


Q ss_pred             HHHHHHHHHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHH
Q 023205          180 YEGKRAAETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVT  253 (286)
Q Consensus       180 ~~sK~~~E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~  253 (286)
                      +.+|...+.+.+.      ..|+++++++||.+......                  ...   ..     .....+.+.+
T Consensus       165 ~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v~T~~~------------------~~~---~~-----~~~~~~~~pe  218 (274)
T 3e03_A          165 TLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATDAI------------------NML---PG-----VDAAACRRPE  218 (274)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC----------------------------C-----CCGGGSBCTH
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcccccchh------------------hhc---cc-----ccccccCCHH
Confidence            9999999987653      46899999999954432210                  000   00     1112367899


Q ss_pred             HHHHHHHHHhcCCC--CCCCeeE
Q 023205          254 VVAKVAVRAATDPV--FPPGIVD  274 (286)
Q Consensus       254 Dva~~~~~~l~~~~--~~~~~~~  274 (286)
                      |+|++++.++..+.  ..|+.+.
T Consensus       219 dvA~~v~~l~s~~~~~itG~~i~  241 (274)
T 3e03_A          219 IMADAAHAVLTREAAGFHGQFLI  241 (274)
T ss_dssp             HHHHHHHHHHTSCCTTCCSCEEE
T ss_pred             HHHHHHHHHhCccccccCCeEEE
Confidence            99999999997643  3567663

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=99.86  E-value=6.6e-20  Score=153.80  Aligned_cols=209  Identities=14%  Similarity=0.097  Sum_probs=151.7

Q ss_pred             CCCeEEEEcCC--ChhHHHHHHHHHHCCCeEEEEecCCCcccc-------cccCCceeEEeccCCCHhHHHHHhc-----
Q 023205           55 PSEKLLVLGGN--GFVGSHICREALDRGLTVASLSRSGRSSLR-------DSWANNVIWHQGNLLSSDSWKEALD-----  120 (286)
Q Consensus        55 ~~~~VlVtGat--G~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~-----  120 (286)
                      ..++|+||||+  |+||.+++++|+++|++|+++.|+..+...       .....++.++.+|++|.++++++++     
T Consensus        19 ~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   98 (267)
T 3gdg_A           19 KGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDVVAD   98 (267)
T ss_dssp             TTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHHHHHH
Confidence            35799999999  899999999999999999999998755311       1124578999999999998887775     


Q ss_pred             --CCCEEEEccccCCC----------cchhhhhhhHHHHHHHHHH----HHcCCCEEEEEecCC--cCCCCccccchHHH
Q 023205          121 --GVTAVISCVGGFGS----------NSYMYKINGTANINAIRAA----SEKGVKRFVYISAAD--FGVANYLLQGYYEG  182 (286)
Q Consensus       121 --~~d~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a----~~~~v~~~v~~Ss~~--~~~~~~~~~~y~~s  182 (286)
                        .+|++|||||....          ....+++|+.++.++++++    ++.+..+||++||..  ++........|+.+
T Consensus        99 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~Y~~s  178 (267)
T 3gdg_A           99 FGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIANFPQEQTSYNVA  178 (267)
T ss_dssp             TSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCSSSCCHHHHHH
T ss_pred             cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCCceEEEEccccccccCCCCCCCcchHH
Confidence              56999999996532          1346789999999998887    445667999999953  22222356789999


Q ss_pred             HHHHHHHHHH-----hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHH
Q 023205          183 KRAAETELLT-----RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAK  257 (286)
Q Consensus       183 K~~~E~~~~~-----~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~  257 (286)
                      |...+.+.+.     ...++++.+.||.+..+.....   +    ....+.+..      ..|     ...+.+++|+|+
T Consensus       179 K~a~~~~~~~la~e~~~~i~v~~v~PG~v~t~~~~~~---~----~~~~~~~~~------~~~-----~~r~~~~~dva~  240 (267)
T 3gdg_A          179 KAGCIHMARSLANEWRDFARVNSISPGYIDTGLSDFV---P----KETQQLWHS------MIP-----MGRDGLAKELKG  240 (267)
T ss_dssp             HHHHHHHHHHHHHHTTTTCEEEEEEECCEECSCGGGS---C----HHHHHHHHT------TST-----TSSCEETHHHHH
T ss_pred             HHHHHHHHHHHHHHhccCcEEEEEECCccccchhhhC---C----HHHHHHHHh------cCC-----CCCCcCHHHHHh
Confidence            9999987753     1238999999999976543211   0    111111111      112     234678999999


Q ss_pred             HHHHHhcCC--CCCCCeeEecccccc
Q 023205          258 VAVRAATDP--VFPPGIVDVHGILRY  281 (286)
Q Consensus       258 ~~~~~l~~~--~~~~~~~~l~~~~~~  281 (286)
                      +++.++...  ...|+++++.|+..+
T Consensus       241 ~~~~l~s~~~~~itG~~i~vdgG~~~  266 (267)
T 3gdg_A          241 AYVYFASDASTYTTGADLLIDGGYTT  266 (267)
T ss_dssp             HHHHHHSTTCTTCCSCEEEESTTGGG
T ss_pred             HhheeecCccccccCCEEEECCceec
Confidence            999999753  356899999987643

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=99.86  E-value=1.5e-20  Score=159.74  Aligned_cols=210  Identities=18%  Similarity=0.128  Sum_probs=151.4

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEe-cCCCcccc---c---ccCCceeEEeccCCCHh--------------
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLS-RSGRSSLR---D---SWANNVIWHQGNLLSSD--------------  113 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~-R~~~~~~~---~---~~~~~~~~i~~Dl~d~~--------------  113 (286)
                      ..++++||||+|+||+++++.|+++|++|++++ |+.++...   +   ....++.++.+|++|.+              
T Consensus         8 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   87 (291)
T 1e7w_A            8 TVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVT   87 (291)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCCcccccccccccccccc
Confidence            357899999999999999999999999999999 87543111   1   12357899999999988              


Q ss_pred             ---HHHHHhc-------CCCEEEEccccCCC------c------------------chhhhhhhHHHHHHHHHHHH----
Q 023205          114 ---SWKEALD-------GVTAVISCVGGFGS------N------------------SYMYKINGTANINAIRAASE----  155 (286)
Q Consensus       114 ---~~~~~~~-------~~d~vi~~a~~~~~------~------------------~~~~~~~~~~~~~l~~~a~~----  155 (286)
                         ++.++++       .+|++|||||....      .                  ...+++|+.++.++++++..    
T Consensus        88 ~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~  167 (291)
T 1e7w_A           88 LFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAG  167 (291)
T ss_dssp             HHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHT
T ss_pred             hHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHHHHHHHh
Confidence               8887765       68999999986421      1                  24568899999988888753    


Q ss_pred             cC------CCEEEEEecCCcCCCCccccchHHHHHHHHHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccC
Q 023205          156 KG------VKRFVYISAADFGVANYLLQGYYEGKRAAETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIG  223 (286)
Q Consensus       156 ~~------v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~  223 (286)
                      .+      ..+||++||............|+.+|...+.+.+.      ..|+++++|+||.+..+. .  .  +    .
T Consensus       168 ~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~-~--~--~----~  238 (291)
T 1e7w_A          168 TPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-D--M--P----P  238 (291)
T ss_dssp             SCGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGG-G--S--C----H
T ss_pred             cCCCCCCCCcEEEEEechhhcCCCCCCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCccCCc-c--C--C----H
Confidence            34      46899999964333334567899999999987653      468999999999986543 1  1  0    0


Q ss_pred             chHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcCC--CCCCCeeEecccccccc
Q 023205          224 SPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDP--VFPPGIVDVHGILRYSQ  283 (286)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~--~~~~~~~~l~~~~~~s~  283 (286)
                         +......   ...|..    ..+.+.+|+|++++.++..+  ...|+.+++.|+..+++
T Consensus       239 ---~~~~~~~---~~~p~~----~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~~~~  290 (291)
T 1e7w_A          239 ---AVWEGHR---SKVPLY----QRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSLTR  290 (291)
T ss_dssp             ---HHHHHHH---TTCTTT----TSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCC
T ss_pred             ---HHHHHHH---hhCCCC----CCCCCHHHHHHHHHHHhCCcccCccCcEEEECCCccccc
Confidence               1111111   112221    03678999999999999753  34688999999876653

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=99.85  E-value=1.5e-19  Score=156.95  Aligned_cols=198  Identities=13%  Similarity=0.117  Sum_probs=144.4

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc------------cccCCceeEEeccCCCHhHHHHHhc--
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------------DSWANNVIWHQGNLLSSDSWKEALD--  120 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~------------~~~~~~~~~i~~Dl~d~~~~~~~~~--  120 (286)
                      ..++||||||+|+||.+++++|+++|++|+++.|+.++...            .....++.++.+|++|+++++++++  
T Consensus        44 ~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~  123 (346)
T 3kvo_A           44 AGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAVEKA  123 (346)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHH
Confidence            46799999999999999999999999999999998764211            1123578899999999998888775  


Q ss_pred             -----CCCEEEEccccCCC----------cchhhhhhhHHHHHHHHHHH----HcCCCEEEEEecCCcCCC--Cccccch
Q 023205          121 -----GVTAVISCVGGFGS----------NSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVA--NYLLQGY  179 (286)
Q Consensus       121 -----~~d~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~----~~~v~~~v~~Ss~~~~~~--~~~~~~y  179 (286)
                           ++|+||||||....          ....+++|+.++.++++++.    +.+..+||++||...-..  ......|
T Consensus       124 ~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~~~~~~~~~~~~~Y  203 (346)
T 3kvo_A          124 IKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPVWFKQHCAY  203 (346)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCCCCCGGGTSSSHHH
T ss_pred             HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHHHcCCCCCCCchHH
Confidence                 78999999996531          13567899999999999884    345579999999532211  3446789


Q ss_pred             HHHHHHHHHHHHH-----hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHH
Q 023205          180 YEGKRAAETELLT-----RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTV  254 (286)
Q Consensus       180 ~~sK~~~E~~~~~-----~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D  254 (286)
                      +.+|...+.+.+.     ..|+++++|.||.+....              .    ......  ..     ....+..++|
T Consensus       204 ~aSKaal~~l~~~la~e~~~gIrvn~v~PG~~i~T~--------------~----~~~~~~--~~-----~~~r~~~ped  258 (346)
T 3kvo_A          204 TIAKYGMSMYVLGMAEEFKGEIAVNALWPKTAIHTA--------------A----MDMLGG--PG-----IESQCRKVDI  258 (346)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTTCEEEEEECSBCBCCH--------------H----HHHHCC---------CGGGCBCTHH
T ss_pred             HHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCccccH--------------H----HHhhcc--cc-----ccccCCCHHH
Confidence            9999999987653     258999999999644321              1    111110  00     1223578999


Q ss_pred             HHHHHHHHhcCCC-CCCCeeEeccc
Q 023205          255 VAKVAVRAATDPV-FPPGIVDVHGI  278 (286)
Q Consensus       255 va~~~~~~l~~~~-~~~~~~~l~~~  278 (286)
                      +|++++.++.... ..|+.+ +.+.
T Consensus       259 vA~~v~~L~s~~~~itG~~i-vdgg  282 (346)
T 3kvo_A          259 IADAAYSIFQKPKSFTGNFV-IDEN  282 (346)
T ss_dssp             HHHHHHHHHTSCTTCCSCEE-EHHH
T ss_pred             HHHHHHHHHhcCCCCCceEE-ECCc
Confidence            9999999998733 346655 6554

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=99.85  E-value=6.6e-21  Score=161.56  Aligned_cols=186  Identities=15%  Similarity=0.102  Sum_probs=136.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc------cccCCceeEEeccCCCHhHHHHHhc-------CC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD-------GV  122 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~------~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~  122 (286)
                      .++|+||||+|+||++++++|+++|++|++++|+.++...      .....++.++.+|++|.++++++++       ++
T Consensus        28 ~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~i  107 (286)
T 1xu9_A           28 GKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGGL  107 (286)
T ss_dssp             TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHTSC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence            5789999999999999999999999999999998654211      1112368899999999988887765       78


Q ss_pred             CEEEEc-cccCCC---------cchhhhhhhHHHHHHHHHHHHc---CCCEEEEEecCCcCCCCccccchHHHHHHHHHH
Q 023205          123 TAVISC-VGGFGS---------NSYMYKINGTANINAIRAASEK---GVKRFVYISAADFGVANYLLQGYYEGKRAAETE  189 (286)
Q Consensus       123 d~vi~~-a~~~~~---------~~~~~~~~~~~~~~l~~~a~~~---~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~  189 (286)
                      |+|||| ++....         ....+++|+.++.++++++...   +..+||++||........+...|+.+|...|.+
T Consensus       108 D~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~  187 (286)
T 1xu9_A          108 DMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGF  187 (286)
T ss_dssp             SEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSCCTTCHHHHHHHHHHHHH
T ss_pred             CEEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHCCCEEEEECCcccccCCCCccHHHHHHHHHHHH
Confidence            999999 554321         1345789999999988877542   236999999953323334567899999999886


Q ss_pred             HHH--------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHH
Q 023205          190 LLT--------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVR  261 (286)
Q Consensus       190 ~~~--------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~  261 (286)
                      ...        ..++++++++||.+..+..                  .....        +.....+++++|+|+.++.
T Consensus       188 ~~~l~~e~~~~~~~i~v~~v~Pg~v~t~~~------------------~~~~~--------~~~~~~~~~~~~vA~~i~~  241 (286)
T 1xu9_A          188 FSSIRKEYSVSRVNVSITLCVLGLIDTETA------------------MKAVS--------GIVHMQAAPKEECALEIIK  241 (286)
T ss_dssp             HHHHHHHHHHHTCCCEEEEEEECCBCCHHH------------------HHHSC--------GGGGGGCBCHHHHHHHHHH
T ss_pred             HHHHHHHHhhcCCCeEEEEeecCccCChhH------------------HHhcc--------ccccCCCCCHHHHHHHHHH
Confidence            642        3589999999999864321                  00000        0112346899999999999


Q ss_pred             HhcCCC
Q 023205          262 AATDPV  267 (286)
Q Consensus       262 ~l~~~~  267 (286)
                      ++..+.
T Consensus       242 ~~~~~~  247 (286)
T 1xu9_A          242 GGALRQ  247 (286)
T ss_dssp             HHHTTC
T ss_pred             HHhcCC
Confidence            997654

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=99.85  E-value=6.8e-21  Score=157.96  Aligned_cols=195  Identities=14%  Similarity=0.054  Sum_probs=141.7

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc------cccCCceeEEeccC--CCHhHHHHHhc------
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNL--LSSDSWKEALD------  120 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~------~~~~~~~~~i~~Dl--~d~~~~~~~~~------  120 (286)
                      ..++++||||+|+||++++++|+++|++|++++|+.++...      .....+..++.+|+  +|.+++.++++      
T Consensus        13 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~~~~   92 (247)
T 3i1j_A           13 KGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVEHEF   92 (247)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHHHhC
Confidence            46799999999999999999999999999999998654211      11225677888888  88888777664      


Q ss_pred             -CCCEEEEccccCCC-----------cchhhhhhhHHHHHHHHHHH----HcCCCEEEEEecCCcCCCCccccchHHHHH
Q 023205          121 -GVTAVISCVGGFGS-----------NSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEGKR  184 (286)
Q Consensus       121 -~~d~vi~~a~~~~~-----------~~~~~~~~~~~~~~l~~~a~----~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~  184 (286)
                       ++|++|||||....           ....+++|+.++.++++++.    +.+..+||++||............|+.+|.
T Consensus        93 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~  172 (247)
T 3i1j_A           93 GRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGRKGRANWGAYGVSKF  172 (247)
T ss_dssp             SCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             CCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEEEEcchhhcCCCCCcchhHHHHH
Confidence             68999999996421           13467899999999998884    445569999999643334445678999999


Q ss_pred             HHHHHHHH------h-CCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHH
Q 023205          185 AAETELLT------R-YPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAK  257 (286)
Q Consensus       185 ~~E~~~~~------~-~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~  257 (286)
                      ..+.+.+.      . .++++++++||.+..+..                  ......        .....+...+|+|+
T Consensus       173 a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~~~------------------~~~~~~--------~~~~~~~~p~dva~  226 (247)
T 3i1j_A          173 ATEGLMQTLADELEGVTAVRANSINPGATRTGMR------------------AQAYPD--------ENPLNNPAPEDIMP  226 (247)
T ss_dssp             HHHHHHHHHHHHHTTTSSEEEEEEECCCCSSHHH------------------HHHSTT--------SCGGGSCCGGGGTH
T ss_pred             HHHHHHHHHHHHhcCCCCeEEEEEecCcccCccc------------------hhcccc--------cCccCCCCHHHHHH
Confidence            99987652      2 689999999998854311                  111100        11123567899999


Q ss_pred             HHHHHhcCC--CCCCCeeEe
Q 023205          258 VAVRAATDP--VFPPGIVDV  275 (286)
Q Consensus       258 ~~~~~l~~~--~~~~~~~~l  275 (286)
                      +++.++...  ...|+.+++
T Consensus       227 ~~~~l~s~~~~~itG~~i~~  246 (247)
T 3i1j_A          227 VYLYLMGPDSTGINGQALNA  246 (247)
T ss_dssp             HHHHHHSGGGTTCCSCEEEC
T ss_pred             HHHHHhCchhccccCeeecC
Confidence            999999643  345666654

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=99.84  E-value=4e-20  Score=159.60  Aligned_cols=155  Identities=13%  Similarity=0.030  Sum_probs=120.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc--c---------ccCCceeEEeccCCCHhHHHHHhcC---
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--D---------SWANNVIWHQGNLLSSDSWKEALDG---  121 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~--~---------~~~~~~~~i~~Dl~d~~~~~~~~~~---  121 (286)
                      .++|+||||+|+||++++++|+++|++|+++.|+..+...  .         ....++.++.+|++|.++++++++.   
T Consensus         2 ~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~   81 (327)
T 1jtv_A            2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE   81 (327)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHhc
Confidence            4689999999999999999999999999988886543211  0         0125789999999999999998875   


Q ss_pred             --CCEEEEccccCCC----------cchhhhhhhHHHHHHHHHH----HHcCCCEEEEEecCCcCCCCccccchHHHHHH
Q 023205          122 --VTAVISCVGGFGS----------NSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKRA  185 (286)
Q Consensus       122 --~d~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a----~~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~  185 (286)
                        +|+||||||....          ....+++|+.++.++++++    ++.+..+||++||............|+.+|..
T Consensus        82 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~IV~isS~~~~~~~~~~~~Y~aSK~a  161 (327)
T 1jtv_A           82 GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFA  161 (327)
T ss_dssp             SCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCTTCHHHHHHHHH
T ss_pred             CCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCcccccCCCCChHHHHHHHH
Confidence              8999999986421          1356789999999998886    44567799999995322223345689999999


Q ss_pred             HHHHHHH------hCCCcEEEEeeCeeecCC
Q 023205          186 AETELLT------RYPYGGVILRPGFIYGTR  210 (286)
Q Consensus       186 ~E~~~~~------~~g~~~~ilRp~~v~g~~  210 (286)
                      .|.+.+.      ..|+++++|+||.+..+.
T Consensus       162 ~~~~~~~la~el~~~gI~v~~v~PG~v~T~~  192 (327)
T 1jtv_A          162 LEGLCESLAVLLLPFGVHLSLIECGPVHTAF  192 (327)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECCBCC--
T ss_pred             HHHHHHHHHHHhhhcCcEEEEEEeCcccChH
Confidence            9987753      468999999999997654

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=99.84  E-value=6.5e-20  Score=153.16  Aligned_cols=215  Identities=13%  Similarity=0.034  Sum_probs=150.3

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc--cccCCceeEEeccCCCHhHHHHHhc-------CCCE
Q 023205           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSWANNVIWHQGNLLSSDSWKEALD-------GVTA  124 (286)
Q Consensus        54 ~~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~--~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d~  124 (286)
                      ...|+++||||++.||+.+++.|+++|++|++.+|+.+....  +....++..+++|++|+++++++++       .+|+
T Consensus        27 L~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDi  106 (273)
T 4fgs_A           27 LNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGGAVGIQADSANLAELDRLYEKVKAEAGRIDV  106 (273)
T ss_dssp             TTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCEEE
T ss_pred             hCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            346899999999999999999999999999999998654221  2234578899999999998887764       5799


Q ss_pred             EEEccccCC----------CcchhhhhhhHHHHHHHHHHHHcC--CCEEEEEecCCcCCCCccccchHHHHHHHHHHHHH
Q 023205          125 VISCVGGFG----------SNSYMYKINGTANINAIRAASEKG--VKRFVYISAADFGVANYLLQGYYEGKRAAETELLT  192 (286)
Q Consensus       125 vi~~a~~~~----------~~~~~~~~~~~~~~~l~~~a~~~~--v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~~  192 (286)
                      +|+|||...          .+...+++|+.++..+.+++...-  -.++|++||...-...+....|+.+|...+.+.+.
T Consensus       107 LVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~~~~~~~~~~~~Y~asKaav~~ltr~  186 (273)
T 4fgs_A          107 LFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAGSTGTPAFSVYAASKAALRSFARN  186 (273)
T ss_dssp             EEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGGSCCTTCHHHHHHHHHHHHHHHH
T ss_pred             EEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeehhhccCCCCchHHHHHHHHHHHHHHH
Confidence            999998642          124677899999999998886532  23799999954333334456899999999986653


Q ss_pred             ------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcCC
Q 023205          193 ------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDP  266 (286)
Q Consensus       193 ------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~  266 (286)
                            ..|++++.|.||.+..+.........    ....+.+.....  ..+|+     ..+..++|+|++++.++.+.
T Consensus       187 lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~----~~~~~~~~~~~~--~~~Pl-----gR~g~peeiA~~v~FLaSd~  255 (273)
T 4fgs_A          187 WILDLKDRGIRINTLSPGPTETTGLVELAGKD----PVQQQGLLNALA--AQVPM-----GRVGRAEEVAAAALFLASDD  255 (273)
T ss_dssp             HHHHTTTSCEEEEEEEECSBCC---------C----HHHHHHHHHHHH--HHSTT-----SSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHhcccCeEEEEEeeCCCCChhHHHhhccC----chhhHHHHHHHH--hcCCC-----CCCcCHHHHHHHHHHHhCch
Confidence                  57899999999998655322110000    000011111111  12333     23568899999999999653


Q ss_pred             --CCCCCeeEecccc
Q 023205          267 --VFPPGIVDVHGIL  279 (286)
Q Consensus       267 --~~~~~~~~l~~~~  279 (286)
                        ...|+++.+.|+.
T Consensus       256 a~~iTG~~i~VDGG~  270 (273)
T 4fgs_A          256 SSFVTGAELFVDGGS  270 (273)
T ss_dssp             GTTCCSCEEEESTTT
T ss_pred             hcCccCCeEeECcCh
Confidence              3468999998864

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=99.84  E-value=6.1e-20  Score=151.97  Aligned_cols=209  Identities=13%  Similarity=0.031  Sum_probs=150.4

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc-----cccCCceeEEeccCCCHhHHHHHhc-------C
Q 023205           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------G  121 (286)
Q Consensus        54 ~~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~-----~~~~~~~~~i~~Dl~d~~~~~~~~~-------~  121 (286)
                      ...|+++||||++.||+.+++.|+++|++|++.+|+.++...     .....++..+++|++|+++++++++       .
T Consensus         7 L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~   86 (255)
T 4g81_D            7 LTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEGIH   86 (255)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTTCC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHCCC
Confidence            357899999999999999999999999999999998654211     1123578899999999998887764       5


Q ss_pred             CCEEEEccccCC----------CcchhhhhhhHHHHHHHHHHHH-----cCCCEEEEEecCCcCCCCccccchHHHHHHH
Q 023205          122 VTAVISCVGGFG----------SNSYMYKINGTANINAIRAASE-----KGVKRFVYISAADFGVANYLLQGYYEGKRAA  186 (286)
Q Consensus       122 ~d~vi~~a~~~~----------~~~~~~~~~~~~~~~l~~~a~~-----~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~  186 (286)
                      +|++|||||...          .+...+++|+.++..+.+++..     .+-.+||++||...-...+....|+.+|...
T Consensus        87 iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~~~~~~~~Y~asKaal  166 (255)
T 4g81_D           87 VDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAARPTVAPYTAAKGGI  166 (255)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSBCTTCHHHHHHHHHH
T ss_pred             CcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcCCCCCchhHHHHHHHH
Confidence            799999998653          1245678999999888776632     2345899999964333334456799999999


Q ss_pred             HHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHH
Q 023205          187 ETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAV  260 (286)
Q Consensus       187 E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~  260 (286)
                      +.+.+.      ..|++++.|.||.+..+........     ....+.+..      .+|+     ..+...+|+|++++
T Consensus       167 ~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~-----~~~~~~~~~------~~Pl-----~R~g~pediA~~v~  230 (255)
T 4g81_D          167 KMLTCSMAAEWAQFNIQTNAIGPGYILTDMNTALIED-----KQFDSWVKS------STPS-----QRWGRPEELIGTAI  230 (255)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECSBCCGGGHHHHTC-----HHHHHHHHH------HSTT-----CSCBCGGGGHHHHH
T ss_pred             HHHHHHHHHHhcccCeEEEEEeeCCCCCchhhcccCC-----HHHHHHHHh------CCCC-----CCCcCHHHHHHHHH
Confidence            986652      5799999999999975532110000     011111111      2232     23568899999999


Q ss_pred             HHhcCC--CCCCCeeEeccc
Q 023205          261 RAATDP--VFPPGIVDVHGI  278 (286)
Q Consensus       261 ~~l~~~--~~~~~~~~l~~~  278 (286)
                      .++...  ...|+++.+.|+
T Consensus       231 fL~S~~a~~iTG~~i~VDGG  250 (255)
T 4g81_D          231 FLSSKASDYINGQIIYVDGG  250 (255)
T ss_dssp             HHHSGGGTTCCSCEEEESTT
T ss_pred             HHhCchhCCCcCCEEEECCC
Confidence            998643  356899999886

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=99.84  E-value=4.2e-20  Score=154.45  Aligned_cols=207  Identities=14%  Similarity=0.061  Sum_probs=137.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc---c--ccCCceeEEeccCCCHhHHHHHhc--------CC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR---D--SWANNVIWHQGNLLSSDSWKEALD--------GV  122 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~---~--~~~~~~~~i~~Dl~d~~~~~~~~~--------~~  122 (286)
                      .++++||||+|+||++++++|+++|++|++++|+.++...   +  ....++.++.+|++|+++++++++        .+
T Consensus         5 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~i   84 (260)
T 2qq5_A            5 GQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQGRL   84 (260)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHTTCC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCc
Confidence            5789999999999999999999999999999998643211   0  113468899999999988776653        46


Q ss_pred             CEEEEccc--cC-------C--------CcchhhhhhhHHHHHHHHHHH----HcCCCEEEEEecCCcCCCCccccchHH
Q 023205          123 TAVISCVG--GF-------G--------SNSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYE  181 (286)
Q Consensus       123 d~vi~~a~--~~-------~--------~~~~~~~~~~~~~~~l~~~a~----~~~v~~~v~~Ss~~~~~~~~~~~~y~~  181 (286)
                      |++|||||  ..       .        .....+++|+.++.++.+++.    +.+..+||++||.... ...+...|+.
T Consensus        85 d~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~-~~~~~~~Y~a  163 (260)
T 2qq5_A           85 DVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSL-QYMFNVPYGV  163 (260)
T ss_dssp             CEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGTCCEEEEECCGGGT-SCCSSHHHHH
T ss_pred             eEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcCCcEEEEEcChhhc-CCCCCCchHH
Confidence            99999994  21       1        012456788888877766654    4556799999995321 1234568999


Q ss_pred             HHHHHHHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHH
Q 023205          182 GKRAAETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVV  255 (286)
Q Consensus       182 sK~~~E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dv  255 (286)
                      +|...+.+.+.      ..|+++++++||.+..+........     ... . ........ ..+.     ..+...+|+
T Consensus       164 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~-----~~~-~-~~~~~~~~-~~~~-----~~~~~pe~v  230 (260)
T 2qq5_A          164 GKAACDKLAADCAHELRRHGVSCVSLWPGIVQTELLKEHMAK-----EEV-L-QDPVLKQF-KSAF-----SSAETTELS  230 (260)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTTC-----------------------------------CHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhccCCeEEEEEecCccccHHHHHhhcc-----ccc-c-chhHHHHH-Hhhh-----ccCCCHHHH
Confidence            99999987653      4689999999999976643211000     000 0 00000000 0011     123688999


Q ss_pred             HHHHHHHhcCCC---CCCCeeEec
Q 023205          256 AKVAVRAATDPV---FPPGIVDVH  276 (286)
Q Consensus       256 a~~~~~~l~~~~---~~~~~~~l~  276 (286)
                      |++++.++..+.   ..|+.+...
T Consensus       231 a~~v~~l~s~~~~~~itG~~i~~~  254 (260)
T 2qq5_A          231 GKCVVALATDPNILSLSGKVLPSC  254 (260)
T ss_dssp             HHHHHHHHTCTTGGGGTTCEEEHH
T ss_pred             HHHHHHHhcCcccccccceeechh
Confidence            999999997754   256666654

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=99.83  E-value=1.4e-19  Score=154.79  Aligned_cols=180  Identities=18%  Similarity=0.154  Sum_probs=133.8

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc------cccCCceeEEeccCCCH-hHHHHHhc-------
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSS-DSWKEALD-------  120 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~------~~~~~~~~~i~~Dl~d~-~~~~~~~~-------  120 (286)
                      .+++||||||+|+||++++++|+++|++|++++|+..+...      .....++.++.+|++|. +.+..+++       
T Consensus        11 ~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~~g   90 (311)
T 3o26_A           11 KRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTHFG   90 (311)
T ss_dssp             -CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHHHS
T ss_pred             CCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHhCC
Confidence            46789999999999999999999999999999998654211      12235799999999997 77666654       


Q ss_pred             CCCEEEEccccCCC----------------------------------------cchhhhhhhHHHHHHHHHHHH----c
Q 023205          121 GVTAVISCVGGFGS----------------------------------------NSYMYKINGTANINAIRAASE----K  156 (286)
Q Consensus       121 ~~d~vi~~a~~~~~----------------------------------------~~~~~~~~~~~~~~l~~~a~~----~  156 (286)
                      ++|+||||||....                                        ....+++|+.++.++++++..    .
T Consensus        91 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~  170 (311)
T 3o26_A           91 KLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQLS  170 (311)
T ss_dssp             SCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTS
T ss_pred             CCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHHhhHhhccC
Confidence            78999999997531                                        123478999999988887753    4


Q ss_pred             CCCEEEEEecCCc--CCC-----------------------------------------CccccchHHHHHHHHHHHHH-
Q 023205          157 GVKRFVYISAADF--GVA-----------------------------------------NYLLQGYYEGKRAAETELLT-  192 (286)
Q Consensus       157 ~v~~~v~~Ss~~~--~~~-----------------------------------------~~~~~~y~~sK~~~E~~~~~-  192 (286)
                      +..+||++||...  +..                                         ......|+.+|...+.+.+. 
T Consensus       171 ~~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~l  250 (311)
T 3o26_A          171 DSPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNAYTRVL  250 (311)
T ss_dssp             SSCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCSSCHHHHHHHHHHHHHHHHH
T ss_pred             CCCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCcccchhhHHHHHHHHHHHHHH
Confidence            5569999999521  110                                         01235799999999987753 


Q ss_pred             ---hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcCCC
Q 023205          193 ---RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDPV  267 (286)
Q Consensus       193 ---~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~~  267 (286)
                         ..+++++++.||++..+...                                 .....+.++.|+.++.++..+.
T Consensus       251 a~e~~~i~v~~v~PG~v~T~~~~---------------------------------~~~~~~~~~~a~~~~~~~~~~~  295 (311)
T 3o26_A          251 ANKIPKFQVNCVCPGLVKTEMNY---------------------------------GIGNYTAEEGAEHVVRIALFPD  295 (311)
T ss_dssp             HHHCTTSEEEEECCCSBCSGGGT---------------------------------TCCSBCHHHHHHHHHHHHTCCS
T ss_pred             HhhcCCceEEEecCCceecCCcC---------------------------------CCCCCCHHHHHHHHHHHHhCCC
Confidence               34699999999999654211                                 0123578999999999887654

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=99.83  E-value=2.8e-19  Score=148.54  Aligned_cols=214  Identities=12%  Similarity=0.020  Sum_probs=150.1

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc----cccCCceeEEeccCCCHhHHHHHhc-------CCC
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR----DSWANNVIWHQGNLLSSDSWKEALD-------GVT  123 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~----~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d  123 (286)
                      ..|+++||||++.||+.+++.|+++|.+|++.+|+.++...    .....++.++.+|++|+++++++++       .+|
T Consensus         6 ~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~G~iD   85 (258)
T 4gkb_A            6 QDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAFLDALAQRQPRATYLPVELQDDAQCRDAVAQTIATFGRLD   85 (258)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHHHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence            46899999999999999999999999999999998765211    1224578999999999988877664       589


Q ss_pred             EEEEccccCCC---------cchhhhhhhHHHHHHHHHHHH----cCCCEEEEEecCCcCCCCccccchHHHHHHHHHHH
Q 023205          124 AVISCVGGFGS---------NSYMYKINGTANINAIRAASE----KGVKRFVYISAADFGVANYLLQGYYEGKRAAETEL  190 (286)
Q Consensus       124 ~vi~~a~~~~~---------~~~~~~~~~~~~~~l~~~a~~----~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~  190 (286)
                      ++|||||....         +...+++|+.++..+.+++..    .+ .+||++||...-........|+.+|...+.+.
T Consensus        86 iLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-G~IVnisS~~~~~~~~~~~~Y~asKaav~~lt  164 (258)
T 4gkb_A           86 GLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATR-GAIVNISSKTAVTGQGNTSGYCASKGAQLALT  164 (258)
T ss_dssp             EEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTHHHHCCSSCHHHHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CeEEEEeehhhccCCCCchHHHHHHHHHHHHH
Confidence            99999986421         235668999999888777643    33 58999999632223334567999999999866


Q ss_pred             HH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhc
Q 023205          191 LT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAAT  264 (286)
Q Consensus       191 ~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~  264 (286)
                      +.      ..|++++.|.||.+..+......... .....   ......   ..+|+.    ..+...+|+|++++.++.
T Consensus       165 r~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~-~~~~~---~~~~~~---~~~plg----~R~g~peeiA~~v~fLaS  233 (258)
T 4gkb_A          165 REWAVALREHGVRVNAVIPAEVMTPLYRNWIATF-EDPEA---KLAEIA---AKVPLG----RRFTTPDEIADTAVFLLS  233 (258)
T ss_dssp             HHHHHHHGGGTCEEEEEEECSBCCSCC------------C---HHHHHH---TTCTTT----TSCBCHHHHHHHHHHHHS
T ss_pred             HHHHHHhcccCeEEEEEecCCCCChhHhhhhhcc-cChHH---HHHHHH---hcCCCC----CCCcCHHHHHHHHHHHhC
Confidence            52      67999999999999765432111000 00001   111111   122321    245788999999999986


Q ss_pred             CCC--CCCCeeEeccccc
Q 023205          265 DPV--FPPGIVDVHGILR  280 (286)
Q Consensus       265 ~~~--~~~~~~~l~~~~~  280 (286)
                      ...  ..|+++.+.|+..
T Consensus       234 ~~a~~iTG~~i~VDGG~T  251 (258)
T 4gkb_A          234 PRASHTTGEWLFVDGGYT  251 (258)
T ss_dssp             GGGTTCCSCEEEESTTTT
T ss_pred             chhcCccCCeEEECCCcc
Confidence            533  5789999988753

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=99.83  E-value=1.6e-19  Score=150.38  Aligned_cols=216  Identities=18%  Similarity=0.163  Sum_probs=146.5

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhc-------CCCEEE
Q 023205           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD-------GVTAVI  126 (286)
Q Consensus        54 ~~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d~vi  126 (286)
                      ...|+++||||++.||+++++.|+++|++|++..|+..+..     ....++++|++|+++++++++       ++|++|
T Consensus         9 L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~-----~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDilV   83 (261)
T 4h15_A            9 LRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPEGL-----PEELFVEADLTTKEGCAIVAEATRQRLGGVDVIV   83 (261)
T ss_dssp             CTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTTS-----CTTTEEECCTTSHHHHHHHHHHHHHHTSSCSEEE
T ss_pred             CCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhCC-----CcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            34689999999999999999999999999999999865432     234578999999988877654       589999


Q ss_pred             EccccCCC------------cchhhhhhhHHHHHHHHHHH----HcCCCEEEEEecCCcCCCC-ccccchHHHHHHHHHH
Q 023205          127 SCVGGFGS------------NSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVAN-YLLQGYYEGKRAAETE  189 (286)
Q Consensus       127 ~~a~~~~~------------~~~~~~~~~~~~~~l~~~a~----~~~v~~~v~~Ss~~~~~~~-~~~~~y~~sK~~~E~~  189 (286)
                      ||||....            +...+++|+.++..+.+++.    +.+-.+||++||....... .....|+.+|...+.+
T Consensus        84 nnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~~~~~~~~~~~~Y~asKaal~~l  163 (261)
T 4h15_A           84 HMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQRVLPLPESTTAYAAAKAALSTY  163 (261)
T ss_dssp             ECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTTCHHHHHHHHHHHHH
T ss_pred             ECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEehhhccCCCCccHHHHHHHHHHHHH
Confidence            99985321            13567899999988877664    4455689999995322222 2356799999999986


Q ss_pred             HHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHh-cccCCCCCCCCCccCCCccHHHHHHHHHHH
Q 023205          190 LLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQH-AKPLSQLPLVGPLFTPPVNVTVVAKVAVRA  262 (286)
Q Consensus       190 ~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~  262 (286)
                      .+.      ..|++++.|.||.+-.+.............+...+..... ......+|+     ..+...+|+|++++.+
T Consensus       164 t~~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl-----gR~g~peevA~~v~fL  238 (261)
T 4h15_A          164 SKAMSKEVSPKGVRVVRVSPGWIETEASVRLAERLAKQAGTDLEGGKKIIMDGLGGIPL-----GRPAKPEEVANLIAFL  238 (261)
T ss_dssp             HHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCCTT-----SSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHhhhhCeEEEEEeCCCcCCcchhhhhHHHHHhhccchhhHHHHHHHHhcCCCC-----CCCcCHHHHHHHHHHH
Confidence            652      5799999999999864321100000000000000000000 111123333     2467899999999999


Q ss_pred             hcCC--CCCCCeeEecccc
Q 023205          263 ATDP--VFPPGIVDVHGIL  279 (286)
Q Consensus       263 l~~~--~~~~~~~~l~~~~  279 (286)
                      +...  ...|+++.+.|+-
T Consensus       239 aS~~a~~itG~~i~VDGG~  257 (261)
T 4h15_A          239 ASDRAASITGAEYTIDGGT  257 (261)
T ss_dssp             HSGGGTTCCSCEEEESTTC
T ss_pred             hCchhcCccCcEEEECCcC
Confidence            8643  3468999998864

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=99.83  E-value=1.3e-19  Score=148.64  Aligned_cols=210  Identities=16%  Similarity=0.086  Sum_probs=151.2

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc---cccCCceeEEeccCCCHhHHHHHhc--CCCEEEEc
Q 023205           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR---DSWANNVIWHQGNLLSSDSWKEALD--GVTAVISC  128 (286)
Q Consensus        54 ~~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~---~~~~~~~~~i~~Dl~d~~~~~~~~~--~~d~vi~~  128 (286)
                      ...|+++||||++.||+.+++.|++.|.+|++.+|+..+...   .....++..+.+|++|++.++++++  ++|++|||
T Consensus         7 L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~g~iDiLVNN   86 (247)
T 4hp8_A            7 LEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPDETLDIIAKDGGNASALLIDFADPLAAKDSFTDAGFDILVNN   86 (247)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTSTTTTTTSSTTTCCCEEEEC
T ss_pred             CCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHhCCCCEEEEC
Confidence            457899999999999999999999999999999998654211   1224578899999999998887775  48999999


Q ss_pred             cccCC----------CcchhhhhhhHHHHHHHHHHHH----cC-CCEEEEEecCCcCCCCccccchHHHHHHHHHHHHH-
Q 023205          129 VGGFG----------SNSYMYKINGTANINAIRAASE----KG-VKRFVYISAADFGVANYLLQGYYEGKRAAETELLT-  192 (286)
Q Consensus       129 a~~~~----------~~~~~~~~~~~~~~~l~~~a~~----~~-v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~~-  192 (286)
                      ||...          .++..+++|+.++..+.+++.+    .+ -.+||++||...-........|..+|.....+.+. 
T Consensus        87 AGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~g~~~~~~Y~asKaav~~ltr~l  166 (247)
T 4hp8_A           87 AGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQGGIRVPSYTAAKHGVAGLTKLL  166 (247)
T ss_dssp             CCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCSSCHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCCCCCCChHHHHHHHHHHHHHHHH
Confidence            99653          2345678999999988886532    33 35899999953323333456799999999986652 


Q ss_pred             -----hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcCCC
Q 023205          193 -----RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDPV  267 (286)
Q Consensus       193 -----~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~~  267 (286)
                           ..|++++.|.||.+-.+......       .. ........   ..+|+     ..+-..+|+|.+++.++....
T Consensus       167 A~Ela~~gIrVNaV~PG~i~T~~~~~~~-------~~-~~~~~~~~---~~~Pl-----gR~g~peeiA~~v~fLaSd~a  230 (247)
T 4hp8_A          167 ANEWAAKGINVNAIAPGYIETNNTEALR-------AD-AARNKAIL---ERIPA-----GRWGHSEDIAGAAVFLSSAAA  230 (247)
T ss_dssp             HHHHGGGTEEEEEEEECSBCSGGGHHHH-------TS-HHHHHHHH---TTCTT-----SSCBCTHHHHHHHHHHTSGGG
T ss_pred             HHHHhhcCeEEEEEeeCCCCCcchhhcc-------cC-HHHHHHHH---hCCCC-----CCCcCHHHHHHHHHHHhCchh
Confidence                 67999999999999654321100       00 01111111   22333     235678999999999986543


Q ss_pred             --CCCCeeEecccc
Q 023205          268 --FPPGIVDVHGIL  279 (286)
Q Consensus       268 --~~~~~~~l~~~~  279 (286)
                        ..|+++.+.|+-
T Consensus       231 ~~iTG~~i~VDGG~  244 (247)
T 4hp8_A          231 DYVHGAILNVDGGW  244 (247)
T ss_dssp             TTCCSCEEEESTTG
T ss_pred             cCCcCCeEEECccc
Confidence              468999998873

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=99.83  E-value=1.6e-18  Score=144.45  Aligned_cols=210  Identities=12%  Similarity=0.011  Sum_probs=147.5

Q ss_pred             CCCCeEEEEcCCC--hhHHHHHHHHHHCCCeEEEEecCCCccc------ccccCCceeEEeccCCCHhHHHHHhc-----
Q 023205           54 PPSEKLLVLGGNG--FVGSHICREALDRGLTVASLSRSGRSSL------RDSWANNVIWHQGNLLSSDSWKEALD-----  120 (286)
Q Consensus        54 ~~~~~VlVtGatG--~iG~~l~~~Ll~~g~~V~~l~R~~~~~~------~~~~~~~~~~i~~Dl~d~~~~~~~~~-----  120 (286)
                      ...|+++||||+|  .||.++++.|+++|++|++..|+.+...      .+....++.++++|++|+++++++++     
T Consensus         4 l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   83 (256)
T 4fs3_A            4 LENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGKD   83 (256)
T ss_dssp             CTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            4578999999887  8999999999999999999999865421      12223578999999999988877664     


Q ss_pred             --CCCEEEEccccCCC----------c----chhhhhhhHHHHHHHHHHHHcC--CCEEEEEecCCcCCCCccccchHHH
Q 023205          121 --GVTAVISCVGGFGS----------N----SYMYKINGTANINAIRAASEKG--VKRFVYISAADFGVANYLLQGYYEG  182 (286)
Q Consensus       121 --~~d~vi~~a~~~~~----------~----~~~~~~~~~~~~~l~~~a~~~~--v~~~v~~Ss~~~~~~~~~~~~y~~s  182 (286)
                        .+|++|||||....          .    ...+++|..+...+.+.+....  -.+||++||...-........|+.+
T Consensus        84 ~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~~~~~~~~~~~~Y~as  163 (256)
T 4fs3_A           84 VGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGGEFAVQNYNVMGVA  163 (256)
T ss_dssp             HCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECGGGTSCCTTTHHHHHH
T ss_pred             hCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEeccccccCcccchhhHHH
Confidence              58999999985421          0    1234677777777777765432  2389999996433333445789999


Q ss_pred             HHHHHHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHH
Q 023205          183 KRAAETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVA  256 (286)
Q Consensus       183 K~~~E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva  256 (286)
                      |...+.+.+.      ..|++++.|.||.+..+.....        ...-+.......   .+|+     ..+...+|+|
T Consensus       164 Kaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~--------~~~~~~~~~~~~---~~Pl-----~R~g~peevA  227 (256)
T 4fs3_A          164 KASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGV--------GGFNTILKEIKE---RAPL-----KRNVDQVEVG  227 (256)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTC--------TTHHHHHHHHHH---HSTT-----SSCCCHHHHH
T ss_pred             HHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhhhc--------cCCHHHHHHHHh---cCCC-----CCCcCHHHHH
Confidence            9999886642      5799999999998865433211        111111111111   1232     2356889999


Q ss_pred             HHHHHHhcCC--CCCCCeeEecccc
Q 023205          257 KVAVRAATDP--VFPPGIVDVHGIL  279 (286)
Q Consensus       257 ~~~~~~l~~~--~~~~~~~~l~~~~  279 (286)
                      ++++.++...  ...|+++.+.|+-
T Consensus       228 ~~v~fL~Sd~a~~iTG~~i~VDGG~  252 (256)
T 4fs3_A          228 KTAAYLLSDLSSGVTGENIHVDSGF  252 (256)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHhCchhcCccCCEEEECcCH
Confidence            9999999653  3568999998874

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.83  E-value=1.5e-19  Score=163.70  Aligned_cols=189  Identities=20%  Similarity=0.214  Sum_probs=141.4

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCe-EEEEecCCCccc--c------cccCCceeEEeccCCCHhHHHHHhcCC---
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLT-VASLSRSGRSSL--R------DSWANNVIWHQGNLLSSDSWKEALDGV---  122 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~-V~~l~R~~~~~~--~------~~~~~~~~~i~~Dl~d~~~~~~~~~~~---  122 (286)
                      ..++||||||+|+||.++++.|+++|++ |+++.|+.....  .      .....++.++.+|++|.+++.++++++   
T Consensus       225 ~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i~~~  304 (486)
T 2fr1_A          225 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDD  304 (486)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHHHhc
Confidence            4679999999999999999999999985 999999864211  0      112357899999999999999998765   


Q ss_pred             ---CEEEEccccCCCc----------chhhhhhhHHHHHHHHHHHHcCCCEEEEEecCC--cCCCCccccchHHHHHHHH
Q 023205          123 ---TAVISCVGGFGSN----------SYMYKINGTANINAIRAASEKGVKRFVYISAAD--FGVANYLLQGYYEGKRAAE  187 (286)
Q Consensus       123 ---d~vi~~a~~~~~~----------~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~~--~~~~~~~~~~y~~sK~~~E  187 (286)
                         |+|||+||...+.          ...+++|+.++.++.++++..+.++||++||..  ++.  .....|+.+|...+
T Consensus       305 g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~V~~SS~a~~~g~--~g~~~Yaaaka~l~  382 (486)
T 2fr1_A          305 VPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAFGA--PGLGGYAPGNAYLD  382 (486)
T ss_dssp             SCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHTCC--TTCTTTHHHHHHHH
T ss_pred             CCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcChHhcCCC--CCCHHHHHHHHHHH
Confidence               9999999976421          245688999999999999888889999999942  332  34568999999999


Q ss_pred             HHHHH--hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcC
Q 023205          188 TELLT--RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATD  265 (286)
Q Consensus       188 ~~~~~--~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~  265 (286)
                      .+..+  ..|+++++|+||.+.++.....             ....      .+   ......+++.+|+++++..++..
T Consensus       383 ~la~~~~~~gi~v~~i~pG~~~~~gm~~~-------------~~~~------~~---~~~g~~~i~~e~~a~~l~~~l~~  440 (486)
T 2fr1_A          383 GLAQQRRSDGLPATAVAWGTWAGSGMAEG-------------PVAD------RF---RRHGVIEMPPETACRALQNALDR  440 (486)
T ss_dssp             HHHHHHHHTTCCCEEEEECCBC-------------------------------C---TTTTEECBCHHHHHHHHHHHHHT
T ss_pred             HHHHHHHhcCCeEEEEECCeeCCCcccch-------------hHHH------HH---HhcCCCCCCHHHHHHHHHHHHhC
Confidence            86653  5799999999999876532110             0000      00   01123578999999999999987


Q ss_pred             CC
Q 023205          266 PV  267 (286)
Q Consensus       266 ~~  267 (286)
                      +.
T Consensus       441 ~~  442 (486)
T 2fr1_A          441 AE  442 (486)
T ss_dssp             TC
T ss_pred             CC
Confidence            65

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=99.83  E-value=4.6e-19  Score=148.85  Aligned_cols=217  Identities=15%  Similarity=0.069  Sum_probs=148.1

Q ss_pred             CCeEEEEcC--CChhHHHHHHHHHHCCCeEEEEecCCCcc---cccccCCceeEEeccCCCHhHHHHHhc----------
Q 023205           56 SEKLLVLGG--NGFVGSHICREALDRGLTVASLSRSGRSS---LRDSWANNVIWHQGNLLSSDSWKEALD----------  120 (286)
Q Consensus        56 ~~~VlVtGa--tG~iG~~l~~~Ll~~g~~V~~l~R~~~~~---~~~~~~~~~~~i~~Dl~d~~~~~~~~~----------  120 (286)
                      .++++||||  +|+||++++++|+++|++|++++|+.++.   ..+....++.++.+|++|+++++++++          
T Consensus         7 ~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~~   86 (269)
T 2h7i_A            7 GKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIGAGN   86 (269)
T ss_dssp             TCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHCTTC
T ss_pred             CCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhcCCCceEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence            578999999  99999999999999999999999986442   112223468899999999998888775          


Q ss_pred             CCCEEEEccccCCC---------------cchhhhhhhHHHHHHHHHHHHcC--CCEEEEEecCCcCCCCccccchHHHH
Q 023205          121 GVTAVISCVGGFGS---------------NSYMYKINGTANINAIRAASEKG--VKRFVYISAADFGVANYLLQGYYEGK  183 (286)
Q Consensus       121 ~~d~vi~~a~~~~~---------------~~~~~~~~~~~~~~l~~~a~~~~--v~~~v~~Ss~~~~~~~~~~~~y~~sK  183 (286)
                      ++|++|||||....               ....+++|+.++.++++++...-  -.+||++||... ........|+.+|
T Consensus        87 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~iss~~~-~~~~~~~~Y~asK  165 (269)
T 2h7i_A           87 KLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPS-RAMPAYNWMTVAK  165 (269)
T ss_dssp             CEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCS-SCCTTTHHHHHHH
T ss_pred             CceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEcCccc-cccCchHHHHHHH
Confidence            78999999986531               12456899999999999986542  148999998532 2233456799999


Q ss_pred             HHHHHHHHH------hCCCcEEEEeeCeeecCCCCCccc--cCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHH
Q 023205          184 RAAETELLT------RYPYGGVILRPGFIYGTRTVGGMK--LPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVV  255 (286)
Q Consensus       184 ~~~E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dv  255 (286)
                      ...+.+.+.      ..|+++++++||.+..+.......  .+... ....+.+.....  ...|.    .+.+...+|+
T Consensus       166 aa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~p~----~rr~~~p~dv  238 (269)
T 2h7i_A          166 SALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEA-GAQIQLLEEGWD--QRAPI----GWNMKDATPV  238 (269)
T ss_dssp             HHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHH-HHHHHHHHHHHH--HHCTT----CCCTTCCHHH
T ss_pred             HHHHHHHHHHHHHhcccCcEEEEEecCcccchhhhccccccchhhH-HHHHHHHHHhhh--ccCCc----ccCCCCHHHH
Confidence            999986653      468999999999886432100000  00000 000000000000  01121    0135688999


Q ss_pred             HHHHHHHhcCCC--CCCCeeEeccccc
Q 023205          256 AKVAVRAATDPV--FPPGIVDVHGILR  280 (286)
Q Consensus       256 a~~~~~~l~~~~--~~~~~~~l~~~~~  280 (286)
                      |++++.++....  ..|+.+.+.|+..
T Consensus       239 A~~v~~L~s~~~~~itG~~i~vdGG~~  265 (269)
T 2h7i_A          239 AKTVCALLSDWLPATTGDIIYADGGAH  265 (269)
T ss_dssp             HHHHHHHHSSSCTTCCSEEEEESTTGG
T ss_pred             HHHHHHHhCchhccCcceEEEecCCee
Confidence            999999997533  4678999988754

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=99.81  E-value=4.9e-19  Score=158.89  Aligned_cols=209  Identities=14%  Similarity=0.022  Sum_probs=147.5

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc-c-ccCCceeEEeccCCCHhHHHHHhc-------C-CCE
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-D-SWANNVIWHQGNLLSSDSWKEALD-------G-VTA  124 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~-~-~~~~~~~~i~~Dl~d~~~~~~~~~-------~-~d~  124 (286)
                      ..++++||||+|+||.++++.|+++|++|++++|+...... + ....+++++.+|++|.++++++++       + +|+
T Consensus       212 ~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~~~l~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~~g~~id~  291 (454)
T 3u0b_A          212 DGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKVGGTALTLDVTADDAVDKITAHVTEHHGGKVDI  291 (454)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHTCEEEECCTTSTTHHHHHHHHHHHHSTTCCSE
T ss_pred             CCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHHcCCCceE
Confidence            46799999999999999999999999999999987532111 1 111256789999999988887764       3 999


Q ss_pred             EEEccccCCCc----------chhhhhhhHHHHHHHHHHHHc----CCCEEEEEecCCcCCCCccccchHHHHHHHHHHH
Q 023205          125 VISCVGGFGSN----------SYMYKINGTANINAIRAASEK----GVKRFVYISAADFGVANYLLQGYYEGKRAAETEL  190 (286)
Q Consensus       125 vi~~a~~~~~~----------~~~~~~~~~~~~~l~~~a~~~----~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~  190 (286)
                      ||||||...+.          ...+++|+.++.++.+++...    +..+||++||...-........|+.+|...+.+.
T Consensus       292 lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~~g~~g~~~YaasKaal~~l~  371 (454)
T 3u0b_A          292 LVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGNRGQTNYATTKAGMIGLA  371 (454)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHHHCCTTCHHHHHHHHHHHHHH
T ss_pred             EEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhCCCCCCCHHHHHHHHHHHHHH
Confidence            99999976421          256789999999999998765    4569999999532222334568999999887765


Q ss_pred             HH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhc
Q 023205          191 LT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAAT  264 (286)
Q Consensus       191 ~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~  264 (286)
                      ..      ..|+++++|.||.+..+......       ....+.. ...     .+     ...+...+|+|++++.++.
T Consensus       372 ~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~-------~~~~~~~-~~~-----~~-----l~r~g~pedvA~~v~fL~s  433 (454)
T 3u0b_A          372 EALAPVLADKGITINAVAPGFIETKMTEAIP-------LATREVG-RRL-----NS-----LFQGGQPVDVAELIAYFAS  433 (454)
T ss_dssp             HHHHHHHHTTTCEEEEEEECSBCC-----------------CHHH-HHS-----BT-----TSSCBCHHHHHHHHHHHHC
T ss_pred             HHHHHHhhhcCcEEEEEEcCcccChhhhhcc-------hhhHHHH-Hhh-----cc-----ccCCCCHHHHHHHHHHHhC
Confidence            42      47899999999999765432110       0000111 110     11     1234688999999999987


Q ss_pred             CC--CCCCCeeEecccccc
Q 023205          265 DP--VFPPGIVDVHGILRY  281 (286)
Q Consensus       265 ~~--~~~~~~~~l~~~~~~  281 (286)
                      ..  ...|+++++.|...+
T Consensus       434 ~~a~~itG~~i~vdGG~~l  452 (454)
T 3u0b_A          434 PASNAVTGNTIRVCGQAML  452 (454)
T ss_dssp             GGGTTCCSCEEEESSSBSC
T ss_pred             CccCCCCCcEEEECCcccc
Confidence            43  356899999887543

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.81  E-value=1.5e-18  Score=157.81  Aligned_cols=191  Identities=15%  Similarity=0.131  Sum_probs=142.3

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCCCccc--c------cccCCceeEEeccCCCHhHHHHHhcC--CC
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSL--R------DSWANNVIWHQGNLLSSDSWKEALDG--VT  123 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~--~------~~~~~~~~~i~~Dl~d~~~~~~~~~~--~d  123 (286)
                      ..++||||||+|+||.+++++|+++|+ +|+++.|+.....  .      .....++.++.+|++|.+.+.+++++  +|
T Consensus       258 ~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~~~ld  337 (511)
T 2z5l_A          258 PSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAALVTAYPPN  337 (511)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHHSCCS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhcCCCc
Confidence            467999999999999999999999998 6899999864211  0      11234688999999999999999976  99


Q ss_pred             EEEEccccCCCc----------chhhhhhhHHHHHHHHHHHHc-CCCEEEEEecCCcCCCCccccchHHHHHHHHHHHHH
Q 023205          124 AVISCVGGFGSN----------SYMYKINGTANINAIRAASEK-GVKRFVYISAADFGVANYLLQGYYEGKRAAETELLT  192 (286)
Q Consensus       124 ~vi~~a~~~~~~----------~~~~~~~~~~~~~l~~~a~~~-~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~~  192 (286)
                      +||||||...+.          ...+++|+.++.++.+++... +.++||++||...-........|+.+|...|.+...
T Consensus       338 ~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~~V~~SS~a~~~g~~g~~~YaaaKa~ld~la~~  417 (511)
T 2z5l_A          338 AVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADIKGLDAFVLFSSVTGTWGNAGQGAYAAANAALDALAER  417 (511)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCTTCCCEEEEEEGGGTTCCTTBHHHHHHHHHHHHHHHH
T ss_pred             EEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeCHHhcCCCCCCHHHHHHHHHHHHHHHH
Confidence            999999976432          245688999999999998776 778999999953222233457899999999997764


Q ss_pred             --hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcCCC
Q 023205          193 --RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDPV  267 (286)
Q Consensus       193 --~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~~  267 (286)
                        ..|+++++|+||.+.+......         .....+.             ...+.+++.+|+++++..++..+.
T Consensus       418 ~~~~gi~v~sv~pG~~~~tgm~~~---------~~~~~~~-------------~~g~~~l~~e~~a~~l~~al~~~~  472 (511)
T 2z5l_A          418 RRAAGLPATSVAWGLWGGGGMAAG---------AGEESLS-------------RRGLRAMDPDAAVDALLGAMGRND  472 (511)
T ss_dssp             HHTTTCCCEEEEECCBCSTTCCCC---------HHHHHHH-------------HHTBCCBCHHHHHHHHHHHHHHTC
T ss_pred             HHHcCCcEEEEECCcccCCccccc---------ccHHHHH-------------hcCCCCCCHHHHHHHHHHHHhCCC
Confidence              5799999999998843222111         0001111             011346899999999999997654

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=99.80  E-value=2.9e-19  Score=147.92  Aligned_cols=204  Identities=12%  Similarity=0.040  Sum_probs=135.3

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCeEEEE-e--cCCCcccc--cccCCceeEEeccCCCHhHH-HHH---hcCCCEEEE
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGLTVASL-S--RSGRSSLR--DSWANNVIWHQGNLLSSDSW-KEA---LDGVTAVIS  127 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l-~--R~~~~~~~--~~~~~~~~~i~~Dl~d~~~~-~~~---~~~~d~vi~  127 (286)
                      |+++||||+|+||++++++|+++|++|+++ .  |+.++...  ... .+.++.  |..+.+.+ +++   +.++|+|||
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~-~~~~~~--~~~~v~~~~~~~~~~~g~iD~lv~   78 (244)
T 1zmo_A            2 VIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESEN-PGTIAL--AEQKPERLVDATLQHGEAIDTIVS   78 (244)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHS-TTEEEC--CCCCGGGHHHHHGGGSSCEEEEEE
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHh-CCCccc--CHHHHHHHHHHHHHHcCCCCEEEE
Confidence            689999999999999999999999999999 6  87543211  111 223322  44333222 222   236899999


Q ss_pred             ccccCCC-------------cchhhhhhhHHHHHHHHHHH----HcCCCEEEEEecCCcCCCCccccchHHHHHHHHHHH
Q 023205          128 CVGGFGS-------------NSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEGKRAAETEL  190 (286)
Q Consensus       128 ~a~~~~~-------------~~~~~~~~~~~~~~l~~~a~----~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~  190 (286)
                      |||....             ....+++|+.++.++++++.    +.+..+||++||............|+.+|...+.+.
T Consensus        79 ~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~  158 (244)
T 1zmo_A           79 NDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSVGKKPLAYNPLYGPARAATVALV  158 (244)
T ss_dssp             CCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTCTTHHHHHHHHHHHH
T ss_pred             CCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhCCCCCCchHHHHHHHHHHHHH
Confidence            9986433             12467899999998888775    455679999999533223344568999999999876


Q ss_pred             HH------hCCCcEEEEeeCeeecCCCC--CccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHH
Q 023205          191 LT------RYPYGGVILRPGFIYGTRTV--GGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRA  262 (286)
Q Consensus       191 ~~------~~g~~~~ilRp~~v~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~  262 (286)
                      +.      ..|+++++++||.+..+...  ...  ..   ....+.+...     ..|.     ..+.+.+|+|++++.+
T Consensus       159 ~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~--~~---~~~~~~~~~~-----~~p~-----~r~~~pe~vA~~v~~l  223 (244)
T 1zmo_A          159 ESAAKTLSRDGILLYAIGPNFFNNPTYFPTSDW--EN---NPELRERVDR-----DVPL-----GRLGRPDEMGALITFL  223 (244)
T ss_dssp             HHHHHHHGGGTEEEEEEEESSBCBTTTBCHHHH--HH---CHHHHHHHHH-----HCTT-----CSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHhhcCcEEEEEeeCCCcCCcccccccc--cc---hHHHHHHHhc-----CCCC-----CCCcCHHHHHHHHHHH
Confidence            53      46899999999998765320  000  00   0001111110     1121     2367899999999999


Q ss_pred             hcCCC--CCCCeeEeccc
Q 023205          263 ATDPV--FPPGIVDVHGI  278 (286)
Q Consensus       263 l~~~~--~~~~~~~l~~~  278 (286)
                      +....  ..|+.+.+.|+
T Consensus       224 ~s~~~~~~tG~~i~vdgG  241 (244)
T 1zmo_A          224 ASRRAAPIVGQFFAFTGG  241 (244)
T ss_dssp             HTTTTGGGTTCEEEESTT
T ss_pred             cCccccCccCCEEEeCCC
Confidence            97643  45888988876

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=99.80  E-value=3.1e-19  Score=149.05  Aligned_cols=208  Identities=13%  Similarity=0.028  Sum_probs=139.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHH---CCCeEEEEecCCCcccc---cc----cCCceeEEeccCCCHhHHHHHhc-----
Q 023205           56 SEKLLVLGGNGFVGSHICREALD---RGLTVASLSRSGRSSLR---DS----WANNVIWHQGNLLSSDSWKEALD-----  120 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~---~g~~V~~l~R~~~~~~~---~~----~~~~~~~i~~Dl~d~~~~~~~~~-----  120 (286)
                      .++++||||+|+||++++++|++   +|++|++++|+.++...   +.    ...++.++.+|++|+++++++++     
T Consensus         6 ~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   85 (259)
T 1oaa_A            6 CAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVREL   85 (259)
T ss_dssp             SEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHHS
T ss_pred             CcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHHHhc
Confidence            57899999999999999999999   89999999998643211   10    13468899999999998877653     


Q ss_pred             ----CCC--EEEEccccCCC---------c----chhhhhhhHHHHHHHHHHHHcC------CCEEEEEecCCcCCCCcc
Q 023205          121 ----GVT--AVISCVGGFGS---------N----SYMYKINGTANINAIRAASEKG------VKRFVYISAADFGVANYL  175 (286)
Q Consensus       121 ----~~d--~vi~~a~~~~~---------~----~~~~~~~~~~~~~l~~~a~~~~------v~~~v~~Ss~~~~~~~~~  175 (286)
                          .+|  ++|||||....         .    ...+++|+.++.++++++....      ..+||++||...-.....
T Consensus        86 ~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  165 (259)
T 1oaa_A           86 PRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYKG  165 (259)
T ss_dssp             CCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSCCTT
T ss_pred             cccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCchhcCCCCC
Confidence                358  99999986421         1    2356899999999999987542      246999999543333345


Q ss_pred             ccchHHHHHHHHHHHHH----hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCcc
Q 023205          176 LQGYYEGKRAAETELLT----RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVN  251 (286)
Q Consensus       176 ~~~y~~sK~~~E~~~~~----~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~  251 (286)
                      ...|+.+|...+.+.+.    ..+++++++.||.+-.+.........  ......+.+..      ..|     ...+.+
T Consensus       166 ~~~Y~asKaa~~~~~~~la~e~~~i~vn~v~PG~v~T~~~~~~~~~~--~~~~~~~~~~~------~~p-----~~~~~~  232 (259)
T 1oaa_A          166 WGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDNDMQQLARETS--KDPELRSKLQK------LKS-----DGALVD  232 (259)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSHHHHHHHHHC--SCHHHHHHHHH------HHH-----TTCSBC
T ss_pred             ccHHHHHHHHHHHHHHHHHhhCCCceEEEecCCCcCcchHHHHhhcc--CChhHHHHHHH------hhh-----cCCcCC
Confidence            67899999999987653    23589999999988533210000000  00000011110      011     124689


Q ss_pred             HHHHHHHHHHHhcCCC-CCCCeeEec
Q 023205          252 VTVVAKVAVRAATDPV-FPPGIVDVH  276 (286)
Q Consensus       252 v~Dva~~~~~~l~~~~-~~~~~~~l~  276 (286)
                      ++|+|++++.++.... ..|+.+++.
T Consensus       233 p~dvA~~v~~l~~~~~~itG~~i~vd  258 (259)
T 1oaa_A          233 CGTSAQKLLGLLQKDTFQSGAHVDFY  258 (259)
T ss_dssp             HHHHHHHHHHHHHHCCSCTTEEEETT
T ss_pred             HHHHHHHHHHHHhhccccCCcEEecc
Confidence            9999999999987432 345555543

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=99.79  E-value=2.5e-19  Score=153.93  Aligned_cols=195  Identities=14%  Similarity=0.108  Sum_probs=134.8

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCC---------Cccc---ccccCCceeEEeccCCCHhHHHHHh---
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSG---------RSSL---RDSWANNVIWHQGNLLSSDSWKEAL---  119 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~---------~~~~---~~~~~~~~~~i~~Dl~d~~~~~~~~---  119 (286)
                      ..++++||||+|+||++++++|+++|++|++++|..         ++..   .+...... .+.+|+.|.+++++++   
T Consensus         8 ~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~-~~~~D~~~~~~~~~~~~~~   86 (319)
T 1gz6_A            8 DGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGG-KAVANYDSVEAGEKLVKTA   86 (319)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTC-EEEEECCCGGGHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCC-eEEEeCCCHHHHHHHHHHH
Confidence            357899999999999999999999999999986632         1110   00101111 2357999988766554   


Q ss_pred             ----cCCCEEEEccccCCC----------cchhhhhhhHHHHHHHHHH----HHcCCCEEEEEecCCcCCCCccccchHH
Q 023205          120 ----DGVTAVISCVGGFGS----------NSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYE  181 (286)
Q Consensus       120 ----~~~d~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a----~~~~v~~~v~~Ss~~~~~~~~~~~~y~~  181 (286)
                          ..+|+||||||....          ....+++|+.++.++++++    ++.+..+||++||...-........|+.
T Consensus        87 ~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~grIV~vsS~~~~~~~~~~~~Y~a  166 (319)
T 1gz6_A           87 LDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFGQANYSA  166 (319)
T ss_dssp             HHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHH
T ss_pred             HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCCCCHHHHH
Confidence                368999999996532          1246789999998888877    3456679999999421111234568999


Q ss_pred             HHHHHHHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHH
Q 023205          182 GKRAAETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVV  255 (286)
Q Consensus       182 sK~~~E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dv  255 (286)
                      +|...+.+.+.      ..|+++++++||.+ .+... ..      ..                    +....+++++|+
T Consensus       167 SK~a~~~~~~~la~el~~~gI~vn~v~PG~~-t~~~~-~~------~~--------------------~~~~~~~~p~dv  218 (319)
T 1gz6_A          167 AKLGLLGLANTLVIEGRKNNIHCNTIAPNAG-SRMTE-TV------MP--------------------EDLVEALKPEYV  218 (319)
T ss_dssp             HHHHHHHHHHHHHHHTGGGTEEEEEEEEECC-STTTG-GG------SC--------------------HHHHHHSCGGGT
T ss_pred             HHHHHHHHHHHHHHHhcccCEEEEEEeCCCc-ccccc-cc------CC--------------------hhhhccCCHHHH
Confidence            99999987653      46899999999986 32110 00      00                    001123588999


Q ss_pred             HHHHHHHhcCCC-CCCCeeEeccc
Q 023205          256 AKVAVRAATDPV-FPPGIVDVHGI  278 (286)
Q Consensus       256 a~~~~~~l~~~~-~~~~~~~l~~~  278 (286)
                      |++++.++..+. ..|++|++.|+
T Consensus       219 A~~~~~l~s~~~~~tG~~~~v~GG  242 (319)
T 1gz6_A          219 APLVLWLCHESCEENGGLFEVGAG  242 (319)
T ss_dssp             HHHHHHHTSTTCCCCSCEEEEETT
T ss_pred             HHHHHHHhCchhhcCCCEEEECCC
Confidence            999999997654 35788888765

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.76  E-value=1.9e-17  Score=149.62  Aligned_cols=193  Identities=13%  Similarity=0.097  Sum_probs=141.7

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCCCccc--c------cccCCceeEEeccCCCHhHHHHHhcC---
Q 023205           54 PPSEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSL--R------DSWANNVIWHQGNLLSSDSWKEALDG---  121 (286)
Q Consensus        54 ~~~~~VlVtGatG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~--~------~~~~~~~~~i~~Dl~d~~~~~~~~~~---  121 (286)
                      .+.+++|||||+|+||.++++.|+++|+ +|+++.|+.....  .      .....++.++.+|++|.+++.++++.   
T Consensus       237 ~~~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~  316 (496)
T 3mje_A          237 PVHGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAALLAELPE  316 (496)
T ss_dssp             CCCSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTCCT
T ss_pred             CCCCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence            3458999999999999999999999998 7888888743211  1      11235789999999999999988863   


Q ss_pred             ---CCEEEEccccC-CC----------cchhhhhhhHHHHHHHHHHHHcCCCEEEEEecCCcCCCCccccchHHHHHHHH
Q 023205          122 ---VTAVISCVGGF-GS----------NSYMYKINGTANINAIRAASEKGVKRFVYISAADFGVANYLLQGYYEGKRAAE  187 (286)
Q Consensus       122 ---~d~vi~~a~~~-~~----------~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E  187 (286)
                         +|+||||||.. .+          ....+++|+.++.++.+++...+..+||++||...-........|+.+|...+
T Consensus       317 ~g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~~~~~iV~~SS~a~~~g~~g~~~YaAaKa~ld  396 (496)
T 3mje_A          317 DAPLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADLDLDAFVLFSSGAAVWGSGGQPGYAAANAYLD  396 (496)
T ss_dssp             TSCEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTSCCSEEEEEEEHHHHTTCTTCHHHHHHHHHHH
T ss_pred             hCCCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeChHhcCCCCCcHHHHHHHHHHH
Confidence               79999999976 22          12467899999999999998888889999999521122234567999999999


Q ss_pred             HHHHH--hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcC
Q 023205          188 TELLT--RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATD  265 (286)
Q Consensus       188 ~~~~~--~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~  265 (286)
                      .+..+  ..|+++++|.||.+.+.......        .....+.+.             ....++.++.++++..++..
T Consensus       397 ala~~~~~~Gi~v~sV~pG~w~~~gm~~~~--------~~~~~l~~~-------------g~~~l~pe~~~~~l~~~l~~  455 (496)
T 3mje_A          397 ALAEHRRSLGLTASSVAWGTWGEVGMATDP--------EVHDRLVRQ-------------GVLAMEPEHALGALDQMLEN  455 (496)
T ss_dssp             HHHHHHHHTTCCCEEEEECEESSSCC--------------CHHHHHT-------------TEEEECHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhcCCeEEEEECCcccCCccccCh--------HHHHHHHhc-------------CCCCCCHHHHHHHHHHHHcC
Confidence            87754  68999999999988765432110        001111110             12246889999999999876


Q ss_pred             CC
Q 023205          266 PV  267 (286)
Q Consensus       266 ~~  267 (286)
                      +.
T Consensus       456 ~~  457 (496)
T 3mje_A          456 DD  457 (496)
T ss_dssp             TC
T ss_pred             CC
Confidence            54

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=99.76  E-value=5.4e-19  Score=152.48  Aligned_cols=156  Identities=12%  Similarity=0.053  Sum_probs=117.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC-------eEEEEecCCCc-ccc----cccCCceeEEeccCCCHhHHHHHhcCCC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGL-------TVASLSRSGRS-SLR----DSWANNVIWHQGNLLSSDSWKEALDGVT  123 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~-------~V~~l~R~~~~-~~~----~~~~~~~~~i~~Dl~d~~~~~~~~~~~d  123 (286)
                      +|+|+||||+||||++++..|+++|+       +|+++++.... ...    ......+.++ +|+.+.+++.++++++|
T Consensus         4 ~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~~~~~~-~di~~~~~~~~a~~~~D   82 (327)
T 1y7t_A            4 PVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLL-AGLEATDDPKVAFKDAD   82 (327)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTE-EEEEEESCHHHHTTTCS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhccccccc-CCeEeccChHHHhCCCC
Confidence            46899999999999999999999886       89999886421 000    1111122333 67777677888999999


Q ss_pred             EEEEccccCCC----cchhhhhhhHHHHHHHHHHHHcC-CC-EEEEEecCC----c---CC--CCccccchHHHHHHHHH
Q 023205          124 AVISCVGGFGS----NSYMYKINGTANINAIRAASEKG-VK-RFVYISAAD----F---GV--ANYLLQGYYEGKRAAET  188 (286)
Q Consensus       124 ~vi~~a~~~~~----~~~~~~~~~~~~~~l~~~a~~~~-v~-~~v~~Ss~~----~---~~--~~~~~~~y~~sK~~~E~  188 (286)
                      +|||+||....    ....++.|+.++.++++++++.+ .+ +|+++|+..    +   ..  ...+...|+.+|...|+
T Consensus        83 ~Vih~Ag~~~~~~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~~~~~~~~~~~~~~~~p~~~yg~tkl~~er  162 (327)
T 1y7t_A           83 YALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPANTNALIAYKNAPGLNPRNFTAMTRLDHNR  162 (327)
T ss_dssp             EEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHHHHTCTTSCGGGEEECCHHHHHH
T ss_pred             EEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCchhhhHHHHHHHcCCCChhheeccchHHHHH
Confidence            99999997532    24577899999999999999986 65 788777742    0   01  12355679999999998


Q ss_pred             HHH---HhCCCcEEEEeeCeeecCCCC
Q 023205          189 ELL---TRYPYGGVILRPGFIYGTRTV  212 (286)
Q Consensus       189 ~~~---~~~g~~~~ilRp~~v~g~~~~  212 (286)
                      +..   +..|++++++|+.++||++..
T Consensus       163 ~~~~~a~~~g~~~~~vr~~~V~G~h~~  189 (327)
T 1y7t_A          163 AKAQLAKKTGTGVDRIRRMTVWGNHSS  189 (327)
T ss_dssp             HHHHHHHHHTCCGGGEECCEEEBCSST
T ss_pred             HHHHHHHHhCcChhheeeeEEEcCCCC
Confidence            664   357999999999999998764

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=99.74  E-value=2e-16  Score=134.62  Aligned_cols=210  Identities=9%  Similarity=-0.032  Sum_probs=135.9

Q ss_pred             CCeEEEEcCC--ChhHHHHHHHHHHCCCeEEEEecCC-----------Ccc--cccccCC----ceeEEecc--------
Q 023205           56 SEKLLVLGGN--GFVGSHICREALDRGLTVASLSRSG-----------RSS--LRDSWAN----NVIWHQGN--------  108 (286)
Q Consensus        56 ~~~VlVtGat--G~iG~~l~~~Ll~~g~~V~~l~R~~-----------~~~--~~~~~~~----~~~~i~~D--------  108 (286)
                      .++++||||+  |+||++++++|+++|++|++++|++           .+.  ..+....    ....+.+|        
T Consensus         8 ~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d   87 (297)
T 1d7o_A            8 GKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFDNPED   87 (297)
T ss_dssp             TCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCCSGGG
T ss_pred             CCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhhhhhhccccccccccccccceeccchhh
Confidence            5789999999  9999999999999999999998642           110  1111000    12333333        


Q ss_pred             CC----C--------HhHHHHHh-------cCCCEEEEccccCC----C--------cchhhhhhhHHHHHHHHHHHHcC
Q 023205          109 LL----S--------SDSWKEAL-------DGVTAVISCVGGFG----S--------NSYMYKINGTANINAIRAASEKG  157 (286)
Q Consensus       109 l~----d--------~~~~~~~~-------~~~d~vi~~a~~~~----~--------~~~~~~~~~~~~~~l~~~a~~~~  157 (286)
                      +.    |        ++++++++       .++|++|||||...    .        ....+++|+.++.++++++...-
T Consensus        88 v~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m  167 (297)
T 1d7o_A           88 VPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIM  167 (297)
T ss_dssp             SCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGE
T ss_pred             hhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHh
Confidence            22    1        33444443       36899999998531    1        13467899999999999987641


Q ss_pred             --CCEEEEEecCCcCCCCccc-cchHHHHHHHHHHHHH------h-CCCcEEEEeeCeeecCCCCCccccCccccCchHH
Q 023205          158 --VKRFVYISAADFGVANYLL-QGYYEGKRAAETELLT------R-YPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPME  227 (286)
Q Consensus       158 --v~~~v~~Ss~~~~~~~~~~-~~y~~sK~~~E~~~~~------~-~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~  227 (286)
                        -.+||++||.......... ..|+.+|...+.+.+.      . .|+++++|+||.+.++.....        . ..+
T Consensus       168 ~~~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~PG~v~T~~~~~~--------~-~~~  238 (297)
T 1d7o_A          168 NPGGASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAI--------G-FID  238 (297)
T ss_dssp             EEEEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCC--------S-HHH
T ss_pred             ccCceEEEEeccccccCCCCcchHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEeccccccchhhhc--------c-ccH
Confidence              1589999995322222223 4799999999986642      2 699999999999988754321        0 111


Q ss_pred             HHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcCC--CCCCCeeEecccccc
Q 023205          228 MVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDP--VFPPGIVDVHGILRY  281 (286)
Q Consensus       228 ~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~--~~~~~~~~l~~~~~~  281 (286)
                      .+......  ..|.     ..+.+++|+|++++.++...  ...|+.+++.|+..+
T Consensus       239 ~~~~~~~~--~~p~-----~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdgG~~~  287 (297)
T 1d7o_A          239 TMIEYSYN--NAPI-----QKTLTADEVGNAAAFLVSPLASAITGATIYVDNGLNS  287 (297)
T ss_dssp             HHHHHHHH--HSSS-----CCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHhhc--cCCC-----CCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCcee
Confidence            11111110  1121     23578999999999998653  346889999887543

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=99.73  E-value=1.1e-16  Score=146.05  Aligned_cols=191  Identities=15%  Similarity=0.042  Sum_probs=138.5

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCe-EEEE-ecCCCc------------ccc------cccCCceeEEeccCCCHhH
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLT-VASL-SRSGRS------------SLR------DSWANNVIWHQGNLLSSDS  114 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~-V~~l-~R~~~~------------~~~------~~~~~~~~~i~~Dl~d~~~  114 (286)
                      ..+++|||||+|+||.++++.|+++|++ |+++ .|+..+            ...      .....++.++.+|++|.++
T Consensus       250 ~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~  329 (525)
T 3qp9_A          250 ADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTDAEA  329 (525)
T ss_dssp             TTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTSHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCCHHH
Confidence            4679999999999999999999999987 5555 677422            111      1123578999999999999


Q ss_pred             HHHHhcC------CCEEEEccccCCC----------cchhhhhhhHHHHHHHHHHHHcC-----CCEEEEEecCCcCCCC
Q 023205          115 WKEALDG------VTAVISCVGGFGS----------NSYMYKINGTANINAIRAASEKG-----VKRFVYISAADFGVAN  173 (286)
Q Consensus       115 ~~~~~~~------~d~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~~~~-----v~~~v~~Ss~~~~~~~  173 (286)
                      +.++++.      +|+||||||...+          ....+++|+.++.++.+++....     ..+||++||...-...
T Consensus       330 v~~~~~~i~~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~a~~~g~  409 (525)
T 3qp9_A          330 AARLLAGVSDAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVAAIWGG  409 (525)
T ss_dssp             HHHHHHTSCTTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEEGGGTTCC
T ss_pred             HHHHHHHHHhcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECCHHHcCCC
Confidence            9988864      6999999997532          13567899999999999998765     7799999995322233


Q ss_pred             ccccchHHHHHHHHHHHHH--hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCcc
Q 023205          174 YLLQGYYEGKRAAETELLT--RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVN  251 (286)
Q Consensus       174 ~~~~~y~~sK~~~E~~~~~--~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~  251 (286)
                      .....|+.+|...+.+..+  ..|+++++|.||.+ +......        ......+..             .....++
T Consensus       410 ~g~~~YaaaKa~l~~lA~~~~~~gi~v~sI~pG~~-~tgm~~~--------~~~~~~~~~-------------~g~~~l~  467 (525)
T 3qp9_A          410 AGQGAYAAGTAFLDALAGQHRADGPTVTSVAWSPW-EGSRVTE--------GATGERLRR-------------LGLRPLA  467 (525)
T ss_dssp             TTCHHHHHHHHHHHHHHTSCCSSCCEEEEEEECCB-TTSGGGS--------SHHHHHHHH-------------TTBCCBC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhCCCCEEEEECCcc-ccccccc--------hhhHHHHHh-------------cCCCCCC
Confidence            4467899999999987654  56899999999988 3221100        011111111             0124578


Q ss_pred             HHHHHHHHHHHhcCCC
Q 023205          252 VTVVAKVAVRAATDPV  267 (286)
Q Consensus       252 v~Dva~~~~~~l~~~~  267 (286)
                      .+++++++..++..+.
T Consensus       468 pee~a~~l~~~l~~~~  483 (525)
T 3qp9_A          468 PATALTALDTALGHGD  483 (525)
T ss_dssp             HHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHhCCC
Confidence            9999999999997654

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=99.70  E-value=4.9e-17  Score=151.20  Aligned_cols=197  Identities=13%  Similarity=0.052  Sum_probs=131.9

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecC---------CCcccc---cccCCceeEEeccCCCHhHHHHHhc--
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRS---------GRSSLR---DSWANNVIWHQGNLLSSDSWKEALD--  120 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~---------~~~~~~---~~~~~~~~~i~~Dl~d~~~~~~~~~--  120 (286)
                      ..++++||||+|+||++++++|+++|++|++++|.         ......   +....+.. +.+|+.|.++++++++  
T Consensus        18 ~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~D~~d~~~~~~~~~~~   96 (613)
T 3oml_A           18 DGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGE-AVADYNSVIDGAKVIETA   96 (613)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTCC-EEECCCCGGGHHHHHC--
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCCe-EEEEeCCHHHHHHHHHHH
Confidence            46799999999999999999999999999999882         221100   11111222 3479999888887775  


Q ss_pred             -----CCCEEEEccccCCC----------cchhhhhhhHHHHHHHHHH----HHcCCCEEEEEecCCcCCCCccccchHH
Q 023205          121 -----GVTAVISCVGGFGS----------NSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYE  181 (286)
Q Consensus       121 -----~~d~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a----~~~~v~~~v~~Ss~~~~~~~~~~~~y~~  181 (286)
                           .+|++|||||....          ....+++|+.++.++.+++    ++.+..+||++||...-........|+.
T Consensus        97 ~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g~IV~isS~a~~~~~~~~~~Y~a  176 (613)
T 3oml_A           97 IKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIYGNFGQVNYTA  176 (613)
T ss_dssp             --------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCHHHHHCCTTCHHHHH
T ss_pred             HHHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCCCCChHHHH
Confidence                 47999999997532          1356789999999998887    4455569999999532122234567999


Q ss_pred             HHHHHHHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHH
Q 023205          182 GKRAAETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVV  255 (286)
Q Consensus       182 sK~~~E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dv  255 (286)
                      +|...+.+.+.      ..|+++++|.||.+- +.....                        .   .+.....+..+|+
T Consensus       177 sKaal~~lt~~la~e~~~~gI~vn~v~Pg~~t-~~~~~~------------------------~---~~~~~~~~~pedv  228 (613)
T 3oml_A          177 AKMGLIGLANTVAIEGARNNVLCNVIVPTAAS-RMTEGI------------------------L---PDILFNELKPKLI  228 (613)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------CCC------------------------C---CHHHHTTCCGGGT
T ss_pred             HHHHHHHHHHHHHHHhCccCeEEEEEECCCCC-hhhhhc------------------------c---chhhhhcCCHHHH
Confidence            99999986653      468999999998642 111000                        0   0111234588999


Q ss_pred             HHHHHHHhcCCC-CCCCeeEeccccc
Q 023205          256 AKVAVRAATDPV-FPPGIVDVHGILR  280 (286)
Q Consensus       256 a~~~~~~l~~~~-~~~~~~~l~~~~~  280 (286)
                      |.+++.++.... ..|+++++.|+..
T Consensus       229 A~~v~~L~s~~~~~tG~~i~vdGG~~  254 (613)
T 3oml_A          229 APVVAYLCHESCEDNGSYIESAAGWA  254 (613)
T ss_dssp             HHHHHHTTSTTCCCCSCEEEEETTEE
T ss_pred             HHHHHHhcCCCcCCCceEEEECCCeE
Confidence            999999887653 3588999887643

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=99.68  E-value=2.1e-15  Score=130.17  Aligned_cols=220  Identities=11%  Similarity=0.017  Sum_probs=141.8

Q ss_pred             CCeEEEEcCCC--hhHHHHHHHHHHCCCeEEEEecCC---------Cc---ccc-----cccCCceeEEeccCCCH--h-
Q 023205           56 SEKLLVLGGNG--FVGSHICREALDRGLTVASLSRSG---------RS---SLR-----DSWANNVIWHQGNLLSS--D-  113 (286)
Q Consensus        56 ~~~VlVtGatG--~iG~~l~~~Ll~~g~~V~~l~R~~---------~~---~~~-----~~~~~~~~~i~~Dl~d~--~-  113 (286)
                      .++++||||++  +||.+++++|+++|++|++..|++         ++   ...     ......+.++.+|+++.  + 
T Consensus         2 ~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~   81 (329)
T 3lt0_A            2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAND   81 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGGG
T ss_pred             CcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchhh
Confidence            46899999875  999999999999999999777553         11   000     11123478889999876  5 


Q ss_pred             -----------------HHHHHhc-------CCCEEEEccccCC----C--------cchhhhhhhHHHHHHHHHHHHcC
Q 023205          114 -----------------SWKEALD-------GVTAVISCVGGFG----S--------NSYMYKINGTANINAIRAASEKG  157 (286)
Q Consensus       114 -----------------~~~~~~~-------~~d~vi~~a~~~~----~--------~~~~~~~~~~~~~~l~~~a~~~~  157 (286)
                                       ++.++++       .+|++|||||...    .        ....+++|+.++..+.+++...-
T Consensus        82 ~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m  161 (329)
T 3lt0_A           82 IDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIM  161 (329)
T ss_dssp             CCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGE
T ss_pred             hhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence                             5555543       5899999998531    1        23567899999999999886542


Q ss_pred             C--CEEEEEecCCcCCCCcccc-chHHHHHHHHHHHHH------h-CCCcEEEEeeCeeecCCCCCccccC---------
Q 023205          158 V--KRFVYISAADFGVANYLLQ-GYYEGKRAAETELLT------R-YPYGGVILRPGFIYGTRTVGGMKLP---------  218 (286)
Q Consensus       158 v--~~~v~~Ss~~~~~~~~~~~-~y~~sK~~~E~~~~~------~-~g~~~~ilRp~~v~g~~~~~~~~~~---------  218 (286)
                      .  .+||++||........... .|+.+|...+.+.+.      . .|+++++|.||.+..+.........         
T Consensus       162 ~~~g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~  241 (329)
T 3lt0_A          162 KPQSSIISLTYHASQKVVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLNNTYENNTNQ  241 (329)
T ss_dssp             EEEEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHTCC------------
T ss_pred             hhCCeEEEEeCccccCCCCcchHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEecceeechhHhhhhhhcccccccccc
Confidence            2  4899999953222223333 899999999886642      4 6999999999998643221110000         


Q ss_pred             -----cccc--------------------CchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcCC--CCCCC
Q 023205          219 -----LGVI--------------------GSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDP--VFPPG  271 (286)
Q Consensus       219 -----~~~~--------------------~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~--~~~~~  271 (286)
                           ...+                    ..+.+.+.....  ...|.     ..+...+|+|++++.++...  ...|+
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~p~-----~r~~~peevA~~v~fL~s~~a~~itG~  314 (329)
T 3lt0_A          242 NKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSE--KYAPL-----RQKLLSTDIGSVASFLLSRESRAITGQ  314 (329)
T ss_dssp             ------------------------------CHHHHHHHHHH--HHSSS-----CSCCCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred             cccccccccchhhcccccchhhhhhhhcccchhHHHHHHHh--hcCcc-----cCcCCHHHHHHHHHHHhCchhccccCc
Confidence                 0000                    000000011100  01121     23578899999999999643  35789


Q ss_pred             eeEeccccccc
Q 023205          272 IVDVHGILRYS  282 (286)
Q Consensus       272 ~~~l~~~~~~s  282 (286)
                      .+.+.|+..+-
T Consensus       315 ~i~vdGG~~~~  325 (329)
T 3lt0_A          315 TIYVDNGLNIM  325 (329)
T ss_dssp             EEEESTTGGGC
T ss_pred             EEEEcCCeeEE
Confidence            99999987653

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=99.67  E-value=9.5e-16  Score=131.53  Aligned_cols=216  Identities=12%  Similarity=-0.041  Sum_probs=134.7

Q ss_pred             CCeEEEEcC--CChhHHHHHHHHHHCCCeEEEEecCC-----------Ccc--cccccCC----ceeEEeccC-------
Q 023205           56 SEKLLVLGG--NGFVGSHICREALDRGLTVASLSRSG-----------RSS--LRDSWAN----NVIWHQGNL-------  109 (286)
Q Consensus        56 ~~~VlVtGa--tG~iG~~l~~~Ll~~g~~V~~l~R~~-----------~~~--~~~~~~~----~~~~i~~Dl-------  109 (286)
                      .++++||||  +|+||++++++|+++|++|++++|++           .+.  ..+....    .+.++.+|+       
T Consensus         9 gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~   88 (315)
T 2o2s_A            9 GQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRKLPDGSLIEFAGVYPLDAAFDKPED   88 (315)
T ss_dssp             TCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHHHBCTTSCBCCCSCEEECCTTCSSTTS
T ss_pred             CCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhhhhhhccccccccccccccccccccch
Confidence            578999999  89999999999999999999998752           110  0011001    134544443       


Q ss_pred             -----CC--------HhHHHHHh-------cCCCEEEEccccCC----C--------cchhhhhhhHHHHHHHHHHHHcC
Q 023205          110 -----LS--------SDSWKEAL-------DGVTAVISCVGGFG----S--------NSYMYKINGTANINAIRAASEKG  157 (286)
Q Consensus       110 -----~d--------~~~~~~~~-------~~~d~vi~~a~~~~----~--------~~~~~~~~~~~~~~l~~~a~~~~  157 (286)
                           +|        ++++++++       .++|++|||||...    .        ....+++|+.++.++++++...-
T Consensus        89 ~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m  168 (315)
T 2o2s_A           89 VPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQHFGPIM  168 (315)
T ss_dssp             SCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHSTTE
T ss_pred             hhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence                 22        33444443       36899999998531    1        12457899999999999986531


Q ss_pred             --CCEEEEEecCCcCCCCccc-cchHHHHHHHHHHHHH------h-CCCcEEEEeeCeeecCCCCCccccCccccCchHH
Q 023205          158 --VKRFVYISAADFGVANYLL-QGYYEGKRAAETELLT------R-YPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPME  227 (286)
Q Consensus       158 --v~~~v~~Ss~~~~~~~~~~-~~y~~sK~~~E~~~~~------~-~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~  227 (286)
                        -.+||++||.......... ..|+.+|...+.+.+.      . .|+++++|+||.+..+.....   .......+..
T Consensus       169 ~~~g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~~~~~---~~~~~~~~~~  245 (315)
T 2o2s_A          169 NEGGSAVTLSYLAAERVVPGYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSRAASAI---GKSGEKSFID  245 (315)
T ss_dssp             EEEEEEEEEEEGGGTSCCTTCCTTHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECCCCCHHHHHT---TCSSSSCHHH
T ss_pred             hcCCEEEEEecccccccCCCccHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEecccccchhhhhc---cccccchhHH
Confidence              1589999995322222222 4799999999886642      2 799999999999864321100   0000001111


Q ss_pred             HHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcCC--CCCCCeeEecccccc
Q 023205          228 MVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDP--VFPPGIVDVHGILRY  281 (286)
Q Consensus       228 ~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~--~~~~~~~~l~~~~~~  281 (286)
                      .+......  ..|.     ..+...+|+|++++.++...  ...|+.+.+.|+..+
T Consensus       246 ~~~~~~~~--~~p~-----~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~  294 (315)
T 2o2s_A          246 YAIDYSYN--NAPL-----RRDLHSDDVGGAALFLLSPLARAVSGVTLYVDNGLHA  294 (315)
T ss_dssp             HHHHHHHH--HSSS-----CCCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHHhc--cCCC-----CCCCCHHHHHHHHHHHhCchhccCcCCEEEECCCeee
Confidence            11111000  1121     23568999999999998743  346889999887644

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=99.66  E-value=8.1e-16  Score=132.20  Aligned_cols=215  Identities=11%  Similarity=-0.032  Sum_probs=118.8

Q ss_pred             CCeEEEEcC--CChhHHHHHHHHHHCCCeEEEEecCC-----------Ccccc--------------cccC-----Ccee
Q 023205           56 SEKLLVLGG--NGFVGSHICREALDRGLTVASLSRSG-----------RSSLR--------------DSWA-----NNVI  103 (286)
Q Consensus        56 ~~~VlVtGa--tG~iG~~l~~~Ll~~g~~V~~l~R~~-----------~~~~~--------------~~~~-----~~~~  103 (286)
                      .++++||||  +|+||+++++.|+++|++|++++|++           ++...              +...     ....
T Consensus         9 ~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (319)
T 2ptg_A            9 GKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPVDLVFDK   88 (319)
T ss_dssp             TCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC--------------------------------CCSE
T ss_pred             CCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhccccccccc
Confidence            578999999  89999999999999999999998642           11000              0000     0134


Q ss_pred             EEeccC------------CC--------HhHHHHHh-------cCCCEEEEccccCC----C--------cchhhhhhhH
Q 023205          104 WHQGNL------------LS--------SDSWKEAL-------DGVTAVISCVGGFG----S--------NSYMYKINGT  144 (286)
Q Consensus       104 ~i~~Dl------------~d--------~~~~~~~~-------~~~d~vi~~a~~~~----~--------~~~~~~~~~~  144 (286)
                      ++.+|+            +|        .+++++++       ..+|++|||||...    .        ....+++|+.
T Consensus        89 ~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~  168 (319)
T 2ptg_A           89 IYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAAVSSSSY  168 (319)
T ss_dssp             EEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHHHHHHHHTH
T ss_pred             cccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHHHHHhHhhH
Confidence            554443            22        22444443       36899999998531    1        1246789999


Q ss_pred             HHHHHHHHHHHcC--CCEEEEEecCCcCCCCccc-cchHHHHHHHHHHHHH------h-CCCcEEEEeeCeeecCCCCCc
Q 023205          145 ANINAIRAASEKG--VKRFVYISAADFGVANYLL-QGYYEGKRAAETELLT------R-YPYGGVILRPGFIYGTRTVGG  214 (286)
Q Consensus       145 ~~~~l~~~a~~~~--v~~~v~~Ss~~~~~~~~~~-~~y~~sK~~~E~~~~~------~-~g~~~~ilRp~~v~g~~~~~~  214 (286)
                      ++.++++++...-  -.+||++||.......... ..|+.+|...+.+.+.      . .|+++++|+||.+..+.....
T Consensus       169 g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~~~~~  248 (319)
T 2ptg_A          169 SFVSLLQHFLPLMKEGGSALALSYIASEKVIPGYGGGMSSAKAALESDCRTLAFEAGRARAVRVNCISAGPLKSRAASAI  248 (319)
T ss_dssp             HHHHHHHHHGGGEEEEEEEEEEEECC------------------THHHHHHHHHHHHHHHCCEEEEEEECCCC-------
T ss_pred             HHHHHHHHHHHHHhcCceEEEEeccccccccCccchhhHHHHHHHHHHHHHHHHHhccccCeeEEEEeeCCccChhhhhc
Confidence            9999999987641  1589999995322222222 4799999988886642      2 689999999999876532110


Q ss_pred             cccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcCC--CCCCCeeEeccccc
Q 023205          215 MKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDP--VFPPGIVDVHGILR  280 (286)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~--~~~~~~~~l~~~~~  280 (286)
                      .   ......+.+.+....  ....|.     ..+..++|+|++++.++...  ...|+.+.+.|+..
T Consensus       249 ~---~~~~~~~~~~~~~~~--~~~~p~-----~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG~~  306 (319)
T 2ptg_A          249 G---KAGDKTFIDLAIDYS--EANAPL-----QKELESDDVGRAALFLLSPLARAVTGATLYVDNGLH  306 (319)
T ss_dssp             ----------------------------------CCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTCT
T ss_pred             c---cccchhhHHHHHHHH--hccCCC-----CCCCCHHHHHHHHHHHhCcccCCccCCEEEECCCce
Confidence            0   000000000000000  001121     23578999999999998752  35688999988754

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.58  E-value=2.1e-14  Score=133.04  Aligned_cols=198  Identities=15%  Similarity=0.071  Sum_probs=133.4

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCccc-ccc--cCCceeEEeccC-CCHhHH-H---HHhcCCCEEE
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSL-RDS--WANNVIWHQGNL-LSSDSW-K---EALDGVTAVI  126 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~-~~~--~~~~~~~i~~Dl-~d~~~~-~---~~~~~~d~vi  126 (286)
                      ..++++||||++.||+.+++.|+++|++|++.+|+..+.. .+.  ...++..+.+|+ .+.+.+ +   +.+..+|++|
T Consensus       321 ~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~~~~~~~~~~~~~~~G~iDiLV  400 (604)
T 2et6_A          321 KDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDATKTVDEIKAAGGEAWPDQHDVAKDSEAIIKNVIDKYGTIDILV  400 (604)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCccHHHHHHHHHhcCCeEEEEEcChHHHHHHHHHHHHHhcCCCCEEE
Confidence            4578999999999999999999999999999887432211 111  123566777888 554332 2   2344689999


Q ss_pred             EccccCCC----------cchhhhhhhHHHHHHHHHHHH----cCCCEEEEEecCCcCCCCccccchHHHHHHHHHHHHH
Q 023205          127 SCVGGFGS----------NSYMYKINGTANINAIRAASE----KGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLT  192 (286)
Q Consensus       127 ~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~~----~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~~  192 (286)
                      ||||....          +...+++|+.++..+.+++..    .+-.+||++||...-........|+.+|.....+.+.
T Consensus       401 nNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag~~~~~~~~~Y~asKaal~~lt~~  480 (604)
T 2et6_A          401 NNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIYGNFGQANYSSSKAGILGLSKT  480 (604)
T ss_dssp             ECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCTTBHHHHHHHHHHHHHHHH
T ss_pred             ECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCCCChhHHHHHHHHHHHHHH
Confidence            99996421          235678999999988877643    3445899999953212223456799999999886642


Q ss_pred             ------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcCC
Q 023205          193 ------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDP  266 (286)
Q Consensus       193 ------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~  266 (286)
                            ..|+++++|.||.  .......          .   +.             +........+|+|.+++.++...
T Consensus       481 la~El~~~gIrVn~v~PG~--~T~m~~~----------~---~~-------------~~~~~~~~pe~vA~~v~~L~s~~  532 (604)
T 2et6_A          481 MAIEGAKNNIKVNIVAPHA--ETAMTLS----------I---MR-------------EQDKNLYHADQVAPLLVYLGTDD  532 (604)
T ss_dssp             HHHHHGGGTEEEEEEEECC--CCCC-----------------------------------CCSSCGGGTHHHHHHTTSTT
T ss_pred             HHHHhCccCeEEEEEcCCC--CCccccc----------c---Cc-------------hhhccCCCHHHHHHHHHHHhCCc
Confidence                  5789999999983  2111000          0   00             00112457899999999988653


Q ss_pred             C-CCCCeeEeccccc
Q 023205          267 V-FPPGIVDVHGILR  280 (286)
Q Consensus       267 ~-~~~~~~~l~~~~~  280 (286)
                      . ..|+++.+.|+..
T Consensus       533 ~~itG~~~~vdGG~~  547 (604)
T 2et6_A          533 VPVTGETFEIGGGWI  547 (604)
T ss_dssp             CCCCSCEEEEETTEE
T ss_pred             cCCCCcEEEECCCee
Confidence            3 4688999888643

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=99.57  E-value=3.4e-14  Score=124.45  Aligned_cols=156  Identities=13%  Similarity=0.036  Sum_probs=109.6

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHH-CCCeEEEEecCCCcccc-----------------cccCCceeEEeccCCCHhHHH
Q 023205           55 PSEKLLVLGGNGFVGSHICREALD-RGLTVASLSRSGRSSLR-----------------DSWANNVIWHQGNLLSSDSWK  116 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~-~g~~V~~l~R~~~~~~~-----------------~~~~~~~~~i~~Dl~d~~~~~  116 (286)
                      .+|++|||||++.||.++++.|++ .|++|+++.|+.+....                 ......+..+.+|++|+++++
T Consensus        60 ~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvtd~~~v~  139 (422)
T 3s8m_A           60 GPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAFSDAARA  139 (422)
T ss_dssp             SCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHHH
T ss_pred             CCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCCCHHHHH
Confidence            368999999999999999999999 99999999998654221                 111346788999999998776


Q ss_pred             HHh--------cCCCEEEEccccC-------------C--C-------------------------c----chhhhhhhH
Q 023205          117 EAL--------DGVTAVISCVGGF-------------G--S-------------------------N----SYMYKINGT  144 (286)
Q Consensus       117 ~~~--------~~~d~vi~~a~~~-------------~--~-------------------------~----~~~~~~~~~  144 (286)
                      +++        ..+|++|||||..             .  +                         .    ...+++|..
T Consensus       140 ~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~v~Vn~~  219 (422)
T 3s8m_A          140 QVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDTITVMGG  219 (422)
T ss_dssp             HHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSS
T ss_pred             HHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHHHHHHhhch
Confidence            554        4589999999751             0  0                         0    112344444


Q ss_pred             HHH-HHHHHHHHcCC----CEEEEEecCCcCCCCccc--cchHHHHHHHHHHHHH------hCCCcEEEEeeCeeecCC
Q 023205          145 ANI-NAIRAASEKGV----KRFVYISAADFGVANYLL--QGYYEGKRAAETELLT------RYPYGGVILRPGFIYGTR  210 (286)
Q Consensus       145 ~~~-~l~~~a~~~~v----~~~v~~Ss~~~~~~~~~~--~~y~~sK~~~E~~~~~------~~g~~~~ilRp~~v~g~~  210 (286)
                      +.. .+++++...+.    .++|++||.......+..  ..|+.+|...+.+.+.      ..|++++++.||.+-.+.
T Consensus       220 ~~~~~~~~a~~~~~m~~~gG~IVniSSi~g~~~~p~~~~~aY~ASKaAl~~lTrsLA~Ela~~GIRVNaVaPG~i~T~~  298 (422)
T 3s8m_A          220 QDWELWIDALEGAGVLADGARSVAFSYIGTEITWPIYWHGALGKAKVDLDRTAQRLNARLAKHGGGANVAVLKSVVTQA  298 (422)
T ss_dssp             HHHHHHHHHHHHTTCEEEEEEEEEEEECCCGGGHHHHTSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTT
T ss_pred             hHHHHHHHHHHHHHHhhCCCEEEEEeCchhhccCCCccchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEcCCCcChh
Confidence            443 45555543322    379999995322111222  6799999999986652      579999999999997654

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=99.54  E-value=3.7e-14  Score=138.62  Aligned_cols=200  Identities=14%  Similarity=0.064  Sum_probs=133.9

Q ss_pred             CCCeEEEEcCCCh-hHHHHHHHHHHCCCeEEEEe-cCCCcccc---cc------cCCceeEEeccCCCHhHHHHHhc---
Q 023205           55 PSEKLLVLGGNGF-VGSHICREALDRGLTVASLS-RSGRSSLR---DS------WANNVIWHQGNLLSSDSWKEALD---  120 (286)
Q Consensus        55 ~~~~VlVtGatG~-iG~~l~~~Ll~~g~~V~~l~-R~~~~~~~---~~------~~~~~~~i~~Dl~d~~~~~~~~~---  120 (286)
                      ..++++||||+|+ ||.++++.|+++|++|++++ |+.++...   +.      ...++.++.+|++|.++++++++   
T Consensus       475 ~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaLVe~I~  554 (1688)
T 2pff_A          475 KDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEFIY  554 (1688)
T ss_dssp             CSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHHHHHHH
T ss_pred             CCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHHHHHHH
Confidence            3578999999998 99999999999999999984 55433211   11      12368899999999988887653   


Q ss_pred             ----------CCCEEEEccccCCCc-------------chhhhhhhHHHHHHHHHHHH--c----CCCEEEEEecCCcCC
Q 023205          121 ----------GVTAVISCVGGFGSN-------------SYMYKINGTANINAIRAASE--K----GVKRFVYISAADFGV  171 (286)
Q Consensus       121 ----------~~d~vi~~a~~~~~~-------------~~~~~~~~~~~~~l~~~a~~--~----~v~~~v~~Ss~~~~~  171 (286)
                                .+|+||||||.....             ...+++|+.++.+++++++.  .    +-.+||++||... .
T Consensus       555 e~~~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krggGrIVnISSiAG-~  633 (1688)
T 2pff_A          555 DTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHG-T  633 (1688)
T ss_dssp             SCTTSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSCEEECCCCCSCTT-T
T ss_pred             HhccccccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCCCCEEEEEEChHh-c
Confidence                      489999999864221             24568999999988888733  1    1148999999522 1


Q ss_pred             CCccccchHHHHHHHHHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCc
Q 023205          172 ANYLLQGYYEGKRAAETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPL  245 (286)
Q Consensus       172 ~~~~~~~y~~sK~~~E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  245 (286)
                      .. ....|+.+|...+.++.+      ...++++.|.||++.+.......    ....          .....++     
T Consensus       634 ~G-g~saYaASKAAL~aLttrsLAeEla~~IRVNaVaPG~V~TT~M~~~~----e~~~----------~~l~~ip-----  693 (1688)
T 2pff_A          634 FG-GDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRGTGLMSAN----NIIA----------EGIEKMG-----  693 (1688)
T ss_dssp             SS-CBTTHHHHHHHHTHHHHHTTTSSCTTTEECCCCCCCCCCCCSSSCTT----TTCS----------TTTSSSS-----
T ss_pred             cC-CchHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEECcCcCCcccCCc----hHHH----------HHHHhCC-----
Confidence            11 456799999999997332      12288899999988743211100    0000          0001111     


Q ss_pred             cCCCccHHHHHHHHHHHhcCCC---CCCCeeEec
Q 023205          246 FTPPVNVTVVAKVAVRAATDPV---FPPGIVDVH  276 (286)
Q Consensus       246 ~~~~i~v~Dva~~~~~~l~~~~---~~~~~~~l~  276 (286)
                       ..+.+.+|+|++++.++....   ..++.+.+.
T Consensus       694 -lR~~sPEEVA~aIlFLaSd~sAs~ITGq~I~VD  726 (1688)
T 2pff_A          694 -VRTFSQKEMAFNLLGLLTPEVVELCQKSPVMAD  726 (1688)
T ss_dssp             -CCCCCCCTTHHHHHHHTSTTHHHHHTTSCCCCC
T ss_pred             -CCCCCHHHHHHHHHHHhCCCccccccCcEEEEE
Confidence             134578999999999987651   236666653

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=99.54  E-value=2.5e-13  Score=136.65  Aligned_cols=199  Identities=13%  Similarity=0.068  Sum_probs=134.2

Q ss_pred             CCCeEEEEcCCCh-hHHHHHHHHHHCCCeEEEEe-cCCCccc---cc---c---cCCceeEEeccCCCHhHHHHHhc---
Q 023205           55 PSEKLLVLGGNGF-VGSHICREALDRGLTVASLS-RSGRSSL---RD---S---WANNVIWHQGNLLSSDSWKEALD---  120 (286)
Q Consensus        55 ~~~~VlVtGatG~-iG~~l~~~Ll~~g~~V~~l~-R~~~~~~---~~---~---~~~~~~~i~~Dl~d~~~~~~~~~---  120 (286)
                      ..+++|||||+|+ ||.++++.|++.|++|++++ |+.++..   .+   .   ...++.++.+|++|.++++++++   
T Consensus       674 ~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv~~i~  753 (1887)
T 2uv8_A          674 KDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEFIY  753 (1887)
T ss_dssp             TTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHHHHHH
Confidence            3578999999998 99999999999999999985 5443211   01   0   13468899999999998887653   


Q ss_pred             ----------CCCEEEEccccCCCc-------------chhhhhhhHHHHHHHHHHHHcC------CCEEEEEecCCcCC
Q 023205          121 ----------GVTAVISCVGGFGSN-------------SYMYKINGTANINAIRAASEKG------VKRFVYISAADFGV  171 (286)
Q Consensus       121 ----------~~d~vi~~a~~~~~~-------------~~~~~~~~~~~~~l~~~a~~~~------v~~~v~~Ss~~~~~  171 (286)
                                .+|++|||||.....             ...+++|+.++..+++.++...      -.+||++||.....
T Consensus       754 ~~~~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~G~IVnISS~ag~~  833 (1887)
T 2uv8_A          754 DTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHGTF  833 (1887)
T ss_dssp             SCTTTTSCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCCEEEEEEECSCTTCS
T ss_pred             HhccccccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCCCCEEEEEcChHhcc
Confidence                      489999999965321             2456899999999988874322      14899999953211


Q ss_pred             CCccccchHHHHHHHHHHH-H---HhC--CCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCc
Q 023205          172 ANYLLQGYYEGKRAAETEL-L---TRY--PYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPL  245 (286)
Q Consensus       172 ~~~~~~~y~~sK~~~E~~~-~---~~~--g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  245 (286)
                      .  ....|+.+|...+.++ +   +..  .+++++|.||++.+.......       ......+ .      .++.    
T Consensus       834 g--g~~aYaASKAAL~~Lttr~lA~ela~~IrVNaV~PG~V~tT~m~~~~-------~~~~~~~-~------~~pl----  893 (1887)
T 2uv8_A          834 G--GDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRGTGLMSAN-------NIIAEGI-E------KMGV----  893 (1887)
T ss_dssp             S--CBTTHHHHHHHGGGHHHHHHHSSCTTTEEEEEEEECCEECC-----C-------CTTHHHH-H------TTSC----
T ss_pred             C--CCchHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEecccccccccccc-------hhHHHHH-H------hcCC----
Confidence            1  4567999999999872 2   111  299999999999743211100       0011111 1      1111    


Q ss_pred             cCCCccHHHHHHHHHHHhcCC---CCCCCeeEe
Q 023205          246 FTPPVNVTVVAKVAVRAATDP---VFPPGIVDV  275 (286)
Q Consensus       246 ~~~~i~v~Dva~~~~~~l~~~---~~~~~~~~l  275 (286)
                        .+.+.+|+|++++.++...   ...|..+.+
T Consensus       894 --r~~sPEEVA~avlfLaSd~~as~iTGq~I~V  924 (1887)
T 2uv8_A          894 --RTFSQKEMAFNLLGLLTPEVVELCQKSPVMA  924 (1887)
T ss_dssp             --CCEEHHHHHHHHHGGGSHHHHHHHHHSCEEE
T ss_pred             --CCCCHHHHHHHHHHHhCCCccccccCcEEEE
Confidence              3458999999999988654   123566665

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=99.53  E-value=1.9e-13  Score=137.20  Aligned_cols=199  Identities=13%  Similarity=0.045  Sum_probs=133.4

Q ss_pred             CCCeEEEEcCCCh-hHHHHHHHHHHCCCeEEEEecCCCcccc--------cc--cCCceeEEeccCCCHhHHHHHhc---
Q 023205           55 PSEKLLVLGGNGF-VGSHICREALDRGLTVASLSRSGRSSLR--------DS--WANNVIWHQGNLLSSDSWKEALD---  120 (286)
Q Consensus        55 ~~~~VlVtGatG~-iG~~l~~~Ll~~g~~V~~l~R~~~~~~~--------~~--~~~~~~~i~~Dl~d~~~~~~~~~---  120 (286)
                      ..+++|||||+|+ ||.++++.|+++|++|++++++......        +.  ...++.++.+|++|.+++.++++   
T Consensus       651 ~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv~~i~  730 (1878)
T 2uv9_A          651 QGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALVNYIY  730 (1878)
T ss_dssp             TTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence            3578999999999 9999999999999999998644322110        11  13468899999999998887763   


Q ss_pred             --------CCCEEEEccccCCCc-------------chhhhhhhHHHHHHHHHHHH--c----CCCEEEEEecCCcCCCC
Q 023205          121 --------GVTAVISCVGGFGSN-------------SYMYKINGTANINAIRAASE--K----GVKRFVYISAADFGVAN  173 (286)
Q Consensus       121 --------~~d~vi~~a~~~~~~-------------~~~~~~~~~~~~~l~~~a~~--~----~v~~~v~~Ss~~~~~~~  173 (286)
                              .+|+||||||.....             ...+++|+.++.++++.++.  .    +..+||++||... ...
T Consensus       731 ~~~~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~~G~IVnISS~ag-~~g  809 (1878)
T 2uv9_A          731 DTKNGLGWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRPAQVILPLSPNHG-TFG  809 (1878)
T ss_dssp             CSSSSCCCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCCEEECCEECSCSS-SSS
T ss_pred             HhhcccCCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCCEEEEEcchhh-ccC
Confidence                    489999999965321             24568999999888876432  1    1248999999521 111


Q ss_pred             ccccchHHHHHHHHHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccC
Q 023205          174 YLLQGYYEGKRAAETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFT  247 (286)
Q Consensus       174 ~~~~~y~~sK~~~E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  247 (286)
                       ....|+.+|...+.+...      ...++++.|.||++-|......           .........   .++.      
T Consensus       810 -g~~aYaASKAAL~aLt~~laAeEla~~IrVNaVaPG~V~gT~m~~~-----------~~~~~~~~~---~~pl------  868 (1878)
T 2uv9_A          810 -NDGLYSESKLALETLFNRWYSESWGNYLTICGAVIGWTRGTGLMSA-----------NNLVAEGVE---KLGV------  868 (1878)
T ss_dssp             -CCSSHHHHHHHHTTHHHHHHHSTTTTTEEEEEEEECCBCCTTSCSH-----------HHHTHHHHH---TTTC------
T ss_pred             -CchHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEecceecCccccc-----------chhhHHHHH---hcCC------
Confidence             356799999999986532      1238999999998863221100           011011111   1111      


Q ss_pred             CCccHHHHHHHHHHHhcCCC---CCCCeeEe
Q 023205          248 PPVNVTVVAKVAVRAATDPV---FPPGIVDV  275 (286)
Q Consensus       248 ~~i~v~Dva~~~~~~l~~~~---~~~~~~~l  275 (286)
                      .+.+.+|+|++++.++....   ..|..+.+
T Consensus       869 r~~sPeEVA~avlfLaSd~a~s~iTGq~I~V  899 (1878)
T 2uv9_A          869 RTFSQQEMAFNLLGLMAPAIVNLCQSDPVFA  899 (1878)
T ss_dssp             CCBCHHHHHHHHHHHHSHHHHHHHTTSCEEE
T ss_pred             CCCCHHHHHHHHHHHhCCcccccccCcEEEE
Confidence            24589999999999886542   24666665

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=99.52  E-value=2.5e-13  Score=118.00  Aligned_cols=155  Identities=12%  Similarity=0.031  Sum_probs=110.7

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHH-CCCeEEEEecCCCcccc-----------------cccCCceeEEeccCCCHhHHH
Q 023205           55 PSEKLLVLGGNGFVGSHICREALD-RGLTVASLSRSGRSSLR-----------------DSWANNVIWHQGNLLSSDSWK  116 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~-~g~~V~~l~R~~~~~~~-----------------~~~~~~~~~i~~Dl~d~~~~~  116 (286)
                      ..|++|||||++.||.++++.|++ .|++|+++.|+.+....                 ......+..+.+|++|+++++
T Consensus        46 ~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvtd~~~v~  125 (405)
T 3zu3_A           46 GPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAFSDEIKQ  125 (405)
T ss_dssp             CCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHHH
T ss_pred             CCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCCCHHHHH
Confidence            467999999999999999999999 99999999987654211                 112346788999999998887


Q ss_pred             HHhc-------CCCEEEEccccC---------------CC-----------------------------cchhhhhhhHH
Q 023205          117 EALD-------GVTAVISCVGGF---------------GS-----------------------------NSYMYKINGTA  145 (286)
Q Consensus       117 ~~~~-------~~d~vi~~a~~~---------------~~-----------------------------~~~~~~~~~~~  145 (286)
                      ++++       .+|++|||||..               .+                             +...+++|..+
T Consensus       126 ~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~v~Vn~~~  205 (405)
T 3zu3_A          126 LTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDSTVAVMGGE  205 (405)
T ss_dssp             HHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSSH
T ss_pred             HHHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHHHHhhchh
Confidence            7664       579999999853               00                             01234566655


Q ss_pred             HH-HHHHHHHHcCC----CEEEEEecCCcCCCCccc--cchHHHHHHHHHHHHH------hC-CCcEEEEeeCeeecC
Q 023205          146 NI-NAIRAASEKGV----KRFVYISAADFGVANYLL--QGYYEGKRAAETELLT------RY-PYGGVILRPGFIYGT  209 (286)
Q Consensus       146 ~~-~l~~~a~~~~v----~~~v~~Ss~~~~~~~~~~--~~y~~sK~~~E~~~~~------~~-g~~~~ilRp~~v~g~  209 (286)
                      .. .+++++...+.    .++|++||.......+..  ..|+.+|...+.+.+.      .. |++++++.||.+-.+
T Consensus       206 ~~~~~~~~~~~~~m~~~gG~IVniSSi~~~~~~p~~~~~aY~AaKaal~~ltrsLA~Ela~~~GIRVNaVaPG~i~T~  283 (405)
T 3zu3_A          206 DWQMWIDALLDAGVLAEGAQTTAFTYLGEKITHDIYWNGSIGAAKKDLDQKVLAIRESLAAHGGGDARVSVLKAVVSQ  283 (405)
T ss_dssp             HHHHHHHHHHHHTCEEEEEEEEEEECCCCGGGTTTTTTSHHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEECCCCCCH
T ss_pred             HHHHHHHHHHHHhhhhCCcEEEEEeCchhhCcCCCccchHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEEeCCCcCc
Confidence            54 45555443221    379999995322222222  6799999999986653      56 999999999988644

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.51  E-value=2.4e-13  Score=129.75  Aligned_cols=192  Identities=15%  Similarity=0.129  Sum_probs=135.9

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHH-HCCC-eEEEEecCCCccc--c------cccCCceeEEeccCCCHhHHHHHhcC---
Q 023205           55 PSEKLLVLGGNGFVGSHICREAL-DRGL-TVASLSRSGRSSL--R------DSWANNVIWHQGNLLSSDSWKEALDG---  121 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll-~~g~-~V~~l~R~~~~~~--~------~~~~~~~~~i~~Dl~d~~~~~~~~~~---  121 (286)
                      +.++++||||+|.||..+++.|. ++|. +|++++|+.....  .      .....++.++.+|++|.++++++++.   
T Consensus       529 ~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~~~~~~  608 (795)
T 3slk_A          529 AAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACDVADRETLAKVLASIPD  608 (795)
T ss_dssp             TTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCT
T ss_pred             cccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Confidence            46799999999999999999999 7897 5999999843211  1      11235789999999999999988864   


Q ss_pred             ---CCEEEEccccCCC----------cchhhhhhhHHHHHHHHHHHHcCCCEEEEEecCCcCCCCccccchHHHHHHHHH
Q 023205          122 ---VTAVISCVGGFGS----------NSYMYKINGTANINAIRAASEKGVKRFVYISAADFGVANYLLQGYYEGKRAAET  188 (286)
Q Consensus       122 ---~d~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~  188 (286)
                         +|+||||||...+          ....+++|+.|+.++.+++.. .. +||++||...-........|+.+|...+.
T Consensus       609 ~~~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~-~l-~iV~~SS~ag~~g~~g~~~YaAaka~~~a  686 (795)
T 3slk_A          609 EHPLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELIDP-DV-ALVLFSSVSGVLGSGGQGNYAAANSFLDA  686 (795)
T ss_dssp             TSCEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCT-TS-EEEEEEETHHHHTCSSCHHHHHHHHHHHH
T ss_pred             hCCCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHhh-CC-EEEEEccHHhcCCCCCCHHHHHHHHHHHH
Confidence               5999999997642          235678999999999998833 34 89999996322223345689999998887


Q ss_pred             HHHH--hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcCC
Q 023205          189 ELLT--RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDP  266 (286)
Q Consensus       189 ~~~~--~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~  266 (286)
                      +..+  ..|++++.|.||.+-.+.....          ..+.........         ....+..+++.+.+..++..+
T Consensus       687 lA~~~~~~Gi~v~sI~pG~v~t~g~~~~----------~~~~~~~~~~~~---------g~~~l~~~e~~~~~~~~l~~~  747 (795)
T 3slk_A          687 LAQQRQSRGLPTRSLAWGPWAEHGMAST----------LREAEQDRLARS---------GLLPISTEEGLSQFDAACGGA  747 (795)
T ss_dssp             HHHHHHHTTCCEEEEEECCCSCCCHHHH----------HHHHHHHHHHHT---------TBCCCCHHHHHHHHHHHHTSS
T ss_pred             HHHHHHHcCCeEEEEECCeECcchhhcc----------ccHHHHHHHHhc---------CCCCCCHHHHHHHHHHHHhCC
Confidence            6654  6899999999998864432100          001111111111         123467888888888888765


Q ss_pred             C
Q 023205          267 V  267 (286)
Q Consensus       267 ~  267 (286)
                      .
T Consensus       748 ~  748 (795)
T 3slk_A          748 H  748 (795)
T ss_dssp             C
T ss_pred             C
Confidence            4

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=99.51  E-value=1.3e-13  Score=121.53  Aligned_cols=156  Identities=9%  Similarity=-0.018  Sum_probs=108.9

Q ss_pred             CCCCeEEEEcCCChhHHH--HHHHHHHCCCeEEEEecCCCcccc-----------------cccCCceeEEeccCCCHhH
Q 023205           54 PPSEKLLVLGGNGFVGSH--ICREALDRGLTVASLSRSGRSSLR-----------------DSWANNVIWHQGNLLSSDS  114 (286)
Q Consensus        54 ~~~~~VlVtGatG~iG~~--l~~~Ll~~g~~V~~l~R~~~~~~~-----------------~~~~~~~~~i~~Dl~d~~~  114 (286)
                      ...+++|||||++.||.+  +++.|.++|++|+++.|+......                 ......+..+.+|++|.++
T Consensus        58 ~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd~~~  137 (418)
T 4eue_A           58 RGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFSNET  137 (418)
T ss_dssp             CCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTCHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCCCHHH
Confidence            347899999999999999  999999999999999997644210                 1123468899999999988


Q ss_pred             HHHHhc-------CCCEEEEccccC---------------CC-------------------------c----chhhhhhh
Q 023205          115 WKEALD-------GVTAVISCVGGF---------------GS-------------------------N----SYMYKING  143 (286)
Q Consensus       115 ~~~~~~-------~~d~vi~~a~~~---------------~~-------------------------~----~~~~~~~~  143 (286)
                      ++++++       .+|++|||||..               .+                         .    ...++++.
T Consensus       138 v~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~~~vn~  217 (418)
T 4eue_A          138 KDKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEIEETRKVMG  217 (418)
T ss_dssp             HHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHHhh
Confidence            877664       579999999863               00                         0    01223443


Q ss_pred             HHHH-HHHHHHHHcCC----CEEEEEecCCcCCCCccc--cchHHHHHHHHHHHHH------h-CCCcEEEEeeCeeecC
Q 023205          144 TANI-NAIRAASEKGV----KRFVYISAADFGVANYLL--QGYYEGKRAAETELLT------R-YPYGGVILRPGFIYGT  209 (286)
Q Consensus       144 ~~~~-~l~~~a~~~~v----~~~v~~Ss~~~~~~~~~~--~~y~~sK~~~E~~~~~------~-~g~~~~ilRp~~v~g~  209 (286)
                      .+.. .+++++...+.    .++|++||.......+..  ..|+.+|...+.+.+.      . .|++++++.||.+-.+
T Consensus       218 ~~~~~~~~~~l~~~~~~~~gg~IV~iSSi~~~~~~p~~~~~aY~ASKaAL~~ltrsLA~ELa~~~GIrVN~V~PG~v~T~  297 (418)
T 4eue_A          218 GEDWQEWCEELLYEDCFSDKATTIAYSYIGSPRTYKIYREGTIGIAKKDLEDKAKLINEKLNRVIGGRAFVSVNKALVTK  297 (418)
T ss_dssp             SHHHHHHHHHHHHTTCEEEEEEEEEEECCCCGGGTTTTTTSHHHHHHHHHHHHHHHHHHHHHHHHSCEEEEEECCCCCCH
T ss_pred             HHHHHHHHHHHHHHhhhcCCcEEEEEeCchhcCCCCccccHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEECCcCcCh
Confidence            3333 44555444332    379999995322222223  6799999999986652      5 7899999999998644

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.51  E-value=5.2e-14  Score=130.48  Aligned_cols=194  Identities=15%  Similarity=0.125  Sum_probs=127.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCC---------Cccc---ccccCCceeEEeccCCCHhHHHHH-----
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSG---------RSSL---RDSWANNVIWHQGNLLSSDSWKEA-----  118 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~---------~~~~---~~~~~~~~~~i~~Dl~d~~~~~~~-----  118 (286)
                      .++++||||++.||+++++.|+++|++|++.+|+.         +...   .+....+.+. .+|+.|.++++++     
T Consensus         8 gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~~-~~d~~d~~~~~~~v~~~~   86 (604)
T 2et6_A            8 DKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVA-VADYNNVLDGDKIVETAV   86 (604)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTTCEE-EEECCCTTCHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCCeE-EEEcCCHHHHHHHHHHHH
Confidence            57899999999999999999999999999998764         1110   0111111122 2466665443333     


Q ss_pred             --hcCCCEEEEccccCCC----------cchhhhhhhHHHHHHHHHHH----HcCCCEEEEEecCCcCCCCccccchHHH
Q 023205          119 --LDGVTAVISCVGGFGS----------NSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEG  182 (286)
Q Consensus       119 --~~~~d~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~----~~~v~~~v~~Ss~~~~~~~~~~~~y~~s  182 (286)
                        +..+|++|||||....          +...+++|+.++..+.+++.    +.+-.+||++||...-........|+.+
T Consensus        87 ~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~ag~~~~~~~~~Y~as  166 (604)
T 2et6_A           87 KNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLYGNFGQANYASA  166 (604)
T ss_dssp             HHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTBHHHHHH
T ss_pred             HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCCCCchHHHHH
Confidence              3468999999996421          23567899999998877764    3344589999994211122335679999


Q ss_pred             HHHHHHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHH
Q 023205          183 KRAAETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVA  256 (286)
Q Consensus       183 K~~~E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva  256 (286)
                      |...+.+.+.      ..|+++++|.|+ +.    + .+              ....     .+   +........+|+|
T Consensus       167 Kaal~~lt~~la~El~~~gIrVn~v~Pg-~~----T-~m--------------~~~~-----~~---~~~~~~~~pe~vA  218 (604)
T 2et6_A          167 KSALLGFAETLAKEGAKYNIKANAIAPL-AR----S-RM--------------TESI-----MP---PPMLEKLGPEKVA  218 (604)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEEC-CC----C-HH--------------HHTT-----SC---HHHHTTCSHHHHH
T ss_pred             HHHHHHHHHHHHHHhCccCeEEEEEccC-Cc----C-cc--------------cccc-----CC---hhhhccCCHHHHH
Confidence            9999886642      578999999996 21    1 10              0000     00   0011235889999


Q ss_pred             HHHHHHhcCCC-CCCCeeEeccc
Q 023205          257 KVAVRAATDPV-FPPGIVDVHGI  278 (286)
Q Consensus       257 ~~~~~~l~~~~-~~~~~~~l~~~  278 (286)
                      .+++.++.... ..|+++.+.|+
T Consensus       219 ~~v~~L~s~~~~itG~~~~vdgG  241 (604)
T 2et6_A          219 PLVLYLSSAENELTGQFFEVAAG  241 (604)
T ss_dssp             HHHHHHTSSSCCCCSCEEEEETT
T ss_pred             HHHHHHhCCcccCCCCEEEECCC
Confidence            99999987643 35788888876

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=99.43  E-value=5.1e-13  Score=97.27  Aligned_cols=96  Identities=21%  Similarity=0.132  Sum_probs=78.5

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCC-CeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccccCC
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRG-LTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFG  133 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g-~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~~~  133 (286)
                      ++++|+|+|+ |++|+.+++.|++.| ++|++++|++++.. .....++.++.+|+.+.+.+.++++++|+|||+++.. 
T Consensus         4 ~~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~-~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~~~~~-   80 (118)
T 3ic5_A            4 MRWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALA-VLNRMGVATKQVDAKDEAGLAKALGGFDAVISAAPFF-   80 (118)
T ss_dssp             TCEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHH-HHHTTTCEEEECCTTCHHHHHHHTTTCSEEEECSCGG-
T ss_pred             CcCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHH-HHHhCCCcEEEecCCCHHHHHHHHcCCCEEEECCCch-
Confidence            4679999999 999999999999999 99999999865422 1224578899999999999999999999999998531 


Q ss_pred             CcchhhhhhhHHHHHHHHHHHHcCCCEEEEE
Q 023205          134 SNSYMYKINGTANINAIRAASEKGVKRFVYI  164 (286)
Q Consensus       134 ~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~  164 (286)
                                 ...++++.+.+.++++|.+.
T Consensus        81 -----------~~~~~~~~~~~~g~~~~~~~  100 (118)
T 3ic5_A           81 -----------LTPIIAKAAKAAGAHYFDLT  100 (118)
T ss_dssp             -----------GHHHHHHHHHHTTCEEECCC
T ss_pred             -----------hhHHHHHHHHHhCCCEEEec
Confidence                       23577889999998655543

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.23  E-value=7e-11  Score=124.28  Aligned_cols=153  Identities=22%  Similarity=0.155  Sum_probs=114.7

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCe-EEEEecCCCccc------cc--ccCCceeEEeccCCCHhHHHHHhc-----
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLT-VASLSRSGRSSL------RD--SWANNVIWHQGNLLSSDSWKEALD-----  120 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~-V~~l~R~~~~~~------~~--~~~~~~~~i~~Dl~d~~~~~~~~~-----  120 (286)
                      ..++++||||+|.||..+++.|+++|++ |++++|+..+..      .+  ....++.++.+|++|.++++++++     
T Consensus      1883 ~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~ 1962 (2512)
T 2vz8_A         1883 PHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQGVQVLVSTSNASSLDGARSLITEATQL 1962 (2512)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHTTCEEEEECCCSSSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhCCCEEEEEecCCCCHHHHHHHHHHHHhc
Confidence            4678999999999999999999999986 788888865421      01  123468889999999998887764     


Q ss_pred             -CCCEEEEccccCC----------CcchhhhhhhHHHHHHHHHHHHc--CCCEEEEEecCCcCCCCccccchHHHHHHHH
Q 023205          121 -GVTAVISCVGGFG----------SNSYMYKINGTANINAIRAASEK--GVKRFVYISAADFGVANYLLQGYYEGKRAAE  187 (286)
Q Consensus       121 -~~d~vi~~a~~~~----------~~~~~~~~~~~~~~~l~~~a~~~--~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E  187 (286)
                       .+|+||||||...          .....+++|+.|+.++.+++...  ...+||++||............|+.+|...+
T Consensus      1963 g~id~lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~g~iV~iSS~ag~~g~~g~~~Y~aaKaal~ 2042 (2512)
T 2vz8_A         1963 GPVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPELDYFVIFSSVSCGRGNAGQANYGFANSAME 2042 (2512)
T ss_dssp             SCEEEEEECCCC----------------CTTTTHHHHHHHHHHHHHHCTTCCEEEEECCHHHHTTCTTCHHHHHHHHHHH
T ss_pred             CCCcEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCEEEEecchhhcCCCCCcHHHHHHHHHHH
Confidence             5799999999642          23466799999999998887654  2369999999532222234567999999999


Q ss_pred             HHHH--HhCCCcEEEEeeCeee
Q 023205          188 TELL--TRYPYGGVILRPGFIY  207 (286)
Q Consensus       188 ~~~~--~~~g~~~~ilRp~~v~  207 (286)
                      .+.+  ...|++...+..|.+-
T Consensus      2043 ~l~~~rr~~Gl~~~a~~~g~~~ 2064 (2512)
T 2vz8_A         2043 RICEKRRHDGLPGLAVQWGAIG 2064 (2512)
T ss_dssp             HHHHHHHHTTSCCCEEEECCBC
T ss_pred             HHHHHHHHCCCcEEEEEccCcC
Confidence            9776  3578888888887664

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=99.12  E-value=1.7e-09  Score=114.20  Aligned_cols=155  Identities=17%  Similarity=0.105  Sum_probs=106.9

Q ss_pred             CCCCeEEEEcCCCh-hHHHHHHHHHHCCCeEEEEecCCCcc-----c---cc--ccCCceeEEeccCCCHhHHHHHhc--
Q 023205           54 PPSEKLLVLGGNGF-VGSHICREALDRGLTVASLSRSGRSS-----L---RD--SWANNVIWHQGNLLSSDSWKEALD--  120 (286)
Q Consensus        54 ~~~~~VlVtGatG~-iG~~l~~~Ll~~g~~V~~l~R~~~~~-----~---~~--~~~~~~~~i~~Dl~d~~~~~~~~~--  120 (286)
                      ...|+++||||++. ||.++++.|++.|++|++.+|+.+..     .   .+  ....++..+.+|++|+++++++++  
T Consensus      2134 l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~lv~~i 2213 (3089)
T 3zen_D         2134 XXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSDIDKLVEWV 2213 (3089)
T ss_dssp             CCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHHH
Confidence            35689999999999 99999999999999999999987651     1   01  112357789999999998877642  


Q ss_pred             ---------CCCEEEEcccc----CC-----------Ccchh----hhhhhHHHHHHHHHHHH----cCCC---EEEEEe
Q 023205          121 ---------GVTAVISCVGG----FG-----------SNSYM----YKINGTANINAIRAASE----KGVK---RFVYIS  165 (286)
Q Consensus       121 ---------~~d~vi~~a~~----~~-----------~~~~~----~~~~~~~~~~l~~~a~~----~~v~---~~v~~S  165 (286)
                               ++|++|||||.    ..           .....    +++|..++..+++.+..    .+..   .++..+
T Consensus      2214 ~~~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~~g~~~~ii~~~ 2293 (3089)
T 3zen_D         2214 GTEQTESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAERDIASRLHVVLPG 2293 (3089)
T ss_dssp             TSCCEEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCCEEEEEEE
T ss_pred             HhhhhhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceeEEEEEC
Confidence                     47999999996    11           11122    57778888777766543    2221   333333


Q ss_pred             cCCcCCCCccccchHHHHHHHHHHHHH---h----CCCcEEEEeeCeeecC
Q 023205          166 AADFGVANYLLQGYYEGKRAAETELLT---R----YPYGGVILRPGFIYGT  209 (286)
Q Consensus       166 s~~~~~~~~~~~~y~~sK~~~E~~~~~---~----~g~~~~ilRp~~v~g~  209 (286)
                      |...+.. .....|+.+|...+.+.+.   .    .+++++.+.||++-+.
T Consensus      2294 ss~~g~~-g~~~aYsASKaAl~~LtrslA~E~~~a~~IrVn~v~PG~v~tT 2343 (3089)
T 3zen_D         2294 SPNRGMF-GGDGAYGEAKSALDALENRWSAEKSWAERVSLAHALIGWTKGT 2343 (3089)
T ss_dssp             CSSTTSC-SSCSSHHHHGGGHHHHHHHHHHCSTTTTTEEEEEEECCCEECS
T ss_pred             CcccccC-CCchHHHHHHHHHHHHHHHHHhccccCCCeEEEEEeecccCCC
Confidence            3322221 1234799999998886642   2    3588899999998744

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=99.11  E-value=2.1e-10  Score=98.41  Aligned_cols=109  Identities=16%  Similarity=0.177  Sum_probs=81.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCC--CeEEEEecCCCcccc-ccc--CCceeEEeccCCCHhHHHHHhcCCCEEEEccc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRG--LTVASLSRSGRSSLR-DSW--ANNVIWHQGNLLSSDSWKEALDGVTAVISCVG  130 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g--~~V~~l~R~~~~~~~-~~~--~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~  130 (286)
                      +++|+||||+|++|..++..|+.+|  ++|++++++++.... +..  .....+ .+ +.+.+++.++++++|+|||+++
T Consensus         8 ~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~~~~~~dL~~~~~~~~v-~~-~~~t~d~~~al~gaDvVi~~ag   85 (326)
T 1smk_A            8 GFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNAPGVTADISHMDTGAVV-RG-FLGQQQLEAALTGMDLIIVPAG   85 (326)
T ss_dssp             CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSHHHHHHHHHTSCSSCEE-EE-EESHHHHHHHHTTCSEEEECCC
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCcHhHHHHhhcccccceE-EE-EeCCCCHHHHcCCCCEEEEcCC
Confidence            5699999999999999999999998  789999877642100 000  111111 11 2335678889999999999998


Q ss_pred             cCCC----cchhhhhhhHHHHHHHHHHHHcCCCEEEEEec
Q 023205          131 GFGS----NSYMYKINGTANINAIRAASEKGVKRFVYISA  166 (286)
Q Consensus       131 ~~~~----~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss  166 (286)
                      ....    .......|+.++.++++.+++.+.+.+|+++|
T Consensus        86 ~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~~p~~~viv~S  125 (326)
T 1smk_A           86 VPRKPGMTRDDLFKINAGIVKTLCEGIAKCCPRAIVNLIS  125 (326)
T ss_dssp             CCCCSSCCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEECC
T ss_pred             cCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEEC
Confidence            6532    24567899999999999999998888888887

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=99.06  E-value=1.4e-10  Score=99.68  Aligned_cols=155  Identities=6%  Similarity=-0.028  Sum_probs=103.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC-------eEEEEecC----CCcccc---cccCCceeEEeccCCCHhHHHHHhcC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGL-------TVASLSRS----GRSSLR---DSWANNVIWHQGNLLSSDSWKEALDG  121 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~-------~V~~l~R~----~~~~~~---~~~~~~~~~i~~Dl~d~~~~~~~~~~  121 (286)
                      ++||+||||+|++|++++..|+.++.       +|++++++    .++...   ........+ ..|+...+++.+++++
T Consensus         5 ~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~-~~~i~~~~~~~~al~~   83 (329)
T 1b8p_A            5 PMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPL-LAGMTAHADPMTAFKD   83 (329)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTT-EEEEEEESSHHHHTTT
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhcccc-cCcEEEecCcHHHhCC
Confidence            46899999999999999999999885       78888877    221100   000100111 2355555667889999


Q ss_pred             CCEEEEccccCCCc----chhhhhhhHHHHHHHHHHHHcC-CC-EEEEEecCC---------cCCCCccccchHHHHHHH
Q 023205          122 VTAVISCVGGFGSN----SYMYKINGTANINAIRAASEKG-VK-RFVYISAAD---------FGVANYLLQGYYEGKRAA  186 (286)
Q Consensus       122 ~d~vi~~a~~~~~~----~~~~~~~~~~~~~l~~~a~~~~-v~-~~v~~Ss~~---------~~~~~~~~~~y~~sK~~~  186 (286)
                      +|+|||+||....+    ...+..|+.++.++++.+++.+ .+ +||++|...         +...-++...++.++...
T Consensus        84 aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SNPv~~~t~~~~~~~~~~p~~~v~g~t~Ld~  163 (329)
T 1b8p_A           84 ADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGNPANTNAYIAMKSAPSLPAKNFTAMLRLDH  163 (329)
T ss_dssp             CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHHHHTCTTSCGGGEEECCHHHH
T ss_pred             CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccCchHHHHHHHHHHcCCCCHHHEEEeecHHH
Confidence            99999999865322    3556889999999999999984 66 888888631         110001223466666554


Q ss_pred             HH---HHHHhCCCcEEEEeeCeeecCCC
Q 023205          187 ET---ELLTRYPYGGVILRPGFIYGTRT  211 (286)
Q Consensus       187 E~---~~~~~~g~~~~ilRp~~v~g~~~  211 (286)
                      .+   .+.+..|++..-++...++|...
T Consensus       164 ~r~~~~la~~lgv~~~~v~~~~v~G~Hg  191 (329)
T 1b8p_A          164 NRALSQIAAKTGKPVSSIEKLFVWGNHS  191 (329)
T ss_dssp             HHHHHHHHHHHTCCGGGEESCEEEBCSS
T ss_pred             HHHHHHHHHHhCcCHHHceEEEEEeccC
Confidence            44   23345777777788777788653

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=99.02  E-value=2.5e-09  Score=80.17  Aligned_cols=99  Identities=14%  Similarity=0.099  Sum_probs=74.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHH-hcCCCEEEEccccCCC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEA-LDGVTAVISCVGGFGS  134 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~-~~~~d~vi~~a~~~~~  134 (286)
                      +++|+|+|+ |.+|+.+++.|.+.|++|++++|+++... .....+..++.+|..+.+.+.++ ++++|+||++++..  
T Consensus         6 ~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~-~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~--   81 (144)
T 2hmt_A            6 NKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVN-AYASYATHAVIANATEENELLSLGIRNFEYVIVAIGAN--   81 (144)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHH-TTTTTCSEEEECCTTCHHHHHTTTGGGCSEEEECCCSC--
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHhCCEEEEeCCCCHHHHHhcCCCCCCEEEECCCCc--
Confidence            568999998 99999999999999999999999764421 12223567788999998888876 78899999998641  


Q ss_pred             cchhhhhhhHHHHHHHHHHHHcCCCEEEEEec
Q 023205          135 NSYMYKINGTANINAIRAASEKGVKRFVYISA  166 (286)
Q Consensus       135 ~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss  166 (286)
                          .+    ....+++.+++.++++++..++
T Consensus        82 ----~~----~~~~~~~~~~~~~~~~ii~~~~  105 (144)
T 2hmt_A           82 ----IQ----ASTLTTLLLKELDIPNIWVKAQ  105 (144)
T ss_dssp             ----HH----HHHHHHHHHHHTTCSEEEEECC
T ss_pred             ----hH----HHHHHHHHHHHcCCCeEEEEeC
Confidence                01    1224566777788877776555

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=98.89  E-value=7.5e-09  Score=77.59  Aligned_cols=97  Identities=15%  Similarity=0.137  Sum_probs=71.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHH-hcCCCEEEEccccCCC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEA-LDGVTAVISCVGGFGS  134 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~-~~~~d~vi~~a~~~~~  134 (286)
                      +++|+|+|+ |.+|+++++.|.++|++|++++++++... .....++.++.+|.++++.+.++ ++++|+||.+.+.   
T Consensus         6 ~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~-~~~~~~~~~~~gd~~~~~~l~~~~~~~~d~vi~~~~~---   80 (141)
T 3llv_A            6 RYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKIE-LLEDEGFDAVIADPTDESFYRSLDLEGVSAVLITGSD---   80 (141)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHH-HHHHTTCEEEECCTTCHHHHHHSCCTTCSEEEECCSC---
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHH-HHHHCCCcEEECCCCCHHHHHhCCcccCCEEEEecCC---
Confidence            568999998 99999999999999999999999865421 12224688999999999988876 5689999988652   


Q ss_pred             cchhhhhhhHHHHHHHHHHHHcCCCEEEEEe
Q 023205          135 NSYMYKINGTANINAIRAASEKGVKRFVYIS  165 (286)
Q Consensus       135 ~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~S  165 (286)
                      .        .....++..+++.+..+++-..
T Consensus        81 ~--------~~n~~~~~~a~~~~~~~iia~~  103 (141)
T 3llv_A           81 D--------EFNLKILKALRSVSDVYAIVRV  103 (141)
T ss_dssp             H--------HHHHHHHHHHHHHCCCCEEEEE
T ss_pred             H--------HHHHHHHHHHHHhCCceEEEEE
Confidence            1        1223445666666654554433

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=98.89  E-value=5.3e-09  Score=89.22  Aligned_cols=105  Identities=16%  Similarity=0.103  Sum_probs=75.5

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCC--eEEEEec--CCCccc------ccc--cC-CceeEEeccCCCHhHHHHHhcCCC
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGL--TVASLSR--SGRSSL------RDS--WA-NNVIWHQGNLLSSDSWKEALDGVT  123 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~--~V~~l~R--~~~~~~------~~~--~~-~~~~~i~~Dl~d~~~~~~~~~~~d  123 (286)
                      |||+||||+|++|++++..|+.++.  ++.++++  +.++..      ...  .. ..+++...+    +++.++++++|
T Consensus         1 mKI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~----d~l~~al~gaD   76 (313)
T 1hye_A            1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVES----DENLRIIDESD   76 (313)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEE----TTCGGGGTTCS
T ss_pred             CEEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeCC----cchHHHhCCCC
Confidence            4899999999999999999998874  5777777  432110      000  00 122322211    23567899999


Q ss_pred             EEEEccccCCCc----chhhhhhhHHHHHHHHHHHHcCCCEEEEEec
Q 023205          124 AVISCVGGFGSN----SYMYKINGTANINAIRAASEKGVKRFVYISA  166 (286)
Q Consensus       124 ~vi~~a~~~~~~----~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss  166 (286)
                      +|||+||....+    ...+..|+.++.++++++++.+ +.+|+++|
T Consensus        77 ~Vi~~Ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~-~~~vlv~S  122 (313)
T 1hye_A           77 VVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEIC-DTKIFVIT  122 (313)
T ss_dssp             EEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-CCEEEECS
T ss_pred             EEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEec
Confidence            999999865322    3567899999999999999999 88888888

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=98.87  E-value=1e-09  Score=93.19  Aligned_cols=147  Identities=15%  Similarity=0.108  Sum_probs=93.2

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCC--eEEEEec--CCCcccc------cc--cCCceeEEeccCCCHhHHHHHhcCCCE
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGL--TVASLSR--SGRSSLR------DS--WANNVIWHQGNLLSSDSWKEALDGVTA  124 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~--~V~~l~R--~~~~~~~------~~--~~~~~~~i~~Dl~d~~~~~~~~~~~d~  124 (286)
                      |||+||||+|++|.+++..|+.++.  ++.++++  +.++...      ..  ...++++.. +  +    .++++++|+
T Consensus         1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~-~--~----~~a~~~aDv   73 (303)
T 1o6z_A            1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQ-G--G----YEDTAGSDV   73 (303)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEE-C--C----GGGGTTCSE
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEe-C--C----HHHhCCCCE
Confidence            5899999999999999999999875  6777777  4322100      00  112333332 1  2    356889999


Q ss_pred             EEEccccCCCc----chhhhhhhHHHHHHHHHHHHcCCCEEEEEecC--C--------c-CCCCccccchH-H-HHHHHH
Q 023205          125 VISCVGGFGSN----SYMYKINGTANINAIRAASEKGVKRFVYISAA--D--------F-GVANYLLQGYY-E-GKRAAE  187 (286)
Q Consensus       125 vi~~a~~~~~~----~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~--~--------~-~~~~~~~~~y~-~-sK~~~E  187 (286)
                      |||+|+....+    ...+..|+.++.++++++++.+.+.+|+++|-  .        + +.+.....+.+ . .-....
T Consensus        74 Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~p~~~viv~SNPv~~~~~~~~~~~~~p~~rviG~gt~Ld~~r~~  153 (303)
T 1o6z_A           74 VVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTSNPVDLLNRHLYEAGDRSREQVIGFGGRLDSARFR  153 (303)
T ss_dssp             EEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECCSSHHHHHHHHHHHSSSCGGGEEECCHHHHHHHHH
T ss_pred             EEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHcCCCHHHeeecccchhHHHHH
Confidence            99999865432    35668999999999999999988888888872  0        0 11111111221 1 122333


Q ss_pred             HHHHHhCCCcEEEEeeCeeecCCC
Q 023205          188 TELLTRYPYGGVILRPGFIYGTRT  211 (286)
Q Consensus       188 ~~~~~~~g~~~~ilRp~~v~g~~~  211 (286)
                      ..+.+..|++..-++ ..++|...
T Consensus       154 ~~la~~l~v~~~~v~-~~v~G~HG  176 (303)
T 1o6z_A          154 YVLSEEFDAPVQNVE-GTILGEHG  176 (303)
T ss_dssp             HHHHHHHTCCGGGEE-CCEEECSS
T ss_pred             HHHHHHhCcCHHHeE-EEEEeCCC
Confidence            444455666666666 67778543

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=98.86  E-value=8.2e-09  Score=92.30  Aligned_cols=103  Identities=18%  Similarity=0.163  Sum_probs=76.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccc-cCCceeEEeccCCCHhHHHHHhcCCCEEEEccccCCC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDS-WANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFGS  134 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~-~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~~~~  134 (286)
                      +++|+|+| +|++|+++++.|++.|++|++++|+.++..... ...++..+.+|+.|.+++.++++++|+||||++....
T Consensus         3 ~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~~~~~~~~~Dv~d~~~l~~~l~~~DvVIn~a~~~~~   81 (450)
T 1ff9_A            3 TKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISLIPYTFH   81 (450)
T ss_dssp             CCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTCTTEEEEECCTTCHHHHHHHHTTSSEEEECCC--CH
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhcCCceEEEeecCCHHHHHHHHcCCcEEEECCccccc
Confidence            46899998 799999999999999999999999865422111 1124778899999999999999999999999986432


Q ss_pred             cc---hhhh--hh-------hHHHHHHHHHHHHcCCC
Q 023205          135 NS---YMYK--IN-------GTANINAIRAASEKGVK  159 (286)
Q Consensus       135 ~~---~~~~--~~-------~~~~~~l~~~a~~~~v~  159 (286)
                      ..   ..++  .+       .....+++++|+++|++
T Consensus        82 ~~i~~a~l~~g~~vvd~~~~~~~~~~l~~aA~~aGv~  118 (450)
T 1ff9_A           82 ATVIKSAIRQKKHVVTTSYVSPAMMELDQAAKDAGIT  118 (450)
T ss_dssp             HHHHHHHHHHTCEEEESSCCCHHHHHTHHHHHHTTCE
T ss_pred             hHHHHHHHhCCCeEEEeecccHHHHHHHHHHHHCCCe
Confidence            11   1111  11       23567889999999874

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=98.85  E-value=1.8e-09  Score=91.04  Aligned_cols=77  Identities=23%  Similarity=0.176  Sum_probs=63.5

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc--ccc--CCceeEEeccCCCHhHHHHHhcCCCEEEEccc
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSW--ANNVIWHQGNLLSSDSWKEALDGVTAVISCVG  130 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~--~~~--~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~  130 (286)
                      ..++++||||+|++|+++++.|++.|++|++++|+.++...  +..  ..++.++.+|++|.+++.++++++|+||||++
T Consensus       118 ~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~DvlVn~ag  197 (287)
T 1lu9_A          118 KGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKGAHFVFTAGA  197 (287)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTCSEEEECCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHhCCEEEECCC
Confidence            45799999999999999999999999999999998644211  000  02467788999999999999999999999997


Q ss_pred             c
Q 023205          131 G  131 (286)
Q Consensus       131 ~  131 (286)
                      .
T Consensus       198 ~  198 (287)
T 1lu9_A          198 I  198 (287)
T ss_dssp             T
T ss_pred             c
Confidence            5

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=98.84  E-value=1.8e-08  Score=75.07  Aligned_cols=99  Identities=13%  Similarity=0.214  Sum_probs=71.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHH-hcCCCEEEEccccCCC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEA-LDGVTAVISCVGGFGS  134 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~-~~~~d~vi~~a~~~~~  134 (286)
                      .|+|+|+|+ |.+|..+++.|.+.|++|++++|+++.........++.++.+|..+.+.+.+. ++++|+||++.+..  
T Consensus         4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~--   80 (140)
T 1lss_A            4 GMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVTGKE--   80 (140)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECCSCH--
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhcCcEEEEcCCCCHHHHHHcCcccCCEEEEeeCCc--
Confidence            368999997 99999999999999999999999765421111112567889999998887755 67899999996431  


Q ss_pred             cchhhhhhhHHHHHHHHHHHHcCCCEEEEEec
Q 023205          135 NSYMYKINGTANINAIRAASEKGVKRFVYISA  166 (286)
Q Consensus       135 ~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss  166 (286)
                           ..+    ..+.+.++..+.+++|..++
T Consensus        81 -----~~~----~~~~~~~~~~~~~~ii~~~~  103 (140)
T 1lss_A           81 -----EVN----LMSSLLAKSYGINKTIARIS  103 (140)
T ss_dssp             -----HHH----HHHHHHHHHTTCCCEEEECS
T ss_pred             -----hHH----HHHHHHHHHcCCCEEEEEec
Confidence                 111    24456677777777775443

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=98.75  E-value=2.3e-07  Score=70.58  Aligned_cols=98  Identities=16%  Similarity=0.126  Sum_probs=72.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCccccccc-CCceeEEeccCCCHhHHHHH-hcCCCEEEEccccCC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSW-ANNVIWHQGNLLSSDSWKEA-LDGVTAVISCVGGFG  133 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~-~~~~~~i~~Dl~d~~~~~~~-~~~~d~vi~~a~~~~  133 (286)
                      .++|+|+|+ |.+|..+++.|.+.|++|++++|+++... ... ..++.++.+|..+.+.+.++ ++++|+||.+.+.. 
T Consensus        19 ~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~-~~~~~~g~~~~~~d~~~~~~l~~~~~~~ad~Vi~~~~~~-   95 (155)
T 2g1u_A           19 SKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFH-RLNSEFSGFTVVGDAAEFETLKECGMEKADMVFAFTNDD-   95 (155)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGG-GSCTTCCSEEEESCTTSHHHHHTTTGGGCSEEEECSSCH-
T ss_pred             CCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHH-HHHhcCCCcEEEecCCCHHHHHHcCcccCCEEEEEeCCc-
Confidence            568999996 99999999999999999999999876532 222 34677888999888877766 78899999997541 


Q ss_pred             CcchhhhhhhHHHHHHHHHHHH-cCCCEEEEEec
Q 023205          134 SNSYMYKINGTANINAIRAASE-KGVKRFVYISA  166 (286)
Q Consensus       134 ~~~~~~~~~~~~~~~l~~~a~~-~~v~~~v~~Ss  166 (286)
                                .....+++.++. .+..+++...+
T Consensus        96 ----------~~~~~~~~~~~~~~~~~~iv~~~~  119 (155)
T 2g1u_A           96 ----------STNFFISMNARYMFNVENVIARVY  119 (155)
T ss_dssp             ----------HHHHHHHHHHHHTSCCSEEEEECS
T ss_pred             ----------HHHHHHHHHHHHHCCCCeEEEEEC
Confidence                      112244556666 56656665554

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=98.74  E-value=7.2e-08  Score=73.29  Aligned_cols=75  Identities=19%  Similarity=0.254  Sum_probs=61.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCc---ccccccCCceeEEeccCCCHhHHHHH-hcCCCEEEEcccc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRS---SLRDSWANNVIWHQGNLLSSDSWKEA-LDGVTAVISCVGG  131 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~---~~~~~~~~~~~~i~~Dl~d~~~~~~~-~~~~d~vi~~a~~  131 (286)
                      .++|+|+|+ |.+|+++++.|.+.|++|++++|++..   ........++.++.+|.++++.+.++ ++++|.||.+.+.
T Consensus         3 ~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~   81 (153)
T 1id1_A            3 KDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALSDN   81 (153)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEECSSC
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhcCCCeEEEcCCCCHHHHHHcChhhCCEEEEecCC
Confidence            357999996 999999999999999999999997532   11122245789999999999999887 8999999988643

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=98.73  E-value=2.1e-08  Score=88.61  Aligned_cols=91  Identities=15%  Similarity=0.154  Sum_probs=70.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCC---CeEEEEecCCCcccc--ccc----CCceeEEeccCCCHhHHHHHhcC--CCE
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRG---LTVASLSRSGRSSLR--DSW----ANNVIWHQGNLLSSDSWKEALDG--VTA  124 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g---~~V~~l~R~~~~~~~--~~~----~~~~~~i~~Dl~d~~~~~~~~~~--~d~  124 (286)
                      |++|+|+|| |++|+.+++.|++.|   .+|.+.+|+.++...  ...    ..++..+.+|++|.+++++++++  +|+
T Consensus         1 M~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~~~Dv   79 (405)
T 4ina_A            1 MAKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEVKPQI   79 (405)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhhCCCE
Confidence            468999999 999999999999998   389999998655221  111    13688999999999999999987  899


Q ss_pred             EEEccccCCCcchhhhhhhHHHHHHHHHHHHcCCC
Q 023205          125 VISCVGGFGSNSYMYKINGTANINAIRAASEKGVK  159 (286)
Q Consensus       125 vi~~a~~~~~~~~~~~~~~~~~~~l~~~a~~~~v~  159 (286)
                      ||||+++..            ...++++|.+.++.
T Consensus        80 Vin~ag~~~------------~~~v~~a~l~~g~~  102 (405)
T 4ina_A           80 VLNIALPYQ------------DLTIMEACLRTGVP  102 (405)
T ss_dssp             EEECSCGGG------------HHHHHHHHHHHTCC
T ss_pred             EEECCCccc------------ChHHHHHHHHhCCC
Confidence            999998631            13556777777764

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=98.71  E-value=5.5e-08  Score=84.78  Aligned_cols=93  Identities=23%  Similarity=0.232  Sum_probs=72.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccccCCCc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFGSN  135 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~~~~~  135 (286)
                      .|||+|.|| |++|+.+++.|.+ .++|.+.+|+.++..  ...+.+..+..|+.|.+++.++++++|+||+++++.-  
T Consensus        16 ~mkilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~--~~~~~~~~~~~d~~d~~~l~~~~~~~DvVi~~~p~~~--   89 (365)
T 3abi_A           16 HMKVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLE--KVKEFATPLKVDASNFDKLVEVMKEFELVIGALPGFL--   89 (365)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHH--HHTTTSEEEECCTTCHHHHHHHHTTCSEEEECCCGGG--
T ss_pred             ccEEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHH--HHhccCCcEEEecCCHHHHHHHHhCCCEEEEecCCcc--
Confidence            468999998 9999999988865 589999998765421  1235677889999999999999999999999987641  


Q ss_pred             chhhhhhhHHHHHHHHHHHHcCCCEEEEEe
Q 023205          136 SYMYKINGTANINAIRAASEKGVKRFVYIS  165 (286)
Q Consensus       136 ~~~~~~~~~~~~~l~~~a~~~~v~~~v~~S  165 (286)
                                ...++++|.++|+ +++=+|
T Consensus        90 ----------~~~v~~~~~~~g~-~yvD~s  108 (365)
T 3abi_A           90 ----------GFKSIKAAIKSKV-DMVDVS  108 (365)
T ss_dssp             ----------HHHHHHHHHHHTC-EEEECC
T ss_pred             ----------cchHHHHHHhcCc-ceEeee
Confidence                      1256777877776 555444

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=98.68  E-value=1.9e-08  Score=90.17  Aligned_cols=102  Identities=14%  Similarity=0.090  Sum_probs=75.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHC-CCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccccCCC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDR-GLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFGS  134 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~-g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~~~~  134 (286)
                      +++|+|+|+ |++|+.+++.|++. +++|++++|+.++........++.++.+|+.|.+++.++++++|+|||+++....
T Consensus        23 ~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~~~~~~~~~D~~d~~~l~~~l~~~DvVIn~tp~~~~  101 (467)
T 2axq_A           23 GKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAKPSGSKAISLDVTDDSALDKVLADNDVVISLIPYTFH  101 (467)
T ss_dssp             CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGGGTCEEEECCTTCHHHHHHHHHTSSEEEECSCGGGH
T ss_pred             CCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhcCCcEEEEecCCHHHHHHHHcCCCEEEECCchhhh
Confidence            568999997 99999999999998 6899999998654221111135778889999999999999999999999986421


Q ss_pred             c----------chhhhhhh--HHHHHHHHHHHHcCC
Q 023205          135 N----------SYMYKING--TANINAIRAASEKGV  158 (286)
Q Consensus       135 ~----------~~~~~~~~--~~~~~l~~~a~~~~v  158 (286)
                      .          ...+.++.  ....++++.|+++|+
T Consensus       102 ~~v~~a~l~~g~~vvd~~~~~p~~~~Ll~~Ak~aGv  137 (467)
T 2axq_A          102 PNVVKSAIRTKTDVVTSSYISPALRELEPEIVKAGI  137 (467)
T ss_dssp             HHHHHHHHHHTCEEEECSCCCHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHhcCCEEEEeecCCHHHHHHHHHHHHcCC
Confidence            1          01112221  334677888888886

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=98.66  E-value=4.6e-07  Score=78.21  Aligned_cols=78  Identities=14%  Similarity=0.104  Sum_probs=62.0

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHH-HCCCeEEEEecCCCcccc-----------------cccCCceeEEeccCCCHhHHH
Q 023205           55 PSEKLLVLGGNGFVGSHICREAL-DRGLTVASLSRSGRSSLR-----------------DSWANNVIWHQGNLLSSDSWK  116 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll-~~g~~V~~l~R~~~~~~~-----------------~~~~~~~~~i~~Dl~d~~~~~  116 (286)
                      .+|++|||||+..+|.+.+..|. +.|..|+++.|..+....                 +........+.+|+.|++.++
T Consensus        49 ~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e~i~  128 (401)
T 4ggo_A           49 APKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDEIKA  128 (401)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHHHHH
Confidence            46899999999999999999988 678999999987654221                 111346789999999998888


Q ss_pred             HHhc-------CCCEEEEccccC
Q 023205          117 EALD-------GVTAVISCVGGF  132 (286)
Q Consensus       117 ~~~~-------~~d~vi~~a~~~  132 (286)
                      ++++       ++|+++|+++..
T Consensus       129 ~vi~~i~~~~G~IDiLVhS~A~~  151 (401)
T 4ggo_A          129 QVIEEAKKKGIKFDLIVYSLASP  151 (401)
T ss_dssp             HHHHHHHHTTCCEEEEEECCCCS
T ss_pred             HHHHHHHHhcCCCCEEEEecccc
Confidence            7764       589999999854

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=98.59  E-value=2.7e-07  Score=74.41  Aligned_cols=74  Identities=18%  Similarity=0.247  Sum_probs=55.7

Q ss_pred             CCeEEEEcC----------------CChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhH----H
Q 023205           56 SEKLLVLGG----------------NGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDS----W  115 (286)
Q Consensus        56 ~~~VlVtGa----------------tG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~----~  115 (286)
                      +++||||||                +|.+|.+++++|+++|++|+++.|......  ....++.++.  +...++    +
T Consensus         3 gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~~--~~~~~~~~~~--v~s~~em~~~v   78 (232)
T 2gk4_A            3 AMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALKP--EPHPNLSIRE--ITNTKDLLIEM   78 (232)
T ss_dssp             CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCCC--CCCTTEEEEE--CCSHHHHHHHH
T ss_pred             CCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCccccc--cCCCCeEEEE--HhHHHHHHHHH
Confidence            579999999                999999999999999999999999754211  1123566654  445443    3


Q ss_pred             HHHhcCCCEEEEccccCC
Q 023205          116 KEALDGVTAVISCVGGFG  133 (286)
Q Consensus       116 ~~~~~~~d~vi~~a~~~~  133 (286)
                      .+.+.++|++||+|+..+
T Consensus        79 ~~~~~~~Dili~aAAvsD   96 (232)
T 2gk4_A           79 QERVQDYQVLIHSMAVSD   96 (232)
T ss_dssp             HHHGGGCSEEEECSBCCS
T ss_pred             HHhcCCCCEEEEcCcccc
Confidence            445568999999999754

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=98.51  E-value=3e-07  Score=74.07  Aligned_cols=96  Identities=17%  Similarity=0.191  Sum_probs=70.6

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHH-hcCCCEEEEccccCCCc
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEA-LDGVTAVISCVGGFGSN  135 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~-~~~~d~vi~~a~~~~~~  135 (286)
                      |+|+|+|+ |.+|+++++.|.+.|++|++++++++.........++.++.+|.++++.+.++ ++++|+||.+.+..   
T Consensus         1 M~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d---   76 (218)
T 3l4b_C            1 MKVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKLKATIIHGDGSHKEILRDAEVSKNDVVVILTPRD---   76 (218)
T ss_dssp             CCEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHSSSEEEESCTTSHHHHHHHTCCTTCEEEECCSCH---
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHcCCeEEEcCCCCHHHHHhcCcccCCEEEEecCCc---
Confidence            57999996 99999999999999999999999876532211123678999999999999886 78999999875431   


Q ss_pred             chhhhhhhHHHHHHHHHHHH-cCCCEEEEE
Q 023205          136 SYMYKINGTANINAIRAASE-KGVKRFVYI  164 (286)
Q Consensus       136 ~~~~~~~~~~~~~l~~~a~~-~~v~~~v~~  164 (286)
                          ..    ...+...+++ .+..++|-.
T Consensus        77 ----~~----n~~~~~~a~~~~~~~~iia~   98 (218)
T 3l4b_C           77 ----EV----NLFIAQLVMKDFGVKRVVSL   98 (218)
T ss_dssp             ----HH----HHHHHHHHHHTSCCCEEEEC
T ss_pred             ----HH----HHHHHHHHHHHcCCCeEEEE
Confidence                11    2233455555 566666643

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=98.48  E-value=3.8e-07  Score=77.62  Aligned_cols=105  Identities=16%  Similarity=0.155  Sum_probs=73.8

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCC--CeEEEEecCCCcccc----cccCC-ceeEEeccCCCHhHHHHHhcCCCEEEEcc
Q 023205           57 EKLLVLGGNGFVGSHICREALDRG--LTVASLSRSGRSSLR----DSWAN-NVIWHQGNLLSSDSWKEALDGVTAVISCV  129 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g--~~V~~l~R~~~~~~~----~~~~~-~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a  129 (286)
                      |||.|+||+|++|..++..|+.++  .+|.++++++.....    ....+ +++...+    .++++++++++|+||+++
T Consensus         1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~~~~~a~dL~~~~~~~~l~~~~~----t~d~~~a~~~aDvVvi~a   76 (314)
T 1mld_A            1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVKGYLG----PEQLPDCLKGCDVVVIPA   76 (314)
T ss_dssp             CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTTSSSSCEEEEEES----GGGHHHHHTTCSEEEECC
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCccHHHHHHHhccCcCceEEEecC----CCCHHHHhCCCCEEEECC
Confidence            489999999999999999999888  689999998621110    10011 1222111    245777899999999999


Q ss_pred             ccCCCc----chhhhhhhHHHHHHHHHHHHcCCC-EEEEEe
Q 023205          130 GGFGSN----SYMYKINGTANINAIRAASEKGVK-RFVYIS  165 (286)
Q Consensus       130 ~~~~~~----~~~~~~~~~~~~~l~~~a~~~~v~-~~v~~S  165 (286)
                      |....+    ......|......+++.+++.... .|+++|
T Consensus        77 g~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~s  117 (314)
T 1mld_A           77 GVPRKPGMTRDDLFNTNATIVATLTAACAQHCPDAMICIIS  117 (314)
T ss_dssp             SCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred             CcCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEEC
Confidence            865322    355678888888999998887654 566654

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=98.47  E-value=1.4e-06  Score=70.04  Aligned_cols=73  Identities=16%  Similarity=0.223  Sum_probs=55.3

Q ss_pred             CCCeEEEEcC----------------CChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHH-
Q 023205           55 PSEKLLVLGG----------------NGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKE-  117 (286)
Q Consensus        55 ~~~~VlVtGa----------------tG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~-  117 (286)
                      ..++||||||                +|.+|.+++++|+++|++|+++.|...-..    ..++.  ..|+.+.+++.+ 
T Consensus         7 ~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~l~~----~~g~~--~~dv~~~~~~~~~   80 (226)
T 1u7z_A            7 KHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSLPT----PPFVK--RVDVMTALEMEAA   80 (226)
T ss_dssp             TTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCCCC----CTTEE--EEECCSHHHHHHH
T ss_pred             CCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCccccc----CCCCe--EEccCcHHHHHHH
Confidence            4689999999                799999999999999999999988652211    22444  457777665543 


Q ss_pred             ---HhcCCCEEEEccccCC
Q 023205          118 ---ALDGVTAVISCVGGFG  133 (286)
Q Consensus       118 ---~~~~~d~vi~~a~~~~  133 (286)
                         .+.++|++|||||..+
T Consensus        81 v~~~~~~~Dili~~Aav~d   99 (226)
T 1u7z_A           81 VNASVQQQNIFIGCAAVAD   99 (226)
T ss_dssp             HHHHGGGCSEEEECCBCCS
T ss_pred             HHHhcCCCCEEEECCcccC
Confidence               3457999999999653

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=98.46  E-value=4.1e-07  Score=68.00  Aligned_cols=75  Identities=19%  Similarity=0.175  Sum_probs=61.6

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHH-hcCCCEEEEcccc
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEA-LDGVTAVISCVGG  131 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~-~~~~d~vi~~a~~  131 (286)
                      +.++|+|.|+ |.+|..+++.|.+.|++|++++++++... .....++.++.+|.++++.+.++ ++++|.||.+.+.
T Consensus         6 ~~~~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~-~~~~~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~   81 (140)
T 3fwz_A            6 ICNHALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTRVD-ELRERGVRAVLGNAANEEIMQLAHLECAKWLILTIPN   81 (140)
T ss_dssp             CCSCEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHH-HHHHTTCEEEESCTTSHHHHHHTTGGGCSEEEECCSC
T ss_pred             CCCCEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHHHH-HHHHcCCCEEECCCCCHHHHHhcCcccCCEEEEECCC
Confidence            4568999997 99999999999999999999999876522 22235788999999999988775 6789999988643

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=98.44  E-value=9.3e-08  Score=81.91  Aligned_cols=154  Identities=11%  Similarity=0.061  Sum_probs=94.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC--e-----EEEEecCCCc-cc-------ccccCCceeEEeccCCCHhHHHHHhc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGL--T-----VASLSRSGRS-SL-------RDSWANNVIWHQGNLLSSDSWKEALD  120 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~--~-----V~~l~R~~~~-~~-------~~~~~~~~~~i~~Dl~d~~~~~~~~~  120 (286)
                      +++|+||||+|+||++++..|+..+.  +     +.++++++.. ..       .....+-.    .++.......+.++
T Consensus         3 ~~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~~~----~~~~~~~~~~~~~~   78 (333)
T 5mdh_A            3 PIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLL----KDVIATDKEEIAFK   78 (333)
T ss_dssp             CEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTE----EEEEEESCHHHHTT
T ss_pred             CeEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhhccc----CCEEEcCCcHHHhC
Confidence            46899999999999999999998764  5     8888886421 00       01001111    12222234567899


Q ss_pred             CCCEEEEccccCC----CcchhhhhhhHHHHHHHHHHHHcCCC--EEEEEecCC---------c-C-CCCcccc-chHHH
Q 023205          121 GVTAVISCVGGFG----SNSYMYKINGTANINAIRAASEKGVK--RFVYISAAD---------F-G-VANYLLQ-GYYEG  182 (286)
Q Consensus       121 ~~d~vi~~a~~~~----~~~~~~~~~~~~~~~l~~~a~~~~v~--~~v~~Ss~~---------~-~-~~~~~~~-~y~~s  182 (286)
                      ++|+||++||...    .....++.|.....++++.+++.+.+  +++.+|-..         + + .+..-.. +-...
T Consensus        79 daDvVvitAg~prkpG~tR~dll~~N~~i~~~i~~~i~~~~~~~~~vivvsNPvd~~t~~~~~~~~~~p~~~ig~~t~LD  158 (333)
T 5mdh_A           79 DLDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVGNPANTNCLTASKSAPSIPKENFSCLTRLD  158 (333)
T ss_dssp             TCSEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHHHHTCTTSCGGGEEECCHHH
T ss_pred             CCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCchHHHHHHHHHHcCCCCcCEEEEEEhHH
Confidence            9999999998643    23466789999999999999998875  466665420         1 1 1111111 11111


Q ss_pred             HHHHHHHHHHhCCCcEEEEeeCeeecCCCCC
Q 023205          183 KRAAETELLTRYPYGGVILRPGFIYGTRTVG  213 (286)
Q Consensus       183 K~~~E~~~~~~~g~~~~ilRp~~v~g~~~~~  213 (286)
                      -.....++.+..+++..-++--.++|.....
T Consensus       159 s~R~~~~la~~l~v~~~~v~~~vV~GeHgds  189 (333)
T 5mdh_A          159 HNRAKAQIALKLGVTSDDVKNVIIWGNHSST  189 (333)
T ss_dssp             HHHHHHHHHHHHTCCGGGEECCEEEBCSSTT
T ss_pred             HHHHHHHHHHHhCcCHHHeeecEEEEcCCCC
Confidence            2233344555567776667654567765543

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=98.42  E-value=7.7e-07  Score=69.59  Aligned_cols=95  Identities=16%  Similarity=0.227  Sum_probs=70.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHC-CCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHH--hcCCCEEEEccccC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDR-GLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEA--LDGVTAVISCVGGF  132 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~-g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~--~~~~d~vi~~a~~~  132 (286)
                      .++|+|+|+ |.+|..+++.|.+. |++|++++|+++.... ....++.++.+|.++++.+.++  ++++|+||.+.+..
T Consensus        39 ~~~v~IiG~-G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~-~~~~g~~~~~gd~~~~~~l~~~~~~~~ad~vi~~~~~~  116 (183)
T 3c85_A           39 HAQVLILGM-GRIGTGAYDELRARYGKISLGIEIREEAAQQ-HRSEGRNVISGDATDPDFWERILDTGHVKLVLLAMPHH  116 (183)
T ss_dssp             TCSEEEECC-SHHHHHHHHHHHHHHCSCEEEEESCHHHHHH-HHHTTCCEEECCTTCHHHHHTBCSCCCCCEEEECCSSH
T ss_pred             CCcEEEECC-CHHHHHHHHHHHhccCCeEEEEECCHHHHHH-HHHCCCCEEEcCCCCHHHHHhccCCCCCCEEEEeCCCh
Confidence            468999995 99999999999999 9999999998754221 2224678899999999888887  78999999886431


Q ss_pred             CCcchhhhhhhHHHHHHHHHHHHcC-CCEEEE
Q 023205          133 GSNSYMYKINGTANINAIRAASEKG-VKRFVY  163 (286)
Q Consensus       133 ~~~~~~~~~~~~~~~~l~~~a~~~~-v~~~v~  163 (286)
                                 .....++..+++.+ ..+++.
T Consensus       117 -----------~~~~~~~~~~~~~~~~~~ii~  137 (183)
T 3c85_A          117 -----------QGNQTALEQLQRRNYKGQIAA  137 (183)
T ss_dssp             -----------HHHHHHHHHHHHTTCCSEEEE
T ss_pred             -----------HHHHHHHHHHHHHCCCCEEEE
Confidence                       12234456676666 334443

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=98.34  E-value=1e-06  Score=71.75  Aligned_cols=93  Identities=14%  Similarity=0.104  Sum_probs=69.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHH-hcCCCEEEEccccCCC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEA-LDGVTAVISCVGGFGS  134 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~-~~~~d~vi~~a~~~~~  134 (286)
                      .++|+|+|+ |.+|+.+++.|.+.|+ |++++|+++.... .. .++.++.+|.+|++.++++ ++++|.||.+.+..  
T Consensus         9 ~~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~~~~~~~-~~-~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d--   82 (234)
T 2aef_A            9 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKKV-LR-SGANFVHGDPTRVSDLEKANVRGARAVIVDLESD--   82 (234)
T ss_dssp             -CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCGGGHHHH-HH-TTCEEEESCTTCHHHHHHTTCTTCSEEEECCSCH--
T ss_pred             CCEEEEECC-ChHHHHHHHHHHhCCe-EEEEECCHHHHHH-Hh-cCCeEEEcCCCCHHHHHhcCcchhcEEEEcCCCc--
Confidence            468999997 9999999999999999 9999988665322 22 5789999999999999887 88999999886421  


Q ss_pred             cchhhhhhhHHHHHHHHHHHHcCCC-EEEE
Q 023205          135 NSYMYKINGTANINAIRAASEKGVK-RFVY  163 (286)
Q Consensus       135 ~~~~~~~~~~~~~~l~~~a~~~~v~-~~v~  163 (286)
                               ..+..++..+++.+.+ ++|-
T Consensus        83 ---------~~n~~~~~~a~~~~~~~~iia  103 (234)
T 2aef_A           83 ---------SETIHCILGIRKIDESVRIIA  103 (234)
T ss_dssp             ---------HHHHHHHHHHHHHCSSSEEEE
T ss_pred             ---------HHHHHHHHHHHHHCCCCeEEE
Confidence                     1222345566666654 4443

>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*

Probab=98.30  E-value=8.6e-07  Score=73.83  Aligned_cols=76  Identities=16%  Similarity=0.190  Sum_probs=43.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHC-CCeEEEEec-CCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEcccc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDR-GLTVASLSR-SGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG  131 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~-g~~V~~l~R-~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~  131 (286)
                      +++|+|+|++|.+|+.+++.+.+. ++++.++.+ +++............+-..++...+++++++.++|+||+++.+
T Consensus         5 ~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~~~~~~g~d~~~~~g~~~~~v~~~~dl~~~l~~~DvVIDft~p   82 (273)
T 1dih_A            5 NIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKDDFDVFIDFTRP   82 (273)
T ss_dssp             BEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTTTSCSEEEECSCH
T ss_pred             CcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCchhhhhhhHHHHcCCCcCCceecCCHHHHhcCCCEEEEcCCh
Confidence            368999999999999999998865 678775544 3322110000000000001111112234556689999988754

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=98.02  E-value=4.5e-06  Score=65.95  Aligned_cols=96  Identities=23%  Similarity=0.225  Sum_probs=61.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHH---HHHhc--CCCEEEEccc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSW---KEALD--GVTAVISCVG  130 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~---~~~~~--~~d~vi~~a~  130 (286)
                      .++|+|+||+|.+|..+++.+...|.+|++++|++++.... ...+...+ .|..+.+..   .+...  ++|+||+++|
T Consensus        39 g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~-~~~g~~~~-~d~~~~~~~~~~~~~~~~~~~D~vi~~~g  116 (198)
T 1pqw_A           39 GERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREML-SRLGVEYV-GDSRSVDFADEILELTDGYGVDVVLNSLA  116 (198)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHH-HTTCCSEE-EETTCSTHHHHHHHHTTTCCEEEEEECCC
T ss_pred             CCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCCCEE-eeCCcHHHHHHHHHHhCCCCCeEEEECCc
Confidence            57899999999999999999999999999999876442111 11122222 366554333   33332  5899999986


Q ss_pred             cCCCcchhhhhhhHHHHHHHHHHHHcCCCEEEEEecC
Q 023205          131 GFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAA  167 (286)
Q Consensus       131 ~~~~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~  167 (286)
                      .     .       .....++.++..|  ++|.+++.
T Consensus       117 ~-----~-------~~~~~~~~l~~~G--~~v~~g~~  139 (198)
T 1pqw_A          117 G-----E-------AIQRGVQILAPGG--RFIELGKK  139 (198)
T ss_dssp             T-----H-------HHHHHHHTEEEEE--EEEECSCG
T ss_pred             h-----H-------HHHHHHHHhccCC--EEEEEcCC
Confidence            3     1       1123344443333  78888773

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=97.96  E-value=2.2e-05  Score=69.20  Aligned_cols=73  Identities=15%  Similarity=0.158  Sum_probs=61.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHH-hcCCCEEEEccc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEA-LDGVTAVISCVG  130 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~-~~~~d~vi~~a~  130 (286)
                      .++|+|+|. |.+|+.+++.|.+.|++|++++++++... .....++.++.||.++++.++++ ++++|+||.+.+
T Consensus         4 ~~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~~v~-~~~~~g~~vi~GDat~~~~L~~agi~~A~~viv~~~   77 (413)
T 3l9w_A            4 GMRVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDPDHIE-TLRKFGMKVFYGDATRMDLLESAGAAKAEVLINAID   77 (413)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEECCHHHHH-HHHHTTCCCEESCTTCHHHHHHTTTTTCSEEEECCS
T ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHH-HHHhCCCeEEEcCCCCHHHHHhcCCCccCEEEECCC
Confidence            457999997 99999999999999999999999976522 22234788999999999999887 788999998864

>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1

Probab=97.96  E-value=3.4e-05  Score=66.24  Aligned_cols=92  Identities=15%  Similarity=0.184  Sum_probs=56.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC---eEEEEec-CCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEcccc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGL---TVASLSR-SGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG  131 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~---~V~~l~R-~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~  131 (286)
                      +++|+|.||||++|+.+++.|+++++   +++++.. +....... . .+..+...|+ +++    .++++|+||.|.+.
T Consensus         6 ~~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~s~~~~g~~~~-~-~g~~i~~~~~-~~~----~~~~~DvV~~a~g~   78 (340)
T 2hjs_A            6 PLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQRMG-F-AESSLRVGDV-DSF----DFSSVGLAFFAAAA   78 (340)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCEEE-E-TTEEEECEEG-GGC----CGGGCSEEEECSCH
T ss_pred             CcEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEecCCCCCCccc-c-CCcceEEecC-CHH----HhcCCCEEEEcCCc
Confidence            46899999999999999999997654   5666653 22111100 0 1111111122 222    25789999999764


Q ss_pred             CCCcchhhhhhhHHHHHHHHHHHHcCCCEEEEEecC
Q 023205          132 FGSNSYMYKINGTANINAIRAASEKGVKRFVYISAA  167 (286)
Q Consensus       132 ~~~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~  167 (286)
                      .            ....++..+.++|++ +|.+|+.
T Consensus        79 ~------------~s~~~a~~~~~aG~k-vId~Sa~  101 (340)
T 2hjs_A           79 E------------VSRAHAERARAAGCS-VIDLSGA  101 (340)
T ss_dssp             H------------HHHHHHHHHHHTTCE-EEETTCT
T ss_pred             H------------HHHHHHHHHHHCCCE-EEEeCCC
Confidence            2            234556777778874 7777763

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=97.93  E-value=8.6e-07  Score=70.98  Aligned_cols=73  Identities=12%  Similarity=0.141  Sum_probs=49.6

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEE-eccCCCHhHHHHHhcCCCEEEEcccc
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWH-QGNLLSSDSWKEALDGVTAVISCVGG  131 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i-~~Dl~d~~~~~~~~~~~d~vi~~a~~  131 (286)
                      |+|+|+||+|.+|+.+++.|++.|++|++++|++++........+. .+ ..|+. .+++.++++++|+||++..+
T Consensus         1 m~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~D~Vi~~~~~   74 (212)
T 1jay_A            1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRR-IAGDASIT-GMKNEDAAEACDIAVLTIPW   74 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHH-HHSSCCEE-EEEHHHHHHHCSEEEECSCH
T ss_pred             CeEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcc-ccccCCCC-hhhHHHHHhcCCEEEEeCCh
Confidence            4799999999999999999999999999999986542110000000 00 01222 23466677889999999753

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=97.92  E-value=7e-06  Score=71.48  Aligned_cols=76  Identities=18%  Similarity=0.135  Sum_probs=57.2

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccccC
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGF  132 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~~  132 (286)
                      ..++|+|+|+ |.+|..+++.|...|++|++++|++++.......-+.. +.+|..+.+++.+.++++|+||++++..
T Consensus       165 ~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g~~-~~~~~~~~~~l~~~~~~~DvVi~~~g~~  240 (369)
T 2eez_A          165 APASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFGGR-VITLTATEANIKKSVQHADLLIGAVLVP  240 (369)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTS-EEEEECCHHHHHHHHHHCSEEEECCC--
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCce-EEEecCCHHHHHHHHhCCCEEEECCCCC
Confidence            3579999999 99999999999999999999999865421110001112 4567778888999999999999998753

>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A

Probab=97.90  E-value=1.1e-05  Score=69.58  Aligned_cols=91  Identities=18%  Similarity=0.208  Sum_probs=59.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCC-----C-eEEEEecCCC--cccccccC-----CceeEEeccCCCHhHHHHHhcCC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRG-----L-TVASLSRSGR--SSLRDSWA-----NNVIWHQGNLLSSDSWKEALDGV  122 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g-----~-~V~~l~R~~~--~~~~~~~~-----~~~~~i~~Dl~d~~~~~~~~~~~  122 (286)
                      |++|+|.||||++|+.+++.|++++     + +++++.++.+  +.......     ..+.+.  |+ +++    .+.++
T Consensus         9 m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~~agk~~~~~~~~l~~~~~~~~~--~~-~~~----~~~~~   81 (352)
T 2nqt_A            9 ATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAATSAGSTLGEHHPHLTPLAHRVVE--PT-EAA----VLGGH   81 (352)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESSCTTSBGGGTCTTCGGGTTCBCE--EC-CHH----HHTTC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCCcCCCchhhhcccccccceeeec--cC-CHH----HhcCC
Confidence            4699999999999999999999987     4 7888765432  21111100     112221  22 222    35689


Q ss_pred             CEEEEccccCCCcchhhhhhhHHHHHHHHHHHHcCCCEEEEEecC
Q 023205          123 TAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAA  167 (286)
Q Consensus       123 d~vi~~a~~~~~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~  167 (286)
                      |+||.|++...            ...++..+ +.|+ ++|-+|+.
T Consensus        82 DvVf~alg~~~------------s~~~~~~~-~~G~-~vIDlSa~  112 (352)
T 2nqt_A           82 DAVFLALPHGH------------SAVLAQQL-SPET-LIIDCGAD  112 (352)
T ss_dssp             SEEEECCTTSC------------CHHHHHHS-CTTS-EEEECSST
T ss_pred             CEEEECCCCcc------------hHHHHHHH-hCCC-EEEEECCC
Confidence            99999987642            22456666 6775 78888874

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=97.90  E-value=5.4e-06  Score=71.11  Aligned_cols=105  Identities=18%  Similarity=0.130  Sum_probs=70.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCC--CeEEEEecCCCcccc------cccCCceeEEeccCCCHhHHHHHhcCCCEEEE
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRG--LTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALDGVTAVIS  127 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g--~~V~~l~R~~~~~~~------~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~  127 (286)
                      ++||.|+|++|++|+.++..|+..|  .+|.+++.+.++...      ....+.     .++.-..++.++++++|+||.
T Consensus         8 ~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~~~~-----~~i~~t~d~~~al~dADvVvi   82 (343)
T 3fi9_A            8 EEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGFEG-----LNLTFTSDIKEALTDAKYIVS   82 (343)
T ss_dssp             SSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHCCTT-----CCCEEESCHHHHHTTEEEEEE
T ss_pred             CCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCcCCC-----CceEEcCCHHHHhCCCCEEEE
Confidence            5689999999999999999999998  489999987543110      000111     111112346678999999999


Q ss_pred             ccccCCCc----chhhhhhhHHHHHHHHHHHHcCCCE--EEEEe
Q 023205          128 CVGGFGSN----SYMYKINGTANINAIRAASEKGVKR--FVYIS  165 (286)
Q Consensus       128 ~a~~~~~~----~~~~~~~~~~~~~l~~~a~~~~v~~--~v~~S  165 (286)
                      ++|....+    .+.+..|......+++.+.+...+-  ++.+|
T Consensus        83 taG~p~kpG~~R~dLl~~N~~I~~~i~~~i~~~~p~a~~vlvvs  126 (343)
T 3fi9_A           83 SGGAPRKEGMTREDLLKGNAEIAAQLGKDIKSYCPDCKHVIIIF  126 (343)
T ss_dssp             CCC-------CHHHHHHHHHHHHHHHHHHHHHHCTTCCEEEECS
T ss_pred             ccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhccCcEEEEEec
Confidence            99864322    2456788888889999998877654  34444

>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A

Probab=97.85  E-value=2.3e-05  Score=67.28  Aligned_cols=89  Identities=13%  Similarity=0.122  Sum_probs=68.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHH-hcCCCEEEEccccCCC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEA-LDGVTAVISCVGGFGS  134 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~-~~~~d~vi~~a~~~~~  134 (286)
                      .++|+|.|+ |.+|+.++++|.++|+ |++++++++...  ....++.++.+|.+|++.++++ ++++|.|+.+.+.   
T Consensus       115 ~~~viI~G~-G~~g~~l~~~L~~~g~-v~vid~~~~~~~--~~~~~~~~i~gd~~~~~~L~~a~i~~a~~vi~~~~~---  187 (336)
T 1lnq_A          115 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKK--VLRSGANFVHGDPTRVSDLEKANVRGARAVIVDLES---  187 (336)
T ss_dssp             -CEEEEESC-CHHHHHHHTTGGGSCE-EEEESCGGGHHH--HHHTTCEEEESCTTSHHHHHHTCSTTEEEEEECCSS---
T ss_pred             cCCEEEECC-cHHHHHHHHHHHhCCc-EEEEeCChhhhh--HHhCCcEEEEeCCCCHHHHHhcChhhccEEEEcCCc---
Confidence            458999997 9999999999999999 999998876533  2336889999999999999988 8899999987532   


Q ss_pred             cchhhhhhhHHHHHHHHHHHHcCCC
Q 023205          135 NSYMYKINGTANINAIRAASEKGVK  159 (286)
Q Consensus       135 ~~~~~~~~~~~~~~l~~~a~~~~v~  159 (286)
                      +        ..+..++..+++.+.+
T Consensus       188 d--------~~n~~~~~~ar~~~~~  204 (336)
T 1lnq_A          188 D--------SETIHCILGIRKIDES  204 (336)
T ss_dssp             H--------HHHHHHHHHHHTTCTT
T ss_pred             c--------HHHHHHHHHHHHHCCC
Confidence            1        1222345566666654

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=97.79  E-value=3.3e-05  Score=66.57  Aligned_cols=75  Identities=15%  Similarity=0.029  Sum_probs=52.1

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhc-----CCCEEEEcc
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD-----GVTAVISCV  129 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~-----~~d~vi~~a  129 (286)
                      ..++|||+|++|.+|..+++.+...|.+|++++|++++.... ..-+... ..|+.+.+++.+.+.     ++|+||+++
T Consensus       169 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~-~~~g~~~-~~d~~~~~~~~~~~~~~~~~~~D~vi~~~  246 (347)
T 2hcy_A          169 AGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELF-RSIGGEV-FIDFTKEKDIVGAVLKATDGGAHGVINVS  246 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHH-HHTTCCE-EEETTTCSCHHHHHHHHHTSCEEEEEECS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHH-HHcCCce-EEecCccHhHHHHHHHHhCCCCCEEEECC
Confidence            457999999999999999999999999999999986653111 1112222 236664333333332     689999998


Q ss_pred             cc
Q 023205          130 GG  131 (286)
Q Consensus       130 ~~  131 (286)
                      |.
T Consensus       247 g~  248 (347)
T 2hcy_A          247 VS  248 (347)
T ss_dssp             SC
T ss_pred             Cc
Confidence            74

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*

Probab=97.78  E-value=0.00012  Score=61.92  Aligned_cols=105  Identities=15%  Similarity=0.164  Sum_probs=68.5

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCCCcccc---cc------cCCceeEEeccCCCHhHHHHHhcCCCE
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSLR---DS------WANNVIWHQGNLLSSDSWKEALDGVTA  124 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~~---~~------~~~~~~~i~~Dl~d~~~~~~~~~~~d~  124 (286)
                      |+++|.|+|+ |++|..++..|+..|+ +|.++++++++...   ..      .....++...  .|   + +.++++|+
T Consensus         1 M~~kI~VIGa-G~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d---~-~a~~~aD~   73 (309)
T 1ur5_A            1 MRKKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGT--NN---Y-ADTANSDV   73 (309)
T ss_dssp             -CCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE--SC---G-GGGTTCSE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEEC--CC---H-HHHCCCCE
Confidence            3579999998 9999999999999996 88888887643211   00      0112222210  12   3 46889999


Q ss_pred             EEEccccCCCc----chhhhhhhHHHHHHHHHHHHcCCCEEEEEec
Q 023205          125 VISCVGGFGSN----SYMYKINGTANINAIRAASEKGVKRFVYISA  166 (286)
Q Consensus       125 vi~~a~~~~~~----~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss  166 (286)
                      ||.++|....+    ......|......+++.+.+...+.++.+.|
T Consensus        74 Vi~a~g~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~t  119 (309)
T 1ur5_A           74 IVVTSGAPRKPGMSREDLIKVNADITRACISQAAPLSPNAVIIMVN  119 (309)
T ss_dssp             EEECCCC--------CHHHHHHHHHHHHHHHHHGGGCTTCEEEECC
T ss_pred             EEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEcC
Confidence            99999865322    2334566666677888888877666666665

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=97.76  E-value=0.00017  Score=61.48  Aligned_cols=149  Identities=15%  Similarity=0.174  Sum_probs=91.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC--eEEEEecCCCcccc------cc---cCCceeEEeccCCCHhHHHHHhcCCCE
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGL--TVASLSRSGRSSLR------DS---WANNVIWHQGNLLSSDSWKEALDGVTA  124 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~--~V~~l~R~~~~~~~------~~---~~~~~~~i~~Dl~d~~~~~~~~~~~d~  124 (286)
                      +++|.|+|+ |++|..++..|+..|.  +|.+++++.++...      ..   ...++++...|       .++++++|+
T Consensus         5 ~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~-------~~a~~~aDv   76 (326)
T 3pqe_A            5 VNKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGT-------YEDCKDADI   76 (326)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEEC-------GGGGTTCSE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCc-------HHHhCCCCE
Confidence            568999996 9999999999999886  89999987543211      10   11234444333       246889999


Q ss_pred             EEEccccCCCc----chhhhhhhHHHHHHHHHHHHcCCCEEEEEec-CC---------c-CCCCccccchHHH--HHHHH
Q 023205          125 VISCVGGFGSN----SYMYKINGTANINAIRAASEKGVKRFVYISA-AD---------F-GVANYLLQGYYEG--KRAAE  187 (286)
Q Consensus       125 vi~~a~~~~~~----~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss-~~---------~-~~~~~~~~~y~~s--K~~~E  187 (286)
                      ||.++|....+    ...+..|......+++.+.+...+-++.+-| ..         + +.+.....+.+..  -....
T Consensus        77 Vvi~ag~p~kpG~~R~dL~~~N~~Iv~~i~~~I~~~~p~a~vlvvtNPvd~~t~~~~k~~g~p~~rviG~gt~LD~~R~~  156 (326)
T 3pqe_A           77 VCICAGANQKPGETRLELVEKNLKIFKGIVSEVMASGFDGIFLVATNPVDILTYATWKFSGLPKERVIGSGTTLDSARFR  156 (326)
T ss_dssp             EEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECSSSHHHHHHHHHHHHCCCGGGEEECTTHHHHHHHH
T ss_pred             EEEecccCCCCCccHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcCChHHHHHHHHHHhcCCCHHHEEeeccccHHHHHH
Confidence            99999865322    2456778888888899998877654444444 10         0 1111111111111  12233


Q ss_pred             HHHHHhCCCcEEEEeeCeeecCCCCC
Q 023205          188 TELLTRYPYGGVILRPGFIYGTRTVG  213 (286)
Q Consensus       188 ~~~~~~~g~~~~ilRp~~v~g~~~~~  213 (286)
                      ..+.+..|++..-++. +++|.....
T Consensus       157 ~~la~~lgv~~~~V~~-~V~GeHG~t  181 (326)
T 3pqe_A          157 FMLSEYFGAAPQNVCA-HIIGEHGDT  181 (326)
T ss_dssp             HHHHHHHTCCGGGEEC-CEEBSSSTT
T ss_pred             HHHHHHhCCCHHHcee-eeeecCCCc
Confidence            4455556777666664 688876443

>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}

Probab=97.71  E-value=6.7e-05  Score=62.19  Aligned_cols=73  Identities=18%  Similarity=0.217  Sum_probs=45.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHC-CCeEEE-EecCCCcccccccC--CceeEEeccCCCHhHHHHHhcCCCEEEEcccc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDR-GLTVAS-LSRSGRSSLRDSWA--NNVIWHQGNLLSSDSWKEALDGVTAVISCVGG  131 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~-g~~V~~-l~R~~~~~~~~~~~--~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~  131 (286)
                      |++|.|+|++|.+|+.+++.+.+. +.++.+ ++|+.+........  .++.  . ++.-.+++++++.++|+||.+..+
T Consensus         7 mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~~~G~d~gel~g~~--~-gv~v~~dl~~ll~~~DVVIDfT~p   83 (272)
T 4f3y_A            7 SMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSPQLGQDAGAFLGKQ--T-GVALTDDIERVCAEADYLIDFTLP   83 (272)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTCTTTTSBTTTTTTCC--C-SCBCBCCHHHHHHHCSEEEECSCH
T ss_pred             ccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCcccccccHHHHhCCC--C-CceecCCHHHHhcCCCEEEEcCCH
Confidence            468999999999999999999987 467766 46654321110000  0110  0 121223456666789999998643

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=97.69  E-value=3.2e-05  Score=66.25  Aligned_cols=75  Identities=28%  Similarity=0.224  Sum_probs=51.1

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHh-----cCCCEEEEcc
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEAL-----DGVTAVISCV  129 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~-----~~~d~vi~~a  129 (286)
                      ..++|+|+|++|.+|..+++.+...|++|++++|+.++.... ..-+... ..|..+.+++.+.+     .++|+||+++
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~-~~~g~~~-~~d~~~~~~~~~~~~~~~~~~~d~vi~~~  222 (333)
T 1v3u_A          145 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYL-KQIGFDA-AFNYKTVNSLEEALKKASPDGYDCYFDNV  222 (333)
T ss_dssp             SSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHTTCSE-EEETTSCSCHHHHHHHHCTTCEEEEEESS
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HhcCCcE-EEecCCHHHHHHHHHHHhCCCCeEEEECC
Confidence            467899999999999999999999999999999875442111 1112221 23665522332222     2589999999


Q ss_pred             cc
Q 023205          130 GG  131 (286)
Q Consensus       130 ~~  131 (286)
                      |.
T Consensus       223 g~  224 (333)
T 1v3u_A          223 GG  224 (333)
T ss_dssp             CH
T ss_pred             Ch
Confidence            74

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*

Probab=97.69  E-value=0.00056  Score=58.45  Aligned_cols=105  Identities=18%  Similarity=0.161  Sum_probs=69.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCCCcccc--cc-------cCCceeEEeccCCCHhHHHHHhcCCCEE
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSLR--DS-------WANNVIWHQGNLLSSDSWKEALDGVTAV  125 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~~--~~-------~~~~~~~i~~Dl~d~~~~~~~~~~~d~v  125 (286)
                      +++|.|+|| |.+|..++..|...|+ +|.+.+++++....  ..       .....++..     ..+++++++++|+|
T Consensus         9 ~~kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~-----t~d~~ea~~~aDiV   82 (331)
T 1pzg_A            9 RKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRA-----EYSYEAALTGADCV   82 (331)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEE-----ECSHHHHHTTCSEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEE-----eCCHHHHhCCCCEE
Confidence            468999998 9999999999999998 99999998754211  00       001111111     12355678999999


Q ss_pred             EEccccCCCc---------chhhhhhhHHHHHHHHHHHHcCCCEEEEEec
Q 023205          126 ISCVGGFGSN---------SYMYKINGTANINAIRAASEKGVKRFVYISA  166 (286)
Q Consensus       126 i~~a~~~~~~---------~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss  166 (286)
                      |.+++....+         ......|......+++.+.+...+-++.+.|
T Consensus        83 i~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~t  132 (331)
T 1pzg_A           83 IVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFIIVVT  132 (331)
T ss_dssp             EECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             EEccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEEc
Confidence            9999754322         1233455666677788877776554555555

>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A

Probab=97.68  E-value=6e-05  Score=65.10  Aligned_cols=93  Identities=16%  Similarity=0.208  Sum_probs=54.6

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCC---eEEEEecCCCcccc-cccCCceeEEeccCCCHhHHHHHhcCCCEEEEccc
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGL---TVASLSRSGRSSLR-DSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVG  130 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~---~V~~l~R~~~~~~~-~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~  130 (286)
                      |+++|.|.||||++|..+++.|.++++   ++..+.-..+.... ......+.+...|   +    ..++++|+||.|++
T Consensus         1 m~~kVaIvGATG~vG~eLlrlL~~~~~p~~el~~~as~~saG~~~~~~~~~~~~~~~~---~----~~~~~~Dvvf~a~~   73 (366)
T 3pwk_A            1 MGYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSAGKSLKFKDQDITIEETT---E----TAFEGVDIALFSAG   73 (366)
T ss_dssp             -CEEEEEETTTSHHHHHHHHHHHTCCCCEEEEEEEECTTTTTCEEEETTEEEEEEECC---T----TTTTTCSEEEECSC
T ss_pred             CCcEEEEECCCChHHHHHHHHHhcCCCCcEEEEEEEccccCCCcceecCCCceEeeCC---H----HHhcCCCEEEECCC
Confidence            356899999999999999998888755   44544432221111 1111122222222   1    13578999999976


Q ss_pred             cCCCcchhhhhhhHHHHHHHHHHHHcCCCEEEEEecC
Q 023205          131 GFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAA  167 (286)
Q Consensus       131 ~~~~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~  167 (286)
                      ..            .....+..+.+.|+ ++|-.|+.
T Consensus        74 ~~------------~s~~~a~~~~~~G~-~vIDlSa~   97 (366)
T 3pwk_A           74 SS------------TSAKYAPYAVKAGV-VVVDNTSY   97 (366)
T ss_dssp             HH------------HHHHHHHHHHHTTC-EEEECSST
T ss_pred             hH------------hHHHHHHHHHHCCC-EEEEcCCc
Confidence            41            22344555566776 57777763

>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}

Probab=97.67  E-value=0.00013  Score=62.78  Aligned_cols=95  Identities=15%  Similarity=0.150  Sum_probs=59.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCCCcccc-cccCCceeE-EeccCCCHhHHHHHhcCCCEEEEccccC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSLR-DSWANNVIW-HQGNLLSSDSWKEALDGVTAVISCVGGF  132 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~~-~~~~~~~~~-i~~Dl~d~~~~~~~~~~~d~vi~~a~~~  132 (286)
                      +++|.|.||||++|+.+++.|.+++. +++++.+..+.... ....+.+.- ....+.+.+   + +.++|+||.|++..
T Consensus         4 ~~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~~~~g~~~~~~~~~~~g~~~~~~~~~~---~-~~~vDvV~~a~g~~   79 (345)
T 2ozp_A            4 KKTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSRRFAGEPVHFVHPNLRGRTNLKFVPPE---K-LEPADILVLALPHG   79 (345)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCSTTTTSBGGGTCGGGTTTCCCBCBCGG---G-CCCCSEEEECCCTT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECchhhCchhHHhCchhcCcccccccchh---H-hcCCCEEEEcCCcH
Confidence            46899999999999999999998764 88887765432111 000000000 011122322   2 47899999998653


Q ss_pred             CCcchhhhhhhHHHHHHHHHHHHcCCCEEEEEecC
Q 023205          133 GSNSYMYKINGTANINAIRAASEKGVKRFVYISAA  167 (286)
Q Consensus       133 ~~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~  167 (286)
                                  ....++..+.++|+ ++|-+|+.
T Consensus        80 ------------~s~~~a~~~~~aG~-~VId~Sa~  101 (345)
T 2ozp_A           80 ------------VFAREFDRYSALAP-VLVDLSAD  101 (345)
T ss_dssp             ------------HHHHTHHHHHTTCS-EEEECSST
T ss_pred             ------------HHHHHHHHHHHCCC-EEEEcCcc
Confidence                        12344666667787 58888873

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=97.67  E-value=2.6e-05  Score=69.86  Aligned_cols=73  Identities=15%  Similarity=0.254  Sum_probs=59.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHH-hcCCCEEEEcc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEA-LDGVTAVISCV  129 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~-~~~~d~vi~~a  129 (286)
                      .|+|+|.|+ |.+|+++++.|.+.|++|++++++++........-.+..+.||-++++.++++ ++++|.++-+.
T Consensus         3 ~M~iiI~G~-G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~i~Gd~~~~~~L~~Agi~~ad~~ia~t   76 (461)
T 4g65_A            3 AMKIIILGA-GQVGGTLAENLVGENNDITIVDKDGDRLRELQDKYDLRVVNGHASHPDVLHEAGAQDADMLVAVT   76 (461)
T ss_dssp             CEEEEEECC-SHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHSSCEEEESCTTCHHHHHHHTTTTCSEEEECC
T ss_pred             cCEEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhcCcEEEEEcCCCHHHHHhcCCCcCCEEEEEc
Confidence            478999997 99999999999999999999999876532211123688999999999999887 57899988664

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=97.67  E-value=0.00019  Score=61.01  Aligned_cols=150  Identities=11%  Similarity=0.127  Sum_probs=84.1

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCC--eEEEEecCCCcccc------c--ccCCceeEEeccCCCHhHHHHHhcCCCE
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGL--TVASLSRSGRSSLR------D--SWANNVIWHQGNLLSSDSWKEALDGVTA  124 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~--~V~~l~R~~~~~~~------~--~~~~~~~~i~~Dl~d~~~~~~~~~~~d~  124 (286)
                      .+++|.|+|+ |.+|+.++..|+..+.  ++.++++++++...      .  .....+++...|       .+.++++|+
T Consensus         8 ~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~~-------~~a~~~aDi   79 (326)
T 3vku_A            8 DHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSAE-------YSDAKDADL   79 (326)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECC-------GGGGTTCSE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEECc-------HHHhcCCCE
Confidence            3579999996 9999999999999886  89999987543210      0  011234444332       246889999


Q ss_pred             EEEccccCCCc----chhhhhhhHHHHHHHHHHHHcCCCEEEEEec-CC---------c-CCCCccccchH--HHHHHHH
Q 023205          125 VISCVGGFGSN----SYMYKINGTANINAIRAASEKGVKRFVYISA-AD---------F-GVANYLLQGYY--EGKRAAE  187 (286)
Q Consensus       125 vi~~a~~~~~~----~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss-~~---------~-~~~~~~~~~y~--~sK~~~E  187 (286)
                      ||+++|....+    ...++.|......+++.+.+...+-++.+-| .+         + +.+....-+.+  ..-....
T Consensus        80 Vvi~ag~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~ilvvtNPvdi~t~~~~k~~g~p~~rviG~gt~LD~~R~~  159 (326)
T 3vku_A           80 VVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAANPVDILTYATWKLSGFPKNRVVGSGTSLDTARFR  159 (326)
T ss_dssp             EEECCCCC----------------CHHHHHHHHHTTTCCSEEEECSSSHHHHHHHHHHHHCCCGGGEEECTTHHHHHHHH
T ss_pred             EEECCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCceEEEEccCchHHHHHHHHHhcCCCHHHeeeecccCcHHHHH
Confidence            99999865322    3456778888888899988877654444444 10         0 11111111111  1112333


Q ss_pred             HHHHHhCCCcEEEEeeCeeecCCCCC
Q 023205          188 TELLTRYPYGGVILRPGFIYGTRTVG  213 (286)
Q Consensus       188 ~~~~~~~g~~~~ilRp~~v~g~~~~~  213 (286)
                      ..+.+..|++..-++. +++|.....
T Consensus       160 ~~la~~lgv~~~~V~~-~ViGeHGdt  184 (326)
T 3vku_A          160 QSIAKMVNVDARSVHA-YIMGEHGDT  184 (326)
T ss_dssp             HHHHHHHTSCGGGEEC-CEEBSSSTT
T ss_pred             HHHHHHhCCCHHHCeE-EEEcCCCCe
Confidence            4444556766666664 688876443

>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*

Probab=97.63  E-value=7.7e-05  Score=59.76  Aligned_cols=67  Identities=18%  Similarity=0.217  Sum_probs=49.1

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEcccc
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG  131 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~  131 (286)
                      ++++|.|+| +|.+|+.+++.|.+.|++|++.+|+.+.... ....++.+.        ++.++++++|+||.+..+
T Consensus        27 ~~~~I~iiG-~G~~G~~la~~l~~~g~~V~~~~r~~~~~~~-~~~~g~~~~--------~~~~~~~~~DvVi~av~~   93 (215)
T 2vns_A           27 EAPKVGILG-SGDFARSLATRLVGSGFKVVVGSRNPKRTAR-LFPSAAQVT--------FQEEAVSSPEVIFVAVFR   93 (215)
T ss_dssp             --CCEEEEC-CSHHHHHHHHHHHHTTCCEEEEESSHHHHHH-HSBTTSEEE--------EHHHHTTSCSEEEECSCG
T ss_pred             CCCEEEEEc-cCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHcCCcee--------cHHHHHhCCCEEEECCCh
Confidence            356899999 7999999999999999999999998654211 111234332        355678899999998764

>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}

Probab=97.62  E-value=0.00017  Score=62.29  Aligned_cols=94  Identities=19%  Similarity=0.176  Sum_probs=57.4

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCC-CeEEEEecCCCcc---cccccC-----------CceeEEeccCCCHhHHHHHh
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRG-LTVASLSRSGRSS---LRDSWA-----------NNVIWHQGNLLSSDSWKEAL  119 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g-~~V~~l~R~~~~~---~~~~~~-----------~~~~~i~~Dl~d~~~~~~~~  119 (286)
                      |+++|.|.||+|++|+.+++.|.+++ .+|+++.++....   ......           ..+.+...   |++   +++
T Consensus         7 M~~kV~IiGAtG~iG~~llr~L~~~p~~ev~~i~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~---~~~   80 (354)
T 1ys4_A            7 MKIKVGVLGATGSVGQRFVQLLADHPMFELTALAASERSAGKKYKDACYWFQDRDIPENIKDMVVIPT---DPK---HEE   80 (354)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTTSBHHHHSCCCCSSCCCHHHHTCBCEES---CTT---SGG
T ss_pred             ccceEEEECcCCHHHHHHHHHHhcCCCCEEEEEEcccccccccHHHhcccccccccccCceeeEEEeC---CHH---HHh
Confidence            34689999999999999999998875 5888887643211   100000           01111111   222   234


Q ss_pred             c-CCCEEEEccccCCCcchhhhhhhHHHHHHHHHHHHcCCCEEEEEecC
Q 023205          120 D-GVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAA  167 (286)
Q Consensus       120 ~-~~d~vi~~a~~~~~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~  167 (286)
                      + ++|+||.|.+..            ....++..+.++|+ ++|-.|+.
T Consensus        81 ~~~~DvV~~atp~~------------~~~~~a~~~~~aG~-~VId~s~~  116 (354)
T 1ys4_A           81 FEDVDIVFSALPSD------------LAKKFEPEFAKEGK-LIFSNASA  116 (354)
T ss_dssp             GTTCCEEEECCCHH------------HHHHHHHHHHHTTC-EEEECCST
T ss_pred             cCCCCEEEECCCch------------HHHHHHHHHHHCCC-EEEECCch
Confidence            5 899999997542            22344666667786 47766663

>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1

Probab=97.61  E-value=0.00025  Score=59.72  Aligned_cols=26  Identities=27%  Similarity=0.262  Sum_probs=24.1

Q ss_pred             ChhHHHHHHHHHHCCCeEEEEecCCC
Q 023205           66 GFVGSHICREALDRGLTVASLSRSGR   91 (286)
Q Consensus        66 G~iG~~l~~~Ll~~g~~V~~l~R~~~   91 (286)
                      |..|.+++++++++|++|+.+.|...
T Consensus        65 GkmG~aiAe~~~~~Ga~V~lv~g~~s   90 (313)
T 1p9o_A           65 GRRGATSAEAFLAAGYGVLFLYRARS   90 (313)
T ss_dssp             CHHHHHHHHHHHHTTCEEEEEEETTS
T ss_pred             cHHHHHHHHHHHHCCCEEEEEecCCC
Confidence            99999999999999999999999643

>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*

Probab=97.59  E-value=0.00032  Score=60.03  Aligned_cols=92  Identities=15%  Similarity=0.108  Sum_probs=58.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCC---CeEEEEecCCCc-ccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEcccc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRG---LTVASLSRSGRS-SLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG  131 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g---~~V~~l~R~~~~-~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~  131 (286)
                      +++|.|.||+|++|+.+++.|++++   .+++++....+. .........+.+...|   ++    .++++|+||.|.+.
T Consensus         3 ~~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~s~~~~G~~~~~~~~~i~~~~~~---~~----~~~~vDvVf~a~g~   75 (336)
T 2r00_A            3 QFNVAIFGATGAVGETMLEVLQEREFPVDELFLLASERSEGKTYRFNGKTVRVQNVE---EF----DWSQVHIALFSAGG   75 (336)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTTTCEEEETTEEEEEEEGG---GC----CGGGCSEEEECSCH
T ss_pred             ccEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEECCCCCCCceeecCceeEEecCC---hH----HhcCCCEEEECCCc
Confidence            5789999999999999999999983   477777632211 1101111123332222   22    34689999999765


Q ss_pred             CCCcchhhhhhhHHHHHHHHHHHHcCCCEEEEEecC
Q 023205          132 FGSNSYMYKINGTANINAIRAASEKGVKRFVYISAA  167 (286)
Q Consensus       132 ~~~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~  167 (286)
                      .            .....+..+.+.|+ ++|-.|+.
T Consensus        76 ~------------~s~~~a~~~~~~G~-~vId~s~~   98 (336)
T 2r00_A           76 E------------LSAKWAPIAAEAGV-VVIDNTSH   98 (336)
T ss_dssp             H------------HHHHHHHHHHHTTC-EEEECSST
T ss_pred             h------------HHHHHHHHHHHcCC-EEEEcCCc
Confidence            2            23345666677787 67777774

>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A

Probab=97.56  E-value=0.00016  Score=62.43  Aligned_cols=93  Identities=18%  Similarity=0.284  Sum_probs=58.5

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCCCcccc--ccc--CCceeEEeccCCCHhHHHHHhcCCCEEEEcccc
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSLR--DSW--ANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG  131 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~~--~~~--~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~  131 (286)
                      ++|.|.||+|++|+.+++.|.+++. +++++.+..+....  ...  ..+..  ..|+.-.+  ++.++++|+||.|++.
T Consensus        17 ~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~~~~g~~~~~~~~~~~~~v--~~dl~~~~--~~~~~~vDvVf~atp~   92 (359)
T 1xyg_A           17 IRIGLLGASGYTGAEIVRLLANHPHFQVTLMTADRKAGQSMESVFPHLRAQK--LPTLVSVK--DADFSTVDAVFCCLPH   92 (359)
T ss_dssp             EEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCSTTTTSCHHHHCGGGTTSC--CCCCBCGG--GCCGGGCSEEEECCCT
T ss_pred             cEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCchhcCCCHHHhCchhcCcc--cccceecc--hhHhcCCCEEEEcCCc
Confidence            5899999999999999999998864 88888765432111  000  01110  13332222  3456789999999865


Q ss_pred             CCCcchhhhhhhHHHHHHHHHHHHcCCCEEEEEecC
Q 023205          132 FGSNSYMYKINGTANINAIRAASEKGVKRFVYISAA  167 (286)
Q Consensus       132 ~~~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~  167 (286)
                      ..            +...+..+ +.|+ ++|-.|+.
T Consensus        93 ~~------------s~~~a~~~-~aG~-~VId~sa~  114 (359)
T 1xyg_A           93 GT------------TQEIIKEL-PTAL-KIVDLSAD  114 (359)
T ss_dssp             TT------------HHHHHHTS-CTTC-EEEECSST
T ss_pred             hh------------HHHHHHHH-hCCC-EEEECCcc
Confidence            32            22345556 6676 67877773

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=97.55  E-value=0.00012  Score=61.96  Aligned_cols=76  Identities=12%  Similarity=0.228  Sum_probs=56.0

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCCC---cccc--ccc--CCceeEEeccCCCHhHHHHHhcCCCEEE
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGR---SSLR--DSW--ANNVIWHQGNLLSSDSWKEALDGVTAVI  126 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~-~V~~l~R~~~---~~~~--~~~--~~~~~~i~~Dl~d~~~~~~~~~~~d~vi  126 (286)
                      ..++++|+|+ |.+|+.++..|.+.|. +|++.+|+.+   +...  +..  ..+..+...++.+.+++.+.+.++|+||
T Consensus       153 ~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~l~~aDiII  231 (315)
T 3tnl_A          153 IGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIAESVIFT  231 (315)
T ss_dssp             TTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTCSEEE
T ss_pred             cCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHhhhcCCCEEE
Confidence            4679999997 8999999999999997 8999999842   2111  000  0123344456777777888899999999


Q ss_pred             Ecccc
Q 023205          127 SCVGG  131 (286)
Q Consensus       127 ~~a~~  131 (286)
                      ++.+.
T Consensus       232 NaTp~  236 (315)
T 3tnl_A          232 NATGV  236 (315)
T ss_dssp             ECSST
T ss_pred             ECccC
Confidence            98753

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=97.54  E-value=9.2e-05  Score=63.93  Aligned_cols=75  Identities=21%  Similarity=0.231  Sum_probs=51.5

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhH---HHHHhc--CCCEEEEcc
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDS---WKEALD--GVTAVISCV  129 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~---~~~~~~--~~d~vi~~a  129 (286)
                      ..++|+|+||+|.+|..+++.+...|++|++++|++++.... ..-+... ..|..+.+.   +.+...  ++|+||+|+
T Consensus       170 ~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~ga~~-~~d~~~~~~~~~~~~~~~~~~~D~vi~~~  247 (351)
T 1yb5_A          170 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIV-LQNGAHE-VFNHREVNYIDKIKKYVGEKGIDIIIEML  247 (351)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHTTCSE-EEETTSTTHHHHHHHHHCTTCEEEEEESC
T ss_pred             CcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHH-HHcCCCE-EEeCCCchHHHHHHHHcCCCCcEEEEECC
Confidence            457899999999999999999999999999999886542111 1112221 135554433   333333  689999998


Q ss_pred             cc
Q 023205          130 GG  131 (286)
Q Consensus       130 ~~  131 (286)
                      |.
T Consensus       248 G~  249 (351)
T 1yb5_A          248 AN  249 (351)
T ss_dssp             HH
T ss_pred             Ch
Confidence            74

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=97.54  E-value=4.1e-05  Score=65.38  Aligned_cols=97  Identities=19%  Similarity=0.180  Sum_probs=61.1

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHH---HHh--cCCCEEEEcc
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWK---EAL--DGVTAVISCV  129 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~---~~~--~~~d~vi~~a  129 (286)
                      ..++|+|+||+|.+|..+++.+...|++|++++|++++..... .-+... ..|..+.+..+   +..  .++|+||+|+
T Consensus       140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~-~~g~~~-~~~~~~~~~~~~~~~~~~~~~~D~vi~~~  217 (327)
T 1qor_A          140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSAL-KAGAWQ-VINYREEDLVERLKEITGGKKVRVVYDSV  217 (327)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-HHTCSE-EEETTTSCHHHHHHHHTTTCCEEEEEECS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCCE-EEECCCccHHHHHHHHhCCCCceEEEECC
Confidence            4679999999999999999999999999999999754321110 011221 13555543333   333  2589999999


Q ss_pred             ccCCCcchhhhhhhHHHHHHHHHHHHcCCCEEEEEecC
Q 023205          130 GGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAA  167 (286)
Q Consensus       130 ~~~~~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~  167 (286)
                      |.     .       .....++.++..|  +++.+++.
T Consensus       218 g~-----~-------~~~~~~~~l~~~G--~iv~~g~~  241 (327)
T 1qor_A          218 GR-----D-------TWERSLDCLQRRG--LMVSFGNS  241 (327)
T ss_dssp             CG-----G-------GHHHHHHTEEEEE--EEEECCCT
T ss_pred             ch-----H-------HHHHHHHHhcCCC--EEEEEecC
Confidence            82     1       1122334443333  78888763

>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8

Probab=97.53  E-value=0.00044  Score=51.19  Aligned_cols=86  Identities=17%  Similarity=0.280  Sum_probs=58.3

Q ss_pred             CCeEEEEcCC---ChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccccC
Q 023205           56 SEKLLVLGGN---GFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGF  132 (286)
Q Consensus        56 ~~~VlVtGat---G~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~~  132 (286)
                      .++|.|.|++   |.+|..+++.|++.|++|+..+++....      .++..       ..++.++.+.+|+++-+..+ 
T Consensus        14 p~~IavIGaS~~~g~~G~~~~~~L~~~G~~V~~vnp~~~~i------~G~~~-------~~s~~el~~~vDlvii~vp~-   79 (138)
T 1y81_A           14 FRKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDEI------EGLKC-------YRSVRELPKDVDVIVFVVPP-   79 (138)
T ss_dssp             CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEE------TTEEC-------BSSGGGSCTTCCEEEECSCH-
T ss_pred             CCeEEEEeecCCCCCHHHHHHHHHHHCCCEEEEeCCCCCeE------CCeee-------cCCHHHhCCCCCEEEEEeCH-
Confidence            5689999997   8999999999999999988776653221      12221       12233444579999988542 


Q ss_pred             CCcchhhhhhhHHHHHHHHHHHHcCCCEEEEEec
Q 023205          133 GSNSYMYKINGTANINAIRAASEKGVKRFVYISA  166 (286)
Q Consensus       133 ~~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss  166 (286)
                                 .....+++.+.+.|++.++..++
T Consensus        80 -----------~~v~~v~~~~~~~g~~~i~~~~~  102 (138)
T 1y81_A           80 -----------KVGLQVAKEAVEAGFKKLWFQPG  102 (138)
T ss_dssp             -----------HHHHHHHHHHHHTTCCEEEECTT
T ss_pred             -----------HHHHHHHHHHHHcCCCEEEEcCc
Confidence                       23335566676788887766655

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=97.52  E-value=5e-05  Score=65.35  Aligned_cols=76  Identities=20%  Similarity=0.112  Sum_probs=50.8

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCH----hHHHHHh-cCCCEEEEcc
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSS----DSWKEAL-DGVTAVISCV  129 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~----~~~~~~~-~~~d~vi~~a  129 (286)
                      ..++|||+||+|.+|..+++.+...|.+|++++|++++.......-+...+ .|..+.    +.+.+.. .++|+||+++
T Consensus       155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~g~~~~-~d~~~~~~~~~~~~~~~~~~~d~vi~~~  233 (345)
T 2j3h_A          155 EGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKFGFDDA-FNYKEESDLTAALKRCFPNGIDIYFENV  233 (345)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTSCCSEE-EETTSCSCSHHHHHHHCTTCEEEEEESS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCceE-EecCCHHHHHHHHHHHhCCCCcEEEECC
Confidence            457999999999999999999999999999999886542111101122221 255443    2233322 3689999998


Q ss_pred             cc
Q 023205          130 GG  131 (286)
Q Consensus       130 ~~  131 (286)
                      |.
T Consensus       234 g~  235 (345)
T 2j3h_A          234 GG  235 (345)
T ss_dssp             CH
T ss_pred             CH
Confidence            73

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=97.52  E-value=5.6e-05  Score=64.72  Aligned_cols=74  Identities=20%  Similarity=0.228  Sum_probs=51.3

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc-cccCCceeEEeccCCCHh---HHHHHh--cCCCEEEEc
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-DSWANNVIWHQGNLLSSD---SWKEAL--DGVTAVISC  128 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~-~~~~~~~~~i~~Dl~d~~---~~~~~~--~~~d~vi~~  128 (286)
                      ..++|+|+||+|.+|..+++.+...|++|++++|++++... ...  +... ..|..+.+   .+.+..  .++|+||+|
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~--g~~~-~~d~~~~~~~~~i~~~~~~~~~d~vi~~  221 (333)
T 1wly_A          145 PGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARKL--GCHH-TINYSTQDFAEVVREITGGKGVDVVYDS  221 (333)
T ss_dssp             TTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH--TCSE-EEETTTSCHHHHHHHHHTTCCEEEEEEC
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc--CCCE-EEECCCHHHHHHHHHHhCCCCCeEEEEC
Confidence            45789999999999999999999999999999998643211 111  1121 13555433   333333  268999999


Q ss_pred             ccc
Q 023205          129 VGG  131 (286)
Q Consensus       129 a~~  131 (286)
                      +|.
T Consensus       222 ~g~  224 (333)
T 1wly_A          222 IGK  224 (333)
T ss_dssp             SCT
T ss_pred             CcH
Confidence            985

>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*

Probab=97.51  E-value=0.00084  Score=58.10  Aligned_cols=94  Identities=16%  Similarity=0.287  Sum_probs=55.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHH-CCC---eEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEcccc
Q 023205           56 SEKLLVLGGNGFVGSHICREALD-RGL---TVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG  131 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~-~g~---~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~  131 (286)
                      |++|.|.||+|++|+.+++.|+. +++   +++.+..+.....-... .+..+...|..+++.    ++++|+||.|.+.
T Consensus         1 m~kVaIvGAtG~vG~~llr~ll~~~~~~~v~i~~~~~~s~G~~v~~~-~g~~i~~~~~~~~~~----~~~~DvVf~a~g~   75 (367)
T 1t4b_A            1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAAPSF-GGTTGTLQDAFDLEA----LKALDIIVTCQGG   75 (367)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCCGG-GTCCCBCEETTCHHH----HHTCSEEEECSCH
T ss_pred             CcEEEEECCCCHHHHHHHHHHHhcCCCCeEEEEEEEeCCCCCCcccc-CCCceEEEecCChHH----hcCCCEEEECCCc
Confidence            46899999999999999995555 443   56666554221110000 011222223434444    3589999999763


Q ss_pred             CCCcchhhhhhhHHHHHHHHHHHHcCCCE-EEEEec
Q 023205          132 FGSNSYMYKINGTANINAIRAASEKGVKR-FVYISA  166 (286)
Q Consensus       132 ~~~~~~~~~~~~~~~~~l~~~a~~~~v~~-~v~~Ss  166 (286)
                                  ......+..+.+.|.+. +|=.||
T Consensus        76 ------------~~s~~~a~~~~~~G~k~vVID~ss   99 (367)
T 1t4b_A           76 ------------DYTNEIYPKLRESGWQGYWIDAAS   99 (367)
T ss_dssp             ------------HHHHHHHHHHHHTTCCCEEEECSS
T ss_pred             ------------hhHHHHHHHHHHCCCCEEEEcCCh
Confidence                        22335566667788753 444444

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=97.51  E-value=6.7e-05  Score=64.87  Aligned_cols=74  Identities=19%  Similarity=0.178  Sum_probs=49.9

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCCCcccccccCCceeEEeccCCCHh---HHHHHhc-CCCEEEEcccc
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSLRDSWANNVIWHQGNLLSSD---SWKEALD-GVTAVISCVGG  131 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~---~~~~~~~-~~d~vi~~a~~  131 (286)
                      ++|+|+||+|.+|..+++.+...|+ +|++++|+.++.......-+... ..|..+.+   .+.+... ++|+||+|+|.
T Consensus       162 ~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~g~~~-~~d~~~~~~~~~~~~~~~~~~d~vi~~~G~  240 (357)
T 2zb4_A          162 KTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFDA-AINYKKDNVAEQLRESCPAGVDVYFDNVGG  240 (357)
T ss_dssp             CEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCCSE-EEETTTSCHHHHHHHHCTTCEEEEEESCCH
T ss_pred             cEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCce-EEecCchHHHHHHHHhcCCCCCEEEECCCH
Confidence            7999999999999999999999999 99999987543211110012221 23555433   2333322 59999999983

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=97.47  E-value=9e-05  Score=63.48  Aligned_cols=76  Identities=20%  Similarity=0.172  Sum_probs=51.2

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhH---HHHHh-cCCCEEEEccc
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDS---WKEAL-DGVTAVISCVG  130 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~---~~~~~-~~~d~vi~~a~  130 (286)
                      ..++|||+|++|.+|..+++.+...|.+|++++|++++.......-+...+ .|..+.+.   +.+.. .++|+||+|+|
T Consensus       149 ~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~d~vi~~~g  227 (336)
T 4b7c_A          149 NGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEELGFDGA-IDYKNEDLAAGLKRECPKGIDVFFDNVG  227 (336)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCCSEE-EETTTSCHHHHHHHHCTTCEEEEEESSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCEE-EECCCHHHHHHHHHhcCCCceEEEECCC
Confidence            467999999999999999999999999999999886542211011122221 24444332   22222 36999999987


Q ss_pred             c
Q 023205          131 G  131 (286)
Q Consensus       131 ~  131 (286)
                      .
T Consensus       228 ~  228 (336)
T 4b7c_A          228 G  228 (336)
T ss_dssp             H
T ss_pred             c
Confidence            4

>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*

Probab=97.45  E-value=0.00048  Score=58.24  Aligned_cols=106  Identities=16%  Similarity=0.124  Sum_probs=69.8

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHC-C--CeEEEEecCCCcccc-----cccCCceeEEeccCCCHhHHHHHhcCCCEEEEc
Q 023205           57 EKLLVLGGNGFVGSHICREALDR-G--LTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALDGVTAVISC  128 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~-g--~~V~~l~R~~~~~~~-----~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~  128 (286)
                      |||.|+||+|++|..++..|..+ +  .++.++++++ +...     .......++... ..  +...+.++++|+||.+
T Consensus         1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~-~~~G~a~Dl~~~~~~~~v~~~-~~--~~~~~~~~~aDivii~   76 (312)
T 3hhp_A            1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHIPTAVKIKGF-SG--EDATPALEGADVVLIS   76 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST-THHHHHHHHHTSCSSEEEEEE-CS--SCCHHHHTTCSEEEEC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC-CchhHHHHhhCCCCCceEEEe-cC--CCcHHHhCCCCEEEEe
Confidence            58999999999999999998875 5  4899998876 2110     111112222211 00  1134578899999999


Q ss_pred             cccCCCc----chhhhhhhHHHHHHHHHHHHcCCCEEEEEec
Q 023205          129 VGGFGSN----SYMYKINGTANINAIRAASEKGVKRFVYISA  166 (286)
Q Consensus       129 a~~~~~~----~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss  166 (286)
                      +|....+    .+.++.|......+.+.+.+...+-++.+-|
T Consensus        77 ag~~rkpG~~R~dll~~N~~I~~~i~~~i~~~~p~a~vlvvt  118 (312)
T 3hhp_A           77 AGVARKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIIT  118 (312)
T ss_dssp             CSCSCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEec
Confidence            9865432    3566788888888888888876553443333

>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1

Probab=97.43  E-value=0.0013  Score=55.83  Aligned_cols=147  Identities=10%  Similarity=0.078  Sum_probs=85.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC--eEEEEecCCCcccc------cc--cCCceeEEeccCCCHhHHHHHhcCCCEE
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGL--TVASLSRSGRSSLR------DS--WANNVIWHQGNLLSSDSWKEALDGVTAV  125 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~--~V~~l~R~~~~~~~------~~--~~~~~~~i~~Dl~d~~~~~~~~~~~d~v  125 (286)
                      +++|.|+|+ |++|..++-.|+..+.  +|.+++.++++...      ..  ....+++. .  .+    .++++++|+|
T Consensus         7 ~~KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~-~--~~----~~a~~~aDvV   78 (318)
T 1y6j_A            7 RSKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLY-A--GD----YSDVKDCDVI   78 (318)
T ss_dssp             CCCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC-----C----GGGGTTCSEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEE-E--CC----HHHhCCCCEE
Confidence            468999998 9999999999999986  89999998654211      00  01123222 1  12    3468999999


Q ss_pred             EEccccCCCc----chhhhhhhHHHHHHHHHHHHcCCCEEEEEecC-C---------c-CCCCccccchHH--HHHHHHH
Q 023205          126 ISCVGGFGSN----SYMYKINGTANINAIRAASEKGVKRFVYISAA-D---------F-GVANYLLQGYYE--GKRAAET  188 (286)
Q Consensus       126 i~~a~~~~~~----~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~-~---------~-~~~~~~~~~y~~--sK~~~E~  188 (286)
                      |.+++....+    ......|......+++.+.+....-+|.+.|- .         + +.+....-+.+.  .-.....
T Consensus        79 ii~~g~p~k~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~k~s~~p~~rviG~gt~Ld~~r~~~  158 (318)
T 1y6j_A           79 VVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVVSNPVDIITYMIQKWSGLPVGKVIGSGTVLDSIRFRY  158 (318)
T ss_dssp             EECCCC------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEECSSSHHHHHHHHHHHHTCCTTTEEECTTHHHHHHHHH
T ss_pred             EEcCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEEecCcHHHHHHHHHHHcCCCHHHEeccCCchHHHHHHH
Confidence            9999865322    23446777777788888887765555555551 0         0 111111112211  1233344


Q ss_pred             HHHHhCCCcEEEEeeCeeecCCC
Q 023205          189 ELLTRYPYGGVILRPGFIYGTRT  211 (286)
Q Consensus       189 ~~~~~~g~~~~ilRp~~v~g~~~  211 (286)
                      .+.+..|++..-+.. ++.|.+.
T Consensus       159 ~la~~lgv~~~~v~~-~v~G~HG  180 (318)
T 1y6j_A          159 LLSEKLGVDVKNVHG-YIIGEHG  180 (318)
T ss_dssp             HHHTTTTCCTTTEEC-CEEBCSS
T ss_pred             HHHHHhCCCHHHeEE-EEecccC
Confidence            455567776666665 7777653

>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A

Probab=97.43  E-value=0.00075  Score=57.64  Aligned_cols=94  Identities=16%  Similarity=0.181  Sum_probs=58.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCC-CeEEEEecCC---Ccc--ccc----ccC-CceeEEeccCCCHhHHHHHhcCCCE
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRG-LTVASLSRSG---RSS--LRD----SWA-NNVIWHQGNLLSSDSWKEALDGVTA  124 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g-~~V~~l~R~~---~~~--~~~----~~~-~~~~~i~~Dl~d~~~~~~~~~~~d~  124 (286)
                      |++|.|.||||++|..+++.|.++. +++..+..+.   +..  ..+    ... ..+.+...  .+.+   ++.+++|+
T Consensus         4 M~kv~IvGatG~vG~~l~~~L~~~p~~el~~l~s~~~~~saGk~~~~~~p~~~~~~~~~v~~~--~~~~---~~~~~~Dv   78 (337)
T 3dr3_A            4 MLNTLIVGASGYAGAELVTYVNRHPHMNITALTVSAQSNDAGKLISDLHPQLKGIVELPLQPM--SDIS---EFSPGVDV   78 (337)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTSBHHHHCGGGTTTCCCBEEEE--SSGG---GTCTTCSE
T ss_pred             ceEEEEECCCChHHHHHHHHHHhCCCCcEEEEEecCchhhcCCchHHhCccccCccceeEecc--CCHH---HHhcCCCE
Confidence            5799999999999999999999864 5888776554   211  110    011 12222221  0222   23378999


Q ss_pred             EEEccccCCCcchhhhhhhHHHHHHHHHHHHcCCCEEEEEecC
Q 023205          125 VISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAA  167 (286)
Q Consensus       125 vi~~a~~~~~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~  167 (286)
                      ||.|.+..            ....++..+.+.|+ ++|-.|+.
T Consensus        79 vf~a~p~~------------~s~~~~~~~~~~g~-~vIDlSa~  108 (337)
T 3dr3_A           79 VFLATAHE------------VSHDLAPQFLEAGC-VVFDLSGA  108 (337)
T ss_dssp             EEECSCHH------------HHHHHHHHHHHTTC-EEEECSST
T ss_pred             EEECCChH------------HHHHHHHHHHHCCC-EEEEcCCc
Confidence            99986541            22344556667787 67877773

>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}

Probab=97.42  E-value=0.00027  Score=58.88  Aligned_cols=75  Identities=19%  Similarity=0.251  Sum_probs=44.4

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHC-CCeEEEE-ecCCCcccccccC--CceeEEeccCCCHhHHHHHhcCCCEEEEcc
Q 023205           54 PPSEKLLVLGGNGFVGSHICREALDR-GLTVASL-SRSGRSSLRDSWA--NNVIWHQGNLLSSDSWKEALDGVTAVISCV  129 (286)
Q Consensus        54 ~~~~~VlVtGatG~iG~~l~~~Ll~~-g~~V~~l-~R~~~~~~~~~~~--~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a  129 (286)
                      .++.+|.|.|++|.+|+.+++.+.+. +.++.+. +|+.+........  .++.  ..++.-.+++++++.++|+||.+.
T Consensus        19 ~~~irV~V~Ga~GrMGr~i~~~v~~~~~~eLvg~vd~~~~~~~G~d~gel~G~~--~~gv~v~~dl~~ll~~aDVvIDFT   96 (288)
T 3ijp_A           19 PGSMRLTVVGANGRMGRELITAIQRRKDVELCAVLVRKGSSFVDKDASILIGSD--FLGVRITDDPESAFSNTEGILDFS   96 (288)
T ss_dssp             --CEEEEESSTTSHHHHHHHHHHHTCSSEEEEEEBCCTTCTTTTSBGGGGTTCS--CCSCBCBSCHHHHTTSCSEEEECS
T ss_pred             cCCeEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCccccccchHHhhccC--cCCceeeCCHHHHhcCCCEEEEcC
Confidence            34579999999999999999999876 4676665 5543221100000  0000  111111234666777899999886


Q ss_pred             c
Q 023205          130 G  130 (286)
Q Consensus       130 ~  130 (286)
                      .
T Consensus        97 ~   97 (288)
T 3ijp_A           97 Q   97 (288)
T ss_dssp             C
T ss_pred             C
Confidence            4

>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}

Probab=97.42  E-value=0.00037  Score=60.02  Aligned_cols=92  Identities=16%  Similarity=0.175  Sum_probs=57.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCC-CeEEEEe--cCCC-cccccccC-----------CceeEEeccCCCHhHHHHHhc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRG-LTVASLS--RSGR-SSLRDSWA-----------NNVIWHQGNLLSSDSWKEALD  120 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g-~~V~~l~--R~~~-~~~~~~~~-----------~~~~~i~~Dl~d~~~~~~~~~  120 (286)
                      +++|.|.||+|++|+.+++.|.++. .++.++.  ++.. +.......           ..+.+  .|+ |++.    ++
T Consensus         4 ~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~-d~~~----~~   76 (350)
T 2ep5_A            4 KIKVSLLGSTGMVGQKMVKMLAKHPYLELVKVSASPSKIGKKYKDAVKWIEQGDIPEEVQDLPI--VST-NYED----HK   76 (350)
T ss_dssp             CEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEECCGGGTTSBHHHHCCCCSSSSCCHHHHTCBE--ECS-SGGG----GT
T ss_pred             CcEEEEECcCCHHHHHHHHHHHhCCCcEEEEEecChhhcCCCHHHhcCcccccccccCCceeEE--eeC-CHHH----hc
Confidence            4689999999999999999998875 4888886  2211 11110000           11122  222 3332    36


Q ss_pred             CCCEEEEccccCCCcchhhhhhhHHHHHHHHHHHHcCCCEEEEEecC
Q 023205          121 GVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAA  167 (286)
Q Consensus       121 ~~d~vi~~a~~~~~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~  167 (286)
                      ++|+||.|.+..            ....++..+.++|++ +|-.|+.
T Consensus        77 ~vDvVf~atp~~------------~s~~~a~~~~~aG~~-VId~s~~  110 (350)
T 2ep5_A           77 DVDVVLSALPNE------------LAESIELELVKNGKI-VVSNASP  110 (350)
T ss_dssp             TCSEEEECCCHH------------HHHHHHHHHHHTTCE-EEECSST
T ss_pred             CCCEEEECCChH------------HHHHHHHHHHHCCCE-EEECCcc
Confidence            899999887542            233557777788874 7766663

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=97.40  E-value=4.8e-05  Score=63.26  Aligned_cols=72  Identities=14%  Similarity=0.167  Sum_probs=48.4

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc--cccCCceeEEeccCCCHhHHHHHhcCCCEEEEccccC
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGF  132 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~--~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~~  132 (286)
                      ..++++|+|+ |.+|+.++..|++.|.+|++.+|+.++...  +.......+...|+   +++.+  .++|+||++++..
T Consensus       118 ~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~~~~~~~~~---~~~~~--~~~DivVn~t~~~  191 (271)
T 1nyt_A          118 PGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALSM---DELEG--HEFDLIINATSSG  191 (271)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEECCS---GGGTT--CCCSEEEECCSCG
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhccCCeeEecH---HHhcc--CCCCEEEECCCCC
Confidence            3579999998 889999999999999999999998654211  11110001212232   22222  5899999999764

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=97.39  E-value=0.00012  Score=63.36  Aligned_cols=75  Identities=17%  Similarity=0.152  Sum_probs=51.3

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHh---HHHHHhc--CCCEEEEcc
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSD---SWKEALD--GVTAVISCV  129 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~---~~~~~~~--~~d~vi~~a  129 (286)
                      ..++|+|+||+|.+|..+++.+...|++|++++|++++.... ..-+... ..|..+.+   .+.+...  ++|+||+|+
T Consensus       162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~d~vi~~~  239 (354)
T 2j8z_A          162 AGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMA-EKLGAAA-GFNYKKEDFSEATLKFTKGAGVNLILDCI  239 (354)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHHTCSE-EEETTTSCHHHHHHHHTTTSCEEEEEESS
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCCcE-EEecCChHHHHHHHHHhcCCCceEEEECC
Confidence            457899999999999999999999999999999876542111 0001221 23554433   3333332  689999999


Q ss_pred             cc
Q 023205          130 GG  131 (286)
Q Consensus       130 ~~  131 (286)
                      |.
T Consensus       240 G~  241 (354)
T 2j8z_A          240 GG  241 (354)
T ss_dssp             CG
T ss_pred             Cc
Confidence            85

>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6

Probab=97.38  E-value=0.00042  Score=58.34  Aligned_cols=56  Identities=23%  Similarity=0.325  Sum_probs=46.1

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEcccc
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG  131 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~  131 (286)
                      ++++|.|.||.|.+|..+++.|.+.|++|++.+|++..                     +..++++++|+||.+..+
T Consensus        20 ~~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~~---------------------~~~~~~~~aDvVilavp~   75 (298)
T 2pv7_A           20 DIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWA---------------------VAESILANADVVIVSVPI   75 (298)
T ss_dssp             TCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGG---------------------GHHHHHTTCSEEEECSCG
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCccc---------------------CHHHHhcCCCEEEEeCCH
Confidence            45689999988999999999999999999999887531                     244567889999988654

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*

Probab=97.36  E-value=0.00089  Score=56.12  Aligned_cols=147  Identities=14%  Similarity=0.059  Sum_probs=89.4

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCC--eEEEEecCCCccc------cc-c--cCCceeEEeccCCCHhHHHHHhcCCCEE
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGL--TVASLSRSGRSSL------RD-S--WANNVIWHQGNLLSSDSWKEALDGVTAV  125 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~--~V~~l~R~~~~~~------~~-~--~~~~~~~i~~Dl~d~~~~~~~~~~~d~v  125 (286)
                      |+|.|+|+ |.+|..++..|+..++  +|.+++++++...      .. .  .....++...  .|    .++++++|+|
T Consensus         1 MkI~ViGa-G~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d----~~a~~~aDiV   73 (294)
T 1oju_A            1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--AD----YSLLKGSEII   73 (294)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEE--SC----GGGGTTCSEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEe--CC----HHHhCCCCEE
Confidence            58999999 9999999999999887  8999999875421      00 0  1122233221  12    3578999999


Q ss_pred             EEccccCCCc----chhhhhhhHHHHHHHHHHHHcCCCEEEEEec-CC----------cCCCCccccchH--HHHHHHHH
Q 023205          126 ISCVGGFGSN----SYMYKINGTANINAIRAASEKGVKRFVYISA-AD----------FGVANYLLQGYY--EGKRAAET  188 (286)
Q Consensus       126 i~~a~~~~~~----~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss-~~----------~~~~~~~~~~y~--~sK~~~E~  188 (286)
                      |.++|....+    .+.+..|......+++.+.+.+.+-++.+-| .+          .+.+.....+.+  ..-.....
T Consensus        74 Viaag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvsNPvd~~t~~~~k~~g~p~~rviG~gt~LD~~R~~~  153 (294)
T 1oju_A           74 VVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTNPMDVMTYIMWKESGKPRNEVFGMGNQLDSQRLKE  153 (294)
T ss_dssp             EECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSSSHHHHHHHHHHHSCCCTTSEEECSHHHHHHHHHH
T ss_pred             EECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeCCcchHHHHHHHHhcCCCHHHEeecccccHHHHHHH
Confidence            9999865332    2455677777888888888876554444443 10          011111111221  11123334


Q ss_pred             HHHHhCCCcEEEEeeCeeecCCCCC
Q 023205          189 ELLTRYPYGGVILRPGFIYGTRTVG  213 (286)
Q Consensus       189 ~~~~~~g~~~~ilRp~~v~g~~~~~  213 (286)
                      ++. ..|++..-  -++++|.....
T Consensus       154 ~la-~l~v~~~~--~~~V~G~Hg~t  175 (294)
T 1oju_A          154 RLY-NAGARNIR--RAWIIGEHGDS  175 (294)
T ss_dssp             HHH-HTTCBSCC--CCCEEBCSSTT
T ss_pred             HHH-HhCCCccC--ceEEEecCCCc
Confidence            455 67776666  56788876443

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=97.36  E-value=0.00082  Score=54.75  Aligned_cols=72  Identities=24%  Similarity=0.272  Sum_probs=43.9

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHC-CCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHh-----cCCCEEEEccc
Q 023205           57 EKLLVLGGNGFVGSHICREALDR-GLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEAL-----DGVTAVISCVG  130 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~-g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~-----~~~d~vi~~a~  130 (286)
                      ++|+|.|++|.+|+.+++.+.+. ++++.+.....++.. .....+.. +..|++.++...+.+     .++++|+-..|
T Consensus         1 mkV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~-~~~~~~~D-vvIDfT~p~a~~~~~~~a~~~g~~~VigTTG   78 (245)
T 1p9l_A            1 MRVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLS-LLTDGNTE-VVIDFTHPDVVMGNLEFLIDNGIHAVVGTTG   78 (245)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTH-HHHHTTCC-EEEECSCTTTHHHHHHHHHHTTCEEEECCCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHH-HHhccCCc-EEEEccChHHHHHHHHHHHHcCCCEEEcCCC
Confidence            47999999999999999999876 789887765432211 11111223 334666655444332     24566665443

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=97.36  E-value=0.00014  Score=60.78  Aligned_cols=68  Identities=18%  Similarity=0.235  Sum_probs=49.0

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEcccc
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG  131 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~  131 (286)
                      ++|+|.|.|+||.+|..+++.|.+.|++|++.+|+++...... ..++.     ..+   ..++++++|+||.+..+
T Consensus        10 mmm~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~-~~g~~-----~~~---~~~~~~~aDvVi~av~~   77 (286)
T 3c24_A           10 GPKTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQ-GMGIP-----LTD---GDGWIDEADVVVLALPD   77 (286)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHH-HTTCC-----CCC---SSGGGGTCSEEEECSCH
T ss_pred             cCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH-hcCCC-----cCC---HHHHhcCCCEEEEcCCc
Confidence            4579999999999999999999999999999998864421111 01221     122   23467789999998754

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=97.34  E-value=2.1e-05  Score=58.75  Aligned_cols=71  Identities=13%  Similarity=0.098  Sum_probs=50.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccccC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGF  132 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~~  132 (286)
                      .++|+|+|+ |.+|+.+++.|.+.|++|++.+|++++.......-+....     ..+++.++++++|+||.+.+..
T Consensus        21 ~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~~~~~-----~~~~~~~~~~~~Divi~at~~~   91 (144)
T 3oj0_A           21 GNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYEYEYV-----LINDIDSLIKNNDVIITATSSK   91 (144)
T ss_dssp             CCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHTCEEE-----ECSCHHHHHHTCSEEEECSCCS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhCCceE-----eecCHHHHhcCCCEEEEeCCCC
Confidence            568999996 9999999999999998999999986553211000012222     1234566778999999998654

>3uw3_A Aspartate-semialdehyde dehydrogenase; structural genomics, seattle structural genomics center for infectious disease (ssgcid); 1.55A {Burkholderia thailandensis}

Probab=97.34  E-value=0.0017  Score=56.30  Aligned_cols=93  Identities=18%  Similarity=0.228  Sum_probs=54.1

Q ss_pred             CCeEEEEcCCChhHHHHHH-HHHHCCC---eEEEEecCCCc-ccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccc
Q 023205           56 SEKLLVLGGNGFVGSHICR-EALDRGL---TVASLSRSGRS-SLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVG  130 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~-~Ll~~g~---~V~~l~R~~~~-~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~  130 (286)
                      +++|.|.||||++|..+++ .|.++.+   ++..++-+... ...........+.  ++.+++.    +.++|+||.|++
T Consensus         4 ~~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~~aG~~~~~~~~~~~~v~--~~~~~~~----~~~vDvvf~a~~   77 (377)
T 3uw3_A            4 SMNVGLVGWRGMVGSVLMQRMQEEGDFDLIEPVFFSTSNAGGKAPSFAKNETTLK--DATSIDD----LKKCDVIITCQG   77 (377)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSCTTSBCCTTCCSCCBCE--ETTCHHH----HHTCSEEEECSC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhhCCCCceEEEEEechhcCCCHHHcCCCceEEE--eCCChhH----hcCCCEEEECCC
Confidence            4689999999999999999 5555553   66665433221 1111111111121  3333332    468999999976


Q ss_pred             cCCCcchhhhhhhHHHHHHHHHHHHcCCC-EEEEEec
Q 023205          131 GFGSNSYMYKINGTANINAIRAASEKGVK-RFVYISA  166 (286)
Q Consensus       131 ~~~~~~~~~~~~~~~~~~l~~~a~~~~v~-~~v~~Ss  166 (286)
                      ..            ....++..+.+.|++ .+|=.|+
T Consensus        78 ~~------------~s~~~~~~~~~~G~k~~VID~ss  102 (377)
T 3uw3_A           78 GD------------YTNDVFPKLRAAGWNGYWIDAAS  102 (377)
T ss_dssp             HH------------HHHHHHHHHHHTTCCSEEEECSS
T ss_pred             hH------------HHHHHHHHHHHCCCCEEEEeCCc
Confidence            41            223445556677874 5555555

>3pzr_A Aspartate-semialdehyde dehydrogenase; NADP, oxidoreductase-oxidoreductase inhibitor complex; HET: NAP; 1.75A {Vibrio cholerae} PDB: 1mc4_A 1mb4_A* 3q0e_A

Probab=97.31  E-value=0.0019  Score=55.75  Aligned_cols=92  Identities=21%  Similarity=0.291  Sum_probs=52.9

Q ss_pred             CeEEEEcCCChhHHHHHH-HHHHCCC---eEEEEecCCCc-ccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEcccc
Q 023205           57 EKLLVLGGNGFVGSHICR-EALDRGL---TVASLSRSGRS-SLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG  131 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~-~Ll~~g~---~V~~l~R~~~~-~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~  131 (286)
                      ++|.|.||||++|..+++ .|.++.+   ++..++-+... ...........+.  |..+++    .++++|+||.|++.
T Consensus         1 ~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~~aG~~~~~~~~~~~~~~--~~~~~~----~~~~~Dvvf~a~~~   74 (370)
T 3pzr_A            1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIGVPAPNFGKDAGMLH--DAFDIE----SLKQLDAVITCQGG   74 (370)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCCCSSSCCCBCE--ETTCHH----HHTTCSEEEECSCH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCCCceEEEEEeccccCcCHHHhCCCceEEE--ecCChh----HhccCCEEEECCCh
Confidence            479999999999999999 6665553   66655433222 1111111112221  232332    25789999999765


Q ss_pred             CCCcchhhhhhhHHHHHHHHHHHHcCCC-EEEEEec
Q 023205          132 FGSNSYMYKINGTANINAIRAASEKGVK-RFVYISA  166 (286)
Q Consensus       132 ~~~~~~~~~~~~~~~~~l~~~a~~~~v~-~~v~~Ss  166 (286)
                      .            .....+..+.+.|.+ .+|=.|+
T Consensus        75 ~------------~s~~~~~~~~~~G~k~~VID~ss   98 (370)
T 3pzr_A           75 S------------YTEKVYPALRQAGWKGYWIDAAS   98 (370)
T ss_dssp             H------------HHHHHHHHHHHTTCCCEEEECSS
T ss_pred             H------------HHHHHHHHHHHCCCCEEEEeCCc
Confidence            1            223445555667774 5555555

>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}

Probab=97.30  E-value=0.0016  Score=55.11  Aligned_cols=103  Identities=15%  Similarity=0.083  Sum_probs=69.7

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCC--eEEEEecCCCcccc------cc---cCCceeEEeccCCCHhHHHHHhcCCCEE
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGL--TVASLSRSGRSSLR------DS---WANNVIWHQGNLLSSDSWKEALDGVTAV  125 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~--~V~~l~R~~~~~~~------~~---~~~~~~~i~~Dl~d~~~~~~~~~~~d~v  125 (286)
                      |+|.|+|+ |.+|..++..|+..+.  +|.++++++++...      ..   .....++...|  +    .+.++++|+|
T Consensus         1 Mkv~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~--~----~~a~~~aDvV   73 (314)
T 3nep_X            1 MKVTVIGA-GNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTN--D----YGPTEDSDVC   73 (314)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEES--S----SGGGTTCSEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECC--C----HHHhCCCCEE
Confidence            58999997 9999999999999886  89999998765211      00   01123333222  1    2578899999


Q ss_pred             EEccccCCCc----chhhhhhhHHHHHHHHHHHHcCCCEEEEEec
Q 023205          126 ISCVGGFGSN----SYMYKINGTANINAIRAASEKGVKRFVYISA  166 (286)
Q Consensus       126 i~~a~~~~~~----~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss  166 (286)
                      |.++|....+    ...++.|......+.+.+.+...+-++.+-|
T Consensus        74 ii~ag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvt  118 (314)
T 3nep_X           74 IITAGLPRSPGMSRDDLLAKNTEIVGGVTEQFVEGSPDSTIIVVA  118 (314)
T ss_dssp             EECCCC-------CHHHHHHHHHHHHHHHHHHHTTCTTCEEEECC
T ss_pred             EECCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEecC
Confidence            9999875332    3556778888888888888876554444444

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=97.30  E-value=0.0024  Score=54.31  Aligned_cols=103  Identities=17%  Similarity=0.197  Sum_probs=70.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCCCcccc------cc---cCCceeEEe-ccCCCHhHHHHHhcCCCE
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSLR------DS---WANNVIWHQ-GNLLSSDSWKEALDGVTA  124 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~~------~~---~~~~~~~i~-~Dl~d~~~~~~~~~~~d~  124 (286)
                      +++|.|+|+ |.+|..++..|+..|+ +|.++++++++...      ..   .....++.. .|      . ++++++|+
T Consensus         7 ~~kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~t~d------~-~a~~~aDi   78 (324)
T 3gvi_A            7 RNKIALIGS-GMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTGAND------Y-AAIEGADV   78 (324)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESS------G-GGGTTCSE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEEeCC------H-HHHCCCCE
Confidence            468999998 9999999999999998 99999998765210      00   011222221 22      2 57899999


Q ss_pred             EEEccccCCCc----chhhhhhhHHHHHHHHHHHHcCCCEEEEEec
Q 023205          125 VISCVGGFGSN----SYMYKINGTANINAIRAASEKGVKRFVYISA  166 (286)
Q Consensus       125 vi~~a~~~~~~----~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss  166 (286)
                      ||.++|....+    ...+..|......+++.+.+....-++.+-|
T Consensus        79 VIiaag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvt  124 (324)
T 3gvi_A           79 VIVTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKKYAPEAFVICIT  124 (324)
T ss_dssp             EEECCSCCCC-----CHHHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             EEEccCcCCCCCCCHHHHHHhhHHHHHHHHHHHHHHCCCeEEEecC
Confidence            99999864322    2456678888888888888876554443333

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=97.29  E-value=0.00036  Score=59.90  Aligned_cols=76  Identities=24%  Similarity=0.258  Sum_probs=50.8

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCC-HhHHHHHhc--CCCEEEEcccc
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLS-SDSWKEALD--GVTAVISCVGG  131 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d-~~~~~~~~~--~~d~vi~~a~~  131 (286)
                      ..++|||+||+|.+|..+++.+...|.+|+++++++++.........-.++..+ .+ .+.+.+...  ++|+||+++|.
T Consensus       159 ~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~v~~~~-~~~~~~v~~~~~~~g~Dvvid~~g~  237 (342)
T 4eye_A          159 AGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKSVGADIVLPLE-EGWAKAVREATGGAGVDMVVDPIGG  237 (342)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEEEESS-TTHHHHHHHHTTTSCEEEEEESCC-
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEecCc-hhHHHHHHHHhCCCCceEEEECCch
Confidence            367899999999999999999999999999999976553111101111233333 22 233444443  59999999885

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=97.28  E-value=0.00011  Score=63.79  Aligned_cols=73  Identities=21%  Similarity=0.224  Sum_probs=53.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc--cccCCceeEEeccCCCHhHHHHHhcCCCEEEEccccC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGF  132 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~--~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~~  132 (286)
                      .++|+|+|+ |.+|..+++.+...|.+|++++|++++...  +.....+..+   ..+.+++.+.+.++|+||++++..
T Consensus       167 ~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~DvVI~~~~~~  241 (361)
T 1pjc_A          167 PGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVELL---YSNSAEIETAVAEADLLIGAVLVP  241 (361)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSEEE---ECCHHHHHHHHHTCSEEEECCCCT
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCceeEee---eCCHHHHHHHHcCCCEEEECCCcC
Confidence            479999998 999999999999999999999998654211  1111122222   234566777888999999998753

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=97.28  E-value=0.00072  Score=57.29  Aligned_cols=104  Identities=12%  Similarity=0.105  Sum_probs=69.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCC--Ccccc------c---ccCCceeEEeccCCCHhHHHHHhcCCC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSG--RSSLR------D---SWANNVIWHQGNLLSSDSWKEALDGVT  123 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~-~V~~l~R~~--~~~~~------~---~~~~~~~~i~~Dl~d~~~~~~~~~~~d  123 (286)
                      .++|.|+|+ |.+|..++..|+..|+ +|+++++++  .....      .   ......++...+  |    .+.++++|
T Consensus         8 ~~kv~ViGa-G~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~t~--d----~~a~~~aD   80 (315)
T 3tl2_A            8 RKKVSVIGA-GFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIGTS--D----YADTADSD   80 (315)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEEES--C----GGGGTTCS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEEcC--C----HHHhCCCC
Confidence            468999997 9999999999999998 999999984  22100      0   000112222111  2    24688999


Q ss_pred             EEEEccccCCCc----chhhhhhhHHHHHHHHHHHHcCCCEEEEEec
Q 023205          124 AVISCVGGFGSN----SYMYKINGTANINAIRAASEKGVKRFVYISA  166 (286)
Q Consensus       124 ~vi~~a~~~~~~----~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss  166 (286)
                      +||.++|....+    ...++.|......+++.+.+...+-++.+-|
T Consensus        81 vVIiaag~p~kpg~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vlvvs  127 (315)
T 3tl2_A           81 VVVITAGIARKPGMSRDDLVATNSKIMKSITRDIAKHSPNAIIVVLT  127 (315)
T ss_dssp             EEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             EEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEECC
Confidence            999999865432    3456778888888888888876554444433

>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*

Probab=97.27  E-value=0.002  Score=53.87  Aligned_cols=103  Identities=15%  Similarity=0.069  Sum_probs=71.8

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCC--CeEEEEecCCCcccc------c---ccCCceeEEeccCCCHhHHHHHhcCCCEE
Q 023205           57 EKLLVLGGNGFVGSHICREALDRG--LTVASLSRSGRSSLR------D---SWANNVIWHQGNLLSSDSWKEALDGVTAV  125 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g--~~V~~l~R~~~~~~~------~---~~~~~~~~i~~Dl~d~~~~~~~~~~~d~v  125 (286)
                      |||.|+|+ |+||+.++-.|+.++  .++.+++.+++....      .   ......++...+  |.    +.++++|+|
T Consensus         1 MKV~IiGa-G~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~~--d~----~~~~~aDvV   73 (294)
T 2x0j_A            1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGA--DY----SLLKGSEII   73 (294)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEES--CG----GGGTTCSEE
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccccCCCCCeEecCC--CH----HHhCCCCEE
Confidence            68999995 999999999998887  388888887533110      0   011223333222  22    357899999


Q ss_pred             EEccccCCCc----chhhhhhhHHHHHHHHHHHHcCCCEEEEEec
Q 023205          126 ISCVGGFGSN----SYMYKINGTANINAIRAASEKGVKRFVYISA  166 (286)
Q Consensus       126 i~~a~~~~~~----~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss  166 (286)
                      +..||....+    .+.++.|..-...+++.+.+...+-++.+-|
T Consensus        74 vitAG~prkpGmtR~dLl~~Na~I~~~i~~~i~~~~p~aivlvvs  118 (294)
T 2x0j_A           74 VVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVT  118 (294)
T ss_dssp             EECCCCCCCSSSCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECS
T ss_pred             EEecCCCCCCCCchHHHHHHHHHHHHHHHHHHHhcCCceEEEEec
Confidence            9999965432    4667889988899999999887765655555

>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*

Probab=97.26  E-value=0.0012  Score=49.09  Aligned_cols=86  Identities=15%  Similarity=0.128  Sum_probs=56.4

Q ss_pred             CCeEEEEcCC---ChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccccC
Q 023205           56 SEKLLVLGGN---GFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGF  132 (286)
Q Consensus        56 ~~~VlVtGat---G~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~~  132 (286)
                      +++|.|.|++   |.+|..+++.|.+.|++|+.++..  ..  +.  .++..       ..++.++.+.+|.++-+..+ 
T Consensus        22 p~~iaVVGas~~~g~~G~~~~~~l~~~G~~v~~Vnp~--~~--~i--~G~~~-------y~sl~~l~~~vDlvvi~vp~-   87 (144)
T 2d59_A           22 YKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPK--YE--EV--LGRKC-------YPSVLDIPDKIEVVDLFVKP-   87 (144)
T ss_dssp             CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTT--CS--EE--TTEEC-------BSSGGGCSSCCSEEEECSCH-
T ss_pred             CCEEEEEccCCCCCchHHHHHHHHHHCCCEEEEECCC--CC--eE--CCeec-------cCCHHHcCCCCCEEEEEeCH-
Confidence            4689999998   899999999999999986655433  21  10  12221       11233334578999888533 


Q ss_pred             CCcchhhhhhhHHHHHHHHHHHHcCCCEEEEEec
Q 023205          133 GSNSYMYKINGTANINAIRAASEKGVKRFVYISA  166 (286)
Q Consensus       133 ~~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss  166 (286)
                                 .....+++.|.+.|++.+++.++
T Consensus        88 -----------~~~~~vv~~~~~~gi~~i~~~~g  110 (144)
T 2d59_A           88 -----------KLTMEYVEQAIKKGAKVVWFQYN  110 (144)
T ss_dssp             -----------HHHHHHHHHHHHHTCSEEEECTT
T ss_pred             -----------HHHHHHHHHHHHcCCCEEEECCC
Confidence                       23446677888889987765433

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=97.26  E-value=0.0033  Score=53.39  Aligned_cols=103  Identities=16%  Similarity=0.127  Sum_probs=70.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCCCcccc------cc---cCCceeEEeccCCCHhHHHHHhcCCCEE
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSLR------DS---WANNVIWHQGNLLSSDSWKEALDGVTAV  125 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~~------~~---~~~~~~~i~~Dl~d~~~~~~~~~~~d~v  125 (286)
                      +++|.|+|+ |.+|..++..|+..+. +|.++++++++...      ..   .....++...+  |    .++++++|+|
T Consensus         5 ~~kI~iiGa-G~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t~--d----~~a~~~aDvV   77 (321)
T 3p7m_A            5 RKKITLVGA-GNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGTN--D----YKDLENSDVV   77 (321)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEES--C----GGGGTTCSEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEcC--C----HHHHCCCCEE
Confidence            468999995 9999999999999887 99999998765211      00   01123332111  2    2578899999


Q ss_pred             EEccccCCCc----chhhhhhhHHHHHHHHHHHHcCCC-EEEEEe
Q 023205          126 ISCVGGFGSN----SYMYKINGTANINAIRAASEKGVK-RFVYIS  165 (286)
Q Consensus       126 i~~a~~~~~~----~~~~~~~~~~~~~l~~~a~~~~v~-~~v~~S  165 (286)
                      |.++|....+    .+.+..|......+++.+.+.... .++.+|
T Consensus        78 Ii~ag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvt  122 (321)
T 3p7m_A           78 IVTAGVPRKPGMSRDDLLGINIKVMQTVGEGIKHNCPNAFVICIT  122 (321)
T ss_dssp             EECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             EEcCCcCCCCCCCHHHHHHHhHHHHHHHHHHHHHHCCCcEEEEec
Confidence            9999865332    244567888888888888887755 444443

>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}

Probab=97.26  E-value=0.00028  Score=60.44  Aligned_cols=153  Identities=16%  Similarity=0.074  Sum_probs=88.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC-------eEEEEecCCCcc-c-------ccccCC-ceeEEeccCCCHhHHHHHh
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGL-------TVASLSRSGRSS-L-------RDSWAN-NVIWHQGNLLSSDSWKEAL  119 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~-------~V~~l~R~~~~~-~-------~~~~~~-~~~~i~~Dl~d~~~~~~~~  119 (286)
                      ..||.|+||+|.||+.|+-.|.....       ++.+++..+... .       .....+ ....+.++     +..+++
T Consensus        24 ~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~~~~~~~~~~~~-----~~~~a~   98 (345)
T 4h7p_A           24 AVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCAFPLLDKVVVTA-----DPRVAF   98 (345)
T ss_dssp             CEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTTCTTEEEEEEES-----CHHHHT
T ss_pred             CCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcCccCCCcEEEcC-----ChHHHh
Confidence            34899999999999999988877542       677777654321 0       010111 12222221     245689


Q ss_pred             cCCCEEEEccccCCCc----chhhhhhhHHHHHHHHHHHHcC-CC-EEEEEecC----Cc-------CCCCccccchH--
Q 023205          120 DGVTAVISCVGGFGSN----SYMYKINGTANINAIRAASEKG-VK-RFVYISAA----DF-------GVANYLLQGYY--  180 (286)
Q Consensus       120 ~~~d~vi~~a~~~~~~----~~~~~~~~~~~~~l~~~a~~~~-v~-~~v~~Ss~----~~-------~~~~~~~~~y~--  180 (286)
                      +++|+||-+||....+    .+.++.|......+.+...+.. .. .++.+|-.    .|       |.+ ++...-+  
T Consensus        99 ~~advVvi~aG~prkpGmtR~DLl~~Na~I~~~~~~~i~~~a~~~~~vlvvsNPvd~~~~i~~~~~~g~~-~~r~i~~~t  177 (345)
T 4h7p_A           99 DGVAIAIMCGAFPRKAGMERKDLLEMNARIFKEQGEAIAAVAASDCRVVVVGNPANTNALILLKSAQGKL-NPRHVTAMT  177 (345)
T ss_dssp             TTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHHHHHTTTCS-CGGGEEECC
T ss_pred             CCCCEEEECCCCCCCCCCCHHHHHHHhHHHHHHHHHHHHhhccCceEEEEeCCCcchHHHHHHHHccCCC-Ccceeeecc
Confidence            9999999999975433    4567888888888888887754 22 34444432    01       111 1111111  


Q ss_pred             -HHHHHHHHHHHHhCCCcEEEEeeCeeecCCCCCc
Q 023205          181 -EGKRAAETELLTRYPYGGVILRPGFIYGTRTVGG  214 (286)
Q Consensus       181 -~sK~~~E~~~~~~~g~~~~ilRp~~v~g~~~~~~  214 (286)
                       ..-.....++.+..|++..-++-..|+|......
T Consensus       178 ~LDs~R~~~~la~~~~v~~~~V~~~~V~G~HG~t~  212 (345)
T 4h7p_A          178 RLDHNRALSLLARKAGVPVSQVRNVIIWGNHSSTQ  212 (345)
T ss_dssp             HHHHHHHHHHHHHHHTSCGGGEECCEEEBCSSTTC
T ss_pred             chhHHHHHHHHHHHHCcChhheecceeecCCCCeE
Confidence             1111223334456777777777666777655433

>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}

Probab=97.25  E-value=0.00037  Score=62.13  Aligned_cols=97  Identities=15%  Similarity=0.178  Sum_probs=58.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc--cc----cCCcee-EE-----eccCCCHhHHHHHhcCCC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DS----WANNVI-WH-----QGNLLSSDSWKEALDGVT  123 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~--~~----~~~~~~-~i-----~~Dl~d~~~~~~~~~~~d  123 (286)
                      .|+|.|.|+ |++|..++..|.+.|++|++.+|++++...  ..    ..+++. .+     .+.+.-..++.++++++|
T Consensus         2 ~mkI~VIG~-G~vG~~lA~~La~~G~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~t~d~~ea~~~aD   80 (450)
T 3gg2_A            2 SLDIAVVGI-GYVGLVSATCFAELGANVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRFGTEIEQAVPEAD   80 (450)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEEESCHHHHGGGCS
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEEECCHHHHHhcCC
Confidence            468999995 999999999999999999999998654211  10    001110 00     011111123566788999


Q ss_pred             EEEEccccCCCcchhhhhhhHHHHHHHHHHHH
Q 023205          124 AVISCVGGFGSNSYMYKINGTANINAIRAASE  155 (286)
Q Consensus       124 ~vi~~a~~~~~~~~~~~~~~~~~~~l~~~a~~  155 (286)
                      +||.+.+......  -..+......+++...+
T Consensus        81 vViiaVptp~~~~--~~~dl~~v~~v~~~i~~  110 (450)
T 3gg2_A           81 IIFIAVGTPAGED--GSADMSYVLDAARSIGR  110 (450)
T ss_dssp             EEEECCCCCBCTT--SSBCCHHHHHHHHHHHH
T ss_pred             EEEEEcCCCcccC--CCcChHHHHHHHHHHHh
Confidence            9999986542211  13344444444444443

>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A

Probab=97.24  E-value=0.0018  Score=56.33  Aligned_cols=69  Identities=16%  Similarity=0.190  Sum_probs=55.5

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEE
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVIS  127 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~  127 (286)
                      ++++|+|.|+ |.+|+.+++.+.+.|++|++++.++.......   .-+++..|+.|.+.+.++.+.+|+|..
T Consensus        11 ~~~~IlIlG~-G~lg~~la~aa~~lG~~viv~d~~~~~p~~~~---ad~~~~~~~~d~~~l~~~~~~~dvi~~   79 (377)
T 3orq_A           11 FGATIGIIGG-GQLGKMMAQSAQKMGYKVVVLDPSEDCPCRYV---AHEFIQAKYDDEKALNQLGQKCDVITY   79 (377)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCTTCTTGGG---SSEEEECCTTCHHHHHHHHHHCSEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCCChhhhh---CCEEEECCCCCHHHHHHHHHhCCccee
Confidence            4679999996 99999999999999999999988765422221   124667899999999999999998854

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=97.23  E-value=0.00024  Score=61.01  Aligned_cols=97  Identities=21%  Similarity=0.167  Sum_probs=62.6

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHh---HHHHHh--cCCCEEEEcc
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSD---SWKEAL--DGVTAVISCV  129 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~---~~~~~~--~~~d~vi~~a  129 (286)
                      ..++|||+|++|.+|..+++.+...|++|++++|++++..... .-+...+ .|..+.+   .+.+..  .++|+||+++
T Consensus       166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~-~~ga~~~-~d~~~~~~~~~~~~~~~~~~~d~vi~~~  243 (343)
T 2eih_A          166 PGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAK-ALGADET-VNYTHPDWPKEVRRLTGGKGADKVVDHT  243 (343)
T ss_dssp             TTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HHTCSEE-EETTSTTHHHHHHHHTTTTCEEEEEESS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-hcCCCEE-EcCCcccHHHHHHHHhCCCCceEEEECC
Confidence            4579999999999999999999999999999999765421110 0112221 3555433   333443  2689999999


Q ss_pred             ccCCCcchhhhhhhHHHHHHHHHHHHcCCCEEEEEecC
Q 023205          130 GGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAA  167 (286)
Q Consensus       130 ~~~~~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~  167 (286)
                      |. ..           ....++.++..|  +++.+++.
T Consensus       244 g~-~~-----------~~~~~~~l~~~G--~~v~~g~~  267 (343)
T 2eih_A          244 GA-LY-----------FEGVIKATANGG--RIAIAGAS  267 (343)
T ss_dssp             CS-SS-----------HHHHHHHEEEEE--EEEESSCC
T ss_pred             CH-HH-----------HHHHHHhhccCC--EEEEEecC
Confidence            82 11           123344544444  78888764

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...

Probab=97.22  E-value=0.0032  Score=53.57  Aligned_cols=105  Identities=15%  Similarity=0.081  Sum_probs=71.7

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCC--eEEEEecCCCcccc------cc--cCCceeEEeccCCCHhHHHHHhcCCCE
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGL--TVASLSRSGRSSLR------DS--WANNVIWHQGNLLSSDSWKEALDGVTA  124 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~--~V~~l~R~~~~~~~------~~--~~~~~~~i~~Dl~d~~~~~~~~~~~d~  124 (286)
                      ..++|.|+|+ |.+|..++..|+.+|.  +|++++++.++...      ..  ......++..+  |.    +.++++|+
T Consensus        18 ~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~~--d~----~~~~~aDi   90 (331)
T 4aj2_A           18 PQNKITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSSK--DY----SVTANSKL   90 (331)
T ss_dssp             CSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEECS--SG----GGGTTEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEcC--CH----HHhCCCCE
Confidence            3579999997 9999999999999986  89999987543111      00  11122233222  22    25889999


Q ss_pred             EEEccccCCC----cchhhhhhhHHHHHHHHHHHHcCCCEEEEEec
Q 023205          125 VISCVGGFGS----NSYMYKINGTANINAIRAASEKGVKRFVYISA  166 (286)
Q Consensus       125 vi~~a~~~~~----~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss  166 (286)
                      ||.++|....    ..+.++.|......+.+.+.+....-++.+-|
T Consensus        91 Vvi~aG~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~vlvvt  136 (331)
T 4aj2_A           91 VIITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKYSPQCKLLIVS  136 (331)
T ss_dssp             EEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             EEEccCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            9999986532    23567888888888899888876554444433

>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*

Probab=97.22  E-value=0.0013  Score=55.91  Aligned_cols=103  Identities=11%  Similarity=0.115  Sum_probs=68.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCC--CeEEEEecCCCcccc------c---ccCCceeEEeccCCCHhHHHHHhcCCCE
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRG--LTVASLSRSGRSSLR------D---SWANNVIWHQGNLLSSDSWKEALDGVTA  124 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g--~~V~~l~R~~~~~~~------~---~~~~~~~~i~~Dl~d~~~~~~~~~~~d~  124 (286)
                      +++|.|+|+ |.+|..++..|+.++  .+|.++++++++...      .   .....+++.. |  +    .++++++|+
T Consensus         6 ~~KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~-~--~----~~a~~~aDv   77 (317)
T 3d0o_A            6 GNKVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVKA-G--E----YSDCHDADL   77 (317)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEEE-C--C----GGGGTTCSE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEEe-C--C----HHHhCCCCE
Confidence            469999998 999999999999887  488888877532110      0   0112333332 2  2    356889999


Q ss_pred             EEEccccCCCc----chhhhhhhHHHHHHHHHHHHcCCCEEEEEec
Q 023205          125 VISCVGGFGSN----SYMYKINGTANINAIRAASEKGVKRFVYISA  166 (286)
Q Consensus       125 vi~~a~~~~~~----~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss  166 (286)
                      ||.+++....+    ......|......+++.+.+....-++.+.|
T Consensus        78 Vvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~t  123 (317)
T 3d0o_A           78 VVICAGAAQKPGETRLDLVSKNLKIFKSIVGEVMASKFDGIFLVAT  123 (317)
T ss_dssp             EEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             EEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEec
Confidence            99999875432    1334666677777788888776655555554

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=97.19  E-value=0.00053  Score=57.74  Aligned_cols=74  Identities=23%  Similarity=0.234  Sum_probs=51.5

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEcccc
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG  131 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~  131 (286)
                      ...+|+|+|++|.+|..+++.+...|.+|++++|++++..... .-+...+ .|..+.+++.+.++++|+||+ +|.
T Consensus       125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~ga~~~-~~~~~~~~~~~~~~~~d~vid-~g~  198 (302)
T 1iz0_A          125 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPL-ALGAEEA-ATYAEVPERAKAWGGLDLVLE-VRG  198 (302)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHH-HTTCSEE-EEGGGHHHHHHHTTSEEEEEE-CSC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-hcCCCEE-EECCcchhHHHHhcCceEEEE-CCH
Confidence            3579999999999999999999999999999999765532111 1122221 244441334444588999999 875

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=97.19  E-value=0.0015  Score=58.40  Aligned_cols=97  Identities=18%  Similarity=0.323  Sum_probs=70.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc-cccCCceeEEeccCCCHhHHHHH-hcCCCEEEEccccCC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-DSWANNVIWHQGNLLSSDSWKEA-LDGVTAVISCVGGFG  133 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~-~~~~~~~~~i~~Dl~d~~~~~~~-~~~~d~vi~~a~~~~  133 (286)
                      .++|+|.|| |.+|.++++.| +++++|.++.+++++... ....++..++.||-+|++-+++. ++++|+++-+.+.  
T Consensus       235 ~~~v~I~Gg-G~ig~~lA~~L-~~~~~v~iIE~d~~r~~~la~~l~~~~Vi~GD~td~~~L~ee~i~~~D~~ia~T~~--  310 (461)
T 4g65_A          235 YRRIMIVGG-GNIGASLAKRL-EQTYSVKLIERNLQRAEKLSEELENTIVFCGDAADQELLTEENIDQVDVFIALTNE--  310 (461)
T ss_dssp             CCEEEEECC-SHHHHHHHHHH-TTTSEEEEEESCHHHHHHHHHHCTTSEEEESCTTCHHHHHHTTGGGCSEEEECCSC--
T ss_pred             ccEEEEEcc-hHHHHHHHHHh-hhcCceEEEecCHHHHHHHHHHCCCceEEeccccchhhHhhcCchhhcEEEEcccC--
Confidence            468999997 99999999987 456899999988765321 11235788999999999988765 6789999977432  


Q ss_pred             CcchhhhhhhHHHHHHHHHHHHcCCCEEEEEe
Q 023205          134 SNSYMYKINGTANINAIRAASEKGVKRFVYIS  165 (286)
Q Consensus       134 ~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~S  165 (286)
                       +    +.|+..    ...|++.|++++|-.-
T Consensus       311 -D----e~Ni~~----~llAk~~gv~kvIa~v  333 (461)
T 4g65_A          311 -D----ETNIMS----AMLAKRMGAKKVMVLI  333 (461)
T ss_dssp             -H----HHHHHH----HHHHHHTTCSEEEEEC
T ss_pred             -c----HHHHHH----HHHHHHcCCccccccc
Confidence             1    233332    3467788998877543

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=97.18  E-value=0.00068  Score=58.76  Aligned_cols=98  Identities=14%  Similarity=0.122  Sum_probs=65.6

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccccCCC
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFGS  134 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~~~~  134 (286)
                      ...+|||+|+ |.+|..+++.+...|.+|+++++++++.......-+...+ .|..+.+.+.++..++|+||.++|....
T Consensus       187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~lGa~~v-~~~~~~~~~~~~~~~~D~vid~~g~~~~  264 (366)
T 1yqd_A          187 PGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGADSF-LVSRDQEQMQAAAGTLDGIIDTVSAVHP  264 (366)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTSCCSEE-EETTCHHHHHHTTTCEEEEEECCSSCCC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCceE-EeccCHHHHHHhhCCCCEEEECCCcHHH
Confidence            4579999996 9999999999999999999999886553211101122221 3566777777777789999999875321


Q ss_pred             cchhhhhhhHHHHHHHHHHHHcCCCEEEEEecC
Q 023205          135 NSYMYKINGTANINAIRAASEKGVKRFVYISAA  167 (286)
Q Consensus       135 ~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~  167 (286)
                      .           ...++.++..|  +++.+++.
T Consensus       265 ~-----------~~~~~~l~~~G--~iv~~g~~  284 (366)
T 1yqd_A          265 L-----------LPLFGLLKSHG--KLILVGAP  284 (366)
T ss_dssp             S-----------HHHHHHEEEEE--EEEECCCC
T ss_pred             H-----------HHHHHHHhcCC--EEEEEccC
Confidence            1           12244444333  78888773

>3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A

Probab=97.18  E-value=0.00067  Score=58.07  Aligned_cols=91  Identities=12%  Similarity=0.119  Sum_probs=53.6

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCC---eEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccccCC
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGL---TVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFG  133 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~---~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~~~  133 (286)
                      ++|.|.||||++|..+++.|.++.+   ++..+.-..+.-..-.+. +.....-|+.+     ..++++|+||.|++.. 
T Consensus         2 ~~VaIvGatG~vG~el~~lL~~h~fp~~el~~~~s~~~aG~~~~~~-~~~~~~~~~~~-----~~~~~~Dvvf~a~~~~-   74 (344)
T 3tz6_A            2 LSIGIVGATGQVGQVMRTLLDERDFPASAVRFFASARSQGRKLAFR-GQEIEVEDAET-----ADPSGLDIALFSAGSA-   74 (344)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTSSCEEEET-TEEEEEEETTT-----SCCTTCSEEEECSCHH-
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCceEEEEEECcccCCCceeec-CCceEEEeCCH-----HHhccCCEEEECCChH-
Confidence            5899999999999999999988743   456555332211110011 11222122221     2357899999997641 


Q ss_pred             CcchhhhhhhHHHHHHHHHHHHcCCCEEEEEec
Q 023205          134 SNSYMYKINGTANINAIRAASEKGVKRFVYISA  166 (286)
Q Consensus       134 ~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss  166 (286)
                                 .....+..+.+.|+ ++|-.|+
T Consensus        75 -----------~s~~~a~~~~~~G~-~vID~Sa   95 (344)
T 3tz6_A           75 -----------MSKVQAPRFAAAGV-TVIDNSS   95 (344)
T ss_dssp             -----------HHHHHHHHHHHTTC-EEEECSS
T ss_pred             -----------HHHHHHHHHHhCCC-EEEECCC
Confidence                       22344555556776 5777776

>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}

Probab=97.17  E-value=0.00074  Score=59.93  Aligned_cols=95  Identities=19%  Similarity=0.303  Sum_probs=63.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCC-C---eEEEEecCCCcccccccCCceeEEeccCCC--H-hHHHHHhcCCCEEEEc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRG-L---TVASLSRSGRSSLRDSWANNVIWHQGNLLS--S-DSWKEALDGVTAVISC  128 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g-~---~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d--~-~~~~~~~~~~d~vi~~  128 (286)
                      .++|+|.| .|.||+.+++.|.++. +   +|++.+.+....... ...++++...++++  . +.+.+++++.|+||++
T Consensus        13 ~~rVlIIG-aGgVG~~va~lla~~~dv~~~~I~vaD~~~~~~~~~-~~~g~~~~~~~Vdadnv~~~l~aLl~~~DvVIN~   90 (480)
T 2ph5_A           13 KNRFVILG-FGCVGQALMPLIFEKFDIKPSQVTIIAAEGTKVDVA-QQYGVSFKLQQITPQNYLEVIGSTLEENDFLIDV   90 (480)
T ss_dssp             CSCEEEEC-CSHHHHHHHHHHHHHBCCCGGGEEEEESSCCSCCHH-HHHTCEEEECCCCTTTHHHHTGGGCCTTCEEEEC
T ss_pred             CCCEEEEC-cCHHHHHHHHHHHhCCCCceeEEEEeccchhhhhHH-hhcCCceeEEeccchhHHHHHHHHhcCCCEEEEC
Confidence            46899999 5999999999999974 4   688887665432111 11145666666643  3 3356677777999986


Q ss_pred             cccCCCcchhhhhhhHHHHHHHHHHHHcCCCEEEEEecC
Q 023205          129 VGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAA  167 (286)
Q Consensus       129 a~~~~~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~  167 (286)
                      +.+.            ....++++|.++|+   -|++++
T Consensus        91 s~~~------------~~l~Im~acleaGv---~YlDTa  114 (480)
T 2ph5_A           91 SIGI------------SSLALIILCNQKGA---LYINAA  114 (480)
T ss_dssp             CSSS------------CHHHHHHHHHHHTC---EEEESS
T ss_pred             Cccc------------cCHHHHHHHHHcCC---CEEECC
Confidence            5332            23367899999987   355554

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=97.16  E-value=0.0022  Score=52.42  Aligned_cols=97  Identities=13%  Similarity=0.102  Sum_probs=64.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCCCc-------------------ccc-----cccCC--ceeEEecc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRS-------------------SLR-----DSWAN--NVIWHQGN  108 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~-~V~~l~R~~~~-------------------~~~-----~~~~~--~~~~i~~D  108 (286)
                      .++|+|.|+ |.+|+++++.|...|. ++++++++.-.                   ...     ....+  .++.+..+
T Consensus        31 ~~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~~  109 (249)
T 1jw9_B           31 DSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNAL  109 (249)
T ss_dssp             HCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSC
T ss_pred             CCeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEecc
Confidence            458999996 9999999999999996 89999988511                   000     00112  34555555


Q ss_pred             CCCHhHHHHHhcCCCEEEEccccCCCcchhhhhhhHHHHHHHHHHHHcCCCEEEEEec
Q 023205          109 LLSSDSWKEALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISA  166 (286)
Q Consensus       109 l~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss  166 (286)
                      +. .+.+.+.++++|+||.+....           .....+.+.|++.+++ +|..+.
T Consensus       110 ~~-~~~~~~~~~~~DvVi~~~d~~-----------~~~~~l~~~~~~~~~p-~i~~~~  154 (249)
T 1jw9_B          110 LD-DAELAALIAEHDLVLDCTDNV-----------AVRNQLNAGCFAAKVP-LVSGAA  154 (249)
T ss_dssp             CC-HHHHHHHHHTSSEEEECCSSH-----------HHHHHHHHHHHHHTCC-EEEEEE
T ss_pred             CC-HhHHHHHHhCCCEEEEeCCCH-----------HHHHHHHHHHHHcCCC-EEEeee
Confidence            64 456777889999999985321           1123456677777764 555544

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=97.16  E-value=0.00041  Score=58.36  Aligned_cols=73  Identities=15%  Similarity=0.107  Sum_probs=52.1

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCCCcccc--cccCCceeEEeccCCCHhHHHHHhcCCCEEEEcccc
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSLR--DSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG  131 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~~--~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~  131 (286)
                      ..++|+|+|+ |.+|+.++..|++.|. +|++.+|+.++...  +.......    +..+.+++.+.+.++|+||++.+.
T Consensus       140 ~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~----~~~~~~~~~~~~~~aDivIn~t~~  214 (297)
T 2egg_A          140 DGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRS----AYFSLAEAETRLAEYDIIINTTSV  214 (297)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSC----CEECHHHHHHTGGGCSEEEECSCT
T ss_pred             CCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccC----ceeeHHHHHhhhccCCEEEECCCC
Confidence            4579999997 8899999999999997 99999998654211  11111100    122335677788899999999875


Q ss_pred             C
Q 023205          132 F  132 (286)
Q Consensus       132 ~  132 (286)
                      .
T Consensus       215 ~  215 (297)
T 2egg_A          215 G  215 (297)
T ss_dssp             T
T ss_pred             C
Confidence            4

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=97.16  E-value=0.00057  Score=56.77  Aligned_cols=68  Identities=19%  Similarity=0.112  Sum_probs=50.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEcccc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG  131 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~  131 (286)
                      .++++|+|+ |.+|+.++..|.+.|. +|++.+|+.++.....  ..+..+     ..+++.+++.++|+||++.+.
T Consensus       117 ~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la--~~~~~~-----~~~~~~~~~~~aDiVInaTp~  185 (277)
T 3don_A          117 DAYILILGA-GGASKGIANELYKIVRPTLTVANRTMSRFNNWS--LNINKI-----NLSHAESHLDEFDIIINTTPA  185 (277)
T ss_dssp             GCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCC--SCCEEE-----CHHHHHHTGGGCSEEEECCC-
T ss_pred             CCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHH--Hhcccc-----cHhhHHHHhcCCCEEEECccC
Confidence            578999997 8999999999999998 8999999976532211  122222     345677778899999998754

>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*

Probab=97.15  E-value=0.0034  Score=53.19  Aligned_cols=104  Identities=13%  Similarity=0.245  Sum_probs=67.6

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCC--eEEEEecCCCcccc------c---ccCCceeEEeccCCCHhHHHHHhcCCC
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGL--TVASLSRSGRSSLR------D---SWANNVIWHQGNLLSSDSWKEALDGVT  123 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~--~V~~l~R~~~~~~~------~---~~~~~~~~i~~Dl~d~~~~~~~~~~~d  123 (286)
                      ++++|.|+|+ |.+|..++..|+..+.  +|++++++++....      .   .....+++.. |  +    .++++++|
T Consensus         5 ~~~kI~IIGa-G~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~~-~--~----~~al~~aD   76 (316)
T 1ldn_A            5 GGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWH-G--D----YDDCRDAD   76 (316)
T ss_dssp             TSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEE-C--C----GGGTTTCS
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEEc-C--c----HHHhCCCC
Confidence            3579999998 9999999999988774  89999998642111      0   0011333332 2  2    24688999


Q ss_pred             EEEEccccCCCc----chhhhhhhHHHHHHHHHHHHcCCCEEEEEec
Q 023205          124 AVISCVGGFGSN----SYMYKINGTANINAIRAASEKGVKRFVYISA  166 (286)
Q Consensus       124 ~vi~~a~~~~~~----~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss  166 (286)
                      +||.+++....+    ......|......+++.+.+....-++++-|
T Consensus        77 vViia~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~~iv~t  123 (316)
T 1ldn_A           77 LVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMASGFQGLFLVAT  123 (316)
T ss_dssp             EEEECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHHTCCSEEEECS
T ss_pred             EEEEcCCCCCCCCCCHHHHHHcChHHHHHHHHHHHHHCCCCEEEEeC
Confidence            999999865322    2334556666667778777766554444444

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=97.15  E-value=0.00031  Score=60.63  Aligned_cols=75  Identities=21%  Similarity=0.198  Sum_probs=50.4

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHh---HHHHHh-cCCCEEEEccc
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSD---SWKEAL-DGVTAVISCVG  130 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~---~~~~~~-~~~d~vi~~a~  130 (286)
                      ..++|||+||+|.+|..+++.+...|.+|++++|++++...... -+...+ .|..+.+   .+.+.. .++|+||+|+|
T Consensus       167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-lGa~~~-~~~~~~~~~~~~~~~~~~g~Dvvid~~g  244 (353)
T 4dup_A          167 EGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACER-LGAKRG-INYRSEDFAAVIKAETGQGVDIILDMIG  244 (353)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-HTCSEE-EETTTSCHHHHHHHHHSSCEEEEEESCC
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-cCCCEE-EeCCchHHHHHHHHHhCCCceEEEECCC
Confidence            45799999999999999999999999999999988654211100 111111 2343332   232222 36999999987


Q ss_pred             c
Q 023205          131 G  131 (286)
Q Consensus       131 ~  131 (286)
                      .
T Consensus       245 ~  245 (353)
T 4dup_A          245 A  245 (353)
T ss_dssp             G
T ss_pred             H
Confidence            5

>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1

Probab=97.15  E-value=0.0028  Score=53.74  Aligned_cols=146  Identities=13%  Similarity=0.172  Sum_probs=85.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC--eEEEEecCCCcccc------cc--cCCceeEEeccCCCHhHHHHHhcCCCEE
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGL--TVASLSRSGRSSLR------DS--WANNVIWHQGNLLSSDSWKEALDGVTAV  125 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~--~V~~l~R~~~~~~~------~~--~~~~~~~i~~Dl~d~~~~~~~~~~~d~v  125 (286)
                      ++||.|+|+ |.+|..++-.|+..+.  ++.+++++.++...      ..  ....+++.. |  +    .++++++|+|
T Consensus         5 ~~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~~-~--~----~~a~~~aDvV   76 (318)
T 1ez4_A            5 HQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYS-G--E----YSDCKDADLV   76 (318)
T ss_dssp             BCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEE-C--C----GGGGTTCSEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEEE-C--C----HHHhCCCCEE
Confidence            468999998 9999999999998875  89999987543210      00  112344432 2  2    3468999999


Q ss_pred             EEccccCCCc----chhhhhhhHHHHHHHHHHHHcCCCEEEEEec-CC---------c-CCCCccccchHH--HHHHHHH
Q 023205          126 ISCVGGFGSN----SYMYKINGTANINAIRAASEKGVKRFVYISA-AD---------F-GVANYLLQGYYE--GKRAAET  188 (286)
Q Consensus       126 i~~a~~~~~~----~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss-~~---------~-~~~~~~~~~y~~--sK~~~E~  188 (286)
                      |..++....+    ......|......+++.+++....-++.+-| ..         + +.+....-+.+.  .-.....
T Consensus        77 ii~ag~~~~~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv~~~t~~~~k~s~~p~~rviG~gt~LD~~R~~~  156 (318)
T 1ez4_A           77 VITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAANPVDILTYATWKFSGFPKERVIGSGTSLDSSRLRV  156 (318)
T ss_dssp             EECCCC----------CHHHHHHHHHHHHHHHHHTTCCSEEEECSSSHHHHHHHHHHHHCCCGGGEEECTTHHHHHHHHH
T ss_pred             EECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHHcCCCHHHEEeccccchHHHHHH
Confidence            9999865322    2445677777778888888876554444433 10         0 111111112211  1223334


Q ss_pred             HHHHhCCCcEEEEeeCeeecCC
Q 023205          189 ELLTRYPYGGVILRPGFIYGTR  210 (286)
Q Consensus       189 ~~~~~~g~~~~ilRp~~v~g~~  210 (286)
                      .+.+..|++..-++ ..++|..
T Consensus       157 ~la~~lgv~~~~v~-~~v~G~H  177 (318)
T 1ez4_A          157 ALGKQFNVDPRSVD-AYIMGEH  177 (318)
T ss_dssp             HHHHHHTCCGGGEE-CCEESSS
T ss_pred             HHHHHhCcChhHEE-EEEeccc
Confidence            44455666666666 7788864

>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*

Probab=97.14  E-value=0.0038  Score=57.33  Aligned_cols=68  Identities=15%  Similarity=0.263  Sum_probs=58.1

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHH-hcCCCEEEEccc
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEA-LDGVTAVISCVG  130 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~-~~~~d~vi~~a~  130 (286)
                      ++|+|.|+ |.+|.++++.|.+.|++|++++++++.....     ..++.+|.+|++.++++ ++++|.++-+.+
T Consensus       349 ~~viIiG~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~-----~~~i~gD~t~~~~L~~agi~~ad~vi~~~~  417 (565)
T 4gx0_A          349 ELIFIIGH-GRIGCAAAAFLDRKPVPFILIDRQESPVCND-----HVVVYGDATVGQTLRQAGIDRASGIIVTTN  417 (565)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCEEEEESSCCSSCCS-----SCEEESCSSSSTHHHHHTTTSCSEEEECCS
T ss_pred             CCEEEECC-CHHHHHHHHHHHHCCCCEEEEECChHHHhhc-----CCEEEeCCCCHHHHHhcCccccCEEEEECC
Confidence            78999997 9999999999999999999999998763321     28999999999998775 567999998864

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=97.12  E-value=0.00048  Score=59.05  Aligned_cols=75  Identities=15%  Similarity=0.200  Sum_probs=50.8

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCH---hHHHHHhc--CCCEEEEcc
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSS---DSWKEALD--GVTAVISCV  129 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~---~~~~~~~~--~~d~vi~~a  129 (286)
                      ..++|||+|++|.+|..+++.+...|.+|+++++++++...... -+...+ .|..+.   +.+.+...  ++|+||+|+
T Consensus       144 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-lga~~~-~~~~~~~~~~~~~~~~~~~g~Dvvid~~  221 (340)
T 3gms_A          144 RNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLR-LGAAYV-IDTSTAPLYETVMELTNGIGADAAIDSI  221 (340)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH-HTCSEE-EETTTSCHHHHHHHHTTTSCEEEEEESS
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-CCCcEE-EeCCcccHHHHHHHHhCCCCCcEEEECC
Confidence            45799999999999999999998889999999998765321110 112211 234333   23333332  689999998


Q ss_pred             cc
Q 023205          130 GG  131 (286)
Q Consensus       130 ~~  131 (286)
                      |.
T Consensus       222 g~  223 (340)
T 3gms_A          222 GG  223 (340)
T ss_dssp             CH
T ss_pred             CC
Confidence            75

>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}

Probab=97.12  E-value=0.0036  Score=52.75  Aligned_cols=100  Identities=16%  Similarity=0.159  Sum_probs=62.9

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCC--eEEEEecCCCcccc------cc--cCCceeEEeccCCCHhHHHHHhcCCCEEE
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGL--TVASLSRSGRSSLR------DS--WANNVIWHQGNLLSSDSWKEALDGVTAVI  126 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~--~V~~l~R~~~~~~~------~~--~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi  126 (286)
                      |+|.|+|+ |.+|..++..|+..|+  +|.++++++++...      ..  .....++..   .+.    +.++++|+||
T Consensus         1 mkI~VIGa-G~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~---~~~----~a~~~aDvVI   72 (304)
T 2v6b_A            1 MKVGVVGT-GFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWH---GGH----SELADAQVVI   72 (304)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEEE---ECG----GGGTTCSEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEE---CCH----HHhCCCCEEE
Confidence            48999998 9999999999999998  99999998643110      00  011223322   122    4688999999


Q ss_pred             EccccCCCc----chhhhhhhHHHHHHHHHHHHcCCCEEEEE
Q 023205          127 SCVGGFGSN----SYMYKINGTANINAIRAASEKGVKRFVYI  164 (286)
Q Consensus       127 ~~a~~~~~~----~~~~~~~~~~~~~l~~~a~~~~v~~~v~~  164 (286)
                      .+++....+    ......|......+++.+.+.....++.+
T Consensus        73 i~~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~~~vi~  114 (304)
T 2v6b_A           73 LTAGANQKPGESRLDLLEKNADIFRELVPQITRAAPDAVLLV  114 (304)
T ss_dssp             ECC------------CHHHHHHHHHHHHHHHHHHCSSSEEEE
T ss_pred             EcCCCCCCCCCcHHHHHHhHHHHHHHHHHHHHHhCCCeEEEE
Confidence            999754321    23445677777777887777654444443

>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}

Probab=97.12  E-value=0.00077  Score=50.31  Aligned_cols=87  Identities=15%  Similarity=0.103  Sum_probs=55.6

Q ss_pred             CCeEEEEcCC---ChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccccC
Q 023205           56 SEKLLVLGGN---GFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGF  132 (286)
Q Consensus        56 ~~~VlVtGat---G~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~~  132 (286)
                      +++|.|.|++   |.+|..+++.|++.|++|+..+++....  +.  .++..+ .++      .++.+.+|+++-+..+ 
T Consensus        13 p~~IavIGas~~~g~~G~~~~~~L~~~G~~v~~vnp~~~g~--~i--~G~~~~-~sl------~el~~~~Dlvii~vp~-   80 (145)
T 2duw_A           13 TRTIALVGASDKPDRPSYRVMKYLLDQGYHVIPVSPKVAGK--TL--LGQQGY-ATL------ADVPEKVDMVDVFRNS-   80 (145)
T ss_dssp             CCCEEEESCCSCTTSHHHHHHHHHHHHTCCEEEECSSSTTS--EE--TTEECC-SST------TTCSSCCSEEECCSCS-
T ss_pred             CCEEEEECcCCCCCChHHHHHHHHHHCCCEEEEeCCccccc--cc--CCeecc-CCH------HHcCCCCCEEEEEeCH-
Confidence            4579999998   8999999999999999987776654101  00  122211 222      2333578999988542 


Q ss_pred             CCcchhhhhhhHHHHHHHHHHHHcCCCEEEEEe
Q 023205          133 GSNSYMYKINGTANINAIRAASEKGVKRFVYIS  165 (286)
Q Consensus       133 ~~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~S  165 (286)
                                 .....+++.+.+.+++.++..+
T Consensus        81 -----------~~v~~v~~~~~~~g~~~i~i~~  102 (145)
T 2duw_A           81 -----------EAAWGVAQEAIAIGAKTLWLQL  102 (145)
T ss_dssp             -----------THHHHHHHHHHHHTCCEEECCT
T ss_pred             -----------HHHHHHHHHHHHcCCCEEEEcC
Confidence                       1223445666668888766544

>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*

Probab=97.12  E-value=0.00052  Score=60.98  Aligned_cols=74  Identities=20%  Similarity=0.260  Sum_probs=47.8

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCccccccc------CCcee-EE-----eccCCCHhHHHHHhcCCCE
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSW------ANNVI-WH-----QGNLLSSDSWKEALDGVTA  124 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~------~~~~~-~i-----~~Dl~d~~~~~~~~~~~d~  124 (286)
                      |+|.|.| +|++|..++..|.+.|++|++++|++++......      .+++. .+     .+.+....++.++++++|+
T Consensus         1 mkI~VIG-~G~vG~~~A~~la~~G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~g~l~~t~~~~~~~~~aDv   79 (436)
T 1mv8_A            1 MRISIFG-LGYVGAVCAGCLSARGHEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSGTTDFKKAVLDSDV   79 (436)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHHTCSE
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHhhcccCceEEeCCHHHHhccCCE
Confidence            4799999 5999999999999999999999998654211000      00000 00     0111111234556778999


Q ss_pred             EEEcccc
Q 023205          125 VISCVGG  131 (286)
Q Consensus       125 vi~~a~~  131 (286)
                      ||.+.+.
T Consensus        80 viiaVpt   86 (436)
T 1mv8_A           80 SFICVGT   86 (436)
T ss_dssp             EEECCCC
T ss_pred             EEEEcCC
Confidence            9999864

>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*

Probab=97.11  E-value=0.0032  Score=53.60  Aligned_cols=147  Identities=11%  Similarity=0.139  Sum_probs=85.4

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCC--eEEEEecCCCcccc------cc--cCCceeEEeccCCCHhHHHHHhcCCCE
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGL--TVASLSRSGRSSLR------DS--WANNVIWHQGNLLSSDSWKEALDGVTA  124 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~--~V~~l~R~~~~~~~------~~--~~~~~~~i~~Dl~d~~~~~~~~~~~d~  124 (286)
                      +.+||.|+|+ |.+|..++-.|+..+.  ++.+++++.++...      ..  ....+++.. |  +    .++++++|+
T Consensus         8 ~~~KI~IiGa-G~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~-~--~----~~a~~~aDv   79 (326)
T 2zqz_A            8 DHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIYS-A--E----YSDAKDADL   79 (326)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEE-C--C----GGGGGGCSE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEEE-C--C----HHHhCCCCE
Confidence            3579999998 9999999999988775  89999987543211      00  112333332 2  2    345889999


Q ss_pred             EEEccccCCCc----chhhhhhhHHHHHHHHHHHHcCCCEEEEEec-CC---------c-CCCCccccchHH--HHHHHH
Q 023205          125 VISCVGGFGSN----SYMYKINGTANINAIRAASEKGVKRFVYISA-AD---------F-GVANYLLQGYYE--GKRAAE  187 (286)
Q Consensus       125 vi~~a~~~~~~----~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss-~~---------~-~~~~~~~~~y~~--sK~~~E  187 (286)
                      ||..++....+    ......|......+++.+++....-++.+-| ..         + +.+....-+.+.  .-....
T Consensus        80 Vii~ag~~~k~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv~~~t~~~~k~s~~p~~rviG~gt~LD~~R~~  159 (326)
T 2zqz_A           80 VVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAANPVDILTYATWKLSGFPKNRVVGSGTSLDTARFR  159 (326)
T ss_dssp             EEECCCCC-----CHHHHHHHHHHHHHHHHHHHHHHTCCSEEEECSSSHHHHHHHHHHHHCCCGGGEEECTTHHHHHHHH
T ss_pred             EEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHHcCCCHHHEEEccccchHHHHH
Confidence            99999865332    2344566677777788887776544444433 10         0 111111112211  122333


Q ss_pred             HHHHHhCCCcEEEEeeCeeecCC
Q 023205          188 TELLTRYPYGGVILRPGFIYGTR  210 (286)
Q Consensus       188 ~~~~~~~g~~~~ilRp~~v~g~~  210 (286)
                      ..+.+..|++..-++ ..++|.+
T Consensus       160 ~~la~~lgv~~~~v~-~~v~G~H  181 (326)
T 2zqz_A          160 QSIAEMVNVDARSVH-AYIMGEH  181 (326)
T ss_dssp             HHHHHHHTCCGGGEE-CCEEBSS
T ss_pred             HHHHHHhCCChhheE-EEEeccc
Confidence            444455666666666 6788864

>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*

Probab=97.10  E-value=0.0058  Score=51.90  Aligned_cols=100  Identities=15%  Similarity=0.216  Sum_probs=64.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCCCcccc------cc---cCCceeEEeccCCCHhHHHHHhcCCCEE
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSLR------DS---WANNVIWHQGNLLSSDSWKEALDGVTAV  125 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~~------~~---~~~~~~~i~~Dl~d~~~~~~~~~~~d~v  125 (286)
                      +++|.|+|| |.+|..++..|+..|+ +|.++++++++...      ..   .....++...  +|   + ++++++|+|
T Consensus         4 ~~kI~VIGa-G~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t--~d---~-~al~~aD~V   76 (322)
T 1t2d_A            4 KAKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGS--NT---Y-DDLAGADVV   76 (322)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEE--CC---G-GGGTTCSEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEEC--CC---H-HHhCCCCEE
Confidence            468999998 9999999999999997 88888888654211      00   0112222210  12   3 568899999


Q ss_pred             EEccccCCCc---------chhhhhhhHHHHHHHHHHHHcCCCEEE
Q 023205          126 ISCVGGFGSN---------SYMYKINGTANINAIRAASEKGVKRFV  162 (286)
Q Consensus       126 i~~a~~~~~~---------~~~~~~~~~~~~~l~~~a~~~~v~~~v  162 (286)
                      |.+++....+         ......|......+++.+.+...+-++
T Consensus        77 i~a~g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~~p~a~i  122 (322)
T 1t2d_A           77 IVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFI  122 (322)
T ss_dssp             EECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEE
T ss_pred             EEeCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHCCCeEE
Confidence            9999754321         223344555666677777666544343

>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}

Probab=97.10  E-value=0.00021  Score=60.40  Aligned_cols=74  Identities=16%  Similarity=0.147  Sum_probs=47.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEe--------ccCCCHhHHHHHhcCCCEEEE
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQ--------GNLLSSDSWKEALDGVTAVIS  127 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~--------~Dl~d~~~~~~~~~~~d~vi~  127 (286)
                      +|+|.|.|+ |.+|..++..|.+.|++|++++|+++.... ....++....        .+..+.+++.++++++|+||.
T Consensus         3 ~m~i~iiG~-G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~   80 (316)
T 2ew2_A            3 AMKIAIAGA-GAMGSRLGIMLHQGGNDVTLIDQWPAHIEA-IRKNGLIADFNGEEVVANLPIFSPEEIDHQNEQVDLIIA   80 (316)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHH-HHHHCEEEEETTEEEEECCCEECGGGCCTTSCCCSEEEE
T ss_pred             CCeEEEECc-CHHHHHHHHHHHhCCCcEEEEECCHHHHHH-HHhCCEEEEeCCCeeEecceeecchhhcccCCCCCEEEE
Confidence            578999996 999999999999999999999997643211 0011222211        122233333334558999998


Q ss_pred             cccc
Q 023205          128 CVGG  131 (286)
Q Consensus       128 ~a~~  131 (286)
                      +..+
T Consensus        81 ~v~~   84 (316)
T 2ew2_A           81 LTKA   84 (316)
T ss_dssp             CSCH
T ss_pred             Eecc
Confidence            8653

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=97.07  E-value=0.00032  Score=61.08  Aligned_cols=73  Identities=21%  Similarity=0.191  Sum_probs=54.1

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCccc--ccccCCceeEEeccCCCHhHHHHHhcCCCEEEEcccc
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSL--RDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG  131 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~--~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~  131 (286)
                      ..++|+|+|+ |.+|..+++.+...|.+|++.+|++++..  .+.....+.   .+..+.+++.+.+.++|+||.+++.
T Consensus       167 ~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g~~~~---~~~~~~~~l~~~l~~aDvVi~~~~~  241 (377)
T 2vhw_A          167 EPADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLRQLDAEFCGRIH---TRYSSAYELEGAVKRADLVIGAVLV  241 (377)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSSE---EEECCHHHHHHHHHHCSEEEECCCC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcCCeeE---eccCCHHHHHHHHcCCCEEEECCCc
Confidence            4679999998 99999999999999999999999865421  111111221   2334566788888899999998764

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=97.07  E-value=0.00049  Score=57.42  Aligned_cols=73  Identities=10%  Similarity=0.141  Sum_probs=52.0

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCCCcccc--ccc---CCceeEEeccCCCHhHHHHHhcCCCEEEEc
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSLR--DSW---ANNVIWHQGNLLSSDSWKEALDGVTAVISC  128 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~~--~~~---~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~  128 (286)
                      ..++++|+|+ |.+|+.++..|.+.|. +|++.+|+.++...  +..   ...+.+...++   +++.+.+.++|+||++
T Consensus       126 ~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~---~~l~~~l~~~DiVIna  201 (283)
T 3jyo_A          126 KLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDA---RGIEDVIAAADGVVNA  201 (283)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECS---TTHHHHHHHSSEEEEC
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCH---HHHHHHHhcCCEEEEC
Confidence            4679999998 9999999999999997 79999998765321  100   11233333343   3466677889999999


Q ss_pred             ccc
Q 023205          129 VGG  131 (286)
Q Consensus       129 a~~  131 (286)
                      .+.
T Consensus       202 Tp~  204 (283)
T 3jyo_A          202 TPM  204 (283)
T ss_dssp             SST
T ss_pred             CCC
Confidence            753

>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A

Probab=97.07  E-value=0.0016  Score=57.56  Aligned_cols=69  Identities=23%  Similarity=0.218  Sum_probs=54.9

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEE
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVIS  127 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~  127 (286)
                      ++++|+|.|+ |.+|+.+++.+.+.|++|++++.++.......   .-+.+..|+.|.+.+.++.+++|+|+.
T Consensus        34 ~~~~IlIlG~-G~lg~~~~~aa~~lG~~v~v~d~~~~~p~~~~---ad~~~~~~~~d~~~l~~~a~~~D~V~~  102 (419)
T 4e4t_A           34 PGAWLGMVGG-GQLGRMFCFAAQSMGYRVAVLDPDPASPAGAV---ADRHLRAAYDDEAALAELAGLCEAVST  102 (419)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCTTCHHHHH---SSEEECCCTTCHHHHHHHHHHCSEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEECCCCcCchhhh---CCEEEECCcCCHHHHHHHHhcCCEEEE
Confidence            4679999996 99999999999999999999987654322111   124567899999999999999999984

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=97.05  E-value=0.00077  Score=58.33  Aligned_cols=97  Identities=23%  Similarity=0.185  Sum_probs=60.6

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCH---hHHHHHh-cCCCEEEEccc
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSS---DSWKEAL-DGVTAVISCVG  130 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~---~~~~~~~-~~~d~vi~~a~  130 (286)
                      ..++|||+||+|.+|..+++.+...|++|++++|++++..... .-+...+ .|..+.   +.+.+.. .++|+||+++|
T Consensus       163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~-~~Ga~~~-~~~~~~~~~~~~~~~~~~g~D~vid~~g  240 (362)
T 2c0c_A          163 EGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLK-SLGCDRP-INYKTEPVGTVLKQEYPEGVDVVYESVG  240 (362)
T ss_dssp             TTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HTTCSEE-EETTTSCHHHHHHHHCTTCEEEEEECSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH-HcCCcEE-EecCChhHHHHHHHhcCCCCCEEEECCC
Confidence            3579999999999999999999999999999998754421110 1122211 233332   2222222 36899999987


Q ss_pred             cCCCcchhhhhhhHHHHHHHHHHHHcCCCEEEEEecC
Q 023205          131 GFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAA  167 (286)
Q Consensus       131 ~~~~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~  167 (286)
                      .     .       .....++.++..|  +++.+++.
T Consensus       241 ~-----~-------~~~~~~~~l~~~G--~iv~~g~~  263 (362)
T 2c0c_A          241 G-----A-------MFDLAVDALATKG--RLIVIGFI  263 (362)
T ss_dssp             T-----H-------HHHHHHHHEEEEE--EEEECCCG
T ss_pred             H-----H-------HHHHHHHHHhcCC--EEEEEeCC
Confidence            4     1       1223344544444  78888763

>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A

Probab=97.05  E-value=0.0012  Score=49.00  Aligned_cols=88  Identities=11%  Similarity=0.000  Sum_probs=55.5

Q ss_pred             CCeEEEEcCC---ChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccccC
Q 023205           56 SEKLLVLGGN---GFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGF  132 (286)
Q Consensus        56 ~~~VlVtGat---G~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~~  132 (286)
                      +++|.|.|++   |.+|..+++.|.+.|++|+.++.+...  .+.  .++..+       .++.++-+.+|.++.+..+ 
T Consensus        13 p~~vaVvGas~~~g~~G~~~~~~l~~~G~~v~~vnp~~~~--~~i--~G~~~~-------~sl~el~~~vDlavi~vp~-   80 (140)
T 1iuk_A           13 AKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVNPRFQG--EEL--FGEEAV-------ASLLDLKEPVDILDVFRPP-   80 (140)
T ss_dssp             CCEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEECGGGTT--SEE--TTEECB-------SSGGGCCSCCSEEEECSCH-
T ss_pred             CCEEEEECCCCCCCChHHHHHHHHHHCCCEEEEeCCCccc--CcC--CCEEec-------CCHHHCCCCCCEEEEEeCH-
Confidence            4689999998   899999999999999986655433101  010  122211       2233334478998888543 


Q ss_pred             CCcchhhhhhhHHHHHHHHHHHHcCCCEEEEEec
Q 023205          133 GSNSYMYKINGTANINAIRAASEKGVKRFVYISA  166 (286)
Q Consensus       133 ~~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss  166 (286)
                                 .....+++.|.+.|++.+++.++
T Consensus        81 -----------~~~~~v~~~~~~~gi~~i~~~~g  103 (140)
T 1iuk_A           81 -----------SALMDHLPEVLALRPGLVWLQSG  103 (140)
T ss_dssp             -----------HHHTTTHHHHHHHCCSCEEECTT
T ss_pred             -----------HHHHHHHHHHHHcCCCEEEEcCC
Confidence                       12234467777889987765443

>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1

Probab=97.03  E-value=0.01  Score=50.36  Aligned_cols=103  Identities=14%  Similarity=0.047  Sum_probs=69.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC--eEEEEecCCCcccc------c--ccCCceeEE-eccCCCHhHHHHHhcCCCE
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGL--TVASLSRSGRSSLR------D--SWANNVIWH-QGNLLSSDSWKEALDGVTA  124 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~--~V~~l~R~~~~~~~------~--~~~~~~~~i-~~Dl~d~~~~~~~~~~~d~  124 (286)
                      .++|.|+|+ |.+|..++..|+..|.  +|.+++++.++...      .  .......+. ..|+      + .++++|+
T Consensus        21 ~~kV~ViGa-G~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~------~-~~~daDi   92 (330)
T 3ldh_A           21 YNKITVVGC-DAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSGKDY------S-VSAGSKL   92 (330)
T ss_dssp             CCEEEEEST-THHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEESSS------C-SCSSCSE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEcCCH------H-HhCCCCE
Confidence            579999998 9999999999999886  89999987543111      0  011122222 2232      2 3889999


Q ss_pred             EEEccccCCCc----chhhhhhhHHHHHHHHHHHHcCCCEEEEEec
Q 023205          125 VISCVGGFGSN----SYMYKINGTANINAIRAASEKGVKRFVYISA  166 (286)
Q Consensus       125 vi~~a~~~~~~----~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss  166 (286)
                      ||.++|....+    .+.+..|......+++.+.+.+..-++.+-|
T Consensus        93 VIitaG~p~kpG~tR~dll~~N~~I~k~i~~~I~k~~P~a~ilvvt  138 (330)
T 3ldh_A           93 VVITAGARQQEGESRLNLVQRNVNIFKFIIPNIVKHSPDCLKELHP  138 (330)
T ss_dssp             EEECCSCCCCSSCCTTGGGHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             EEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhCCCceEEeCC
Confidence            99999875432    3556778777888888888876554444443

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=97.02  E-value=0.00065  Score=57.83  Aligned_cols=74  Identities=22%  Similarity=0.180  Sum_probs=50.6

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc-cccCCceeEEeccCCCH---hHHHHHhc--CCCEEEEc
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-DSWANNVIWHQGNLLSS---DSWKEALD--GVTAVISC  128 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~-~~~~~~~~~i~~Dl~d~---~~~~~~~~--~~d~vi~~  128 (286)
                      ..++|||+||+|.+|...++.+...|.+|+++++++++... .... .-.++  |..+.   +.+.+...  ++|+||++
T Consensus       140 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~G-a~~~~--~~~~~~~~~~~~~~~~~~g~Dvvid~  216 (325)
T 3jyn_A          140 PGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAKALG-AWETI--DYSHEDVAKRVLELTDGKKCPVVYDG  216 (325)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHT-CSEEE--ETTTSCHHHHHHHHTTTCCEEEEEES
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcC-CCEEE--eCCCccHHHHHHHHhCCCCceEEEEC
Confidence            46799999999999999999999999999999987654211 1111 11222  34333   33334433  68999999


Q ss_pred             ccc
Q 023205          129 VGG  131 (286)
Q Consensus       129 a~~  131 (286)
                      +|.
T Consensus       217 ~g~  219 (325)
T 3jyn_A          217 VGQ  219 (325)
T ss_dssp             SCG
T ss_pred             CCh
Confidence            875

>2yv3_A Aspartate-semialdehyde dehydrogenase; aspartate pathway, structural genomics; 2.70A {Thermus thermophilus}

Probab=97.02  E-value=0.001  Score=56.80  Aligned_cols=90  Identities=19%  Similarity=0.155  Sum_probs=52.6

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCeE---EEEe-cCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccccC
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGLTV---ASLS-RSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGF  132 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~~V---~~l~-R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~~  132 (286)
                      ++|.|.||+|++|+.+++.|.++++.+   ..+. ++.....-......+.+...|   ++   . + ++|+||.|.|..
T Consensus         1 mkVaI~GAtG~iG~~llr~L~~~~~~~~~l~~~~s~~~~g~~l~~~g~~i~v~~~~---~~---~-~-~~DvV~~a~g~~   72 (331)
T 2yv3_A            1 MRVAVVGATGAVGREILKVLEARNFPLSELRLYASPRSAGVRLAFRGEEIPVEPLP---EG---P-L-PVDLVLASAGGG   72 (331)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCCCSCCEEEECGGGSSCEEEETTEEEEEEECC---SS---C-C-CCSEEEECSHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEeeccccCCCEEEEcCceEEEEeCC---hh---h-c-CCCEEEECCCcc
Confidence            479999999999999999999776643   3222 111110000001123333323   22   2 3 899999997652


Q ss_pred             CCcchhhhhhhHHHHHHHHHHHHcCCCEEEEEecC
Q 023205          133 GSNSYMYKINGTANINAIRAASEKGVKRFVYISAA  167 (286)
Q Consensus       133 ~~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~  167 (286)
                                  .....+....+.|+ ++|-.|+.
T Consensus        73 ------------~s~~~a~~~~~~G~-~vId~s~~   94 (331)
T 2yv3_A           73 ------------ISRAKALVWAEGGA-LVVDNSSA   94 (331)
T ss_dssp             ------------HHHHHHHHHHHTTC-EEEECSSS
T ss_pred             ------------chHHHHHHHHHCCC-EEEECCCc
Confidence                        22234555556776 67777774

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=97.02  E-value=0.00074  Score=58.05  Aligned_cols=74  Identities=23%  Similarity=0.256  Sum_probs=51.2

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHC-CCeEEEEecCCCcccc-cccCCceeEEeccCCCHh---HHHHHh--cCCCEEEE
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDR-GLTVASLSRSGRSSLR-DSWANNVIWHQGNLLSSD---SWKEAL--DGVTAVIS  127 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~-g~~V~~l~R~~~~~~~-~~~~~~~~~i~~Dl~d~~---~~~~~~--~~~d~vi~  127 (286)
                      ..++|+|+|++|.+|..+++.+... |.+|+++++++++... ...  +...+ .|..+.+   .+.+..  .++|+||+
T Consensus       170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~~--g~~~~-~~~~~~~~~~~~~~~~~~~~~d~vi~  246 (347)
T 1jvb_A          170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRA--GADYV-INASMQDPLAEIRRITESKGVDAVID  246 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHH--TCSEE-EETTTSCHHHHHHHHTTTSCEEEEEE
T ss_pred             CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHh--CCCEE-ecCCCccHHHHHHHHhcCCCceEEEE
Confidence            4578999999999999999999998 9999999987644211 111  11111 2444433   345554  36999999


Q ss_pred             cccc
Q 023205          128 CVGG  131 (286)
Q Consensus       128 ~a~~  131 (286)
                      ++|.
T Consensus       247 ~~g~  250 (347)
T 1jvb_A          247 LNNS  250 (347)
T ss_dssp             SCCC
T ss_pred             CCCC
Confidence            9875

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=97.01  E-value=0.001  Score=56.75  Aligned_cols=97  Identities=18%  Similarity=0.118  Sum_probs=61.0

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCH---hHHHHHh--cCCCEEEEcc
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSS---DSWKEAL--DGVTAVISCV  129 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~---~~~~~~~--~~~d~vi~~a  129 (286)
                      ..++|||+||+|.+|...++.+...|.+|+++++++++.........-.++  |..+.   +.+.+..  .++|+||+++
T Consensus       148 ~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~~--~~~~~~~~~~~~~~~~~~g~D~vid~~  225 (334)
T 3qwb_A          148 KGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKEYGAEYLI--NASKEDILRQVLKFTNGKGVDASFDSV  225 (334)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEE--ETTTSCHHHHHHHHTTTSCEEEEEECC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEEE--eCCCchHHHHHHHHhCCCCceEEEECC
Confidence            467999999999999999999999999999999976542111111111222  33332   3344443  2589999998


Q ss_pred             ccCCCcchhhhhhhHHHHHHHHHHHHcCCCEEEEEecC
Q 023205          130 GGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAA  167 (286)
Q Consensus       130 ~~~~~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~  167 (286)
                      |..            .....++.++..|  +++.++..
T Consensus       226 g~~------------~~~~~~~~l~~~G--~iv~~G~~  249 (334)
T 3qwb_A          226 GKD------------TFEISLAALKRKG--VFVSFGNA  249 (334)
T ss_dssp             GGG------------GHHHHHHHEEEEE--EEEECCCT
T ss_pred             ChH------------HHHHHHHHhccCC--EEEEEcCC
Confidence            751            1122344444443  78887763

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=97.00  E-value=0.00099  Score=56.27  Aligned_cols=76  Identities=14%  Similarity=0.232  Sum_probs=52.9

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCCCc---ccc--ccc--CCceeEEeccCCCHhHHHHHhcCCCEEE
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRS---SLR--DSW--ANNVIWHQGNLLSSDSWKEALDGVTAVI  126 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~-~V~~l~R~~~~---~~~--~~~--~~~~~~i~~Dl~d~~~~~~~~~~~d~vi  126 (286)
                      ..++++|+|+ |.+|+.++..|.+.|. +|++.+|+.++   ...  +..  ..+..+...++.+.+.+.+.+.++|+||
T Consensus       147 ~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~~l~~~DiII  225 (312)
T 3t4e_A          147 RGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTEALASADILT  225 (312)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHHCSEEE
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhhhHhhccCceEEE
Confidence            4679999997 9999999999999997 89999999432   111  000  0122333445556544566778899999


Q ss_pred             Ecccc
Q 023205          127 SCVGG  131 (286)
Q Consensus       127 ~~a~~  131 (286)
                      ++.+.
T Consensus       226 NaTp~  230 (312)
T 3t4e_A          226 NGTKV  230 (312)
T ss_dssp             ECSST
T ss_pred             ECCcC
Confidence            98754

>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima}

Probab=97.00  E-value=0.0039  Score=54.18  Aligned_cols=69  Identities=22%  Similarity=0.283  Sum_probs=54.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISC  128 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~  128 (286)
                      |++|+|+|+ |..|+.+++.+.+.|++|++++.++...... ..+  ..+..|..|.+.+.++.+++|.|+..
T Consensus         1 M~~Ililg~-g~~g~~~~~a~~~~G~~v~~~~~~~~~~~~~-~~~--~~~~~~~~d~~~l~~~~~~~d~v~~~   69 (380)
T 3ax6_A            1 MKKIGIIGG-GQLGKMMTLEAKKMGFYVIVLDPTPRSPAGQ-VAD--EQIVAGFFDSERIEDLVKGSDVTTYD   69 (380)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSTTCTTGG-GSS--EEEECCTTCHHHHHHHHHTCSEEEES
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCchhh-hCc--eEEECCCCCHHHHHHHHhcCCEEEec
Confidence            468999997 8999999999999999999998765432111 111  35678899999998888899998864

>4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A*

Probab=96.99  E-value=0.00064  Score=58.62  Aligned_cols=92  Identities=16%  Similarity=0.170  Sum_probs=55.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCC-CeEEEEecCCCc--ccccccC-----------CceeEEeccCCCHhHHHHHhcC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRG-LTVASLSRSGRS--SLRDSWA-----------NNVIWHQGNLLSSDSWKEALDG  121 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g-~~V~~l~R~~~~--~~~~~~~-----------~~~~~i~~Dl~d~~~~~~~~~~  121 (286)
                      +.+|.|.||||++|..+++.|.++. .++..+..+.+.  .......           ....+...   +++    .+.+
T Consensus         7 ~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~~saGk~~~~~~p~~~~~~~~~~~~~~~v~~~---~~~----~~~~   79 (359)
T 4dpl_A            7 TLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGKGSVGKPYGEVVRWQTVGQVPKEIADMEIKPT---DPK----LMDD   79 (359)
T ss_dssp             CEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEESTTTTSBHHHHCCCCSSSCCCHHHHTCBCEEC---CGG----GCTT
T ss_pred             CCeEEEECCCCHHHHHHHHHHHhCCCceEEEEECchhcCCChhHhcccccccccccccccceEEeC---CHH----HhcC
Confidence            4689999999999999999877765 367666543321  1111100           01112111   222    2478


Q ss_pred             CCEEEEccccCCCcchhhhhhhHHHHHHHHHHHHcCCCEEEEEecC
Q 023205          122 VTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAA  167 (286)
Q Consensus       122 ~d~vi~~a~~~~~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~  167 (286)
                      +|+||.|.+...            ...++..+.+.|+ ++|-+|+.
T Consensus        80 vDvvf~a~p~~~------------s~~~a~~~~~~G~-~vIDlSa~  112 (359)
T 4dpl_A           80 VDIIFSPLPQGA------------AGPVEEQFAKEGF-PVISNSPD  112 (359)
T ss_dssp             CCEEEECCCTTT------------HHHHHHHHHHTTC-EEEECSST
T ss_pred             CCEEEECCChHH------------HHHHHHHHHHCCC-EEEEcCCC
Confidence            999999976521            1234555566787 67777773

>4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A*

Probab=96.99  E-value=0.00064  Score=58.62  Aligned_cols=92  Identities=16%  Similarity=0.170  Sum_probs=55.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCC-CeEEEEecCCCc--ccccccC-----------CceeEEeccCCCHhHHHHHhcC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRG-LTVASLSRSGRS--SLRDSWA-----------NNVIWHQGNLLSSDSWKEALDG  121 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g-~~V~~l~R~~~~--~~~~~~~-----------~~~~~i~~Dl~d~~~~~~~~~~  121 (286)
                      +.+|.|.||||++|..+++.|.++. .++..+..+.+.  .......           ....+...   +++    .+.+
T Consensus         7 ~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~~saGk~~~~~~p~~~~~~~~~~~~~~~v~~~---~~~----~~~~   79 (359)
T 4dpk_A            7 TLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGKGSVGKPYGEVVRWQTVGQVPKEIADMEIKPT---DPK----LMDD   79 (359)
T ss_dssp             CEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEESTTTTSBHHHHCCCCSSSCCCHHHHTCBCEEC---CGG----GCTT
T ss_pred             CCeEEEECCCCHHHHHHHHHHHhCCCceEEEEECchhcCCChhHhcccccccccccccccceEEeC---CHH----HhcC
Confidence            4689999999999999999877765 367666543321  1111100           01112111   222    2478


Q ss_pred             CCEEEEccccCCCcchhhhhhhHHHHHHHHHHHHcCCCEEEEEecC
Q 023205          122 VTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAA  167 (286)
Q Consensus       122 ~d~vi~~a~~~~~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~  167 (286)
                      +|+||.|.+...            ...++..+.+.|+ ++|-+|+.
T Consensus        80 vDvvf~a~p~~~------------s~~~a~~~~~~G~-~vIDlSa~  112 (359)
T 4dpk_A           80 VDIIFSPLPQGA------------AGPVEEQFAKEGF-PVISNSPD  112 (359)
T ss_dssp             CCEEEECCCTTT------------HHHHHHHHHHTTC-EEEECSST
T ss_pred             CCEEEECCChHH------------HHHHHHHHHHCCC-EEEEcCCC
Confidence            999999976521            1234555566787 67777773

>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}

Probab=96.99  E-value=0.0082  Score=51.11  Aligned_cols=100  Identities=18%  Similarity=0.167  Sum_probs=64.9

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCCCcccc------cc-----cCCceeEEeccCCCHhHHHHHhcCC
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSLR------DS-----WANNVIWHQGNLLSSDSWKEALDGV  122 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~~------~~-----~~~~~~~i~~Dl~d~~~~~~~~~~~  122 (286)
                      ++++|.|+|| |.+|..++..|...|+ +|++.+++++....      ..     ...++... .|      + ++++++
T Consensus        13 ~~~kI~ViGa-G~vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t-~d------~-~al~~a   83 (328)
T 2hjr_A           13 MRKKISIIGA-GQIGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFGE-NN------Y-EYLQNS   83 (328)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEE-SC------G-GGGTTC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEEC-CC------H-HHHCCC
Confidence            3468999998 9999999999999998 99999998754221      00     01122211 22      3 468899


Q ss_pred             CEEEEccccCCCc----chhhhhhhHHHHHHHHHHHHcCCCEEEE
Q 023205          123 TAVISCVGGFGSN----SYMYKINGTANINAIRAASEKGVKRFVY  163 (286)
Q Consensus       123 d~vi~~a~~~~~~----~~~~~~~~~~~~~l~~~a~~~~v~~~v~  163 (286)
                      |+||-+++....+    ......|......+++.+.+...+-++.
T Consensus        84 D~VI~avg~p~k~g~tr~dl~~~n~~i~~~i~~~i~~~~p~a~vi  128 (328)
T 2hjr_A           84 DVVIITAGVPRKPNMTRSDLLTVNAKIVGSVAENVGKYCPNAFVI  128 (328)
T ss_dssp             SEEEECCSCCCCTTCCSGGGHHHHHHHHHHHHHHHHHHCTTCEEE
T ss_pred             CEEEEcCCCCCCCCCchhhHHhhhHHHHHHHHHHHHHHCCCeEEE
Confidence            9999999754321    1233445556666777776655444443

>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}

Probab=96.97  E-value=0.0012  Score=55.48  Aligned_cols=67  Identities=21%  Similarity=0.197  Sum_probs=41.9

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccc
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVG  130 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~  130 (286)
                      |.+||.++| .|.+|..+++.|++.||+|++.+|++++.... ...+.+..       ++..++++++|+||.+..
T Consensus         4 Ms~kIgfIG-LG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l-~~~G~~~~-------~s~~e~~~~~dvvi~~l~   70 (297)
T 4gbj_A            4 MSEKIAFLG-LGNLGTPIAEILLEAGYELVVWNRTASKAEPL-TKLGATVV-------ENAIDAITPGGIVFSVLA   70 (297)
T ss_dssp             CCCEEEEEC-CSTTHHHHHHHHHHTTCEEEEC-------CTT-TTTTCEEC-------SSGGGGCCTTCEEEECCS
T ss_pred             CCCcEEEEe-cHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHH-HHcCCeEe-------CCHHHHHhcCCceeeecc
Confidence            456899999 59999999999999999999999987763221 11222221       223456667777777754

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}

Probab=96.97  E-value=0.00094  Score=56.51  Aligned_cols=67  Identities=16%  Similarity=0.167  Sum_probs=46.7

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccc
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVG  130 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~  130 (286)
                      .+|+|.|.|. |.+|..+++.|.+.|++|++.+|++++..... ..++.+       ..+..++++++|+||.+..
T Consensus        20 ~m~~I~iIG~-G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~l~-~~g~~~-------~~~~~~~~~~aDvvi~~vp   86 (310)
T 3doj_A           20 HMMEVGFLGL-GIMGKAMSMNLLKNGFKVTVWNRTLSKCDELV-EHGASV-------CESPAEVIKKCKYTIAMLS   86 (310)
T ss_dssp             CSCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSGGGGHHHH-HTTCEE-------CSSHHHHHHHCSEEEECCS
T ss_pred             cCCEEEEECc-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH-HCCCeE-------cCCHHHHHHhCCEEEEEcC
Confidence            4679999985 99999999999999999999999876532111 112221       1234455666787777753

>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*

Probab=96.92  E-value=0.0031  Score=55.36  Aligned_cols=69  Identities=20%  Similarity=0.265  Sum_probs=55.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEE
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVIS  127 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~  127 (286)
                      +++|+|.|+ |.+|+.+++.+.+.|++|++++ ++..... ...+....+.+|+.|.+.+.++.+.+|+|+.
T Consensus        24 ~~~I~ilGg-G~lg~~l~~aa~~lG~~v~~~d-~~~~p~~-~~ad~~~~~~~~~~d~~~l~~~a~~~d~i~~   92 (403)
T 3k5i_A           24 SRKVGVLGG-GQLGRMLVESANRLNIQVNVLD-ADNSPAK-QISAHDGHVTGSFKEREAVRQLAKTCDVVTA   92 (403)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCEEEEEE-STTCTTG-GGCCSSCCEESCTTCHHHHHHHHTTCSEEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEE-CCCCcHH-HhccccceeecCCCCHHHHHHHHHhCCEEEE
Confidence            568999997 8999999999999999999999 6443222 2222235678899999999999999998874

>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1

Probab=96.92  E-value=0.0019  Score=54.58  Aligned_cols=103  Identities=17%  Similarity=0.211  Sum_probs=65.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCC--CeEEEEecCCCccccc--c-------cCCceeEEeccCCCHhHHHHHhcCCCE
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRG--LTVASLSRSGRSSLRD--S-------WANNVIWHQGNLLSSDSWKEALDGVTA  124 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g--~~V~~l~R~~~~~~~~--~-------~~~~~~~i~~Dl~d~~~~~~~~~~~d~  124 (286)
                      ||+|.|+| +|.+|..++..|++.|  ++|++++|+++.....  .       ....+++...|      + +.++++|+
T Consensus         1 m~kI~VIG-aG~~G~~la~~L~~~g~~~~V~l~d~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d------~-~~~~~aDv   72 (309)
T 1hyh_A            1 ARKIGIIG-LGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVIND------W-AALADADV   72 (309)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESC------G-GGGTTCSE
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhCCCCCEEEEEcCCHHHHHHHHHHHHhhhhhcCCCeEEEeCC------H-HHhCCCCE
Confidence            36899999 6999999999999998  7999999986432110  0       01123332222      2 45789999


Q ss_pred             EEEccccCCC----c----chhhhhhhHHHHHHHHHHHHcCCCEEEEEec
Q 023205          125 VISCVGGFGS----N----SYMYKINGTANINAIRAASEKGVKRFVYISA  166 (286)
Q Consensus       125 vi~~a~~~~~----~----~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss  166 (286)
                      ||.+++....    +    ......|......+++.+.+...+.++.+.|
T Consensus        73 Viiav~~~~~~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~~~~~ii~~t  122 (309)
T 1hyh_A           73 VISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGFHGVLVVIS  122 (309)
T ss_dssp             EEECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             EEEecCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEEc
Confidence            9999876432    1    1233455555667777776655443444333

>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1

Probab=96.90  E-value=0.0023  Score=54.39  Aligned_cols=99  Identities=18%  Similarity=0.156  Sum_probs=64.1

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCC--eEEEEecCCCcccccc--------cCCceeEEeccCCCHhHHHHHhcCCCEEE
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGL--TVASLSRSGRSSLRDS--------WANNVIWHQGNLLSSDSWKEALDGVTAVI  126 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~--~V~~l~R~~~~~~~~~--------~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi  126 (286)
                      |+|.|+|+ |.+|..++..|++.|+  +|++++|+++......        .....++..   +|.    +.++++|+||
T Consensus         1 mkI~VIGa-G~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~i~~---~d~----~~~~~aDvVi   72 (319)
T 1a5z_A            1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYA---GDY----ADLKGSDVVI   72 (319)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEE---CCG----GGGTTCSEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHHhhhhhcCCcEEEe---CCH----HHhCCCCEEE
Confidence            47999998 9999999999999998  9999999854321100        001122221   232    3578999999


Q ss_pred             EccccCCCc----chhhhhhhHHHHHHHHHHHHcCCCEEEE
Q 023205          127 SCVGGFGSN----SYMYKINGTANINAIRAASEKGVKRFVY  163 (286)
Q Consensus       127 ~~a~~~~~~----~~~~~~~~~~~~~l~~~a~~~~v~~~v~  163 (286)
                      .+++....+    ......|......+++.+.+.....++.
T Consensus        73 iav~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~ii  113 (319)
T 1a5z_A           73 VAAGVPQKPGETRLQLLGRNARVMKEIARNVSKYAPDSIVI  113 (319)
T ss_dssp             ECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEE
T ss_pred             EccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEE
Confidence            999865432    2334455666667777777655443333

>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*

Probab=96.90  E-value=0.0076  Score=52.52  Aligned_cols=69  Identities=17%  Similarity=0.204  Sum_probs=54.3

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEE
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVIS  127 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~  127 (286)
                      .+++|+|.|+ |.+|+.+++.+.+.|++|++++.++.......   .-..+..|+.|.+.+.++.+.+|+|..
T Consensus        13 ~~k~IlIlG~-G~~g~~la~aa~~~G~~vi~~d~~~~~~~~~~---ad~~~~~~~~d~~~l~~~~~~~dvI~~   81 (389)
T 3q2o_A           13 PGKTIGIIGG-GQLGRMMALAAKEMGYKIAVLDPTKNSPCAQV---ADIEIVASYDDLKAIQHLAEISDVVTY   81 (389)
T ss_dssp             TTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSTTCTTTTT---CSEEEECCTTCHHHHHHHHHTCSEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCCCCchHHh---CCceEecCcCCHHHHHHHHHhCCEeee
Confidence            4679999996 89999999999999999999987754322111   113456889999999999999998854

>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*

Probab=96.88  E-value=0.0042  Score=52.59  Aligned_cols=104  Identities=14%  Similarity=0.111  Sum_probs=64.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC--eEEEEecCCCccc------ccc--cCCceeEEeccCCCHhHHHHHhcCCCEE
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGL--TVASLSRSGRSSL------RDS--WANNVIWHQGNLLSSDSWKEALDGVTAV  125 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~--~V~~l~R~~~~~~------~~~--~~~~~~~i~~Dl~d~~~~~~~~~~~d~v  125 (286)
                      +|+|.|+|+ |.+|..++..|...|+  +|.+++|+.+...      ...  .....++...  .+.    +.++++|+|
T Consensus         7 ~mkI~IiGa-G~vG~~~a~~l~~~g~~~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~----~~~~~aD~V   79 (319)
T 1lld_A            7 PTKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGS--DDP----EICRDADMV   79 (319)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEE--SCG----GGGTTCSEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHhhhhhcCCeEEEeC--CCH----HHhCCCCEE
Confidence            579999998 9999999999999998  9999999853321      000  0012222211  122    356789999


Q ss_pred             EEccccCCCc----chhhhhhhHHHHHHHHHHHHcCCCEEEEEec
Q 023205          126 ISCVGGFGSN----SYMYKINGTANINAIRAASEKGVKRFVYISA  166 (286)
Q Consensus       126 i~~a~~~~~~----~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss  166 (286)
                      |.+++....+    ......|......+++..++.+.+.+|...+
T Consensus        80 ii~v~~~~~~g~~r~~~~~~n~~~~~~~~~~i~~~~~~~~vi~~~  124 (319)
T 1lld_A           80 VITAGPRQKPGQSRLELVGATVNILKAIMPNLVKVAPNAIYMLIT  124 (319)
T ss_dssp             EECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECC
T ss_pred             EECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEec
Confidence            9999754322    2233455555556666666554443443333

>3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans}

Probab=96.88  E-value=0.0038  Score=54.15  Aligned_cols=93  Identities=15%  Similarity=0.160  Sum_probs=55.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCC-CeEEEEe--cCCC-cccccccC-----------CceeEEeccCCCHhHHHHHhc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRG-LTVASLS--RSGR-SSLRDSWA-----------NNVIWHQGNLLSSDSWKEALD  120 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g-~~V~~l~--R~~~-~~~~~~~~-----------~~~~~i~~Dl~d~~~~~~~~~  120 (286)
                      +++|.|.||||++|..+++.|.++. .++..+.  ++.. +...+...           ....+...|.  .+    .++
T Consensus        19 ~~kVaIvGAtG~vG~ell~lL~~hp~~el~~l~aS~~saGk~~~~~~~~~~~~~~p~~~~~~~v~~~~~--~~----~~~   92 (381)
T 3hsk_A           19 VKKAGVLGATGSVGQRFILLLSKHPEFEIHALGASSRSAGKKYKDAASWKQTETLPETEQDIVVQECKP--EG----NFL   92 (381)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTTSBHHHHCCCCCSSCCCHHHHTCBCEESSS--CT----TGG
T ss_pred             ccEEEEECCCChHHHHHHHHHHcCCCceEEEeeccccccCCCHHHhcccccccccccccccceEEeCch--hh----hcc
Confidence            4589999999999999999888776 3675553  3222 21111000           1122222221  10    357


Q ss_pred             CCCEEEEccccCCCcchhhhhhhHHHHHHHHHHHHcCCCEEEEEecC
Q 023205          121 GVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAA  167 (286)
Q Consensus       121 ~~d~vi~~a~~~~~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~  167 (286)
                      ++|+||.|.+..            ....++..+.+.|+ ++|=.|+.
T Consensus        93 ~~Dvvf~alp~~------------~s~~~~~~~~~~G~-~VIDlSa~  126 (381)
T 3hsk_A           93 ECDVVFSGLDAD------------VAGDIEKSFVEAGL-AVVSNAKN  126 (381)
T ss_dssp             GCSEEEECCCHH------------HHHHHHHHHHHTTC-EEEECCST
T ss_pred             cCCEEEECCChh------------HHHHHHHHHHhCCC-EEEEcCCc
Confidence            899999997541            22344566667787 57777773

>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A

Probab=96.87  E-value=0.007  Score=51.27  Aligned_cols=103  Identities=14%  Similarity=0.111  Sum_probs=63.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCCCcccccc---------cCCceeEEeccCCCHhHHHHHhcCCCEE
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSLRDS---------WANNVIWHQGNLLSSDSWKEALDGVTAV  125 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~~~~---------~~~~~~~i~~Dl~d~~~~~~~~~~~d~v  125 (286)
                      +++|.|+|+ |.+|..++..|+..|+ +|++.+++++......         .....++...  .|   + ++++++|+|
T Consensus         4 ~~kI~VIGa-G~~G~~ia~~la~~g~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t--~d---~-~a~~~aDiV   76 (317)
T 2ewd_A            4 RRKIAVIGS-GQIGGNIAYIVGKDNLADVVLFDIAEGIPQGKALDITHSMVMFGSTSKVIGT--DD---Y-ADISGSDVV   76 (317)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEE--SC---G-GGGTTCSEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCchHHHHHHHHHHhhhhhcCCCcEEEEC--CC---H-HHhCCCCEE
Confidence            468999998 9999999999999998 9999999875422100         0001111110  12   3 467899999


Q ss_pred             EEccccCCCcc----hhhhhhhHHHHHHHHHHHHcCCCE-EEEEe
Q 023205          126 ISCVGGFGSNS----YMYKINGTANINAIRAASEKGVKR-FVYIS  165 (286)
Q Consensus       126 i~~a~~~~~~~----~~~~~~~~~~~~l~~~a~~~~v~~-~v~~S  165 (286)
                      |.+++....+.    +....|......+++...+..... ++.+|
T Consensus        77 i~avg~p~~~g~~r~d~~~~~~~i~~~i~~~i~~~~~~~iii~~s  121 (317)
T 2ewd_A           77 IITASIPGRPKDDRSELLFGNARILDSVAEGVKKYCPNAFVICIT  121 (317)
T ss_dssp             EECCCCSSCCSSCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECC
T ss_pred             EEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEeC
Confidence            99997543221    222334444556666666554343 33344

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=96.86  E-value=0.00083  Score=57.12  Aligned_cols=67  Identities=18%  Similarity=0.217  Sum_probs=48.4

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccc
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVG  130 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~  130 (286)
                      .+|+|.|.|. |.+|..+++.|.+.|++|++.+|++++... ....++.+       ..++.++++++|+||-+..
T Consensus        30 ~~~~I~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~-l~~~g~~~-------~~~~~e~~~~aDvVi~~vp   96 (320)
T 4dll_A           30 YARKITFLGT-GSMGLPMARRLCEAGYALQVWNRTPARAAS-LAALGATI-------HEQARAAARDADIVVSMLE   96 (320)
T ss_dssp             CCSEEEEECC-TTTHHHHHHHHHHTTCEEEEECSCHHHHHH-HHTTTCEE-------ESSHHHHHTTCSEEEECCS
T ss_pred             CCCEEEEECc-cHHHHHHHHHHHhCCCeEEEEcCCHHHHHH-HHHCCCEe-------eCCHHHHHhcCCEEEEECC
Confidence            4679999985 999999999999999999999998754221 11113322       1235567778888888764

>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*

Probab=96.85  E-value=0.001  Score=56.29  Aligned_cols=102  Identities=12%  Similarity=0.074  Sum_probs=65.1

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHC--CCeEEEEecCCCccccc---cc------CCceeEEeccCCCHhHHHHHhcCCCEE
Q 023205           57 EKLLVLGGNGFVGSHICREALDR--GLTVASLSRSGRSSLRD---SW------ANNVIWHQGNLLSSDSWKEALDGVTAV  125 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~--g~~V~~l~R~~~~~~~~---~~------~~~~~~i~~Dl~d~~~~~~~~~~~d~v  125 (286)
                      |+|.|+|+ |.+|..++..|...  +++|++++++++.....   ..      ....++...  +|   +++ ++++|+|
T Consensus         1 mkI~VIGa-G~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t--~d---~~~-l~~aDvV   73 (310)
T 1guz_A            1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGS--ND---YAD-TANSDIV   73 (310)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEE--SC---GGG-GTTCSEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEEEEC--CC---HHH-HCCCCEE
Confidence            48999998 99999999999986  68999999987542111   00      011121110  22   223 7899999


Q ss_pred             EEccccCCCc----chhhhhhhHHHHHHHHHHHHcCCC-EEEEEe
Q 023205          126 ISCVGGFGSN----SYMYKINGTANINAIRAASEKGVK-RFVYIS  165 (286)
Q Consensus       126 i~~a~~~~~~----~~~~~~~~~~~~~l~~~a~~~~v~-~~v~~S  165 (286)
                      |.+++....+    ...+..|......+++.+++...+ .++.+|
T Consensus        74 iiav~~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~viv~t  118 (310)
T 1guz_A           74 IITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIVVS  118 (310)
T ss_dssp             EECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCSSCEEEECC
T ss_pred             EEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEc
Confidence            9999754221    234456666667777777776544 344443

>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}

Probab=96.84  E-value=0.0014  Score=53.20  Aligned_cols=34  Identities=24%  Similarity=0.456  Sum_probs=28.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEE-EecCC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVAS-LSRSG   90 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~-l~R~~   90 (286)
                      |++|.|+|+ |.+|+.+++.+.+++.++.+ ++|+.
T Consensus         3 MmkI~ViGa-GrMG~~i~~~l~~~~~eLva~~d~~~   37 (243)
T 3qy9_A            3 SMKILLIGY-GAMNQRVARLAEEKGHEIVGVIENTP   37 (243)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEECSSC
T ss_pred             ceEEEEECc-CHHHHHHHHHHHhCCCEEEEEEecCc
Confidence            579999999 99999999999998777665 45544

>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6

Probab=96.83  E-value=0.00049  Score=57.80  Aligned_cols=67  Identities=15%  Similarity=0.188  Sum_probs=46.0

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccc
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVG  130 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~  130 (286)
                      |+|+|.|.| .|.+|..+++.|.+.|++|++.+|+++..... ...++..    .   .++.++++++|+||.+..
T Consensus         4 M~m~i~iiG-~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~-~~~g~~~----~---~~~~~~~~~~D~vi~~v~   70 (299)
T 1vpd_A            4 MTMKVGFIG-LGIMGKPMSKNLLKAGYSLVVSDRNPEAIADV-IAAGAET----A---STAKAIAEQCDVIITMLP   70 (299)
T ss_dssp             --CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHH-HHTTCEE----C---SSHHHHHHHCSEEEECCS
T ss_pred             ccceEEEEC-chHHHHHHHHHHHhCCCEEEEEeCCHHHHHHH-HHCCCee----c---CCHHHHHhCCCEEEEECC
Confidence            346899999 59999999999999999999999886542111 1112221    1   124455667899998875

>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A

Probab=96.80  E-value=0.0097  Score=50.21  Aligned_cols=102  Identities=18%  Similarity=0.186  Sum_probs=67.8

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCC--CeEEEEecCCCcccc------cc--cCCceeEEeccCCCHhHHHHHhcCCCEEE
Q 023205           57 EKLLVLGGNGFVGSHICREALDRG--LTVASLSRSGRSSLR------DS--WANNVIWHQGNLLSSDSWKEALDGVTAVI  126 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g--~~V~~l~R~~~~~~~------~~--~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi  126 (286)
                      +||.|+|+ |.+|..++-.|+.++  .++.+++++.++...      ..  ....+++.. +  +    .++++++|+||
T Consensus         1 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~~-~--~----~~a~~~aD~Vi   72 (310)
T 2xxj_A            1 MKVGIVGS-GMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVWA-G--S----YGDLEGARAVV   72 (310)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEEE-C--C----GGGGTTEEEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEEE-C--C----HHHhCCCCEEE
Confidence            58999998 999999999999887  589999987543211      00  012334432 2  2    34589999999


Q ss_pred             EccccCCCc----chhhhhhhHHHHHHHHHHHHcCCCEEEEEec
Q 023205          127 SCVGGFGSN----SYMYKINGTANINAIRAASEKGVKRFVYISA  166 (286)
Q Consensus       127 ~~a~~~~~~----~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss  166 (286)
                      ..++....+    ......|......+++.+++....-++.+-|
T Consensus        73 i~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t  116 (310)
T 2xxj_A           73 LAAGVAQRPGETRLQLLDRNAQVFAQVVPRVLEAAPEAVLLVAT  116 (310)
T ss_dssp             ECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             ECCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEec
Confidence            999875432    1344566677777788887776554444433

>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*

Probab=96.80  E-value=0.0079  Score=51.82  Aligned_cols=71  Identities=15%  Similarity=0.248  Sum_probs=52.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccC-CCHhHHHHHhcCCCEEEEccc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNL-LSSDSWKEALDGVTAVISCVG  130 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl-~d~~~~~~~~~~~d~vi~~a~  130 (286)
                      ||+|+|+|| |..|..++..+.+.|++|++++.+++..... ..+  +++..|. .|.+.+....+++|+|+-..+
T Consensus         1 MK~I~ilGg-g~~g~~~~~~Ak~~G~~vv~vd~~~~~~~~~-~aD--~~~~~~~~~d~~~~~~~~~~~D~v~~~~~   72 (363)
T 4ffl_A            1 MKTICLVGG-KLQGFEAAYLSKKAGMKVVLVDKNPQALIRN-YAD--EFYCFDVIKEPEKLLELSKRVDAVLPVNE   72 (363)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCTTCTTTT-TSS--EEEECCTTTCHHHHHHHHTSSSEEEECCC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCChhHh-hCC--EEEECCCCcCHHHHHHHhcCCCEEEECCC
Confidence            689999995 8999999999999999999998876542211 111  3445554 466777777789999876543

>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*

Probab=96.80  E-value=0.0013  Score=55.45  Aligned_cols=36  Identities=14%  Similarity=0.330  Sum_probs=33.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRS   92 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~   92 (286)
                      |++|.++| .|.+|..+++.|++.||+|++.+|++++
T Consensus         3 M~kIgfIG-lG~MG~~mA~~L~~~G~~v~v~dr~~~~   38 (300)
T 3obb_A            3 MKQIAFIG-LGHMGAPMATNLLKAGYLLNVFDLVQSA   38 (300)
T ss_dssp             CCEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSSHHH
T ss_pred             cCEEEEee-ehHHHHHHHHHHHhCCCeEEEEcCCHHH
Confidence            67999999 5999999999999999999999998765

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=96.78  E-value=0.0029  Score=54.94  Aligned_cols=74  Identities=15%  Similarity=0.120  Sum_probs=48.3

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHh--cCCCEEEEcccc
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEAL--DGVTAVISCVGG  131 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~--~~~d~vi~~a~~  131 (286)
                      ...+|+|+||+|.+|...++.+...|.+|++.++. ++ ......-+...+ .|..+.+..+.+.  .++|+||.++|.
T Consensus       183 ~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~~~-~~-~~~~~~lGa~~v-~~~~~~~~~~~~~~~~g~D~vid~~g~  258 (375)
T 2vn8_A          183 TGKRVLILGASGGVGTFAIQVMKAWDAHVTAVCSQ-DA-SELVRKLGADDV-IDYKSGSVEEQLKSLKPFDFILDNVGG  258 (375)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECG-GG-HHHHHHTTCSEE-EETTSSCHHHHHHTSCCBSEEEESSCT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEeCh-HH-HHHHHHcCCCEE-EECCchHHHHHHhhcCCCCEEEECCCC
Confidence            46799999999999999999999999999988843 22 111111122221 2444433233322  479999999875

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=96.76  E-value=0.0012  Score=55.21  Aligned_cols=65  Identities=17%  Similarity=0.232  Sum_probs=46.3

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccc
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVG  130 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~  130 (286)
                      |+|.|.|. |.+|..+++.|.+.|++|++.+|++++..... ..++..       ..++.++++++|+||.+..
T Consensus         2 ~~i~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~-~~g~~~-------~~~~~~~~~~aDvvi~~vp   66 (287)
T 3pef_A            2 QKFGFIGL-GIMGSAMAKNLVKAGCSVTIWNRSPEKAEELA-ALGAER-------AATPCEVVESCPVTFAMLA   66 (287)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSGGGGHHHH-HTTCEE-------CSSHHHHHHHCSEEEECCS
T ss_pred             CEEEEEee-cHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHH-HCCCee-------cCCHHHHHhcCCEEEEEcC
Confidence            58999995 99999999999999999999999876532111 112221       1234556667888887764

>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*

Probab=96.75  E-value=0.018  Score=49.65  Aligned_cols=154  Identities=12%  Similarity=0.010  Sum_probs=85.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC--e---EEEEecCCCcc----------cccccCCceeEEeccCCCHhHHHHHhc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGL--T---VASLSRSGRSS----------LRDSWANNVIWHQGNLLSSDSWKEALD  120 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~--~---V~~l~R~~~~~----------~~~~~~~~~~~i~~Dl~d~~~~~~~~~  120 (286)
                      +.||.|+||+|.||.+++-.|+..+.  +   +.+...+.+..          +.....+-..-+.  +.  ..-.+.++
T Consensus        32 ~~KV~ViGAaG~VG~~la~~l~~~~l~~e~~~l~L~d~d~~~~~~~~~G~amDL~h~~~p~~~~v~--i~--~~~y~~~~  107 (375)
T 7mdh_A           32 LVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVS--IG--IDPYEVFE  107 (375)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEE--EE--SCHHHHTT
T ss_pred             CCEEEEECCCChHHHHHHHHHHcCCcCCCCceeEEEecCccchhhhhHHHHHhHHhhhhhhcCCcE--Ee--cCCHHHhC
Confidence            56899999999999999999998763  2   55544433221          0011111111111  11  12356889


Q ss_pred             CCCEEEEccccCCCc----chhhhhhhHHHHHHHHHHHHc-CCC-EEEEEecCC----------cCCCCcc-c-cchHHH
Q 023205          121 GVTAVISCVGGFGSN----SYMYKINGTANINAIRAASEK-GVK-RFVYISAAD----------FGVANYL-L-QGYYEG  182 (286)
Q Consensus       121 ~~d~vi~~a~~~~~~----~~~~~~~~~~~~~l~~~a~~~-~v~-~~v~~Ss~~----------~~~~~~~-~-~~y~~s  182 (286)
                      ++|+||.+||....+    .+.++.|......+.+...+. +.. .++.+|-.+          .+..... . .+-...
T Consensus       108 daDvVVitag~prkpG~tR~DLl~~N~~I~k~i~~~i~~~a~p~~ivlVvsNPvD~~t~ia~k~sg~~~~rvig~gT~LD  187 (375)
T 7mdh_A          108 DVDWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAVASKNVKVLVVGNPCNTNALICLKNAPDIPAKNFHALTRLD  187 (375)
T ss_dssp             TCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHHHHTCTTSCGGGEEECCHHH
T ss_pred             CCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCchhHHHHHHHHHcCCCCccEEEeeehHH
Confidence            999999999865322    356678888888888888774 444 344444320          1111110 0 010111


Q ss_pred             HHHHHHHHHHhCCCcEEEEeeCeeecCCCCC
Q 023205          183 KRAAETELLTRYPYGGVILRPGFIYGTRTVG  213 (286)
Q Consensus       183 K~~~E~~~~~~~g~~~~ilRp~~v~g~~~~~  213 (286)
                      -.....++.+..|++..-++--+++|.....
T Consensus       188 saR~r~~lA~~lgv~~~~V~~v~V~GeHgdt  218 (375)
T 7mdh_A          188 ENRAKCQLALKAGVFYDKVSNVTIWGNHSTT  218 (375)
T ss_dssp             HHHHHHHHHHHTTSCGGGEECCEEEBCSSTT
T ss_pred             HHHHHHHHHHHhCcChhhcccceEEecCCCc
Confidence            1222334555677766666644778876543

>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}

Probab=96.75  E-value=0.0031  Score=50.00  Aligned_cols=48  Identities=21%  Similarity=0.197  Sum_probs=40.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVG  130 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~  130 (286)
                      +++|.|.| .|.+|..++..|.+.|++|++.+|+++                          .++++|+||.+..
T Consensus        19 ~~~I~iiG-~G~mG~~la~~l~~~g~~V~~~~~~~~--------------------------~~~~aD~vi~av~   66 (209)
T 2raf_A           19 GMEITIFG-KGNMGQAIGHNFEIAGHEVTYYGSKDQ--------------------------ATTLGEIVIMAVP   66 (209)
T ss_dssp             -CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECTTCC--------------------------CSSCCSEEEECSC
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEcCCHH--------------------------HhccCCEEEEcCC
Confidence            57899999 699999999999999999999988743                          4567898888864

>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6

Probab=96.74  E-value=0.0013  Score=56.69  Aligned_cols=75  Identities=15%  Similarity=0.052  Sum_probs=48.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEec------cCC-CHhHHHHHhcCCCEEEEc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQG------NLL-SSDSWKEALDGVTAVISC  128 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~------Dl~-d~~~~~~~~~~~d~vi~~  128 (286)
                      +|+|.|.|+ |.+|..++..|.+.|++|++++|+++.........++.+...      .+. ..+++.++++++|+||.+
T Consensus         4 ~mki~iiG~-G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~   82 (359)
T 1bg6_A            4 SKTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILIV   82 (359)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEEEC
T ss_pred             cCeEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHhcCCeEEeccccccccccceecCCHHHHHhcCCEEEEe
Confidence            368999996 999999999999999999999997643211000001211110      110 122355667889999999


Q ss_pred             ccc
Q 023205          129 VGG  131 (286)
Q Consensus       129 a~~  131 (286)
                      ...
T Consensus        83 v~~   85 (359)
T 1bg6_A           83 VPA   85 (359)
T ss_dssp             SCG
T ss_pred             CCc
Confidence            764

>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*

Probab=96.74  E-value=0.0014  Score=49.53  Aligned_cols=66  Identities=9%  Similarity=0.128  Sum_probs=47.8

Q ss_pred             ChhHHHHHHHHHHCCCeEEEEecCCCcccc--------cccCCceeEEeccCCCH--hHHHHHhc------CCCEEEEcc
Q 023205           66 GFVGSHICREALDRGLTVASLSRSGRSSLR--------DSWANNVIWHQGNLLSS--DSWKEALD------GVTAVISCV  129 (286)
Q Consensus        66 G~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~--------~~~~~~~~~i~~Dl~d~--~~~~~~~~------~~d~vi~~a  129 (286)
                      |.++...++.|.+.|++|++..|+......        .........+.+|++++  ++++++++      +-|++|||+
T Consensus        26 ~~p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~~G~~~~~i~~Dv~~~~~~~v~~~~~~i~~~~G~dVLVnnA  105 (157)
T 3gxh_A           26 GLPNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQAGMDYVYIPVDWQNPKVEDVEAFFAAMDQHKGKDVLVHCL  105 (157)
T ss_dssp             BCCCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHHTTCEEEECCCCTTSCCHHHHHHHHHHHHHTTTSCEEEECS
T ss_pred             CCCCHHHHHHHHHcCCCEEEECCCcccccccccHHHHHHHcCCeEEEecCCCCCCCHHHHHHHHHHHHhcCCCCEEEECC
Confidence            578899999999999999988886543211        11123466678899998  87776653      239999999


Q ss_pred             cc
Q 023205          130 GG  131 (286)
Q Consensus       130 ~~  131 (286)
                      |.
T Consensus       106 gg  107 (157)
T 3gxh_A          106 AN  107 (157)
T ss_dssp             BS
T ss_pred             CC
Confidence            86

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=96.72  E-value=0.0023  Score=53.87  Aligned_cols=71  Identities=23%  Similarity=0.216  Sum_probs=52.6

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEcccc
Q 023205           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG  131 (286)
Q Consensus        54 ~~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~  131 (286)
                      ...++|+|.|+ |.+|+.+++.|...|.+|++.+|+.++.... ...+++.+     +.++++++++++|+|+.+.+.
T Consensus       155 l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~-~~~g~~~~-----~~~~l~~~l~~aDvVi~~~p~  225 (300)
T 2rir_A          155 IHGSQVAVLGL-GRTGMTIARTFAALGANVKVGARSSAHLARI-TEMGLVPF-----HTDELKEHVKDIDICINTIPS  225 (300)
T ss_dssp             STTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHTTCEEE-----EGGGHHHHSTTCSEEEECCSS
T ss_pred             CCCCEEEEEcc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHH-HHCCCeEE-----chhhHHHHhhCCCEEEECCCh
Confidence            34679999996 9999999999999999999999986442110 01133332     234577888999999999875

>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}

Probab=96.71  E-value=0.00073  Score=54.18  Aligned_cols=67  Identities=15%  Similarity=0.065  Sum_probs=45.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEE-EecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVAS-LSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVG  130 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~-l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~  130 (286)
                      +|+|.|.| +|.+|..+++.|.+.|++|++ .+|++++.......-++....   .+.    +.++++|+||.+..
T Consensus        23 mmkI~IIG-~G~mG~~la~~l~~~g~~V~~v~~r~~~~~~~l~~~~g~~~~~---~~~----~~~~~aDvVilavp   90 (220)
T 4huj_A           23 MTTYAIIG-AGAIGSALAERFTAAQIPAIIANSRGPASLSSVTDRFGASVKA---VEL----KDALQADVVILAVP   90 (220)
T ss_dssp             SCCEEEEE-CHHHHHHHHHHHHHTTCCEEEECTTCGGGGHHHHHHHTTTEEE---CCH----HHHTTSSEEEEESC
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEECCCHHHHHHHHHHhCCCccc---ChH----HHHhcCCEEEEeCC
Confidence            57899999 699999999999999999998 788765432111000122211   122    33678999998864

>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}

Probab=96.71  E-value=0.0024  Score=56.49  Aligned_cols=75  Identities=24%  Similarity=0.152  Sum_probs=48.9

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEecc-------------CCCHhHHHHHhcC
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGN-------------LLSSDSWKEALDG  121 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~D-------------l~d~~~~~~~~~~  121 (286)
                      .|.+|.|.| .||+|..++..|.+.|++|++++.++++-.. .......+.+-+             +.=..+..+++.+
T Consensus        20 ~m~~IaViG-lGYVGLp~A~~~A~~G~~V~g~Did~~kV~~-ln~G~~pi~Epgl~ell~~~~~~g~l~~tt~~~~ai~~   97 (444)
T 3vtf_A           20 HMASLSVLG-LGYVGVVHAVGFALLGHRVVGYDVNPSIVER-LRAGRPHIYEPGLEEALGRALSSGRLSFAESAEEAVAA   97 (444)
T ss_dssp             CCCEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSCHHHHHH-HHTTCCSSCCTTHHHHHHHHHHTTCEEECSSHHHHHHT
T ss_pred             CCCEEEEEc-cCHHHHHHHHHHHhCCCcEEEEECCHHHHHH-HHCCCCCCCCCCHHHHHHHHHHcCCeeEEcCHHHHHhc
Confidence            367999998 5999999999999999999999988654211 000011111111             1101234466778


Q ss_pred             CCEEEEcccc
Q 023205          122 VTAVISCVGG  131 (286)
Q Consensus       122 ~d~vi~~a~~  131 (286)
                      +|++|-|.+.
T Consensus        98 ad~~~I~VpT  107 (444)
T 3vtf_A           98 TDATFIAVGT  107 (444)
T ss_dssp             SSEEEECCCC
T ss_pred             CCceEEEecC
Confidence            9999998764

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=96.71  E-value=0.00037  Score=58.37  Aligned_cols=74  Identities=14%  Similarity=0.133  Sum_probs=48.7

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc--cccCCc---eeEEeccCCCHhHHHHHhcCCCEEEEcc
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSWANN---VIWHQGNLLSSDSWKEALDGVTAVISCV  129 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~--~~~~~~---~~~i~~Dl~d~~~~~~~~~~~d~vi~~a  129 (286)
                      ..++++|+|+ |.+|+.++..|++.| +|++.+|+.++...  +.....   ...+.+|+.+   +.+.+.++|+||+++
T Consensus       127 ~~k~vlV~Ga-GgiG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~~~~~~~~d~~~---~~~~~~~~DilVn~a  201 (287)
T 1nvt_A          127 KDKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSG---LDVDLDGVDIIINAT  201 (287)
T ss_dssp             CSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEEC---TTCCCTTCCEEEECS
T ss_pred             CCCEEEEECc-hHHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhcccccceeEEEee---HHHhhCCCCEEEECC
Confidence            3578999998 599999999999999 99999998653211  000000   0001223333   134567899999999


Q ss_pred             ccCC
Q 023205          130 GGFG  133 (286)
Q Consensus       130 ~~~~  133 (286)
                      +...
T Consensus       202 g~~~  205 (287)
T 1nvt_A          202 PIGM  205 (287)
T ss_dssp             CTTC
T ss_pred             CCCC
Confidence            8643

>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A

Probab=96.71  E-value=0.0075  Score=51.00  Aligned_cols=68  Identities=16%  Similarity=0.224  Sum_probs=52.8

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccccC
Q 023205           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGF  132 (286)
Q Consensus        54 ~~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~~  132 (286)
                      ...++|.|.|. |.||+.+++.|...|++|++.+|++...      +.+....    ..++++++++++|+|+.+....
T Consensus       137 l~g~tvGIiG~-G~IG~~vA~~l~~~G~~V~~~dr~~~~~------~~~~~~~----~~~~l~ell~~aDiV~l~~Plt  204 (315)
T 3pp8_A          137 REEFSVGIMGA-GVLGAKVAESLQAWGFPLRCWSRSRKSW------PGVESYV----GREELRAFLNQTRVLINLLPNT  204 (315)
T ss_dssp             STTCCEEEECC-SHHHHHHHHHHHTTTCCEEEEESSCCCC------TTCEEEE----SHHHHHHHHHTCSEEEECCCCC
T ss_pred             cCCCEEEEEee-CHHHHHHHHHHHHCCCEEEEEcCCchhh------hhhhhhc----ccCCHHHHHhhCCEEEEecCCc
Confidence            34679999995 9999999999999999999999986542      2222221    2367889999999999887654

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=96.69  E-value=0.00051  Score=57.01  Aligned_cols=70  Identities=17%  Similarity=0.207  Sum_probs=47.1

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc--cccC--CceeEEeccCCCHhHHHHHhcCCCEEEEccc
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSWA--NNVIWHQGNLLSSDSWKEALDGVTAVISCVG  130 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~--~~~~--~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~  130 (286)
                      ..++|+|+|+ |.+|+.++..|++.|.+|++.+|+.++...  +...  ..+..  .|+   +++.+  .++|+||++++
T Consensus       118 ~~~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~~~~~~--~~~---~~~~~--~~~DivIn~t~  189 (272)
T 1p77_A          118 PNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQA--VSM---DSIPL--QTYDLVINATS  189 (272)
T ss_dssp             TTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEE--EEG---GGCCC--SCCSEEEECCC
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHccccCCeEE--eeH---HHhcc--CCCCEEEECCC
Confidence            4579999998 889999999999999999999998654211  1100  02222  232   11110  37999999987


Q ss_pred             cC
Q 023205          131 GF  132 (286)
Q Consensus       131 ~~  132 (286)
                      ..
T Consensus       190 ~~  191 (272)
T 1p77_A          190 AG  191 (272)
T ss_dssp             C-
T ss_pred             CC
Confidence            64

>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}

Probab=96.69  E-value=0.00075  Score=57.31  Aligned_cols=67  Identities=15%  Similarity=0.044  Sum_probs=47.7

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCC-CeEEEEecCCCc------ccccccCCceeEEeccCCCHh-HHHHHhcCCCEEE
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRG-LTVASLSRSGRS------SLRDSWANNVIWHQGNLLSSD-SWKEALDGVTAVI  126 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g-~~V~~l~R~~~~------~~~~~~~~~~~~i~~Dl~d~~-~~~~~~~~~d~vi  126 (286)
                      |+++|.|.| .|.+|..+++.|++.| ++|++.+|+++.      ........++         .. +..++++++|+||
T Consensus        23 M~m~IgvIG-~G~mG~~lA~~L~~~G~~~V~~~dr~~~~~~~~~~~~~~~~~~g~---------~~~s~~e~~~~aDvVi   92 (317)
T 4ezb_A           23 MMTTIAFIG-FGEAAQSIAGGLGGRNAARLAAYDLRFNDPAASGALRARAAELGV---------EPLDDVAGIACADVVL   92 (317)
T ss_dssp             SCCEEEEEC-CSHHHHHHHHHHHTTTCSEEEEECGGGGCTTTHHHHHHHHHHTTC---------EEESSGGGGGGCSEEE
T ss_pred             cCCeEEEEC-ccHHHHHHHHHHHHcCCCeEEEEeCCCccccchHHHHHHHHHCCC---------CCCCHHHHHhcCCEEE
Confidence            467999999 5999999999999999 999999998631      0111111122         12 2345677899999


Q ss_pred             Ecccc
Q 023205          127 SCVGG  131 (286)
Q Consensus       127 ~~a~~  131 (286)
                      .+..+
T Consensus        93 ~avp~   97 (317)
T 4ezb_A           93 SLVVG   97 (317)
T ss_dssp             ECCCG
T ss_pred             EecCC
Confidence            98754

>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1

Probab=96.69  E-value=0.0072  Score=50.45  Aligned_cols=88  Identities=25%  Similarity=0.287  Sum_probs=57.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEE-EecCCCcccccccCCceeEEeccCCCHhHHHHHhc--CCCEEEEccccC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVAS-LSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD--GVTAVISCVGGF  132 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~-l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~--~~d~vi~~a~~~  132 (286)
                      .++|+|.|++|..|+.+++.+.+.|++++. ++......  +  ..++.++       .++.++.+  ++|+++.+..+ 
T Consensus         7 ~~~VaVvGasG~~G~~~~~~l~~~g~~~v~~VnP~~~g~--~--i~G~~vy-------~sl~el~~~~~~Dv~Ii~vp~-   74 (288)
T 1oi7_A            7 ETRVLVQGITGREGQFHTKQMLTYGTKIVAGVTPGKGGM--E--VLGVPVY-------DTVKEAVAHHEVDASIIFVPA-   74 (288)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTC--E--ETTEEEE-------SSHHHHHHHSCCSEEEECCCH-
T ss_pred             CCEEEEECCCCCHHHHHHHHHHHcCCeEEEEECCCCCCc--e--ECCEEee-------CCHHHHhhcCCCCEEEEecCH-
Confidence            468999999999999999999998998553 33322110  0  0122222       22444555  79999988544 


Q ss_pred             CCcchhhhhhhHHHHHHHHHHHHcCCCEEEEEec
Q 023205          133 GSNSYMYKINGTANINAIRAASEKGVKRFVYISA  166 (286)
Q Consensus       133 ~~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss  166 (286)
                                 .....+++.|.+.|++.+|.+++
T Consensus        75 -----------~~~~~~~~ea~~~Gi~~vVi~t~   97 (288)
T 1oi7_A           75 -----------PAAADAALEAAHAGIPLIVLITE   97 (288)
T ss_dssp             -----------HHHHHHHHHHHHTTCSEEEECCS
T ss_pred             -----------HHHHHHHHHHHHCCCCEEEEECC
Confidence                       23446677888888876776665

>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}

Probab=96.68  E-value=0.0017  Score=52.93  Aligned_cols=71  Identities=20%  Similarity=0.266  Sum_probs=48.3

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCc--cc-----------ccccCCceeEEeccCCCHhHHHHHhc
Q 023205           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRS--SL-----------RDSWANNVIWHQGNLLSSDSWKEALD  120 (286)
Q Consensus        54 ~~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~--~~-----------~~~~~~~~~~i~~Dl~d~~~~~~~~~  120 (286)
                      ...++|.|.| +|.+|..+++.|++.|++|++.+|++++  ..           ..... ..    + .....+..++++
T Consensus        17 ~~~~kIgiIG-~G~mG~alA~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-~~----~-~~~~~~~~e~~~   89 (245)
T 3dtt_A           17 FQGMKIAVLG-TGTVGRTMAGALADLGHEVTIGTRDPKATLARAEPDAMGAPPFSQWLP-EH----P-HVHLAAFADVAA   89 (245)
T ss_dssp             --CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHTCC-------CCHHHHGG-GS----T-TCEEEEHHHHHH
T ss_pred             cCCCeEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCChhhhhhhhhhhhhcchhhhHHHh-hc----C-ceeccCHHHHHh
Confidence            3467999998 6999999999999999999999998654  00           00000 00    0 011234556778


Q ss_pred             CCCEEEEcccc
Q 023205          121 GVTAVISCVGG  131 (286)
Q Consensus       121 ~~d~vi~~a~~  131 (286)
                      ++|+||.+..+
T Consensus        90 ~aDvVilavp~  100 (245)
T 3dtt_A           90 GAELVVNATEG  100 (245)
T ss_dssp             HCSEEEECSCG
T ss_pred             cCCEEEEccCc
Confidence            89999999754

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=96.66  E-value=0.0071  Score=49.98  Aligned_cols=56  Identities=16%  Similarity=0.230  Sum_probs=47.3

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEcccc
Q 023205           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG  131 (286)
Q Consensus        54 ~~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~  131 (286)
                      ...++++|.|+++.+|+.++..|+..|..|+++.|..                      .++.+.++.+|+||...|.
T Consensus       158 l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t----------------------~~L~~~~~~ADIVI~Avg~  213 (285)
T 3p2o_A          158 LEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKT----------------------KDLSLYTRQADLIIVAAGC  213 (285)
T ss_dssp             CTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC----------------------SCHHHHHTTCSEEEECSSC
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCc----------------------hhHHHHhhcCCEEEECCCC
Confidence            3578999999999999999999999999999887652                      1356778899999998875

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=96.65  E-value=0.003  Score=54.21  Aligned_cols=94  Identities=13%  Similarity=0.121  Sum_probs=59.8

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCce-eEEeccCCCHh---HHHHHh--cCCCEEEEccc
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNV-IWHQGNLLSSD---SWKEAL--DGVTAVISCVG  130 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~-~~i~~Dl~d~~---~~~~~~--~~~d~vi~~a~  130 (286)
                      ++|+|+||+|.+|...++.+...|.+|+++++++++..... .-+. .++  |..+.+   .+.+..  +++|+||.++|
T Consensus       166 ~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~~Ga~~~~--~~~~~~~~~~v~~~~~~~g~D~vid~~g  242 (349)
T 3pi7_A          166 KAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLK-DIGAAHVL--NEKAPDFEATLREVMKAEQPRIFLDAVT  242 (349)
T ss_dssp             SEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHH-HHTCSEEE--ETTSTTHHHHHHHHHHHHCCCEEEESSC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCCEEE--ECCcHHHHHHHHHHhcCCCCcEEEECCC
Confidence            68999999999999999999999999999998765521111 0112 222  333322   233333  37999999987


Q ss_pred             cCCCcchhhhhhhHHHHHHHHHHHHcCCCEEEEEecC
Q 023205          131 GFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAA  167 (286)
Q Consensus       131 ~~~~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~  167 (286)
                      ..            .....++.++..  .+++.+++.
T Consensus       243 ~~------------~~~~~~~~l~~~--G~iv~~G~~  265 (349)
T 3pi7_A          243 GP------------LASAIFNAMPKR--ARWIIYGRL  265 (349)
T ss_dssp             HH------------HHHHHHHHSCTT--CEEEECCCS
T ss_pred             Ch------------hHHHHHhhhcCC--CEEEEEecc
Confidence            51            112334444433  378888763

>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}

Probab=96.65  E-value=0.0036  Score=55.99  Aligned_cols=35  Identities=29%  Similarity=0.377  Sum_probs=32.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHC-CC-eEEEEecCCC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDR-GL-TVASLSRSGR   91 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~-g~-~V~~l~R~~~   91 (286)
                      +|+|.|.|+ |++|..++..|++. |+ +|++.+|+++
T Consensus        18 ~mkIaVIGl-G~mG~~lA~~la~~~G~~~V~~~D~~~~   54 (478)
T 3g79_A           18 IKKIGVLGM-GYVGIPAAVLFADAPCFEKVLGFQRNSK   54 (478)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred             CCEEEEECc-CHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence            578999995 99999999999999 99 9999999987

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=96.65  E-value=0.0018  Score=56.00  Aligned_cols=74  Identities=16%  Similarity=0.180  Sum_probs=53.5

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccC------------------CCHhHHH
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNL------------------LSSDSWK  116 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl------------------~d~~~~~  116 (286)
                      ...+|+|+|+ |-+|...++.+...|.+|++++|++.+.... ..-+.+++..|+                  .+.+.+.
T Consensus       183 ~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~-~~lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l~  260 (381)
T 3p2y_A          183 KPASALVLGV-GVAGLQALATAKRLGAKTTGYDVRPEVAEQV-RSVGAQWLDLGIDAAGEGGYARELSEAERAQQQQALE  260 (381)
T ss_dssp             CCCEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGGGHHHH-HHTTCEECCCC-------------CHHHHHHHHHHHH
T ss_pred             CCCEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHcCCeEEeccccccccccchhhhhHHHHhhhHHHHH
Confidence            3579999997 9999999999999999999999997652211 112344443221                  1235677


Q ss_pred             HHhcCCCEEEEccc
Q 023205          117 EALDGVTAVISCVG  130 (286)
Q Consensus       117 ~~~~~~d~vi~~a~  130 (286)
                      +.++++|+||.++.
T Consensus       261 e~l~~aDIVI~tv~  274 (381)
T 3p2y_A          261 DAITKFDIVITTAL  274 (381)
T ss_dssp             HHHTTCSEEEECCC
T ss_pred             HHHhcCCEEEECCC
Confidence            88899999998863

>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}

Probab=96.64  E-value=0.00077  Score=56.32  Aligned_cols=66  Identities=17%  Similarity=0.152  Sum_probs=45.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVG  130 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~  130 (286)
                      |++|.|.| .|.+|..+++.|++.|++|++.+|++++..... ..++.+       ..+..++++++|+||.+..
T Consensus         1 M~~I~iiG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~-~~g~~~-------~~~~~~~~~~advvi~~v~   66 (287)
T 3pdu_A            1 MTTYGFLG-LGIMGGPMAANLVRAGFDVTVWNRNPAKCAPLV-ALGARQ-------ASSPAEVCAACDITIAMLA   66 (287)
T ss_dssp             CCCEEEEC-CSTTHHHHHHHHHHHTCCEEEECSSGGGGHHHH-HHTCEE-------CSCHHHHHHHCSEEEECCS
T ss_pred             CCeEEEEc-cCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHH-HCCCee-------cCCHHHHHHcCCEEEEEcC
Confidence            46899998 599999999999999999999999876532111 112211       1234455667788877764

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=96.64  E-value=0.0014  Score=55.63  Aligned_cols=74  Identities=24%  Similarity=0.233  Sum_probs=51.8

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEcccc
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG  131 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~  131 (286)
                      ...+|+|+||+|.+|...++.+...|.+|++..+..+....+..  +... ..|..+.+.+.+.++++|+||.+.|.
T Consensus       152 ~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~~~~~~~~~l--Ga~~-~i~~~~~~~~~~~~~g~D~v~d~~g~  225 (321)
T 3tqh_A          152 QGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASKRNHAFLKAL--GAEQ-CINYHEEDFLLAISTPVDAVIDLVGG  225 (321)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECHHHHHHHHHH--TCSE-EEETTTSCHHHHCCSCEEEEEESSCH
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeccchHHHHHHc--CCCE-EEeCCCcchhhhhccCCCEEEECCCc
Confidence            45789999999999999999999999999998854321111111  2221 12444444366677899999999874

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=96.64  E-value=0.0045  Score=53.94  Aligned_cols=73  Identities=15%  Similarity=0.135  Sum_probs=50.6

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCC----------------------CH
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLL----------------------SS  112 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~----------------------d~  112 (286)
                      ..++|+|+|+ |.+|..+++.+...|.+|++.+|++.+..... .-+.+++..|..                      ..
T Consensus       171 ~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~-~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~~  248 (384)
T 1l7d_A          171 PPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVE-SLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQA  248 (384)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHH-HTTCEECCC-----------------------CCHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCeEEeecccccccccccccchhhcCHHHHhhhH
Confidence            3679999996 99999999999999999999999876521111 112233211211                      12


Q ss_pred             hHHHHHhcCCCEEEEcc
Q 023205          113 DSWKEALDGVTAVISCV  129 (286)
Q Consensus       113 ~~~~~~~~~~d~vi~~a  129 (286)
                      +.+.+.++++|+||+++
T Consensus       249 ~~l~~~~~~aDvVi~~~  265 (384)
T 1l7d_A          249 EAVLKELVKTDIAITTA  265 (384)
T ss_dssp             HHHHHHHTTCSEEEECC
T ss_pred             HHHHHHhCCCCEEEECC
Confidence            33777888999999987

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=96.63  E-value=0.0028  Score=54.67  Aligned_cols=75  Identities=21%  Similarity=0.033  Sum_probs=52.7

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEcccc
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG  131 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~  131 (286)
                      ...+|||+|+ |.+|...++.+...|.+|+++++++++.......-+...+ .|..+.+.+.++..++|+||.++|.
T Consensus       180 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~lGa~~v-i~~~~~~~~~~~~~g~D~vid~~g~  254 (357)
T 2cf5_A          180 PGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADDY-VIGSDQAKMSELADSLDYVIDTVPV  254 (357)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTSCCSCE-EETTCHHHHHHSTTTEEEEEECCCS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHcCCcee-eccccHHHHHHhcCCCCEEEECCCC
Confidence            4578999995 9999999998888899999999987653211101122111 2445566666666789999999875

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=96.62  E-value=0.027  Score=45.94  Aligned_cols=97  Identities=15%  Similarity=0.197  Sum_probs=62.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCCCccc---------------c---------cccCCc--eeEEecc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSL---------------R---------DSWANN--VIWHQGN  108 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~---------------~---------~~~~~~--~~~i~~D  108 (286)
                      ..+|+|.|+ |.+|+++++.|...|. ++++++++.-...               .         ....+.  ++.+..+
T Consensus        28 ~~~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~~  106 (251)
T 1zud_1           28 DSQVLIIGL-GGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTALQQR  106 (251)
T ss_dssp             TCEEEEECC-STTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSC
T ss_pred             cCcEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEEEecc
Confidence            468999997 7799999999999995 7888776531100               0         001123  4444444


Q ss_pred             CCCHhHHHHHhcCCCEEEEccccCCCcchhhhhhhHHHHHHHHHHHHcCCCEEEEEec
Q 023205          109 LLSSDSWKEALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISA  166 (286)
Q Consensus       109 l~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss  166 (286)
                      + +.+.+.+.++++|+||.+...   .        ..-..+-++|.+.+++ +|..+.
T Consensus       107 ~-~~~~~~~~~~~~DvVi~~~d~---~--------~~r~~l~~~~~~~~~p-~i~~~~  151 (251)
T 1zud_1          107 L-TGEALKDAVARADVVLDCTDN---M--------ATRQEINAACVALNTP-LITASA  151 (251)
T ss_dssp             C-CHHHHHHHHHHCSEEEECCSS---H--------HHHHHHHHHHHHTTCC-EEEEEE
T ss_pred             C-CHHHHHHHHhcCCEEEECCCC---H--------HHHHHHHHHHHHhCCC-EEEEec
Confidence            4 446677888899999988532   1        1122456677777764 666654

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=96.62  E-value=0.0034  Score=51.74  Aligned_cols=66  Identities=20%  Similarity=0.145  Sum_probs=47.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccccC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGF  132 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~~  132 (286)
                      .++++|+|+ |..|+.++..|.+.|.+|++.+|+.++..... .-+++..  ++.+       +.++|+||++.+..
T Consensus       118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka~~la-~~~~~~~--~~~~-------l~~~DiVInaTp~G  183 (269)
T 3phh_A          118 YQNALILGA-GGSAKALACELKKQGLQVSVLNRSSRGLDFFQ-RLGCDCF--MEPP-------KSAFDLIINATSAS  183 (269)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTHHHHH-HHTCEEE--SSCC-------SSCCSEEEECCTTC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HCCCeEe--cHHH-------hccCCEEEEcccCC
Confidence            679999996 99999999999999999999999987632211 1122332  2222       12799999987543

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=96.61  E-value=0.0024  Score=52.32  Aligned_cols=66  Identities=15%  Similarity=0.174  Sum_probs=48.8

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEcccc
Q 023205           58 KLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG  131 (286)
Q Consensus        58 ~VlVtGatG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~  131 (286)
                      +|+|.|+ |..|+.++..|++.|. +|++.+|+.++...  ....+...     ..+++.+.++++|+||++.+.
T Consensus       110 ~vliiGa-Gg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~--la~~~~~~-----~~~~~~~~~~~aDiVInatp~  176 (253)
T 3u62_A          110 PVVVVGA-GGAARAVIYALLQMGVKDIWVVNRTIERAKA--LDFPVKIF-----SLDQLDEVVKKAKSLFNTTSV  176 (253)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTCCCEEEEESCHHHHHT--CCSSCEEE-----EGGGHHHHHHTCSEEEECSST
T ss_pred             eEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHH--HHHHcccC-----CHHHHHhhhcCCCEEEECCCC
Confidence            8999997 9999999999999997 99999998655221  11122221     234566778899999998754

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=96.61  E-value=0.0012  Score=57.96  Aligned_cols=70  Identities=21%  Similarity=0.291  Sum_probs=51.3

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCCCcc--cccccCCceeEEeccCCCHhHHHHHhcCCCEEEEcccc
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSS--LRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG  131 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~--~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~  131 (286)
                      ..++|+|.|+ |.+|..+++.|...|. +|++.+|+.++.  .....  +...+     +.+++.+.+.++|+||.+.+.
T Consensus       166 ~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~--g~~~~-----~~~~l~~~l~~aDvVi~at~~  237 (404)
T 1gpj_A          166 HDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDL--GGEAV-----RFDELVDHLARSDVVVSATAA  237 (404)
T ss_dssp             TTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHH--TCEEC-----CGGGHHHHHHTCSEEEECCSS
T ss_pred             cCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc--CCcee-----cHHhHHHHhcCCCEEEEccCC
Confidence            4679999997 9999999999999998 999999986542  11111  22221     234567777899999999764


Q ss_pred             C
Q 023205          132 F  132 (286)
Q Consensus       132 ~  132 (286)
                      .
T Consensus       238 ~  238 (404)
T 1gpj_A          238 P  238 (404)
T ss_dssp             S
T ss_pred             C
Confidence            3

>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*

Probab=96.61  E-value=0.0026  Score=53.90  Aligned_cols=69  Identities=12%  Similarity=0.108  Sum_probs=48.1

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCC--eEEEEecCCCcccccccCCce-eEEeccCCCHhHHHH-HhcCCCEEEEccc
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGL--TVASLSRSGRSSLRDSWANNV-IWHQGNLLSSDSWKE-ALDGVTAVISCVG  130 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~--~V~~l~R~~~~~~~~~~~~~~-~~i~~Dl~d~~~~~~-~~~~~d~vi~~a~  130 (286)
                      +.++|.|.| .|.+|..+++.|.+.|+  +|++.+|+++...... ..++ .....|      +.+ +++++|+||.+..
T Consensus        32 ~~~kI~IIG-~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~-~~G~~~~~~~~------~~~~~~~~aDvVilavp  103 (314)
T 3ggo_A           32 SMQNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAV-DLGIIDEGTTS------IAKVEDFSPDFVMLSSP  103 (314)
T ss_dssp             SCSEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHH-HTTSCSEEESC------TTGGGGGCCSEEEECSC
T ss_pred             CCCEEEEEe-eCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-HCCCcchhcCC------HHHHhhccCCEEEEeCC
Confidence            457999999 69999999999999999  9999999865421111 1111 011112      334 6788999999875


Q ss_pred             c
Q 023205          131 G  131 (286)
Q Consensus       131 ~  131 (286)
                      +
T Consensus       104 ~  104 (314)
T 3ggo_A          104 V  104 (314)
T ss_dssp             G
T ss_pred             H
Confidence            4

>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}

Probab=96.61  E-value=0.0017  Score=54.59  Aligned_cols=65  Identities=14%  Similarity=0.031  Sum_probs=46.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVG  130 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~  130 (286)
                      +++|.|.| .|.+|..+++.|.+.|++|++.+|++++..... ..++++       ..++.++++ +|+||.+..
T Consensus        15 ~~~I~vIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~-~~g~~~-------~~~~~~~~~-aDvvi~~vp   79 (296)
T 3qha_A           15 QLKLGYIG-LGNMGAPMATRMTEWPGGVTVYDIRIEAMTPLA-EAGATL-------ADSVADVAA-ADLIHITVL   79 (296)
T ss_dssp             CCCEEEEC-CSTTHHHHHHHHTTSTTCEEEECSSTTTSHHHH-HTTCEE-------CSSHHHHTT-SSEEEECCS
T ss_pred             CCeEEEEC-cCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH-HCCCEE-------cCCHHHHHh-CCEEEEECC
Confidence            46899999 599999999999999999999999987632211 112221       123556667 888888764

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=96.60  E-value=0.0029  Score=52.98  Aligned_cols=70  Identities=20%  Similarity=0.139  Sum_probs=51.7

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEcccc
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG  131 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~  131 (286)
                      ..++|+|.|+ |.+|+.+++.|...|.+|++.+|+.++.... ...+++.+     +.+++.++++++|+|+.+.+.
T Consensus       154 ~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~-~~~g~~~~-----~~~~l~~~l~~aDvVi~~~p~  223 (293)
T 3d4o_A          154 HGANVAVLGL-GRVGMSVARKFAALGAKVKVGARESDLLARI-AEMGMEPF-----HISKAAQELRDVDVCINTIPA  223 (293)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHTTSEEE-----EGGGHHHHTTTCSEEEECCSS
T ss_pred             CCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHH-HHCCCeec-----ChhhHHHHhcCCCEEEECCCh
Confidence            4679999995 9999999999999999999999986542111 11133332     234577888999999999753

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=96.60  E-value=0.00095  Score=57.81  Aligned_cols=71  Identities=23%  Similarity=0.237  Sum_probs=49.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCC---CcccccccCCceeEEeccCCC--HhHHHHHhcCCCEEEEccc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSG---RSSLRDSWANNVIWHQGNLLS--SDSWKEALDGVTAVISCVG  130 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~---~~~~~~~~~~~~~~i~~Dl~d--~~~~~~~~~~~d~vi~~a~  130 (286)
                      .++|+|+|+ |.+|..+++.+...|.+|++++|+.   ++. .....-+...+  | .+  .+.+.+.-.++|+||+++|
T Consensus       181 g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~-~~~~~~ga~~v--~-~~~~~~~~~~~~~~~d~vid~~g  255 (366)
T 2cdc_A          181 CRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQ-TVIEETKTNYY--N-SSNGYDKLKDSVGKFDVIIDATG  255 (366)
T ss_dssp             TCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHH-HHHHHHTCEEE--E-CTTCSHHHHHHHCCEEEEEECCC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHH-HHHHHhCCcee--c-hHHHHHHHHHhCCCCCEEEECCC
Confidence            679999999 9999999999998999999999987   432 11111133444  4 33  1223322257999999987


Q ss_pred             c
Q 023205          131 G  131 (286)
Q Consensus       131 ~  131 (286)
                      .
T Consensus       256 ~  256 (366)
T 2cdc_A          256 A  256 (366)
T ss_dssp             C
T ss_pred             C
Confidence            5

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=96.60  E-value=0.0022  Score=55.06  Aligned_cols=74  Identities=22%  Similarity=0.190  Sum_probs=48.9

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCce-eEEeccCCC--HhHHHHHh-cCCCEEEEccc
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNV-IWHQGNLLS--SDSWKEAL-DGVTAVISCVG  130 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~-~~i~~Dl~d--~~~~~~~~-~~~d~vi~~a~  130 (286)
                      ...+|||+||+|.+|...++.+...|.+|+++++++++..... .-+. .++  |..+  .+.+.+.- +++|+||.++|
T Consensus       150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~lGa~~vi--~~~~~~~~~~~~~~~~g~Dvv~d~~g  226 (346)
T 3fbg_A          150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTK-KMGADIVL--NHKESLLNQFKTQGIELVDYVFCTFN  226 (346)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHH-HHTCSEEE--CTTSCHHHHHHHHTCCCEEEEEESSC
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hcCCcEEE--ECCccHHHHHHHhCCCCccEEEECCC
Confidence            3578999999999999999999999999999998754421100 0111 222  2222  22333331 26899999976


Q ss_pred             c
Q 023205          131 G  131 (286)
Q Consensus       131 ~  131 (286)
                      .
T Consensus       227 ~  227 (346)
T 3fbg_A          227 T  227 (346)
T ss_dssp             H
T ss_pred             c
Confidence            4

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=96.60  E-value=0.004  Score=54.31  Aligned_cols=74  Identities=15%  Similarity=0.126  Sum_probs=53.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEecc----------------CCC------Hh
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGN----------------LLS------SD  113 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~D----------------l~d------~~  113 (286)
                      ..+|+|+|+ |-+|...++.+...|.+|+++++++.+..... .-+.+++..+                +++      .+
T Consensus       190 ~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~-~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~~  267 (405)
T 4dio_A          190 AAKIFVMGA-GVAGLQAIATARRLGAVVSATDVRPAAKEQVA-SLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQAA  267 (405)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSTTHHHHHH-HTTCEECCCCC-----------------CHHHHHHHH
T ss_pred             CCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH-HcCCceeecccccccccccccchhhhcchhhhhhhHh
Confidence            568999998 99999999999999999999999976521111 1133333322                222      24


Q ss_pred             HHHHHhcCCCEEEEcccc
Q 023205          114 SWKEALDGVTAVISCVGG  131 (286)
Q Consensus       114 ~~~~~~~~~d~vi~~a~~  131 (286)
                      .+.++++++|+||.++..
T Consensus       268 ~l~e~l~~aDVVI~tvli  285 (405)
T 4dio_A          268 LVAEHIAKQDIVITTALI  285 (405)
T ss_dssp             HHHHHHHTCSEEEECCCC
T ss_pred             HHHHHhcCCCEEEECCcC
Confidence            788889999999998753

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=96.58  E-value=0.0033  Score=53.74  Aligned_cols=96  Identities=21%  Similarity=0.155  Sum_probs=60.3

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCH---hHHHHHhcCCCEEEEcccc
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSS---DSWKEALDGVTAVISCVGG  131 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~---~~~~~~~~~~d~vi~~a~~  131 (286)
                      ..++|||+|+ |.+|..+++.+...|.+|++++|++++..... .-+...+ .|..+.   +.+.+...++|+||+++|.
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~lGa~~~-~d~~~~~~~~~~~~~~~~~d~vid~~g~  240 (339)
T 1rjw_A          164 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAK-ELGADLV-VNPLKEDAAKFMKEKVGGVHAAVVTAVS  240 (339)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTCSEE-ECTTTSCHHHHHHHHHSSEEEEEESSCC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HCCCCEE-ecCCCccHHHHHHHHhCCCCEEEECCCC
Confidence            3579999999 77999999999999999999998765421111 1122222 355443   2333333679999999874


Q ss_pred             CCCcchhhhhhhHHHHHHHHHHHHcCCCEEEEEec
Q 023205          132 FGSNSYMYKINGTANINAIRAASEKGVKRFVYISA  166 (286)
Q Consensus       132 ~~~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss  166 (286)
                      .           ......++.++..|  +++.++.
T Consensus       241 ~-----------~~~~~~~~~l~~~G--~~v~~g~  262 (339)
T 1rjw_A          241 K-----------PAFQSAYNSIRRGG--ACVLVGL  262 (339)
T ss_dssp             H-----------HHHHHHHHHEEEEE--EEEECCC
T ss_pred             H-----------HHHHHHHHHhhcCC--EEEEecc
Confidence            1           01223344444443  7887776

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=96.58  E-value=0.0019  Score=57.54  Aligned_cols=39  Identities=18%  Similarity=0.233  Sum_probs=34.1

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCc
Q 023205           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRS   92 (286)
Q Consensus        54 ~~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~   92 (286)
                      ...++|||+||+|.+|...++.+...|.+|+++++++++
T Consensus       219 ~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~  257 (447)
T 4a0s_A          219 KQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQK  257 (447)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHH
Confidence            346799999999999999999999999999999986544

>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A

Probab=96.58  E-value=0.0015  Score=54.31  Aligned_cols=69  Identities=19%  Similarity=0.194  Sum_probs=49.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccccC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGF  132 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~~  132 (286)
                      .++|+|.|+ |.+|+.++..|.+.|.+|++.+|+.++.......-++++  .+     ++.+.++++|+||.+.+..
T Consensus       129 ~~~v~iiGa-G~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~~~~g~~~--~~-----~~~~~~~~aDiVi~atp~~  197 (275)
T 2hk9_A          129 EKSILVLGA-GGASRAVIYALVKEGAKVFLWNRTKEKAIKLAQKFPLEV--VN-----SPEEVIDKVQVIVNTTSVG  197 (275)
T ss_dssp             GSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSHHHHHHHTTTSCEEE--CS-----CGGGTGGGCSEEEECSSTT
T ss_pred             CCEEEEECc-hHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHcCCee--eh-----hHHhhhcCCCEEEEeCCCC
Confidence            578999996 999999999999999999999998654221111112222  11     2345677899999998764

>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*

Probab=96.57  E-value=0.0062  Score=51.39  Aligned_cols=79  Identities=20%  Similarity=0.107  Sum_probs=55.0

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCccccc--ccCCc-eeEEeccCCCHhHHHHHhcCCCEEEEccc
Q 023205           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRD--SWANN-VIWHQGNLLSSDSWKEALDGVTAVISCVG  130 (286)
Q Consensus        54 ~~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~--~~~~~-~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~  130 (286)
                      ...++++|.|++..+|+.+++.|+..|.+|++++|+.......  ..... ........++++++.+.++++|+||.+.+
T Consensus       175 l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~la~~~~~~t~~~~t~~~~L~e~l~~ADIVIsAtg  254 (320)
T 1edz_A          175 LYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSEDLLKKCSLDSDVVITGVP  254 (320)
T ss_dssp             TTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCCCEEEEEEECCHHHHHHHHHHCSEEEECCC
T ss_pred             CCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHHHHhhhcccccccccccHhHHHHHhccCCEEEECCC
Confidence            4578999999988899999999999999999998874321110  00111 11111111345789999999999999987


Q ss_pred             cC
Q 023205          131 GF  132 (286)
Q Consensus       131 ~~  132 (286)
                      ..
T Consensus       255 ~p  256 (320)
T 1edz_A          255 SE  256 (320)
T ss_dssp             CT
T ss_pred             CC
Confidence            64

>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}

Probab=96.56  E-value=0.00095  Score=54.46  Aligned_cols=67  Identities=9%  Similarity=0.106  Sum_probs=46.8

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCC----eEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEcc
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGL----TVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCV  129 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~----~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a  129 (286)
                      |+++|.|.| .|.+|..+++.|++.|+    +|++.+|++++........++..    .   .+..++++++|+||.+.
T Consensus         1 M~~~i~iIG-~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~g~~~----~---~~~~e~~~~aDvVilav   71 (247)
T 3gt0_A            1 MDKQIGFIG-CGNMGMAMIGGMINKNIVSSNQIICSDLNTANLKNASEKYGLTT----T---TDNNEVAKNADILILSI   71 (247)
T ss_dssp             CCCCEEEEC-CSHHHHHHHHHHHHTTSSCGGGEEEECSCHHHHHHHHHHHCCEE----C---SCHHHHHHHCSEEEECS
T ss_pred             CCCeEEEEC-ccHHHHHHHHHHHhCCCCCCCeEEEEeCCHHHHHHHHHHhCCEE----e---CChHHHHHhCCEEEEEe
Confidence            357899999 59999999999999998    99999998654221110012221    1   22445667789999887

>1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1

Probab=96.54  E-value=0.0051  Score=52.70  Aligned_cols=33  Identities=18%  Similarity=0.313  Sum_probs=28.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC-eEEEEec
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGL-TVASLSR   88 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~-~V~~l~R   88 (286)
                      |.+|.|.||||++|..+++.|.++.. ++..+.-
T Consensus        13 ~~~V~IvGAtG~vG~ellrlL~~hP~~el~~l~S   46 (351)
T 1vkn_A           13 MIRAGIIGATGYTGLELVRLLKNHPEAKITYLSS   46 (351)
T ss_dssp             CEEEEEESTTSHHHHHHHHHHHHCTTEEEEEEEC
T ss_pred             eeEEEEECCCCHHHHHHHHHHHcCCCcEEEEEeC
Confidence            66899999999999999999999864 7766653

>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*

Probab=96.54  E-value=0.011  Score=49.24  Aligned_cols=89  Identities=19%  Similarity=0.207  Sum_probs=57.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhc--CCCEEEEccccCC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD--GVTAVISCVGGFG  133 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~--~~d~vi~~a~~~~  133 (286)
                      ..+|+|.|+||.+|+.+++.+.+.|+++++.+ ++.+.-.+  ..++.+       ..+++++.+  ++|+++.+..+  
T Consensus         7 ~~rVaViG~sG~~G~~~~~~l~~~g~~~V~~V-~p~~~g~~--~~G~~v-------y~sl~el~~~~~~D~viI~tP~--   74 (288)
T 2nu8_A            7 NTKVICQGFTGSQGTFHSEQAIAYGTKMVGGV-TPGKGGTT--HLGLPV-------FNTVREAVAATGATASVIYVPA--   74 (288)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHHTCEEEEEE-CTTCTTCE--ETTEEE-------ESSHHHHHHHHCCCEEEECCCG--
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEe-CCCcccce--eCCeec-------cCCHHHHhhcCCCCEEEEecCH--
Confidence            46899999999999999999999888865443 22211001  112222       123445555  79999988654  


Q ss_pred             CcchhhhhhhHHHHHHHHHHHHcCCCEEEEEec
Q 023205          134 SNSYMYKINGTANINAIRAASEKGVKRFVYISA  166 (286)
Q Consensus       134 ~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss  166 (286)
                                .....+++.|.+.|++.+|.+++
T Consensus        75 ----------~~~~~~~~ea~~~Gi~~iVi~t~   97 (288)
T 2nu8_A           75 ----------PFCKDSILEAIDAGIKLIITITE   97 (288)
T ss_dssp             ----------GGHHHHHHHHHHTTCSEEEECCC
T ss_pred             ----------HHHHHHHHHHHHCCCCEEEEECC
Confidence                      12345677777888876565554

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=96.53  E-value=0.004  Score=53.97  Aligned_cols=74  Identities=20%  Similarity=0.148  Sum_probs=51.9

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEcccc
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG  131 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~  131 (286)
                      ...+|||+|+ |.+|...++.+...|.+|+++++++++..... .-+...+ .|..+.+.++++..++|+||.++|.
T Consensus       194 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~-~lGa~~v-i~~~~~~~~~~~~~g~Dvvid~~g~  267 (369)
T 1uuf_A          194 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAK-ALGADEV-VNSRNADEMAAHLKSFDFILNTVAA  267 (369)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH-HHTCSEE-EETTCHHHHHTTTTCEEEEEECCSS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCcEE-eccccHHHHHHhhcCCCEEEECCCC
Confidence            3578999998 88999999998889999999998765521110 0122211 2555555555555789999999875

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=96.52  E-value=0.00066  Score=61.76  Aligned_cols=70  Identities=16%  Similarity=0.185  Sum_probs=43.8

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc--cccCCceeEEeccCCCHhHHHH-HhcCCCEEEEcccc
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSWANNVIWHQGNLLSSDSWKE-ALDGVTAVISCVGG  131 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~--~~~~~~~~~i~~Dl~d~~~~~~-~~~~~d~vi~~a~~  131 (286)
                      ..++++|||| |.+|+.++..|++.|.+|++++|+.++...  .....  +++  ++.|   +.+ ....+|++|||+|.
T Consensus       363 ~~k~vlV~Ga-GGig~aia~~L~~~G~~V~i~~R~~~~a~~la~~~~~--~~~--~~~d---l~~~~~~~~DilVN~agv  434 (523)
T 2o7s_A          363 ASKTVVVIGA-GGAGKALAYGAKEKGAKVVIANRTYERALELAEAIGG--KAL--SLTD---LDNYHPEDGMVLANTTSM  434 (523)
T ss_dssp             ---CEEEECC-SHHHHHHHHHHHHHCC-CEEEESSHHHHHHHHHHTTC---CE--ETTT---TTTC--CCSEEEEECSST
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCC--cee--eHHH---hhhccccCceEEEECCCC
Confidence            3568999999 799999999999999999999998654211  11111  111  1212   222 12458999999986


Q ss_pred             C
Q 023205          132 F  132 (286)
Q Consensus       132 ~  132 (286)
                      .
T Consensus       435 g  435 (523)
T 2o7s_A          435 G  435 (523)
T ss_dssp             T
T ss_pred             C
Confidence            3

>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}

Probab=96.52  E-value=0.0011  Score=55.83  Aligned_cols=37  Identities=19%  Similarity=0.258  Sum_probs=32.5

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCc
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRS   92 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~   92 (286)
                      ++++|.|.| .|.+|..+++.|.+.|++|++.+|++++
T Consensus         6 ~~~~I~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~   42 (303)
T 3g0o_A            6 TDFHVGIVG-LGSMGMGAARSCLRAGLSTWGADLNPQA   42 (303)
T ss_dssp             -CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             CCCeEEEEC-CCHHHHHHHHHHHHCCCeEEEEECCHHH
Confidence            356899998 5999999999999999999999998654

>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}

Probab=96.51  E-value=0.0015  Score=55.32  Aligned_cols=68  Identities=21%  Similarity=0.112  Sum_probs=47.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCC-CcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEcccc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSG-RSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG  131 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~-~V~~l~R~~-~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~  131 (286)
                      +++|.|.|. |.+|..+++.|.+.|+ +|++.+|++ ..........++..       ..+..++++++|+||.+..+
T Consensus        24 ~~~I~iIG~-G~mG~~~A~~L~~~G~~~V~~~dr~~~~~~~~~~~~~g~~~-------~~~~~e~~~~aDvVi~~vp~   93 (312)
T 3qsg_A           24 AMKLGFIGF-GEAASAIASGLRQAGAIDMAAYDAASAESWRPRAEELGVSC-------KASVAEVAGECDVIFSLVTA   93 (312)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHHSCCEEEEECSSCHHHHHHHHHHTTCEE-------CSCHHHHHHHCSEEEECSCT
T ss_pred             CCEEEEECc-cHHHHHHHHHHHHCCCCeEEEEcCCCCHHHHHHHHHCCCEE-------eCCHHHHHhcCCEEEEecCc
Confidence            579999995 9999999999999999 999999974 22111111123322       12345667789999998755

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=96.51  E-value=0.0019  Score=55.42  Aligned_cols=97  Identities=19%  Similarity=0.146  Sum_probs=59.7

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCCCcccccccCCceeEEeccCCCHh---HHHHHhc--CCCEEEEc
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSLRDSWANNVIWHQGNLLSSD---SWKEALD--GVTAVISC  128 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~---~~~~~~~--~~d~vi~~  128 (286)
                      ...+|||+|+ |.+|..+++.+...|. +|++++|++++.... ..-+...+ .|..+.+   .+.+...  ++|+||.+
T Consensus       167 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~-~~~Ga~~~-~~~~~~~~~~~v~~~~~g~g~D~vid~  243 (348)
T 2d8a_A          167 SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELA-KKVGADYV-INPFEEDVVKEVMDITDGNGVDVFLEF  243 (348)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHHH-HHHTCSEE-ECTTTSCHHHHHHHHTTTSCEEEEEEC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHhCCCEE-ECCCCcCHHHHHHHHcCCCCCCEEEEC
Confidence            4678999999 9999999999999998 999999885442111 01122211 2443322   2333332  68999999


Q ss_pred             cccCCCcchhhhhhhHHHHHHHHHHHHcCCCEEEEEecC
Q 023205          129 VGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAA  167 (286)
Q Consensus       129 a~~~~~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~  167 (286)
                      +|..           ......++.++..|  +++.+++.
T Consensus       244 ~g~~-----------~~~~~~~~~l~~~G--~iv~~g~~  269 (348)
T 2d8a_A          244 SGAP-----------KALEQGLQAVTPAG--RVSLLGLY  269 (348)
T ss_dssp             SCCH-----------HHHHHHHHHEEEEE--EEEECCCC
T ss_pred             CCCH-----------HHHHHHHHHHhcCC--EEEEEccC
Confidence            8741           11123344444333  78888763

>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}

Probab=96.50  E-value=0.009  Score=49.76  Aligned_cols=56  Identities=20%  Similarity=0.300  Sum_probs=47.3

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHH--HHhcCCCEEEEccccC
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWK--EALDGVTAVISCVGGF  132 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~--~~~~~~d~vi~~a~~~  132 (286)
                      ..++++|.|++|.+|+.++..|+..|.+|+++.|+..                      ++.  +.++.+|+||.+.+..
T Consensus       164 ~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T~----------------------~l~l~~~~~~ADIVI~Avg~p  221 (300)
T 4a26_A          164 AGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSGTS----------------------TEDMIDYLRTADIVIAAMGQP  221 (300)
T ss_dssp             TTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTSC----------------------HHHHHHHHHTCSEEEECSCCT
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCCC----------------------CchhhhhhccCCEEEECCCCC
Confidence            5789999999999999999999999999999987422                      233  7888999999998753

>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}

Probab=96.49  E-value=0.0034  Score=52.41  Aligned_cols=65  Identities=14%  Similarity=0.163  Sum_probs=44.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVG  130 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~  130 (286)
                      ||+|.|.| .|.+|..+++.|.+.|++|++.+ +++.... ....++.       -..+..++++++|+||.+..
T Consensus         3 ~m~i~iiG-~G~~G~~~a~~l~~~g~~V~~~~-~~~~~~~-~~~~g~~-------~~~~~~~~~~~~D~vi~~vp   67 (295)
T 1yb4_A            3 AMKLGFIG-LGIMGSPMAINLARAGHQLHVTT-IGPVADE-LLSLGAV-------NVETARQVTEFADIIFIMVP   67 (295)
T ss_dssp             -CEEEECC-CSTTHHHHHHHHHHTTCEEEECC-SSCCCHH-HHTTTCB-------CCSSHHHHHHTCSEEEECCS
T ss_pred             CCEEEEEc-cCHHHHHHHHHHHhCCCEEEEEc-CHHHHHH-HHHcCCc-------ccCCHHHHHhcCCEEEEECC
Confidence            46899999 59999999999999999999887 6544211 1111221       11234556678898888864

>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*

Probab=96.49  E-value=0.008  Score=53.02  Aligned_cols=74  Identities=15%  Similarity=0.096  Sum_probs=47.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc--ccc----CCcee-EE---eccCCCHhHHHHHhcCCCEE
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSW----ANNVI-WH---QGNLLSSDSWKEALDGVTAV  125 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~--~~~----~~~~~-~i---~~Dl~d~~~~~~~~~~~d~v  125 (286)
                      +|+|.|.|+ |++|..++..|.+ |++|++.+|++++...  ...    .++++ ++   .+.+.-..++.++++++|+|
T Consensus        36 ~mkIaVIGl-G~mG~~lA~~La~-G~~V~~~D~~~~~v~~l~~g~~~i~e~~l~~ll~~~~~~l~~ttd~~ea~~~aDvV  113 (432)
T 3pid_A           36 FMKITISGT-GYVGLSNGVLIAQ-NHEVVALDIVQAKVDMLNQKISPIVDKEIQEYLAEKPLNFRATTDKHDAYRNADYV  113 (432)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHT-TSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHHTTCSEE
T ss_pred             CCEEEEECc-CHHHHHHHHHHHc-CCeEEEEecCHHHhhHHhccCCccccccHHHHHhhccCCeEEEcCHHHHHhCCCEE
Confidence            579999995 9999999998887 9999999998754211  100    00000 00   00111112355678899999


Q ss_pred             EEcccc
Q 023205          126 ISCVGG  131 (286)
Q Consensus       126 i~~a~~  131 (286)
                      |-+.+.
T Consensus       114 iiaVPt  119 (432)
T 3pid_A          114 IIATPT  119 (432)
T ss_dssp             EECCCC
T ss_pred             EEeCCC
Confidence            998654

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	286
d1hdoa_	205	c.2.1.2 (A:) Biliverdin IX beta reductase {Human (	1e-20
d2b69a1	312	c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1	2e-15
d1e6ua_	315	c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimeras	2e-15
d1db3a_	357	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric	8e-15
d1qyda_	312	c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {	7e-14
d1r6da_	322	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	1e-13
d1t2aa_	347	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H	4e-12
d1xgka_	350	c.2.1.2 (A:) Negative transcriptional regulator Nm	9e-12
d2c5aa1	363	c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {T	1e-11
d2bkaa1	232	c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {H	2e-11
d2a35a1	212	c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pse	2e-11
d1udca_	338	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	2e-11
d1kewa_	361	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	2e-10
d1qyca_	307	c.2.1.2 (A:) Phenylcoumaran benzylic ether reducta	9e-10
d1orra_	338	c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella	9e-10
d2q46a1	252	c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (	8e-09
d1oc2a_	346	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	2e-08
d1ek6a_	346	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	2e-08
d1y1pa1	342	c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo	7e-08
d2blla1	342	c.2.1.2 (A:316-657) Polymyxin resistance protein A	7e-08
d1z45a2	347	c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-ep	7e-08
d1rkxa_	356	c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia	1e-07
d1vl0a_	281	c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD	5e-07
d1sb8a_	341	c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase W	1e-06
d1rpna_	321	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomo	4e-06
d1n2sa_	298	c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reduct	5e-06
d1i24a_	393	c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1	6e-06
d1n7ha_	339	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cr	1e-05
d1eq2a_	307	c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimer	1e-05
d1gy8a_	383	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	7e-04

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 205

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 85.5 bits (210), Expect = 1e-20
 Identities = 36/213 (16%), Positives = 61/213 (28%), Gaps = 29/213 (13%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKE 117
           K+ + G  G  G     +A+  G  V  L R   S L            G++L +    +
Sbjct: 5   KIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDS-SRLPSEGPRPAHVVVGDVLQAADVDK 63

Query: 118 ALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGV----AN 173
            + G  AVI  +G     S    +      N + A    GV + V  ++A          
Sbjct: 64  TVAGQDAVIVLLGTRNDLSPTT-VMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKVP 122

Query: 174 YLLQGYYEGKRAAETELLTRYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHA 233
             LQ   +       ++L       V + P  I      G   + L              
Sbjct: 123 PRLQAVTDDHIRMH-KVLRESGLKYVAVMPPHIGDQPLTGAYTVTLD------------- 168

Query: 234 KPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDP 266
                    G   +  ++   +    +R  T  
Sbjct: 169 ---------GRGPSRVISKHDLGHFMLRCLTTD 192

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.2 bits (179), Expect = 2e-15
 Identities = 35/178 (19%), Positives = 61/178 (34%), Gaps = 27/178 (15%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKE 117
           ++L+ GG GFVGSH+  + +  G  V  +        + +  + +      L++ D  + 
Sbjct: 3   RILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGR-KRNVEHWIGHENFELINHDVVEP 61

Query: 118 ALDGVTAVI-----SCVGGFGSN-SYMYKINGTANINAIRAASEKGVKRFVYISAA---- 167
               V  +      +    +  N     K N    +N +  A   G  R +  S +    
Sbjct: 62  LYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA-RLLLASTSEVYG 120

Query: 168 ----------DFGVANYL--LQGYYEGKRAAETELLT---RYPYGGVILRPGFIYGTR 210
                      +G  N +     Y EGKR AET       +      + R    +G R
Sbjct: 121 DPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPR 178

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} Length = 315

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

 Score = 73.0 bits (178), Expect = 2e-15
 Identities = 35/176 (19%), Positives = 58/176 (32%), Gaps = 33/176 (18%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKE 117
           ++ + G  G VGS I R+   RG     L      +L DS A +  +            E
Sbjct: 4   RVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDELNLLDSRAVHDFFA----------SE 53

Query: 118 ALDGVTAVISCVGGFGSNSYM----YKINGTANINAIRAASEKGVKRFVYISAA------ 167
            +D V    + VGG  +N+         N     N I AA +  V + +++ ++      
Sbjct: 54  RIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKL 113

Query: 168 ----------DFGVANYLLQGYYEGKRAAETELLT---RYPYGGVILRPGFIYGTR 210
                       G      + Y   K A      +   +Y      + P  +YG  
Sbjct: 114 AKQPMAESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPH 169

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

 Score = 71.4 bits (174), Expect = 8e-15
 Identities = 37/211 (17%), Positives = 62/211 (29%), Gaps = 37/211 (17%)

Query: 56  SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWAN----------NVIWH 105
           S+  L+ G  G  GS++    L++G  V  + R   S   +   +              H
Sbjct: 1   SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLH 60

Query: 106 QGNLLSSDSWKEALDG--------VTAVISCVGGFGSNSYMYKIN--GTANI-NAIRAAS 154
            G+L  + +    L          + A+      F S  Y   ++  GT  +  AIR   
Sbjct: 61  YGDLSDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLG 120

Query: 155 EKGVKRFVYIS-AADFGVANYLLQG----------YYEGKRAAETELLT---RYPYGGVI 200
            +   RF   S +  +G+   + Q           Y   K  A    +     Y      
Sbjct: 121 LEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYGMYACN 180

Query: 201 LRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQ 231
                    R   G       I   +  + Q
Sbjct: 181 GILFNHESPR--RGETFVTRKITRAIANIAQ 209

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

 Score = 68.3 bits (165), Expect = 7e-14
 Identities = 29/231 (12%), Positives = 63/231 (27%), Gaps = 25/231 (10%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSS-------LRDSWANNVIWHQGNLL 110
           ++L++GG G++G  I   ++  G     L R    S       L           + +L 
Sbjct: 5   RVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLD 64

Query: 111 SSDSWKEALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAA--- 167
                 +AL  V  VIS +        +   +    +  + A  E G  +    S     
Sbjct: 65  DHQRLVDALKQVDVVISAL-----AGGVLSHHILEQLKLVEAIKEAGNIKRFLPSEFGMD 119

Query: 168 -DFGVANYLLQGYYEGKRAAETELLTRYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPM 226
            D               +      +         +      G       +L   ++    
Sbjct: 120 PDIMEHALQPGSITFIDKRKVRRAIEAASIPYTYVSSNMFAGYFAGSLAQLDGHMMPPRD 179

Query: 227 EMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDPVFPPGIVDVHG 277
           ++++              +    V+   V    +++  DP      + +  
Sbjct: 180 KVLIYGDG---------NVKGIWVDEDDVGTYTIKSIDDPQTLNKTMYIRP 221

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} Length = 322

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

 Score = 67.5 bits (164), Expect = 1e-13
 Identities = 41/193 (21%), Positives = 67/193 (34%), Gaps = 31/193 (16%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTVA---------SLSRSG-RSSLRDSWAN-NVIWHQ 106
           +LLV GG GF+GSH  R+ L                SL+ +G R++L    A+  + +  
Sbjct: 2   RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVH 61

Query: 107 GNLLSSDSWKEALDGVTAVISC------VGGFGSNSYMYKINGTANINAIRAASEKGVKR 160
           G++  +      L GV A++               S   + N       ++ A + GV R
Sbjct: 62  GDIRDAGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGR 121

Query: 161 FVYIS-AADFGVANYLLQG----------YYEGKRAAETELLT---RYPYGGVILRPGFI 206
            V++S    +G  +               Y   K  ++         Y     I R    
Sbjct: 122 VVHVSTNQVYGSIDSGSWTESSPLEPNSPYAASKAGSDLVARAYHRTYGLDVRITRCCNN 181

Query: 207 YGTRTVGGMKLPL 219
           YG        +PL
Sbjct: 182 YGPYQHPEKLIPL 194

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.1 bits (152), Expect = 4e-12
 Identities = 31/187 (16%), Positives = 56/187 (29%), Gaps = 36/187 (19%)

Query: 60  LVLGGNGFVGSHICREALDRGLTVASLSRSGRSS-----------LRDSWANNVIWHQGN 108
           L+ G  G  GS++    L++G  V  + R   S             +     N+  H G+
Sbjct: 5   LITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGD 64

Query: 109 LLSSDSWKEALDG--------VTAVISCVGGFGSNSYMYKIN--GTANI-NAIRAASEKG 157
           L  S    + ++         + A       F    Y   ++  GT  + +A++      
Sbjct: 65  LTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLIN 124

Query: 158 VKRFVYIS-AADFGVANYLLQG----------YYEGKRAAETELLT---RYPYGGVILRP 203
             +F   S +  +G    + Q           Y   K  A   ++     Y    V    
Sbjct: 125 SVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFREAYNLFAVNGIL 184

Query: 204 GFIYGTR 210
                 R
Sbjct: 185 FNHESPR 191

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} Length = 350

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

 Score = 62.4 bits (150), Expect = 9e-12
 Identities = 26/212 (12%), Positives = 53/212 (25%), Gaps = 14/212 (6%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWAN--NVIWHQGNLLSSDSW 115
            + V+G  G  G+ + R A   G  V +   S +  + +      NV   QG LL++   
Sbjct: 5   TIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPL 64

Query: 116 KEALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGVANYL 175
            + L     +        +   +         +   AA   G  +    S+         
Sbjct: 65  MDTLFEGAHLAFINTTSQAGDEIA-----IGKDLADAAKRAGTIQHYIYSSMPDHSLYGP 119

Query: 176 LQGYYEGK-RAAETELLTRYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAK 234
                    +      + +       +  G          +  PL  +    +   +   
Sbjct: 120 WPAVPMWAPKFTVENYVRQLGLPSTFVYAGIYNN--NFTSLPYPLFQMELMPDGTFEWHA 177

Query: 235 PLSQLPLVGPLFTPPVNVTVVAKVAVRAATDP 266
           P                   V    ++   D 
Sbjct: 178 PFDP----DIPLPWLDAEHDVGPALLQIFKDG 205

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 363

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 62.3 bits (150), Expect = 1e-11
 Identities = 37/181 (20%), Positives = 59/181 (32%), Gaps = 29/181 (16%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKE 117
           K+ + G  GF+ SHI R     G  V +     ++           +H  +L   ++  +
Sbjct: 17  KISITGAGGFIASHIARRLKHEGHYVIASDWK-KNEHMTEDMFCDEFHLVDLRVMENCLK 75

Query: 118 ALDGVTAVISC-------VGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAADFG 170
             +GV  V +             ++S +   N   + N I AA   G+KRF Y S+A   
Sbjct: 76  VTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIY 135

Query: 171 VANYLLQG------------------YYEGKRAAETELLT---RYPYGGVILRPGFIYGT 209
                L+                   +   K A E         +     I R   IYG 
Sbjct: 136 PEFKQLETTNVSLKESDAWPAEPQDAFGLEKLATEELCKHYNKDFGIECRIGRFHNIYGP 195

Query: 210 R 210
            
Sbjct: 196 F 196

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} Length = 232

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.6 bits (145), Expect = 2e-11
 Identities = 33/214 (15%), Positives = 63/214 (29%), Gaps = 21/214 (9%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKE 117
            + +LG +G  G  + +E L++GL         R    D  A   +  +           
Sbjct: 16  SVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLDDYA 75

Query: 118 ALDGVTAVISCVGGF----GSNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGVAN 173
           +      V  C  G            +++    + +   A   G K F  +S+     ++
Sbjct: 76  SAFQGHDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADKSS 135

Query: 174 YLLQGYYEGKRAAETELLTRYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHA 233
                Y + K   E ++         + RPG +   R              P E +++  
Sbjct: 136 N--FLYLQVKGEVEAKVEELKFDRYSVFRPGVLLCDRQE----------SRPGEWLVRKF 183

Query: 234 KPLSQLPLVGPLFT-PPVNVTVVAKVAVRAATDP 266
                  L     +   V V  V +  +     P
Sbjct: 184 FG----SLPDSWASGHSVPVVTVVRAMLNNVVRP 213

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 60.2 bits (144), Expect = 2e-11
 Identities = 32/228 (14%), Positives = 68/228 (29%), Gaps = 19/228 (8%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKE 117
           ++L+ G  G  G H+    L        ++ + R +L +    +        L       
Sbjct: 4   RVLLAGATGLTGEHLLDRILSEPTLAKVIAPA-RKALAEHPRLDNPVGPLAELLPQLDGS 62

Query: 118 ALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGVANYLLQ 177
                  + + +   GS      ++    +   + A E G + ++ +SA      +    
Sbjct: 63  IDTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADAKSS--I 120

Query: 178 GYYEGKRAAETELLTRYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLS 237
            Y   K   E  L  +      I RP  ++G R                E  L       
Sbjct: 121 FYNRVKGELEQALQEQGWPQLTIARPSLLFGPR---------------EEFRLAEILAAP 165

Query: 238 QLPLVGPLFTPPVNVTVVAKVAVRAATDPVFPPGIVDVHGILRYSQKS 285
              ++   +   +    +A+   R A +       V+   + +  + S
Sbjct: 166 IARILPGKYH-GIEACDLARALWRLALEEGKGVRFVESDELRKLGKGS 212

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

 Score = 61.1 bits (147), Expect = 2e-11
 Identities = 46/208 (22%), Positives = 73/208 (35%), Gaps = 31/208 (14%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTV---ASLSRSGRSSL---RDSWANNVIWHQGNLLS 111
           ++LV GG+G++GSH C + L  G  V    +L  S RS L         +  + +G++ +
Sbjct: 2   RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRN 61

Query: 112 SDSWKEAL-----DGV--TAVISCVGGFGSN-SYMYKINGTANINAIRAASEKGVKRFVY 163
                E L     D V   A +  VG         Y  N    +  I A     VK F++
Sbjct: 62  EALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIF 121

Query: 164 ISA------------ADFGVANYLLQGYYEGKRAAET----ELLTRYPYGGVILRPGFIY 207
            S+             +          Y + K   E         +  +   +LR     
Sbjct: 122 SSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPV 181

Query: 208 GTRTVGGM-KLPLGVIGSPMEMVLQHAK 234
           G    G M + P G+  + M  + Q A 
Sbjct: 182 GAHPSGDMGEDPQGIPNNLMPYIAQVAV 209

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 58.6 bits (141), Expect = 2e-10
 Identities = 30/209 (14%), Positives = 60/209 (28%), Gaps = 47/209 (22%)

Query: 58  KLLVLGGNGFVGSHICREALDRG----LTVASLSRSGRSSLRDSWA--NNVIWHQGNLLS 111
           K+L+ GG GF+GS + R  +       + +  L+ +G        +  N   +   ++  
Sbjct: 2   KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICD 61

Query: 112 SDSWKEALDGVT-------AVISCVGGFGSN-SYMYKINGTANINAIRAASEKGVK---- 159
           S       +          A  S V    +  +   + N       +  A +        
Sbjct: 62  SAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGED 121

Query: 160 -----RFVYIS-AADFGVANYLLQG--------------------YYEGKRAAETELLT- 192
                RF +IS    +G   +  +                     Y   K +++  +   
Sbjct: 122 KKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRAW 181

Query: 193 --RYPYGGVILRPGFIYGTRTVGGMKLPL 219
              Y    ++      YG        +PL
Sbjct: 182 RRTYGLPTIVTNCSNNYGPYHFPEKLIPL 210

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

 Score = 55.9 bits (133), Expect = 9e-10
 Identities = 35/228 (15%), Positives = 63/228 (27%), Gaps = 24/228 (10%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSS--------LRDSWANNVIWHQGNL 109
           ++L++G  G++G H+ + +LD G     L R   +S        L    A+      G++
Sbjct: 5   RILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSI 64

Query: 110 LSSDSWKEALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAADF 169
               S  EA+  V  VIS VG       +   +    I AI+                  
Sbjct: 65  DDHASLVEAVKNVDVVISTVG------SLQIESQVNIIKAIKEVGTVKRFFPSEFGNDVD 118

Query: 170 GVANYLLQGYYEGKRAAETELLTRYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMV 229
            V            +A     +         +      G       +  L        ++
Sbjct: 119 NVHAVEPAKSVFEVKAKVRRAIEAEGIPYTYVSSNCFAGYFLRSLAQAGLTAPPRDKVVI 178

Query: 230 LQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDPVFPPGIVDVHG 277
           L                   V    +    ++A  DP      + +  
Sbjct: 179 LGDGNA----------RVVFVKEEDIGTFTIKAVDDPRTLNKTLYLRL 216

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

 Score = 56.3 bits (134), Expect = 9e-10
 Identities = 24/122 (19%), Positives = 45/122 (36%), Gaps = 14/122 (11%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWA-----NNVIWHQGNLLSS 112
           KLL+ GG GF+GS++   AL +G+ +       R    D+        N  +  G++ + 
Sbjct: 2   KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNK 61

Query: 113 DSWKEALDGV-------TAVISCVGGFGSN-SYMYKINGTANINAIRAASEKGVK-RFVY 163
           +     +           A    +     N    ++IN    +N + A  +       +Y
Sbjct: 62  NDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIY 121

Query: 164 IS 165
            S
Sbjct: 122 SS 123

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 52.9 bits (125), Expect = 8e-09
 Identities = 22/214 (10%), Positives = 52/214 (24%), Gaps = 9/214 (4%)

Query: 60  LVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEAL 119
           LV G +G  G  + ++  +      +      +  ++          G++  +DS   A 
Sbjct: 7   LVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEADVFIGDITDADSINPAF 66

Query: 120 DGVTAVISCVGGFGSNSYMYKINGTA-------NINAIRAASEKGVKRFVYISAADFGVA 172
            G+ A++            +             +          G K  +  +       
Sbjct: 67  QGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKH 126

Query: 173 NYLLQGYYEGKRAAETELLTRYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQH 232
             ++              L          +              +  G +      V   
Sbjct: 127 IVVVGSMGGTNPDHPLNKLGNGNILVWKRKAEQYLADSGTPYTIIRAGGLLDKEGGV--R 184

Query: 233 AKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDP 266
              + +   +    T  V    VA+V ++A    
Sbjct: 185 ELLVGKDDELLQTDTKTVPRADVAEVCIQALLFE 218

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 52.3 bits (124), Expect = 2e-08
 Identities = 25/190 (13%), Positives = 54/190 (28%), Gaps = 37/190 (19%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTVA-----SLSRSG-RSSLRDSWANNVIWHQGNLLS 111
            ++V GG GF+GS+      +    V       L+ +G +++L     + V    G++  
Sbjct: 4   NIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIAD 63

Query: 112 SDSWKEALDGVT-----AVISCVGGFGSNSYMY-KINGTANINAIRAASEKGVKRFVYIS 165
           ++   +           A  S      ++   +   N       + AA +  ++     +
Sbjct: 64  AELVDKLAAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDIRFHHVST 123

Query: 166 AADFGVANYLLQG----------------------YYEGKRAAETELLT---RYPYGGVI 200
              +G                              Y   K A++  +      +     I
Sbjct: 124 DEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSFGVKATI 183

Query: 201 LRPGFIYGTR 210
                 YG  
Sbjct: 184 SNCSNNYGPY 193

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.0 bits (123), Expect = 2e-08
 Identities = 37/194 (19%), Positives = 65/194 (33%), Gaps = 36/194 (18%)

Query: 56  SEKLLVLGGNGFVGSHICREALDRGLTVA---SLSRSGRSS---------LRDSWANNVI 103
           +EK+LV GG G++GSH   E L+ G       +   + R           +++    +V 
Sbjct: 2   AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVE 61

Query: 104 WHQGNLLSSDSWKEALDGVT-------AVISCVGGFGSNSYMY-KINGTANINAIRAASE 155
           + + ++L   + +      +       A +  VG        Y ++N T  I  +     
Sbjct: 62  FEEMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKA 121

Query: 156 KGVKRFVYISAADFGV------------ANYLLQGYYEGKRAAETELLTRY----PYGGV 199
            GVK  V+ S+A                       Y + K   E  +         +  V
Sbjct: 122 HGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTWNAV 181

Query: 200 ILRPGFIYGTRTVG 213
           +LR     G    G
Sbjct: 182 LLRYFNPTGAHASG 195

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

 Score = 50.6 bits (119), Expect = 7e-08
 Identities = 15/36 (41%), Positives = 20/36 (55%)

Query: 54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRS 89
          P    +LV G NGFV SH+  + L+ G  V   +RS
Sbjct: 9  PEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARS 44

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

 Score = 50.7 bits (119), Expect = 7e-08
 Identities = 15/63 (23%), Positives = 27/63 (42%), Gaps = 1/63 (1%)

Query: 58  KLLVLGGNGFVGSHICREALDRG-LTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWK 116
           ++L+LG NGF+G+H+    L      V  L     +  R     +  + +G++     W 
Sbjct: 2   RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWI 61

Query: 117 EAL 119
           E  
Sbjct: 62  EYH 64

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 50.4 bits (119), Expect = 7e-08
 Identities = 38/192 (19%), Positives = 61/192 (31%), Gaps = 34/192 (17%)

Query: 56  SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSS------LRDSWANNVIWHQGNL 109
           S+ +LV GG G++GSH   E ++ G           S+      L     +++ +++ +L
Sbjct: 1   SKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDL 60

Query: 110 LSSDSWKEAL-----DGVT--AVISCVGGFGSNSYMY-KINGTANINAIRAASEKGVKRF 161
                 ++       D V   A +  VG        Y   N    +  +    +  V +F
Sbjct: 61  CDRKGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKF 120

Query: 162 V-YISAADFGVANYLLQG--------------YYEGKRAAE---TELLTRYPYGG--VIL 201
           V   SA  +G A                    Y   K A E    +L           IL
Sbjct: 121 VFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKYAIENILNDLYNSDKKSWKFAIL 180

Query: 202 RPGFIYGTRTVG 213
           R     G    G
Sbjct: 181 RYFNPIGAHPSG 192

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Length = 356

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

 Score = 49.5 bits (116), Expect = 1e-07
 Identities = 13/62 (20%), Positives = 23/62 (37%), Gaps = 4/62 (6%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTVASLSR--SGRSSLRDS--WANNVIWHQGNLLSSD 113
           ++ V G  GF G  +       G TV   S       SL ++   A+ +    G++   +
Sbjct: 10  RVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQN 69

Query: 114 SW 115
             
Sbjct: 70  KL 71

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} Length = 281

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

 Score = 47.5 bits (111), Expect = 5e-07
 Identities = 8/32 (25%), Positives = 15/32 (46%)

Query: 58 KLLVLGGNGFVGSHICREALDRGLTVASLSRS 89
          K+L+ G NG +G  I ++   + + V      
Sbjct: 3  KILITGANGQLGREIQKQLKGKNVEVIPTDVQ 34

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} Length = 341

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 46.9 bits (110), Expect = 1e-06
 Identities = 38/188 (20%), Positives = 63/188 (33%), Gaps = 30/188 (15%)

Query: 53  PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSR----------SGRSSLRDSWANNV 102
           P   +  L+ G  GF+GS++    L     V  L              RS + +   +N 
Sbjct: 13  PAQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNF 72

Query: 103 IWHQGNLLSSDSWKEALDGVTAVISCVGGFGSNSY------MYKINGTANINAIRAASEK 156
            + QG++ + D    A  GV  V+                     N    +N + AA + 
Sbjct: 73  KFIQGDIRNLDDCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDA 132

Query: 157 GVKRFVYI-SAADFGVANYLLQ----------GYYEGKRAAETELLT---RYPYGGVILR 202
            V+ F Y  S++ +G    L +           Y   K   E         Y +  + LR
Sbjct: 133 KVQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNELYADVFSRCYGFSTIGLR 192

Query: 203 PGFIYGTR 210
              ++G R
Sbjct: 193 YFNVFGRR 200

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} Length = 321

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 45.0 bits (105), Expect = 4e-06
 Identities = 13/65 (20%), Positives = 26/65 (40%), Gaps = 5/65 (7%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWA-----NNVIWHQGNLLSS 112
             LV G  G  G+++ +  L++G  V  L     S  R          ++ +  G++  +
Sbjct: 2   SALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADA 61

Query: 113 DSWKE 117
            S + 
Sbjct: 62  CSVQR 66

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} Length = 298

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

 Score = 44.9 bits (104), Expect = 5e-06
 Identities = 11/73 (15%), Positives = 22/73 (30%), Gaps = 15/73 (20%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKE 117
            +L+ G  G VG  + R     G  +A    S                 G+  +     E
Sbjct: 2   NILLFGKTGQVGWELQRSLAPVGNLIALDVHSKE-------------FCGDFSNPKGVAE 48

Query: 118 ALDGV--TAVISC 128
            +  +    +++ 
Sbjct: 49  TVRKLRPDVIVNA 61

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 393

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 44.6 bits (103), Expect = 6e-06
 Identities = 10/85 (11%), Positives = 26/85 (30%), Gaps = 22/85 (25%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTV---ASLSRSGRSS-------------------LR 95
           +++V+GG+G+ G         +   V    +L R                         +
Sbjct: 3   RVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWK 62

Query: 96  DSWANNVIWHQGNLLSSDSWKEALD 120
                ++  + G++   +   E+  
Sbjct: 63  ALTGKSIELYVGDICDFEFLAESFK 87

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 339

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 43.9 bits (102), Expect = 1e-05
 Identities = 25/190 (13%), Positives = 45/190 (23%), Gaps = 37/190 (19%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTVASLSRSG-----------RSSLRDSWANNVIWHQ 106
             L+ G  G  GS++    L +G  V  L R                  +     +  H 
Sbjct: 3   IALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHY 62

Query: 107 GNLLSSDSWKEALDGVTAVISCVGGFGSNSYMYKIN-----------GTANINAIRAASE 155
            +L  + S +  +D +           S+  +                   + A+R+ + 
Sbjct: 63  ADLTDASSLRRWIDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTI 122

Query: 156 KGVKRFVYISAADFGVANYLLQGYYE------------GKRAAETELLT---RYPYGGVI 200
              +   Y  A    +         E             K AA    +     Y      
Sbjct: 123 DSGRTVKYYQAGSSEMFGSTPPPQSETTPFHPRSPYAASKCAAHWYTVNYREAYGLFACN 182

Query: 201 LRPGFIYGTR 210
                    R
Sbjct: 183 GILFNHESPR 192

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

 Score = 43.5 bits (100), Expect = 1e-05
 Identities = 14/60 (23%), Positives = 24/60 (40%), Gaps = 4/60 (6%)

Query: 60  LVLGGNGFVGSHICREALDRGLT----VASLSRSGRSSLRDSWANNVIWHQGNLLSSDSW 115
           +V GG GF+GS+I +   D+G+T    V +L    +              + + L     
Sbjct: 3   IVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLNIADYMDKEDFLIQIMA 62

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} Length = 383

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

 Score = 38.2 bits (87), Expect = 7e-04
 Identities = 16/60 (26%), Positives = 24/60 (40%), Gaps = 1/60 (1%)

Query: 58  KLLVLGGNGFVGSHICREAL-DRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWK 116
           ++LV GG G++GSH  R  L D   +V  +     +  +             L  SD  K
Sbjct: 4   RVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPK 63

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	286
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	100.0
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	100.0
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	100.0
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	100.0
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	100.0
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	100.0
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	100.0
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	100.0
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	99.98
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	99.98
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	99.97
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	99.97
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	99.97
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	99.97
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.97
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.97
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	99.97
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.96
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	99.96
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	99.96
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.95
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	99.95
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	99.95
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	99.94
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	99.94
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	99.94
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	99.93
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	99.91
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	99.9
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	99.9
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	99.89
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	99.88
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	99.88
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	99.87
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	99.87
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	99.87
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	99.86
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	99.86
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	99.86
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	99.86
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	99.86
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	99.86
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	99.85
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	99.85
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	99.85
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	99.85
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	99.85
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	99.85
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	99.85
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	99.85
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	99.85
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	99.85
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	99.85
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	99.84
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	99.84
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	99.83
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	99.83
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	99.83
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	99.83
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	99.83
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	99.83
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	99.83
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	99.83
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	99.82
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	99.82
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	99.82
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	99.82
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	99.82
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	99.81
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	99.81
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	99.81
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	99.81
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	99.8
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	99.79
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	99.79
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	99.78
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	99.78
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	99.78
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	99.78
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	99.76
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	99.76
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	99.75
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	99.75
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	99.73
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	99.72
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	99.72
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	99.72
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	99.71
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	99.68
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	99.65
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	99.65
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	99.64
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	99.64
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	99.59
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	99.57
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	99.47
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	99.17
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	98.75
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	98.44
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	98.37
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	98.34
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	98.27
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	98.18
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	98.18
d1mb4a1	147	Aspartate beta-semialdehyde dehydrogenase {Vibrio	98.04
d2hjsa1	144	Usg-1 protein homolog PA3116 {Pseudomonas aerugino	98.04
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	98.04
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	98.01
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	98.01
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	97.92
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	97.91
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	97.9
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	97.89
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	97.85
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	97.85
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	97.84
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	97.82
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	97.76
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	97.75
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	97.7
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	97.69
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	97.68
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	97.65
d2g17a1	179	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	97.63
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	97.61
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	97.57
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	97.56
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	97.56
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	97.55
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	97.54
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	97.54
d1vkna1	176	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	97.53
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	97.52
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	97.52
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	97.51
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	97.51
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	97.5
d2gz1a1	154	Aspartate beta-semialdehyde dehydrogenase {Strepto	97.45
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	97.42
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	97.41
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	97.39
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	97.39
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	97.38
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	97.36
d2csua1	129	Acetate-CoA ligase alpha chain, AcdA, N-terminal d	97.32
d2cvoa1	183	Putative semialdehyde dehydrogenase {Rice (Oryza s	97.32
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	97.28
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	97.26
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	97.22
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	97.2
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	97.18
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	97.18
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	97.15
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	97.11
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	97.06
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	97.06
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	97.05
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	97.03
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	97.01
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	97.0
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	96.95
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	96.93
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	96.88
d1y81a1	116	Hypothetical protein PF0725 {Pyrococcus furiosus [	96.84
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	96.83
d2d59a1	139	Hypothetical protein PH1109 {Pyrococcus horikoshii	96.73
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	96.7
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	96.66
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	96.65
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	96.63
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	96.6
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	96.58
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	96.52
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	96.38
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	96.31
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	96.31
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	96.26
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	96.19
d3etja2	78	N5-carboxyaminoimidazole ribonucleotide synthetase	96.17
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	96.09
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	96.04
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	96.03
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	96.01
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	95.99
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	95.97
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	95.96
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	95.94
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	95.92
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	95.9
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	95.88
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	95.82
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	95.8
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.7
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.7
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	95.7
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	95.69
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	95.69
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	95.67
d1b7go1	178	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	95.67
d2dt5a2	126	Transcriptional repressor Rex, C-terminal domain {	95.66
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	95.65
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	95.61
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	95.6
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	95.6
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	95.59
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	95.58
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	95.55
d1a9xa4	121	Carbamoyl phosphate synthetase (CPS), large subuni	95.5
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	95.46
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	95.44
d1f06a1	170	Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb	95.4
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	95.35
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	95.33
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	95.3
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	95.22
d2czca2	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	95.2
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.19
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	95.16
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	95.1
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	95.08
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	95.06
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	95.05
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	95.04
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	95.03
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	95.02
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	94.86
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	94.85
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	94.8
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	94.76
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	94.58
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	94.57
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	94.56
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	94.47
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	94.36
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	94.26
d1nvmb1	157	Acetaldehyde dehydrogenase (acylating) {Pseudomona	94.23
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	93.89
d1p9oa_	290	Phosphopantothenoylcysteine synthetase {Human (Hom	93.83
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	93.74
d2gv8a1	335	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	93.71
d1obba1	171	Alpha-glucosidase AglA {Thermotoga maritima [TaxId	93.7
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	93.7
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	93.69
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	93.43
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	93.42
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	93.42
d1iuka_	136	Hypothetical protein TT1466 {Thermus thermophilus	93.35
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	93.32
d2gv8a2	107	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	93.31
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	93.21
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	93.05
d1j5pa4	132	Hypothetical protein TM1643 {Thermotoga maritima [	93.03
d2blna2	203	Polymyxin resistance protein ArnA, N-terminal doma	92.99
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	92.86
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	92.71
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	92.68
d2vapa1	209	Cell-division protein FtsZ {Archaeon Methanococcus	92.52
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	92.33
d1d7ya1	183	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	92.28
d1s6ya1	169	6-phospho-beta-glucosidase {Bacillus stearothermop	92.2
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	92.12
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	92.07
d1i8ta1	298	UDP-galactopyranose mutase, N-terminal domain {Esc	91.89
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	91.89
d1cf2o1	171	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	91.83
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	91.54
d1w5fa1	194	Cell-division protein FtsZ {Thermotoga maritima [T	91.51
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	91.42
d1nhpa1	198	NADH peroxidase {Enterococcus faecalis [TaxId: 135	91.42
d3c96a1	288	Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId:	91.21
d1tlta1	164	Virulence factor MviM {Escherichia coli [TaxId: 56	91.2
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	91.19
d1feca2	117	Trypanothione reductase {Crithidia fasciculata [Ta	91.06
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	91.0
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	90.95
d1np3a2	182	Class I ketol-acid reductoisomerase (KARI) {Pseudo	90.66
d1xhca1	167	NADH oxidase /nitrite reductase {Pyrococcus furios	90.63
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	90.62
d1fmta2	206	Methionyl-tRNAfmet formyltransferase {Escherichia	90.44
d1kifa1	246	D-aminoacid oxidase, N-terminal domain {Pig (Sus s	90.42
d1w4xa1	298	Phenylacetone monooxygenase {Thermobifida fusca [T	90.28
d1b5qa1	347	Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}	90.21
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	89.86
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	89.8
d1gtea3	153	Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su	89.58
d1m6ia2	137	Apoptosis-inducing factor (AIF) {Human (Homo sapie	89.44
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	89.37
d1u8xx1	167	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	89.19
d1ydwa1	184	Probable oxidoreductase At4g09670 {Thale cress (Ar	88.49
d2g82a1	168	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	88.45
d1ofua1	198	Cell-division protein FtsZ {Pseudomonas aeruginosa	88.36
d1gsoa2	105	Glycinamide ribonucleotide synthetase (GAR-syn), N	88.26
d1xeaa1	167	Putative oxidoreductase VCA1048 {Vibrio cholerae [	88.19
d2v5za1	383	Monoamine oxidase B {Human (Homo sapiens) [TaxId:	87.84
d1k3ta1	190	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	87.71
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	87.53
d1n4wa1	367	Cholesterol oxidase of GMC family {Streptomyces sp	87.32
d1yova1	529	Amyloid beta precursor protein-binding protein 1,	87.23
d1rq2a1	198	Cell-division protein FtsZ {Mycobacterium tubercul	87.07
d1gtma1	239	Glutamate dehydrogenase {Archaeon Pyrococcus furio	85.86
d1hdgo1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	85.7
d1wg8a2	182	TM0872, methyltransferase domain {Thermus thermoph	85.62
d1lc0a1	172	Biliverdin reductase {Rat (Rattus norvegicus) [Tax	85.34
d1m6ya2	192	TM0872, methyltransferase domain {Thermotoga marit	85.15
d1gado1	166	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	84.74
d1qkia1	203	Glucose 6-phosphate dehydrogenase, N-terminal doma	84.71
d1b26a1	234	Glutamate dehydrogenase {Thermotoga maritima [TaxI	84.5
d2bw0a2	203	10-formyltetrahydrofolate dehydrogenase domain 1 {	83.82
d1cjca2	230	Adrenodoxin reductase of mitochondrial p450 system	83.52
d2bisa1	437	Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI	83.51
d1vjta1	193	Putative alpha-glucosidase TM0752 {Thermotoga mari	83.43
d1pn0a1	360	Phenol hydroxylase {Soil-living yeast (Trichosporo	83.22
d1y0pa2	308	Flavocytochrome c3 (respiratory fumarate reductase	83.17
d3coxa1	370	Cholesterol oxidase of GMC family {Brevibacterium	83.1
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	82.79
d1cp2a_	269	Nitrogenase iron protein {Clostridium pasteurianum	82.45
d2gqfa1	253	Hypothetical protein HI0933 {Haemophilus influenza	82.44
d1vkza2	90	Glycinamide ribonucleotide synthetase (GAR-syn), N	82.42
d2f5va1	379	Pyranose 2-oxidase {White-rot fungus (Peniophora s	82.07
d1rp0a1	278	Thiazole biosynthetic enzyme Thi4 {Thale cress(Ara	81.54
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	80.94
d1gesa1	217	Glutathione reductase {Escherichia coli [TaxId: 56	80.64
d1f0ka_	351	Peptidoglycan biosynthesis glycosyltransferase Mur	80.53

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=9.4e-35  Score=252.47  Aligned_cols=221  Identities=16%  Similarity=0.097  Sum_probs=167.8

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcc----------cccccCCceeEEeccCCCHhHHHHHhcCC--CE
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSS----------LRDSWANNVIWHQGNLLSSDSWKEALDGV--TA  124 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~----------~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~--d~  124 (286)
                      |+|||||||||||++|+++|+++|++|++++|.....          ......++++++++|++|.+.++++++++  |+
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~   81 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPDE   81 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCSE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhccCCCE
Confidence            6899999999999999999999999999999965321          01122468999999999999999999865  99


Q ss_pred             EEEccccCC------CcchhhhhhhHHHHHHHHHHHHcCCC---EEEEEecC-CcCCCC----------ccccchHHHHH
Q 023205          125 VISCVGGFG------SNSYMYKINGTANINAIRAASEKGVK---RFVYISAA-DFGVAN----------YLLQGYYEGKR  184 (286)
Q Consensus       125 vi~~a~~~~------~~~~~~~~~~~~~~~l~~~a~~~~v~---~~v~~Ss~-~~~~~~----------~~~~~y~~sK~  184 (286)
                      |||+|+...      ++...+++|+.|+.|++++|++.+++   +|||+||+ +||.+.          .|.+.|+.+|.
T Consensus        82 v~h~aa~~~~~~~~~~~~~~~~~Nv~gt~nllea~~~~~~~~~~r~i~~SS~~vYG~~~~~~~~E~~~~~P~~~Y~~sK~  161 (357)
T d1db3a_          82 VYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKL  161 (357)
T ss_dssp             EEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCTTSCCCCCSHHHHHHH
T ss_pred             EEEeecccccchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEEchhhhCCCCCCCcCCCCCCCCCChHHHHHH
Confidence            999998753      33456799999999999999987654   79999994 565432          25678999999


Q ss_pred             HHHHHHHH---hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCC--CCccCCCccHHHHHHHH
Q 023205          185 AAETELLT---RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLV--GPLFTPPVNVTVVAKVA  259 (286)
Q Consensus       185 ~~E~~~~~---~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~i~v~Dva~~~  259 (286)
                      .+|++++.   ..+++++++||+.+|||.......     ...+...+.............  |+..+++++++|+|+++
T Consensus       162 ~~E~~~~~~~~~~~l~~~ilR~~~vyGp~~~~~~~-----~~~i~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~D~~~a~  236 (357)
T d1db3a_         162 YAYWITVNYRESYGMYACNGILFNHESPRRGETFV-----TRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQ  236 (357)
T ss_dssp             HHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSH-----HHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCEEEEEeccccCCCCCcCCC-----chHHHHHHHHHHhCCCceEEECCCCeeecceeechHHHHH
Confidence            99998865   568999999999999997533211     112333444444433333333  44578999999999999


Q ss_pred             HHHhcCCCCCCCeeEeccccccccc
Q 023205          260 VRAATDPVFPPGIVDVHGILRYSQK  284 (286)
Q Consensus       260 ~~~l~~~~~~~~~~~l~~~~~~s~~  284 (286)
                      +.+++.+.  ++.||+++++.+|+.
T Consensus       237 ~~~~~~~~--~~~yni~sg~~~s~~  259 (357)
T d1db3a_         237 WMMLQQEQ--PEDFVIATGVQYSVR  259 (357)
T ss_dssp             HHTTSSSS--CCCEEECCCCCEEHH
T ss_pred             HHHHhCCC--CCeEEECCCCceehH
Confidence            99988753  789999999888754

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-32  Score=221.10  Aligned_cols=197  Identities=17%  Similarity=0.136  Sum_probs=160.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccccCCCc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFGSN  135 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~~~~~  135 (286)
                      |+||+||||||++|++++++|+++|++|++++|++++. +.....+++++.+|+.|.+++.++++++|+|||++|...+ 
T Consensus         3 ~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~-~~~~~~~~~~~~gD~~d~~~l~~al~~~d~vi~~~g~~~~-   80 (205)
T d1hdoa_           3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRL-PSEGPRPAHVVVGDVLQAADVDKTVAGQDAVIVLLGTRND-   80 (205)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGS-CSSSCCCSEEEESCTTSHHHHHHHHTTCSEEEECCCCTTC-
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhc-ccccccccccccccccchhhHHHHhcCCCEEEEEeccCCc-
Confidence            67999999999999999999999999999999997763 3334578999999999999999999999999999987533 


Q ss_pred             chhhhhhhHHHHHHHHHHHHcCCCEEEEEecCC-cCCCC---ccccchHHHHHHHHHHHHHhCCCcEEEEeeCeeecCCC
Q 023205          136 SYMYKINGTANINAIRAASEKGVKRFVYISAAD-FGVAN---YLLQGYYEGKRAAETELLTRYPYGGVILRPGFIYGTRT  211 (286)
Q Consensus       136 ~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~~-~~~~~---~~~~~y~~sK~~~E~~~~~~~g~~~~ilRp~~v~g~~~  211 (286)
                      .....++..++.++++++++++++|||++||.. ++...   .....|...|..+|+++++ .|++|+++||+.+++...
T Consensus        81 ~~~~~~~~~~~~~l~~aa~~~~v~r~i~~ss~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~-~~~~~tiirp~~~~~~~~  159 (205)
T d1hdoa_          81 LSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKVPPRLQAVTDDHIRMHKVLRE-SGLKYVAVMPPHIGDQPL  159 (205)
T ss_dssp             CSCCCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCTTCSCGGGHHHHHHHHHHHHHHHH-TCSEEEEECCSEEECCCC
T ss_pred             hhhhhhhHHHHHHHHHHHHhcCCCeEEEEeeeeccCCCccccccccccchHHHHHHHHHHh-cCCceEEEecceecCCCC
Confidence            233467788999999999999999999999853 33222   2234688999999997765 899999999999987544


Q ss_pred             CCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcCCCCCCCeeEecc
Q 023205          212 VGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDPVFPPGIVDVHG  277 (286)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~l~~  277 (286)
                      .+..                      .+...+.....+|+++|+|++++.+++++++.|+.+.+.+
T Consensus       160 ~~~~----------------------~~~~~~~~~~~~i~~~DvA~~~~~~l~~~~~~g~~~~~s~  203 (205)
T d1hdoa_         160 TGAY----------------------TVTLDGRGPSRVISKHDLGHFMLRCLTTDEYDGHSTYPSH  203 (205)
T ss_dssp             CSCC----------------------EEESSSCSSCSEEEHHHHHHHHHHTTSCSTTTTCEEEEEC
T ss_pred             cccE----------------------EEeeCCCCCCCcCCHHHHHHHHHHHhCCCCCCCEEEecCC
Confidence            3221                      1223345566789999999999999999998898888765

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3e-34  Score=244.86  Aligned_cols=214  Identities=19%  Similarity=0.155  Sum_probs=164.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCccccc----ccCCceeEEeccCCCHhHHHHHhcCCCEEEEcccc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRD----SWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG  131 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~----~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~  131 (286)
                      +|+||||||+||||++++++|+++|++|++++|........    .....+++...|+     ++.++.++|+|||+|+.
T Consensus         1 kKKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~d~~~~~~-----~~~~~~~~d~VihlAa~   75 (312)
T d2b69a1           1 RKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDV-----VEPLYIEVDQIYHLASP   75 (312)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCT-----TSCCCCCCSEEEECCSC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHHHHhcCCCceEEEehHH-----HHHHHcCCCEEEECccc
Confidence            47899999999999999999999999999998754332211    1223455665555     44566789999999986


Q ss_pred             CC------CcchhhhhhhHHHHHHHHHHHHcCCCEEEEEec-CCcCCC---------------CccccchHHHHHHHHHH
Q 023205          132 FG------SNSYMYKINGTANINAIRAASEKGVKRFVYISA-ADFGVA---------------NYLLQGYYEGKRAAETE  189 (286)
Q Consensus       132 ~~------~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss-~~~~~~---------------~~~~~~y~~sK~~~E~~  189 (286)
                      ..      ++...+++|+.++.+++++|++.++ ++||+|| .+|+..               ..|.+.|+.+|..+|.+
T Consensus        76 ~~~~~~~~~~~~~~~~Nv~g~~~ll~~~~~~~~-k~I~~SS~~vy~~~~~~~~~e~~~~~~~~~~p~~~Y~~sK~~~E~~  154 (312)
T d2b69a1          76 ASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA-RLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETM  154 (312)
T ss_dssp             CSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTC-EEEEEEEGGGGBSCSSSSBCTTCCCBCCSSSTTHHHHHHHHHHHHH
T ss_pred             CCchhHHhCHHHHHHHHHHHHHHHHHHHHHcCC-cEEEEEChheecCCCCCCCCccccCCCCCCCCccHHHHHHHHHHHH
Confidence            53      3445679999999999999999987 7999998 355432               13567899999999998


Q ss_pred             HHH---hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCC--CccCCCccHHHHHHHHHHHhc
Q 023205          190 LLT---RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVG--PLFTPPVNVTVVAKVAVRAAT  264 (286)
Q Consensus       190 ~~~---~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--~~~~~~i~v~Dva~~~~~~l~  264 (286)
                      ++.   ..|++++++||+.+|||+.....       +.++..+........++++.|  ...++|+|++|++++++.+++
T Consensus       155 ~~~~~~~~~~~~~~lR~~~vyGp~~~~~~-------~~~i~~~i~~~~~g~~i~i~~~g~~~r~~i~v~D~~~~~~~~~~  227 (312)
T d2b69a1         155 CYAYMKQEGVEVRVARIFNTFGPRMHMND-------GRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMN  227 (312)
T ss_dssp             HHHHHHHHCCCEEEEEECCEECTTCCTTC-------CCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHHHHHHT
T ss_pred             HHHHHHHhCCcEEEEEeeeEECCCCCCCC-------ccHHHHHHHHHHcCCCeEEeCCCCeeEccEEHHHHHHHHHHHHh
Confidence            864   56999999999999999765331       234555555555556666554  447899999999999999987


Q ss_pred             CCCCCCCeeEeccccccccc
Q 023205          265 DPVFPPGIVDVHGILRYSQK  284 (286)
Q Consensus       265 ~~~~~~~~~~l~~~~~~s~~  284 (286)
                      ...  +++||+++++.++++
T Consensus       228 ~~~--~~~~n~~~~~~~~~~  245 (312)
T d2b69a1         228 SNV--SSPVNLGNPEEHTIL  245 (312)
T ss_dssp             SSC--CSCEEESCCCEEEHH
T ss_pred             hcc--CCceEecCCcccchh
Confidence            654  779999999888764

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=100.00  E-value=2.7e-33  Score=239.87  Aligned_cols=218  Identities=19%  Similarity=0.198  Sum_probs=174.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCeE------EEEecCCCc-----ccccccCCceeEEeccCCCHhHHHHHhcCCCEE
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGLTV------ASLSRSGRS-----SLRDSWANNVIWHQGNLLSSDSWKEALDGVTAV  125 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~~V------~~l~R~~~~-----~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~v  125 (286)
                      |+|||||||||||++|++.|+++|++|      +.+++....     ........+++++.+|..+..........+|.|
T Consensus         1 MkIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~v   80 (322)
T d1r6da_           1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLARELRGVDAI   80 (322)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHTTTCCEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHhHhhhhhcCCCeEEEEeccccchhhhccccccceE
Confidence            589999999999999999999999754      444432211     111223468999999999999999999999999


Q ss_pred             EEccccCC------CcchhhhhhhHHHHHHHHHHHHcCCCEEEEEecC-CcCCC----------CccccchHHHHHHHHH
Q 023205          126 ISCVGGFG------SNSYMYKINGTANINAIRAASEKGVKRFVYISAA-DFGVA----------NYLLQGYYEGKRAAET  188 (286)
Q Consensus       126 i~~a~~~~------~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~-~~~~~----------~~~~~~y~~sK~~~E~  188 (286)
                      +|+|+...      +....++.|+.++.+++++|++.++++|||+||. +|+..          ..|.+.|+.+|..+|.
T Consensus        81 i~~a~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~I~~Ss~~~yg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~  160 (322)
T d1r6da_          81 VHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSIDSGSWTESSPLEPNSPYAASKAGSDL  160 (322)
T ss_dssp             EECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGCCCSSSCBCTTSCCCCCSHHHHHHHHHHH
T ss_pred             EeecccccccccccchHHHhhhhHHHHHHHHHHHHHcCCceEEEeecceeecCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Confidence            99997753      3456778999999999999999999999999994 45432          2356789999999999


Q ss_pred             HHHH---hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCC--CccCCCccHHHHHHHHHHHh
Q 023205          189 ELLT---RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVG--PLFTPPVNVTVVAKVAVRAA  263 (286)
Q Consensus       189 ~~~~---~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--~~~~~~i~v~Dva~~~~~~l  263 (286)
                      ++..   ..+++++++||+.+|||.....         .++..+.......+++++.|  +..++|+|++|+|++++.++
T Consensus       161 ~~~~~~~~~~~~~~~lR~~~vyGp~~~~~---------~~i~~~i~~~~~~~~i~v~~~g~~~r~~i~v~D~a~ai~~~~  231 (322)
T d1r6da_         161 VARAYHRTYGLDVRITRCCNNYGPYQHPE---------KLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVL  231 (322)
T ss_dssp             HHHHHHHHHCCCEEEEEECEEECTTCCTT---------SHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHhCCCEEEEEeeeEECcCCCcC---------cHHHHHHHHHHcCCCcEEecCCCeEEccEEHHHHHHHHHHHH
Confidence            8864   5689999999999999976433         24555666555666777654  45789999999999999999


Q ss_pred             cCCCCCCCeeEeccccccccc
Q 023205          264 TDPVFPPGIVDVHGILRYSQK  284 (286)
Q Consensus       264 ~~~~~~~~~~~l~~~~~~s~~  284 (286)
                      +++.. +++||+++++.++..
T Consensus       232 ~~~~~-~~~~ni~~~~~~s~~  251 (322)
T d1r6da_         232 AGGRA-GEIYHIGGGLELTNR  251 (322)
T ss_dssp             HHCCT-TCEEEECCCCEEEHH
T ss_pred             hCCCC-CCeeEEeecccchhH
Confidence            88765 789999999888754

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=100.00  E-value=3.6e-33  Score=242.69  Aligned_cols=217  Identities=17%  Similarity=0.153  Sum_probs=168.9

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCC-cc----cc-cccCCceeEEeccCCCHhHHHHHhc--CCCEEEEc
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGR-SS----LR-DSWANNVIWHQGNLLSSDSWKEALD--GVTAVISC  128 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~-~~----~~-~~~~~~~~~i~~Dl~d~~~~~~~~~--~~d~vi~~  128 (286)
                      |+|||||||||||++|+++|++.|++|++..++.. ..    .. ....++++++++|++|++.+..+++  .+|+|||+
T Consensus         1 MkILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~Vihl   80 (361)
T d1kewa_           1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAVMHL   80 (361)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccccHHHHHhhhhcCCcEEEEccCCCHHHHHHHHHhCCCCEEEEC
Confidence            58999999999999999999999997655444322 11    11 1123589999999999999999887  48999999


Q ss_pred             cccCC------CcchhhhhhhHHHHHHHHHHHHcC---------CCEEEEEecC-CcCCC--------------------
Q 023205          129 VGGFG------SNSYMYKINGTANINAIRAASEKG---------VKRFVYISAA-DFGVA--------------------  172 (286)
Q Consensus       129 a~~~~------~~~~~~~~~~~~~~~l~~~a~~~~---------v~~~v~~Ss~-~~~~~--------------------  172 (286)
                      |+...      ++...+++|+.++.+++++|++.+         +++||++||. +||..                    
T Consensus        81 Aa~~~~~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~e~~~  160 (361)
T d1kewa_          81 AAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTA  160 (361)
T ss_dssp             CSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCTTSC
T ss_pred             ccccchhhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCccccccCCCCcccCCC
Confidence            99764      345678999999999999998754         4589999994 45422                    


Q ss_pred             CccccchHHHHHHHHHHHHH---hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCC--CccC
Q 023205          173 NYLLQGYYEGKRAAETELLT---RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVG--PLFT  247 (286)
Q Consensus       173 ~~~~~~y~~sK~~~E~~~~~---~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--~~~~  247 (286)
                      ..|.+.|+.+|..+|.++..   ..+++++++||+.+|||.....         .++..+........++.+.|  +..+
T Consensus       161 ~~p~s~Yg~sK~~~E~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~---------~~i~~~i~~~~~g~~~~v~g~g~~~r  231 (361)
T d1kewa_         161 YAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPE---------KLIPLVILNALEGKPLPIYGKGDQIR  231 (361)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTT---------SHHHHHHHHHHHTCCEEEETTSCCEE
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEecCceECcCCCcC---------cHHHHHHHHHHcCCCcEEeCCCCeEE
Confidence            12456799999999998875   5699999999999999976432         24455555555555665544  4578


Q ss_pred             CCccHHHHHHHHHHHhcCCCCCCCeeEecccccccc
Q 023205          248 PPVNVTVVAKVAVRAATDPVFPPGIVDVHGILRYSQ  283 (286)
Q Consensus       248 ~~i~v~Dva~~~~~~l~~~~~~~~~~~l~~~~~~s~  283 (286)
                      +|+|++|+|+++..+++++.. +++|||++++.++.
T Consensus       232 ~~i~v~D~a~ai~~~~~~~~~-~~~~Ni~s~~~~s~  266 (361)
T d1kewa_         232 DWLYVEDHARALHMVVTEGKA-GETYNIGGHNEKKN  266 (361)
T ss_dssp             EEEEHHHHHHHHHHHHHHCCT-TCEEEECCCCEEEH
T ss_pred             eCEEHHHHHHHHHHHHhcCCC-CCeEEECCCCCcch
Confidence            999999999999999987765 78999999887764

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=4e-32  Score=236.18  Aligned_cols=226  Identities=19%  Similarity=0.159  Sum_probs=174.6

Q ss_pred             CCCCCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEcccc
Q 023205           52 PPPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG  131 (286)
Q Consensus        52 ~~~~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~  131 (286)
                      -+.+.|+|||||||||||++|+++|+++|++|++++|....... ......++..+|+.+.+.+.++++++|+|||+|+.
T Consensus        11 ~~~~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~d~Vih~a~~   89 (363)
T d2c5aa1          11 WPSENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMT-EDMFCDEFHLVDLRVMENCLKVTEGVDHVFNLAAD   89 (363)
T ss_dssp             CTTSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSC-GGGTCSEEEECCTTSHHHHHHHHTTCSEEEECCCC
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccchh-hhcccCcEEEeechhHHHHHHHhhcCCeEeecccc
Confidence            34457899999999999999999999999999999987654322 22346788999999999999999999999999976


Q ss_pred             CC-------CcchhhhhhhHHHHHHHHHHHHcCCCEEEEEecC-CcCCC-----------------CccccchHHHHHHH
Q 023205          132 FG-------SNSYMYKINGTANINAIRAASEKGVKRFVYISAA-DFGVA-----------------NYLLQGYYEGKRAA  186 (286)
Q Consensus       132 ~~-------~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~-~~~~~-----------------~~~~~~y~~sK~~~  186 (286)
                      ..       .+......|+.++.+++++|++.++++||++||. .|+..                 ..|.+.|+.+|..+
T Consensus        90 ~~~~~~~~~~~~~~~~~n~~gt~~ll~~~~~~~vk~~i~~SS~~~~~~~~~~~~~~~~~~~~e~~~~~p~~~Yg~sK~~~  169 (363)
T d2c5aa1          90 MGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKLAT  169 (363)
T ss_dssp             CCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCSSHHHHHHHHH
T ss_pred             cccccccccccccccccccchhhHHHHhHHhhCccccccccccccccccccccccccccccccCCcCCCCCHHHHHHHHH
Confidence            53       2345668899999999999999999999999994 33321                 13467899999999


Q ss_pred             HHHHHH---hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCC--CCccCCCccHHHHHHHHHH
Q 023205          187 ETELLT---RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLV--GPLFTPPVNVTVVAKVAVR  261 (286)
Q Consensus       187 E~~~~~---~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~i~v~Dva~~~~~  261 (286)
                      |++++.   ..|++++++||+.+||+.........    ....................  |...++|+|++|+++++..
T Consensus       170 E~~~~~~~~~~gl~~~ilR~~~vyG~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~~~~~~~  245 (363)
T d2c5aa1         170 EELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGRE----KAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLR  245 (363)
T ss_dssp             HHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCC----CHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCEEEEEeeeEeccCCccccccc----ccccccccccccccccccccCCCCeEEEEeehhHHHHHHHH
Confidence            998874   56999999999999999765432221    11122222333333333333  4457899999999999999


Q ss_pred             HhcCCCCCCCeeEeccccccccc
Q 023205          262 AATDPVFPPGIVDVHGILRYSQK  284 (286)
Q Consensus       262 ~l~~~~~~~~~~~l~~~~~~s~~  284 (286)
                      +++.+.  +++||+++++.+++.
T Consensus       246 ~~~~~~--~~~~ni~~~~~~s~~  266 (363)
T d2c5aa1         246 LTKSDF--REPVNIGSDEMVSMN  266 (363)
T ss_dssp             HHHSSC--CSCEEECCCCCEEHH
T ss_pred             HHhCCC--CCeEEEecCCcccHH
Confidence            987653  789999999988764

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=100.00  E-value=2.9e-32  Score=235.60  Aligned_cols=218  Identities=14%  Similarity=0.083  Sum_probs=169.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCc------ccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEcc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRS------SLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCV  129 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~------~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a  129 (286)
                      ||+|||||||||||++|+++|+++|++|.++.++...      .......++++++.+|+.|.+.+..+++++|.|+|+|
T Consensus         2 ~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~Di~d~~~~~~~~~~~~~v~~~a   81 (346)
T d1oc2a_           2 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAAKADAIVHYA   81 (346)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHTTCSEEEECC
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHHHHhhcCCeEEEEccCCCHHHHHHHHhhhhhhhhhh
Confidence            7899999999999999999999999887766665311      1122335689999999999999999999999999999


Q ss_pred             ccCC------CcchhhhhhhHHHHHHHHHHHHcCCCEEEEEec-CCcCCC----------------------CccccchH
Q 023205          130 GGFG------SNSYMYKINGTANINAIRAASEKGVKRFVYISA-ADFGVA----------------------NYLLQGYY  180 (286)
Q Consensus       130 ~~~~------~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss-~~~~~~----------------------~~~~~~y~  180 (286)
                      +...      ++...+++|+.++.|+++++...+. ++|++|| ..||..                      ..|.+.|+
T Consensus        82 ~~~~~~~~~~~~~~~~~~N~~g~~nll~~~~~~~~-k~i~~ss~~vyg~~~~~~~~~~~~~~~~~~~~e~~~~~p~s~Y~  160 (346)
T d1oc2a_          82 AESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDI-RFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYS  160 (346)
T ss_dssp             SCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCCCCCSHHH
T ss_pred             hcccccchhhCcccceeeehHhHHhhhhhhccccc-cccccccceEecccCccccccccccCcccccccCCCCCCCCHHH
Confidence            8753      4457789999999999999999986 5666666 455431                      12457799


Q ss_pred             HHHHHHHHHHHH---hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCC--CCccCCCccHHHH
Q 023205          181 EGKRAAETELLT---RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLV--GPLFTPPVNVTVV  255 (286)
Q Consensus       181 ~sK~~~E~~~~~---~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~i~v~Dv  255 (286)
                      .+|..+|++++.   ..+++++++||+.+|||.....         ..+..+........++++.  |+..+++++++|+
T Consensus       161 ~sK~~~E~~~~~~~~~~~i~~~ilR~~~vyGp~~~~~---------~~~~~~i~~~~~~~~~~i~~~g~~~r~~i~v~D~  231 (346)
T d1oc2a_         161 STKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIE---------KFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDH  231 (346)
T ss_dssp             HHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTT---------SHHHHHHHHHHHTCCCEEETTSCCEEECEEHHHH
T ss_pred             HHHHHHHHHHHHHHHHcCCCEEEEeecceeCCCCCcc---------chhHHHHHHHHcCCceeEeCCCCccccccchhhH
Confidence            999999998864   5689999999999999875433         1233333333333444444  4558899999999


Q ss_pred             HHHHHHHhcCCCCCCCeeEeccccccccc
Q 023205          256 AKVAVRAATDPVFPPGIVDVHGILRYSQK  284 (286)
Q Consensus       256 a~~~~~~l~~~~~~~~~~~l~~~~~~s~~  284 (286)
                      |++++.+++.+.. ++.|++.+++..++.
T Consensus       232 a~a~~~~~~~~~~-~~~~~~~~~~~~~~~  259 (346)
T d1oc2a_         232 STGVWAILTKGRM-GETYLIGADGEKNNK  259 (346)
T ss_dssp             HHHHHHHHHHCCT-TCEEEECCSCEEEHH
T ss_pred             HHHHHHHHhhccc-Cccccccccccccch
Confidence            9999998887765 789999998887764

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=2.6e-31  Score=228.93  Aligned_cols=228  Identities=23%  Similarity=0.242  Sum_probs=172.4

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCccc------ccccCCceeEEeccCCCHhHHHHHhc--CCCEEEEc
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSL------RDSWANNVIWHQGNLLSSDSWKEALD--GVTAVISC  128 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~------~~~~~~~~~~i~~Dl~d~~~~~~~~~--~~d~vi~~  128 (286)
                      |||||||||||||++|++.|+++|++|++++|-.....      ......+++++++|++|.+.+.++++  ++|+|||+
T Consensus         1 MKiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~ViHl   80 (338)
T d1udca_           1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIHF   80 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEEC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhhcCCCCEEEEeecCCHHHHHHHHhccCCCEEEEC
Confidence            57999999999999999999999999999987433211      12234689999999999999999998  79999999


Q ss_pred             cccCC------CcchhhhhhhHHHHHHHHHHHHcCCCEEEEEecC-CcCCC-----------CccccchHHHHHHHHHHH
Q 023205          129 VGGFG------SNSYMYKINGTANINAIRAASEKGVKRFVYISAA-DFGVA-----------NYLLQGYYEGKRAAETEL  190 (286)
Q Consensus       129 a~~~~------~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~-~~~~~-----------~~~~~~y~~sK~~~E~~~  190 (286)
                      |+...      ++...+++|+.|+.+++++|++.++++||++||. +|+..           ..|...|+.+|..+|.++
T Consensus        81 Aa~~~~~~~~~~~~~~~~~Nv~gt~nlL~~~~~~~v~~~i~~Ss~~vy~~~~~~~~~e~~~~~~p~~~Y~~sK~~~e~~~  160 (338)
T d1udca_          81 AGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQIL  160 (338)
T ss_dssp             CSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSSHHHHHHHHHHHHH
T ss_pred             CCccchhhHHhCHHHHHHhHHHHHHHHHHHHHHhCCCEEEecCcceEEccccccccccccccCCCcchHHHHHhhhhHHH
Confidence            98653      3346789999999999999999999999999994 34321           135778999999999988


Q ss_pred             HH----hCCCcEEEEeeCeeecCCCCCcccc-CccccCchHHHHHHhccc-CCCCCCC--------CCccCCCccHHHHH
Q 023205          191 LT----RYPYGGVILRPGFIYGTRTVGGMKL-PLGVIGSPMEMVLQHAKP-LSQLPLV--------GPLFTPPVNVTVVA  256 (286)
Q Consensus       191 ~~----~~g~~~~ilRp~~v~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~--------g~~~~~~i~v~Dva  256 (286)
                      .+    ..+++++++|++.+||+........ +......++..+...... ..++.+.        |...++|++++|++
T Consensus       161 ~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~i~g~~~~~~~g~~~rd~i~v~D~~  240 (338)
T d1udca_         161 TDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDLA  240 (338)
T ss_dssp             HHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCSSSTTSSCEECEEEHHHHH
T ss_pred             HHHHhhccCCeEEEEeeccEEeccCCCCCCCCccccHHHHHHHHHHHHhcCCCCEEEeCCCcccCCCCceeeEEEEeehh
Confidence            74    3589999999999999976543211 122223455555444332 2233332        34467899999999


Q ss_pred             HHHHHHhc--CCCCCCCeeEeccccccccc
Q 023205          257 KVAVRAAT--DPVFPPGIVDVHGILRYSQK  284 (286)
Q Consensus       257 ~~~~~~l~--~~~~~~~~~~l~~~~~~s~~  284 (286)
                      +++..+..  .....+++||+++++.+++.
T Consensus       241 ~~~~~~~~~~~~~~~~~i~Ni~~~~~~si~  270 (338)
T d1udca_         241 DGHVVAMEKLANKPGVHIYNLGAGVGNSVL  270 (338)
T ss_dssp             HHHHHHHHHHTTCCEEEEEEESCSSCEEHH
T ss_pred             hhccccccccccccCcceeeecCCCCCcHH
Confidence            88777665  23334679999999887753

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.98  E-value=1.7e-31  Score=230.31  Aligned_cols=225  Identities=18%  Similarity=0.138  Sum_probs=179.2

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCccc----------ccccCCceeEEeccCCCHhHHHHHhcCCCE
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSL----------RDSWANNVIWHQGNLLSSDSWKEALDGVTA  124 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~----------~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~  124 (286)
                      ++|+|||||||||||++|+++|+++|++|++++|......          .....++++++.+|+.|...+.....+.+.
T Consensus        15 ~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~~~   94 (341)
T d1sb8a_          15 QPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGVDY   94 (341)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTCSE
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeeccccccccccccccccc
Confidence            3579999999999999999999999999999998543211          111235799999999999999999999999


Q ss_pred             EEEccccCC------CcchhhhhhhHHHHHHHHHHHHcCCCEEEEEecC-CcCCC----------CccccchHHHHHHHH
Q 023205          125 VISCVGGFG------SNSYMYKINGTANINAIRAASEKGVKRFVYISAA-DFGVA----------NYLLQGYYEGKRAAE  187 (286)
Q Consensus       125 vi~~a~~~~------~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~-~~~~~----------~~~~~~y~~sK~~~E  187 (286)
                      |+|+++...      ++...++.|+.|+.+++++|++.++++|||+||. +||..          ..|.+.|+.+|..+|
T Consensus        95 v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E  174 (341)
T d1sb8a_          95 VLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNE  174 (341)
T ss_dssp             EEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHHHHHHHHH
T ss_pred             cccccccccccccccCccchhheeehhHHHHHHHHHhcCCceEEEcccceeeCCCCCCCccCCCCCCCCCcchHHHHHHH
Confidence            999987643      3356789999999999999999999999999994 55532          235688999999999


Q ss_pred             HHHHH---hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCC--ccCCCccHHHHHHHHHHH
Q 023205          188 TELLT---RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGP--LFTPPVNVTVVAKVAVRA  262 (286)
Q Consensus       188 ~~~~~---~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~--~~~~~i~v~Dva~~~~~~  262 (286)
                      +++..   ..+++++++||+.+||+...+...     ...++..+........++++.|+  ..++|+|++|++.++..+
T Consensus       175 ~~~~~~~~~~~i~~~ilR~~~v~G~~~~~~~~-----~~~~i~~~~~~~~~g~~i~~~g~g~~~r~~i~v~D~~~a~~~~  249 (341)
T d1sb8a_         175 LYADVFSRCYGFSTIGLRYFNVFGRRQDPNGA-----YAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANLLA  249 (341)
T ss_dssp             HHHHHHHHHHCCCCEEEEECCEECTTCCCCST-----TCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCeEEEEeceeeccCcCCCCc-----hhhhHHHHHHHHHcCCceEEcCCCCEEEEEEEEeccchhhhhh
Confidence            98764   568999999999999998754421     13355555555555566766554  478999999999999998


Q ss_pred             hcCCC-CCCCeeEeccccccccc
Q 023205          263 ATDPV-FPPGIVDVHGILRYSQK  284 (286)
Q Consensus       263 l~~~~-~~~~~~~l~~~~~~s~~  284 (286)
                      +..+. ..++.|++++...+++.
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~si~  272 (341)
T d1sb8a_         250 ATAGLDARNQVYNIAVGGRTSLN  272 (341)
T ss_dssp             HTCCGGGCSEEEEESCSCCEEHH
T ss_pred             hhccccccceeeeecccccchHH
Confidence            87653 45779999998877754

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=99.98  E-value=2e-31  Score=229.93  Aligned_cols=226  Identities=16%  Similarity=0.187  Sum_probs=168.9

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCC-CeEEEEecCCCcccccccCCceeEEeccCCCHhHHHH-HhcCCCEEEEccccCC-
Q 023205           57 EKLLVLGGNGFVGSHICREALDRG-LTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKE-ALDGVTAVISCVGGFG-  133 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g-~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~-~~~~~d~vi~~a~~~~-  133 (286)
                      |||||||||||||++++++|+++| ++|+++++...........++++++++|+++.+.+.+ +++++|+|||+|+... 
T Consensus         1 MKILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~~~~~~~~i~~Di~~~~~~~~~~~~~~d~Vih~a~~~~~   80 (342)
T d2blla1           1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIATP   80 (342)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHHHHCSEEEECBCCCCH
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhccCCCeEEEECccCChHHHHHHHHhCCCccccccccccc
Confidence            589999999999999999999999 5899999876554334445789999999988766544 7788999999999764 


Q ss_pred             -----CcchhhhhhhHHHHHHHHHHHHcCCCEEEEEec-CCcCCC-----------------CccccchHHHHHHHHHHH
Q 023205          134 -----SNSYMYKINGTANINAIRAASEKGVKRFVYISA-ADFGVA-----------------NYLLQGYYEGKRAAETEL  190 (286)
Q Consensus       134 -----~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss-~~~~~~-----------------~~~~~~y~~sK~~~E~~~  190 (286)
                           ++...+..|+.++.+++++|.+.+++ ++++|| ..|+..                 ..|...|+.+|..+|+++
T Consensus        81 ~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~~-~~~~ss~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~  159 (342)
T d2blla1          81 IEYTRNPLRVFELDFEENLRIIRYCVKYRKR-IIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVI  159 (342)
T ss_dssp             HHHHHSHHHHHHHHTHHHHHHHHHHHHTTCE-EEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGGHHHHHHHHHHHHH
T ss_pred             cccccCCcccccccccccccccccccccccc-ccccccccccccccccccccccccccccccCCCcchhhhcccchhhhh
Confidence                 23456789999999999999999875 556666 333321                 123467999999999988


Q ss_pred             HH---hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCC--CCccCCCccHHHHHHHHHHHhcC
Q 023205          191 LT---RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLV--GPLFTPPVNVTVVAKVAVRAATD  265 (286)
Q Consensus       191 ~~---~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~i~v~Dva~~~~~~l~~  265 (286)
                      +.   ..|++++++|++.+||+........... .......+........++.+.  |+..++++|++|+|+++..++++
T Consensus       160 ~~~~~~~~~~~~i~r~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~g~~~r~~i~v~D~~~a~~~~~~~  238 (342)
T d2blla1         160 WAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIG-SSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIEN  238 (342)
T ss_dssp             HHHHHHHCCCEEEEEECSEECSSCCCTTCSBSC-BCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHHHHHHHHHHC
T ss_pred             hhhhcccCceeEEeecccccccccccccccccc-ccccchHHHHHHHhCCCccccCCCCeeeeecccccccceeeeehhh
Confidence            75   4689999999999999976543222111 122334444444444555544  45578999999999999999987


Q ss_pred             C--CCCCCeeEeccccc-cccc
Q 023205          266 P--VFPPGIVDVHGILR-YSQK  284 (286)
Q Consensus       266 ~--~~~~~~~~l~~~~~-~s~~  284 (286)
                      +  ...+++||+++++. +|++
T Consensus       239 ~~~~~~g~~~Nig~~~~~~t~~  260 (342)
T d2blla1         239 AGNRCDGEIINIGNPENEASIE  260 (342)
T ss_dssp             GGGTTTTEEEEECCTTSEEEHH
T ss_pred             ccccCCCeEEEEecccchhHHH
Confidence            4  34578999987653 5653

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=2.8e-31  Score=216.85  Aligned_cols=205  Identities=19%  Similarity=0.252  Sum_probs=158.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC--eEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccccCC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGL--TVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFG  133 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~--~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~~~  133 (286)
                      +++|||||||||||++++++|+++|+  +|++++|++.... .....++++..+|+.+.+++.++++++|+|||++|...
T Consensus        14 ~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~-~~~~~~i~~~~~D~~~~~~~~~~~~~~d~vi~~~~~~~   92 (232)
T d2bkaa1          14 NKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFD-EEAYKNVNQEVVDFEKLDDYASAFQGHDVGFCCLGTTR   92 (232)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCC-SGGGGGCEEEECCGGGGGGGGGGGSSCSEEEECCCCCH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhc-ccccceeeeeeecccccccccccccccccccccccccc
Confidence            46899999999999999999999984  8999999876532 23346889999999999999999999999999998753


Q ss_pred             ---CcchhhhhhhHHHHHHHHHHHHcCCCEEEEEecCCcCCCCccccchHHHHHHHHHHHHHhCCC-cEEEEeeCeeecC
Q 023205          134 ---SNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLTRYPY-GGVILRPGFIYGT  209 (286)
Q Consensus       134 ---~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~~~~g~-~~~ilRp~~v~g~  209 (286)
                         +.....++|+.++.+++++|++.++++||++|+.  +....+.+.|+++|..+|+.+.+ .++ +++|+||+.+||+
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~fi~~Ss~--~~~~~~~~~Y~~~K~~~E~~l~~-~~~~~~~IlRP~~i~G~  169 (232)
T d2bkaa1          93 GKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSK--GADKSSNFLYLQVKGEVEAKVEE-LKFDRYSVFRPGVLLCD  169 (232)
T ss_dssp             HHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCT--TCCTTCSSHHHHHHHHHHHHHHT-TCCSEEEEEECCEEECT
T ss_pred             cccchhhhhhhcccccceeeecccccCccccccCCcc--ccccCccchhHHHHHHhhhcccc-ccccceEEecCceeecC
Confidence               2345678999999999999999999999999995  33445567899999999998877 555 5999999999998


Q ss_pred             CCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcCCCCCCCeeEeccc
Q 023205          210 RTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDPVFPPGIVDVHGI  278 (286)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~l~~~  278 (286)
                      .....          ....+.....  ..++ .+.....+|+++|+|+++++++.++.. ++.+.+.+.
T Consensus       170 ~~~~~----------~~~~~~~~~~--~~~~-~~~~~~~~I~~~dvA~a~i~~~~~~~~-~~~~i~~~~  224 (232)
T d2bkaa1         170 RQESR----------PGEWLVRKFF--GSLP-DSWASGHSVPVVTVVRAMLNNVVRPRD-KQMELLENK  224 (232)
T ss_dssp             TGGGS----------HHHHHHHHHH--CSCC-TTGGGGTEEEHHHHHHHHHHHHTSCCC-SSEEEEEHH
T ss_pred             CCcCc----------HHHHHHHHHh--hccC-CcccCCCeEEHHHHHHHHHHHHhcCcc-CCeEEEcHH
Confidence            65422          1222222111  1111 112244579999999999999987765 666766653

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=2e-30  Score=223.87  Aligned_cols=219  Identities=15%  Similarity=0.049  Sum_probs=162.0

Q ss_pred             CeE-EEEcCCChhHHHHHHHHHHCCCeEEEEecCCCccc-----------ccccCCceeEEeccCCCHhHHHHHhcC--C
Q 023205           57 EKL-LVLGGNGFVGSHICREALDRGLTVASLSRSGRSSL-----------RDSWANNVIWHQGNLLSSDSWKEALDG--V  122 (286)
Q Consensus        57 ~~V-lVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~-----------~~~~~~~~~~i~~Dl~d~~~~~~~~~~--~  122 (286)
                      ||| ||||||||||++|+++|+++||+|++++|..+...           ......+++++.+|++|++.+..++.+  +
T Consensus         1 kKI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~   80 (347)
T d1t2aa_           1 RNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKP   80 (347)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHCC
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhhccc
Confidence            468 99999999999999999999999999999764311           111235789999999999999999864  6


Q ss_pred             CEEEEccccCC------CcchhhhhhhHHHHHHHHHHHHcCC---CEEEEEecC-CcCCCC----------ccccchHHH
Q 023205          123 TAVISCVGGFG------SNSYMYKINGTANINAIRAASEKGV---KRFVYISAA-DFGVAN----------YLLQGYYEG  182 (286)
Q Consensus       123 d~vi~~a~~~~------~~~~~~~~~~~~~~~l~~~a~~~~v---~~~v~~Ss~-~~~~~~----------~~~~~y~~s  182 (286)
                      ++++|+++...      +....+++|+.++.+++++|++.++   ++|||+||. +||...          .|.+.|+.+
T Consensus        81 ~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~P~~~Yg~s  160 (347)
T d1t2aa_          81 TEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAA  160 (347)
T ss_dssp             SEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSBCTTSCCCCCSHHHHH
T ss_pred             ceeeeeeeccccchhhccchhhhhhHHHHHHHHHHHHHHcCCCCCcEEEEecchheecCCCCCCCCCCCCCCCCCHHHHH
Confidence            79999987653      3345568999999999999999875   489999984 566432          246789999


Q ss_pred             HHHHHHHHHH---hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCC--CCccCCCccHHHHHH
Q 023205          183 KRAAETELLT---RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLV--GPLFTPPVNVTVVAK  257 (286)
Q Consensus       183 K~~~E~~~~~---~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~i~v~Dva~  257 (286)
                      |..+|++++.   ..+++++++||+.+|||........     ......+........++...  |+..+++++++|+++
T Consensus       161 K~~aE~~~~~~~~~~~~~~~ilr~~~vyGp~~~~~~~~-----~~~~~~i~~~~~~~~~~~~~g~g~~~r~~i~v~D~~~  235 (347)
T d1t2aa_         161 KLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVT-----RKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVE  235 (347)
T ss_dssp             HHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHH-----HHHHHHHHHHHHTSCSCEEESCTTCEECCEEHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCCEEEEEecceeCCCCCCCccc-----cccceeeehhhcCCcceeecCCCcceeeeeEecHHHH
Confidence            9999998864   5789999999999999965432100     11222233333333444443  445789999999999


Q ss_pred             HHHHHhcCCCCCCCeeEeccccccc
Q 023205          258 VAVRAATDPVFPPGIVDVHGILRYS  282 (286)
Q Consensus       258 ~~~~~l~~~~~~~~~~~l~~~~~~s  282 (286)
                      +++.++++..  .+.|++......+
T Consensus       236 a~~~~~~~~~--~~~~~~~~~~~~~  258 (347)
T d1t2aa_         236 AMWLMLQNDE--PEDFVIATGEVHS  258 (347)
T ss_dssp             HHHHHHHSSS--CCCEEECCSCCEE
T ss_pred             HHHHHhhcCC--Cccceeccccccc
Confidence            9999998765  4566666554443

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=99.97  E-value=6.5e-31  Score=226.77  Aligned_cols=224  Identities=19%  Similarity=0.142  Sum_probs=166.5

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc-------cccCCceeEEeccCCCHhHHHHHhcCCCEEEE
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-------DSWANNVIWHQGNLLSSDSWKEALDGVTAVIS  127 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~  127 (286)
                      ..++|||||||||||++|+++|+++|++|++++|+..+...       ........++.+|+.|.+.+.+++.++|+|+|
T Consensus        10 ~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~v~~   89 (342)
T d1y1pa1          10 EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGVAH   89 (342)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEEEE
T ss_pred             CcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhcccchhhhh
Confidence            36899999999999999999999999999999998644211       11123456688999999999999999999999


Q ss_pred             ccccCCC---cchhhhhhhHHHHHHHHHHHHc-CCCEEEEEecCC--cC-C----------------------------C
Q 023205          128 CVGGFGS---NSYMYKINGTANINAIRAASEK-GVKRFVYISAAD--FG-V----------------------------A  172 (286)
Q Consensus       128 ~a~~~~~---~~~~~~~~~~~~~~l~~~a~~~-~v~~~v~~Ss~~--~~-~----------------------------~  172 (286)
                      +++....   +...+..|+.++.+++++|++. ++++|||+||+.  ++ .                            +
T Consensus        90 ~a~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~~~i~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~  169 (342)
T d1y1pa1          90 IASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDP  169 (342)
T ss_dssp             CCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHHSCTTST
T ss_pred             hcccccccccccccccchhhhHHHHHHhhhcccccccccccccceeeccCCCCCCCccccccccccccccccccccccCC
Confidence            9987643   3456678999999999999886 699999999942  11 0                            1


Q ss_pred             CccccchHHHHHHHHHHHHH-----hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccC
Q 023205          173 NYLLQGYYEGKRAAETELLT-----RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFT  247 (286)
Q Consensus       173 ~~~~~~y~~sK~~~E~~~~~-----~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  247 (286)
                      ..+...|+.+|..+|+++++     ..+++++++||+.+|||...+....     +....++.............++..+
T Consensus       170 ~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~i~p~~v~Gp~~~~~~~~-----~~~~~~~~~l~~g~~~~~~~~~~~~  244 (342)
T d1y1pa1         170 QKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQS-----GSTSGWMMSLFNGEVSPALALMPPQ  244 (342)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCC-----CHHHHHHHHHHTTCCCHHHHTCCSE
T ss_pred             CCCcCcccchhHhHHHHHHHhhhhcccccccceecccceeCCCCCccccc-----cchHHHHHHHHcCCcCcccCCccce
Confidence            12346799999999997753     2468899999999999865432111     2222333333332222223455667


Q ss_pred             CCccHHHHHHHHHHHhcCCCCCCCeeEeccccccccc
Q 023205          248 PPVNVTVVAKVAVRAATDPVFPPGIVDVHGILRYSQK  284 (286)
Q Consensus       248 ~~i~v~Dva~~~~~~l~~~~~~~~~~~l~~~~~~s~~  284 (286)
                      +|+|++|+|++++.+++++.. +..|++++++.++|+
T Consensus       245 ~~v~v~Dva~~~i~~l~~~~~-~g~~~~~~~~~~t~~  280 (342)
T d1y1pa1         245 YYVSAVDIGLLHLGCLVLPQI-ERRRVYGTAGTFDWN  280 (342)
T ss_dssp             EEEEHHHHHHHHHHHHHCTTC-CSCEEEECCEEECHH
T ss_pred             eeeeHHHHHHHHHHhhcCccc-cceEEEEcCCceEHH
Confidence            899999999999999998776 455667788888875

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.97  E-value=2.4e-30  Score=221.03  Aligned_cols=221  Identities=13%  Similarity=-0.012  Sum_probs=168.8

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc-----cccCCceeEEeccCCCHhHHHHHhcC--CCEEEEcc
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALDG--VTAVISCV  129 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~-----~~~~~~~~~i~~Dl~d~~~~~~~~~~--~d~vi~~a  129 (286)
                      |+|||||||||||++|+++|+++||+|++++|.......     ....++++++++|+.|.+.+.+.+..  .++++|++
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~~~a   80 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQEVYNLA   80 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHHHHHHhcccCCcEEEEccccChHHhhhhhcccccccccccc
Confidence            589999999999999999999999999999997654221     11235899999999999999988865  57888888


Q ss_pred             ccCC------CcchhhhhhhHHHHHHHHHHHHcCCC-EEEEEecCC-cCCC----------CccccchHHHHHHHHHHHH
Q 023205          130 GGFG------SNSYMYKINGTANINAIRAASEKGVK-RFVYISAAD-FGVA----------NYLLQGYYEGKRAAETELL  191 (286)
Q Consensus       130 ~~~~------~~~~~~~~~~~~~~~l~~~a~~~~v~-~~v~~Ss~~-~~~~----------~~~~~~y~~sK~~~E~~~~  191 (286)
                      +...      ++...++.|+.++.+++++|++.+++ +|++.||.. |+..          ..|.+.|+.+|..+|+++.
T Consensus        81 ~~~~~~~~~~~~~~~~~~n~~g~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~  160 (321)
T d1rpna_          81 AQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQDENTPFYPRSPYGVAKLYGHWITV  160 (321)
T ss_dssp             SCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHH
T ss_pred             ccccccccccchHHHHhhhhhchHHHHHHHHHhCCCcccccccchhhcCcccCCCCCCCCCccccChhHHHHHHHHHHHH
Confidence            7543      34566889999999999999998865 777887753 3221          1356889999999999876


Q ss_pred             H---hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCC--CCccCCCccHHHHHHHHHHHhcCC
Q 023205          192 T---RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLV--GPLFTPPVNVTVVAKVAVRAATDP  266 (286)
Q Consensus       192 ~---~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~i~v~Dva~~~~~~l~~~  266 (286)
                      .   ..+++++++||+.+|||.......     ...+...+.+......+....  |+..++|+|++|+|++++.+++++
T Consensus       161 ~~~~~~~~~~~~lr~~~vyGp~~~~~~~-----~~~i~~~~~~~~~~~~~~i~~g~g~~~r~~i~v~D~~~~~~~~~~~~  235 (321)
T d1rpna_         161 NYRESFGLHASSGILFNHESPLRGIEFV-----TRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQQD  235 (321)
T ss_dssp             HHHHHHCCCEEEEEECCEECTTSCTTSH-----HHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHHHHHHHSS
T ss_pred             HHHhhcCCcEEEEEEecccCCCcccccc-----HHHHHHHHHHHHhCCCCcEEECCCCeEEccEEeHHHHHHHHHHHhcC
Confidence            4   578999999999999997543311     112334444444444333323  455789999999999999999887


Q ss_pred             CCCCCeeEeccccccccc
Q 023205          267 VFPPGIVDVHGILRYSQK  284 (286)
Q Consensus       267 ~~~~~~~~l~~~~~~s~~  284 (286)
                      .  ++.||+++++..++.
T Consensus       236 ~--~~~~ni~~~~~~s~~  251 (321)
T d1rpna_         236 K--ADDYVVATGVTTTVR  251 (321)
T ss_dssp             S--CCCEEECCSCEEEHH
T ss_pred             C--cCCceecccccceeh
Confidence            5  678999999887754

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.97  E-value=2.9e-29  Score=216.77  Aligned_cols=228  Identities=20%  Similarity=0.169  Sum_probs=169.9

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCccc------ccccCCceeEEeccCCCHhHHHHHhc--CCCEEEEc
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSL------RDSWANNVIWHQGNLLSSDSWKEALD--GVTAVISC  128 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~------~~~~~~~~~~i~~Dl~d~~~~~~~~~--~~d~vi~~  128 (286)
                      |.|||||||||||++|+++|+++|++|++++|-.....      ......+++++++|+.|.+.++.+++  ++|+|||+
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vihl   81 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDSVIHF   81 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCEEEEC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhcccCCeEEEeecCCHHHHHHHHhccCCCEEEEc
Confidence            56999999999999999999999999999986433311      12235689999999999999999887  78999999


Q ss_pred             cccCC------CcchhhhhhhHHHHHHHHHHHHcCCCEEEEEecC-CcCCC--------------CccccchHHHHHHHH
Q 023205          129 VGGFG------SNSYMYKINGTANINAIRAASEKGVKRFVYISAA-DFGVA--------------NYLLQGYYEGKRAAE  187 (286)
Q Consensus       129 a~~~~------~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~-~~~~~--------------~~~~~~y~~sK~~~E  187 (286)
                      |+...      .+.....+|+.++.+++++|++.++++||++||. +|+..              ..|.+.|+.+|..+|
T Consensus        82 Aa~~~~~~~~~~~~~~~~~N~~~t~~ll~~~~~~~i~~~i~~SS~~vyg~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E  161 (347)
T d1z45a2          82 AGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKYAIE  161 (347)
T ss_dssp             CSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCCCCSHHHHHHHHHH
T ss_pred             cccccccccccCcccccccchhhhHHHHHHHHhcccceEEeecceeeecCcccCCCCCccccccCCCCCChhHhHHHHHH
Confidence            98764      3345678999999999999999999999999994 45422              124678999999999


Q ss_pred             HHHHH-----hCCCcEEEEeeCeeecCCCCCcccc-CccccCchHHHHHHhccc-CCCCCCCCC--------ccCCCccH
Q 023205          188 TELLT-----RYPYGGVILRPGFIYGTRTVGGMKL-PLGVIGSPMEMVLQHAKP-LSQLPLVGP--------LFTPPVNV  252 (286)
Q Consensus       188 ~~~~~-----~~g~~~~ilRp~~v~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~g~--------~~~~~i~v  252 (286)
                      +++++     ..+++++++||+.+||+...+.+.. +......++..+...... ..++.+.|+        ...+++++
T Consensus       162 ~~~~~~~~~~~~~~~~~~lR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~~~~~~d~~~~  241 (347)
T d1z45a2         162 NILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTPIRDYIHV  241 (347)
T ss_dssp             HHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------CCSSCEECEEEH
T ss_pred             HHHHHHHHhhccCCcEEEEeecceEeecCCCccCCCccccHHHHHHHHHHHHhcCCCCeEEeCCCccccCCceeeeeeee
Confidence            98864     3579999999999999876433211 112223455555554433 334544443        24578888


Q ss_pred             HHHHHHHHHHhcC------CCCCCCeeEeccccccccc
Q 023205          253 TVVAKVAVRAATD------PVFPPGIVDVHGILRYSQK  284 (286)
Q Consensus       253 ~Dva~~~~~~l~~------~~~~~~~~~l~~~~~~s~~  284 (286)
                      .|.+.+++.+++.      ....+++||+++++.++..
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Ni~~~~~~s~~  279 (347)
T d1z45a2         242 VDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVF  279 (347)
T ss_dssp             HHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCCEEHH
T ss_pred             ecccccccccccccccccccccccccceecCCCcccHH
Confidence            8888888887752      2334679999998888764

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=6.8e-29  Score=214.26  Aligned_cols=230  Identities=23%  Similarity=0.241  Sum_probs=169.6

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcc-----c-------ccccCCceeEEeccCCCHhHHHHHhcCC
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSS-----L-------RDSWANNVIWHQGNLLSSDSWKEALDGV  122 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~-----~-------~~~~~~~~~~i~~Dl~d~~~~~~~~~~~  122 (286)
                      |.+||||||||||||++|+++|+++|++|++++|.....     .       ......+++++++|++|.+.+++++.+.
T Consensus         1 M~kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~   80 (346)
T d1ek6a_           1 MAEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKY   80 (346)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHC
T ss_pred             CCCeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeecccccccccccccc
Confidence            457999999999999999999999999999998632211     0       1123468999999999999999988754


Q ss_pred             --CEEEEccccCC------CcchhhhhhhHHHHHHHHHHHHcCCCEEEEEecC-CcCCC-----------CccccchHHH
Q 023205          123 --TAVISCVGGFG------SNSYMYKINGTANINAIRAASEKGVKRFVYISAA-DFGVA-----------NYLLQGYYEG  182 (286)
Q Consensus       123 --d~vi~~a~~~~------~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~-~~~~~-----------~~~~~~y~~s  182 (286)
                        ++++|+|+...      ++...++.|+.++.++++++++.++++|+|+||+ .|+..           ..+.++|+.+
T Consensus        81 ~~~~i~h~Aa~~~~~~~~~~p~~~~~~Nv~gt~~l~~~~~~~~v~~~i~~ss~~~~~~~~~~~~~~~~~~~~~~~~Y~~~  160 (346)
T d1ek6a_          81 SFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKS  160 (346)
T ss_dssp             CEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSSHHHHH
T ss_pred             ccccccccccccCcHhhHhCHHHHHHhhhcccccccchhhhcCcccccccccceeeeccccccccccccccccCChHHHH
Confidence              68999998754      3456689999999999999999999999999985 23321           2346789999


Q ss_pred             HHHHHHHHHH----hCCCcEEEEeeCeeecCCCCCccc-cCccccCchHHHHHHhccc-CCCCC--------CCCCccCC
Q 023205          183 KRAAETELLT----RYPYGGVILRPGFIYGTRTVGGMK-LPLGVIGSPMEMVLQHAKP-LSQLP--------LVGPLFTP  248 (286)
Q Consensus       183 K~~~E~~~~~----~~g~~~~ilRp~~v~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~--------~~g~~~~~  248 (286)
                      |..+|+.+.+    ..+++++++||+.+||+....... .+......+...+...... ..++.        ..|.+.++
T Consensus       161 k~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~g~~~Rd  240 (346)
T d1ek6a_         161 KFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRD  240 (346)
T ss_dssp             HHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEEC
T ss_pred             HHHHHHHHHHHHHhccCCceEEEeecceeccCCCCCcCccccccHHHHHHHHHHHHHcCCCcEEEcCCcccCCCCCeeEe
Confidence            9999998764    368999999999999997643321 1122223344444433222 22222        12445678


Q ss_pred             CccHHHHHHHHHHHhcC--CCCCCCeeEeccccccccc
Q 023205          249 PVNVTVVAKVAVRAATD--PVFPPGIVDVHGILRYSQK  284 (286)
Q Consensus       249 ~i~v~Dva~~~~~~l~~--~~~~~~~~~l~~~~~~s~~  284 (286)
                      |+|++|+|.++..++..  ....+++||+++++.++..
T Consensus       241 fi~v~D~a~~~~~~~~~~~~~~~~~i~Ni~~~~~~s~~  278 (346)
T d1ek6a_         241 YIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVL  278 (346)
T ss_dssp             EEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCCEEHH
T ss_pred             EEEEEeccchhhhhccccccccCceEEEeCCCCcccHH
Confidence            99999999999887543  2334679999999887754

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.97  E-value=3.8e-30  Score=225.97  Aligned_cols=228  Identities=14%  Similarity=0.171  Sum_probs=164.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEec---C----------CCc--cc-------ccccCCceeEEeccCCCHh
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSR---S----------GRS--SL-------RDSWANNVIWHQGNLLSSD  113 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R---~----------~~~--~~-------~~~~~~~~~~i~~Dl~d~~  113 (286)
                      +|+|||||||||||++|+++|+++||+|++++.   .          ...  ..       .....++++++++|++|.+
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~   80 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFE   80 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccCCCHH
Confidence            478999999999999999999999999999861   0          000  00       0112368999999999999


Q ss_pred             HHHHHhcC--CCEEEEccccCCC---------cchhhhhhhHHHHHHHHHHHHcCCC-EEEEEecC-CcCC---------
Q 023205          114 SWKEALDG--VTAVISCVGGFGS---------NSYMYKINGTANINAIRAASEKGVK-RFVYISAA-DFGV---------  171 (286)
Q Consensus       114 ~~~~~~~~--~d~vi~~a~~~~~---------~~~~~~~~~~~~~~l~~~a~~~~v~-~~v~~Ss~-~~~~---------  171 (286)
                      .+++++++  +|+|||+|+....         +...++.|+.|+.+++++|++.+++ ++++.||. .|+.         
T Consensus        81 ~l~~~~~~~~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~~~  160 (393)
T d1i24a_          81 FLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPNIDIEEGY  160 (393)
T ss_dssp             HHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCCSSCBCSSE
T ss_pred             HHHHHHHhhcchheeccccccccccccccccccccccccccccccHHHHHHHHhccccceeecccccccccccccccccc
Confidence            99999985  5999999986431         1245689999999999999998865 56666664 2321         


Q ss_pred             --------------CCccccchHHHHHHHHHHHHH---hCCCcEEEEeeCeeecCCCCCccccC--------ccccCchH
Q 023205          172 --------------ANYLLQGYYEGKRAAETELLT---RYPYGGVILRPGFIYGTRTVGGMKLP--------LGVIGSPM  226 (286)
Q Consensus       172 --------------~~~~~~~y~~sK~~~E~~~~~---~~g~~~~ilRp~~v~g~~~~~~~~~~--------~~~~~~~~  226 (286)
                                    +..|.+.|+.+|..+|.++..   ..+++++++||+.+||+........+        ....+..+
T Consensus       161 ~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~~l~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~i  240 (393)
T d1i24a_         161 ITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGTAL  240 (393)
T ss_dssp             EEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCSTTTCCHH
T ss_pred             ccccccccccccccccccccHHHHHhhhhcccccccccccceeeeecccccccCCCccccccccccccccccccccccch
Confidence                          123456799999999998763   67999999999999999764322111        11123345


Q ss_pred             HHHHHhcccCCCCCCCCCc--cCCCccHHHHHHHHHHHhcCCCCCCCeeEe-cccccccc
Q 023205          227 EMVLQHAKPLSQLPLVGPL--FTPPVNVTVVAKVAVRAATDPVFPPGIVDV-HGILRYSQ  283 (286)
Q Consensus       227 ~~~~~~~~~~~~~~~~g~~--~~~~i~v~Dva~~~~~~l~~~~~~~~~~~l-~~~~~~s~  283 (286)
                      ..+........++++.|++  .++|+|++|++++++.+++++...+..+.+ .+++.+|.
T Consensus       241 ~~~~~~~~~~~~~~i~g~~~~~rd~v~v~D~~~a~~~~~~~~~~~g~~~~~~~~~~~~si  300 (393)
T d1i24a_         241 NRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFTEQFSV  300 (393)
T ss_dssp             HHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCCCTTCEEEEEECSEEEEH
T ss_pred             hhhhHHhhcCCeeEEeeecccccccccccchHHHHHHHHHhhcccceeeeecCCCCeeEH
Confidence            5566655566677766544  689999999999999999887764543333 33445543

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=99.96  E-value=7.9e-29  Score=216.76  Aligned_cols=229  Identities=19%  Similarity=0.191  Sum_probs=164.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHH-CCCeEEEEecCCC---cc-------------------cccccCCceeEEeccCCCH
Q 023205           56 SEKLLVLGGNGFVGSHICREALD-RGLTVASLSRSGR---SS-------------------LRDSWANNVIWHQGNLLSS  112 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~-~g~~V~~l~R~~~---~~-------------------~~~~~~~~~~~i~~Dl~d~  112 (286)
                      .|+|||||||||||++|+++|++ .|++|+++++-..   ..                   .......++.++.+|++|.
T Consensus         2 ~MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~   81 (383)
T d1gy8a_           2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE   81 (383)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCH
Confidence            36999999999999999999997 6899999975111   00                   0111234788999999999


Q ss_pred             hHHHHHhc---CCCEEEEccccCC------CcchhhhhhhHHHHHHHHHHHHcCCCEEEEEecC-CcCC-----------
Q 023205          113 DSWKEALD---GVTAVISCVGGFG------SNSYMYKINGTANINAIRAASEKGVKRFVYISAA-DFGV-----------  171 (286)
Q Consensus       113 ~~~~~~~~---~~d~vi~~a~~~~------~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~-~~~~-----------  171 (286)
                      +.++++++   ++|+|||+|+...      .....++.|+.++.++++++++.+++++++.||. .|+.           
T Consensus        82 ~~l~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~N~~~t~~~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~  161 (383)
T d1gy8a_          82 DFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNAE  161 (383)
T ss_dssp             HHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTBSCCC-----CCC
T ss_pred             HHhhhhhhccceeehhhcccccccccccccccccccccccccccccchhhhccCCccccccccccccccccccccccccc
Confidence            99998885   6799999999764      2345678999999999999999999999999884 2221           


Q ss_pred             ------CCccccchHHHHHHHHHHHHH---hCCCcEEEEeeCeeecCCCCCccccCccccCchHHH----HHHhc-----
Q 023205          172 ------ANYLLQGYYEGKRAAETELLT---RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEM----VLQHA-----  233 (286)
Q Consensus       172 ------~~~~~~~y~~sK~~~E~~~~~---~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~----~~~~~-----  233 (286)
                            ...|.+.|+.+|..+|++++.   ..|++++++||+.+|||...................    +....     
T Consensus       162 ~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~gl~~~~lR~~~vyG~~~~~~~~~~~~~~~~~ip~ii~~~~~~~~~~~~  241 (383)
T d1gy8a_         162 PIDINAKKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAPDQR  241 (383)
T ss_dssp             CBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHHHSCC--
T ss_pred             ccccccCCCCCCHHHhhHhHHHHHHHHHHHHhCCCEEEEecceeeccCccccccccccccchhHHHHHHHHHhhcccccc
Confidence                  123568899999999998875   579999999999999998765543322211122222    11111     


Q ss_pred             -------ccCCCCCCC--------CCccCCCccHHHHHHHHHHHhcCC--------CCCCCeeEeccccccccc
Q 023205          234 -------KPLSQLPLV--------GPLFTPPVNVTVVAKVAVRAATDP--------VFPPGIVDVHGILRYSQK  284 (286)
Q Consensus       234 -------~~~~~~~~~--------g~~~~~~i~v~Dva~~~~~~l~~~--------~~~~~~~~l~~~~~~s~~  284 (286)
                             ....++++.        |.+.++|+|++|+|++++.+++..        ...+++||+++++.+++.
T Consensus       242 ~~~~~~~~~~~~~~i~g~~~~~~dg~~~Rdfi~v~D~~~a~~~~~~~~~~~~~~~~~~~~~i~Ni~s~~~~s~~  315 (383)
T d1gy8a_         242 LTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTSRGYSVR  315 (383)
T ss_dssp             ---------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCSCCEEHH
T ss_pred             chhhhhhhcCCceEEeCCccccCCCCeEEeeEEHHHHHHHHHHHHhhhccccccccccCccEEEeCCCCceeHH
Confidence                   111222222        344578999999999999988631        223468999998887764

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.96  E-value=1.6e-28  Score=211.18  Aligned_cols=220  Identities=13%  Similarity=-0.016  Sum_probs=158.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCccc-----------ccccCCceeEEeccCCCHhHHHHHhc--CC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSL-----------RDSWANNVIWHQGNLLSSDSWKEALD--GV  122 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~-----------~~~~~~~~~~i~~Dl~d~~~~~~~~~--~~  122 (286)
                      +|++||||||||||+||+++|+++||+|++++|..+...           .......++++.+|+.+.+.+...++  ++
T Consensus         1 ~k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~   80 (339)
T d1n7ha_           1 RKIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKP   80 (339)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCC
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhhhcc
Confidence            478999999999999999999999999999999654210           01123468899999999999998885  57


Q ss_pred             CEEEEccccCC------CcchhhhhhhHHHHHHHHHHHHc-----CCCEEEEEecCC-cCCC---------CccccchHH
Q 023205          123 TAVISCVGGFG------SNSYMYKINGTANINAIRAASEK-----GVKRFVYISAAD-FGVA---------NYLLQGYYE  181 (286)
Q Consensus       123 d~vi~~a~~~~------~~~~~~~~~~~~~~~l~~~a~~~-----~v~~~v~~Ss~~-~~~~---------~~~~~~y~~  181 (286)
                      |+|||+|+...      ++...+..|+.++.++++++++.     ...++++.||+. ++..         ..|.+.|+.
T Consensus        81 D~Vih~Aa~~~~~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~~~~~~~~E~~~~~p~~~Y~~  160 (339)
T d1n7ha_          81 DEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSETTPFHPRSPYAA  160 (339)
T ss_dssp             SEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSBCTTSCCCCCSHHHH
T ss_pred             chhhhccccccccccccCccccccccccccchhhhhhhhcccccccceeeeecccceecccCCCCCCCCCCCCCcchhhH
Confidence            99999998764      34467789999999999998753     234677777742 2221         235678999


Q ss_pred             HHHHHHHHHHH---hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCC--CCccCCCccHHHHH
Q 023205          182 GKRAAETELLT---RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLV--GPLFTPPVNVTVVA  256 (286)
Q Consensus       182 sK~~~E~~~~~---~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~i~v~Dva  256 (286)
                      +|..+|+++..   ..+++++++||+.+|||.......     ...+...+.............  +...+++++++|+|
T Consensus       161 sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~-----~~~i~~~~~~~~~~~~~~~~~g~~~~~rd~~~v~D~a  235 (339)
T d1n7ha_         161 SKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFV-----TRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYV  235 (339)
T ss_dssp             HHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSH-----HHHHHHHHHHHHHTSCCCEEESCTTCEEECEEHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCCEEEEEEccccCCCCCCCCC-----cchhhHHHHHHhcCCCCeEEeCCCCccccceeeehHH
Confidence            99999998754   578999999999999997543210     011222233333333333333  44578999999999


Q ss_pred             HHHHHHhcCCCCCCCeeEeccccccc
Q 023205          257 KVAVRAATDPVFPPGIVDVHGILRYS  282 (286)
Q Consensus       257 ~~~~~~l~~~~~~~~~~~l~~~~~~s  282 (286)
                      +++..+++++..  ..+++......+
T Consensus       236 ~~~~~~~~~~~~--~~~~~~~~~~~s  259 (339)
T d1n7ha_         236 EAMWLMLQQEKP--DDYVVATEEGHT  259 (339)
T ss_dssp             HHHHHHHTSSSC--CEEEECCSCEEE
T ss_pred             HHHHHHHhcCCC--Cccccccccccc
Confidence            999999998763  445555544444

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=99.96  E-value=2.5e-28  Score=207.86  Aligned_cols=210  Identities=16%  Similarity=0.127  Sum_probs=151.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhc--CCCEEEEccccCC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD--GVTAVISCVGGFG  133 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~--~~d~vi~~a~~~~  133 (286)
                      +|+|||||||||||++|+++|+++|+.|+++++..               +.|+.|.+.+.++++  .+|.|+|+|+...
T Consensus         2 kkkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~---------------~~~~~~~~~~~~~~~~~~~d~v~~~a~~~~   66 (315)
T d1e6ua_           2 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD---------------ELNLLDSRAVHDFFASERIDQVYLAAAKVG   66 (315)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT---------------TCCTTCHHHHHHHHHHHCCSEEEECCCCCC
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCch---------------hccccCHHHHHHHHhhcCCCEEEEcchhcc
Confidence            57999999999999999999999999988776542               258999999998886  4799999997654


Q ss_pred             -------CcchhhhhhhHHHHHHHHHHHHcCCCEEEEEecC-CcCCCC---------------ccccchHHHHHHHHHHH
Q 023205          134 -------SNSYMYKINGTANINAIRAASEKGVKRFVYISAA-DFGVAN---------------YLLQGYYEGKRAAETEL  190 (286)
Q Consensus       134 -------~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~-~~~~~~---------------~~~~~y~~sK~~~E~~~  190 (286)
                             +....++.|+.++.+++++|++.++++|||+||. +|+...               .+...|+.+|..+|+++
T Consensus        67 ~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~v~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~~  146 (315)
T d1e6ua_          67 GIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLC  146 (315)
T ss_dssp             CHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGGHHHHHHHHHHHHHH
T ss_pred             ccccchhhHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCceEcCCCCCCCccCCccccCCCCCCCCHHHHHHHHHHHHH
Confidence                   2345568999999999999999999999999994 555321               12346999999999988


Q ss_pred             HH---hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCC--CccCCCccHHHHHHHHHHHhcC
Q 023205          191 LT---RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVG--PLFTPPVNVTVVAKVAVRAATD  265 (286)
Q Consensus       191 ~~---~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--~~~~~~i~v~Dva~~~~~~l~~  265 (286)
                      +.   ..|++++++||+.+|||+.........-..................+...|  ...+++++++|+++++..++..
T Consensus       147 ~~~~~~~gl~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~v~d~~~~~~~~~~~  226 (315)
T d1e6ua_         147 ESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAASIHVMEL  226 (315)
T ss_dssp             HHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHHHHHHHHHHHHS
T ss_pred             HHHHHHhCCCEEEEeeccEECCCCCCCccccccceeeeccchhhhhccCCceEEcCCCceEEEEEEeehhHHHHHHhhhh
Confidence            64   569999999999999997643321111000011111222222334444443  4468999999999999999865


Q ss_pred             CC--------CCCCeeEeccccc
Q 023205          266 PV--------FPPGIVDVHGILR  280 (286)
Q Consensus       266 ~~--------~~~~~~~l~~~~~  280 (286)
                      ..        .....+++..+..
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~  249 (315)
T d1e6ua_         227 AHEVWLENTQPMLSHINVGTGVD  249 (315)
T ss_dssp             CHHHHHHTSBTTBCCEEESCSCC
T ss_pred             ccccccccccccccccccCCCcc
Confidence            32        1234566655443

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.95  E-value=1.2e-27  Score=195.67  Aligned_cols=203  Identities=19%  Similarity=0.135  Sum_probs=154.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC--eEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccccCC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGL--TVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFG  133 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~--~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~~~  133 (286)
                      |++||||||||+||+++++.|+++|+  .|++++|++++.  .....+++++.+|+.+.+.+.++++++|+|||+++...
T Consensus         3 ~~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~--~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~~   80 (252)
T d2q46a1           3 LPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGK--EKIGGEADVFIGDITDADSINPAFQGIDALVILTSAVP   80 (252)
T ss_dssp             CCEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHH--HHTTCCTTEEECCTTSHHHHHHHHTTCSEEEECCCCCC
T ss_pred             CCEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHH--HhccCCcEEEEeeeccccccccccccceeeEEEEeecc
Confidence            67999999999999999999999996  477788876542  22346899999999999999999999999999997542


Q ss_pred             -------------------CcchhhhhhhHHHHHHHHHHHHcCCCEEEEEecCCcCCCCcc-----ccchHHHHHHHHHH
Q 023205          134 -------------------SNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGVANYL-----LQGYYEGKRAAETE  189 (286)
Q Consensus       134 -------------------~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~~~~~~~~~-----~~~y~~sK~~~E~~  189 (286)
                                         .......+++.++.+++..+.....+++.+.|+........+     ...|...+...+.+
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (252)
T d2q46a1          81 KMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNPDHPLNKLGNGNILVWKRKAEQY  160 (252)
T ss_dssp             EECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTTCTTCGGGGGGGCCHHHHHHHHHHH
T ss_pred             ccccccchhhhhhcccccccchhhhccccccceeeccccccccccccccccccccCCCCcccccccccchhhhhhhhhhh
Confidence                               112344778899999999999999999999998544333332     33455666666654


Q ss_pred             HHHhCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcCCCCC
Q 023205          190 LLTRYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDPVFP  269 (286)
Q Consensus       190 ~~~~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~~~~  269 (286)
                      . ...|++++++||+++||+........                .  ...........++|+++|+|++++.++++++..
T Consensus       161 ~-~~~~~~~~ilRp~~v~g~~~~~~~~~----------------~--~~~~~~~~~~~~~i~~~Dva~a~~~~l~~~~~~  221 (252)
T d2q46a1         161 L-ADSGTPYTIIRAGGLLDKEGGVRELL----------------V--GKDDELLQTDTKTVPRADVAEVCIQALLFEEAK  221 (252)
T ss_dssp             H-HHSSSCEEEEEECEEECSCTTSSCEE----------------E--ESTTGGGGSSCCEEEHHHHHHHHHHHTTCGGGT
T ss_pred             h-hcccccceeecceEEECCCcchhhhh----------------h--ccCcccccCCCCeEEHHHHHHHHHHHhCCcccc
Confidence            3 35899999999999999875322100                0  001111234567999999999999999998888


Q ss_pred             CCeeEecccc
Q 023205          270 PGIVDVHGIL  279 (286)
Q Consensus       270 ~~~~~l~~~~  279 (286)
                      +++|||+++.
T Consensus       222 g~~~~i~~~~  231 (252)
T d2q46a1         222 NKAFDLGSKP  231 (252)
T ss_dssp             TEEEEEEECC
T ss_pred             CcEEEEeeCC
Confidence            9999998754

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=99.95  E-value=2.2e-27  Score=203.48  Aligned_cols=219  Identities=17%  Similarity=0.244  Sum_probs=161.3

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc-----cccCCceeEEeccCCCHhHHHHHhcCC--CEEEEccc
Q 023205           58 KLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALDGV--TAVISCVG  130 (286)
Q Consensus        58 ~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~-----~~~~~~~~~i~~Dl~d~~~~~~~~~~~--d~vi~~a~  130 (286)
                      ||||||||||||++|+++|+++|++|+++++-......     ....++++++++|++|.+.+.++++++  |+|||+|+
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~~~~~~~~i~~Di~~~~~l~~~~~~~~~d~Vih~aa   81 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHLAG   81 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHCCSEEEECCC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhhccCCcEEEEcccCCHHHHHHHHHhcCCceEEeecc
Confidence            79999999999999999999999999998753322111     122468999999999999999999864  99999999


Q ss_pred             cCC------CcchhhhhhhHHHHHHHHHHHHcCCCEEEEEecC-Cc-CCC--------------------------Cccc
Q 023205          131 GFG------SNSYMYKINGTANINAIRAASEKGVKRFVYISAA-DF-GVA--------------------------NYLL  176 (286)
Q Consensus       131 ~~~------~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~-~~-~~~--------------------------~~~~  176 (286)
                      ...      ++...+++|+.|+.|++++|.+.+++++|+.||. .+ +..                          ..+.
T Consensus        82 ~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~i~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (338)
T d1orra_          82 QVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDFH  161 (338)
T ss_dssp             CCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTSCCCCC
T ss_pred             cccccccccChHHHHHHHHHHHHHHHHhhhcccccccccccccccccccccccccccccccccccccccCcccCCccccc
Confidence            864      3356778999999999999999998776666663 21 111                          1245


Q ss_pred             cchHHHHHHHHHHHHH---hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhc-ccCCCCCCCCC--ccCCCc
Q 023205          177 QGYYEGKRAAETELLT---RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHA-KPLSQLPLVGP--LFTPPV  250 (286)
Q Consensus       177 ~~y~~sK~~~E~~~~~---~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~--~~~~~i  250 (286)
                      ..|+.+|...|.++..   ..++...++|+..+|++...+..  ....++.+........ ....++++.|+  ..++|+
T Consensus       162 ~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~r~~~  239 (338)
T d1orra_         162 SPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATY--DQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRDVL  239 (338)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBT--TBCHHHHHHHHHHHHHTTCCCCEEEESSSCCEEECE
T ss_pred             cccccccchhhhhhhhhhhccCcccccccccceeeccccccc--cccccchhhHHHHHHHhccCCceEEeCCCceeEeee
Confidence            6799999999997764   57899999999999977654332  1111222333332222 22345665554  468999


Q ss_pred             cHHHHHHHHHHHhcCCC-CCCCeeEeccc
Q 023205          251 NVTVVAKVAVRAATDPV-FPPGIVDVHGI  278 (286)
Q Consensus       251 ~v~Dva~~~~~~l~~~~-~~~~~~~l~~~  278 (286)
                      |++|++++++.+++++. ..+++|++.++
T Consensus       240 ~v~D~~~~~~~~l~~~~~~~~~~~~i~~~  268 (338)
T d1orra_         240 HAEDMISLYFTALANVSKIRGNAFNIGGT  268 (338)
T ss_dssp             EHHHHHHHHHHHHHTHHHHTTCEEEESSC
T ss_pred             cccchhhHHHHHHhccccccCcccccccc
Confidence            99999999999997643 45789998553

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.95  E-value=2e-27  Score=191.05  Aligned_cols=186  Identities=17%  Similarity=0.227  Sum_probs=135.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC--eEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHh-cCCCEEEEccccC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGL--TVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEAL-DGVTAVISCVGGF  132 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~--~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~-~~~d~vi~~a~~~  132 (286)
                      +|+|||||||||||++++++|+++|+  +|++++|++...     .+++   ..+..|..++...+ .++|+||||+|..
T Consensus         2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~~-----~~~~---~~~~~d~~~~~~~~~~~~d~vi~~~g~~   73 (212)
T d2a35a1           2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAE-----HPRL---DNPVGPLAELLPQLDGSIDTAFCCLGTT   73 (212)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCC-----CTTE---ECCBSCHHHHGGGCCSCCSEEEECCCCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchhh-----cccc---cccccchhhhhhccccchheeeeeeeee
Confidence            47999999999999999999999997  788888875432     1233   33444444444443 4589999999865


Q ss_pred             ----CCcchhhhhhhHHHHHHHHHHHHcCCCEEEEEecCCcCCCCccccchHHHHHHHHHHHHHhCCC-cEEEEeeCeee
Q 023205          133 ----GSNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLTRYPY-GGVILRPGFIY  207 (286)
Q Consensus       133 ----~~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~~~~g~-~~~ilRp~~v~  207 (286)
                          .......+.++.++.+++++|++.++++|+++||..  ....+.+.|.++|..+|+.+++ .++ +++|+||+.+|
T Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~~i~~Ss~~--~~~~~~~~y~~~K~~~E~~l~~-~~~~~~~I~Rp~~v~  150 (212)
T d2a35a1          74 IKEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALG--ADAKSSIFYNRVKGELEQALQE-QGWPQLTIARPSLLF  150 (212)
T ss_dssp             HHHHSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTT--CCTTCSSHHHHHHHHHHHHHTT-SCCSEEEEEECCSEE
T ss_pred             ccccccccccccchhhhhhhcccccccccccccccccccc--cccccccchhHHHHHHhhhccc-cccccceeeCCccee
Confidence                234567789999999999999999999999999953  3344567899999999998876 454 69999999999


Q ss_pred             cCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcCCCC
Q 023205          208 GTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDPVF  268 (286)
Q Consensus       208 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~~~  268 (286)
                      |+......  ..        ++   .   ..+....++.+.+|+++|+|++++.+++++..
T Consensus       151 G~~~~~~~--~~--------~~---~---~~~~~~~~~~~~~i~v~DvA~ai~~~~~~~~~  195 (212)
T d2a35a1         151 GPREEFRL--AE--------IL---A---APIARILPGKYHGIEACDLARALWRLALEEGK  195 (212)
T ss_dssp             STTSCEEG--GG--------GT---T---CCCC----CHHHHHHHHHHHHHHHHHHTCCCS
T ss_pred             CCcccccH--HH--------HH---H---HHHhhccCCCCcEEEHHHHHHHHHHHHcCCCC
Confidence            98753221  00        00   0   11111112344679999999999999988764

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=99.94  E-value=2.6e-27  Score=200.61  Aligned_cols=212  Identities=17%  Similarity=0.082  Sum_probs=157.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc-------cccCCceeEEeccCCCHhHHHHHhcCCCEEEEc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-------DSWANNVIWHQGNLLSSDSWKEALDGVTAVISC  128 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~  128 (286)
                      ++||||||||||||++++++|+++|++|++++|+......       .....+++++++|+.|.+.+.+.+.++++++++
T Consensus         3 k~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~~d~~d~~~~~~~~~~~~~~~~~   82 (312)
T d1qyda_           3 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVVISA   82 (312)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEEEEC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhccCCcEEEEeecccchhhhhhccCcchhhhh
Confidence            5689999999999999999999999999999998654321       123468999999999999999999999999999


Q ss_pred             cccCCCcchhhhhhhHHHHHHHHHHHHcCCCEEEEEecCCc-C----CCCccccchHHHHHHHHHHHHHhCCCcEEEEee
Q 023205          129 VGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAADF-G----VANYLLQGYYEGKRAAETELLTRYPYGGVILRP  203 (286)
Q Consensus       129 a~~~~~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~~~-~----~~~~~~~~y~~sK~~~E~~~~~~~g~~~~ilRp  203 (286)
                      ++...     ...+..+..+++++|++.+..++++.||... .    ....+...|...|..+++... ..+++++++||
T Consensus        83 ~~~~~-----~~~~~~~~~~~l~~a~~~~~~~~v~~Ss~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~r~  156 (312)
T d1qyda_          83 LAGGV-----LSHHILEQLKLVEAIKEAGNIKRFLPSEFGMDPDIMEHALQPGSITFIDKRKVRRAIE-AASIPYTYVSS  156 (312)
T ss_dssp             CCCSS-----SSTTTTTHHHHHHHHHHSCCCSEEECSCCSSCTTSCCCCCSSTTHHHHHHHHHHHHHH-HTTCCBCEEEC
T ss_pred             hhhcc-----cccchhhhhHHHHHHHHhcCCcEEEEeeccccCCCcccccchhhhhhHHHHHHHHhhc-ccccceEEecc
Confidence            87642     2345566778899999988777888887421 1    122345667888888888654 48899999999


Q ss_pred             CeeecCCCCCccccCccccCchHHHHHHhcccCCCCC--CCCCccCCCccHHHHHHHHHHHhcCCCCCCCe-eEeccccc
Q 023205          204 GFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLP--LVGPLFTPPVNVTVVAKVAVRAATDPVFPPGI-VDVHGILR  280 (286)
Q Consensus       204 ~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~~~~~~i~v~Dva~~~~~~l~~~~~~~~~-~~l~~~~~  280 (286)
                      +.+||+........           ..........+.  ..|+..++||+++|+|++++.++.++...++. |++.+++.
T Consensus       157 ~~~~g~~~~~~~~~-----------~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~l~~~~~~~~~~~~~~~~~~  225 (312)
T d1qyda_         157 NMFAGYFAGSLAQL-----------DGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTLNKTMYIRPPMNI  225 (312)
T ss_dssp             CEEHHHHTTTSSCT-----------TCCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTCGGGSSSEEECCCGGGE
T ss_pred             ceeecCCccchhhH-----------HHHhhhcccccccccccccccceeeHHHHHHHHHHHhcCccccCceEEEeCCCcC
Confidence            99999654221100           111111222333  33566889999999999999999998876776 45566677


Q ss_pred             cccc
Q 023205          281 YSQK  284 (286)
Q Consensus       281 ~s~~  284 (286)
                      +|++
T Consensus       226 ~s~~  229 (312)
T d1qyda_         226 LSQK  229 (312)
T ss_dssp             EEHH
T ss_pred             CCHH
Confidence            7764

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=99.94  E-value=9.9e-27  Score=194.50  Aligned_cols=196  Identities=19%  Similarity=0.215  Sum_probs=156.4

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhc--CCCEEEEccccCCC
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD--GVTAVISCVGGFGS  134 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~--~~d~vi~~a~~~~~  134 (286)
                      |||||||||||||++|+++|.++|++|++++|+.                .|+.|.+.++++++  ++|+|||+|+....
T Consensus         2 MKIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~----------------~D~~d~~~~~~~l~~~~~d~vih~a~~~~~   65 (281)
T d1vl0a_           2 MKILITGANGQLGREIQKQLKGKNVEVIPTDVQD----------------LDITNVLAVNKFFNEKKPNVVINCAAHTAV   65 (281)
T ss_dssp             EEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT----------------CCTTCHHHHHHHHHHHCCSEEEECCCCCCH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEeechh----------------ccCCCHHHHHHHHHHcCCCEEEeecccccc
Confidence            6799999999999999999999999999999873                58999999999987  56999999987642


Q ss_pred             ------cchhhhhhhHHHHHHHHHHHHcCCCEEEEEec-CCcCCC----------CccccchHHHHHHHHHHHHHhCCCc
Q 023205          135 ------NSYMYKINGTANINAIRAASEKGVKRFVYISA-ADFGVA----------NYLLQGYYEGKRAAETELLTRYPYG  197 (286)
Q Consensus       135 ------~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss-~~~~~~----------~~~~~~y~~sK~~~E~~~~~~~g~~  197 (286)
                            .......|.....++.+.+...+. .+++.|| .+++..          ..+...|+.+|...|+++.+ .+.+
T Consensus        66 ~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~~ss~~v~~~~~~~~~~e~~~~~~~~~~~~~k~~~e~~~~~-~~~~  143 (281)
T d1vl0a_          66 DKCEEQYDLAYKINAIGPKNLAAAAYSVGA-EIVQISTDYVFDGEAKEPITEFDEVNPQSAYGKTKLEGENFVKA-LNPK  143 (281)
T ss_dssp             HHHHHCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGSCSCCSSCBCTTSCCCCCSHHHHHHHHHHHHHHH-HCSS
T ss_pred             ccccccchhhcccccccccccccccccccc-cccccccceeeeccccccccccccccchhhhhhhhhHHHHHHHH-hCCC
Confidence                  234556777888888888877765 5666665 333322          23467799999999997766 6789


Q ss_pred             EEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcCCCCCCCeeEecc
Q 023205          198 GVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDPVFPPGIVDVHG  277 (286)
Q Consensus       198 ~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~l~~  277 (286)
                      ++++||+++||+..            .+...+.........+...++..+++++++|+++++..+++++.  .++||+++
T Consensus       144 ~~i~R~~~vyG~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~~~~~~~~~~~~~--~g~~~~~~  209 (281)
T d1vl0a_         144 YYIVRTAWLYGDGN------------NFVKTMINLGKTHDELKVVHDQVGTPTSTVDLARVVLKVIDEKN--YGTFHCTC  209 (281)
T ss_dssp             EEEEEECSEESSSS------------CHHHHHHHHHHHCSEEEEESSCEECCEEHHHHHHHHHHHHHHTC--CEEEECCC
T ss_pred             ccccceeEEeCCCc------------ccccchhhhhccCCceeecCCceeccchhhhhhhhhhhhhhhcc--cCceeEeC
Confidence            99999999999964            23444555555556667777889999999999999999998876  46999999


Q ss_pred             ccccccc
Q 023205          278 ILRYSQK  284 (286)
Q Consensus       278 ~~~~s~~  284 (286)
                      ++.+|+.
T Consensus       210 ~~~~s~~  216 (281)
T d1vl0a_         210 KGICSWY  216 (281)
T ss_dssp             BSCEEHH
T ss_pred             CCccchH
Confidence            9998875

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=99.94  E-value=6.1e-26  Score=196.07  Aligned_cols=204  Identities=15%  Similarity=0.066  Sum_probs=155.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc----cccCCceeEEeccCCCHhHHHHHhcC--CCEEEEcc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR----DSWANNVIWHQGNLLSSDSWKEALDG--VTAVISCV  129 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~----~~~~~~~~~i~~Dl~d~~~~~~~~~~--~d~vi~~a  129 (286)
                      .|+|||||||||||++|+++|+++|++|++++|+......    ....++++++.+|++|++.+.+++++  +|+|+|+|
T Consensus         8 ~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~l~~~~~~~~~~~v~~~a   87 (356)
T d1rkxa_           8 GKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREFQPEIVFHMA   87 (356)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhhcccCCeEEEeeccChHhhhhhhhhchhhhhhhhh
Confidence            5899999999999999999999999999999998765322    12246899999999999999998874  69999999


Q ss_pred             ccCC------CcchhhhhhhHHHHHHHHHHHHcCCC-EEEEEecCCcCC------------CCccccchHHHHHHHHHHH
Q 023205          130 GGFG------SNSYMYKINGTANINAIRAASEKGVK-RFVYISAADFGV------------ANYLLQGYYEGKRAAETEL  190 (286)
Q Consensus       130 ~~~~------~~~~~~~~~~~~~~~l~~~a~~~~v~-~~v~~Ss~~~~~------------~~~~~~~y~~sK~~~E~~~  190 (286)
                      +...      .+...+.+|+.++.++++++++.+.+ .+++.|+..+..            ...|.++|+.+|...|..+
T Consensus        88 a~~~~~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~y~~~k~~~e~~~  167 (356)
T d1rkxa_          88 AQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRENEAMGGYDPYSNSKGCAELVT  167 (356)
T ss_dssp             SCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTTSCBCCSSHHHHHHHHHHHHH
T ss_pred             ccccccccccCCccccccccccchhhhhhhhccccccccccccccccccccccccccccccccCCCCccccccccchhhh
Confidence            8753      33567789999999999999987654 555555532211            1235678999999999866


Q ss_pred             HH------------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCC-CCCCccCCCccHHHHHH
Q 023205          191 LT------------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLP-LVGPLFTPPVNVTVVAK  257 (286)
Q Consensus       191 ~~------------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~i~v~Dva~  257 (286)
                      ..            ..++.++++||+.+|||.+...        ..++..+.+.......+. ..++..+++++++|++.
T Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~--------~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~D~~~  239 (356)
T d1rkxa_         168 SSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWAL--------DRIVPDILRAFEQSQPVIIRNPHAIRPWQHVLEPLS  239 (356)
T ss_dssp             HHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCS--------SCHHHHHHHHHHTTCCEECSCTTCEECCEETHHHHH
T ss_pred             hHHhhhcccchhccccCceEEeccCCCeeCCCcchh--------hHHHHHHHHHHhCCCceEEeeccccccccccccccc
Confidence            53            3578999999999999976332        234444555544444333 34566789999999999


Q ss_pred             HHHHHhcCCC
Q 023205          258 VAVRAATDPV  267 (286)
Q Consensus       258 ~~~~~l~~~~  267 (286)
                      +++.++.++.
T Consensus       240 a~~~~~~~~~  249 (356)
T d1rkxa_         240 GYLLLAQKLY  249 (356)
T ss_dssp             HHHHHHHHHH
T ss_pred             hhhhhhhhhc
Confidence            9999887644

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=99.93  E-value=4.5e-26  Score=191.94  Aligned_cols=207  Identities=20%  Similarity=0.179  Sum_probs=154.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc--------cccCCceeEEeccCCCHhHHHHHhcCCCEEEE
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--------DSWANNVIWHQGNLLSSDSWKEALDGVTAVIS  127 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~--------~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~  127 (286)
                      ++||||||||||||++++++|+++|++|++++|+......        .....+++++.+|+.+.+.+.+.+++++.|+|
T Consensus         3 kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~vi~   82 (307)
T d1qyca_           3 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDVVIS   82 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTCSEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhccCCcEEEEeecccchhhhhhhhhceeeee
Confidence            6799999999999999999999999999999998655321        12246799999999999999999999999999


Q ss_pred             ccccCCCcchhhhhhhHHHHHHHHHHHHcCCCEEEEEecCCcCCCCc----cccchHHHHHHHHHHHHHhCCCcEEEEee
Q 023205          128 CVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGVANY----LLQGYYEGKRAAETELLTRYPYGGVILRP  203 (286)
Q Consensus       128 ~a~~~~~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~~~~~~~~----~~~~y~~sK~~~E~~~~~~~g~~~~ilRp  203 (286)
                      +++..         +..+..++++++..++++++++.|+........    +...+...+...|..+.+ .+++++++||
T Consensus        83 ~~~~~---------~~~~~~~~~~a~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~r~  152 (307)
T d1qyca_          83 TVGSL---------QIESQVNIIKAIKEVGTVKRFFPSEFGNDVDNVHAVEPAKSVFEVKAKVRRAIEA-EGIPYTYVSS  152 (307)
T ss_dssp             CCCGG---------GSGGGHHHHHHHHHHCCCSEEECSCCSSCTTSCCCCTTHHHHHHHHHHHHHHHHH-HTCCBEEEEC
T ss_pred             ccccc---------ccchhhHHHHHHHHhccccceeeeccccccccccccccccccccccccccchhhc-cCCCceeccc
Confidence            98653         334455778999999999999999854433322    234566777777776654 7899999999


Q ss_pred             CeeecCCCCCccccCccccCchHHHHHHhcccCC--CCCCCCCccCCCccHHHHHHHHHHHhcCCCCCCCe-eEeccccc
Q 023205          204 GFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLS--QLPLVGPLFTPPVNVTVVAKVAVRAATDPVFPPGI-VDVHGILR  280 (286)
Q Consensus       204 ~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~g~~~~~~i~v~Dva~~~~~~l~~~~~~~~~-~~l~~~~~  280 (286)
                      +.+||+.......            +........  .++..++..++||+++|+|++++.+++++...++. |++++++.
T Consensus       153 ~~v~g~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~~~~~~~~  220 (307)
T d1qyca_         153 NCFAGYFLRSLAQ------------AGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPRTLNKTLYLRLPANT  220 (307)
T ss_dssp             CEEHHHHTTTTTC------------TTCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSCGGGTTEEEECCCGGGE
T ss_pred             ceecCCCccchhh------------hhhhhhhcccceeeecccccccCCcHHHHHHHHHHHhcChhhcCceeEEeCCCCc
Confidence            9999975432110            011111112  22344566899999999999999999988766665 55567788


Q ss_pred             cccc
Q 023205          281 YSQK  284 (286)
Q Consensus       281 ~s~~  284 (286)
                      +|+.
T Consensus       221 ~s~~  224 (307)
T d1qyca_         221 LSLN  224 (307)
T ss_dssp             EEHH
T ss_pred             cCHH
Confidence            8764

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=99.91  E-value=3.9e-24  Score=179.74  Aligned_cols=202  Identities=18%  Similarity=0.231  Sum_probs=147.8

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcC--CCEEEEccccCC-
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDG--VTAVISCVGGFG-  133 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~--~d~vi~~a~~~~-  133 (286)
                      |+|||||||||||++|+++|.++|+ ++++.++...            +.+|++|.+.+++++++  +|+|||+||... 
T Consensus         1 MKILItG~tGfiG~~l~~~L~~~g~-~v~~~~~~~~------------~~~Dl~~~~~~~~~i~~~~~D~Vih~Aa~~~~   67 (298)
T d1n2sa_           1 MNILLFGKTGQVGWELQRSLAPVGN-LIALDVHSKE------------FCGDFSNPKGVAETVRKLRPDVIVNAAAHTAV   67 (298)
T ss_dssp             CEEEEECTTSHHHHHHHHHTTTTSE-EEEECTTCSS------------SCCCTTCHHHHHHHHHHHCCSEEEECCCCCCH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCC-EEEEECCCcc------------ccCcCCCHHHHHHHHHHcCCCEEEEecccccc
Confidence            6899999999999999999998885 5555555332            24799999999999975  599999998653 


Q ss_pred             -----CcchhhhhhhHHHHHHHHHHHHcCCCEEEEEecC-CcCCC----------CccccchHHHHHHHHHHHHHhCCCc
Q 023205          134 -----SNSYMYKINGTANINAIRAASEKGVKRFVYISAA-DFGVA----------NYLLQGYYEGKRAAETELLTRYPYG  197 (286)
Q Consensus       134 -----~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~-~~~~~----------~~~~~~y~~sK~~~E~~~~~~~g~~  197 (286)
                           .+...++.|+.++.++++++++.++ +++++||+ .|+..          ..|.+.|+.+|..+|+.+.+... .
T Consensus        68 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~ss~~~~~~~~~~~~~E~~~~~p~~~y~~~k~~~e~~~~~~~~-~  145 (298)
T d1n2sa_          68 DKAESEPELAQLLNATSVEAIAKAANETGA-WVVHYSTDYVFPGTGDIPWQETDATSPLNVYGKTKLAGEKALQDNCP-K  145 (298)
T ss_dssp             HHHTTCHHHHHHHHTHHHHHHHHHHTTTTC-EEEEEEEGGGSCCCTTCCBCTTSCCCCSSHHHHHHHHHHHHHHHHCS-S
T ss_pred             cccccCccccccccccccccchhhhhcccc-ccccccccccccCCCCCCCccccccCCCchHhhhhhhhhhhHHhhhc-c
Confidence                 3345678899999999999998886 56666664 33221          12467899999999998877444 5


Q ss_pred             EEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhc---CCCCCCCeeE
Q 023205          198 GVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAAT---DPVFPPGIVD  274 (286)
Q Consensus       198 ~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~---~~~~~~~~~~  274 (286)
                      ..++|++..++....           .....+.........+...++...++++++|+++++..++.   .....+++||
T Consensus       146 ~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~i~~~~~~~~~~~~~n  214 (298)
T d1n2sa_         146 HLIFRTSWVYAGKGN-----------NFAKTMLRLAKERQTLSVINDQYGAPTGAELLADCTAHAIRVALNKPEVAGLYH  214 (298)
T ss_dssp             EEEEEECSEECSSSC-----------CHHHHHHHHHHHCSEEEEECSCEECCEEHHHHHHHHHHHHHHHHHCGGGCEEEE
T ss_pred             cccccccceeeccCC-----------ccchhhhhhhcccceeecccceeecccccchHHHHHHHHHhhhhcccccccccc
Confidence            566776666644321           22333444444445555666778899999999999888775   2223478999


Q ss_pred             eccccccccc
Q 023205          275 VHGILRYSQK  284 (286)
Q Consensus       275 l~~~~~~s~~  284 (286)
                      +++++.+++.
T Consensus       215 ~~~~~~~~~~  224 (298)
T d1n2sa_         215 LVAGGTTTWH  224 (298)
T ss_dssp             CCCBSCEEHH
T ss_pred             ccCCCceecH
Confidence            9999887764

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=99.90  E-value=5.8e-24  Score=183.35  Aligned_cols=214  Identities=14%  Similarity=0.056  Sum_probs=154.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCccccc--ccCCceeEEeccCCCH-hHHHHHhcCCCEEEEccccC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRD--SWANNVIWHQGNLLSS-DSWKEALDGVTAVISCVGGF  132 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~--~~~~~~~~i~~Dl~d~-~~~~~~~~~~d~vi~~a~~~  132 (286)
                      +|+|+||||||+||++++++|+++||+|++++|++++....  ...++++++++|+.|. +.++.++.++|+++++....
T Consensus         3 kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~v~~~~gD~~d~~~~~~~a~~~~~~~~~~~~~~   82 (350)
T d1xgka_           3 KKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFEGAHLAFINTTSQ   82 (350)
T ss_dssp             CCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHHHTTCSEEEECCCST
T ss_pred             CCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhhhhhcccCCCEEEEeeCCCcHHHHHHHhcCCceEEeecccc
Confidence            67999999999999999999999999999999987663221  2346899999999885 45788999999999886542


Q ss_pred             CCcchhhhhhhHHHHHHHHHHHHcCCCEEEEEecCCcC--CCCccccchHHHHHHHHHHHHHhCCCcEEEEeeCeeecCC
Q 023205          133 GSNSYMYKINGTANINAIRAASEKGVKRFVYISAADFG--VANYLLQGYYEGKRAAETELLTRYPYGGVILRPGFIYGTR  210 (286)
Q Consensus       133 ~~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~~~~--~~~~~~~~y~~sK~~~E~~~~~~~g~~~~ilRp~~v~g~~  210 (286)
                            ...+.....+++++|++++++++++.||....  ....+...|..+|...|.++.+ .+++++++||+.+++..
T Consensus        83 ------~~~~~~~~~~~~~aa~~agv~~~v~~Ss~~~~~~~~~~~~~~~~~~k~~~~~~~~~-~~~~~~~vr~~~~~~~~  155 (350)
T d1xgka_          83 ------AGDEIAIGKDLADAAKRAGTIQHYIYSSMPDHSLYGPWPAVPMWAPKFTVENYVRQ-LGLPSTFVYAGIYNNNF  155 (350)
T ss_dssp             ------TSCHHHHHHHHHHHHHHHSCCSEEEEEECCCGGGTSSCCCCTTTHHHHHHHHHHHT-SSSCEEEEEECEEGGGC
T ss_pred             ------cchhhhhhhHHHHHHHHhCCCceEEEeeccccccCCcccchhhhhhHHHHHHHHHh-hccCceeeeeceeeccc
Confidence                  23455677899999999999888888885322  2233456788999999987765 78999999999998754


Q ss_pred             CCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccH-HHHHHHHHHHhcCC--CCCCCeeEeccccccccc
Q 023205          211 TVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNV-TVVAKVAVRAATDP--VFPPGIVDVHGILRYSQK  284 (286)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v-~Dva~~~~~~l~~~--~~~~~~~~l~~~~~~s~~  284 (286)
                      ..........  ..     ..........+..++....++++ +|+++++..++..+  .+.|+.|+++++ .+|+.
T Consensus       156 ~~~~~~~~~~--~~-----~~~~~~~~~~~~~~~~~~~~i~~~~Dva~~v~~~l~~~~~~~~G~~~~~~g~-~~T~~  224 (350)
T d1xgka_         156 TSLPYPLFQM--EL-----MPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHRIALTFE-TLSPV  224 (350)
T ss_dssp             BSSSCSSCBE--EE-----CTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHCHHHHTTCEEEECSE-EECHH
T ss_pred             cccccccccc--cc-----cccccceeeecccCCCcceEEEeHHHHHHHHHHHHhCChhhcCCeEEEEeCC-cCCHH
Confidence            3222111000  00     00000011234446667778876 79999999999653  346889999985 46654

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=99.90  E-value=5.7e-23  Score=173.15  Aligned_cols=216  Identities=19%  Similarity=0.143  Sum_probs=145.2

Q ss_pred             EEEEcCCChhHHHHHHHHHHCCC-eEEEEecCCCcccccccCCceeEEeccCCCHhHH-HH-----HhcCCCEEEEcccc
Q 023205           59 LLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSW-KE-----ALDGVTAVISCVGG  131 (286)
Q Consensus        59 VlVtGatG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~-~~-----~~~~~d~vi~~a~~  131 (286)
                      ||||||+||||++|+++|+++|+ +|+++++-.........   .+....|..+.+.+ ..     .+..+++|+|+|+.
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~aa~   78 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNL---VDLNIADYMDKEDFLIQIMAGEEFGDVEAIFHEGAC   78 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHH---HTSCCSEEEEHHHHHHHHHTTCCCSSCCEEEECCSC
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcchhhcc---cccchhhhccchHHHHHHhhhhcccchhhhhhhccc
Confidence            89999999999999999999995 78888643332111000   11111222222222 22     23468999999975


Q ss_pred             CC----CcchhhhhhhHHHHHHHHHHHHcCCCEEEEEecCCcCCC----------CccccchHHHHHHHHHHHHH---hC
Q 023205          132 FG----SNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGVA----------NYLLQGYYEGKRAAETELLT---RY  194 (286)
Q Consensus       132 ~~----~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~~~~~~----------~~~~~~y~~sK~~~E~~~~~---~~  194 (286)
                      ..    +.......++.++.+++++++..+++.+++.|+..+...          ..+.+.|+.+|..+|.++..   ..
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~v~~ss~~~~~~~~~~~~~~~~~~~~~~~Y~~~K~~~e~~~~~~~~~~  158 (307)
T d1eq2a_          79 SSTTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATYGGRTSDFIESREYEKPLNVYGYSKFLFDEYVRQILPEA  158 (307)
T ss_dssp             CCTTCCCHHHHHHHTHHHHHHHHHHHHHHTCCEEEEEEGGGGTTCCSCBCSSGGGCCCSSHHHHHHHHHHHHHHHHGGGC
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhcccccccc
Confidence            53    233455777889999999999999976666666543322          23567899999999998874   67


Q ss_pred             CCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCC-CCC--CccCCCccHHHHHHHHHHHhcCCCCCCC
Q 023205          195 PYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLP-LVG--PLFTPPVNVTVVAKVAVRAATDPVFPPG  271 (286)
Q Consensus       195 g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g--~~~~~~i~v~Dva~~~~~~l~~~~~~~~  271 (286)
                      +++++++||+.+|||......     ........+........... ..|  ...+++++++|+++++..++.++.  .+
T Consensus       159 ~~~~~~~r~~~vyGp~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~d~~~~~~~~~~~~~--~~  231 (307)
T d1eq2a_         159 NSQIVGFRYFNVYGPREGHKG-----SMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGV--SG  231 (307)
T ss_dssp             SSCEEEEEECEEESSSCGGGG-----GGSCHHHHHHHHHHC-------------CBCEEEHHHHHHHHHHHHHHCC--CE
T ss_pred             ccccccccceeEeeccccccc-----cccccccccccccccccceeeecCccceeeeeeecccHHHHHHHHhhhcc--cc
Confidence            999999999999999764331     11233444444444333222 223  337899999999999999998765  67


Q ss_pred             eeEeccccccccc
Q 023205          272 IVDVHGILRYSQK  284 (286)
Q Consensus       272 ~~~l~~~~~~s~~  284 (286)
                      .|++++++.++++
T Consensus       232 ~~~~~~~~~~si~  244 (307)
T d1eq2a_         232 IFNLGTGRAESFQ  244 (307)
T ss_dssp             EEEESCSCCBCHH
T ss_pred             ccccccccchhHH
Confidence            9999999888765

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.89  E-value=5.8e-22  Score=161.11  Aligned_cols=203  Identities=20%  Similarity=0.173  Sum_probs=148.9

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhc-------CCCEE
Q 023205           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD-------GVTAV  125 (286)
Q Consensus        53 ~~~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d~v  125 (286)
                      +.+.|++|||||++.||+.+++.|+++|++|++.+|+.+.      ..++..+++|++|+++++++++       .+|++
T Consensus         4 sl~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDiL   77 (237)
T d1uzma1           4 PFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGA------PKGLFGVEVDVTDSDAVDRAFTAVEEHQGPVEVL   77 (237)
T ss_dssp             CCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCC------CTTSEEEECCTTCHHHHHHHHHHHHHHHSSCSEE
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcch------hcCceEEEEecCCHHHHHHHHHHHHHhcCCceEE
Confidence            4567899999999999999999999999999999998765      3467889999999998887764       58999


Q ss_pred             EEccccCC----------CcchhhhhhhHHHHHHHHHH----HHcCCCEEEEEecCCcCCCCccccchHHHHHHHHHHHH
Q 023205          126 ISCVGGFG----------SNSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELL  191 (286)
Q Consensus       126 i~~a~~~~----------~~~~~~~~~~~~~~~l~~~a----~~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~  191 (286)
                      |||||...          .+...+++|+.++..+.+.+    ++.+-.+||++||...-........|+.+|...+.+.+
T Consensus        78 VnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~lt~  157 (237)
T d1uzma1          78 VSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAASKAGVIGMAR  157 (237)
T ss_dssp             EEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----CCHHHHHHHHHHHHHHH
T ss_pred             EeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCceEEEcchhhccCCcccHHHHHHHHHHHHHHH
Confidence            99998652          12356789999988776654    44555699999996433333456789999999998765


Q ss_pred             H------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcC
Q 023205          192 T------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATD  265 (286)
Q Consensus       192 ~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~  265 (286)
                      .      ..|++++.|.||.+..+....           ..+.......  ..+|+     ..+...+|+|+++..++.+
T Consensus       158 ~lA~e~~~~gIrVN~I~PG~v~T~~~~~-----------~~~~~~~~~~--~~~pl-----~R~~~pedvA~~v~fL~S~  219 (237)
T d1uzma1         158 SIARELSKANVTANVVAPGYIDTDMTRA-----------LDERIQQGAL--QFIPA-----KRVGTPAEVAGVVSFLASE  219 (237)
T ss_dssp             HHHHHHGGGTEEEEEEEECSBCCHHHHH-----------SCHHHHHHHG--GGCTT-----CSCBCHHHHHHHHHHHHSG
T ss_pred             HHHhhhhcCCceeeeeeeCcCCChhhhc-----------cCHHHHHHHH--hcCCC-----CCCcCHHHHHHHHHHHhCc
Confidence            3      578999999999986432110           0011111111  12332     2467899999999999864


Q ss_pred             C--CCCCCeeEecccc
Q 023205          266 P--VFPPGIVDVHGIL  279 (286)
Q Consensus       266 ~--~~~~~~~~l~~~~  279 (286)
                      .  ...|+++.+.|+-
T Consensus       220 ~s~~itG~~i~vdGG~  235 (237)
T d1uzma1         220 DASYISGAVIPVDGGM  235 (237)
T ss_dssp             GGTTCCSCEEEESTTT
T ss_pred             hhcCCcCCeEEECCCC
Confidence            3  3568999998874

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.88  E-value=1.7e-21  Score=158.89  Aligned_cols=205  Identities=19%  Similarity=0.154  Sum_probs=152.7

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCccc--ccccCCceeEEeccCCCHhHHHHHhc-------CCCE
Q 023205           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSL--RDSWANNVIWHQGNLLSSDSWKEALD-------GVTA  124 (286)
Q Consensus        54 ~~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~--~~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d~  124 (286)
                      ...|+++||||++.||+++++.|+++|++|++.+|++++..  .+....++.++++|++|+++++++++       .+|+
T Consensus         4 L~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~idi   83 (244)
T d1nffa_           4 LTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHV   83 (244)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhCcceEEEeecCCHHHHHHHHHHHHHHhCCCeE
Confidence            34689999999999999999999999999999999875421  12234578899999999998887764       5799


Q ss_pred             EEEccccCCC----------cchhhhhhhHHHHHHHHHHH----HcCCCEEEEEecCCcCCCCccccchHHHHHHHHHHH
Q 023205          125 VISCVGGFGS----------NSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEGKRAAETEL  190 (286)
Q Consensus       125 vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~----~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~  190 (286)
                      +|||||....          +...+++|+.++..+.+.+.    +.+-.+||++||............|+.+|...+.+.
T Consensus        84 linnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaal~~lt  163 (244)
T d1nffa_          84 LVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLT  163 (244)
T ss_dssp             EEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHH
T ss_pred             EEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEeccccccccccccccchhhHHHHHHHHH
Confidence            9999997532          23567899999988877653    344458999999643333445678999999999877


Q ss_pred             HH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhc
Q 023205          191 LT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAAT  264 (286)
Q Consensus       191 ~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~  264 (286)
                      +.      ..|++++.|.||.+..+.....                  .......|+     ..+..++|+|+++..++.
T Consensus       164 k~lA~el~~~gIrVN~I~PG~i~T~~~~~~------------------~~~~~~~pl-----~R~~~p~diA~~v~fL~s  220 (244)
T d1nffa_         164 KSTALELGPSGIRVNSIHPGLVKTPMTDWV------------------PEDIFQTAL-----GRAAEPVEVSNLVVYLAS  220 (244)
T ss_dssp             HHHHHHHGGGTEEEEEEEECCBCSGGGTTS------------------CTTCSCCSS-----SSCBCHHHHHHHHHHHHS
T ss_pred             HHHHHHhcccCEEEEEEeeCCccChhHhhh------------------hHHHHhccc-----cCCCCHHHHHHHHHHHhC
Confidence            53      5789999999998865432100                  011112232     246889999999999985


Q ss_pred             C--CCCCCCeeEecccccc
Q 023205          265 D--PVFPPGIVDVHGILRY  281 (286)
Q Consensus       265 ~--~~~~~~~~~l~~~~~~  281 (286)
                      .  ....|+++.+.|+...
T Consensus       221 ~~s~~itG~~i~vDGG~~a  239 (244)
T d1nffa_         221 DESSYSTGAEFVVDGGTVA  239 (244)
T ss_dssp             GGGTTCCSCEEEESTTGGG
T ss_pred             hhhCCCcCCEEEECCCeec
Confidence            4  3357899999987654

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=99.88  E-value=3.6e-21  Score=157.50  Aligned_cols=210  Identities=11%  Similarity=0.075  Sum_probs=147.8

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc---cccCCceeEEeccCCCHhHHHHHhc-------CCC
Q 023205           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR---DSWANNVIWHQGNLLSSDSWKEALD-------GVT  123 (286)
Q Consensus        54 ~~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~---~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d  123 (286)
                      ...|+++||||++.||+.+++.|+++|++|++.+|++.+...   +....++.++.+|++|+++++++++       .+|
T Consensus         3 L~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~iD   82 (247)
T d2ew8a1           3 LKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCD   82 (247)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCCC
Confidence            346899999999999999999999999999999998754322   2234578999999999998887764       589


Q ss_pred             EEEEccccCCC----------cchhhhhhhHHHHHHHHHHH----HcCCCEEEEEecCCcCCCCccccchHHHHHHHHHH
Q 023205          124 AVISCVGGFGS----------NSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEGKRAAETE  189 (286)
Q Consensus       124 ~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~----~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~  189 (286)
                      ++|||||....          +...+++|+.++..+.+++.    +.+-.++|++||.......+....|+.+|...+.+
T Consensus        83 ilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asKaal~~l  162 (247)
T d2ew8a1          83 ILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKAANIGF  162 (247)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCSSCHHHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchhcccCcccccchhhhccHHHH
Confidence            99999997531          23567899999988877663    44556899999964433444567899999999986


Q ss_pred             HHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHh
Q 023205          190 LLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAA  263 (286)
Q Consensus       190 ~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l  263 (286)
                      .+.      ..|++++.|.||.+..+.......      ....+   .......  |     ...+...+|+|++++.++
T Consensus       163 tk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~------~~~~~---~~~~~~~--~-----l~r~~~pedvA~~v~fL~  226 (247)
T d2ew8a1         163 TRALASDLGKDGITVNAIAPSLVRTATTEASAL------SAMFD---VLPNMLQ--A-----IPRLQVPLDLTGAAAFLA  226 (247)
T ss_dssp             HHHHHHHHGGGTEEEEEEEECCC---------------------------CTTS--S-----SCSCCCTHHHHHHHHHHT
T ss_pred             HHHHHHHhcccCeEEEEEeeCCCCCcccccccc------chhHH---HHHHHhc--c-----CCCCCCHHHHHHHHHHHh
Confidence            652      578999999999986553321100      00000   0000001  1     123567899999999998


Q ss_pred             cCC--CCCCCeeEecccc
Q 023205          264 TDP--VFPPGIVDVHGIL  279 (286)
Q Consensus       264 ~~~--~~~~~~~~l~~~~  279 (286)
                      .+.  ...|+++.+.|+-
T Consensus       227 S~~s~~itG~~i~vDGG~  244 (247)
T d2ew8a1         227 SDDASFITGQTLAVDGGM  244 (247)
T ss_dssp             SGGGTTCCSCEEEESSSC
T ss_pred             CchhcCCcCCeEEECCCE
Confidence            643  3578999998863

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=1.4e-21  Score=160.72  Aligned_cols=220  Identities=11%  Similarity=0.065  Sum_probs=156.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc------cc-cCCceeEEeccCCCHhHHHHHhc-------C
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DS-WANNVIWHQGNLLSSDSWKEALD-------G  121 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~------~~-~~~~~~~i~~Dl~d~~~~~~~~~-------~  121 (286)
                      .|++|||||++.||+++++.|+++|++|++.+|+.++...      +. ...++.++.+|++|+++++++++       .
T Consensus         3 GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~   82 (254)
T d2gdza1           3 GKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFGR   82 (254)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHcCC
Confidence            6899999999999999999999999999999998654211      11 13478899999999998887764       5


Q ss_pred             CCEEEEccccCC--CcchhhhhhhHHHHHHHHHHHH----cC---CCEEEEEecCCcCCCCccccchHHHHHHHHHHHH-
Q 023205          122 VTAVISCVGGFG--SNSYMYKINGTANINAIRAASE----KG---VKRFVYISAADFGVANYLLQGYYEGKRAAETELL-  191 (286)
Q Consensus       122 ~d~vi~~a~~~~--~~~~~~~~~~~~~~~l~~~a~~----~~---v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~-  191 (286)
                      +|++|||||...  ++...+++|+.++.++.+++.+    .+   -.+||++||...-...+....|+.+|...+.+.+ 
T Consensus        83 iDilVnnAg~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~ltrs  162 (254)
T d2gdza1          83 LDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRS  162 (254)
T ss_dssp             CCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHH
T ss_pred             cCeecccccccccccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhccCCCCccchHHHHHHHHHHHHH
Confidence            899999999864  4457789999988877776643    21   1369999996433333445679999999887643 


Q ss_pred             -------HhCCCcEEEEeeCeeecCCCCCccccC-ccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHh
Q 023205          192 -------TRYPYGGVILRPGFIYGTRTVGGMKLP-LGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAA  263 (286)
Q Consensus       192 -------~~~g~~~~ilRp~~v~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l  263 (286)
                             ...|++++.|.||.+-.+......... ........+.+...      +|.     ..+...+|+|++++.++
T Consensus       163 ~ala~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~------~p~-----~r~~~pedvA~~v~fL~  231 (254)
T d2gdza1         163 AALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDM------IKY-----YGILDPPLIANGLITLI  231 (254)
T ss_dssp             HHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHH------HHH-----HCCBCHHHHHHHHHHHH
T ss_pred             HHHHHHhcCCCEEEEEEEcCCCCChhhhhccccccccccHHHHHHHHhc------CCC-----CCCcCHHHHHHHHHHHH
Confidence                   257899999999988533211000000 00000111111111      111     23568899999999999


Q ss_pred             cCCCCCCCeeEecccccccccCC
Q 023205          264 TDPVFPPGIVDVHGILRYSQKSR  286 (286)
Q Consensus       264 ~~~~~~~~~~~l~~~~~~s~~~~  286 (286)
                      .++...|+++.+.|+..+.|+.+
T Consensus       232 s~~~itG~~i~VdGG~~~~~~~~  254 (254)
T d2gdza1         232 EDDALNGAIMKITTSKGIHFQDY  254 (254)
T ss_dssp             HCTTCSSCEEEEETTTEEEECCC
T ss_pred             cCCCCCCCEEEECCCCeeecccC
Confidence            88877899999999999888753

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.87  E-value=1.4e-20  Score=153.39  Aligned_cols=208  Identities=17%  Similarity=0.101  Sum_probs=150.8

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhc-------CCCEEEE
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD-------GVTAVIS  127 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d~vi~  127 (286)
                      ..|+++||||++.||+.+++.|+++|++|++.+|+.++........+.+++.+|++|+++++++++       .+|++||
T Consensus         4 ~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVn   83 (242)
T d1ulsa_           4 KDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRLDGVVH   83 (242)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHhcCCceEEEE
Confidence            468999999999999999999999999999999986553322223468899999999998887764       5899999


Q ss_pred             ccccCCC----------cchhhhhhhHHHHHHHHHHHH----cCCCEEEEEecCCcCCCCccccchHHHHHHHHHHHHH-
Q 023205          128 CVGGFGS----------NSYMYKINGTANINAIRAASE----KGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLT-  192 (286)
Q Consensus       128 ~a~~~~~----------~~~~~~~~~~~~~~l~~~a~~----~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~~-  192 (286)
                      |||....          +...+++|+.++..+.+++.+    .+-..++++||.. .........|+.+|...+.+.+. 
T Consensus        84 nAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss~~-~~~~~~~~~Y~asKaal~~ltk~l  162 (242)
T d1ulsa_          84 YAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRV-YLGNLGQANYAASMAGVVGLTRTL  162 (242)
T ss_dssp             CCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGG-GGCCTTCHHHHHHHHHHHHHHHHH
T ss_pred             CCcccccCchhhCcchhhhccccccchhhhhhhhhccccccccccceeeeecccc-ccCCCCCcchHHHHHHHHHHHHHH
Confidence            9986531          235678999999988887654    3344677777642 23334467899999999987653 


Q ss_pred             -----hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcC--
Q 023205          193 -----RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATD--  265 (286)
Q Consensus       193 -----~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~--  265 (286)
                           ..|++++.|.||.+-.+.....   +    ....+.+..      .+|+     ..+...+|+|+++..++.+  
T Consensus       163 A~ela~~gIrVN~I~PG~v~T~~~~~~---~----~~~~~~~~~------~~pl-----~R~~~pedia~~v~fL~S~~s  224 (242)
T d1ulsa_         163 ALELGRWGIRVNTLAPGFIETRMTAKV---P----EKVREKAIA------ATPL-----GRAGKPLEVAYAALFLLSDES  224 (242)
T ss_dssp             HHHHGGGTEEEEEEEECSBCCTTTSSS---C----HHHHHHHHH------TCTT-----CSCBCHHHHHHHHHHHHSGGG
T ss_pred             HHHHhhhCcEEEEEeeCcccChhhhcC---C----HHHHHHHHh------cCCC-----CCCCCHHHHHHHHHHHhchhh
Confidence                 5789999999999965543211   0    111111111      2232     2356899999999999964  


Q ss_pred             CCCCCCeeEecccccc
Q 023205          266 PVFPPGIVDVHGILRY  281 (286)
Q Consensus       266 ~~~~~~~~~l~~~~~~  281 (286)
                      ....|+++.+.|+..+
T Consensus       225 ~~itG~~i~vDGG~t~  240 (242)
T d1ulsa_         225 SFITGQVLFVDGGRTI  240 (242)
T ss_dssp             TTCCSCEEEESTTTTT
T ss_pred             CCCCCcEEEECCCccC
Confidence            3357899999987654

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=99.87  E-value=1.5e-21  Score=159.82  Aligned_cols=216  Identities=17%  Similarity=0.094  Sum_probs=151.9

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhc-------CCCEEEE
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD-------GVTAVIS  127 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d~vi~  127 (286)
                      ..|++|||||++.||+++++.|+++|++|++.+|+.+... .....+..++++|++|+++++++++       .+|++||
T Consensus         4 ~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~~-~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLVn   82 (248)
T d2d1ya1           4 AGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKE-VAEAIGGAFFQVDLEDERERVRFVEEAAYALGRVDVLVN   82 (248)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHH-HHHHHTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHcCCeEEEEeCCCHHHHHHHHHHHHHhcCCCCeEEE
Confidence            4789999999999999999999999999999999875421 1112256789999999988877664       5899999


Q ss_pred             ccccCCC----------cchhhhhhhHHHHHHHHHHHH----cCCCEEEEEecCCcCCCCccccchHHHHHHHHHHHHH-
Q 023205          128 CVGGFGS----------NSYMYKINGTANINAIRAASE----KGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLT-  192 (286)
Q Consensus       128 ~a~~~~~----------~~~~~~~~~~~~~~l~~~a~~----~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~~-  192 (286)
                      |||....          +...+++|+.++.++.+++..    .+-.+||++||............|+.+|...+.+.+. 
T Consensus        83 nAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaal~~ltk~l  162 (248)
T d2d1ya1          83 NAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGGLVNLTRSL  162 (248)
T ss_dssp             CCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCTTBHHHHHHHHHHHHHHHHH
T ss_pred             eCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccccccccccccccccccccccchhHHHHHHHHHHHHHH
Confidence            9986531          235678999999988887743    4445899999964333444567899999999986652 


Q ss_pred             -----hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcCC-
Q 023205          193 -----RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDP-  266 (286)
Q Consensus       193 -----~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~-  266 (286)
                           ..|++++.|.||.+-.+.........    ... +...+...  ...|+     ..+...+|+|+++..++.+. 
T Consensus       163 A~el~~~gIrVN~I~PG~v~T~~~~~~~~~~----~~~-~~~~~~~~--~~~pl-----~R~~~pedia~~v~fL~S~~s  230 (248)
T d2d1ya1         163 ALDLAPLRIRVNAVAPGAIATEAVLEAIALS----PDP-ERTRRDWE--DLHAL-----RRLGKPEEVAEAVLFLASEKA  230 (248)
T ss_dssp             HHHHGGGTEEEEEEEECSBCCHHHHHHHC-------------CHHHH--TTSTT-----SSCBCHHHHHHHHHHHHSGGG
T ss_pred             HHHhhhhCcEEEEEeeCCCCCchHHHHhhcC----CCH-HHHHHHHH--hcCCC-----CCCcCHHHHHHHHHHHhCchh
Confidence                 57899999999988543210000000    000 00000000  11222     24678999999999998643 


Q ss_pred             -CCCCCeeEecccccccc
Q 023205          267 -VFPPGIVDVHGILRYSQ  283 (286)
Q Consensus       267 -~~~~~~~~l~~~~~~s~  283 (286)
                       ...|+++.+.|+-.-+|
T Consensus       231 ~~itG~~i~vDGG~tas~  248 (248)
T d2d1ya1         231 SFITGAILPVDGGMTASF  248 (248)
T ss_dssp             TTCCSCEEEESTTGGGBC
T ss_pred             cCCCCcEEEcCcCccccC
Confidence             35789999999876665

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=99.86  E-value=9.8e-21  Score=155.23  Aligned_cols=202  Identities=15%  Similarity=0.169  Sum_probs=148.5

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc--cccCCceeEEeccCCCHhHHHHHhc-------CCCEE
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSWANNVIWHQGNLLSSDSWKEALD-------GVTAV  125 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~--~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d~v  125 (286)
                      ..|+++||||++.||++++++|+++|++|++.+|+.++...  +....++.++++|++|+++++++++       .+|++
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDil   83 (254)
T d1hdca_           4 SGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDGL   83 (254)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEcccCCHHHHHHHHHHHHHHcCCccEE
Confidence            47899999999999999999999999999999998755322  2223578999999999998887764       58999


Q ss_pred             EEccccCCC----------cchhhhhhhHHHHHHHHHHH----HcCCCEEEEEecCCcCCCCccccchHHHHHHHHHHHH
Q 023205          126 ISCVGGFGS----------NSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELL  191 (286)
Q Consensus       126 i~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~----~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~  191 (286)
                      |||||....          +...+++|+.++..+.+++.    +.+-.+||++||...-........|+.+|...+.+.+
T Consensus        84 VnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~~~~~~~~~~Y~asKaal~~lt~  163 (254)
T d1hdca_          84 VNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSK  163 (254)
T ss_dssp             EECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHH
T ss_pred             EecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchhcccccchhhHHHHHHHHHHHHH
Confidence            999986532          23567899999988877764    3455699999996433334456789999999998765


Q ss_pred             H------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhccc-----CCCCCCCCCccCCC-ccHHHHHHHH
Q 023205          192 T------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKP-----LSQLPLVGPLFTPP-VNVTVVAKVA  259 (286)
Q Consensus       192 ~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~g~~~~~~-i~v~Dva~~~  259 (286)
                      .      ..|+++++|.||.+..+..                  ......     ...+|+     ..+ +..+|+|+++
T Consensus       164 ~lA~e~a~~gIrVN~I~PG~v~T~~~------------------~~~~~~~~~~~~~~~pl-----~R~g~~PedvA~~v  220 (254)
T d1hdca_         164 LAAVELGTDRIRVNSVHPGMTYTPMT------------------AETGIRQGEGNYPNTPM-----GRVGNEPGEIAGAV  220 (254)
T ss_dssp             HHHHHHGGGTEEEEEEEECSBCCHHH------------------HHHTCCCSTTSCTTSTT-----SSCB-CHHHHHHHH
T ss_pred             HHHHHhCCCceEEEEeeeCcccCccc------------------hhcCHHHHHHHHhCCCC-----CCCCCCHHHHHHHH
Confidence            3      5789999999998853311                  111000     111221     122 3579999999


Q ss_pred             HHHhcCC--CCCCCeeEecccc
Q 023205          260 VRAATDP--VFPPGIVDVHGIL  279 (286)
Q Consensus       260 ~~~l~~~--~~~~~~~~l~~~~  279 (286)
                      +.++.+.  ...|+++.+.|+-
T Consensus       221 ~fL~S~~a~~itG~~i~vDGG~  242 (254)
T d1hdca_         221 VKLLSDTSSYVTGAELAVDGGW  242 (254)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTT
T ss_pred             HHHhchhhCCCCCceEEeCCCc
Confidence            9999643  3578999998874

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=99.86  E-value=1.5e-21  Score=160.69  Aligned_cols=217  Identities=13%  Similarity=0.090  Sum_probs=152.7

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCccc--ccccCCceeEEeccCCCHhHHHHHhc-------CCCEE
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSL--RDSWANNVIWHQGNLLSSDSWKEALD-------GVTAV  125 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~--~~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d~v  125 (286)
                      ..|+++||||++.||+++++.|+++|++|++.+|+.++..  .+....++..+.+|++|+++++++++       .+|++
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDil   83 (256)
T d1k2wa_           4 DGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPAACAIALDVTDQASIDRCVAELLDRWGSIDIL   83 (256)
T ss_dssp             TTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEeeCCCHHHHHHHHHHHHHHhCCccEE
Confidence            4689999999999999999999999999999999865421  12234678899999999998887764       58999


Q ss_pred             EEccccCCC----------cchhhhhhhHHHHHHHHHHHH----c-CCCEEEEEecCCcCCCCccccchHHHHHHHHHHH
Q 023205          126 ISCVGGFGS----------NSYMYKINGTANINAIRAASE----K-GVKRFVYISAADFGVANYLLQGYYEGKRAAETEL  190 (286)
Q Consensus       126 i~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~~----~-~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~  190 (286)
                      |||||....          +...+++|+.++..+.+++..    . .-.+||++||...-........|+.+|...+.+.
T Consensus        84 VnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~lt  163 (256)
T d1k2wa_          84 VNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRGEALVGVYCATKAAVISLT  163 (256)
T ss_dssp             EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHH
T ss_pred             EeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhccccccccchhhhhhHHHHHH
Confidence            999996531          235678999999888776432    2 2358999999643333445678999999999876


Q ss_pred             HH------hCCCcEEEEeeCeeecCCCCCcccc---Ccccc-CchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHH
Q 023205          191 LT------RYPYGGVILRPGFIYGTRTVGGMKL---PLGVI-GSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAV  260 (286)
Q Consensus       191 ~~------~~g~~~~ilRp~~v~g~~~~~~~~~---~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~  260 (286)
                      +.      ..|++++.|.||.+-.+........   ..... ....+.+.      ..+|+     ..+...+|+|++++
T Consensus       164 ~~lA~el~~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~Pl-----gR~~~p~evA~~v~  232 (256)
T d1k2wa_         164 QSAGLNLIRHGINVNAIAPGVVDGEHWDGVDAKFADYENLPRGEKKRQVG------AAVPF-----GRMGRAEDLTGMAI  232 (256)
T ss_dssp             HHHHHHHGGGTEEEEEEEECCBCCTTHHHHHHHHHHHHTCCTTHHHHHHH------HHSTT-----SSCBCHHHHHHHHH
T ss_pred             HHHHHHhcccCeEEEEEecCCCCchhhhhhhhhhhhhccCChHHHHHHHH------hcCCC-----CCCcCHHHHHHHHH
Confidence            52      5789999999998875532100000   00000 00000000      11222     34678999999999


Q ss_pred             HHhcCC--CCCCCeeEeccccccc
Q 023205          261 RAATDP--VFPPGIVDVHGILRYS  282 (286)
Q Consensus       261 ~~l~~~--~~~~~~~~l~~~~~~s  282 (286)
                      .++...  ...|+++.+.|+..+|
T Consensus       233 fL~S~~a~~iTG~~i~vDGG~~ms  256 (256)
T d1k2wa_         233 FLATPEADYIVAQTYNVDGGNWMS  256 (256)
T ss_dssp             HTTSGGGTTCCSCEEEESTTSSCC
T ss_pred             HHhCchhCCccCceEEECcchhhC
Confidence            988543  3578999999987654

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=99.86  E-value=1.2e-21  Score=159.85  Aligned_cols=208  Identities=17%  Similarity=0.094  Sum_probs=150.6

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc--cccCCceeEEeccCCCHhHHHHHhc-------CCCEE
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSWANNVIWHQGNLLSSDSWKEALD-------GVTAV  125 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~--~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d~v  125 (286)
                      ..|+++||||++.||+++++.|+++|++|++.+|++++...  +....+...+.+|++|+++++++++       .+|++
T Consensus         3 ~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDil   82 (243)
T d1q7ba_           3 EGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNVTDPASIESVLEKIRAEFGEVDIL   82 (243)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHTCSCSEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCCcEEEEEecCHHHhhhhhhhhhcccCCccee
Confidence            46899999999999999999999999999999998654211  2223578889999999988877764       58999


Q ss_pred             EEccccCCC----------cchhhhhhhHHHHHHHHHHH----HcCCCEEEEEecCCcCCCCccccchHHHHHHHHHHHH
Q 023205          126 ISCVGGFGS----------NSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELL  191 (286)
Q Consensus       126 i~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~----~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~  191 (286)
                      |||||....          +...+++|+.++..+.+++.    +.+-.+||++||............|+.+|...+.+.+
T Consensus        83 VnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~~~~Y~asKaal~~lt~  162 (243)
T d1q7ba_          83 VNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGLIGFSK  162 (243)
T ss_dssp             EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHHHHHHHHH
T ss_pred             hhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhhcCCCCCCHHHHHHHHHHHHHHH
Confidence            999986532          23567899999998887764    3445689999995322223345689999999998775


Q ss_pred             H------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcC
Q 023205          192 T------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATD  265 (286)
Q Consensus       192 ~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~  265 (286)
                      .      ..|++++.|.||.+-.+.....          ..+......   ..+|.     ..+...+|+|+++..++.+
T Consensus       163 ~lA~ela~~gIrVN~I~PG~i~T~~~~~~----------~~~~~~~~~---~~~pl-----~R~~~pedvA~~v~fL~S~  224 (243)
T d1q7ba_         163 SLAREVASRGITVNVVAPGFIETDMTRAL----------SDDQRAGIL---AQVPA-----GRLGGAQEIANAVAFLASD  224 (243)
T ss_dssp             HHHHHHGGGTEEEEEEEECSBCCHHHHTS----------CHHHHHHHH---TTCTT-----SSCBCHHHHHHHHHHHHSG
T ss_pred             HHHHHhCccCeEEEEEecceEechhhhhh----------hhhHHHHHH---hcCCC-----CCCCCHHHHHHHHHHHhCc
Confidence            3      5789999999998854321110          001111111   12332     2467899999999999964


Q ss_pred             CC--CCCCeeEeccccc
Q 023205          266 PV--FPPGIVDVHGILR  280 (286)
Q Consensus       266 ~~--~~~~~~~l~~~~~  280 (286)
                      ..  ..|+++.+.|+..
T Consensus       225 ~s~~itGq~i~vdGG~~  241 (243)
T d1q7ba_         225 EAAYITGETLHVNGGMY  241 (243)
T ss_dssp             GGTTCCSCEEEESTTSS
T ss_pred             hhcCCcCCeEEECCCeE
Confidence            33  5789999988743

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.86  E-value=6.3e-21  Score=156.40  Aligned_cols=207  Identities=17%  Similarity=0.111  Sum_probs=149.1

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc-----cccCCceeEEeccCCCHhHHHHHhc-------C
Q 023205           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------G  121 (286)
Q Consensus        54 ~~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~-----~~~~~~~~~i~~Dl~d~~~~~~~~~-------~  121 (286)
                      ...|+++||||++.||+++++.|+++|++|++.+|+.++...     .....++..+.+|++|+++++++++       .
T Consensus         8 lenKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~   87 (251)
T d2c07a1           8 GENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKN   87 (251)
T ss_dssp             CSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence            346899999999999999999999999999999998654211     1223478999999999998887764       5


Q ss_pred             CCEEEEccccCCC----------cchhhhhhhHHHHHHHHHHH----HcCCCEEEEEecCCcCCCCccccchHHHHHHHH
Q 023205          122 VTAVISCVGGFGS----------NSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEGKRAAE  187 (286)
Q Consensus       122 ~d~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~----~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E  187 (286)
                      +|++||||+....          +...+++|+.++..+.+++.    +.+-.+||++||...-........|+.+|...+
T Consensus        88 iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~~~~Y~asKaal~  167 (251)
T d2c07a1          88 VDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSSSKAGVI  167 (251)
T ss_dssp             CCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHHHH
T ss_pred             ceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHhcCCCCCCHHHHHHHHHHH
Confidence            8999999986531          23567899999888777653    445569999999532223334568999999999


Q ss_pred             HHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHH
Q 023205          188 TELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVR  261 (286)
Q Consensus       188 ~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~  261 (286)
                      .+.+.      ..|++++.|.||.+-.+.....           .+.......  ..+|+     ..+...+|+|++++.
T Consensus       168 ~ltr~lA~el~~~gIrVN~V~PG~v~T~~~~~~-----------~~~~~~~~~--~~~pl-----~R~~~pedvA~~v~f  229 (251)
T d2c07a1         168 GFTKSLAKELASRNITVNAIAPGFISSDMTDKI-----------SEQIKKNII--SNIPA-----GRMGTPEEVANLACF  229 (251)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECSBCC-----C-----------CHHHHHHHH--TTCTT-----SSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHhhhhCeEEEEEccCCEeccccccc-----------CHHHHHHHH--hcCCC-----CCCcCHHHHHHHHHH
Confidence            87753      5789999999999965533211           011111111  12332     236789999999999


Q ss_pred             HhcCCC--CCCCeeEeccc
Q 023205          262 AATDPV--FPPGIVDVHGI  278 (286)
Q Consensus       262 ~l~~~~--~~~~~~~l~~~  278 (286)
                      ++.+..  ..|+++.+.|+
T Consensus       230 L~S~~s~~itG~~i~vDGG  248 (251)
T d2c07a1         230 LSSDKSGYINGRVFVIDGG  248 (251)
T ss_dssp             HHSGGGTTCCSCEEEESTT
T ss_pred             HhCchhCCCcCcEEEECCC
Confidence            986433  56899999886

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.86  E-value=4.9e-21  Score=157.01  Aligned_cols=209  Identities=17%  Similarity=0.151  Sum_probs=151.4

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc------cccCCceeEEeccCCCHhHHHHHhc-------C
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD-------G  121 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~------~~~~~~~~~i~~Dl~d~~~~~~~~~-------~  121 (286)
                      ..|+++||||++.||+.+++.|+++|++|++.+|+.++...      +....++.++.+|++|+++++++++       .
T Consensus         4 ~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   83 (251)
T d1vl8a_           4 RGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFGK   83 (251)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            46899999999999999999999999999999998654211      2224578889999999998887764       5


Q ss_pred             CCEEEEccccCCC----------cchhhhhhhHHHHHHHHHHHH----cCCCEEEEEecCCcCCC-CccccchHHHHHHH
Q 023205          122 VTAVISCVGGFGS----------NSYMYKINGTANINAIRAASE----KGVKRFVYISAADFGVA-NYLLQGYYEGKRAA  186 (286)
Q Consensus       122 ~d~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~~----~~v~~~v~~Ss~~~~~~-~~~~~~y~~sK~~~  186 (286)
                      +|++|||||....          +...+++|+.++..+.+.+..    .+-.++|++||...... ......|+.+|...
T Consensus        84 iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~~~~~~~~~~Y~asKaal  163 (251)
T d1vl8a_          84 LDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAASKGGV  163 (251)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCSSSCHHHHHHHHHH
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchhccccCccccchHHHHHhH
Confidence            8999999986531          235678999999988887654    34458999998543332 33456899999999


Q ss_pred             HHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHH
Q 023205          187 ETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAV  260 (286)
Q Consensus       187 E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~  260 (286)
                      +.+.+.      ..|++++.|.||.+-.+......       .. .+.......   .+|+     ..+..++|+|++++
T Consensus       164 ~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~~~~~-------~~-~~~~~~~~~---~~pl-----~R~~~pedvA~~v~  227 (251)
T d1vl8a_         164 ASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVF-------SD-PEKLDYMLK---RIPL-----GRTGVPEDLKGVAV  227 (251)
T ss_dssp             HHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHH-------TC-HHHHHHHHH---TCTT-----SSCBCGGGGHHHHH
T ss_pred             HHHHHHHHHHhcccCeEEEEEeeCcccCHHHHhcc-------CC-HHHHHHHHh---cCCC-----CCCCCHHHHHHHHH
Confidence            987653      57899999999999755432111       00 111111111   2232     23568899999999


Q ss_pred             HHhcCC--CCCCCeeEecccc
Q 023205          261 RAATDP--VFPPGIVDVHGIL  279 (286)
Q Consensus       261 ~~l~~~--~~~~~~~~l~~~~  279 (286)
                      .++...  ...|+++.+.|+-
T Consensus       228 fL~S~~a~~itG~~i~vDGG~  248 (251)
T d1vl8a_         228 FLASEEAKYVTGQIIFVDGGW  248 (251)
T ss_dssp             HHHSGGGTTCCSCEEEESTTG
T ss_pred             HHhCchhCCCcCcEEEeCcCe
Confidence            998643  3578999998874

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=99.86  E-value=1e-20  Score=155.88  Aligned_cols=211  Identities=14%  Similarity=0.072  Sum_probs=151.6

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc------cccCCceeEEeccCCCHhHHHHHhc-------C
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD-------G  121 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~------~~~~~~~~~i~~Dl~d~~~~~~~~~-------~  121 (286)
                      ..|+++||||++.||++++++|+++|++|++..|+.++...      .....++.++++|++|+++++++++       .
T Consensus         6 ~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~   85 (261)
T d1geea_           6 EGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGK   85 (261)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            46899999999999999999999999999999998654221      1223578899999999998887764       5


Q ss_pred             CCEEEEccccCCC----------cchhhhhhhHHHHHHHHHHH----HcCC-CEEEEEecCCcCCCCccccchHHHHHHH
Q 023205          122 VTAVISCVGGFGS----------NSYMYKINGTANINAIRAAS----EKGV-KRFVYISAADFGVANYLLQGYYEGKRAA  186 (286)
Q Consensus       122 ~d~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~----~~~v-~~~v~~Ss~~~~~~~~~~~~y~~sK~~~  186 (286)
                      +|++|||||....          +...+++|+.++..+.+++.    +.+. .+||++||.......+....|+.+|...
T Consensus        86 iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~~~~~~~~Y~asKaal  165 (261)
T d1geea_          86 LDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGM  165 (261)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHHHHHHHHH
T ss_pred             CCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhcccCccccccccCCccc
Confidence            8999999987532          23567899999988877653    3443 3588899854333334456899999999


Q ss_pred             HHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHH
Q 023205          187 ETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAV  260 (286)
Q Consensus       187 E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~  260 (286)
                      +.+.+.      ..|+++++|.||.+..+......       .. .+..... .  ..+|+     ..+..++|+|++++
T Consensus       166 ~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~-------~~-~~~~~~~-~--~~~pl-----~R~~~pediA~~v~  229 (261)
T d1geea_         166 KLMTETLALEYAPKGIRVNNIGPGAINTPINAEKF-------AD-PEQRADV-E--SMIPM-----GYIGEPEEIAAVAA  229 (261)
T ss_dssp             HHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHH-------HS-HHHHHHH-H--TTCTT-----SSCBCHHHHHHHHH
T ss_pred             hhhHHHHHHHhhhhCcEEEEEeeCcCcCHhHhhhc-------CC-HHHHHHH-H--hcCCC-----CCCCCHHHHHHHHH
Confidence            987653      57899999999998644321100       00 0111111 1  12332     23578899999999


Q ss_pred             HHhcCC--CCCCCeeEecccccc
Q 023205          261 RAATDP--VFPPGIVDVHGILRY  281 (286)
Q Consensus       261 ~~l~~~--~~~~~~~~l~~~~~~  281 (286)
                      .++...  ...|+++.+.|+..+
T Consensus       230 fL~S~~s~~itG~~i~vDGG~sl  252 (261)
T d1geea_         230 WLASSEASYVTGITLFADGGMTL  252 (261)
T ss_dssp             HHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHhCchhcCCcCCeEEECCCeeC
Confidence            999643  357899999998765

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=6.8e-21  Score=155.53  Aligned_cols=211  Identities=14%  Similarity=0.030  Sum_probs=151.9

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc-cccCCceeEEeccCCCHhHHHHHhc---CCCEEEEcc
Q 023205           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-DSWANNVIWHQGNLLSSDSWKEALD---GVTAVISCV  129 (286)
Q Consensus        54 ~~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~-~~~~~~~~~i~~Dl~d~~~~~~~~~---~~d~vi~~a  129 (286)
                      ...|++|||||++.||+++++.|+++|++|++.+|+.++... .....++..+.+|++|+++++++++   .+|++||||
T Consensus         5 L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~g~iDilVnnA   84 (244)
T d1pr9a_           5 LAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSVGPVDLLVNNA   84 (244)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCCEEEECC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHHhCCceEEEecc
Confidence            347899999999999999999999999999999998654221 1113478899999999999998886   479999999


Q ss_pred             ccCCC----------cchhhhhhhHHHHHHHHHHHH-----cCCCEEEEEecCCcCCCCccccchHHHHHHHHHHHHH--
Q 023205          130 GGFGS----------NSYMYKINGTANINAIRAASE-----KGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLT--  192 (286)
Q Consensus       130 ~~~~~----------~~~~~~~~~~~~~~l~~~a~~-----~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~~--  192 (286)
                      |....          +...+++|+.++..+.+.+.+     .+..++|++||.......+....|+.+|...+.+.+.  
T Consensus        85 g~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA  164 (244)
T d1pr9a_          85 AVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMA  164 (244)
T ss_dssp             CCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHH
T ss_pred             ccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeecccccccccccchhhhhhhHHHHHHHHHHHH
Confidence            86532          235678999998877776532     2345899999964333344456899999999987653  


Q ss_pred             ----hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcCC--
Q 023205          193 ----RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDP--  266 (286)
Q Consensus       193 ----~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~--  266 (286)
                          ..|++++.|.||.+..+.....+       .. .+......   ..+|+     ..+...+|+|+++..++.+.  
T Consensus       165 ~el~~~gIrvN~I~PG~v~T~~~~~~~-------~~-~~~~~~~~---~~~pl-----~R~~~peevA~~v~fL~S~~a~  228 (244)
T d1pr9a_         165 LELGPHKIRVNAVNPTVVMTSMGQATW-------SD-PHKAKTML---NRIPL-----GKFAEVEHVVNAILFLLSDRSG  228 (244)
T ss_dssp             HHHGGGTEEEEEEEECCBCSHHHHTTS-------CS-HHHHHHHH---TTCTT-----CSCBCHHHHHHHHHHHHSGGGT
T ss_pred             HHhCCCcEEEEEEeeCcCcChHHhhhc-------cC-hHHHHHHH---hcCCC-----CCCcCHHHHHHHHHHHhCchhC
Confidence                57899999999998654321110       01 11111111   12333     24678999999999998643  


Q ss_pred             CCCCCeeEeccccc
Q 023205          267 VFPPGIVDVHGILR  280 (286)
Q Consensus       267 ~~~~~~~~l~~~~~  280 (286)
                      ...|+++.+.|+-.
T Consensus       229 ~itG~~i~vDGG~~  242 (244)
T d1pr9a_         229 MTTGSTLPVEGGFW  242 (244)
T ss_dssp             TCCSCEEEESTTGG
T ss_pred             CcCCcEEEECccHh
Confidence            35789999988753

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=99.85  E-value=1.6e-20  Score=154.45  Aligned_cols=218  Identities=14%  Similarity=0.088  Sum_probs=152.5

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc-------cccCCceeEEeccCCCHhHHHHHhc-------
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-------DSWANNVIWHQGNLLSSDSWKEALD-------  120 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~-------  120 (286)
                      ..|+++||||++.||+.+++.|+++|++|++.+|+.++...       .....++..+.+|++|+++++++++       
T Consensus         3 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~G   82 (258)
T d1iy8a_           3 TDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFG   82 (258)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHHhC
Confidence            36899999999999999999999999999999998654211       1123478889999999998887764       


Q ss_pred             CCCEEEEccccCC-----------CcchhhhhhhHHHHHHHHHHH----HcCCCEEEEEecCCcCCCCccccchHHHHHH
Q 023205          121 GVTAVISCVGGFG-----------SNSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEGKRA  185 (286)
Q Consensus       121 ~~d~vi~~a~~~~-----------~~~~~~~~~~~~~~~l~~~a~----~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~  185 (286)
                      .+|++|||||...           .+...+++|+.++..+.+++.    +.+-.+||++||...-...+....|+.+|..
T Consensus        83 ~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaa  162 (258)
T d1iy8a_          83 RIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAKHG  162 (258)
T ss_dssp             CCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCSSBHHHHHHHHH
T ss_pred             CCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhhccCCCCchHHHHHHHH
Confidence            5899999998542           123567899999998887663    3455689999995433334456789999999


Q ss_pred             HHHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHH
Q 023205          186 AETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVA  259 (286)
Q Consensus       186 ~E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~  259 (286)
                      .+.+.+.      ..|++++.|.||.+..+.....+...  ......+......   ..+|+     ..+...+|+|+++
T Consensus       163 l~~lt~~lA~el~~~gIrVN~i~PG~v~T~~~~~~~~~~--~~~~~~~~~~~~~---~~~pl-----~R~~~p~dvA~~v  232 (258)
T d1iy8a_         163 VVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQL--DPENPRKAAEEFI---QVNPS-----KRYGEAPEIAAVV  232 (258)
T ss_dssp             HHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHH--CTTCHHHHHHHHH---TTCTT-----CSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHhCccCceEEEEeeCcccCHHHHHHHhhc--CcccHHHHHHHHH---hcCCC-----CCCcCHHHHHHHH
Confidence            9986642      57899999999998643211000000  0000111111111   12222     2467899999999


Q ss_pred             HHHhcC--CCCCCCeeEeccccccc
Q 023205          260 VRAATD--PVFPPGIVDVHGILRYS  282 (286)
Q Consensus       260 ~~~l~~--~~~~~~~~~l~~~~~~s  282 (286)
                      +.++..  ....|+++.+.|+..-+
T Consensus       233 ~fL~S~~s~~itG~~i~VDGG~saa  257 (258)
T d1iy8a_         233 AFLLSDDASYVNATVVPIDGGQSAA  257 (258)
T ss_dssp             HHHTSGGGTTCCSCEEEESTTTTTB
T ss_pred             HHHhCchhcCCcCceEEcCcchhcc
Confidence            999964  33578999999987654

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=6e-21  Score=156.23  Aligned_cols=216  Identities=15%  Similarity=0.112  Sum_probs=151.4

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc-cccCCceeEEeccCCCHhHHHHHhc-------CCCEE
Q 023205           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-DSWANNVIWHQGNLLSSDSWKEALD-------GVTAV  125 (286)
Q Consensus        54 ~~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~-~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d~v  125 (286)
                      ...|+++||||++.||+++++.|+++|++|++.+|+.+.... .....++.++.+|++|+++++++++       .+|++
T Consensus         4 l~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDil   83 (250)
T d1ydea1           4 YAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCV   83 (250)
T ss_dssp             TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcCCCeEEEccCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            347899999999999999999999999999999998654211 1123578899999999998887764       58999


Q ss_pred             EEccccCCC-----------cchhhhhhhHHHHHHHHHHH----HcCCCEEEEEecCCcCCCCccccchHHHHHHHHHHH
Q 023205          126 ISCVGGFGS-----------NSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEGKRAAETEL  190 (286)
Q Consensus       126 i~~a~~~~~-----------~~~~~~~~~~~~~~l~~~a~----~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~  190 (286)
                      |||||....           +...+++|+.++..+.+++.    +.+ .++|++||............|+.+|...+.+.
T Consensus        84 VnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~-G~Ii~isS~~~~~~~~~~~~Y~asKaal~~lt  162 (250)
T d1ydea1          84 VNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQ-GNVINISSLVGAIGQAQAVPYVATKGAVTAMT  162 (250)
T ss_dssp             EECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCHHHHHCCTTCHHHHHHHHHHHHHH
T ss_pred             EecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCC-CCCcccccccccccccCcchhHHHHhhHHHHH
Confidence            999985421           23557899999988877664    333 58999999532223344568999999999876


Q ss_pred             HH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhc
Q 023205          191 LT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAAT  264 (286)
Q Consensus       191 ~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~  264 (286)
                      +.      ..|++++.|.||.+..+.....    ........+.+.....   ..|+     ..+...+|+|++++.++.
T Consensus       163 ~~lA~e~a~~gIrVN~I~PG~i~T~~~~~~----~~~~~~~~~~~~~~~~---~~pl-----~R~g~p~eva~~v~fL~S  230 (250)
T d1ydea1         163 KALALDESPYGVRVNCISPGNIWTPLWEEL----AALMPDPRASIREGML---AQPL-----GRMGQPAEVGAAAVFLAS  230 (250)
T ss_dssp             HHHHHHHGGGTCEEEEEEECSBCCHHHHHH----HTTSSSHHHHHHHHHH---TSTT-----SSCBCHHHHHHHHHHHHH
T ss_pred             HHHHHHhcccCeEEEEEeeCCCCChhHHHH----hhcCCCHHHHHHHHHh---cCCC-----CCCCCHHHHHHHHHHHhC
Confidence            52      5789999999999853321000    0000111122222211   1222     246789999999999885


Q ss_pred             C-CCCCCCeeEeccccccc
Q 023205          265 D-PVFPPGIVDVHGILRYS  282 (286)
Q Consensus       265 ~-~~~~~~~~~l~~~~~~s  282 (286)
                      + ....|+++.+.|+..+.
T Consensus       231 da~~itG~~i~vDGG~~lG  249 (250)
T d1ydea1         231 EANFCTGIELLVTGGAELG  249 (250)
T ss_dssp             HCTTCCSCEEEESTTTTSC
T ss_pred             ccCCCcCCeEEECCCcccC
Confidence            3 23478999999886553

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.85  E-value=1.4e-20  Score=154.90  Aligned_cols=211  Identities=14%  Similarity=0.086  Sum_probs=140.9

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc-----cccCCceeEEeccCCCHhHHHHHhc--------
Q 023205           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD--------  120 (286)
Q Consensus        54 ~~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~-----~~~~~~~~~i~~Dl~d~~~~~~~~~--------  120 (286)
                      ...|+++||||++.||..+++.|+++|++|++.+|+.++...     .....++..+.+|++|+++++++++        
T Consensus         6 LkgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g   85 (259)
T d1xq1a_           6 LKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGG   85 (259)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTT
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHHhCC
Confidence            457899999999999999999999999999999998654211     1123478999999999988776653        


Q ss_pred             CCCEEEEccccCC----------CcchhhhhhhHHHHHHHHHHH----HcCCCEEEEEecCCcCCCCccccchHHHHHHH
Q 023205          121 GVTAVISCVGGFG----------SNSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEGKRAA  186 (286)
Q Consensus       121 ~~d~vi~~a~~~~----------~~~~~~~~~~~~~~~l~~~a~----~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~  186 (286)
                      .+|++|||||...          .+...+++|+.++..+.+++.    +.+-.+||++||............|+.+|...
T Consensus        86 ~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asKaal  165 (259)
T d1xq1a_          86 KLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGAL  165 (259)
T ss_dssp             CCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC----------CCHHHHHHHHH
T ss_pred             CcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhcccccccccccccccccccccccccccccccccch
Confidence            3799999998653          124567899999988877664    34556999999964333334456799999999


Q ss_pred             HHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHH
Q 023205          187 ETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAV  260 (286)
Q Consensus       187 E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~  260 (286)
                      +.+.+.      ..|+++++|.||.+-.+......       .   +......  ...+|+     ..+...+|+|++++
T Consensus       166 ~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~~~~~~-------~---~~~~~~~--~~~~pl-----~R~~~pedvA~~v~  228 (259)
T d1xq1a_         166 NQLARNLACEWASDGIRANAVAPAVIATPLAEAVY-------D---DEFKKVV--ISRKPL-----GRFGEPEEVSSLVA  228 (259)
T ss_dssp             HHHHHHHHHHHGGGTCEEEEEECCSCC------------------------------------------CCGGGGHHHHH
T ss_pred             hhhhHHHHHHhcccCeEEEEeccCcccCHHhhhhc-------h---HHHHHHH--HhCCCC-----CCCcCHHHHHHHHH
Confidence            986653      57899999999998654322110       0   0000000  111222     23568899999999


Q ss_pred             HHhcC--CCCCCCeeEecccccc
Q 023205          261 RAATD--PVFPPGIVDVHGILRY  281 (286)
Q Consensus       261 ~~l~~--~~~~~~~~~l~~~~~~  281 (286)
                      .++.+  ....|+++.+.|+..+
T Consensus       229 fL~S~~s~~iTG~~i~vDGG~s~  251 (259)
T d1xq1a_         229 FLCMPAASYITGQTICVDGGLTV  251 (259)
T ss_dssp             HHTSGGGTTCCSCEEECCCCEEE
T ss_pred             HHhCchhcCCcCcEEEeCCCEEC
Confidence            99854  3357899999998654

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=99.85  E-value=1.5e-20  Score=155.13  Aligned_cols=218  Identities=15%  Similarity=0.127  Sum_probs=148.1

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc-------cccCCceeEEeccCCCHhHHHHHhc-------
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-------DSWANNVIWHQGNLLSSDSWKEALD-------  120 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~-------  120 (286)
                      ..|++|||||++.||++++++|+++|++|++..|+..+...       .....++.++.+|++|+++++++++       
T Consensus         3 ~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G   82 (260)
T d1x1ta1           3 KGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMG   82 (260)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHS
T ss_pred             CcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            46799999999999999999999999999999998643211       1224578899999999998887764       


Q ss_pred             CCCEEEEccccCCC----------cchhhhhhhHHHHHHHHHH----HHcCCCEEEEEecCCcCCCCccccchHHHHHHH
Q 023205          121 GVTAVISCVGGFGS----------NSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKRAA  186 (286)
Q Consensus       121 ~~d~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a----~~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~  186 (286)
                      .+|++|||||....          +...+++|+.++..+.+++    ++.+-.++|++||...-...+....|+.+|...
T Consensus        83 ~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asKaal  162 (260)
T d1x1ta1          83 RIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGV  162 (260)
T ss_dssp             CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHHH
T ss_pred             CCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccccceeccCCcchhhhhhhhH
Confidence            58999999996531          2356789999988777765    344556999999964333334456799999999


Q ss_pred             HHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccC-chHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHH
Q 023205          187 ETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIG-SPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVA  259 (286)
Q Consensus       187 E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~  259 (286)
                      +.+.+.      ..|++++.|.||.+-.+.............+ ...+......  ...+|.     ..+...+|+|+++
T Consensus       163 ~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~Pl-----~R~g~pediA~~v  235 (260)
T d1x1ta1         163 VGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELL--SEKQPS-----LQFVTPEQLGGTA  235 (260)
T ss_dssp             HHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CH--HHHCTT-----CCCBCHHHHHHHH
T ss_pred             HHhHHHHHHHhchhCcEEEEEecCCCCChhhhhhhhhhhhhcCCChHHHHHHHH--HhcCCC-----CCCcCHHHHHHHH
Confidence            986653      5789999999999865432211000000000 0000000000  011222     2467899999999


Q ss_pred             HHHhcCC--CCCCCeeEecccc
Q 023205          260 VRAATDP--VFPPGIVDVHGIL  279 (286)
Q Consensus       260 ~~~l~~~--~~~~~~~~l~~~~  279 (286)
                      +.++.+.  ...|+++.+.|+-
T Consensus       236 ~fL~S~~a~~itG~~i~vDGG~  257 (260)
T d1x1ta1         236 VFLASDAAAQITGTTVSVDGGW  257 (260)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHhChhhCCCcCCEEEECcch
Confidence            9999643  3578999999873

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=99.85  E-value=2.1e-20  Score=153.48  Aligned_cols=208  Identities=15%  Similarity=0.125  Sum_probs=150.6

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc-----cccCCceeEEeccCCCHhHHHHHhc-------CC
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------GV  122 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~-----~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~  122 (286)
                      ..|+++||||++.||+++++.|+++|++|++.+|+.++...     .....++.++++|++|+++++++++       .+
T Consensus        10 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~~g~i   89 (255)
T d1fmca_          10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGKV   89 (255)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            46899999999999999999999999999999998654211     1123578899999999988877664       58


Q ss_pred             CEEEEccccCCC---------cchhhhhhhHHHHHHHHHHH----HcCCCEEEEEecCCcCCCCccccchHHHHHHHHHH
Q 023205          123 TAVISCVGGFGS---------NSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEGKRAAETE  189 (286)
Q Consensus       123 d~vi~~a~~~~~---------~~~~~~~~~~~~~~l~~~a~----~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~  189 (286)
                      |++|||||....         +...+++|+.++..+.+.+.    +.+-.++|++||............|+.+|...+.+
T Consensus        90 DilvnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~isS~~~~~~~~~~~~Y~asKaal~~l  169 (255)
T d1fmca_          90 DILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHL  169 (255)
T ss_dssp             CEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHHHHHHHH
T ss_pred             CEeeeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccccchhccccccccchhHHHHHHHH
Confidence            999999986532         23567899999988877664    34445899999954333444567899999999987


Q ss_pred             HHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHh
Q 023205          190 LLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAA  263 (286)
Q Consensus       190 ~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l  263 (286)
                      .+.      ..|+++++|.||.+..+.....+  +    ....+.+..      .+|+     ..+..++|+|++++.++
T Consensus       170 t~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~--~----~e~~~~~~~------~~pl-----~R~g~pedvA~~v~fL~  232 (255)
T d1fmca_         170 VRNMAFDLGEKNIRVNGIAPGAILTDALKSVI--T----PEIEQKMLQ------HTPI-----RRLGQPQDIANAALFLC  232 (255)
T ss_dssp             HHHHHHHHHTTTEEEEEEEECSBCSHHHHTTC--C----HHHHHHHHH------TCSS-----CSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHhCccCeEEEEeeeCcCcChHhhccC--C----HHHHHHHHh------cCCC-----CCCcCHHHHHHHHHHHh
Confidence            653      57899999999998643221110  0    111111111      2232     23578899999999998


Q ss_pred             cCC--CCCCCeeEecccc
Q 023205          264 TDP--VFPPGIVDVHGIL  279 (286)
Q Consensus       264 ~~~--~~~~~~~~l~~~~  279 (286)
                      ...  ...|+++.+.|+.
T Consensus       233 S~~s~~itG~~i~vDGG~  250 (255)
T d1fmca_         233 SPAASWVSGQILTVSGGG  250 (255)
T ss_dssp             SGGGTTCCSCEEEESTTS
T ss_pred             CchhcCCcCCEEEECcCc
Confidence            643  3578999999875

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=99.85  E-value=7.9e-20  Score=151.32  Aligned_cols=215  Identities=12%  Similarity=0.060  Sum_probs=151.1

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc---c-ccCCceeEEeccCCCHhHHHHHhc-------CC
Q 023205           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR---D-SWANNVIWHQGNLLSSDSWKEALD-------GV  122 (286)
Q Consensus        54 ~~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~---~-~~~~~~~~i~~Dl~d~~~~~~~~~-------~~  122 (286)
                      ...|++|||||++.||..++++|+++|++|++.+|+.++...   + .....+.++.+|++|+++++++++       .+
T Consensus         4 L~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   83 (268)
T d2bgka1           4 LQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKL   83 (268)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCCceEEEEccCCCHHHHHHHHHHHHHHcCCc
Confidence            357899999999999999999999999999999998654211   1 123468889999999998887764       58


Q ss_pred             CEEEEccccCCC------------cchhhhhhhHHHHHHHHHHHH----cCCCEEEEEecCCcCCCCcc-ccchHHHHHH
Q 023205          123 TAVISCVGGFGS------------NSYMYKINGTANINAIRAASE----KGVKRFVYISAADFGVANYL-LQGYYEGKRA  185 (286)
Q Consensus       123 d~vi~~a~~~~~------------~~~~~~~~~~~~~~l~~~a~~----~~v~~~v~~Ss~~~~~~~~~-~~~y~~sK~~  185 (286)
                      |++|||||....            +...+++|+.++..+.+++.+    .+-.++|++||........+ ...|+.+|..
T Consensus        84 D~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~~Y~asKaa  163 (268)
T d2bgka1          84 DIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTATKHA  163 (268)
T ss_dssp             CEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTTSCHHHHHHHHH
T ss_pred             ceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCccccccccccccccccccccchhHHH
Confidence            999999986421            124568999999888877643    34458999998532222222 3479999999


Q ss_pred             HHHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHH
Q 023205          186 AETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVA  259 (286)
Q Consensus       186 ~E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~  259 (286)
                      .+.+.+.      ..|++++.|.||.+-.+.....+.       ...+......... ..|     ...+...+|+|+++
T Consensus       164 l~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~-------~~~~~~~~~~~~~-~~~-----~gr~~~pedvA~~v  230 (268)
T d2bgka1         164 VLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFG-------VDSSRVEELAHQA-ANL-----KGTLLRAEDVADAV  230 (268)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSS-------CCHHHHHHHHHHT-CSS-----CSCCCCHHHHHHHH
T ss_pred             HHhCHHHHHHHhChhCeEEEecCCCCccChHHhhhhc-------CCHHHHHHHHHhc-ccc-----CCCCcCHHHHHHHH
Confidence            9987653      578999999999997664332211       1111111111100 111     12457899999999


Q ss_pred             HHHhcCC--CCCCCeeEecccccc
Q 023205          260 VRAATDP--VFPPGIVDVHGILRY  281 (286)
Q Consensus       260 ~~~l~~~--~~~~~~~~l~~~~~~  281 (286)
                      +.++.+.  ...|+++.+.|+-..
T Consensus       231 ~fL~S~~s~~itGq~i~VDGG~t~  254 (268)
T d2bgka1         231 AYLAGDESKYVSGLNLVIDGGYTR  254 (268)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHhChhhCCccCceEEECcCccc
Confidence            9999643  357899999987544

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=99.85  E-value=9.2e-21  Score=156.07  Aligned_cols=215  Identities=17%  Similarity=0.091  Sum_probs=149.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc-----cccCCceeEEeccCCCHhHHHHHhc-------CCC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------GVT  123 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~-----~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d  123 (286)
                      .|.+|||||++.||+++++.|+++|++|++.+|+.++...     .....++.++++|++|+++++++++       .+|
T Consensus         2 gKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iD   81 (257)
T d2rhca1           2 SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVD   81 (257)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSCS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence            4678999999999999999999999999999998654211     1223578899999999998887764       589


Q ss_pred             EEEEccccCCC----------cchhhhhhhHHHHHHHHHHHH------cCCCEEEEEecCCcCCCCccccchHHHHHHHH
Q 023205          124 AVISCVGGFGS----------NSYMYKINGTANINAIRAASE------KGVKRFVYISAADFGVANYLLQGYYEGKRAAE  187 (286)
Q Consensus       124 ~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~~------~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E  187 (286)
                      ++|||||....          +...+++|+.++..+.+++.+      .+..++|++||.......+....|+.+|...+
T Consensus        82 ilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~~~~~~~~~Y~asKaal~  161 (257)
T d2rhca1          82 VLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVV  161 (257)
T ss_dssp             EEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGTSCCTTCHHHHHHHHHHH
T ss_pred             EEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCcccccccccccccccccchhHHHHHHHHH
Confidence            99999986531          235678999999999988753      34458999998543333445678999999999


Q ss_pred             HHHHH------hCCCcEEEEeeCeeecCCCCCccccCcc-ccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHH
Q 023205          188 TELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLG-VIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAV  260 (286)
Q Consensus       188 ~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~  260 (286)
                      .+.+.      ..|++++.|.||.+-.+........... +-....+.+....   ..+|+     ..+...+|+|++++
T Consensus       162 ~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~e~~~~~~---~~~Pl-----gR~~~pedia~~v~  233 (257)
T d2rhca1         162 GFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRIT---ARVPI-----GRYVQPSEVAEMVA  233 (257)
T ss_dssp             HHHHHHHHHTTTSEEEEEEEEECSBCSHHHHHHHHHHHHHTTCCHHHHHHHHH---TTSTT-----SSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHhhhhCcEEEEEeeCCCCCHHHHHHHhhhhhhcccChHHHHHHHH---hcCCC-----CCCcCHHHHHHHHH
Confidence            87753      5689999999999853321000000000 0000111111111   12333     24678999999999


Q ss_pred             HHhcC--CCCCCCeeEeccc
Q 023205          261 RAATD--PVFPPGIVDVHGI  278 (286)
Q Consensus       261 ~~l~~--~~~~~~~~~l~~~  278 (286)
                      .++..  ....|+++.+.|+
T Consensus       234 fL~S~~s~~itG~~i~vDGG  253 (257)
T d2rhca1         234 YLIGPGAAAVTAQALNVCGG  253 (257)
T ss_dssp             HHTSGGGTTCCSCEEEESTT
T ss_pred             HHhCchhcCCcCceEEECcC
Confidence            99954  3357899999886

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=99.85  E-value=9.3e-21  Score=155.83  Aligned_cols=216  Identities=17%  Similarity=0.095  Sum_probs=147.2

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc-----cccCCceeEEeccCCCHhHHHHHhc-------CCCE
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------GVTA  124 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~-----~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d~  124 (286)
                      |.+|||||++.||++++++|+++|++|++.+|++++...     .....++.++++|++|+++++++++       .+|+
T Consensus         2 KValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   81 (255)
T d1gega_           2 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDV   81 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCE
T ss_pred             CEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCccE
Confidence            456999999999999999999999999999998654211     1123578899999999998887764       5899


Q ss_pred             EEEccccCCC----------cchhhhhhhHHHHHHHHHHH----HcC-CCEEEEEecCCcCCCCccccchHHHHHHHHHH
Q 023205          125 VISCVGGFGS----------NSYMYKINGTANINAIRAAS----EKG-VKRFVYISAADFGVANYLLQGYYEGKRAAETE  189 (286)
Q Consensus       125 vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~----~~~-v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~  189 (286)
                      +|||||....          +...+++|+.++..+.+++.    +.+ -.++|++||...-...+....|+.+|...+.+
T Consensus        82 lVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~l  161 (255)
T d1gega_          82 IVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRGL  161 (255)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHH
T ss_pred             EEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhcccCcccccchhCHHHHHhh
Confidence            9999986531          23567899999998887753    233 34799999854333344567799999999987


Q ss_pred             HHH------hCCCcEEEEeeCeeecCCCCCccccCccccCc-hHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHH
Q 023205          190 LLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGS-PMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRA  262 (286)
Q Consensus       190 ~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~  262 (286)
                      .+.      ..|++++.|.||.+-.+............... .........   ..+|+     ..+...+|+|++++.+
T Consensus       162 tk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~pl-----~R~~~peevA~~v~fL  233 (255)
T d1gega_         162 TQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFA---KRITL-----GRLSEPEDVAACVSYL  233 (255)
T ss_dssp             HHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHH---TTCTT-----CSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHhhhhCcEEEEEecCcccChHHhhhhhhhHhhhcccchhHHHHHH---hcCCC-----CCCcCHHHHHHHHHHH
Confidence            653      67899999999988533210000000000000 000000011   12222     2467899999999999


Q ss_pred             hcCC--CCCCCeeEeccccc
Q 023205          263 ATDP--VFPPGIVDVHGILR  280 (286)
Q Consensus       263 l~~~--~~~~~~~~l~~~~~  280 (286)
                      +...  ...|+++.+.|+-.
T Consensus       234 ~S~~a~~itG~~i~vDGG~~  253 (255)
T d1gega_         234 ASPDSDYMTGQSLLIDGGMV  253 (255)
T ss_dssp             HSGGGTTCCSCEEEESSSSS
T ss_pred             hCchhCCccCcEEEecCCEE
Confidence            9643  34689999988754

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.85  E-value=2.3e-20  Score=152.07  Aligned_cols=209  Identities=13%  Similarity=0.011  Sum_probs=150.6

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc-cccCCceeEEeccCCCHhHHHHHhc---CCCEEEEccc
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-DSWANNVIWHQGNLLSSDSWKEALD---GVTAVISCVG  130 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~-~~~~~~~~~i~~Dl~d~~~~~~~~~---~~d~vi~~a~  130 (286)
                      ..|++|||||++.||+.++++|+++|++|++.+|+.++... .....++..+.+|++|+++++++++   .+|++|||||
T Consensus         4 ~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDilVnnAg   83 (242)
T d1cyda_           4 SGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGIGPVDLLVNNAA   83 (242)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCSEEEECCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHHcCCCeEEEECCc
Confidence            46899999999999999999999999999999998654221 1123578899999999999998887   4799999998


Q ss_pred             cCCC----------cchhhhhhhHHHHHHHHHHHH-----cCCCEEEEEecCCcCCCCccccchHHHHHHHHHHHHH---
Q 023205          131 GFGS----------NSYMYKINGTANINAIRAASE-----KGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLT---  192 (286)
Q Consensus       131 ~~~~----------~~~~~~~~~~~~~~l~~~a~~-----~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~~---  192 (286)
                      ....          +...+++|+.++..+.+++.+     .+-.++|++||.......+....|+.+|...+.+.+.   
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~  163 (242)
T d1cyda_          84 LVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAMAM  163 (242)
T ss_dssp             CCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHH
T ss_pred             cccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhccccCCccccccchHHHHHHHHHHHHH
Confidence            6532          235678999999888776532     2335899999964333444567899999999987753   


Q ss_pred             ---hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcCC--C
Q 023205          193 ---RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDP--V  267 (286)
Q Consensus       193 ---~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~--~  267 (286)
                         ..|+++++|.||.+..+...... .    -....+.+..      .+|+     ..+...+|+|+++..++.+.  .
T Consensus       164 e~~~~gIrvN~I~PG~i~T~~~~~~~-~----~~~~~~~~~~------~~pl-----~R~~~peeva~~v~fL~S~~s~~  227 (242)
T d1cyda_         164 ELGPHKIRVNSVNPTVVLTDMGKKVS-A----DPEFARKLKE------RHPL-----RKFAEVEDVVNSILFLLSDRSAS  227 (242)
T ss_dssp             HHGGGTEEEEEEEECCBTTHHHHHHT-C----CHHHHHHHHH------HSTT-----SSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HhCccCeecccCCCCCccCHHHHhhc-C----CHHHHHHHHh------cCCC-----CCCcCHHHHHHHHHHHhCchhcC
Confidence               57899999999988643211000 0    0011111111      1222     24678999999999998643  3


Q ss_pred             CCCCeeEecccc
Q 023205          268 FPPGIVDVHGIL  279 (286)
Q Consensus       268 ~~~~~~~l~~~~  279 (286)
                      ..|+++.+.|+.
T Consensus       228 itG~~i~vDGG~  239 (242)
T d1cyda_         228 TSGGGILVDAGY  239 (242)
T ss_dssp             CCSSEEEESTTG
T ss_pred             cCCceEEeCcch
Confidence            578999998874

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=99.85  E-value=2.9e-20  Score=152.35  Aligned_cols=209  Identities=16%  Similarity=0.167  Sum_probs=149.4

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc---c-ccCCceeEEeccCCCHhHHHHHhc-------CC
Q 023205           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR---D-SWANNVIWHQGNLLSSDSWKEALD-------GV  122 (286)
Q Consensus        54 ~~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~---~-~~~~~~~~i~~Dl~d~~~~~~~~~-------~~  122 (286)
                      ...|+++||||++.||+++++.|+++|++|++.+|+.+....   + ....++.++.+|++|+++++++++       ++
T Consensus         4 L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~i   83 (251)
T d1zk4a1           4 LDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPV   83 (251)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHHHHHHHhCCc
Confidence            347899999999999999999999999999999998654211   1 123578999999999998877664       58


Q ss_pred             CEEEEccccCCC----------cchhhhhhhHHHHHHHHHHHH----cCCC-EEEEEecCCcCCCCccccchHHHHHHHH
Q 023205          123 TAVISCVGGFGS----------NSYMYKINGTANINAIRAASE----KGVK-RFVYISAADFGVANYLLQGYYEGKRAAE  187 (286)
Q Consensus       123 d~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~~----~~v~-~~v~~Ss~~~~~~~~~~~~y~~sK~~~E  187 (286)
                      |++|||||....          +...+++|+.++..+.+++..    .+.. ++|++||...-...+....|+.+|...+
T Consensus        84 DiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~~~~~~~~Y~asKaal~  163 (251)
T d1zk4a1          84 STLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVR  163 (251)
T ss_dssp             CEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTTCHHHHHHHHHHH
T ss_pred             eEEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceeccCCCchhHHHHHHHHh
Confidence            999999987531          235678999999988887643    3333 7899999533233344568999999988


Q ss_pred             HHHH----H----hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHH
Q 023205          188 TELL----T----RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVA  259 (286)
Q Consensus       188 ~~~~----~----~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~  259 (286)
                      .+.+    +    ..|++++.|.||.+..+.....        ... +..   ......+|+     ..+..++|+|+++
T Consensus       164 ~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~~~~~~--------~~~-~~~---~~~~~~~pl-----~R~~~pedvA~~v  226 (251)
T d1zk4a1         164 IMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDL--------PGA-EEA---MSQRTKTPM-----GHIGEPNDIAYIC  226 (251)
T ss_dssp             HHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTS--------TTH-HHH---HTSTTTCTT-----SSCBCHHHHHHHH
T ss_pred             cchHHHHHHHhcCCCcEEEEEEeCCCCCChhHHhc--------CCH-HHH---HHHHhCCCC-----CCCcCHHHHHHHH
Confidence            7554    1    4689999999999864321110        000 111   111122333     2467899999999


Q ss_pred             HHHhcCCC--CCCCeeEecccc
Q 023205          260 VRAATDPV--FPPGIVDVHGIL  279 (286)
Q Consensus       260 ~~~l~~~~--~~~~~~~l~~~~  279 (286)
                      +.++.+..  ..|+++.+.|+-
T Consensus       227 ~fL~S~~s~~itG~~i~vDGG~  248 (251)
T d1zk4a1         227 VYLASNESKFATGSEFVVDGGY  248 (251)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHhCchhCCCcCcEEEECccc
Confidence            99986433  568999998874

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=99.84  E-value=6.3e-20  Score=150.91  Aligned_cols=215  Identities=16%  Similarity=0.069  Sum_probs=149.9

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc-----cccCCceeEEeccCCCHhHHHHHhc--------
Q 023205           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD--------  120 (286)
Q Consensus        54 ~~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~-----~~~~~~~~~i~~Dl~d~~~~~~~~~--------  120 (286)
                      ...|++|||||++.||++++++|+++|++|++.+|++++...     ......+.++.+|+++.++++++++        
T Consensus         4 L~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~g   83 (258)
T d1ae1a_           4 LKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDG   83 (258)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTS
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHhCC
Confidence            347899999999999999999999999999999998654211     1123568889999999998877653        


Q ss_pred             CCCEEEEccccCCC----------cchhhhhhhHHHHHHHHHHH----HcCCCEEEEEecCCcCCCCccccchHHHHHHH
Q 023205          121 GVTAVISCVGGFGS----------NSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEGKRAA  186 (286)
Q Consensus       121 ~~d~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~----~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~  186 (286)
                      .+|+++||||....          +...+++|+.++..+.+++.    +.+..++|++||............|+.+|...
T Consensus        84 ~idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~al  163 (258)
T d1ae1a_          84 KLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGAI  163 (258)
T ss_dssp             CCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCTTCHHHHHHHHHH
T ss_pred             CcEEEeccccccccCccccCCHHHHhhhhhhccccccccccccccccccccccccccccccccccccccchhHHHHHHHH
Confidence            37999999986532          23567899999988877664    34556999999964333344567899999999


Q ss_pred             HHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHH
Q 023205          187 ETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAV  260 (286)
Q Consensus       187 E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~  260 (286)
                      +.+.+.      ..|+++++|.||.+..+.....+...    ....+.......   ..|+     ..+...+|+|+++.
T Consensus       164 ~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~----~~~~~~~~~~~~---~~pl-----gR~~~pediA~~v~  231 (258)
T d1ae1a_         164 NQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKN----PHQKEEIDNFIV---KTPM-----GRAGKPQEVSALIA  231 (258)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECSBC-----------------CHHHHHHHHH---HSTT-----CSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHhcCcCcEEEEEEeeCcccCcchhhhhhhh----hhhHHHHHHHHh---cCCC-----CCCcCHHHHHHHHH
Confidence            987753      57899999999999765432211000    001111111111   1222     23689999999999


Q ss_pred             HHhcC--CCCCCCeeEeccccc
Q 023205          261 RAATD--PVFPPGIVDVHGILR  280 (286)
Q Consensus       261 ~~l~~--~~~~~~~~~l~~~~~  280 (286)
                      .++.+  ....|+.+.+.|+-.
T Consensus       232 fL~S~~s~~itG~~i~vDGG~s  253 (258)
T d1ae1a_         232 FLCFPAASYITGQIIWADGGFT  253 (258)
T ss_dssp             HHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHhChhhCCCcCcEEEeCCCee
Confidence            99954  335789999988754

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=99.84  E-value=2.4e-20  Score=153.57  Aligned_cols=214  Identities=18%  Similarity=0.061  Sum_probs=151.3

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc-----cccCCceeEEeccCCCHhHHHHHhc--------
Q 023205           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD--------  120 (286)
Q Consensus        54 ~~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~-----~~~~~~~~~i~~Dl~d~~~~~~~~~--------  120 (286)
                      ...|+++||||++.||+++++.|+++|++|++.+|+.++...     .....++.++.+|++|+++++++++        
T Consensus         6 L~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~   85 (259)
T d2ae2a_           6 LEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHG   85 (259)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTT
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHHhCC
Confidence            357899999999999999999999999999999998654211     1123578889999999988776653        


Q ss_pred             CCCEEEEccccCCC----------cchhhhhhhHHHHHHHHHHH----HcCCCEEEEEecCCcCCCCccccchHHHHHHH
Q 023205          121 GVTAVISCVGGFGS----------NSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEGKRAA  186 (286)
Q Consensus       121 ~~d~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~----~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~  186 (286)
                      .+|++|||||....          +...+++|+.++..+.+++.    +.+-.++|++||.......+....|+.+|...
T Consensus        86 ~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaal  165 (259)
T d2ae2a_          86 KLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAM  165 (259)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCTTCHHHHHHHHHH
T ss_pred             CceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhcccccccccccccccccccccchHHHHHHH
Confidence            37999999996531          23567899999988877664    34445899999964333444567899999999


Q ss_pred             HHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHH
Q 023205          187 ETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAV  260 (286)
Q Consensus       187 E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~  260 (286)
                      +.+.+.      ..|++++.|.||.+-.+........     ....+.+....   ..+|+     ..+..++|+|++++
T Consensus       166 ~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~-----~~~~~~~~~~~---~~~pl-----~R~g~pedvA~~v~  232 (259)
T d2ae2a_         166 DQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQD-----PEQKENLNKLI---DRCAL-----RRMGEPKELAAMVA  232 (259)
T ss_dssp             HHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTS-----HHHHHHHHHHH---HTSTT-----CSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHhCcCceEEEEeeeCcccCHHHHhhhhc-----hhhHHHHHHHH---hcCCC-----CCCcCHHHHHHHHH
Confidence            987653      5789999999999854321100000     00011111111   12333     23678999999999


Q ss_pred             HHhcCC--CCCCCeeEeccccc
Q 023205          261 RAATDP--VFPPGIVDVHGILR  280 (286)
Q Consensus       261 ~~l~~~--~~~~~~~~l~~~~~  280 (286)
                      .++.+.  ...|+++.+.|+-.
T Consensus       233 fL~S~~s~~itG~~i~VDGG~~  254 (259)
T d2ae2a_         233 FLCFPAASYVTGQIIYVDGGLM  254 (259)
T ss_dssp             HHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHhCchhCCCcCcEEEECCCeE
Confidence            998643  35789999998754

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.83  E-value=3e-20  Score=151.58  Aligned_cols=205  Identities=17%  Similarity=0.124  Sum_probs=145.9

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc------cccCCceeEEeccCCCHhHHHHHhc-------CCC
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD-------GVT  123 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~------~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d  123 (286)
                      +.||||||++.||++++++|+++|++|++.+++..+...      +....++.++.+|++|+++++++++       .+|
T Consensus         2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD   81 (244)
T d1edoa_           2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTID   81 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCS
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence            379999999999999999999999999987665433211      1224578899999999998887764       589


Q ss_pred             EEEEccccCCC----------cchhhhhhhHHHHHHHHHHH----HcCCCEEEEEecCCcCCCCccccchHHHHHHHHHH
Q 023205          124 AVISCVGGFGS----------NSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEGKRAAETE  189 (286)
Q Consensus       124 ~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~----~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~  189 (286)
                      ++|||||....          +...+++|+.++..+.+++.    +.+-.+||++||...-........|+.+|...+.+
T Consensus        82 iLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~~~~Y~asKaal~~l  161 (244)
T d1edoa_          82 VVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGF  161 (244)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHHHHHH
T ss_pred             ccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhhcCCCCCCHHHHHHHHHHHHC
Confidence            99999986532          23567899999988877664    34556999999953222233456899999999987


Q ss_pred             HHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHh
Q 023205          190 LLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAA  263 (286)
Q Consensus       190 ~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l  263 (286)
                      .+.      ..|+++++|.||.+-.+.....           .+-......  ..+|+     ..+...+|+|+++..++
T Consensus       162 tk~lA~el~~~gIrvN~I~PG~i~T~~~~~~-----------~~~~~~~~~--~~~pl-----~R~~~p~dvA~~v~fLa  223 (244)
T d1edoa_         162 SKTAAREGASRNINVNVVCPGFIASDMTAKL-----------GEDMEKKIL--GTIPL-----GRTGQPENVAGLVEFLA  223 (244)
T ss_dssp             HHHHHHHHHTTTEEEEEEEECSBCSHHHHTT-----------CHHHHHHHH--TSCTT-----CSCBCHHHHHHHHHHHH
T ss_pred             hHHHHHHHhhhCcEEEEEecceeccHHHHHh-----------hHHHHHHHH--hcCCC-----CCCcCHHHHHHHHHHHH
Confidence            753      5799999999998854321110           011111111  12332     23678999999999986


Q ss_pred             cCCC---CCCCeeEecccc
Q 023205          264 TDPV---FPPGIVDVHGIL  279 (286)
Q Consensus       264 ~~~~---~~~~~~~l~~~~  279 (286)
                      ..++   ..|+++.+.|+-
T Consensus       224 ~S~~a~~itG~~i~vdGG~  242 (244)
T d1edoa_         224 LSPAASYITGQAFTIDGGI  242 (244)
T ss_dssp             HCSGGGGCCSCEEEESTTT
T ss_pred             CCchhcCCcCCeEEeCCCe
Confidence            4332   568999998874

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=99.83  E-value=7.4e-20  Score=149.02  Aligned_cols=207  Identities=18%  Similarity=0.137  Sum_probs=149.2

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc--cccCCceeEEeccCCCHhHHHHHhc-------CCCEE
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSWANNVIWHQGNLLSSDSWKEALD-------GVTAV  125 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~--~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d~v  125 (286)
                      ..|+++||||++.||+.+++.|+++|++|++..|+.++...  +....++.++++|++++++++++++       .+|++
T Consensus         4 ~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~i~~~~~~i~~~~g~iDiL   83 (241)
T d2a4ka1           4 SGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHGV   83 (241)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEe
Confidence            47899999999999999999999999999999998765322  2234578899999999998877664       58999


Q ss_pred             EEccccCCC----------cchhhhhhhHHHHHHHHHHHHcC--CCEEEEEecCCcCCCCccccchHHHHHHHHHHHHH-
Q 023205          126 ISCVGGFGS----------NSYMYKINGTANINAIRAASEKG--VKRFVYISAADFGVANYLLQGYYEGKRAAETELLT-  192 (286)
Q Consensus       126 i~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~~~~--v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~~-  192 (286)
                      ||||+....          +...+++|+.+...+.+++....  -+.++++||. .....+....|+.+|...|.+.+. 
T Consensus        84 innAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ss~-a~~~~~~~~~Y~~sK~al~~lt~~l  162 (241)
T d2a4ka1          84 AHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSV-AGLGAFGLAHYAAGKLGVVGLARTL  162 (241)
T ss_dssp             EEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCC-TTCCHHHHHHHHHCSSHHHHHHHHH
T ss_pred             ccccccccccchhhhhccccccccccccccccccccccccccccccceeecccc-ccccccCccccchhhHHHHHHHHHH
Confidence            999986421          23567899999999988876542  2345555553 233334456799999999997753 


Q ss_pred             -----hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcCC-
Q 023205          193 -----RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDP-  266 (286)
Q Consensus       193 -----~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~-  266 (286)
                           ..|+++++|.||.+-.+.....       .....+.+..      ..|.     ..+..++|+|+++..++.+. 
T Consensus       163 A~el~~~gIrvN~I~PG~v~T~~~~~~-------~~~~~~~~~~------~~p~-----~r~~~p~dva~~v~fL~S~~s  224 (241)
T d2a4ka1         163 ALELARKGVRVNVLLPGLIQTPMTAGL-------PPWAWEQEVG------ASPL-----GRAGRPEEVAQAALFLLSEES  224 (241)
T ss_dssp             HHHHTTTTCEEEEEEECSBCCGGGTTS-------CHHHHHHHHH------TSTT-----CSCBCHHHHHHHHHHHHSGGG
T ss_pred             HHHHhHhCCEEeeeccCcCCCHHHHhh-------hHhHHHHHHh------CCCC-----CCCcCHHHHHHHHHHHhcchh
Confidence                 5789999999999854322110       0111222211      1222     23678999999999999653 


Q ss_pred             -CCCCCeeEeccccc
Q 023205          267 -VFPPGIVDVHGILR  280 (286)
Q Consensus       267 -~~~~~~~~l~~~~~  280 (286)
                       ...|+++.+.|+..
T Consensus       225 ~~itG~~i~vDGG~s  239 (241)
T d2a4ka1         225 AYITGQALYVDGGRS  239 (241)
T ss_dssp             TTCCSCEEEESTTTT
T ss_pred             CCCcCceEEeCCCcc
Confidence             35789999998754

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=99.83  E-value=1e-19  Score=149.25  Aligned_cols=213  Identities=15%  Similarity=0.026  Sum_probs=149.0

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc------cccCCceeEEeccCC-CHhHHHHHh-------c
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLL-SSDSWKEAL-------D  120 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~------~~~~~~~~~i~~Dl~-d~~~~~~~~-------~  120 (286)
                      ..|+||||||++.||..++++|+++|++|+++.|+.++...      .....++.++.+|++ +.+++++++       .
T Consensus         4 ~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~g   83 (254)
T d1sbya1           4 TNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLK   83 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHHHcC
Confidence            46899999999999999999999999999999988765321      112347889999997 555555544       3


Q ss_pred             CCCEEEEccccCC--CcchhhhhhhHHHHHHHHHHHHc-------CCCEEEEEecCCcCCCCccccchHHHHHHHHHHHH
Q 023205          121 GVTAVISCVGGFG--SNSYMYKINGTANINAIRAASEK-------GVKRFVYISAADFGVANYLLQGYYEGKRAAETELL  191 (286)
Q Consensus       121 ~~d~vi~~a~~~~--~~~~~~~~~~~~~~~l~~~a~~~-------~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~  191 (286)
                      .+|++|+|||...  .....+++|+.++.++.+++...       ...++|++||...-........|+.+|.....+.+
T Consensus        84 ~iDilvnnAG~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~~~~~~~~Y~asKaal~~~t~  163 (254)
T d1sbya1          84 TVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVYSASKAAVVSFTN  163 (254)
T ss_dssp             CCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEeCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhccCCCCCHHHHHHHHHHHHHHH
Confidence            6899999999875  34578899999999888877542       12479999995433334446689999999988664


Q ss_pred             H------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcC
Q 023205          192 T------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATD  265 (286)
Q Consensus       192 ~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~  265 (286)
                      .      ..|++++.|.||++..+.... +....+    ..+.+...       +    ......+.+++|++++.+++.
T Consensus       164 ~la~el~~~gIrVn~I~PG~v~T~~~~~-~~~~~~----~~~~~~~~-------~----~~~~~~~~e~va~~~~~~~~~  227 (254)
T d1sbya1         164 SLAKLAPITGVTAYSINPGITRTPLVHT-FNSWLD----VEPRVAEL-------L----LSHPTQTSEQCGQNFVKAIEA  227 (254)
T ss_dssp             HHHHHHHHHSEEEEEEEECSEESHHHHS-CCCGGG----SCTTHHHH-------H----TTSCCEEHHHHHHHHHHHHHH
T ss_pred             HHHhhccccCeEEEEEEeCCCcCccccc-cccchh----HHHHHHhc-------c----ccCCCCCHHHHHHHHHHhhhC
Confidence            2      578999999999997542110 000000    00001110       0    012345899999999998876


Q ss_pred             CCCCCCeeEeccc--cccccc
Q 023205          266 PVFPPGIVDVHGI--LRYSQK  284 (286)
Q Consensus       266 ~~~~~~~~~l~~~--~~~s~~  284 (286)
                      .. .|.++.+.|+  ..+.|.
T Consensus       228 ~~-tG~vi~vdgG~l~~~~~~  247 (254)
T d1sbya1         228 NK-NGAIWKLDLGTLEAIEWT  247 (254)
T ss_dssp             CC-TTCEEEEETTEEEECCCC
T ss_pred             CC-CCCEEEECCCEeCccCCc
Confidence            54 5889999886  344443

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.83  E-value=1.1e-19  Score=150.85  Aligned_cols=219  Identities=13%  Similarity=0.101  Sum_probs=150.1

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc------cc--cCCceeEEeccCCCHhHHHHHhc-----
Q 023205           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DS--WANNVIWHQGNLLSSDSWKEALD-----  120 (286)
Q Consensus        54 ~~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~------~~--~~~~~~~i~~Dl~d~~~~~~~~~-----  120 (286)
                      ...|+++||||++.||+++++.|+++|++|++.+|+.++...      +.  ...++..+.+|++|+++++++++     
T Consensus         3 L~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~   82 (272)
T d1xkqa_           3 FSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQ   82 (272)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            357899999999999999999999999999999998654211      11  12368899999999998887764     


Q ss_pred             --CCCEEEEccccCCC--------------cchhhhhhhHHHHHHHHHHHHc---CCCEEEEEecCCcCCC-CccccchH
Q 023205          121 --GVTAVISCVGGFGS--------------NSYMYKINGTANINAIRAASEK---GVKRFVYISAADFGVA-NYLLQGYY  180 (286)
Q Consensus       121 --~~d~vi~~a~~~~~--------------~~~~~~~~~~~~~~l~~~a~~~---~v~~~v~~Ss~~~~~~-~~~~~~y~  180 (286)
                        ++|++|||||....              +...+++|+.++..+.+++...   +-..+|+++|+..+.. ......|+
T Consensus        83 ~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~Ss~a~~~~~~~~~~Y~  162 (272)
T d1xkqa_          83 FGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQPDFLYYA  162 (272)
T ss_dssp             HSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSSCCCSSHHHH
T ss_pred             hCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccCCccccccchhccccCCCCcchhh
Confidence              58999999986421              1234578999998888776432   2235666666433332 33456799


Q ss_pred             HHHHHHHHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHh-cccCCCCCCCCCccCCCccHH
Q 023205          181 EGKRAAETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQH-AKPLSQLPLVGPLFTPPVNVT  253 (286)
Q Consensus       181 ~sK~~~E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~i~v~  253 (286)
                      .+|...+.+.+.      ..|++++.|.||.+-.+..... ..+    ....+..... ......+|+     ..+...+
T Consensus       163 asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~-~~~----~~~~~~~~~~~~~~~~~~Pl-----gR~g~pe  232 (272)
T d1xkqa_         163 IAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAM-GMP----DQASQKFYNFMASHKECIPI-----GAAGKPE  232 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHT-TCC----HHHHHHHHHHHHHCTTTCTT-----SSCBCHH
T ss_pred             hHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcchhhhcc-CCc----hHHHHHHHHHHHHHhcCCCC-----CCCcCHH
Confidence            999999986652      6789999999999854321100 000    0011111111 112233443     2467899


Q ss_pred             HHHHHHHHHhcCC---CCCCCeeEeccccccc
Q 023205          254 VVAKVAVRAATDP---VFPPGIVDVHGILRYS  282 (286)
Q Consensus       254 Dva~~~~~~l~~~---~~~~~~~~l~~~~~~s  282 (286)
                      |+|++++.++..+   ...|+++.+.|+..+.
T Consensus       233 diA~~v~fL~S~~as~~iTG~~i~vDGG~~l~  264 (272)
T d1xkqa_         233 HIANIILFLADRNLSFYILGQSIVADGGTSLV  264 (272)
T ss_dssp             HHHHHHHHHHCHHHHTTCCSCEEEESTTGGGC
T ss_pred             HHHHHHHHHhCcchhCCccCeEEEeCcCHHHh
Confidence            9999999998632   2579999999987664

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.83  E-value=1.1e-19  Score=150.14  Aligned_cols=218  Identities=14%  Similarity=0.046  Sum_probs=145.7

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc------c--ccCCceeEEeccCCCHhHHHHHhc------
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------D--SWANNVIWHQGNLLSSDSWKEALD------  120 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~------~--~~~~~~~~i~~Dl~d~~~~~~~~~------  120 (286)
                      ..|+++||||++.||++++++|+++|++|++.+|+.++...      .  ....++.++.+|++|+++++++++      
T Consensus         4 ~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~   83 (264)
T d1spxa_           4 AEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKF   83 (264)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence            46899999999999999999999999999999998654211      1  112368999999999998887764      


Q ss_pred             -CCCEEEEccccCC--------------CcchhhhhhhHHHHHHHHHHHHc---CCCEEEEEecCCcCC-CCccccchHH
Q 023205          121 -GVTAVISCVGGFG--------------SNSYMYKINGTANINAIRAASEK---GVKRFVYISAADFGV-ANYLLQGYYE  181 (286)
Q Consensus       121 -~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~l~~~a~~~---~v~~~v~~Ss~~~~~-~~~~~~~y~~  181 (286)
                       ++|++|||||...              .+...+++|+.+...+.+++...   +-.++|+++|+..+. ..+....|+.
T Consensus        84 g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~S~~~~~~~~~~~~~Y~a  163 (264)
T d1spxa_          84 GKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGLHATPDFPYYSI  163 (264)
T ss_dssp             SCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTTSSSSCCTTSHHHHH
T ss_pred             CCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCccccccCcceeeeeeccccccCCCchhhhh
Confidence             5899999998531              12346788999998887776432   224677666643333 3334567999


Q ss_pred             HHHHHHHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHH
Q 023205          182 GKRAAETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVV  255 (286)
Q Consensus       182 sK~~~E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dv  255 (286)
                      +|...+.+.+.      ..|++++.|.||.+-.+..... ..+........+......   ..+|+     ..+...+|+
T Consensus       164 sKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~~~~~-~~~~~~~~~~~~~~~~~~---~~~Pl-----~R~g~pedv  234 (264)
T d1spxa_         164 AKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAM-GMPEETSKKFYSTMATMK---ECVPA-----GVMGQPQDI  234 (264)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC---------------HHHHHHHH---HHCTT-----SSCBCHHHH
T ss_pred             hhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcchhcc-CCcHHHHHHHHHHHHHHH---hcCCC-----CCCcCHHHH
Confidence            99999987653      5789999999999965432211 111111111111111111   11222     246788999


Q ss_pred             HHHHHHHhcCC---CCCCCeeEecccccc
Q 023205          256 AKVAVRAATDP---VFPPGIVDVHGILRY  281 (286)
Q Consensus       256 a~~~~~~l~~~---~~~~~~~~l~~~~~~  281 (286)
                      |++++.++.++   ...|+++.+.|+..+
T Consensus       235 A~~v~fL~S~~~s~~itG~~i~vDGG~sl  263 (264)
T d1spxa_         235 AEVIAFLADRKTSSYIIGHQLVVDGGSSL  263 (264)
T ss_dssp             HHHHHHHHCHHHHTTCCSCEEEESTTGGG
T ss_pred             HHHHHHHhCCcccCCccCceEEeCCChhh
Confidence            99999998633   257899999987643

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=2.4e-19  Score=150.24  Aligned_cols=213  Identities=17%  Similarity=0.099  Sum_probs=150.7

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc----------cccCCceeEEeccCCCHhHHHHHhc---
Q 023205           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR----------DSWANNVIWHQGNLLSSDSWKEALD---  120 (286)
Q Consensus        54 ~~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~----------~~~~~~~~~i~~Dl~d~~~~~~~~~---  120 (286)
                      ...|+++||||++.||++++++|+++|++|++.+|+.++...          .....++..+.+|++|+++++++++   
T Consensus        10 L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~   89 (297)
T d1yxma1          10 LQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTL   89 (297)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHHHH
Confidence            457899999999999999999999999999999998654211          1123478899999999998887764   


Q ss_pred             ----CCCEEEEccccCC----------CcchhhhhhhHHHHHHHHHHHH----cCCCEEEEEecCCcCCCCccccchHHH
Q 023205          121 ----GVTAVISCVGGFG----------SNSYMYKINGTANINAIRAASE----KGVKRFVYISAADFGVANYLLQGYYEG  182 (286)
Q Consensus       121 ----~~d~vi~~a~~~~----------~~~~~~~~~~~~~~~l~~~a~~----~~v~~~v~~Ss~~~~~~~~~~~~y~~s  182 (286)
                          .+|++|||||...          .+...+++|+.++..+.+++..    .+-.++|++|+... ...+....|+.+
T Consensus        90 ~~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~Ii~~ss~~~-~~~~~~~~Y~as  168 (297)
T d1yxma1          90 DTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTK-AGFPLAVHSGAA  168 (297)
T ss_dssp             HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCCT-TCCTTCHHHHHH
T ss_pred             HHhCCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhcccccccccccccccc-ccccccccchhH
Confidence                5899999998642          1235678999999988887753    33447888876432 223345679999


Q ss_pred             HHHHHHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHH
Q 023205          183 KRAAETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVA  256 (286)
Q Consensus       183 K~~~E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva  256 (286)
                      |...+.+.+.      ..|+++++|.||.+..+......       ....+.+...  ....+|+     ..+...+|+|
T Consensus       169 Kaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~-------~~~~~~~~~~--~~~~~pl-----gR~g~pedvA  234 (297)
T d1yxma1         169 RAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENY-------GSWGQSFFEG--SFQKIPA-----KRIGVPEEVS  234 (297)
T ss_dssp             HHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTS-------GGGGGGGGTT--GGGGSTT-----SSCBCTHHHH
T ss_pred             HHHHHHHHHHHHHHhcccCceEEEeeeCcCcCcchhhhc-------cccCHHHHHH--HHhcCCC-----CCCcCHHHHH
Confidence            9999987653      57899999999999755322111       0000000000  0112232     2467889999


Q ss_pred             HHHHHHhcCC--CCCCCeeEecccccc
Q 023205          257 KVAVRAATDP--VFPPGIVDVHGILRY  281 (286)
Q Consensus       257 ~~~~~~l~~~--~~~~~~~~l~~~~~~  281 (286)
                      ++++.++.+.  ...|+++.+.|+..+
T Consensus       235 ~~v~fL~Sd~s~~iTG~~i~VDGG~sl  261 (297)
T d1yxma1         235 SVVCFLLSPAASFITGQSVDVDGGRSL  261 (297)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHHhCchhcCcCCcEEEeCcChhh
Confidence            9999999643  357899999987654

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=99.83  E-value=1.6e-19  Score=148.68  Aligned_cols=217  Identities=15%  Similarity=0.114  Sum_probs=147.9

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc-----cccCCceeEEeccCCCHhHHHHHhc-------CC
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------GV  122 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~-----~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~  122 (286)
                      ..|+++||||++.||+++++.|+++|++|++.+|+.++...     .....++..+.+|++|+++++++++       .+
T Consensus         4 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   83 (260)
T d1zema1           4 NGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGKI   83 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            46899999999999999999999999999999998654211     1223478899999999988887764       58


Q ss_pred             CEEEEccccCCC-----------cchhhhhhhHHHHHHHHHHH----HcCCCEEEEEecCCcCCCCccccchHHHHHHHH
Q 023205          123 TAVISCVGGFGS-----------NSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEGKRAAE  187 (286)
Q Consensus       123 d~vi~~a~~~~~-----------~~~~~~~~~~~~~~l~~~a~----~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E  187 (286)
                      |++|||||....           +...+++|+.++..+.+++.    +.+-.++|++||...-........|+.+|...+
T Consensus        84 DilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~~~~Y~asKaal~  163 (260)
T d1zema1          84 DFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKGAII  163 (260)
T ss_dssp             CEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTTBHHHHHHHHHHH
T ss_pred             CeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhhccCCcchHHHHHHHHHHH
Confidence            999999986421           23566899999988877764    334458999999532222334568999999999


Q ss_pred             HHHHH------hCCCcEEEEeeCeeecCCCCCcc-----ccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHH
Q 023205          188 TELLT------RYPYGGVILRPGFIYGTRTVGGM-----KLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVA  256 (286)
Q Consensus       188 ~~~~~------~~g~~~~ilRp~~v~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva  256 (286)
                      .+.+.      ..|++++.|.||.+-.+......     ...........+.+.....  ..+|+     ..+..++|+|
T Consensus       164 ~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~Pl-----~R~g~pedvA  236 (260)
T d1zema1         164 ALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMI--GSVPM-----RRYGDINEIP  236 (260)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHH--HTSTT-----SSCBCGGGSH
T ss_pred             HHHHHHHHHhhhhCCEEEEeccCcccCcchhhcchhhhhhhcccccccCHHHHHHHHH--hcCCC-----CCCcCHHHHH
Confidence            87653      57899999999998654210000     0000000000011111111  11222     2357889999


Q ss_pred             HHHHHHhcCC--CCCCCeeEeccc
Q 023205          257 KVAVRAATDP--VFPPGIVDVHGI  278 (286)
Q Consensus       257 ~~~~~~l~~~--~~~~~~~~l~~~  278 (286)
                      ++++.++...  ...|+++.+.|+
T Consensus       237 ~~v~fL~S~~s~~itG~~i~VDGG  260 (260)
T d1zema1         237 GVVAFLLGDDSSFMTGVNLPIAGG  260 (260)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESCC
T ss_pred             HHHHHHhCchhcCccCCeEEeCCC
Confidence            9999999643  356888988774

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.83  E-value=2.5e-19  Score=145.29  Aligned_cols=204  Identities=19%  Similarity=0.126  Sum_probs=147.0

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCC-HhHHHHHhcCCCEEEEccccCC
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLS-SDSWKEALDGVTAVISCVGGFG  133 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d-~~~~~~~~~~~d~vi~~a~~~~  133 (286)
                      ..|++|||||++.||+++++.|+++|++|++.+|+.+...    ..+.+++.+|+++ .+.+.+.+..+|++|||||...
T Consensus         3 kgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~----~~~~~~~~~Dv~~~~~~~~~~~g~iD~lVnnAG~~~   78 (234)
T d1o5ia_           3 RDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLK----RSGHRYVVCDLRKDLDLLFEKVKEVDILVLNAGGPK   78 (234)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH----HTCSEEEECCTTTCHHHHHHHSCCCSEEEECCCCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHH----hcCCcEEEcchHHHHHHHHHHhCCCcEEEecccccC
Confidence            3689999999999999999999999999999999864321    2355788899976 3556666778999999998642


Q ss_pred             C----------cchhhhhhhHHHHHHHHHH----HHcCCCEEEEEecCCcCCCCccccchHHHHHHHHHHHHH------h
Q 023205          134 S----------NSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLT------R  193 (286)
Q Consensus       134 ~----------~~~~~~~~~~~~~~l~~~a----~~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~~------~  193 (286)
                      .          +...+++|+.++..+.+++    ++.+..++|++||............|..+|...+.+.+.      .
T Consensus        79 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~~~~~~~~~~~Y~asKaal~~ltk~lA~ela~  158 (234)
T d1o5ia_          79 AGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIENLYTSNSARMALTGFLKTLSFEVAP  158 (234)
T ss_dssp             CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGG
T ss_pred             CcchhhhhhHHHHHHhhhhhhhhhhhhhcccccccccccccccccccccccccccccccchhHHHHHHHHHHHHHHHhcc
Confidence            1          2355688998888777765    344556899999965555555667899999999976642      5


Q ss_pred             CCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcCC--CCCCC
Q 023205          194 YPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDP--VFPPG  271 (286)
Q Consensus       194 ~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~--~~~~~  271 (286)
                      .|+++++|.||.+-.+......       .   +.......  ..+|+     ..+...+|+|+++..++...  ...|+
T Consensus       159 ~gIrVN~I~PG~v~T~~~~~~~-------~---~~~~~~~~--~~~pl-----~R~~~pediA~~v~fL~S~~s~~itG~  221 (234)
T d1o5ia_         159 YGITVNCVAPGWTETERVKELL-------S---EEKKKQVE--SQIPM-----RRMAKPEEIASVVAFLCSEKASYLTGQ  221 (234)
T ss_dssp             GTEEEEEEEECSBCCTTHHHHS-------C---HHHHHHHH--TTSTT-----SSCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred             cCeEEeecccCccchhhhhhhc-------C---HHHHHHHH--hcCCC-----CCCcCHHHHHHHHHHHhChhhcCCcCc
Confidence            7899999999998655321110       0   01111111  12333     24678999999999998643  35689


Q ss_pred             eeEecccc
Q 023205          272 IVDVHGIL  279 (286)
Q Consensus       272 ~~~l~~~~  279 (286)
                      ++.+.|+-
T Consensus       222 ~i~vDGG~  229 (234)
T d1o5ia_         222 TIVVDGGL  229 (234)
T ss_dssp             EEEESTTC
T ss_pred             EEEECccc
Confidence            99998864

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.82  E-value=1.3e-19  Score=150.31  Aligned_cols=217  Identities=12%  Similarity=0.032  Sum_probs=149.1

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc------cc--cCCceeEEeccCCCHhHHHHHhc------
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DS--WANNVIWHQGNLLSSDSWKEALD------  120 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~------~~--~~~~~~~i~~Dl~d~~~~~~~~~------  120 (286)
                      ..|+++||||++.||+++++.|+++|++|++.+|+.++...      +.  ...++..+.+|++|+++++++++      
T Consensus         3 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   82 (274)
T d1xhla_           3 SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKF   82 (274)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHHHc
Confidence            46899999999999999999999999999999998654211      11  12468899999999998877764      


Q ss_pred             -CCCEEEEccccCC------------CcchhhhhhhHHHHHHHHHHHH----cCCCEEEEEecCCcCCCCccccchHHHH
Q 023205          121 -GVTAVISCVGGFG------------SNSYMYKINGTANINAIRAASE----KGVKRFVYISAADFGVANYLLQGYYEGK  183 (286)
Q Consensus       121 -~~d~vi~~a~~~~------------~~~~~~~~~~~~~~~l~~~a~~----~~v~~~v~~Ss~~~~~~~~~~~~y~~sK  183 (286)
                       .+|++|||||...            .+...+++|+.+...+.+++..    .+-.+++++||............|+.+|
T Consensus        83 G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~~~~~~~~~~~~Y~asK  162 (274)
T d1xhla_          83 GKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSGYPYYACAK  162 (274)
T ss_dssp             SCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSCCTTSHHHHHHH
T ss_pred             CCceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccccccccchhhhhccccCCCCceehhhh
Confidence             5799999998531            1134568899999888777643    3445677777643222233456799999


Q ss_pred             HHHHHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhc-ccCCCCCCCCCccCCCccHHHHH
Q 023205          184 RAAETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHA-KPLSQLPLVGPLFTPPVNVTVVA  256 (286)
Q Consensus       184 ~~~E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~i~v~Dva  256 (286)
                      ...+.+.+.      ..|++++.|.||.+-.+...... ..    ....+...... .....+|+     ..+...+|+|
T Consensus       163 aal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~-~~----~~~~~~~~~~~~~~~~~iPl-----gR~g~pediA  232 (274)
T d1xhla_         163 AALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMG-LP----ETASDKLYSFIGSRKECIPV-----GHCGKPEEIA  232 (274)
T ss_dssp             HHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTT-CC----HHHHHHHHHHHHHCTTTCTT-----SSCBCHHHHH
T ss_pred             hHHHHHHHHHHHHHhHhCCceeeeccCCCcCchhhhhc-cc----chhhHHHHHHHHHHHcCCCC-----CCCcCHHHHH
Confidence            999987653      57899999999999644221100 00    00111111111 11223443     2457899999


Q ss_pred             HHHHHHhcC---CCCCCCeeEecccccc
Q 023205          257 KVAVRAATD---PVFPPGIVDVHGILRY  281 (286)
Q Consensus       257 ~~~~~~l~~---~~~~~~~~~l~~~~~~  281 (286)
                      ++++.++..   ....|+++.+.|+..+
T Consensus       233 ~~v~fL~S~d~s~~itG~~i~vDGG~~l  260 (274)
T d1xhla_         233 NIIVFLADRNLSSYIIGQSIVADGGSTL  260 (274)
T ss_dssp             HHHHHHHCHHHHTTCCSCEEEESTTGGG
T ss_pred             HHHHHHcCCccccCccCcEEEeCcCHHH
Confidence            999999853   2357899999988653

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.82  E-value=2.5e-19  Score=146.16  Aligned_cols=215  Identities=10%  Similarity=0.007  Sum_probs=152.3

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHh---cCCCEEEEccc
Q 023205           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEAL---DGVTAVISCVG  130 (286)
Q Consensus        54 ~~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~---~~~d~vi~~a~  130 (286)
                      ...|++|||||++.||+++++.|+++|++|++.+|++++........+++...+|+.+.+.++..+   .++|++|||+|
T Consensus         4 l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~id~lVn~ag   83 (245)
T d2ag5a1           4 LDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQFANEVERLDVLFNVAG   83 (245)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGSTTEEEEECCTTCHHHHHHHHHHCSCCSEEEECCC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhccCCceeeeeccccccccccccccccceeEEeccc
Confidence            457899999999999999999999999999999998755333333467889999998877666554   46899999998


Q ss_pred             cCCC----------cchhhhhhhHHHHHHHHHHHH----cCCCEEEEEecCCcC-CCCccccchHHHHHHHHHHHHH---
Q 023205          131 GFGS----------NSYMYKINGTANINAIRAASE----KGVKRFVYISAADFG-VANYLLQGYYEGKRAAETELLT---  192 (286)
Q Consensus       131 ~~~~----------~~~~~~~~~~~~~~l~~~a~~----~~v~~~v~~Ss~~~~-~~~~~~~~y~~sK~~~E~~~~~---  192 (286)
                      ....          +...+++|+.++..+.+++..    .+-.++|++||.... ........|+.+|...+.+.+.   
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~~~~~Y~~sKaal~~l~r~lA~  163 (245)
T d2ag5a1          84 FVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAA  163 (245)
T ss_dssp             CCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCTTBHHHHHHHHHHHHHHHHHHH
T ss_pred             ccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeeeeechhhccCCccchhHHHHHHHHHHHHHHHHHH
Confidence            7532          235668999999888776643    444589999985332 2234557899999999987753   


Q ss_pred             ---hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcCC--C
Q 023205          193 ---RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDP--V  267 (286)
Q Consensus       193 ---~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~--~  267 (286)
                         ..|++++.|.||.+-.+.......    ..... +.......  ..+|+     ..+...+|+|+++..++...  .
T Consensus       164 e~~~~gIrvN~I~PG~i~T~~~~~~~~----~~~~~-~~~~~~~~--~~~pl-----~R~~~pedva~~v~fL~s~~s~~  231 (245)
T d2ag5a1         164 DFIQQGIRCNCVCPGTVDTPSLQERIQ----ARGNP-EEARNDFL--KRQKT-----GRFATAEEIAMLCVYLASDESAY  231 (245)
T ss_dssp             HHGGGTEEEEEEEESCEECHHHHHHHH----HSSSH-HHHHHHHH--HTCTT-----SSCEEHHHHHHHHHHHHSGGGTT
T ss_pred             HhhhhCcEEEEEeeceeechhhHhhhh----hhhhh-HHHHHHHH--hcCCC-----CCCcCHHHHHHHHHHHhChhhCC
Confidence               579999999999996543210000    00000 11111111  11222     24678999999999999753  3


Q ss_pred             CCCCeeEeccccc
Q 023205          268 FPPGIVDVHGILR  280 (286)
Q Consensus       268 ~~~~~~~l~~~~~  280 (286)
                      ..|+++.+.|+..
T Consensus       232 iTG~~i~VDGG~s  244 (245)
T d2ag5a1         232 VTGNPVIIDGGWS  244 (245)
T ss_dssp             CCSCEEEECTTGG
T ss_pred             CcCceEEeCCCcC
Confidence            5789999998764

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.82  E-value=1.3e-19  Score=148.51  Aligned_cols=212  Identities=15%  Similarity=0.149  Sum_probs=148.1

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCccc--ccccCCceeEEeccCCCHhHHHHHhc-------CCCE
Q 023205           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSL--RDSWANNVIWHQGNLLSSDSWKEALD-------GVTA  124 (286)
Q Consensus        54 ~~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~--~~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d~  124 (286)
                      ...|+++||||++.||+++++.|+++|++|++.+|+.++..  .+....+..++++|++|+++++++++       .+|+
T Consensus         4 L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iDi   83 (253)
T d1hxha_           4 LQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNV   83 (253)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEeecCCHHHHHHHHHHHHHHhCCCCe
Confidence            34689999999999999999999999999999999865421  12234678899999999988877664       5799


Q ss_pred             EEEccccCCC----------cchhhhhhhHHHHHHHHHHHHc---CCCEEEEEecCCcCCCCccccchHHHHHHHHHHHH
Q 023205          125 VISCVGGFGS----------NSYMYKINGTANINAIRAASEK---GVKRFVYISAADFGVANYLLQGYYEGKRAAETELL  191 (286)
Q Consensus       125 vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~~~---~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~  191 (286)
                      +|||||....          +...+++|+.++..+.+++...   .-.+||++||............|+.+|...+.+.+
T Consensus        84 lVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~isS~~~~~~~~~~~~Y~asKaal~~lt~  163 (253)
T d1hxha_          84 LVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSSWLPIEQYAGYSASKAAVSALTR  163 (253)
T ss_dssp             EEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHH
T ss_pred             EEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCceecccchhhhcCccccccccchhHHHHHHHH
Confidence            9999996531          2356789999998887776542   22589999995433334455689999999988664


Q ss_pred             H------h--CCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHh
Q 023205          192 T------R--YPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAA  263 (286)
Q Consensus       192 ~------~--~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l  263 (286)
                      .      .  ++++++.|.||.+..+.....  .+.    ...+......  ....|     ...+...+|+|++++.++
T Consensus       164 ~lA~e~~~~g~~IrVN~I~PG~i~T~~~~~~--~~~----~~~~~~~~~~--~~~~~-----~gr~~~pedvA~~v~fL~  230 (253)
T d1hxha_         164 AAALSCRKQGYAIRVNSIHPDGIYTPMMQAS--LPK----GVSKEMVLHD--PKLNR-----AGRAYMPERIAQLVLFLA  230 (253)
T ss_dssp             HHHHHHHHHTCCEEEEEEEESEECCHHHHHH--SCT----TCCHHHHBCB--TTTBT-----TCCEECHHHHHHHHHHHH
T ss_pred             HHHHHHhhcCCCEEEEEEeECCCcCHhHHhh--Ccc----hhhHHHHHhC--ccccc-----cCCCCCHHHHHHHHHHHh
Confidence            2      2  469999999999964321100  000    0001011100  00111     124678899999999998


Q ss_pred             cCC--CCCCCeeEeccc
Q 023205          264 TDP--VFPPGIVDVHGI  278 (286)
Q Consensus       264 ~~~--~~~~~~~~l~~~  278 (286)
                      .+.  ...|+++++.|+
T Consensus       231 S~~s~~itG~~i~VDGG  247 (253)
T d1hxha_         231 SDESSVMSGSELHADNS  247 (253)
T ss_dssp             SGGGTTCCSCEEEESSS
T ss_pred             ChhhCCCcCcEEEECcc
Confidence            643  357899999886

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=99.82  E-value=1.9e-19  Score=146.48  Aligned_cols=184  Identities=13%  Similarity=0.031  Sum_probs=135.7

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCe-------EEEEecCCCcccc-----cccCCceeEEeccCCCHhHHHHHhc----
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGLT-------VASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD----  120 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~~-------V~~l~R~~~~~~~-----~~~~~~~~~i~~Dl~d~~~~~~~~~----  120 (286)
                      +.||||||++.||+++++.|+++|++       |++..|+.++...     .....++.++.+|++|+++++++++    
T Consensus         2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~   81 (240)
T d2bd0a1           2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVE   81 (240)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            35899999999999999999999987       8888888654211     1123578889999999998887664    


Q ss_pred             ---CCCEEEEccccCCC----------cchhhhhhhHHHHHHHHHHH----HcCCCEEEEEecCCcCCCCccccchHHHH
Q 023205          121 ---GVTAVISCVGGFGS----------NSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEGK  183 (286)
Q Consensus       121 ---~~d~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~----~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK  183 (286)
                         .+|++|||||....          +...+++|+.++..+.+++.    +.+-.++|++||...-...+....|+.+|
T Consensus        82 ~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asK  161 (240)
T d2bd0a1          82 RYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCMSK  161 (240)
T ss_dssp             HTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             HcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhhcCCCCCChHHHHHH
Confidence               58999999986531          23567899999988777764    44556899999964333334467899999


Q ss_pred             HHHHHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHH
Q 023205          184 RAAETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAK  257 (286)
Q Consensus       184 ~~~E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~  257 (286)
                      ...+.+.+.      ..|++++.|.||.+-.+.....                         +  ......+...+|+|+
T Consensus       162 ~al~~lt~~la~el~~~gIrvn~i~PG~v~T~~~~~~-------------------------~--~~~~~~~~~PedvA~  214 (240)
T d2bd0a1         162 FGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKV-------------------------D--DEMQALMMMPEDIAA  214 (240)
T ss_dssp             HHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCC-------------------------C--STTGGGSBCHHHHHH
T ss_pred             HHHHHHHHHHHHHhCcCCeEEEEeeeCcccCchhhhc-------------------------C--HhhHhcCCCHHHHHH
Confidence            999886642      5789999999999864432100                         0  011123467899999


Q ss_pred             HHHHHhcCCC
Q 023205          258 VAVRAATDPV  267 (286)
Q Consensus       258 ~~~~~l~~~~  267 (286)
                      +++.++..+.
T Consensus       215 ~v~~l~s~~~  224 (240)
T d2bd0a1         215 PVVQAYLQPS  224 (240)
T ss_dssp             HHHHHHTSCT
T ss_pred             HHHHHHcCCc
Confidence            9999998765

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.82  E-value=4.6e-19  Score=145.77  Aligned_cols=211  Identities=12%  Similarity=0.039  Sum_probs=145.5

Q ss_pred             CCCeEEEEcCCC--hhHHHHHHHHHHCCCeEEEEecCCCcccc----cccCCceeEEeccCCCHhHHHHHhc-------C
Q 023205           55 PSEKLLVLGGNG--FVGSHICREALDRGLTVASLSRSGRSSLR----DSWANNVIWHQGNLLSSDSWKEALD-------G  121 (286)
Q Consensus        55 ~~~~VlVtGatG--~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~----~~~~~~~~~i~~Dl~d~~~~~~~~~-------~  121 (286)
                      ..|++|||||+|  .||++++++|+++|++|++..|+.+....    .....+..++++|++|+++++++++       +
T Consensus         7 ~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   86 (256)
T d1ulua_           7 SGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFGG   86 (256)
T ss_dssp             TTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHhhhccCcccccccccCCHHHHHHHHHHHHHhcCC
Confidence            468999999998  79999999999999999888887543111    1113467889999999988887764       5


Q ss_pred             CCEEEEccccCCC--------------cchhhhhhhHHHHHHHHHHHHcC--CCEEEEEecCCcCCCCccccchHHHHHH
Q 023205          122 VTAVISCVGGFGS--------------NSYMYKINGTANINAIRAASEKG--VKRFVYISAADFGVANYLLQGYYEGKRA  185 (286)
Q Consensus       122 ~d~vi~~a~~~~~--------------~~~~~~~~~~~~~~l~~~a~~~~--v~~~v~~Ss~~~~~~~~~~~~y~~sK~~  185 (286)
                      +|++||||+....              +...+++|+.+...+.+.+...-  -.++|++||.......+....|+.+|..
T Consensus        87 iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~Iv~isS~~~~~~~~~~~~Y~asKaa  166 (256)
T d1ulua_          87 LDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVVPKYNVMAIAKAA  166 (256)
T ss_dssp             EEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSBCTTCHHHHHHHHH
T ss_pred             ceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccCCEEEEEeehHhcCCCCCchHHHHHHHH
Confidence            8999999985420              12356788888888887775431  1479999996444444556789999999


Q ss_pred             HHHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHH
Q 023205          186 AETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVA  259 (286)
Q Consensus       186 ~E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~  259 (286)
                      .+.+.+.      ..|++++.|.||.+..+.......     .....+.+..      .+|+     ..+...+|+|+++
T Consensus       167 l~~ltr~lA~ela~~gIrVN~I~PG~i~t~~~~~~~~-----~~~~~~~~~~------~~pl-----~R~~~pedvA~~v  230 (256)
T d1ulua_         167 LEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPG-----FTKMYDRVAQ------TAPL-----RRNITQEEVGNLG  230 (256)
T ss_dssp             HHHHHHHHHHHHGGGTCEEEEEEECCC---------------CHHHHHHHHH------HSTT-----SSCCCHHHHHHHH
T ss_pred             HHHHHHHHHHHhcccCCEEeeeccceeeeccccchhh-----hHHHHHHHHh------cCCC-----CCCcCHHHHHHHH
Confidence            9987653      578999999999987554321100     0111111111      1222     2357889999999


Q ss_pred             HHHhcCCC--CCCCeeEecccccc
Q 023205          260 VRAATDPV--FPPGIVDVHGILRY  281 (286)
Q Consensus       260 ~~~l~~~~--~~~~~~~l~~~~~~  281 (286)
                      +.++.+..  ..|+++.+.|+..+
T Consensus       231 ~fL~S~~s~~itG~~i~VDGG~~~  254 (256)
T d1ulua_         231 LFLLSPLASGITGEVVYVDAGYHI  254 (256)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHhCchhCCccCCeEEECcCEeC
Confidence            99996533  57899999988654

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.81  E-value=2.6e-19  Score=148.56  Aligned_cols=220  Identities=16%  Similarity=0.051  Sum_probs=149.7

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc------cccCCceeEEeccCCCHhHHHHHhc-------
Q 023205           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD-------  120 (286)
Q Consensus        54 ~~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~------~~~~~~~~~i~~Dl~d~~~~~~~~~-------  120 (286)
                      ...|++|||||++.||+++++.|+++|++|++.+|+..+...      ......+.++++|++|++++.+.++       
T Consensus        16 L~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g   95 (272)
T d1g0oa_          16 LEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFG   95 (272)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHHHhC
Confidence            346899999999999999999999999999999988654221      1224578899999999988877764       


Q ss_pred             CCCEEEEccccCCC----------cchhhhhhhHHHHHHHHHHHHcC--CCEEEEEecCC-cCCCCccccchHHHHHHHH
Q 023205          121 GVTAVISCVGGFGS----------NSYMYKINGTANINAIRAASEKG--VKRFVYISAAD-FGVANYLLQGYYEGKRAAE  187 (286)
Q Consensus       121 ~~d~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~~~~--v~~~v~~Ss~~-~~~~~~~~~~y~~sK~~~E  187 (286)
                      ++|+++|+++....          ....+++|+.++..+.+++...-  -.++++++|.. ..........|+.+|...+
T Consensus        96 ~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s~~~~~~~~~~~~~Y~asKaal~  175 (272)
T d1g0oa_          96 KLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKAVPKHAVYSGSKGAIE  175 (272)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCSSCSSCHHHHHHHHHHH
T ss_pred             CCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeeccccccccccccccccccccccccccccchhhHHHHHHHHH
Confidence            57999999986531          23566889999999988887642  24778887742 2223344567999999999


Q ss_pred             HHHHH------hCCCcEEEEeeCeeecCCCCCccccCcccc-CchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHH
Q 023205          188 TELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVI-GSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAV  260 (286)
Q Consensus       188 ~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~  260 (286)
                      .+.+.      ..|++++.|.||.+-.+............. ....+..... .....+|+     ..+...+|+|+++.
T Consensus       176 ~ltk~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~Pl-----gR~~~peevA~~v~  249 (272)
T d1g0oa_         176 TFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEY-AAVQWSPL-----RRVGLPIDIARVVC  249 (272)
T ss_dssp             HHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHH-HHHHSCTT-----CSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHhchhCeEEEEEccCCcCChHHHHHHHhhhhcccccchHHHHHH-HHHccCCC-----CCCcCHHHHHHHHH
Confidence            87753      579999999999995432100000000000 0000100000 00112222     24688999999999


Q ss_pred             HHhcCCC--CCCCeeEecccc
Q 023205          261 RAATDPV--FPPGIVDVHGIL  279 (286)
Q Consensus       261 ~~l~~~~--~~~~~~~l~~~~  279 (286)
                      .++....  ..|+++.+.|+.
T Consensus       250 fL~s~~s~~itG~~i~vDGG~  270 (272)
T d1g0oa_         250 FLASNDGGWVTGKVIGIDGGA  270 (272)
T ss_dssp             HHHSGGGTTCCSCEEEESTTC
T ss_pred             HHhCchhcCccCceEeECCCC
Confidence            9996533  478999999875

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=1.3e-19  Score=147.60  Aligned_cols=186  Identities=13%  Similarity=0.048  Sum_probs=137.9

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc-----cccCCceeEEeccCCCHhHHHHHhc-------C
Q 023205           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------G  121 (286)
Q Consensus        54 ~~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~-----~~~~~~~~~i~~Dl~d~~~~~~~~~-------~  121 (286)
                      ..+|+++||||++.||++++++|+++|++|++.+|+.++...     .....++..+.+|++|+++++++++       .
T Consensus         5 l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~   84 (244)
T d1yb1a_           5 VTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGD   84 (244)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCC
Confidence            347899999999999999999999999999999998765211     1234578999999999998887664       5


Q ss_pred             CCEEEEccccCCC----------cchhhhhhhHHHHHHHHHHH----HcCCCEEEEEecCCcCCCCccccchHHHHHHHH
Q 023205          122 VTAVISCVGGFGS----------NSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEGKRAAE  187 (286)
Q Consensus       122 ~d~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~----~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E  187 (286)
                      +|++|||||....          ....+++|+.++..+.+++-    +.+-.+||++||.......+....|+.+|...+
T Consensus        85 idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asKaal~  164 (244)
T d1yb1a_          85 VSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSKFAAV  164 (244)
T ss_dssp             CSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHHHHHHHHHHHHHHH
T ss_pred             CceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchhcCCCCCcHHHHHHHHHHH
Confidence            8999999997531          23567899999988877653    455568999999643333344567999999988


Q ss_pred             HHHHH---------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHH
Q 023205          188 TELLT---------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKV  258 (286)
Q Consensus       188 ~~~~~---------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~  258 (286)
                      .+.+.         ..|++++++.||++-.+.....              .              .....++..+|+|+.
T Consensus       165 ~~~~~La~El~~~~~~gI~V~~i~PG~v~T~~~~~~--------------~--------------~~~~~~~~pe~va~~  216 (244)
T d1yb1a_         165 GFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNP--------------S--------------TSLGPTLEPEEVVNR  216 (244)
T ss_dssp             HHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTCT--------------H--------------HHHCCCCCHHHHHHH
T ss_pred             HHHHHHHHHHHhhcCCCEEEEEEEcCCCCChhhhCc--------------C--------------ccccCCCCHHHHHHH
Confidence            76642         1589999999998854322100              0              011234678999999


Q ss_pred             HHHHhcCCC
Q 023205          259 AVRAATDPV  267 (286)
Q Consensus       259 ~~~~l~~~~  267 (286)
                      ++..+..+.
T Consensus       217 i~~~~~~~~  225 (244)
T d1yb1a_         217 LMHGILTEQ  225 (244)
T ss_dssp             HHHHHHTTC
T ss_pred             HHHHHhcCC
Confidence            999887653

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=99.81  E-value=5.2e-19  Score=145.70  Aligned_cols=208  Identities=17%  Similarity=0.174  Sum_probs=146.8

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc------cccCCceeEEeccCCCHhHHHHHhc-------C
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD-------G  121 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~------~~~~~~~~~i~~Dl~d~~~~~~~~~-------~  121 (286)
                      +.|++|||||++.||+++++.|+++|++|++.+|+.++...      +....++.++++|++|+++++++++       .
T Consensus         8 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   87 (260)
T d1h5qa_           8 VNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGP   87 (260)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSCS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            46899999999999999999999999999999999876321      1224578899999999998887764       5


Q ss_pred             CCEEEEccccCCC----------cchhhhhhhHHHHHHHHHHHH----c-CCCEEEEEecCCcCCC-------Cccccch
Q 023205          122 VTAVISCVGGFGS----------NSYMYKINGTANINAIRAASE----K-GVKRFVYISAADFGVA-------NYLLQGY  179 (286)
Q Consensus       122 ~d~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~~----~-~v~~~v~~Ss~~~~~~-------~~~~~~y  179 (286)
                      +|++|||||....          +...+++|+.++..+.+++.+    . +-..++..||......       ......|
T Consensus        88 iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~~~~~~~~~~~~Y  167 (260)
T d1h5qa_          88 ISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFY  167 (260)
T ss_dssp             EEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEETTEECSCHHH
T ss_pred             CcEecccccccccCCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeeccccccccccccccCccccch
Confidence            7999999986531          235678999998887776533    2 3345666665321111       1234679


Q ss_pred             HHHHHHHHHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHH
Q 023205          180 YEGKRAAETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVT  253 (286)
Q Consensus       180 ~~sK~~~E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~  253 (286)
                      +.+|...+.+.+.      ..|+++++|.||.+-.+.....       .....+.+..      .+|+     ..+...+
T Consensus       168 ~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~-------~~~~~~~~~~------~~pl-----~R~g~pe  229 (260)
T d1h5qa_         168 NSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHM-------DKKIRDHQAS------NIPL-----NRFAQPE  229 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGS-------CHHHHHHHHH------TCTT-----SSCBCGG
T ss_pred             hhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcchhcc-------CHHHHHHHHh------cCCC-----CCCcCHH
Confidence            9999999987653      5789999999999854432110       0111111111      2332     2357899


Q ss_pred             HHHHHHHHHhcCCC--CCCCeeEeccccc
Q 023205          254 VVAKVAVRAATDPV--FPPGIVDVHGILR  280 (286)
Q Consensus       254 Dva~~~~~~l~~~~--~~~~~~~l~~~~~  280 (286)
                      |+|++++.++.+..  ..|+++.+.|+..
T Consensus       230 dvA~~v~fL~S~~s~~itG~~i~VDGG~~  258 (260)
T d1h5qa_         230 EMTGQAILLLSDHATYMTGGEYFIDGGQL  258 (260)
T ss_dssp             GGHHHHHHHHSGGGTTCCSCEEEECTTGG
T ss_pred             HHHHHHHHHhcchhCCCcCceEEECCCee
Confidence            99999999986433  5789999998763

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.81  E-value=9.9e-20  Score=150.01  Aligned_cols=220  Identities=15%  Similarity=0.053  Sum_probs=148.6

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc------cccCCceeEEeccCCCHhHHHHHhc------
Q 023205           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD------  120 (286)
Q Consensus        53 ~~~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~------~~~~~~~~~i~~Dl~d~~~~~~~~~------  120 (286)
                      |...|+||||||++.||++++++|+++|++|++..|+..+...      .....++..+.+|++|+++++++++      
T Consensus         3 ~L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~   82 (259)
T d1ja9a_           3 PLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHF   82 (259)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHHc
Confidence            4567899999999999999999999999999988776544221      1123478899999999988887764      


Q ss_pred             -CCCEEEEccccCCC----------cchhhhhhhHHHHHHHHHHHHcC--CCEEEEEecCCcCC-CCccccchHHHHHHH
Q 023205          121 -GVTAVISCVGGFGS----------NSYMYKINGTANINAIRAASEKG--VKRFVYISAADFGV-ANYLLQGYYEGKRAA  186 (286)
Q Consensus       121 -~~d~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~~~~--v~~~v~~Ss~~~~~-~~~~~~~y~~sK~~~  186 (286)
                       .+|++|||||....          +...+++|+.+...+++.+...-  -.++++++|..... .......|+.+|...
T Consensus        83 g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~s~~~~~~~~~~~~~Y~asK~al  162 (259)
T d1ja9a_          83 GGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMTGIPNHALYAGSKAAV  162 (259)
T ss_dssp             SCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCCSCCSCHHHHHHHHHH
T ss_pred             CCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCcccccccccccccCCCCchhHHHHHHHH
Confidence             57999999997532          13567899999988888886532  13566666632222 223456799999999


Q ss_pred             HHHHHH------hCCCcEEEEeeCeeecCCCCCccc-cC-ccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHH
Q 023205          187 ETELLT------RYPYGGVILRPGFIYGTRTVGGMK-LP-LGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKV  258 (286)
Q Consensus       187 E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~  258 (286)
                      +.+.+.      ..|+++++|.||++-.+....... .. ........+.+......  ..|+     ..+...+|+|++
T Consensus       163 ~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~pl-----~R~g~p~eVa~~  235 (259)
T d1ja9a_         163 EGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLAN--MNPL-----KRIGYPADIGRA  235 (259)
T ss_dssp             HHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHH--TSTT-----SSCBCHHHHHHH
T ss_pred             HHHHHHHHHHHhhcCeEEeccCcCCccChhhhhhhhhhhhhhcccCCHHHHHHHHHh--CCCC-----CCCcCHHHHHHH
Confidence            987753      578999999999985321100000 00 00001111222221111  1122     246789999999


Q ss_pred             HHHHhcCCC--CCCCeeEecccc
Q 023205          259 AVRAATDPV--FPPGIVDVHGIL  279 (286)
Q Consensus       259 ~~~~l~~~~--~~~~~~~l~~~~  279 (286)
                      +..++.+..  ..|+++.+.|+.
T Consensus       236 v~fL~S~~a~~itG~~i~vDGG~  258 (259)
T d1ja9a_         236 VSALCQEESEWINGQVIKLTGGG  258 (259)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTC
T ss_pred             HHHHhCchhcCCcCceEEeCCCC
Confidence            999997644  578999998864

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=99.80  E-value=1.1e-18  Score=144.83  Aligned_cols=218  Identities=18%  Similarity=0.091  Sum_probs=147.7

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc--cccCCceeEEeccCCCHhHHHHHhc-------CCCEE
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSWANNVIWHQGNLLSSDSWKEALD-------GVTAV  125 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~--~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d~v  125 (286)
                      ..|+++||||++.||+++++.|+++|++|++.+|+.++...  .....++..+.+|++++++++++++       .+|++
T Consensus         4 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~idil   83 (276)
T d1bdba_           4 KGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGDNVLGIVGDVRSLEDQKQAASRCVARFGKIDTL   83 (276)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeeEEecccccHHHHHHHHHHHHHHhCCcccc
Confidence            46899999999999999999999999999999998654211  2224578999999999988877764       58999


Q ss_pred             EEccccCCC---------------cchhhhhhhHHHHHHHHHHH----HcCCCEEEEEecCCcCCCCccccchHHHHHHH
Q 023205          126 ISCVGGFGS---------------NSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEGKRAA  186 (286)
Q Consensus       126 i~~a~~~~~---------------~~~~~~~~~~~~~~l~~~a~----~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~  186 (286)
                      |||||....               +...+++|+.++..+.+++.    +.+ .++|++||............|+.+|...
T Consensus        84 vnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~-g~iI~i~S~~~~~~~~~~~~Y~asKaal  162 (276)
T d1bdba_          84 IPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASR-GNVIFTISNAGFYPNGGGPLYTAAKHAI  162 (276)
T ss_dssp             ECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTSTTSSCHHHHHHHHHH
T ss_pred             cccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcC-CCceeeeechhccCCCCCchHHHHHHHH
Confidence            999985421               23457899999888877663    333 5788888853333334456799999999


Q ss_pred             HHHHHH-----hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHH
Q 023205          187 ETELLT-----RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVR  261 (286)
Q Consensus       187 E~~~~~-----~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~  261 (286)
                      +.+.+.     ..+++++.|.||.+-.+............ ....+.+.....  ..+|+     ..+..++|+|++++.
T Consensus       163 ~~ltr~lA~ela~~IrVN~I~PG~i~T~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~Pl-----gR~g~peeva~~v~f  234 (276)
T d1bdba_         163 VGLVRELAFELAPYVRVNGVGSGGINSDLRGPSSLGMGSK-AISTVPLADMLK--SVLPI-----GRMPEVEEYTGAYVF  234 (276)
T ss_dssp             HHHHHHHHHHHTTTCEEEEEEECCCCSCCCCCGGGC----------CHHHHHT--TTCTT-----SSCCCGGGGSHHHHH
T ss_pred             HHHHHHHHHHhhcceEEcccCCCCEecCcCCccchhhhhh-ccCcHHHHHHHH--hcCCC-----CCCcCHHHHHHHHHH
Confidence            987653     24599999999998654321111000000 000000111111  12332     235678999999998


Q ss_pred             HhcC---CCCCCCeeEecccccc
Q 023205          262 AATD---PVFPPGIVDVHGILRY  281 (286)
Q Consensus       262 ~l~~---~~~~~~~~~l~~~~~~  281 (286)
                      ++..   ....|+++++.|+-.+
T Consensus       235 L~S~~~a~~itG~~i~VDGG~~~  257 (276)
T d1bdba_         235 FATRGDAAPATGALLNYDGGLGV  257 (276)
T ss_dssp             HHCHHHHTTCSSCEEEESSSGGG
T ss_pred             HcCCcccCCeeCcEEEECcChhh
Confidence            8752   2357999999997554

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=99.79  E-value=2.6e-18  Score=144.12  Aligned_cols=212  Identities=14%  Similarity=0.078  Sum_probs=142.6

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc------cccCCceeEEeccCCCHhHHHHHhc-------
Q 023205           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD-------  120 (286)
Q Consensus        54 ~~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~------~~~~~~~~~i~~Dl~d~~~~~~~~~-------  120 (286)
                      ...|+++||||+|.||++++++|+++|++|++++|+.++...      ......+.++.+|++|.++++++++       
T Consensus        23 l~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g  102 (294)
T d1w6ua_          23 FQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAG  102 (294)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhhhcc
Confidence            346899999999999999999999999999999998754211      1224578899999999998876653       


Q ss_pred             CCCEEEEccccCCCc----------chhhhhhhHHHHHHHHHHH----H-cCCCEEEEEecCCcCCCCccccchHHHHHH
Q 023205          121 GVTAVISCVGGFGSN----------SYMYKINGTANINAIRAAS----E-KGVKRFVYISAADFGVANYLLQGYYEGKRA  185 (286)
Q Consensus       121 ~~d~vi~~a~~~~~~----------~~~~~~~~~~~~~l~~~a~----~-~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~  185 (286)
                      ++|+++||||.....          ...+.+|......+...+.    . .+...++.+||............|+.+|..
T Consensus       103 ~iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~~~~~~~~YsasKaa  182 (294)
T d1w6ua_         103 HPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAG  182 (294)
T ss_dssp             SCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTTCHHHHHHHHH
T ss_pred             ccchhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhhhcccccchHHHHHHH
Confidence            689999999875321          2334566666555444332    2 233456666664322333345679999999


Q ss_pred             HHHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHH
Q 023205          186 AETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVA  259 (286)
Q Consensus       186 ~E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~  259 (286)
                      .+.+.+.      ..|+++++|.||.+..+........    .+...+   ...   ..+|+     ..+...+|+|+++
T Consensus       183 l~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~----~~~~~~---~~~---~~~pl-----~R~~~pediA~~v  247 (294)
T d1w6ua_         183 VEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDP----TGTFEK---EMI---GRIPC-----GRLGTVEELANLA  247 (294)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCT----TSHHHH---HHH---TTCTT-----SSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHhHhCeEEEEEccCccccchhhhccCC----cHHHHH---HHh---hcCCC-----CCCCCHHHHHHHH
Confidence            9987753      5789999999999975543211100    011111   111   12232     2467899999999


Q ss_pred             HHHhcCCC--CCCCeeEeccccc
Q 023205          260 VRAATDPV--FPPGIVDVHGILR  280 (286)
Q Consensus       260 ~~~l~~~~--~~~~~~~l~~~~~  280 (286)
                      ..++.+..  ..|+++.+.|+..
T Consensus       248 ~fL~sd~s~~itG~~i~vDGG~~  270 (294)
T d1w6ua_         248 AFLCSDYASWINGAVIKFDGGEE  270 (294)
T ss_dssp             HHHTSGGGTTCCSCEEEESTTHH
T ss_pred             HHHhCchhcCCCCcEEEECCChh
Confidence            99996533  5789999998864

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.79  E-value=5.1e-19  Score=145.05  Aligned_cols=213  Identities=14%  Similarity=0.015  Sum_probs=143.8

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHh-------cCCCEEEEccc
Q 023205           58 KLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEAL-------DGVTAVISCVG  130 (286)
Q Consensus        58 ~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~-------~~~d~vi~~a~  130 (286)
                      +++||||++.||+.+++.|+++|++|++.+|+.+.... .......+..+|++|.+++++++       ..+|++|||||
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~-~~~~~~~~~~~dv~~~~~~~~~~~~~~~~~G~iDiLVnNAg   80 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDE-LEAFAETYPQLKPMSEQEPAELIEAVTSAYGQVDVLVSNDI   80 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHH-HHHHHHHCTTSEECCCCSHHHHHHHHHHHHSCCCEEEEECC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH-HHhhhCcEEEeccCCHHHHHHHHHHHHHHcCCCCEEEECCc
Confidence            68999999999999999999999999999998655221 11112234567888776665554       36899999998


Q ss_pred             cCCC-----------cchhhhhhhHHHHHHHHHHH----HcCCCEEEEEecCCcCCCCccccchHHHHHHHHHHHHH---
Q 023205          131 GFGS-----------NSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLT---  192 (286)
Q Consensus       131 ~~~~-----------~~~~~~~~~~~~~~l~~~a~----~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~~---  192 (286)
                      ....           +...+++|+.+...+.+++.    +.+-.+||++||...-........|+.+|...+.+.+.   
T Consensus        81 ~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~  160 (252)
T d1zmta1          81 FAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGACTLANALSK  160 (252)
T ss_dssp             CCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCTTCHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeecccccccccccccccccccccccHHHHHHHHHH
Confidence            5321           12456789888888777653    44556899999964333334456799999999987653   


Q ss_pred             ---hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcCCC--
Q 023205          193 ---RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDPV--  267 (286)
Q Consensus       193 ---~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~~--  267 (286)
                         ..|+++++|.||.+..+......  +........+......   ..+|+     ..+...+|+|++++.++.+..  
T Consensus       161 ela~~gIrVN~I~PG~i~T~~~~~~~--~~~~~~~~~e~~~~~~---~~~pl-----~R~g~pedvA~~v~fL~S~~s~~  230 (252)
T d1zmta1         161 ELGEYNIPVFAIGPNYLHSEDSPYFY--PTEPWKTNPEHVAHVK---KVTAL-----QRLGTQKELGELVAFLASGSCDY  230 (252)
T ss_dssp             HHGGGTCCEEEEEESSBCCBTCCSSC--BHHHHTTCHHHHHHHH---HHSSS-----SSCBCHHHHHHHHHHHHTTSCGG
T ss_pred             HhcccCcEEEEEecCCCcCcchhhhh--hcccccCCHHHHHHHH---hcCCC-----CCCcCHHHHHHHHHHHhCchhcC
Confidence               67899999999999755432111  0000000011111111   11222     236789999999999996544  


Q ss_pred             CCCCeeEecccccc
Q 023205          268 FPPGIVDVHGILRY  281 (286)
Q Consensus       268 ~~~~~~~l~~~~~~  281 (286)
                      ..|+++.+.|+-.+
T Consensus       231 iTG~~i~vdGG~~~  244 (252)
T d1zmta1         231 LTGQVFWLAGGFPM  244 (252)
T ss_dssp             GTTCEEEESTTCCC
T ss_pred             CcCCeEEECCCcee
Confidence            46899999988654

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.78  E-value=4.7e-18  Score=139.88  Aligned_cols=191  Identities=18%  Similarity=0.164  Sum_probs=137.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCCCccc--c------cccCCceeEEeccCCCHhHHHHHhcC-----
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSL--R------DSWANNVIWHQGNLLSSDSWKEALDG-----  121 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~--~------~~~~~~~~~i~~Dl~d~~~~~~~~~~-----  121 (286)
                      ..+||||||+|.||.+++++|+++|+ +|+++.|+..+..  .      .....++.++.+|++|++++.++++.     
T Consensus         9 ~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i~~~~   88 (259)
T d2fr1a1           9 TGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDDV   88 (259)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTTS
T ss_pred             cCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhccccccc
Confidence            45999999999999999999999998 5888888643211  1      11235789999999999999888753     


Q ss_pred             -CCEEEEccccCCCc----------chhhhhhhHHHHHHHHHHHHcCCCEEEEEecCCcCCCCccccchHHHHHHHHHHH
Q 023205          122 -VTAVISCVGGFGSN----------SYMYKINGTANINAIRAASEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETEL  190 (286)
Q Consensus       122 -~d~vi~~a~~~~~~----------~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~  190 (286)
                       +|.|||+++.....          ...+++|+.+..++.++++..+..+||++||...-........|+.+|...+.+.
T Consensus        89 ~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~iv~~SS~a~~~g~~~~~~YaAaka~l~~la  168 (259)
T d2fr1a1          89 PLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAFGAPGLGGYAPGNAYLDGLA  168 (259)
T ss_dssp             CEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHTCCTTCTTTHHHHHHHHHHH
T ss_pred             cccccccccccccccccccccHHHHHHHhhhhccchhHHHHHhhccCCceEeeecchhhccCCcccHHHHHHHHhHHHHH
Confidence             68999999976422          2456889999999999888777789999999532222334567999999999876


Q ss_pred             HH--hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcCCCC
Q 023205          191 LT--RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDPVF  268 (286)
Q Consensus       191 ~~--~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~~~  268 (286)
                      .+  ..|++++.|.||.+.+++....             .+.....      -   .....++.+++++++..++..+..
T Consensus       169 ~~~~~~Gi~v~~I~pg~~~~~g~~~~-------------~~~~~~~------~---~G~~~~~~~~~~~~l~~~l~~~~~  226 (259)
T d2fr1a1         169 QQRRSDGLPATAVAWGTWAGSGMAEG-------------PVADRFR------R---HGVIEMPPETACRALQNALDRAEV  226 (259)
T ss_dssp             HHHHHTTCCCEEEEECCBC-------------------------CT------T---TTEECBCHHHHHHHHHHHHHTTCS
T ss_pred             HHHHhCCCCEEECCCCcccCCccccc-------------hHHHHHH------h---cCCCCCCHHHHHHHHHHHHhCCCc
Confidence            54  6899999999998876543111             0111111      0   112357899999999999987654

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.78  E-value=7.8e-19  Score=146.43  Aligned_cols=216  Identities=15%  Similarity=0.048  Sum_probs=138.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEE---ecCCCcccc--------cccCCceeEEeccCCCHhHHHHHhc----
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASL---SRSGRSSLR--------DSWANNVIWHQGNLLSSDSWKEALD----  120 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l---~R~~~~~~~--------~~~~~~~~~i~~Dl~d~~~~~~~~~----  120 (286)
                      +|.||||||++.||+++++.|+++|.+|+.+   .|+.+....        .....++..+.+|++|++++.++++    
T Consensus         2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~   81 (285)
T d1jtva_           2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE   81 (285)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT
T ss_pred             CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhccc
Confidence            4567899999999999999999999875544   444322110        1224578999999999999988774    


Q ss_pred             -CCCEEEEccccCCC----------cchhhhhhhHHHHHHHHHH----HHcCCCEEEEEecCCcCCCCccccchHHHHHH
Q 023205          121 -GVTAVISCVGGFGS----------NSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKRA  185 (286)
Q Consensus       121 -~~d~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a----~~~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~  185 (286)
                       .+|++++|++....          ....+++|+.++.++.+++    ++.+-.++|++||...-...+....|+.+|..
T Consensus        82 g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g~~~~~~~~~Y~asKaa  161 (285)
T d1jtva_          82 GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFA  161 (285)
T ss_dssp             SCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCTTCHHHHHHHHH
T ss_pred             cchhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhhcCCCCCchHHHHHHHH
Confidence             37999999986531          2356789999998887765    44555699999996433333445679999999


Q ss_pred             HHHHHHH------hCCCcEEEEeeCeeecCCCCCccccCcccc----CchHHHHHHhcccCCCCCCCCCccCCCccHHHH
Q 023205          186 AETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVI----GSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVV  255 (286)
Q Consensus       186 ~E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dv  255 (286)
                      .+.+...      ..|+++++|.||.+-.+........+.+..    ....+.+.........++.     .....++|+
T Consensus       162 l~~l~~~la~El~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~PeeV  236 (285)
T d1jtva_         162 LEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFR-----EAAQNPEEV  236 (285)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHHHHHH-----HHCBCHHHH
T ss_pred             HHHHHHHHHHHhhccCcEEEEEecCCCCChHHHHhccCHHHHhhccchhHHHHHHHHHHHHhhhhc-----ccCCCHHHH
Confidence            9986642      579999999999986443221111110000    0001111111110011110     124578999


Q ss_pred             HHHHHHHhcCCCCCCCeeEeccc
Q 023205          256 AKVAVRAATDPVFPPGIVDVHGI  278 (286)
Q Consensus       256 a~~~~~~l~~~~~~~~~~~l~~~  278 (286)
                      |++++.+++.+.  ++...+.+.
T Consensus       237 A~~v~~~~~~~~--p~~ry~~g~  257 (285)
T d1jtva_         237 AEVFLTALRAPK--PTLRYFTTE  257 (285)
T ss_dssp             HHHHHHHHHCSS--CCSEEESCS
T ss_pred             HHHHHHHHhCCC--CCeEEecHH
Confidence            999999998765  334455554

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.78  E-value=6.6e-18  Score=138.07  Aligned_cols=154  Identities=16%  Similarity=0.147  Sum_probs=115.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHH---CCCeEEEEecCCCcccc----cccCCceeEEeccCCCHhHHHHHhc--------
Q 023205           56 SEKLLVLGGNGFVGSHICREALD---RGLTVASLSRSGRSSLR----DSWANNVIWHQGNLLSSDSWKEALD--------  120 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~---~g~~V~~l~R~~~~~~~----~~~~~~~~~i~~Dl~d~~~~~~~~~--------  120 (286)
                      ||+||||||++.||..++++|++   +|++|++..|+.++...    .....++.++.+|++|+++++++++        
T Consensus         2 MKtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~   81 (248)
T d1snya_           2 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKD   81 (248)
T ss_dssp             CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGG
T ss_pred             cCEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHhcCCcEEEEEEEeccHHHHHHHHhhhHHHhhc
Confidence            78999999999999999999985   68999999999876321    1124689999999999988776543        


Q ss_pred             -CCCEEEEccccCCC-----------cchhhhhhhHHHHHHHHHHHH----c-----------CCCEEEEEecCCc---C
Q 023205          121 -GVTAVISCVGGFGS-----------NSYMYKINGTANINAIRAASE----K-----------GVKRFVYISAADF---G  170 (286)
Q Consensus       121 -~~d~vi~~a~~~~~-----------~~~~~~~~~~~~~~l~~~a~~----~-----------~v~~~v~~Ss~~~---~  170 (286)
                       .+|++|||||....           ....+++|+.++..+.+++..    .           +..++|++||...   +
T Consensus        82 ~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g~~~~  161 (248)
T d1snya_          82 QGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQG  161 (248)
T ss_dssp             GCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCSTT
T ss_pred             CCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhccccccccccccccccccccccccCC
Confidence             47999999986421           124568999999888776532    1           2458999999521   1


Q ss_pred             CCCccccchHHHHHHHHHHHHH------hCCCcEEEEeeCeeecC
Q 023205          171 VANYLLQGYYEGKRAAETELLT------RYPYGGVILRPGFIYGT  209 (286)
Q Consensus       171 ~~~~~~~~y~~sK~~~E~~~~~------~~g~~~~ilRp~~v~g~  209 (286)
                      ........|+.||.....+.+.      ..|++++.+.||++-.+
T Consensus       162 ~~~~~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~T~  206 (248)
T d1snya_         162 NTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTD  206 (248)
T ss_dssp             CCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCST
T ss_pred             CCCCChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCcccCC
Confidence            2223345799999998886642      57899999999998543

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.78  E-value=5.9e-18  Score=138.92  Aligned_cols=196  Identities=16%  Similarity=0.139  Sum_probs=135.6

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc------cc-cCCceeEEeccCCCHhHHHHHhc------
Q 023205           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DS-WANNVIWHQGNLLSSDSWKEALD------  120 (286)
Q Consensus        54 ~~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~------~~-~~~~~~~i~~Dl~d~~~~~~~~~------  120 (286)
                      ...|++|||||++.||.++++.|+++|++|++..|+.++...      .. ...++.++++|++|+++++++++      
T Consensus         8 lk~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~~~   87 (257)
T d1xg5a_           8 WRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQH   87 (257)
T ss_dssp             GTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHHhc
Confidence            346899999999999999999999999999999998654211      11 12478889999999998877654      


Q ss_pred             -CCCEEEEccccCCC----------cchhhhhhhHHHHHHHHHH----HHcC--CCEEEEEecCCc--CCCCccccchHH
Q 023205          121 -GVTAVISCVGGFGS----------NSYMYKINGTANINAIRAA----SEKG--VKRFVYISAADF--GVANYLLQGYYE  181 (286)
Q Consensus       121 -~~d~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a----~~~~--v~~~v~~Ss~~~--~~~~~~~~~y~~  181 (286)
                       ++|++|||||....          +...+++|+.+...+.+++    ++.+  -.++|++||...  +.+......|+.
T Consensus        88 g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~p~~~~~~Y~~  167 (257)
T d1xg5a_          88 SGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSA  167 (257)
T ss_dssp             CCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSCGGGHHHHH
T ss_pred             CCCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCCCCCcccHHHHH
Confidence             58999999986521          2356688988888776665    3333  358999999532  222334556999


Q ss_pred             HHHHHHHHHH--------HhCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHH
Q 023205          182 GKRAAETELL--------TRYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVT  253 (286)
Q Consensus       182 sK~~~E~~~~--------~~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~  253 (286)
                      +|...+.+.+        ...++++++|.||.+-.+.....       .....+.+...      +|.     ..+...+
T Consensus       168 sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~~~~~~-------~~~~~~~~~~~------~~~-----~r~~~pe  229 (257)
T d1xg5a_         168 TKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKL-------HDKDPEKAAAT------YEQ-----MKCLKPE  229 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHH-------TTTCHHHHHHH------HC--------CBCHH
T ss_pred             HHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCChhhhhc-------ChhhHHHHHhc------CCC-----CCCcCHH
Confidence            9999998663        24689999999987743221000       01111111111      111     2467899


Q ss_pred             HHHHHHHHHhcCCC
Q 023205          254 VVAKVAVRAATDPV  267 (286)
Q Consensus       254 Dva~~~~~~l~~~~  267 (286)
                      |+|++++.++..+.
T Consensus       230 dvA~~v~fL~s~~a  243 (257)
T d1xg5a_         230 DVAEAVIYVLSTPA  243 (257)
T ss_dssp             HHHHHHHHHHHSCT
T ss_pred             HHHHHHHHHhCChh
Confidence            99999999987654

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.76  E-value=2.6e-17  Score=134.49  Aligned_cols=205  Identities=13%  Similarity=0.151  Sum_probs=142.7

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc--cccCCceeEEeccCCCHhHHHHHhc-------CCCE
Q 023205           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSWANNVIWHQGNLLSSDSWKEALD-------GVTA  124 (286)
Q Consensus        54 ~~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~--~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d~  124 (286)
                      .++|+++||||++.||.+++++|+++|++|++++|+.++...  +....+......|+.+.+.++..+.       ..|.
T Consensus         3 lkGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (248)
T d2o23a1           3 VKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVDV   82 (248)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCcccccccccccccccccccccccccccccc
Confidence            357899999999999999999999999999999999766322  2234578888999998876665543       4688


Q ss_pred             EEEccccCC----------------CcchhhhhhhHHHHHHHHHHHHc----------CCCEEEEEecCCcCCCCccccc
Q 023205          125 VISCVGGFG----------------SNSYMYKINGTANINAIRAASEK----------GVKRFVYISAADFGVANYLLQG  178 (286)
Q Consensus       125 vi~~a~~~~----------------~~~~~~~~~~~~~~~l~~~a~~~----------~v~~~v~~Ss~~~~~~~~~~~~  178 (286)
                      ++++++...                .+...+++|+.++.++.+++...          +-.+||++||............
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~~~~~  162 (248)
T d2o23a1          83 AVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAA  162 (248)
T ss_dssp             EEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCTTCHH
T ss_pred             cccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhccCCCCchH
Confidence            888765421                11245689999999888887542          2237999999643233344567


Q ss_pred             hHHHHHHHHHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccH
Q 023205          179 YYEGKRAAETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNV  252 (286)
Q Consensus       179 y~~sK~~~E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v  252 (286)
                      |+.+|...+.+.+.      ..|++++.|.||.+..+.....   +    ....+.+..      .+|+.    ..+...
T Consensus       163 Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~~~~~~---~----~~~~~~~~~------~~pl~----~R~g~p  225 (248)
T d2o23a1         163 YSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSL---P----EKVCNFLAS------QVPFP----SRLGDP  225 (248)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC-----------------CHHHH------TCSSS----CSCBCH
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecchhhcC---C----HHHHHHHHh------cCCCC----CCCcCH
Confidence            99999999997753      5789999999999865432211   0    011111111      22321    235789


Q ss_pred             HHHHHHHHHHhcCCCCCCCeeEe
Q 023205          253 TVVAKVAVRAATDPVFPPGIVDV  275 (286)
Q Consensus       253 ~Dva~~~~~~l~~~~~~~~~~~l  275 (286)
                      +|+|+++..+++.+...|++++|
T Consensus       226 eevA~~v~fL~s~~~itGq~I~v  248 (248)
T d2o23a1         226 AEYAHLVQAIIENPFLNGEVIRL  248 (248)
T ss_dssp             HHHHHHHHHHHHCTTCCSCEEEE
T ss_pred             HHHHHHHHHHHhCCCCCceEeEC
Confidence            99999999999876667777765

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.76  E-value=2.8e-18  Score=143.90  Aligned_cols=196  Identities=14%  Similarity=0.081  Sum_probs=138.0

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc-----------cccCCceeEEeccCCCHhHHHHHh----
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----------DSWANNVIWHQGNLLSSDSWKEAL----  119 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~-----------~~~~~~~~~i~~Dl~d~~~~~~~~----  119 (286)
                      ..|+++||||++.||+.+++.|+++|++|++.+|+.+....           +..........+|+.|.+++++++    
T Consensus         6 ~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~   85 (302)
T d1gz6a_           6 DGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKTAL   85 (302)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHH
Confidence            46899999999999999999999999999999887543211           001123455677888877666554    


Q ss_pred             ---cCCCEEEEccccCCC----------cchhhhhhhHHHHHHHHHHH----HcCCCEEEEEecCCcCCCCccccchHHH
Q 023205          120 ---DGVTAVISCVGGFGS----------NSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEG  182 (286)
Q Consensus       120 ---~~~d~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~----~~~v~~~v~~Ss~~~~~~~~~~~~y~~s  182 (286)
                         .++|++|||||....          +...+++|+.++..+.+++.    +.+-.+||++||...-........|+.+
T Consensus        86 ~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~~~~~~~~~~Y~as  165 (302)
T d1gz6a_          86 DTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFGQANYSAA  165 (302)
T ss_dssp             HHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHH
T ss_pred             HHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhhcCCCCCcHHHHHH
Confidence               368999999996532          23567899999998877764    4455699999995322223345689999


Q ss_pred             HHHHHHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHH
Q 023205          183 KRAAETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVA  256 (286)
Q Consensus       183 K~~~E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva  256 (286)
                      |...+.+.+.      ..|+++++|.||.+-..... .  .     .   +-                 ....+..+|+|
T Consensus       166 Kaal~~lt~~la~E~~~~gIrVN~I~PG~~~t~~~~-~--~-----~---~~-----------------~~~~~~PedvA  217 (302)
T d1gz6a_         166 KLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRMTET-V--M-----P---ED-----------------LVEALKPEYVA  217 (302)
T ss_dssp             HHHHHHHHHHHHHHTGGGTEEEEEEEEECCSTTTGG-G--S-----C---HH-----------------HHHHSCGGGTH
T ss_pred             HHHHHHHHHHHHHHHhccCCceeeeCCCCCCcchhh-c--C-----c---Hh-----------------hHhcCCHHHHH
Confidence            9999987652      57899999999876322110 0  0     0   11                 11234579999


Q ss_pred             HHHHHHhcCCC-CCCCeeEeccc
Q 023205          257 KVAVRAATDPV-FPPGIVDVHGI  278 (286)
Q Consensus       257 ~~~~~~l~~~~-~~~~~~~l~~~  278 (286)
                      .+++.++.... ..|+++.+.|+
T Consensus       218 ~~v~fL~S~~a~itG~~i~vdGG  240 (302)
T d1gz6a_         218 PLVLWLCHESCEENGGLFEVGAG  240 (302)
T ss_dssp             HHHHHHTSTTCCCCSCEEEEETT
T ss_pred             HHHHHHcCCCcCCCCcEEEeCCC
Confidence            99999885433 46788888876

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.75  E-value=1.5e-17  Score=134.83  Aligned_cols=190  Identities=15%  Similarity=0.122  Sum_probs=132.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHH-------hc--CCCEEE
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEA-------LD--GVTAVI  126 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~-------~~--~~d~vi  126 (286)
                      .|+||||||+|.||+++++.|+++|++|.+++|+..+..     .....+..|..+.+..+.+       +.  .+|++|
T Consensus         2 gK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iD~lI   76 (236)
T d1dhra_           2 ARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA-----SASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDAIL   76 (236)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS-----SEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc-----cccceeecccCcHHHHHHHHHHHHHHhCCCCceEEE
Confidence            589999999999999999999999999999998765422     2334445565554443322       22  489999


Q ss_pred             EccccCCC-----------cchhhhhhhHHHHHHHHHHHHc--CCCEEEEEecCCcCCCCccccchHHHHHHHHHHHHH-
Q 023205          127 SCVGGFGS-----------NSYMYKINGTANINAIRAASEK--GVKRFVYISAADFGVANYLLQGYYEGKRAAETELLT-  192 (286)
Q Consensus       127 ~~a~~~~~-----------~~~~~~~~~~~~~~l~~~a~~~--~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~~-  192 (286)
                      ||||....           ....+++|+.++.++.+++...  +-.+||++||...-........|+.+|...+.+.+. 
T Consensus        77 nnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~~~~~~~Y~asKaal~~lt~~l  156 (236)
T d1dhra_          77 CVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGTPGMIGYGMAKGAVHQLCQSL  156 (236)
T ss_dssp             ECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTBHHHHHHHHHHHHHHHHH
T ss_pred             ECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccHHHcCCccCCcccHHHHHHHHHHHHHH
Confidence            99985321           1245688999988888877653  124899999954333334456899999999997763 


Q ss_pred             -------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcC
Q 023205          193 -------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATD  265 (286)
Q Consensus       193 -------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~  265 (286)
                             ..|++++.|.||.+..+..                   +...     |  ......|++.+|+|+.+..++..
T Consensus       157 a~El~~~~~gI~vn~v~PG~v~T~~~-------------------~~~~-----~--~~~~~~~~~pe~va~~~~~l~s~  210 (236)
T d1dhra_         157 AGKNSGMPSGAAAIAVLPVTLDTPMN-------------------RKSM-----P--EADFSSWTPLEFLVETFHDWITG  210 (236)
T ss_dssp             TSTTSSCCTTCEEEEEEESCEECHHH-------------------HHHS-----T--TSCGGGSEEHHHHHHHHHHHHTT
T ss_pred             HHHhccCCCcEEEEEEEeccCcCCcc-------------------hhhC-----c--cchhhcCCCHHHHHHHHHHHhCC
Confidence                   2589999999999964321                   1110     0  01123578899999999999975


Q ss_pred             CC--CCCCeeEec
Q 023205          266 PV--FPPGIVDVH  276 (286)
Q Consensus       266 ~~--~~~~~~~l~  276 (286)
                      ..  ..|..+.+.
T Consensus       211 ~~~~i~G~~i~v~  223 (236)
T d1dhra_         211 NKRPNSGSLIQVV  223 (236)
T ss_dssp             TTCCCTTCEEEEE
T ss_pred             CccCCCCCeEEEE
Confidence            43  356666653

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.75  E-value=7.6e-17  Score=131.84  Aligned_cols=194  Identities=13%  Similarity=0.068  Sum_probs=132.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC--eEEEEecCCCccc--ccccCCceeEEeccCCCHhHHHHHhc---------CC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGL--TVASLSRSGRSSL--RDSWANNVIWHQGNLLSSDSWKEALD---------GV  122 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~--~V~~l~R~~~~~~--~~~~~~~~~~i~~Dl~d~~~~~~~~~---------~~  122 (286)
                      +|+||||||++.||.+++++|+++|+  +|++..|+.++..  .+....++.++.+|++|.++++++++         ++
T Consensus         3 ~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~~i   82 (250)
T d1yo6a1           3 PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDGL   82 (250)
T ss_dssp             CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGCC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHhhCCceEEEEEecCCHHHHHHHHHHHHHHhCCCCe
Confidence            47999999999999999999999995  7888899876532  23345689999999999988776653         38


Q ss_pred             CEEEEccccCCC-----------cchhhhhhhHHHHHHHHHHH----Hc-----------CCCEEEEEecCCc-------
Q 023205          123 TAVISCVGGFGS-----------NSYMYKINGTANINAIRAAS----EK-----------GVKRFVYISAADF-------  169 (286)
Q Consensus       123 d~vi~~a~~~~~-----------~~~~~~~~~~~~~~l~~~a~----~~-----------~v~~~v~~Ss~~~-------  169 (286)
                      |++|||||....           ....+++|+.++..+.+.+.    +.           ...+++.+|+...       
T Consensus        83 dilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~~~  162 (250)
T d1yo6a1          83 SLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTS  162 (250)
T ss_dssp             CEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTTCCS
T ss_pred             EEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceeccccccccccccccCCcc
Confidence            999999996421           12467899999988877653    11           1136788777311       


Q ss_pred             CCCCccccchHHHHHHHHHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCC
Q 023205          170 GVANYLLQGYYEGKRAAETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVG  243 (286)
Q Consensus       170 ~~~~~~~~~y~~sK~~~E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  243 (286)
                      +....+...|+.||.....+.+.      ..|++++.+.||++-.+...                               
T Consensus       163 ~~~~~~~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v~T~m~~-------------------------------  211 (250)
T d1yo6a1         163 GSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGG-------------------------------  211 (250)
T ss_dssp             TTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC-------------------------------------
T ss_pred             cccchhHHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCCCCCC-------------------------------
Confidence            12223345699999999886642      57899999999988532110                               


Q ss_pred             CccCCCccHHHHHHHHHHHhcCCC--CCCCeeEecccccccc
Q 023205          244 PLFTPPVNVTVVAKVAVRAATDPV--FPPGIVDVHGILRYSQ  283 (286)
Q Consensus       244 ~~~~~~i~v~Dva~~~~~~l~~~~--~~~~~~~l~~~~~~s~  283 (286)
                        ....++.++.++.++..+....  ..|+.|+. +.+++-|
T Consensus       212 --~~~~~~~e~~a~~~~~~~~~~~~~~sG~f~~~-~g~p~~w  250 (250)
T d1yo6a1         212 --KNAALTVEQSTAELISSFNKLDNSHNGRFFMR-NLKPYEF  250 (250)
T ss_dssp             ---------HHHHHHHHHHHTTCCGGGTTCEEET-TEEECCC
T ss_pred             --CCCCCCHHHHHHHHHHHHhcCCCCCCeEEECC-CCeeCCC
Confidence              0113567899998888887533  34666654 4455554

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.73  E-value=1.7e-17  Score=136.42  Aligned_cols=208  Identities=13%  Similarity=0.004  Sum_probs=140.9

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHH---CCCeEEEEecCCCcccc-------cccCCceeEEeccCCCHhHHHHHhc----
Q 023205           55 PSEKLLVLGGNGFVGSHICREALD---RGLTVASLSRSGRSSLR-------DSWANNVIWHQGNLLSSDSWKEALD----  120 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~---~g~~V~~l~R~~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~----  120 (286)
                      ..|.++||||++.||..++++|.+   +|++|+++.|+.++...       .....++.++.+|++|+++++++++    
T Consensus         5 ~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~~~   84 (259)
T d1oaaa_           5 GCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRE   84 (259)
T ss_dssp             BSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence            467899999999999999999986   68999999998754211       1123478899999999998887763    


Q ss_pred             -------CCCEEEEccccCCC-------------cchhhhhhhHHHHHHHHHHHHcC------CCEEEEEecCCcCCCCc
Q 023205          121 -------GVTAVISCVGGFGS-------------NSYMYKINGTANINAIRAASEKG------VKRFVYISAADFGVANY  174 (286)
Q Consensus       121 -------~~d~vi~~a~~~~~-------------~~~~~~~~~~~~~~l~~~a~~~~------v~~~v~~Ss~~~~~~~~  174 (286)
                             ..|++++|||....             +...+++|+.++..+.+++...-      -.++|++||...-....
T Consensus        85 ~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~~~~~~  164 (259)
T d1oaaa_          85 LPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYK  164 (259)
T ss_dssp             SCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSCCT
T ss_pred             hhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCcccccccccccccCCCc
Confidence                   35789999885421             12467899999999999886542      23799999953333334


Q ss_pred             cccchHHHHHHHHHHHH----HhCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCc
Q 023205          175 LLQGYYEGKRAAETELL----TRYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPV  250 (286)
Q Consensus       175 ~~~~y~~sK~~~E~~~~----~~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i  250 (286)
                      ....|+.+|...+.+.+    +..|++++.|.||.+..+..........  .....+.+....      +     ...+.
T Consensus       165 ~~~~Y~asKaal~~lt~~la~e~~gIrVn~v~PG~i~T~~~~~~~~~~~--~~~~~~~~~~~~------~-----~~r~~  231 (259)
T d1oaaa_         165 GWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDNDMQQLARETSK--DPELRSKLQKLK------S-----DGALV  231 (259)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSHHHHHHHHHCS--CHHHHHHHHHHH------H-----TTCSB
T ss_pred             cchHHHHHHHHHHHHHHHHHhCCCCCEEEEEEcCCCCCHHHHHhhhcCC--CHHHHHHHHhcC------C-----CCCCC
Confidence            56789999999988664    3678999999999986442110000000  000111111111      1     12347


Q ss_pred             cHHHHHHHHHHHhcCCC-CCCCeeEe
Q 023205          251 NVTVVAKVAVRAATDPV-FPPGIVDV  275 (286)
Q Consensus       251 ~v~Dva~~~~~~l~~~~-~~~~~~~l  275 (286)
                      .++|+|++++.++.+.. ..|+.+++
T Consensus       232 ~p~evA~~i~~ll~~~s~~TG~~idv  257 (259)
T d1oaaa_         232 DCGTSAQKLLGLLQKDTFQSGAHVDF  257 (259)
T ss_dssp             CHHHHHHHHHHHHHHCCSCTTEEEET
T ss_pred             CHHHHHHHHHHHhhhccCCCCCeEEe
Confidence            88999999999986544 34555554

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.72  E-value=2.3e-17  Score=133.74  Aligned_cols=191  Identities=17%  Similarity=0.147  Sum_probs=130.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHH-------HHh--cCCCEEEE
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWK-------EAL--DGVTAVIS  127 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~-------~~~--~~~d~vi~  127 (286)
                      .|||||||+|.||++++++|+++|++|++++|++.+..     .....+.+|..+.+...       ..+  ..+|++||
T Consensus         3 gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iD~lin   77 (235)
T d1ooea_           3 GKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA-----DSNILVDGNKNWTEQEQSILEQTASSLQGSQVDGVFC   77 (235)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS-----SEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhcc-----cccceeccccCchhHHHHHHHHHHHHhcCCCeeEEEE
Confidence            47999999999999999999999999999999876422     23344556665543322       222  34899999


Q ss_pred             ccccCCC-----------cchhhhhhhHHHHHHHHHHHHcC--CCEEEEEecCCcCCCCccccchHHHHHHHHHHHHH--
Q 023205          128 CVGGFGS-----------NSYMYKINGTANINAIRAASEKG--VKRFVYISAADFGVANYLLQGYYEGKRAAETELLT--  192 (286)
Q Consensus       128 ~a~~~~~-----------~~~~~~~~~~~~~~l~~~a~~~~--v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~~--  192 (286)
                      |||....           ....+++|+.++..+.+++...-  -.++|++||.......+....|+.+|...+.+.+.  
T Consensus        78 nAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~l~~~la  157 (235)
T d1ooea_          78 VAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPTPSMIGYGMAKAAVHHLTSSLA  157 (235)
T ss_dssp             CCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTBHHHHHHHHHHHHHHHHHH
T ss_pred             CCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccHHhcCCcccccchHHHHHHHHHHHHHHH
Confidence            9985321           12346888888888888776531  24899999954333334467899999999997653  


Q ss_pred             ------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcCC
Q 023205          193 ------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDP  266 (286)
Q Consensus       193 ------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~  266 (286)
                            ..+++++.+.||.+-.+.                  .....      +  ......|++.+|+++.++..+..+
T Consensus       158 ~e~~~~~~~i~v~~i~Pg~~~T~~------------------~~~~~------~--~~~~~~~~~~~~va~~~~~~l~~~  211 (235)
T d1ooea_         158 AKDSGLPDNSAVLTIMPVTLDTPM------------------NRKWM------P--NADHSSWTPLSFISEHLLKWTTET  211 (235)
T ss_dssp             STTSSCCTTCEEEEEEESCBCCHH------------------HHHHS------T--TCCGGGCBCHHHHHHHHHHHHHCG
T ss_pred             HHhccCCCceEEEEEecCcCcCcc------------------hhhhC------c--CCccccCCCHHHHHHHHHHHhcCc
Confidence                  146788889999874321                  11111      1  011234789999999998766543


Q ss_pred             C---CCCCeeEeccc
Q 023205          267 V---FPPGIVDVHGI  278 (286)
Q Consensus       267 ~---~~~~~~~l~~~  278 (286)
                      .   ..|..+.+...
T Consensus       212 ~~~~~tG~~i~v~~~  226 (235)
T d1ooea_         212 SSRPSSGALLKITTE  226 (235)
T ss_dssp             GGCCCTTCEEEEEEE
T ss_pred             cccCCCceEEEEEee
Confidence            2   45777777443

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=99.72  E-value=1.3e-16  Score=129.70  Aligned_cols=201  Identities=19%  Similarity=0.200  Sum_probs=138.8

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhc------CCCEEEEccc
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD------GVTAVISCVG  130 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~------~~d~vi~~a~  130 (286)
                      |++|||||++.||++++++|+++|++|++.+|+.+.       .+...+++|+.+......+..      ..+.++++++
T Consensus         2 K~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~-------~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (241)
T d1uaya_           2 RSALVTGGASGLGRAAALALKARGYRVVVLDLRREG-------EDLIYVEGDVTREEDVRRAVARAQEEAPLFAVVSAAG   74 (241)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCS-------SSSEEEECCTTCHHHHHHHHHHHHHHSCEEEEEECCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCccc-------ccceEeeccccchhhhHHHHHhhhccccccchhhhhh
Confidence            689999999999999999999999999999998654       356678899998776665543      2355555544


Q ss_pred             cCC--------------CcchhhhhhhHHHHHHHHHHHHc----------CCCEEEEEecCCcCCCCccccchHHHHHHH
Q 023205          131 GFG--------------SNSYMYKINGTANINAIRAASEK----------GVKRFVYISAADFGVANYLLQGYYEGKRAA  186 (286)
Q Consensus       131 ~~~--------------~~~~~~~~~~~~~~~l~~~a~~~----------~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~  186 (286)
                      ...              .....+++|..+...+.+.+...          +-.++|++||...-........|+.+|...
T Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaal  154 (241)
T d1uaya_          75 VGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAYAASKGGV  154 (241)
T ss_dssp             CCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTTCHHHHHHHHHH
T ss_pred             ccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhccCCCCchhhHHHHHHH
Confidence            221              11245678888877776665332          223899999963222334456899999999


Q ss_pred             HHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHH
Q 023205          187 ETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAV  260 (286)
Q Consensus       187 E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~  260 (286)
                      +.+.+.      ..|++++.|.||.+..+.....          ..+.......   ..|..    ..+...+|+|+++.
T Consensus       155 ~~lt~~lA~ela~~gIrVN~V~PG~i~T~~~~~~----------~~~~~~~~~~---~~~~~----~R~g~pedvA~~v~  217 (241)
T d1uaya_         155 VALTLPAARELAGWGIRVVTVAPGLFDTPLLQGL----------PEKAKASLAA---QVPFP----PRLGRPEEYAALVL  217 (241)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTS----------CHHHHHHHHT---TCCSS----CSCCCHHHHHHHHH
T ss_pred             HHHHHHHHHHHhhcCCceeeecCCcccccccchh----------hhhHHHHHHh---cCCCC----CCCcCHHHHHHHHH
Confidence            987753      5789999999999864322111          1111111111   12221    23568999999999


Q ss_pred             HHhcCCCCCCCeeEecccccc
Q 023205          261 RAATDPVFPPGIVDVHGILRY  281 (286)
Q Consensus       261 ~~l~~~~~~~~~~~l~~~~~~  281 (286)
                      .++......|+++.+.|+..+
T Consensus       218 fL~s~~~iTG~~i~VDGG~~m  238 (241)
T d1uaya_         218 HILENPMLNGEVVRLDGALRM  238 (241)
T ss_dssp             HHHHCTTCCSCEEEESTTCCC
T ss_pred             HHHhCCCCCCCEEEECCcccC
Confidence            999876678999999988654

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=99.72  E-value=3.4e-16  Score=130.26  Aligned_cols=209  Identities=15%  Similarity=0.102  Sum_probs=139.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc-------cccCCc-----------------eeEEeccCCC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-------DSWANN-----------------VIWHQGNLLS  111 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~-------~~~~~~-----------------~~~i~~Dl~d  111 (286)
                      ++.++||||++.||+++++.|+++|++|++..|+..+...       ......                 +....+|+++
T Consensus         2 ~pVAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~   81 (284)
T d1e7wa_           2 VPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTL   81 (284)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCCC
Confidence            4578999999999999999999999999998887543211       111122                 3345566888


Q ss_pred             HhHHHHHh-------cCCCEEEEccccCCCc------------------------chhhhhhhHHHHHHHHHHHHc----
Q 023205          112 SDSWKEAL-------DGVTAVISCVGGFGSN------------------------SYMYKINGTANINAIRAASEK----  156 (286)
Q Consensus       112 ~~~~~~~~-------~~~d~vi~~a~~~~~~------------------------~~~~~~~~~~~~~l~~~a~~~----  156 (286)
                      .+++++++       ..+|++|||||.....                        ...+.+|..+...+.+++.+.    
T Consensus        82 ~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~  161 (284)
T d1e7wa_          82 FTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGT  161 (284)
T ss_dssp             HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHHHhCCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhhhh
Confidence            88777765       3689999999865211                        014567777777777765431    


Q ss_pred             ------CCCEEEEEecCCcCCCCccccchHHHHHHHHHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCc
Q 023205          157 ------GVKRFVYISAADFGVANYLLQGYYEGKRAAETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGS  224 (286)
Q Consensus       157 ------~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~  224 (286)
                            +..++++++|............|+.+|...+.+.+.      ..|++++.|.||.+-.....     +    ..
T Consensus       162 ~~~~~~~~~~ii~~~s~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~t~~~~~~-----~----~~  232 (284)
T d1e7wa_         162 PAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDDM-----P----PA  232 (284)
T ss_dssp             CGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGGGS-----C----HH
T ss_pred             HHHhcCCCCcccccccccccCCccceeeeccccccchhhhHHHHHHhCCccccccccccccccccccC-----C----HH
Confidence                  223678888865555555567899999999987753      57899999999964211110     0    11


Q ss_pred             hHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcCCC--CCCCeeEecccccccc
Q 023205          225 PMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATDPV--FPPGIVDVHGILRYSQ  283 (286)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~~~--~~~~~~~l~~~~~~s~  283 (286)
                      ..+   ...   ..+|..    ..+...+|+|++++.++....  ..|+++.+.|+..++.
T Consensus       233 ~~~---~~~---~~~pl~----~R~~~peeiA~~v~fL~S~~s~~itG~~i~VDGG~sl~r  283 (284)
T d1e7wa_         233 VWE---GHR---SKVPLY----QRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSLTR  283 (284)
T ss_dssp             HHH---HHH---TTCTTT----TSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCC
T ss_pred             HHH---HHH---hcCCCC----CCCCCHHHHHHHHHHHhCchhcCccCCeEEECcChhccC
Confidence            111   111   122321    235789999999999996533  5789999999988764

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=99.71  E-value=2.5e-16  Score=129.28  Aligned_cols=212  Identities=14%  Similarity=0.076  Sum_probs=143.3

Q ss_pred             CCCeEEEEcCCC--hhHHHHHHHHHHCCCeEEEEecCCCcccc----cccCCceeEEeccCCCHhHHHHHhc-------C
Q 023205           55 PSEKLLVLGGNG--FVGSHICREALDRGLTVASLSRSGRSSLR----DSWANNVIWHQGNLLSSDSWKEALD-------G  121 (286)
Q Consensus        55 ~~~~VlVtGatG--~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~----~~~~~~~~~i~~Dl~d~~~~~~~~~-------~  121 (286)
                      ..|+||||||+|  .||+++++.|+++|++|++..|+.+....    .........+..|+.+..+....+.       .
T Consensus         4 ~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (258)
T d1qsga_           4 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWPK   83 (258)
T ss_dssp             TTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCSS
T ss_pred             CCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHhhcCCcceeecccchHHHHHHHHHHhhhcccc
Confidence            478999999998  79999999999999999999998543211    1123467788899998877666553       4


Q ss_pred             CCEEEEccccCCCc---------------chhhhhhhHHHHHHHHHHHHc--CCCEEEEEecCCcCCCCccccchHHHHH
Q 023205          122 VTAVISCVGGFGSN---------------SYMYKINGTANINAIRAASEK--GVKRFVYISAADFGVANYLLQGYYEGKR  184 (286)
Q Consensus       122 ~d~vi~~a~~~~~~---------------~~~~~~~~~~~~~l~~~a~~~--~v~~~v~~Ss~~~~~~~~~~~~y~~sK~  184 (286)
                      .|+++|+++.....               ...+.++..+...+.+.+...  +-+.+|++||.......+....|+.+|.
T Consensus        84 ~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~iss~~~~~~~~~~~~Y~~sKa  163 (258)
T d1qsga_          84 FDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNVMGLAKA  163 (258)
T ss_dssp             EEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTTTTHHHHHHH
T ss_pred             cceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCCcEEEEecchhhccCCCCcHHHHHHHH
Confidence            69999999764211               112345555555556655442  2236888888543333344567999999


Q ss_pred             HHHHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHH
Q 023205          185 AAETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKV  258 (286)
Q Consensus       185 ~~E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~  258 (286)
                      ..+.+.+.      ..|+++++|+||.+..+......        .. +.......  ..+|+     ..+..++|+|++
T Consensus       164 al~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~--------~~-~~~~~~~~--~~~pl-----~R~~~peeia~~  227 (258)
T d1qsga_         164 SLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIK--------DF-RKMLAHCE--AVTPI-----RRTVTIEDVGNS  227 (258)
T ss_dssp             HHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGST--------TH-HHHHHHHH--HHSTT-----SSCCCHHHHHHH
T ss_pred             HHHHHHHHHHHHhCccCceeecccccccccccccccc--------hh-hhHHHHHH--hCCCC-----CCCcCHHHHHHH
Confidence            99987753      57899999999999765432210        11 11111111  11222     236789999999


Q ss_pred             HHHHhcCC--CCCCCeeEeccccccc
Q 023205          259 AVRAATDP--VFPPGIVDVHGILRYS  282 (286)
Q Consensus       259 ~~~~l~~~--~~~~~~~~l~~~~~~s  282 (286)
                      +..++.+.  ...|+++.+.|+..+.
T Consensus       228 v~fL~s~~s~~itG~~i~vDGG~~i~  253 (258)
T d1qsga_         228 AAFLCSDLSAGISGEVVHVDGGFSIA  253 (258)
T ss_dssp             HHHHTSGGGTTCCSCEEEESTTGGGB
T ss_pred             HHHHhCchhcCccCceEEECcCHHHh
Confidence            99999653  3578999999986553

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.68  E-value=5e-16  Score=128.66  Aligned_cols=151  Identities=17%  Similarity=0.037  Sum_probs=112.2

Q ss_pred             eEEEEcCCChhHHHHHHHHHHC-CCeEEEEecCCCcccc-----cccCCceeEEeccCCCHhHHHHHhc-------CCCE
Q 023205           58 KLLVLGGNGFVGSHICREALDR-GLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------GVTA  124 (286)
Q Consensus        58 ~VlVtGatG~iG~~l~~~Ll~~-g~~V~~l~R~~~~~~~-----~~~~~~~~~i~~Dl~d~~~~~~~~~-------~~d~  124 (286)
                      .+|||||++.||..++++|+++ |++|++..|+.++...     .....++.++++|++|.++++++++       .+|+
T Consensus         5 VAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g~iDi   84 (275)
T d1wmaa1           5 VALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGGLDV   84 (275)
T ss_dssp             EEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSSEEE
T ss_pred             EEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhcCCcEE
Confidence            4489999999999999999986 8999999999765211     1224578999999999998876653       5899


Q ss_pred             EEEccccCCC----------cchhhhhhhHHHHHHHHHHHHcC--CCEEEEEecCCc-----------------------
Q 023205          125 VISCVGGFGS----------NSYMYKINGTANINAIRAASEKG--VKRFVYISAADF-----------------------  169 (286)
Q Consensus       125 vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~~~~--v~~~v~~Ss~~~-----------------------  169 (286)
                      +|||||....          ....+++|+.++..+.+.+...-  -.++|++||...                       
T Consensus        85 LVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnisS~~~~~~~~~~~~y~~~k~~~~~~~~~  164 (275)
T d1wmaa1          85 LVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSETITEE  164 (275)
T ss_dssp             EEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHHHCSSCCHH
T ss_pred             EEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccceeccccccchhhhhhhcccccchh
Confidence            9999997532          12467899999999988886431  238999998410                       


Q ss_pred             ------------------CCCCccccchHHHHHHHHHHHHH----------hCCCcEEEEeeCeeec
Q 023205          170 ------------------GVANYLLQGYYEGKRAAETELLT----------RYPYGGVILRPGFIYG  208 (286)
Q Consensus       170 ------------------~~~~~~~~~y~~sK~~~E~~~~~----------~~g~~~~ilRp~~v~g  208 (286)
                                        .....+...|+.+|.....+.+.          ..++.++.+.||++-.
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~v~T  231 (275)
T d1wmaa1         165 ELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRT  231 (275)
T ss_dssp             HHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCS
T ss_pred             hhccccccchhcccccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecccccC
Confidence                              01112345699999987764421          2589999999999853

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=99.65  E-value=8.8e-15  Score=120.95  Aligned_cols=210  Identities=13%  Similarity=0.040  Sum_probs=134.1

Q ss_pred             CCCeEEEEcCCC--hhHHHHHHHHHHCCCeEEEEecCCCcccc----cccCCceeEEeccCCCHhHHHHHh-------cC
Q 023205           55 PSEKLLVLGGNG--FVGSHICREALDRGLTVASLSRSGRSSLR----DSWANNVIWHQGNLLSSDSWKEAL-------DG  121 (286)
Q Consensus        55 ~~~~VlVtGatG--~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~----~~~~~~~~~i~~Dl~d~~~~~~~~-------~~  121 (286)
                      ..|++|||||+|  .||.++++.|+++|++|+++.|+.+....    ........++..|+++.+++.+++       ..
T Consensus         4 ~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g~   83 (274)
T d2pd4a1           4 KGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLGS   83 (274)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSC
T ss_pred             CCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHHHcCC
Confidence            468999999987  79999999999999999999998542111    112346778899999988777665       35


Q ss_pred             CCEEEEccccCCCc----------chhh----hhhhHHHHHHHHHHHHc-CCCE-EEEEecCCcCCCCccccchHHHHHH
Q 023205          122 VTAVISCVGGFGSN----------SYMY----KINGTANINAIRAASEK-GVKR-FVYISAADFGVANYLLQGYYEGKRA  185 (286)
Q Consensus       122 ~d~vi~~a~~~~~~----------~~~~----~~~~~~~~~l~~~a~~~-~v~~-~v~~Ss~~~~~~~~~~~~y~~sK~~  185 (286)
                      +|++|||++.....          ...+    ..+......+.....+. +... ++.+|+............|+.+|..
T Consensus        84 id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~~~~~~~y~asK~a  163 (274)
T d2pd4a1          84 LDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYMAHYNVMGLAKAA  163 (274)
T ss_dssp             EEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTTCHHHHHHHHH
T ss_pred             CCeEEeecccccccccccccccccchhhhhhhccccccccccccccccccccCcceeeecccccccccccchhhhHHHHH
Confidence            79999999865311          0111    11222222233333222 2223 4555554333334445679999999


Q ss_pred             HHHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCccCCCccHHHHHHHH
Q 023205          186 AETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVA  259 (286)
Q Consensus       186 ~E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~  259 (286)
                      .+.+.+.      ..|++++++.||.+..+.....        ... +.........  .|     ...+...+|+|+++
T Consensus       164 l~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~~~~--------~~~-~~~~~~~~~~--~p-----~~r~~~pedIA~~v  227 (274)
T d2pd4a1         164 LESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGI--------ADF-RMILKWNEIN--AP-----LRKNVSLEEVGNAG  227 (274)
T ss_dssp             HHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGS--------TTH-HHHHHHHHHH--ST-----TSSCCCHHHHHHHH
T ss_pred             HHHHHHhhHHHhcCcCceecccccCcccCcccccc--------Cch-HHHHHHHhhh--hh-----ccCCcCHHHHHHHH
Confidence            9987753      5789999999999876543211        010 1111111110  11     12457899999999


Q ss_pred             HHHhcCCC--CCCCeeEeccccc
Q 023205          260 VRAATDPV--FPPGIVDVHGILR  280 (286)
Q Consensus       260 ~~~l~~~~--~~~~~~~l~~~~~  280 (286)
                      ..++.+..  ..|+++.+.|+..
T Consensus       228 ~fL~S~~s~~itG~~i~vDGG~~  250 (274)
T d2pd4a1         228 MYLLSSLSSGVSGEVHFVDAGYH  250 (274)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHhChhhCCCcCceEEECCChh
Confidence            99997533  5688999998764

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.65  E-value=1.5e-15  Score=125.32  Aligned_cols=153  Identities=17%  Similarity=0.108  Sum_probs=114.3

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc------cccCCceeEEeccCCCHhHHHHHh-------cC
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEAL-------DG  121 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~------~~~~~~~~~i~~Dl~d~~~~~~~~-------~~  121 (286)
                      ..|++|||||+++||++++++|+++|++|+++.|+.++...      ......+..+.+|+.+.+.....+       ..
T Consensus        13 ~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g~   92 (269)
T d1xu9a_          13 QGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGG   92 (269)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHTS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHhCC
Confidence            46899999999999999999999999999999998754211      123457888999998877665544       36


Q ss_pred             CCEEEEccccCCC----------cchhhhhhhHHHHHHHHHHHH---cCCCEEEEEecCCcCCCCccccchHHHHHHHHH
Q 023205          122 VTAVISCVGGFGS----------NSYMYKINGTANINAIRAASE---KGVKRFVYISAADFGVANYLLQGYYEGKRAAET  188 (286)
Q Consensus       122 ~d~vi~~a~~~~~----------~~~~~~~~~~~~~~l~~~a~~---~~v~~~v~~Ss~~~~~~~~~~~~y~~sK~~~E~  188 (286)
                      +|++++||+....          ....+++|+.++..+.+.+..   .+-.++|++||.......+....|+.+|+..+.
T Consensus        93 ~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~~G~ii~isS~~~~~~~p~~~~Y~asKaal~~  172 (269)
T d1xu9a_          93 LDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALDG  172 (269)
T ss_dssp             CSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSCCTTCHHHHHHHHHHHH
T ss_pred             ccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhcCCcceEeccchhcCCCCCchHHHHHHHHHHH
Confidence            8999999986531          124568899888877666532   122589999996433333456789999999988


Q ss_pred             HHHH--------hCCCcEEEEeeCeee
Q 023205          189 ELLT--------RYPYGGVILRPGFIY  207 (286)
Q Consensus       189 ~~~~--------~~g~~~~ilRp~~v~  207 (286)
                      +.+.        ..+++++.+.||.+-
T Consensus       173 ~~~~La~El~~~~~~I~V~~v~PG~v~  199 (269)
T d1xu9a_         173 FFSSIRKEYSVSRVNVSITLCVLGLID  199 (269)
T ss_dssp             HHHHHHHHHHHHTCCCEEEEEEECCBC
T ss_pred             HHHHHHHHhhhcCCCEEEEEEecCcCC
Confidence            6642        256899999999885

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=99.64  E-value=1.6e-15  Score=125.09  Aligned_cols=222  Identities=14%  Similarity=0.054  Sum_probs=137.1

Q ss_pred             CCCeEEEEcCCC--hhHHHHHHHHHHCCCeEEEEecCCCccc---ccccCCceeEEeccCCCHhHHHHHhc---------
Q 023205           55 PSEKLLVLGGNG--FVGSHICREALDRGLTVASLSRSGRSSL---RDSWANNVIWHQGNLLSSDSWKEALD---------  120 (286)
Q Consensus        55 ~~~~VlVtGatG--~iG~~l~~~Ll~~g~~V~~l~R~~~~~~---~~~~~~~~~~i~~Dl~d~~~~~~~~~---------  120 (286)
                      ..|++|||||+|  .||.++++.|+++|++|++..|+..+..   .+....+...+++|+.++++++.+++         
T Consensus         5 ~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~v~~~~~~~   84 (268)
T d2h7ma1           5 DGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIGAG   84 (268)
T ss_dssp             TTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHCTT
T ss_pred             CCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHcCCceeeEeeecccccccccccchhhhccccC
Confidence            468999999765  5999999999999999999999876532   23345578899999999876655532         


Q ss_pred             -CCCEEEEccccCCCc----c-----------hhhhhhhHHHHHHHHHHHHcC-CCEEEEEecCCcCCCCccccchHHHH
Q 023205          121 -GVTAVISCVGGFGSN----S-----------YMYKINGTANINAIRAASEKG-VKRFVYISAADFGVANYLLQGYYEGK  183 (286)
Q Consensus       121 -~~d~vi~~a~~~~~~----~-----------~~~~~~~~~~~~l~~~a~~~~-v~~~v~~Ss~~~~~~~~~~~~y~~sK  183 (286)
                       .+|+++||++.....    .           ..+..+........+.+.... ...++.++|.......+....|+.+|
T Consensus        85 ~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~p~~~~y~~sK  164 (268)
T d2h7ma1          85 NKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSRAMPAYNWMTVAK  164 (268)
T ss_dssp             CCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSSCCTTTHHHHHHH
T ss_pred             CCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhcccccccccccccccccCcccchhhccc
Confidence             369999999854210    0           112334444444444443322 12344454443333344467899999


Q ss_pred             HHHHHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccc-cCchHHHHHHhcccCCCCCCCCCccCCCccHHHHH
Q 023205          184 RAAETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGV-IGSPMEMVLQHAKPLSQLPLVGPLFTPPVNVTVVA  256 (286)
Q Consensus       184 ~~~E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva  256 (286)
                      ...+.+.+.      ..|++++.|.||.+-.+............ .....+.+......  ..|+    ...+..++|+|
T Consensus       165 ~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~pl----~rr~~~p~dva  238 (268)
T d2h7ma1         165 SALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQ--RAPI----GWNMKDATPVA  238 (268)
T ss_dssp             HHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHH--HCTT----CCCTTCCHHHH
T ss_pred             cchhhccccchhhhhccCCcceEEecCCCCChhhhhhccchhhhhhccchHHHHHHHHh--cCCC----CCCCCCHHHHH
Confidence            999997753      57899999999988643211000000000 00011111111110  1111    12356789999


Q ss_pred             HHHHHHhcCC--CCCCCeeEeccccccc
Q 023205          257 KVAVRAATDP--VFPPGIVDVHGILRYS  282 (286)
Q Consensus       257 ~~~~~~l~~~--~~~~~~~~l~~~~~~s  282 (286)
                      +++..++.+.  ...|+++.+.|+.+.+
T Consensus       239 ~~v~fL~Sd~a~~iTG~~i~vDGG~~~~  266 (268)
T d2h7ma1         239 KTVCALLSDWLPATTGDIIYADGGAHTQ  266 (268)
T ss_dssp             HHHHHHHSSSCTTCCSEEEEESTTGGGC
T ss_pred             HHHHHHhCchhcCccCCEEEECcCcccc
Confidence            9999999543  3568899999987643

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=99.64  E-value=1.2e-14  Score=119.60  Aligned_cols=208  Identities=15%  Similarity=0.150  Sum_probs=132.5

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc-------cccCCceeEEeccCCC----HhHHHH-------H
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-------DSWANNVIWHQGNLLS----SDSWKE-------A  118 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~-------~~~~~~~~~i~~Dl~d----~~~~~~-------~  118 (286)
                      ++.|||||++.||+.+++.|+++|++|++++|+.++..+       .........++.|..+    .+.+.+       .
T Consensus         2 ~vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (266)
T d1mxha_           2 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRA   81 (266)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999765321       1223466667666654    233333       2


Q ss_pred             hcCCCEEEEccccCCCcc---------------------hhhhhhhHHHHHHHHHHHHc---------CCCEEEEEecCC
Q 023205          119 LDGVTAVISCVGGFGSNS---------------------YMYKINGTANINAIRAASEK---------GVKRFVYISAAD  168 (286)
Q Consensus       119 ~~~~d~vi~~a~~~~~~~---------------------~~~~~~~~~~~~l~~~a~~~---------~v~~~v~~Ss~~  168 (286)
                      +..+|++|||||......                     ..+..|..............         ....++.+|+..
T Consensus        82 ~g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (266)
T d1mxha_          82 FGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAM  161 (266)
T ss_dssp             HSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECCGG
T ss_pred             hCCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccchhhhhcc
Confidence            346899999998642110                     11233333333333333221         122456666644


Q ss_pred             cCCCCccccchHHHHHHHHHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCC
Q 023205          169 FGVANYLLQGYYEGKRAAETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLV  242 (286)
Q Consensus       169 ~~~~~~~~~~y~~sK~~~E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (286)
                      .....+....|+.+|...+.+.+.      ..|++++.|.||.+..+.....            +......   ..+|+.
T Consensus       162 ~~~~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~~~~~~------------~~~~~~~---~~~pl~  226 (266)
T d1mxha_         162 TDLPLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAMPQ------------ETQEEYR---RKVPLG  226 (266)
T ss_dssp             GGSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCSSSCH------------HHHHHHH---TTCTTT
T ss_pred             ccccCcchhhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEeccccCCH------------HHHHHHH---hcCCCC
Confidence            333444567899999999987653      5789999999998864432111            1111111   122321


Q ss_pred             CCccCCCccHHHHHHHHHHHhcCCC--CCCCeeEecccccccc
Q 023205          243 GPLFTPPVNVTVVAKVAVRAATDPV--FPPGIVDVHGILRYSQ  283 (286)
Q Consensus       243 g~~~~~~i~v~Dva~~~~~~l~~~~--~~~~~~~l~~~~~~s~  283 (286)
                          ..+...+|+|++++.++.+..  ..|+++.+.|+..++.
T Consensus       227 ----r~~~~peeva~~v~fL~s~~s~~itG~~i~vDGG~~l~~  265 (266)
T d1mxha_         227 ----QSEASAAQIADAIAFLVSKDAGYITGTTLKVDGGLILAR  265 (266)
T ss_dssp             ----SCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCC
T ss_pred             ----CCCCCHHHHHHHHHHHhCchhCCccCCeEEECccHhhhC
Confidence                224689999999999997643  5789999999877653

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.59  E-value=2.4e-13  Score=111.04  Aligned_cols=197  Identities=13%  Similarity=0.083  Sum_probs=121.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHh--------cCCCEEEE
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEAL--------DGVTAVIS  127 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~--------~~~d~vi~  127 (286)
                      ||.|+||||++.||++++++|+++|++|++++|+..+.            ..|+.+.+......        ..+|++++
T Consensus         1 mkVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~~------------~~d~~~~~~~~~~~~~~~~~~~~~id~lv~   68 (257)
T d1fjha_           1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEV------------IADLSTAEGRKQAIADVLAKCSKGMDGLVL   68 (257)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSE------------ECCTTSHHHHHHHHHHHHTTCTTCCSEEEE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHHH------------HHHhcCHHHHHHHHHHHHHHhCCCCcEEEE
Confidence            57899999999999999999999999999999986442            35676665444332        24899999


Q ss_pred             ccccCCCc---chhhhhhhHHHHHHHHHH----HHcCCCEEEEEecCCcCC----------------------------C
Q 023205          128 CVGGFGSN---SYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGV----------------------------A  172 (286)
Q Consensus       128 ~a~~~~~~---~~~~~~~~~~~~~l~~~a----~~~~v~~~v~~Ss~~~~~----------------------------~  172 (286)
                      +|+.....   .....+|..+...+.+..    .+........+++.....                            .
T Consensus        69 ~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~i~s~~~~~~~  148 (257)
T d1fjha_          69 CAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGE  148 (257)
T ss_dssp             CCCCCTTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHHHHHTCCT
T ss_pred             cCCCCCcHHHHHHHHHHHHHHHHHHHHHhhhhhhhhccCcceeeeeccccchhhhhhhhhhhccCCcEEEEeeehhccCC
Confidence            99865332   233455666655554433    333444555555421000                            0


Q ss_pred             CccccchHHHHHHHHHHHHH------hCCCcEEEEeeCeeecCCCCCccccCccccCchHHHHHHhcccCCCCCCCCCcc
Q 023205          173 NYLLQGYYEGKRAAETELLT------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQHAKPLSQLPLVGPLF  246 (286)
Q Consensus       173 ~~~~~~y~~sK~~~E~~~~~------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  246 (286)
                      ......|+.+|...+.+.+.      ..|++++.|.||.+-.+.....+..     .   +......+  ...|+     
T Consensus       149 ~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~-----~---~~~~~~~~--~~~Pl-----  213 (257)
T d1fjha_         149 QGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQD-----P---RYGESIAK--FVPPM-----  213 (257)
T ss_dssp             THHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC-------------------------------CCCST-----
T ss_pred             CcchHHHHHHhhhhhccccccccccccccccccccccCCcCChhHHhhcCC-----H---HHHHHHHh--cCCCC-----
Confidence            11123599999999987753      6799999999999965532211100     0   00000011  01122     


Q ss_pred             CCCccHHHHHHHHHHHhcCC--CCCCCeeEecccc
Q 023205          247 TPPVNVTVVAKVAVRAATDP--VFPPGIVDVHGIL  279 (286)
Q Consensus       247 ~~~i~v~Dva~~~~~~l~~~--~~~~~~~~l~~~~  279 (286)
                      ..+...+|+|+++..++...  ...|+++.+.|+-
T Consensus       214 gR~g~p~eva~~v~fL~S~~s~~itG~~i~vDGG~  248 (257)
T d1fjha_         214 GRRAEPSEMASVIAFLMSPAASYVHGAQIVIDGGI  248 (257)
T ss_dssp             TSCCCTHHHHHHHHHHTSGGGTTCCSCEEEESTTH
T ss_pred             CCCcCHHHHHHHHHHHhCchhCCccCceEEeCCCc
Confidence            24578899999999998543  3578999998863

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.57  E-value=1.6e-13  Score=114.53  Aligned_cols=210  Identities=7%  Similarity=-0.012  Sum_probs=131.8

Q ss_pred             CCCeEEEEcCCC--hhHHHHHHHHHHCCCeEEEEecCCCcc------------ccccc----CC---ceeEEeccCC---
Q 023205           55 PSEKLLVLGGNG--FVGSHICREALDRGLTVASLSRSGRSS------------LRDSW----AN---NVIWHQGNLL---  110 (286)
Q Consensus        55 ~~~~VlVtGatG--~iG~~l~~~Ll~~g~~V~~l~R~~~~~------------~~~~~----~~---~~~~i~~Dl~---  110 (286)
                      ..|++|||||+|  .||..++++|+++|++|++..|++...            .....    ..   ++..+..++.   
T Consensus         7 ~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (297)
T d1d7oa_           7 RGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFDNPE   86 (297)
T ss_dssp             TTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCCSGG
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhhccccc
Confidence            468999999987  899999999999999999998863210            00000    00   1222222221   


Q ss_pred             ---------------CH---h----HHHHHhcCCCEEEEccccCCC------------cchhhhhhhHHHHHHHHHHHHc
Q 023205          111 ---------------SS---D----SWKEALDGVTAVISCVGGFGS------------NSYMYKINGTANINAIRAASEK  156 (286)
Q Consensus       111 ---------------d~---~----~~~~~~~~~d~vi~~a~~~~~------------~~~~~~~~~~~~~~l~~~a~~~  156 (286)
                                     +.   +    .+.+.+.++|++|||||....            +...+++|+.+...+.+++...
T Consensus        87 ~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~  166 (297)
T d1d7oa_          87 DVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPI  166 (297)
T ss_dssp             GSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred             cchhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhcccccccccchhhhhhhhhhHHHHH
Confidence                           11   1    222334578999999986321            1245678999998888887654


Q ss_pred             CC--CEEEEEecCC-cCCCCccccchHHHHHHHHHHHHH-------hCCCcEEEEeeCeeecCCCCCccccCccccCchH
Q 023205          157 GV--KRFVYISAAD-FGVANYLLQGYYEGKRAAETELLT-------RYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPM  226 (286)
Q Consensus       157 ~v--~~~v~~Ss~~-~~~~~~~~~~y~~sK~~~E~~~~~-------~~g~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~  226 (286)
                      ..  ...+.+++.. ..........|..+|...+.+.+.       ..|++++.|.||.+..+......         ..
T Consensus       167 ~~~~g~~~~~~~~~~~~~~~~~~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~i~T~~~~~~~---------~~  237 (297)
T d1d7oa_         167 MNPGGASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIG---------FI  237 (297)
T ss_dssp             EEEEEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCS---------HH
T ss_pred             hhcCCcceeeeehhhcccccccccceecccccccccccccchhccccceEEecccccccccchhhhhcc---------CC
Confidence            32  2455555532 223334556799999988876542       46899999999999766543211         11


Q ss_pred             HHHHHhcccCCCCCCCCCccCCCccHHHHHHHHHHHhcC--CCCCCCeeEeccccc
Q 023205          227 EMVLQHAKPLSQLPLVGPLFTPPVNVTVVAKVAVRAATD--PVFPPGIVDVHGILR  280 (286)
Q Consensus       227 ~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~~~~~~l~~--~~~~~~~~~l~~~~~  280 (286)
                      +-+......  ..|+     ..+...+|+|++++.++..  ....|+++.+.|+..
T Consensus       238 ~~~~~~~~~--~~Pl-----gR~~~peevA~~v~fL~S~~a~~itGq~i~vDGG~s  286 (297)
T d1d7oa_         238 DTMIEYSYN--NAPI-----QKTLTADEVGNAAAFLVSPLASAITGATIYVDNGLN  286 (297)
T ss_dssp             HHHHHHHHH--HSSS-----CCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHHHh--CCCC-----CCCCCHHHHHHHHHHHhCchhcCCcCceEEECcCHh
Confidence            111111111  1232     2467899999999999964  335789999988753

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.47  E-value=8.9e-13  Score=111.54  Aligned_cols=152  Identities=11%  Similarity=0.025  Sum_probs=100.2

Q ss_pred             CCeEEEEc--CCChhHHHHHHHHHHCCCeEEEEecCCCccc-----------cc------ccCCceeEEe----------
Q 023205           56 SEKLLVLG--GNGFVGSHICREALDRGLTVASLSRSGRSSL-----------RD------SWANNVIWHQ----------  106 (286)
Q Consensus        56 ~~~VlVtG--atG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~-----------~~------~~~~~~~~i~----------  106 (286)
                      .|..||||  ++..||..+++.|.++|.+|++..|......           ..      ..........          
T Consensus         2 ~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (329)
T d1uh5a_           2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAND   81 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSGGG
T ss_pred             CcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhhcc
Confidence            46789999  5579999999999999999999876542100           00      0011112222          


Q ss_pred             ----------ccCCCHhHHHHH-------hcCCCEEEEccccCCC------------cchhhhhhhHHHHHHHHHHHHcC
Q 023205          107 ----------GNLLSSDSWKEA-------LDGVTAVISCVGGFGS------------NSYMYKINGTANINAIRAASEKG  157 (286)
Q Consensus       107 ----------~Dl~d~~~~~~~-------~~~~d~vi~~a~~~~~------------~~~~~~~~~~~~~~l~~~a~~~~  157 (286)
                                .|+.+.+.++++       +.++|++||++|....            +...+++|+.+...+.+.+...-
T Consensus        82 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~~m  161 (329)
T d1uh5a_          82 IDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIM  161 (329)
T ss_dssp             CCHHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGE
T ss_pred             cchhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHhhc
Confidence                      244454444433       4578999999985421            12456788888888888876542


Q ss_pred             --CCEEEEEecCCcCCCCc-cccchHHHHHHHHHHHHH-------hCCCcEEEEeeCeee
Q 023205          158 --VKRFVYISAADFGVANY-LLQGYYEGKRAAETELLT-------RYPYGGVILRPGFIY  207 (286)
Q Consensus       158 --v~~~v~~Ss~~~~~~~~-~~~~y~~sK~~~E~~~~~-------~~g~~~~ilRp~~v~  207 (286)
                        -.++|.+||.......+ ....|+.+|...|.+.+.       .+|++++.|.||.+-
T Consensus       162 ~~~GsIv~iss~~~~~~~p~y~~~y~asKaal~~ltr~lA~Ela~~~gIRVNaI~PG~i~  221 (329)
T d1uh5a_         162 KPQSSIISLTYHASQKVVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLK  221 (329)
T ss_dssp             EEEEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCC
T ss_pred             ccccccccceeehhcccccccchhhhhhhccccccchhhHHHHhcccCcEEEEEecCccc
Confidence              24789888743222211 245689999999987753       259999999999874

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=99.17  E-value=9.4e-12  Score=96.82  Aligned_cols=78  Identities=22%  Similarity=0.142  Sum_probs=65.7

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc--c--ccCCceeEEeccCCCHhHHHHHhcCCCEEEEccc
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--D--SWANNVIWHQGNLLSSDSWKEALDGVTAVISCVG  130 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~--~--~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~  130 (286)
                      ..|+|+||||+|.||+.+++.|+++|++|+++.|+.++...  +  ....++.+..+|+.|.+.+++++.++|+||||||
T Consensus        22 ~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~iDilin~Ag  101 (191)
T d1luaa1          22 KGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKGAHFVFTAGA  101 (191)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTCSEEEECCC
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhccchhhhhhhcccHHHHHHHhcCcCeeeecCc
Confidence            46899999999999999999999999999999999755211  1  1123566788999999999999999999999998


Q ss_pred             cC
Q 023205          131 GF  132 (286)
Q Consensus       131 ~~  132 (286)
                      ..
T Consensus       102 ~g  103 (191)
T d1luaa1         102 IG  103 (191)
T ss_dssp             TT
T ss_pred             cc
Confidence            53

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=98.75  E-value=1.8e-08  Score=72.88  Aligned_cols=95  Identities=14%  Similarity=0.224  Sum_probs=70.7

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHH-hcCCCEEEEccccCCCc
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEA-LDGVTAVISCVGGFGSN  135 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~-~~~~d~vi~~a~~~~~~  135 (286)
                      |+|+|+|+ |.+|+.+++.|.+.|++|++++++++........-++.++.||.+|++.++++ ++.+|.++-+...   .
T Consensus         1 M~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~~~~~vi~Gd~~~~~~l~~~~i~~a~~vv~~t~~---d   76 (132)
T d1lssa_           1 MYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVTGK---E   76 (132)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECCSC---H
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhhhhhhhhhhhhhccCcccchhhhhhcChhhhhhhcccCCc---H
Confidence            68999998 99999999999999999999999876532211112678999999999999887 5789999876322   1


Q ss_pred             chhhhhhhHHHHHHHHHHHHcCCCEEEE
Q 023205          136 SYMYKINGTANINAIRAASEKGVKRFVY  163 (286)
Q Consensus       136 ~~~~~~~~~~~~~l~~~a~~~~v~~~v~  163 (286)
                          +.|.    .+...++..+++++|-
T Consensus        77 ----~~N~----~~~~~~k~~~~~~iI~   96 (132)
T d1lssa_          77 ----EVNL----MSSLLAKSYGINKTIA   96 (132)
T ss_dssp             ----HHHH----HHHHHHHHTTCCCEEE
T ss_pred             ----HHHH----HHHHHHHHcCCceEEE
Confidence                2232    2244566778776663

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.44  E-value=4.1e-07  Score=66.35  Aligned_cols=108  Identities=16%  Similarity=0.206  Sum_probs=76.0

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC--eEEEEecCCCccccccc--CCceeEEeccCCCHhHHHHHhcCCCEEEEccccCC
Q 023205           58 KLLVLGGNGFVGSHICREALDRGL--TVASLSRSGRSSLRDSW--ANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFG  133 (286)
Q Consensus        58 ~VlVtGatG~iG~~l~~~Ll~~g~--~V~~l~R~~~~~~~~~~--~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~~~  133 (286)
                      ||.|+||+|.+|++++..|..++.  ++.+++.++.+......  ......... .....+..+.++++|+|+.++|...
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a~Dl~~~~~~~~~~~-~~~~~~~~~~~~~aDivVitag~~~   80 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVKG-YLGPEQLPDCLKGCDVVVIPAGVPR   80 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTTSSSSCEEEE-EESGGGHHHHHTTCSEEEECCSCCC
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchhhHHHhhhhhhcCCCe-EEcCCChHHHhCCCCEEEECCCcCC
Confidence            799999999999999999988874  78888876533211111  111111111 1234566788899999999998643


Q ss_pred             C----cchhhhhhhHHHHHHHHHHHHcCCCEEEEEec
Q 023205          134 S----NSYMYKINGTANINAIRAASEKGVKRFVYISA  166 (286)
Q Consensus       134 ~----~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss  166 (286)
                      .    ..+.++.|......+++.+.+.+.+-++.+-|
T Consensus        81 ~~g~sR~~ll~~N~~i~~~i~~~i~~~~p~~iiivvt  117 (144)
T d1mlda1          81 KPGMTRDDLFNTNATIVATLTAACAQHCPDAMICIIS  117 (144)
T ss_dssp             CTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred             CCCCCcchHHHHHHHHHHHHHHHHHhcCCCeEEEEec
Confidence            2    24567889999999999999998777776666

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=98.37  E-value=1.4e-06  Score=62.74  Aligned_cols=72  Identities=17%  Similarity=0.174  Sum_probs=59.3

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHH-hcCCCEEEEccc
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEA-LDGVTAVISCVG  130 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~-~~~~d~vi~~a~  130 (286)
                      |+++|.|+ |.+|+++++.|.+.|++|++++.+++.. ..........+.+|.++++.++++ ++++|.||-+.+
T Consensus         1 k~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~~~~-~~~~~~~~~~~~gd~~~~~~l~~a~i~~a~~vi~~~~   73 (134)
T d2hmva1           1 KQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKV-NAYASYATHAVIANATEENELLSLGIRNFEYVIVAIG   73 (134)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHH-HHTTTTCSEEEECCTTCTTHHHHHTGGGCSEEEECCC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCeEEEecCcHHHH-HHHHHhCCcceeeecccchhhhccCCccccEEEEEcC
Confidence            46889987 9999999999999999999999987652 222345678889999999999887 788999887754

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=98.34  E-value=2.7e-06  Score=61.90  Aligned_cols=98  Identities=16%  Similarity=0.260  Sum_probs=58.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCC----CeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEcccc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRG----LTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG  131 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g----~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~  131 (286)
                      |++|.|.||||++|+.+++.|+++.    .+++++.++.......... .-.....++.+.+    .+.++|++|.+++.
T Consensus         1 MkkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s~g~~~~~~-~~~~~~~~~~~~~----~~~~~DivF~a~~~   75 (146)
T d1t4ba1           1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAAPSFG-GTTGTLQDAFDLE----ALKALDIIVTCQGG   75 (146)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCCGGG-TCCCBCEETTCHH----HHHTCSEEEECSCH
T ss_pred             CcEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeecccccccccccc-CCceeeecccchh----hhhcCcEEEEecCc
Confidence            5689999999999999999999874    2677777664432211110 1111112233332    35789999999744


Q ss_pred             CCCcchhhhhhhHHHHHHHHHHHHcCCCEEEEEecCCcC
Q 023205          132 FGSNSYMYKINGTANINAIRAASEKGVKRFVYISAADFG  170 (286)
Q Consensus       132 ~~~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~~~~  170 (286)
                                  .....+...+.+.|.+-+|.-.|+.+-
T Consensus        76 ------------~~s~~~~~~~~~~g~~~~VID~Ss~fR  102 (146)
T d1t4ba1          76 ------------DYTNEIYPKLRESGWQGYWIDAASSLR  102 (146)
T ss_dssp             ------------HHHHHHHHHHHHTTCCCEEEECSSTTT
T ss_pred             ------------hHHHHhhHHHHhcCCCeecccCCcccc
Confidence                        123345666667776544444444443

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=98.27  E-value=3.5e-06  Score=61.38  Aligned_cols=104  Identities=13%  Similarity=0.161  Sum_probs=73.5

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCC--CeEEEEecCCCcccc--------cccCCceeEEeccCCCHhHHHHHhcCCCE
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRG--LTVASLSRSGRSSLR--------DSWANNVIWHQGNLLSSDSWKEALDGVTA  124 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g--~~V~~l~R~~~~~~~--------~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~  124 (286)
                      ..+||.|.|+ |++|..++..|+.++  .+|.+++++++....        ........+..+|+       +.++++|+
T Consensus         4 ~~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d~-------~~~~~adi   75 (146)
T d1ez4a1           4 NHQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEY-------SDCKDADL   75 (146)
T ss_dssp             TBCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCG-------GGGTTCSE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeeccH-------HHhccccE
Confidence            3579999996 999999999999987  589999988643210        11123344555553       24689999


Q ss_pred             EEEccccCCCc----chhhhhhhHHHHHHHHHHHHcCCCEEEEEec
Q 023205          125 VISCVGGFGSN----SYMYKINGTANINAIRAASEKGVKRFVYISA  166 (286)
Q Consensus       125 vi~~a~~~~~~----~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss  166 (286)
                      |+.++|....+    ......|......+++...+.+.+-++.+-|
T Consensus        76 vvitag~~~~~g~~r~~l~~~N~~i~~~~~~~i~~~~p~aivivvt  121 (146)
T d1ez4a1          76 VVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAA  121 (146)
T ss_dssp             EEECCCC----------CHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             EEEecccccCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEeC
Confidence            99999865332    3556778888888899999988877777666

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=98.18  E-value=1.3e-05  Score=58.10  Aligned_cols=104  Identities=15%  Similarity=0.068  Sum_probs=70.9

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCC--CeEEEEecCCCccc-c-------c---ccCCceeEEeccCCCHhHHHHHhcCCC
Q 023205           57 EKLLVLGGNGFVGSHICREALDRG--LTVASLSRSGRSSL-R-------D---SWANNVIWHQGNLLSSDSWKEALDGVT  123 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g--~~V~~l~R~~~~~~-~-------~---~~~~~~~~i~~Dl~d~~~~~~~~~~~d  123 (286)
                      |||.|+||+|.+|..++..|+.++  .++.+++++++... +       .   ....+++....--.|.    +.++++|
T Consensus         1 MKV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~d~----~~l~~aD   76 (145)
T d1hyea1           1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDENL----RIIDESD   76 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTCG----GGGTTCS
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhcccccccCCccccCCcchH----HHhccce
Confidence            589999999999999999999988  48999998753210 0       0   1122333322111122    4678999


Q ss_pred             EEEEccccCCCc----chhhhhhhHHHHHHHHHHHHcCCCEEEEE
Q 023205          124 AVISCVGGFGSN----SYMYKINGTANINAIRAASEKGVKRFVYI  164 (286)
Q Consensus       124 ~vi~~a~~~~~~----~~~~~~~~~~~~~l~~~a~~~~v~~~v~~  164 (286)
                      +||.+||....+    .+.++.|..-...+++...+.+.+.++.+
T Consensus        77 vVVitAG~~~~~g~sR~dl~~~Na~iv~~i~~~i~~~~~~~iivV  121 (145)
T d1hyea1          77 VVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEICDTKIFVI  121 (145)
T ss_dssp             EEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEC
T ss_pred             EEEEecccccCCCCChhhhhhhhHHHHHHHHHHHhccCCCeEEEE
Confidence            999999865332    34567888888888888888876655433

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=98.18  E-value=2.5e-06  Score=64.30  Aligned_cols=74  Identities=19%  Similarity=0.193  Sum_probs=58.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCccccc-ccCCceeEEeccCCCHhHHHHHhcCCCEEEEccc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRD-SWANNVIWHQGNLLSSDSWKEALDGVTAVISCVG  130 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~-~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~  130 (286)
                      .|+|+|.|| |.+|+++++.|.++|++|++.+|+.++.... ...........+..+.......+...|.++.+..
T Consensus         2 ~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~~   76 (182)
T d1e5qa1           2 TKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISLIP   76 (182)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTCHHHHHHHHTTSSEEEECSC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhcccccccccccccchhhhHhhhhccceeEeecc
Confidence            478999997 9999999999999999999999997763321 1223455556677777788888888999887653

>d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Vibrio cholerae [TaxId: 666]

Probab=98.04  E-value=3.2e-05  Score=55.98  Aligned_cols=93  Identities=19%  Similarity=0.293  Sum_probs=54.7

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCC-C---eEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccccC
Q 023205           57 EKLLVLGGNGFVGSHICREALDRG-L---TVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGF  132 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g-~---~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~~  132 (286)
                      |||.|.||||++|..+++.|+++. +   ++..++.+............... ..+..+.    ..++++|+||.|++. 
T Consensus         1 mKVaIiGATGyvG~eLi~lLl~~~~~p~~~i~~~ss~~~~gk~~~~~~~~~~-~~~~~~~----~~~~~~DvvF~alp~-   74 (147)
T d1mb4a1           1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIGVPAPNFGKDAGM-LHDAFDI----ESLKQLDAVITCQGG-   74 (147)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSCCSSBCCCSSSCCCB-CEETTCH----HHHTTCSEEEECSCH-
T ss_pred             CEEEEECCccHHHHHHHHHHHhcCCCCceEEEEeccccccccccccCCccee-eecccch----hhhccccEEEEecCc-
Confidence            589999999999999999999764 2   56655544322111111111111 1122232    346789999999744 


Q ss_pred             CCcchhhhhhhHHHHHHHHHHHHcCCC-EEEEEec
Q 023205          133 GSNSYMYKINGTANINAIRAASEKGVK-RFVYISA  166 (286)
Q Consensus       133 ~~~~~~~~~~~~~~~~l~~~a~~~~v~-~~v~~Ss  166 (286)
                                 .-...+...+.+.|.+ .+|=.|+
T Consensus        75 -----------~~s~~~~~~l~~~g~~~~VIDlSs   98 (147)
T d1mb4a1          75 -----------SYTEKVYPALRQAGWKGYWIDAAS   98 (147)
T ss_dssp             -----------HHHHHHHHHHHHTTCCSEEEESSS
T ss_pred             -----------hHHHHHhHHHHHcCCceEEEeCCc
Confidence                       1123556666777875 4555565

>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Usg-1 protein homolog PA3116
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.04  E-value=5.7e-06  Score=60.13  Aligned_cols=93  Identities=16%  Similarity=0.202  Sum_probs=53.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC---eEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccccC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGL---TVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGF  132 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~---~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~~  132 (286)
                      +++|.|.||||++|..+++.|.+++|   ++..+..+......-. ...-++...++   +  ...+.++|++|.+++. 
T Consensus         2 ~mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~~~~Gk~i~-~~~~~~~~~~~---~--~~~~~~~d~vf~a~p~-   74 (144)
T d2hjsa1           2 PLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQRMG-FAESSLRVGDV---D--SFDFSSVGLAFFAAAA-   74 (144)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCEEE-ETTEEEECEEG---G--GCCGGGCSEEEECSCH-
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeecccCCccee-eccccchhccc---h--hhhhccceEEEecCCc-
Confidence            47899999999999999999986553   6766654432211100 00111111111   1  1235679999988643 


Q ss_pred             CCcchhhhhhhHHHHHHHHHHHHcCCCEEEEEecC
Q 023205          133 GSNSYMYKINGTANINAIRAASEKGVKRFVYISAA  167 (286)
Q Consensus       133 ~~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~  167 (286)
                                 .....+...+.+.|. ++|-.|+.
T Consensus        75 -----------~~s~~~~~~~~~~g~-~VID~Ss~   97 (144)
T d2hjsa1          75 -----------EVSRAHAERARAAGC-SVIDLSGA   97 (144)
T ss_dssp             -----------HHHHHHHHHHHHTTC-EEEETTCT
T ss_pred             -----------chhhhhccccccCCc-eEEeechh
Confidence                       112234555556665 67766663

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=98.04  E-value=3e-05  Score=56.42  Aligned_cols=104  Identities=13%  Similarity=0.267  Sum_probs=73.1

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCC--eEEEEecCCCcccc---------cccCCceeEEeccCCCHhHHHHHhcCCC
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGL--TVASLSRSGRSSLR---------DSWANNVIWHQGNLLSSDSWKEALDGVT  123 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~--~V~~l~R~~~~~~~---------~~~~~~~~~i~~Dl~d~~~~~~~~~~~d  123 (286)
                      ..+||.|+|+ |++|+.++..|+.++.  ++.+++++++....         ......+.+...|.       +.++++|
T Consensus         5 ~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~-------~~l~daD   76 (148)
T d1ldna1           5 GGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDY-------DDCRDAD   76 (148)
T ss_dssp             TSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCG-------GGTTTCS
T ss_pred             CCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECCH-------HHhccce
Confidence            3568999997 9999999999999874  89999987654211         01122344444443       4578999


Q ss_pred             EEEEccccCCCc----chhhhhhhHHHHHHHHHHHHcCCCEEEEEec
Q 023205          124 AVISCVGGFGSN----SYMYKINGTANINAIRAASEKGVKRFVYISA  166 (286)
Q Consensus       124 ~vi~~a~~~~~~----~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss  166 (286)
                      +|+.++|....+    .+....|......+++..++.+.+-++.+-|
T Consensus        77 vvvitag~~~~~~~~R~dl~~~N~~i~~~i~~~i~~~~p~a~~ivvt  123 (148)
T d1ldna1          77 LVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMASGFQGLFLVAT  123 (148)
T ss_dssp             EEEECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHHTCCSEEEECS
T ss_pred             eEEEecccccccCcchhHHHHHHHHHHHHHHHHHHhhCCCceEEEec
Confidence            999999875432    3556778888888888888887765555544

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=98.01  E-value=5.1e-05  Score=50.50  Aligned_cols=87  Identities=21%  Similarity=0.297  Sum_probs=63.6

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccccCCC
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFGS  134 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~~~~  134 (286)
                      ..++|+|.|. |-.|..+++.|.++|++|++.+.+............+.+..+.. +.    ..+.++|.||..-|...+
T Consensus         4 ~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~~~~~~~~~~~~~~~~~~~-~~----~~~~~~d~vi~SPGi~~~   77 (93)
T d2jfga1           4 QGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMTPPGLDKLPEAVERHTGSL-ND----EWLMAADLIVASPGIALA   77 (93)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSSCTTGGGSCTTSCEEESBC-CH----HHHHHCSEEEECTTSCTT
T ss_pred             CCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcCchhHHHHhhccceeeccc-ch----hhhccCCEEEECCCCCCC
Confidence            3678999997 88999999999999999999998776544444445666666654 22    235678999988765322


Q ss_pred             cchhhhhhhHHHHHHHHHHHHcCCC
Q 023205          135 NSYMYKINGTANINAIRAASEKGVK  159 (286)
Q Consensus       135 ~~~~~~~~~~~~~~l~~~a~~~~v~  159 (286)
                      .            .+++.|++.+++
T Consensus        78 ~------------~~~~~a~~~gi~   90 (93)
T d2jfga1          78 H------------PSLSAAADAGIE   90 (93)
T ss_dssp             S------------HHHHHHHHTTCE
T ss_pred             C------------HHHHHHHHcCCC
Confidence            2            357788888763

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=98.01  E-value=1.6e-05  Score=57.70  Aligned_cols=105  Identities=17%  Similarity=0.135  Sum_probs=69.5

Q ss_pred             CeEEEEcCCChhHHHHHHHHHH-CC--CeEEEEecCCCccc-----cccc-CCceeEEeccCCCHhHHHHHhcCCCEEEE
Q 023205           57 EKLLVLGGNGFVGSHICREALD-RG--LTVASLSRSGRSSL-----RDSW-ANNVIWHQGNLLSSDSWKEALDGVTAVIS  127 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~-~g--~~V~~l~R~~~~~~-----~~~~-~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~  127 (286)
                      |||.|+|++|.+|++++-.|.. .+  .++.+++..+....     .... ......+.    ...++ +.++++|+||.
T Consensus         1 MKV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~~~~g~a~Dl~h~~~~~~~~~~~----~~~~~-~~~~~aDvvvi   75 (145)
T d2cmda1           1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFS----GEDAT-PALEGADVVLI   75 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSSTTHHHHHHHHHTSCSSCEEEEEC----SSCCH-HHHTTCSEEEE
T ss_pred             CEEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccccchhHHHHHHCCccccCCcEEE----cCCCc-cccCCCCEEEE
Confidence            5899999999999999988754 34  58888887542210     0100 11222221    11223 36889999999


Q ss_pred             ccccCCC----cchhhhhhhHHHHHHHHHHHHcCCCEEEEEec
Q 023205          128 CVGGFGS----NSYMYKINGTANINAIRAASEKGVKRFVYISA  166 (286)
Q Consensus       128 ~a~~~~~----~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss  166 (286)
                      ++|....    ..+..+.|......+++...+.+.+.++.+=|
T Consensus        76 taG~~~k~g~~R~dl~~~N~~i~~~v~~~i~~~~p~aivivvt  118 (145)
T d2cmda1          76 SAGVRRKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIIT  118 (145)
T ss_dssp             CCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred             CCCccCCCCcchhhHHHHHHHHHHHHHHHHHhhCCCcEEEEcc
Confidence            9996532    23567888888889999999887766555544

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=97.92  E-value=8.7e-05  Score=53.49  Aligned_cols=102  Identities=11%  Similarity=0.154  Sum_probs=67.9

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCC--eEEEEecCCCccccc--------ccCCceeEEeccCCCHhHHHHHhcCCCEEE
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGL--TVASLSRSGRSSLRD--------SWANNVIWHQGNLLSSDSWKEALDGVTAVI  126 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~--~V~~l~R~~~~~~~~--------~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi  126 (286)
                      +||.|+|+ |.+|+.++-.|+.++.  ++.+++++++....+        ..........+|       .+.++++|+|+
T Consensus         2 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~-------~~~~~~adivv   73 (142)
T d1y6ja1           2 SKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGD-------YSDVKDCDVIV   73 (142)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--C-------GGGGTTCSEEE
T ss_pred             CeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeCc-------HHHhCCCceEE
Confidence            58999997 9999999999999874  899999887653111        011233333222       23578999999


Q ss_pred             EccccCCCc----chhhhhhhHHHHHHHHHHHHcCCCEEEEEec
Q 023205          127 SCVGGFGSN----SYMYKINGTANINAIRAASEKGVKRFVYISA  166 (286)
Q Consensus       127 ~~a~~~~~~----~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss  166 (286)
                      .+||....+    ......|..-...+++...+.+.+-++.+-|
T Consensus        74 itag~~~~~~~~r~~l~~~N~~i~~~i~~~i~~~~p~ai~ivvt  117 (142)
T d1y6ja1          74 VTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVVS  117 (142)
T ss_dssp             ECCCC------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEECS
T ss_pred             EecccccCcCcchhHHhhHHHHHHHHHHHHhhccCCCceEEEec
Confidence            999865322    3456778888888899888887766665555

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=97.91  E-value=0.0001  Score=53.94  Aligned_cols=106  Identities=18%  Similarity=0.177  Sum_probs=73.0

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCCCcccccc---------cCCceeEEeccCCCHhHHHHHhcCCCE
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSLRDS---------WANNVIWHQGNLLSSDSWKEALDGVTA  124 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~~~~---------~~~~~~~i~~Dl~d~~~~~~~~~~~d~  124 (286)
                      +++||.|.|+ |.+|+.++..|..++. ++.+++.+++......         .........     ....+++++++|+
T Consensus         6 k~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~-----~~~~~~~~~~adi   79 (154)
T d1pzga1           6 RRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRA-----EYSYEAALTGADC   79 (154)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEE-----ECSHHHHHTTCSE
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccccCCeeEEec-----cCchhhhhcCCCe
Confidence            3578999997 9999999988887774 8888887765421110         011111111     1224567889999


Q ss_pred             EEEccccCCC---------cchhhhhhhHHHHHHHHHHHHcCCCEEEEEec
Q 023205          125 VISCVGGFGS---------NSYMYKINGTANINAIRAASEKGVKRFVYISA  166 (286)
Q Consensus       125 vi~~a~~~~~---------~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss  166 (286)
                      |+.++|....         ....+..|......+++.+.+.+.+-++.+-|
T Consensus        80 Vvitag~~~~~g~~~~~~tR~~l~~~n~~iv~~i~~~i~~~~p~aiviivs  130 (154)
T d1pzga1          80 VIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFIIVVT  130 (154)
T ss_dssp             EEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             EEEecccccCCCCCCcccchhhhhhhhHHHHHHHHHHHHhcCCCcEEEEeC
Confidence            9999986421         13456778888888999999888877777666

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=97.90  E-value=5.5e-05  Score=52.02  Aligned_cols=68  Identities=18%  Similarity=0.328  Sum_probs=55.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhc--CCCEEEE
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD--GVTAVIS  127 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~--~~d~vi~  127 (286)
                      ..||.|.|| |++|+-++....+.|++|++++.+++......   .-+++.+|+.|.+.+.++..  ++|+|-.
T Consensus        11 ~~kigIlGg-GQL~rMla~aA~~lG~~v~v~d~~~~~PA~~v---a~~~i~~~~~d~~~l~~~~~~~~~DviT~   80 (111)
T d1kjqa2          11 ATRVMLLGS-GELGKEVAIECQRLGVEVIAVDRYADAPAMHV---AHRSHVINMLDGDALRRVVELEKPHYIVP   80 (111)
T ss_dssp             CCEEEEESC-SHHHHHHHHHHHTTTCEEEEEESSTTCGGGGG---SSEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             CCEEEEEeC-CHHHHHHHHHHHHCCCEEEEEcCCCCCchhhc---CCeEEECCCCCHHHHHHHHHhhCCceEEE
Confidence            458999995 99999999999999999999999876533221   23678899999999988774  5798853

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=97.89  E-value=6.9e-05  Score=53.93  Aligned_cols=102  Identities=16%  Similarity=0.121  Sum_probs=71.0

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC--eEEEEecCCCccc-c---------cccCCceeEEeccCCCHhHHHHHhcCCCEE
Q 023205           58 KLLVLGGNGFVGSHICREALDRGL--TVASLSRSGRSSL-R---------DSWANNVIWHQGNLLSSDSWKEALDGVTAV  125 (286)
Q Consensus        58 ~VlVtGatG~iG~~l~~~Ll~~g~--~V~~l~R~~~~~~-~---------~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~v  125 (286)
                      ||.|+||+|.+|+.++-.|+.++.  ++.+++.+..... .         .......++..+|.   +    .++++|+|
T Consensus         2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~~---~----~~~~aDiV   74 (142)
T d1o6za1           2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGY---E----DTAGSDVV   74 (142)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCG---G----GGTTCSEE
T ss_pred             eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCceEeeCCH---H----HhhhcCEE
Confidence            799999999999999999999984  7888875432210 0         01123444444443   2    35799999


Q ss_pred             EEccccCCCc----chhhhhhhHHHHHHHHHHHHcCCCEEEEEec
Q 023205          126 ISCVGGFGSN----SYMYKINGTANINAIRAASEKGVKRFVYISA  166 (286)
Q Consensus       126 i~~a~~~~~~----~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss  166 (286)
                      +.+||....+    .+.++.|..-...+++..++.+.+-++.+=|
T Consensus        75 vitaG~~~~~g~~R~dl~~~N~~I~~~i~~~i~~~~p~~i~ivvt  119 (142)
T d1o6za1          75 VITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTS  119 (142)
T ss_dssp             EECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECC
T ss_pred             EEecccccccCCchhhHHHHHHHHHHHHHHHHHhcCCCceEEEec
Confidence            9999865432    3556788888888899998888766555544

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=97.85  E-value=2.6e-05  Score=57.13  Aligned_cols=72  Identities=19%  Similarity=0.263  Sum_probs=59.5

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcc---cccccCCceeEEeccCCCHhHHHHH-hcCCCEEEEcc
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSS---LRDSWANNVIWHQGNLLSSDSWKEA-LDGVTAVISCV  129 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~---~~~~~~~~~~~i~~Dl~d~~~~~~~-~~~~d~vi~~a  129 (286)
                      .+|+|.|. |-+|..+++.|.++|++|+++..+++..   .......++.++.||.+|++.++++ ++.+|.||-+.
T Consensus         4 nHiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~~~vi~Gd~~d~~~L~~a~i~~a~~vi~~~   79 (153)
T d1id1a_           4 DHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALS   79 (153)
T ss_dssp             SCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEECS
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhhcCCcEEEEccCcchHHHHHhccccCCEEEEcc
Confidence            46999997 9999999999999999999999887542   2233356899999999999998765 56799999875

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=97.85  E-value=7.5e-05  Score=53.88  Aligned_cols=103  Identities=12%  Similarity=0.037  Sum_probs=71.6

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCC--CeEEEEecCCCccccc---------ccCCceeEEeccCCCHhHHHHHhcCCCEE
Q 023205           57 EKLLVLGGNGFVGSHICREALDRG--LTVASLSRSGRSSLRD---------SWANNVIWHQGNLLSSDSWKEALDGVTAV  125 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g--~~V~~l~R~~~~~~~~---------~~~~~~~~i~~Dl~d~~~~~~~~~~~d~v  125 (286)
                      |||.|+|| |.+|+.++..|+.++  .++.++++++......         ......++...+  |.    +.++++|+|
T Consensus         1 mKI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~~--~~----~~~~dadvv   73 (142)
T d1guza1           1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGSN--DY----ADTANSDIV   73 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEES--CG----GGGTTCSEE
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEecC--CH----HHhcCCeEE
Confidence            58999996 999999999999987  4899999887652111         011233343222  22    357899999


Q ss_pred             EEccccCCCc----chhhhhhhHHHHHHHHHHHHcCCCEEEEEec
Q 023205          126 ISCVGGFGSN----SYMYKINGTANINAIRAASEKGVKRFVYISA  166 (286)
Q Consensus       126 i~~a~~~~~~----~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss  166 (286)
                      +.++|....+    ....+.|..-...+++..++.+.+-++.+-|
T Consensus        74 vitag~~~~~g~~r~~l~~~N~~i~~~i~~~i~~~~p~aivivvt  118 (142)
T d1guza1          74 IITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIVVS  118 (142)
T ss_dssp             EECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCSSCEEEECC
T ss_pred             EEEEecCCCCCCchHHHHHHHHHHHHHHHHHhhccCCCeEEEEec
Confidence            9999864322    3455677777788888888887766666655

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.84  E-value=5.4e-05  Score=54.50  Aligned_cols=102  Identities=18%  Similarity=0.176  Sum_probs=71.9

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCC--CeEEEEecCCCcccc--------cccCCceeEEeccCCCHhHHHHHhcCCCEEE
Q 023205           57 EKLLVLGGNGFVGSHICREALDRG--LTVASLSRSGRSSLR--------DSWANNVIWHQGNLLSSDSWKEALDGVTAVI  126 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g--~~V~~l~R~~~~~~~--------~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi  126 (286)
                      |||.|.|+ |.+|+.++..|+.++  .++.+++++++....        ........+..+|.       +.++++|+|+
T Consensus         1 mKI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~~~-------~~~~~adivv   72 (140)
T d1a5za1           1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGDY-------ADLKGSDVVI   72 (140)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECCG-------GGGTTCSEEE
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccCCcH-------HHhcCCCEEE
Confidence            58999996 999999999998887  489988887644211        01122344443332       3478999999


Q ss_pred             EccccCCCc----chhhhhhhHHHHHHHHHHHHcCCCEEEEEec
Q 023205          127 SCVGGFGSN----SYMYKINGTANINAIRAASEKGVKRFVYISA  166 (286)
Q Consensus       127 ~~a~~~~~~----~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss  166 (286)
                      .++|....+    .+.+..|..-...+++...+.+.+-++++-|
T Consensus        73 itag~~~~~g~~r~dl~~~N~~I~~~i~~~i~~~~p~aivivvt  116 (140)
T d1a5za1          73 VAAGVPQKPGETRLQLLGRNARVMKEIARNVSKYAPDSIVIVVT  116 (140)
T ss_dssp             ECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             EecccccCCCcchhhhhccccchHHHHHHHHHhcCCCcEEEEeC
Confidence            999875432    2455677777888888888888777777655

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.82  E-value=5.6e-06  Score=63.11  Aligned_cols=36  Identities=22%  Similarity=0.345  Sum_probs=33.5

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCc
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRS   92 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~   92 (286)
                      |||.|+||+|.+|+.+++.|+++|++|++.+|++++
T Consensus         1 Mki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~   36 (212)
T d1jaya_           1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEK   36 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHH
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHH
Confidence            689999999999999999999999999999998755

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=97.76  E-value=0.00012  Score=53.03  Aligned_cols=102  Identities=15%  Similarity=0.153  Sum_probs=70.9

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCC--CeEEEEecCCCcccc---------cccCCceeEEeccCCCHhHHHHHhcCCCEE
Q 023205           57 EKLLVLGGNGFVGSHICREALDRG--LTVASLSRSGRSSLR---------DSWANNVIWHQGNLLSSDSWKEALDGVTAV  125 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g--~~V~~l~R~~~~~~~---------~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~v  125 (286)
                      +||.|+|+ |++|+.++-.|+.+|  .++.++++++++...         ............|.       +.++++|+|
T Consensus         2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~~d~-------~~l~~adiV   73 (146)
T d1hyha1           2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVINDW-------AALADADVV   73 (146)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESCG-------GGGTTCSEE
T ss_pred             CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceeccCH-------HHhccccEE
Confidence            68999995 999999999999887  488888887654211         01122334444442       346899999


Q ss_pred             EEccccCC--------CcchhhhhhhHHHHHHHHHHHHcCCCEEEEEec
Q 023205          126 ISCVGGFG--------SNSYMYKINGTANINAIRAASEKGVKRFVYISA  166 (286)
Q Consensus       126 i~~a~~~~--------~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss  166 (286)
                      |.+||...        ......+.|......+++..++.+.+-++.+-|
T Consensus        74 VitaG~~~~~~~~~g~~R~~l~~~N~~i~~~i~~~i~~~~p~aivivvt  122 (146)
T d1hyha1          74 ISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGFHGVLVVIS  122 (146)
T ss_dssp             EECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             EEeccccccccccCCccHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEec
Confidence            99998542        112345678888888888888888777776666

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=97.75  E-value=0.00013  Score=52.59  Aligned_cols=103  Identities=16%  Similarity=0.130  Sum_probs=72.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCC--eEEEEecCCCcccc--------cccCCceeEEeccCCCHhHHHHHhcCCCEEE
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGL--TVASLSRSGRSSLR--------DSWANNVIWHQGNLLSSDSWKEALDGVTAVI  126 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~--~V~~l~R~~~~~~~--------~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi  126 (286)
                      .||.|+|+ |.+|++++..|+.++.  ++.+++++++....        ........+...+  +.    +.++++|+|+
T Consensus         2 ~Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~~--~~----~~~~daDvVV   74 (143)
T d1llda1           2 TKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSD--DP----EICRDADMVV   74 (143)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEES--CG----GGGTTCSEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCCCceeecCC--CH----HHhhCCcEEE
Confidence            47999997 9999999999999984  89999887644211        0112233333332  22    3477899999


Q ss_pred             EccccCCCc----chhhhhhhHHHHHHHHHHHHcCCCEEEEEec
Q 023205          127 SCVGGFGSN----SYMYKINGTANINAIRAASEKGVKRFVYISA  166 (286)
Q Consensus       127 ~~a~~~~~~----~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss  166 (286)
                      .++|....+    .+.+..|..-...++...++.+.+-++.+-|
T Consensus        75 itaG~~~~~g~~R~dl~~~N~~i~~~i~~~i~~~~p~ai~ivvt  118 (143)
T d1llda1          75 ITAGPRQKPGQSRLELVGATVNILKAIMPNLVKVAPNAIYMLIT  118 (143)
T ss_dssp             ECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECC
T ss_pred             EecccccCCCCchhhhhhhhHHHHHHHHHHHHhhCCCeEEEEeC
Confidence            999976432    3556778888888888888888766665555

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=97.70  E-value=0.00014  Score=52.31  Aligned_cols=103  Identities=15%  Similarity=0.159  Sum_probs=69.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCC-CeEEEEecCCCcccccc---------cCCceeEEe-ccCCCHhHHHHHhcCCCE
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRG-LTVASLSRSGRSSLRDS---------WANNVIWHQ-GNLLSSDSWKEALDGVTA  124 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g-~~V~~l~R~~~~~~~~~---------~~~~~~~i~-~Dl~d~~~~~~~~~~~d~  124 (286)
                      ++||.|+|+ |.+|..++-.|..++ .++.+++.+++....+.         .....++.. .|+       +.++++|+
T Consensus         1 r~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~d~-------~~~~~adv   72 (142)
T d1uxja1           1 RKKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNY-------ADTANSDV   72 (142)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCG-------GGGTTCSE
T ss_pred             CCeEEEECC-CHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhccccccCCCCEEEecCcH-------HHhcCCCE
Confidence            368999996 999999999988877 48888888765421100         112233332 222       24678999


Q ss_pred             EEEccccCCC----cchhhhhhhHHHHHHHHHHHHcCCCEEEEEec
Q 023205          125 VISCVGGFGS----NSYMYKINGTANINAIRAASEKGVKRFVYISA  166 (286)
Q Consensus       125 vi~~a~~~~~----~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss  166 (286)
                      ||.+||....    ..+.++.|......+++...+.+.+-++.+-|
T Consensus        73 vvitag~~~~~~~~r~dl~~~N~~i~~~i~~~i~k~~p~aivivvt  118 (142)
T d1uxja1          73 IVVTSGAPRKPGMSREDLIKVNADITRACISQAAPLSPNAVIIMVN  118 (142)
T ss_dssp             EEECCSCC---------CHHHHHHHHHHHHHHHGGGCTTCEEEECS
T ss_pred             EEEeeeccCCcCcchhHHHhHHHHHHHHHHHHHhccCCCceEEEeC
Confidence            9999986532    23556778888888899998888776776655

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=97.69  E-value=0.0002  Score=51.93  Aligned_cols=104  Identities=14%  Similarity=0.193  Sum_probs=71.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCC-CeEEEEecCCCcccccc---------cCCceeEEeccCCCHhHHHHHhcCCCEE
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRG-LTVASLSRSGRSSLRDS---------WANNVIWHQGNLLSSDSWKEALDGVTAV  125 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g-~~V~~l~R~~~~~~~~~---------~~~~~~~i~~Dl~d~~~~~~~~~~~d~v  125 (286)
                      +.||.|.|+ |.+|+.++..|..++ .++.+++++++....+.         ...+..+...+  +.    +.++++|+|
T Consensus         3 ~~KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~--~~----~~~~~advv   75 (150)
T d1t2da1           3 KAKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSN--TY----DDLAGADVV   75 (150)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEEC--CG----GGGTTCSEE
T ss_pred             CCeEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccCCCcEEEecc--cc----cccCCCcEE
Confidence            468999996 999999998777776 48888888775421110         11233333322  22    456789999


Q ss_pred             EEccccCCC---------cchhhhhhhHHHHHHHHHHHHcCCCEEEEEec
Q 023205          126 ISCVGGFGS---------NSYMYKINGTANINAIRAASEKGVKRFVYISA  166 (286)
Q Consensus       126 i~~a~~~~~---------~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss  166 (286)
                      +.+++....         ....++.|......+++..++.+.+-++.+-|
T Consensus        76 vitag~~~~~g~~~~~~~R~~l~~~N~~iv~~i~~~i~~~~p~aivivvt  125 (150)
T d1t2da1          76 IVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIVVT  125 (150)
T ss_dssp             EECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred             EEecccccCCCCCccccchhHHHHHHHHHHHHHHHHHHhcCCCeEEEEec
Confidence            999986432         22446778888888999999988777776655

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=97.68  E-value=0.00057  Score=49.95  Aligned_cols=103  Identities=14%  Similarity=0.073  Sum_probs=71.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC--eEEEEecCCCccccc---------ccCCceeEEeccCCCHhHHHHHhcCCCE
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGL--TVASLSRSGRSSLRD---------SWANNVIWHQGNLLSSDSWKEALDGVTA  124 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~--~V~~l~R~~~~~~~~---------~~~~~~~~i~~Dl~d~~~~~~~~~~~d~  124 (286)
                      .+||.|+|+ |.+|..++-.|..+|.  ++.+++++++....+         ..........+|   .    +.++++|+
T Consensus        20 ~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~~~d---~----~~~~~adi   91 (160)
T d1i0za1          20 NNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVADKD---Y----SVTANSKI   91 (160)
T ss_dssp             SSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEECSS---G----GGGTTCSE
T ss_pred             CCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeEEeccc---h----hhcccccE
Confidence            569999996 9999999999999985  899888875442110         011122222233   2    34788999


Q ss_pred             EEEccccCCCc----chhhhhhhHHHHHHHHHHHHcCCCEEEEEec
Q 023205          125 VISCVGGFGSN----SYMYKINGTANINAIRAASEKGVKRFVYISA  166 (286)
Q Consensus       125 vi~~a~~~~~~----~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss  166 (286)
                      |+..||....+    ....+.|......++...++.+.+-++.+-|
T Consensus        92 VVitAg~~~~~g~tR~~l~~~N~~i~~~i~~~i~~~~p~aiiivvt  137 (160)
T d1i0za1          92 VVVTAGVRQQEGESRLNLVQRNVNVFKFIIPQIVKYSPDCIIIVVS  137 (160)
T ss_dssp             EEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             EEEecCCccccCcchHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeC
Confidence            99999976432    3456778888888888888888766655555

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=97.65  E-value=9.3e-06  Score=60.30  Aligned_cols=68  Identities=16%  Similarity=0.105  Sum_probs=47.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccc--cCC---ceeEEeccCCCHhHHHHHhcCCCEEEEcccc
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDS--WAN---NVIWHQGNLLSSDSWKEALDGVTAVISCVGG  131 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~--~~~---~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~  131 (286)
                      |||+|.|+ |.+|..++..|.+.|++|.+++|++.......  ...   ....+..+  +.    +.+.++|+||.+.-.
T Consensus         1 MkI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~--~~----~~~~~~D~iii~vka   73 (167)
T d1ks9a2           1 MKITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQPYCSVNLVETDGSIFNESLTAN--DP----DFLATSDLLLVTLKA   73 (167)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSEEEEEEECTTSCEEEEEEEES--CH----HHHHTCSEEEECSCG
T ss_pred             CEEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHHHhhhhccccCCccccccccccc--hh----hhhcccceEEEeecc
Confidence            68999998 99999999999999999999999876532211  001   11111111  22    345679999998644

>d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.63  E-value=3.2e-05  Score=58.27  Aligned_cols=93  Identities=11%  Similarity=0.141  Sum_probs=53.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCC-CeEEEEec-CCCccccc-------cc--CCceeEEeccCCCHhHHHHHhcCCCE
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRG-LTVASLSR-SGRSSLRD-------SW--ANNVIWHQGNLLSSDSWKEALDGVTA  124 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g-~~V~~l~R-~~~~~~~~-------~~--~~~~~~i~~Dl~d~~~~~~~~~~~d~  124 (286)
                      |++|.|.||||++|..+++.|.++. .++..+.- ..+....+       ..  .....+...     ++......++|+
T Consensus         1 MikVaIiGATGyvG~eLlrlL~~HP~~ei~~l~~~s~~~~aGk~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~dv   75 (179)
T d2g17a1           1 MLNTLIVGASGYAGAELVSYVNRHPHMTITALTVSAQSNDAGKLISDLHPQLKGIVDLPLQPM-----SDVRDFSADVDV   75 (179)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTCBHHHHCGGGTTTCCCBEEEE-----SCGGGTCTTCCE
T ss_pred             CcEEEEECcccHHHHHHHHHHHhCCCCceEeeEeecccccccccccccccccccccccccccc-----hhhhhhhcccce
Confidence            6799999999999999999999985 57765543 22111100       00  011111111     112234567999


Q ss_pred             EEEccccCCCcchhhhhhhHHHHHHHHHHHHcCCCEEEEEec
Q 023205          125 VISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISA  166 (286)
Q Consensus       125 vi~~a~~~~~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss  166 (286)
                      +|.+.+..            ....++....+.++ ++|-.|+
T Consensus        76 vf~alp~~------------~s~~~~~~~~~~~~-~vIDlSa  104 (179)
T d2g17a1          76 VFLATAHE------------VSHDLAPQFLQAGC-VVFDLSG  104 (179)
T ss_dssp             EEECSCHH------------HHHHHHHHHHHTTC-EEEECSS
T ss_pred             eeccccch------------hHHHHhhhhhhcCc-eeecccc
Confidence            99996441            11233445555665 6777776

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=97.61  E-value=9.3e-05  Score=53.95  Aligned_cols=56  Identities=23%  Similarity=0.354  Sum_probs=45.3

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccc
Q 023205           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVG  130 (286)
Q Consensus        54 ~~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~  130 (286)
                      ..+++|.|.|+.|.+|..+++.|.++||+|.+.+|+....                     .+...+++|.++.+..
T Consensus         7 ~~~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~---------------------~~~~~~~~~~v~~~~~   62 (152)
T d2pv7a2           7 SDIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAV---------------------AESILANADVVIVSVP   62 (152)
T ss_dssp             TTCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGG---------------------HHHHHTTCSEEEECSC
T ss_pred             CCCCeEEEEcCCCHHHHHHHHHHHHcCCCcEecccccccc---------------------cchhhhhccccccccc
Confidence            3477999999999999999999999999999999875431                     2345667888887754

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.57  E-value=7.1e-05  Score=55.81  Aligned_cols=73  Identities=21%  Similarity=0.194  Sum_probs=50.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVG  130 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~  130 (286)
                      ..+|+|+||+|.+|...++.+...|.+|++.++++++... ...-+.+.+ .|..+........+++|+||.+.|
T Consensus        28 g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~-~~~lGa~~~-i~~~~~~~~~~~~~g~D~v~d~~G  100 (171)
T d1iz0a2          28 GEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLAL-PLALGAEEA-ATYAEVPERAKAWGGLDLVLEVRG  100 (171)
T ss_dssp             TCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHH-HHHTTCSEE-EEGGGHHHHHHHTTSEEEEEECSC
T ss_pred             CCEEEEEeccccchhhhhhhhccccccccccccccccccc-cccccccee-eehhhhhhhhhccccccccccccc
Confidence            5689999999999999999999999999999987654221 111122222 144333322334568999999876

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.56  E-value=0.00037  Score=49.99  Aligned_cols=103  Identities=15%  Similarity=0.077  Sum_probs=70.9

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCC--CeEEEEecCCCccccc---------ccCCceeEEeccCCCHhHHHHHhcCCCEE
Q 023205           57 EKLLVLGGNGFVGSHICREALDRG--LTVASLSRSGRSSLRD---------SWANNVIWHQGNLLSSDSWKEALDGVTAV  125 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g--~~V~~l~R~~~~~~~~---------~~~~~~~~i~~Dl~d~~~~~~~~~~~d~v  125 (286)
                      |||.|+|+ |.+|..++-.|+.++  .++.+++++++....+         ......++...+  |.    +.++++|+|
T Consensus         1 MKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~~--d~----~~~~~adiV   73 (142)
T d1ojua1           1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGA--DY----SLLKGSEII   73 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEES--CG----GGGTTCSEE
T ss_pred             CEEEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCccccCC--CH----HHhccccEE
Confidence            68999996 999999999999887  4799998876542110         011222333221  22    367899999


Q ss_pred             EEccccCCCc----chhhhhhhHHHHHHHHHHHHcCCCEEEEEec
Q 023205          126 ISCVGGFGSN----SYMYKINGTANINAIRAASEKGVKRFVYISA  166 (286)
Q Consensus       126 i~~a~~~~~~----~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss  166 (286)
                      +..+|....+    .+....|..-...+.+..++.+.+-++.+-|
T Consensus        74 vitag~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~p~aivivvt  118 (142)
T d1ojua1          74 VVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVT  118 (142)
T ss_dssp             EECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECS
T ss_pred             EEeccccCCCCCchHHHHHHhhHHHHHHHHHHHhhCCCcEEEEec
Confidence            9999865332    3455677777778888888888777777666

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=97.56  E-value=0.00043  Score=51.51  Aligned_cols=98  Identities=13%  Similarity=0.035  Sum_probs=63.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCC-----C--eEEEEecCCCccc-c-------cccCCceeEEeccCCCHhHHHHHhc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRG-----L--TVASLSRSGRSSL-R-------DSWANNVIWHQGNLLSSDSWKEALD  120 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g-----~--~V~~l~R~~~~~~-~-------~~~~~~~~~i~~Dl~d~~~~~~~~~  120 (286)
                      ..+|.||||+|.||++++-.|++..     .  .+..++....... .       ....+...-+..    ..+..+.++
T Consensus        24 ~~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a~~~~~~~~~----~~~~~~~~~   99 (175)
T d7mdha1          24 LVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSI----GIDPYEVFE   99 (175)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEE----ESCHHHHTT
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhcccccccccCccc----cccchhhcc
Confidence            3479999999999999999998753     1  3444454432211 0       001112221111    123557889


Q ss_pred             CCCEEEEccccCCCc----chhhhhhhHHHHHHHHHHHHcC
Q 023205          121 GVTAVISCVGGFGSN----SYMYKINGTANINAIRAASEKG  157 (286)
Q Consensus       121 ~~d~vi~~a~~~~~~----~~~~~~~~~~~~~l~~~a~~~~  157 (286)
                      ++|+||..+|....+    .+.++.|......+.++..+..
T Consensus       100 ~aDvVvi~ag~~rkpg~tR~Dll~~N~~I~k~~~~~i~~~a  140 (175)
T d7mdha1         100 DVDWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAVA  140 (175)
T ss_dssp             TCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred             CCceEEEeeccCCCCCCcHHHHHHHHHHHHHHHHHHHHhhC
Confidence            999999999876433    3566788888888899888854

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.55  E-value=5.2e-05  Score=58.20  Aligned_cols=74  Identities=19%  Similarity=0.205  Sum_probs=48.2

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEecc-------------CCCHhHHHHHhcCCC
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGN-------------LLSSDSWKEALDGVT  123 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~D-------------l~d~~~~~~~~~~~d  123 (286)
                      |+|.|.| .|++|..++..|++.|++|++++.+++.... .......+.+.+             +.-..++.++++++|
T Consensus         1 MkI~ViG-lG~vGl~~a~~la~~g~~V~g~D~n~~~i~~-ln~g~~p~~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~d   78 (202)
T d1mv8a2           1 MRISIFG-LGYVGAVCAGCLSARGHEVIGVDVSSTKIDL-INQGKSPIVEPGLEALLQQGRQTGRLSGTTDFKKAVLDSD   78 (202)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHH-HHTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHHTCS
T ss_pred             CEEEEEC-CCHhHHHHHHHHHhCCCcEEEEeCCHHHHHH-hcccCCcccchhhhhhhhhhhcccccccCCCHHHHHhhCC
Confidence            6899997 5999999999999999999999987543110 000001011111             111133566778899


Q ss_pred             EEEEccccC
Q 023205          124 AVISCVGGF  132 (286)
Q Consensus       124 ~vi~~a~~~  132 (286)
                      ++|.|.+..
T Consensus        79 ~i~i~VpTP   87 (202)
T d1mv8a2          79 VSFICVGTP   87 (202)
T ss_dssp             EEEECCCCC
T ss_pred             EEEEecCcc
Confidence            999998753

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.54  E-value=0.00035  Score=51.13  Aligned_cols=103  Identities=15%  Similarity=0.068  Sum_probs=69.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC--eEEEEecCCCcccc------c---ccCCceeEEeccCCCHhHHHHHhcCCCE
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGL--TVASLSRSGRSSLR------D---SWANNVIWHQGNLLSSDSWKEALDGVTA  124 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~--~V~~l~R~~~~~~~------~---~~~~~~~~i~~Dl~d~~~~~~~~~~~d~  124 (286)
                      +.||.|+|+ |.+|..++..|..++.  ++.+++++++....      .   ...........|+       +.++++|+
T Consensus        19 ~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~d~-------~~~~~adi   90 (159)
T d2ldxa1          19 RCKITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFGKDY-------NVSANSKL   90 (159)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEESSG-------GGGTTEEE
T ss_pred             CCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEeccch-------hhhccccE
Confidence            458999996 9999999999999874  89999887543211      0   1111222223332       34578999


Q ss_pred             EEEccccCCC----cchhhhhhhHHHHHHHHHHHHcCCCEEEEEec
Q 023205          125 VISCVGGFGS----NSYMYKINGTANINAIRAASEKGVKRFVYISA  166 (286)
Q Consensus       125 vi~~a~~~~~----~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss  166 (286)
                      |+.+||....    ....++.|......++...++.+.+-++.+-|
T Consensus        91 vvitag~~~~~~~~R~dll~~N~~i~~~i~~~i~~~~p~~ivivvt  136 (159)
T d2ldxa1          91 VIITAGARMVSGQTRLDLLQRNVAIMKAIVPGVIQNSPDCKIIVVT  136 (159)
T ss_dssp             EEECCSCCCCTTTCSSCTTHHHHHHHHHHTTTHHHHSTTCEEEECS
T ss_pred             EEEecccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeEEEEeC
Confidence            9999987532    23556778888888888888877765555554

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=97.54  E-value=0.00027  Score=54.85  Aligned_cols=65  Identities=17%  Similarity=0.107  Sum_probs=48.1

Q ss_pred             cCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhH----HHHHhcCCCEEEEccccCC
Q 023205           63 GGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDS----WKEALDGVTAVISCVGGFG  133 (286)
Q Consensus        63 GatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~----~~~~~~~~d~vi~~a~~~~  133 (286)
                      -+||.+|.+|++++..+|++|+++.-......    +..+..+...  ..++    +.+.+.++|++|++|+..+
T Consensus        29 ~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~~~----p~~~~~~~~~--t~~~m~~~~~~~~~~~D~~i~aAAvsD   97 (223)
T d1u7za_          29 HSSGKMGFAIAAAAARRGANVTLVSGPVSLPT----PPFVKRVDVM--TALEMEAAVNASVQQQNIFIGCAAVAD   97 (223)
T ss_dssp             CCCSHHHHHHHHHHHHTTCEEEEEECSCCCCC----CTTEEEEECC--SHHHHHHHHHHHGGGCSEEEECCBCCS
T ss_pred             CCcHHHHHHHHHHHHHcCCchhhhhcccccCc----ccccccceeh--hhHHHHHHHHhhhccceeEeeeechhh
Confidence            35899999999999999999999987654321    3466666543  3333    3445578999999999764

>d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Thermotoga maritima [TaxId: 2336]

Probab=97.53  E-value=7.2e-05  Score=55.88  Aligned_cols=73  Identities=8%  Similarity=0.149  Sum_probs=43.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCC-CeEEEEecCCCccc--ccccCCceeEEeccCCCHhHHHHHhcCCCEEEEcccc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRG-LTVASLSRSGRSSL--RDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG  131 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g-~~V~~l~R~~~~~~--~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~  131 (286)
                      |++|.|.||||++|..+++.|.++. .++..+..+.....  .........-......+.   +...+++|+||.+.+.
T Consensus         1 MikVaIvGATGyvG~eLirlL~~HP~~ei~~l~s~~~aG~~i~~~~p~~~~~~~~~~~~~---~~~~~~~dvvf~a~p~   76 (176)
T d1vkna1           1 MIRAGIIGATGYTGLELVRLLKNHPEAKITYLSSRTYAGKKLEEIFPSTLENSILSEFDP---EKVSKNCDVLFTALPA   76 (176)
T ss_dssp             CEEEEEESTTSHHHHHHHHHHHHCTTEEEEEEECSTTTTSBHHHHCGGGCCCCBCBCCCH---HHHHHHCSEEEECCST
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhCCCceEEEeeccccCCCcccccCchhhccccccccCH---hHhccccceEEEcccc
Confidence            5799999999999999999999876 36666654332211  111000011011112233   3445679999988644

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=97.52  E-value=0.00012  Score=54.01  Aligned_cols=65  Identities=18%  Similarity=0.260  Sum_probs=44.9

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCc-eeEEeccCCCHhHHHHHhcCCCEEEEccc
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANN-VIWHQGNLLSSDSWKEALDGVTAVISCVG  130 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~-~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~  130 (286)
                      |||.|.|. |.+|+.+++.|.++|++|++.+|+++..... ...+ +.... |  +    .++++++|+||.+..
T Consensus         1 MkI~iIG~-G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a-~~~~~~~~~~-~--~----~~~~~~~DiIilavp   66 (165)
T d2f1ka2           1 MKIGVVGL-GLIGASLAGDLRRRGHYLIGVSRQQSTCEKA-VERQLVDEAG-Q--D----LSLLQTAKIIFLCTP   66 (165)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHH-HHTTSCSEEE-S--C----GGGGTTCSEEEECSC
T ss_pred             CEEEEEee-cHHHHHHHHHHHHCCCEEEEEECCchHHHHH-HHhhccceee-e--e----cccccccccccccCc
Confidence            58999986 9999999999999999999999986442111 1111 11111 1  1    136789999998753

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.52  E-value=7.3e-05  Score=55.85  Aligned_cols=74  Identities=20%  Similarity=0.244  Sum_probs=49.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHH---HHh--cCCCEEEEccc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWK---EAL--DGVTAVISCVG  130 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~---~~~--~~~d~vi~~a~  130 (286)
                      ..+|||+||+|.+|...++.+...|.+|+++++++++. .....-+...+ .|..+.+..+   +..  +++|+||.+.|
T Consensus        29 g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~-~~~~~~Ga~~v-i~~~~~~~~~~i~~~t~~~g~d~v~d~~g  106 (174)
T d1yb5a2          29 GESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQ-KIVLQNGAHEV-FNHREVNYIDKIKKYVGEKGIDIIIEMLA  106 (174)
T ss_dssp             TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHH-HHHHHTTCSEE-EETTSTTHHHHHHHHHCTTCEEEEEESCH
T ss_pred             CCEEEEEeccccccccccccccccCccccccccccccc-ccccccCcccc-cccccccHHHHhhhhhccCCceEEeeccc
Confidence            56899999999999999999999999999999876442 11111122222 2555544333   333  25899999875


Q ss_pred             c
Q 023205          131 G  131 (286)
Q Consensus       131 ~  131 (286)
                      .
T Consensus       107 ~  107 (174)
T d1yb5a2         107 N  107 (174)
T ss_dssp             H
T ss_pred             H
Confidence            4

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=97.51  E-value=6.4e-05  Score=56.47  Aligned_cols=74  Identities=14%  Similarity=0.044  Sum_probs=50.6

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc-------cccCCceeEEeccCCCHhHHHHHhcCCCEEEEcc
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-------DSWANNVIWHQGNLLSSDSWKEALDGVTAVISCV  129 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a  129 (286)
                      |||.|.|+ |.+|..++..|.++|++|.+++|+++....       ....+..+..........+..++++++|+||.+.
T Consensus         2 k~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~aD~iii~v   80 (184)
T d1bg6a2           2 KTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILIVV   80 (184)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEEECS
T ss_pred             CEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCCchhhhhhhhhhhhhhhhhhhHhHhcCCCEEEEEE
Confidence            68999997 999999999999999999999998643211       0001112222222211234678889999999986


Q ss_pred             cc
Q 023205          130 GG  131 (286)
Q Consensus       130 ~~  131 (286)
                      ..
T Consensus        81 ~~   82 (184)
T d1bg6a2          81 PA   82 (184)
T ss_dssp             CG
T ss_pred             ch
Confidence            43

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=97.51  E-value=0.00026  Score=51.65  Aligned_cols=105  Identities=15%  Similarity=0.084  Sum_probs=64.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC----e-E--EEEecCCCccc--------ccccCCceeEEeccCCCHhHHHHHhc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGL----T-V--ASLSRSGRSSL--------RDSWANNVIWHQGNLLSSDSWKEALD  120 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~----~-V--~~l~R~~~~~~--------~~~~~~~~~~i~~Dl~d~~~~~~~~~  120 (286)
                      ++||.|+||+|++|++++-.|...+.    . +  ..+.-......        .........-+...    ....+.++
T Consensus         4 p~KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~   79 (154)
T d1y7ta1           4 PVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEAT----DDPKVAFK   79 (154)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEE----SCHHHHTT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhccccccccccccC----Cchhhhcc
Confidence            46999999999999999999998752    1 1  11111111100        00111223322222    22457889


Q ss_pred             CCCEEEEccccCCCc----chhhhhhhHHHHHHHHHHHHcCC-CEEEEE
Q 023205          121 GVTAVISCVGGFGSN----SYMYKINGTANINAIRAASEKGV-KRFVYI  164 (286)
Q Consensus       121 ~~d~vi~~a~~~~~~----~~~~~~~~~~~~~l~~~a~~~~v-~~~v~~  164 (286)
                      ++|+||.++|....+    .+.+..|......+.+...+... .-+|.+
T Consensus        80 ~advViitaG~~~~pg~~r~dl~~~N~~i~~~~~~~i~k~a~~~~~viv  128 (154)
T d1y7ta1          80 DADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLV  128 (154)
T ss_dssp             TCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred             cccEEEeecCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCCcEEEE
Confidence            999999999976433    34567788888888888887543 334443

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=97.50  E-value=3.9e-05  Score=56.51  Aligned_cols=72  Identities=19%  Similarity=0.261  Sum_probs=52.7

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccccC
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGF  132 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~~  132 (286)
                      ..++|||.|+ |.+|..+++.|.+.|. ++++..|+.++.......-+.+.     .+.+++.+.+.++|+||.+.+..
T Consensus        23 ~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~~~~-----~~~~~~~~~l~~~Divi~atss~   95 (159)
T d1gpja2          23 HDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGEA-----VRFDELVDHLARSDVVVSATAAP   95 (159)
T ss_dssp             TTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCEE-----CCGGGHHHHHHTCSEEEECCSSS
T ss_pred             ccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhhccc-----ccchhHHHHhccCCEEEEecCCC
Confidence            3679999997 9999999999999997 69999998655321111112222     24467788899999999997653

>d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=97.45  E-value=9.3e-05  Score=54.15  Aligned_cols=91  Identities=16%  Similarity=0.195  Sum_probs=50.1

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC---eEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccccCCC
Q 023205           58 KLLVLGGNGFVGSHICREALDRGL---TVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFGS  134 (286)
Q Consensus        58 ~VlVtGatG~iG~~l~~~Ll~~g~---~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~~~~  134 (286)
                      +|.|.||||++|..+++.|.++.+   ++..+..+.......... .-.....+..+     ..+.++|.++.+++..  
T Consensus         3 kVaIvGATGyvG~eLirlL~~H~fp~~~l~~~~s~~s~G~~~~~~-~~~~~~~~~~~-----~~~~~~d~~f~~~~~~--   74 (154)
T d2gz1a1           3 TVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSAGKSLKFK-DQDITIEETTE-----TAFEGVDIALFSAGSS--   74 (154)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCCSCEEEEEEEECGGGTTCEEEET-TEEEEEEECCT-----TTTTTCSEEEECSCHH--
T ss_pred             EEEEECCCcHHHHHHHHHHHcCCCCceEEEEeccccccccccccc-CCcccccccch-----hhhhhhhhhhhccCcc--
Confidence            799999999999999999888854   444443222111100000 11111112211     2456789988886541  


Q ss_pred             cchhhhhhhHHHHHHHHHHHHcCCCEEEEEecC
Q 023205          135 NSYMYKINGTANINAIRAASEKGVKRFVYISAA  167 (286)
Q Consensus       135 ~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~  167 (286)
                                .....+..+.+.+. ++|=.|+.
T Consensus        75 ----------~s~~~~~~~~~~~~-~VIDlSsd   96 (154)
T d2gz1a1          75 ----------TSAKYAPYAVKAGV-VVVDNTSY   96 (154)
T ss_dssp             ----------HHHHHHHHHHHTTC-EEEECSST
T ss_pred             ----------chhhHHhhhccccc-eehhcChh
Confidence                      22234444555665 67777763

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.42  E-value=0.00053  Score=48.18  Aligned_cols=73  Identities=18%  Similarity=0.161  Sum_probs=51.8

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccccCCCcc
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFGSNS  136 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~~~~~~  136 (286)
                      |||.|.|++|.+|+.+.+.+.++++++.+..-...                        ...+.++|+||....|     
T Consensus         1 mki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~~------------------------~~~~~~~DVvIDFS~p-----   51 (128)
T d1vm6a3           1 MKYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNG------------------------VEELDSPDVVIDFSSP-----   51 (128)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTE------------------------EEECSCCSEEEECSCG-----
T ss_pred             CEEEEECCCCHHHHHHHHHHhcCCCeEEEEECCCc------------------------HHHhccCCEEEEecCH-----
Confidence            58999999999999999999999988775431110                        0123568999987544     


Q ss_pred             hhhhhhhHHHHHHHHHHHHcCCCEEEEEec
Q 023205          137 YMYKINGTANINAIRAASEKGVKRFVYISA  166 (286)
Q Consensus       137 ~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss  166 (286)
                             .++.+.++.|.++++ .+|.-+|
T Consensus        52 -------~~~~~~l~~~~~~~~-p~ViGTT   73 (128)
T d1vm6a3          52 -------EALPKTVDLCKKYRA-GLVLGTT   73 (128)
T ss_dssp             -------GGHHHHHHHHHHHTC-EEEECCC
T ss_pred             -------HHHHHHHHHHHhcCC-CEEEEcC
Confidence                   345577889988887 4554444

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=97.41  E-value=0.00014  Score=54.66  Aligned_cols=76  Identities=22%  Similarity=0.235  Sum_probs=51.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc-cccCCceeEEeccCCCHhHHHHHh--cCCCEEEEcccc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-DSWANNVIWHQGNLLSSDSWKEAL--DGVTAVISCVGG  131 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~-~~~~~~~~~i~~Dl~d~~~~~~~~--~~~d~vi~~a~~  131 (286)
                      ..+|||+||+|.+|...++.....|.+|++++|++++... +.......+..-|-...+.+.+..  +++|+||.+.|.
T Consensus        30 G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~Ga~~vi~~~~~~~~~~~~~~~~~~Gvd~v~D~vG~  108 (182)
T d1v3va2          30 GETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQIGFDAAFNYKTVNSLEEALKKASPDGYDCYFDNVGG  108 (182)
T ss_dssp             SCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTSCSCHHHHHHHHCTTCEEEEEESSCH
T ss_pred             CCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHHHHHhhhhhhhcccccccHHHHHHHHhhcCCCceeEEecCc
Confidence            5789999999999999999999999999999988654211 111112222222332333333333  369999999764

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.39  E-value=8.7e-05  Score=47.24  Aligned_cols=37  Identities=24%  Similarity=0.311  Sum_probs=33.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRS   92 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~   92 (286)
                      .++|+|+||+|.+|...++.+...|++|++.++++++
T Consensus        32 ~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k   68 (77)
T d1o8ca2          32 DGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGREST   68 (77)
T ss_dssp             GCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGG
T ss_pred             CCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHH
Confidence            4689999999999999999988899999999998755

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.39  E-value=0.00028  Score=51.51  Aligned_cols=107  Identities=12%  Similarity=-0.031  Sum_probs=64.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC-------eEEEEecCCCcccc--------cccCCceeEEeccCCCHhHHHHHhc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGL-------TVASLSRSGRSSLR--------DSWANNVIWHQGNLLSSDSWKEALD  120 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~-------~V~~l~R~~~~~~~--------~~~~~~~~~i~~Dl~d~~~~~~~~~  120 (286)
                      ++||.|+||+|.+|++++-.|+..+.       ++..++.+......        .........+..-    .+..+.++
T Consensus         3 p~KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~----~~~~~~~~   78 (154)
T d5mdha1           3 PIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIAT----DKEEIAFK   78 (154)
T ss_dssp             CEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEEEE----SCHHHHTT
T ss_pred             ceEEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhcccccccccccccC----cccccccC
Confidence            56999999999999999999986541       34444433322110        0011122222111    12456789


Q ss_pred             CCCEEEEccccCCC----cchhhhhhhHHHHHHHHHHHHc-CCCEEEEEec
Q 023205          121 GVTAVISCVGGFGS----NSYMYKINGTANINAIRAASEK-GVKRFVYISA  166 (286)
Q Consensus       121 ~~d~vi~~a~~~~~----~~~~~~~~~~~~~~l~~~a~~~-~v~~~v~~Ss  166 (286)
                      ++|+||.++|....    ..+.++.|..-...+.+...+. +-.-++.+-|
T Consensus        79 ~~dvVVitag~~~~~g~sr~dll~~N~~i~k~~~~~i~k~a~~~~~iivvs  129 (154)
T d5mdha1          79 DLDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVG  129 (154)
T ss_dssp             TCSEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             CceEEEEecccCCCCCCchhHHHHHhHHHHHHHHHHHHhhCCCceEEEEec
Confidence            99999999987543    2355678888888888887664 4333344433

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.38  E-value=0.00029  Score=52.84  Aligned_cols=74  Identities=16%  Similarity=0.185  Sum_probs=50.7

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc----cc-c--CCceeEEeccCCCHhHHHHHhcCCCEEEEcc
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR----DS-W--ANNVIWHQGNLLSSDSWKEALDGVTAVISCV  129 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~----~~-~--~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a  129 (286)
                      |+|.|.|+ |..|..++..|.+.|++|++..|+.++..-    .. .  .-+..+-..++.-.++++++++++|.||.+.
T Consensus         1 MkI~ViGa-G~~GtalA~~la~~g~~V~l~~r~~~~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ad~Ii~av   79 (180)
T d1txga2           1 MIVSILGA-GAMGSALSVPLVDNGNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEVVLLGV   79 (180)
T ss_dssp             CEEEEESC-CHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSEEEECS
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCEEEEEEecccHHHHHHHhhhhhhhhhcchhccccccccccHHHHHhccchhhccc
Confidence            68999997 999999999999999999999986443110    00 0  0011111112233567888999999999886


Q ss_pred             cc
Q 023205          130 GG  131 (286)
Q Consensus       130 ~~  131 (286)
                      ..
T Consensus        80 ps   81 (180)
T d1txga2          80 ST   81 (180)
T ss_dssp             CG
T ss_pred             ch
Confidence            43

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.36  E-value=0.00012  Score=54.72  Aligned_cols=75  Identities=21%  Similarity=0.150  Sum_probs=47.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHh--cCCCEEEEcccc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEAL--DGVTAVISCVGG  131 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~--~~~d~vi~~a~~  131 (286)
                      ..+|||+||+|.+|...++.....|.+|++.++++++........--.++.-+-.+.+ .....  +++|+||.+.|.
T Consensus        32 g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~~~lGa~~vi~~~~~~~~-~~~~~~~~gvD~vid~vgg  108 (176)
T d1xa0a2          32 RGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRVLGAKEVLAREDVMAE-RIRPLDKQRWAAAVDPVGG  108 (176)
T ss_dssp             GCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHHTTCSEEEECC----------CCSCCEEEEEECSTT
T ss_pred             CCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHHHhcccceeeecchhHHH-HHHHhhccCcCEEEEcCCc
Confidence            4589999999999999999999999999999998776322111111122221111112 22222  368999999875

>d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=97.32  E-value=0.00086  Score=47.17  Aligned_cols=86  Identities=19%  Similarity=0.185  Sum_probs=60.5

Q ss_pred             CCeEEEEcCC---ChhHHHHHHHHHHCC-CeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEcccc
Q 023205           56 SEKLLVLGGN---GFVGSHICREALDRG-LTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG  131 (286)
Q Consensus        56 ~~~VlVtGat---G~iG~~l~~~Ll~~g-~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~  131 (286)
                      +++|.|.|++   +..|..+++.|.+.+ ++|+.+....+..      .++.. .-++.|      +=..+|.++.+..+
T Consensus         8 PksIAVVGaS~~~~~~g~~v~~~L~~~~~g~v~pVnP~~~~i------~G~~~-y~sl~d------lp~~vDlvvi~vp~   74 (129)
T d2csua1           8 PKGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVNIKEEEV------QGVKA-YKSVKD------IPDEIDLAIIVVPK   74 (129)
T ss_dssp             CSEEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEECSSCSEE------TTEEC-BSSTTS------CSSCCSEEEECSCH
T ss_pred             CCeEEEEccCCCCCCcHHHHHHHHHHcCCCcEEEeccCcccc------CCeEe-ecchhh------cCCCCceEEEecCh
Confidence            5799999998   999999999987765 6899887654331      12221 123332      23468998887543


Q ss_pred             CCCcchhhhhhhHHHHHHHHHHHHcCCCEEEEEec
Q 023205          132 FGSNSYMYKINGTANINAIRAASEKGVKRFVYISA  166 (286)
Q Consensus       132 ~~~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss  166 (286)
                                  ..+..+++.|.+.|++.++.+|+
T Consensus        75 ------------~~~~~~~~~~~~~g~~~~vi~s~   97 (129)
T d2csua1          75 ------------RFVKDTLIQCGEKGVKGVVIITA   97 (129)
T ss_dssp             ------------HHHHHHHHHHHHHTCCEEEECCC
T ss_pred             ------------HHhHHHHHHHHHcCCCEEEEecc
Confidence                        34456788999999998888887

>d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative semialdehyde dehydrogenase
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=97.32  E-value=5.4e-05  Score=57.17  Aligned_cols=32  Identities=22%  Similarity=0.487  Sum_probs=27.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC-eEEEEe
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGL-TVASLS   87 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~-~V~~l~   87 (286)
                      +.||.|.||||++|..+++.|.++.+ ++..+.
T Consensus         5 kikVaIlGATGyvG~elirLL~~HP~~ei~~l~   37 (183)
T d2cvoa1           5 EVRIAVLGASGYTGAEIVRLLANHPQFRIKVMT   37 (183)
T ss_dssp             CEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEE
T ss_pred             ccEEEEECcccHHHHHHHHHHHhCCCceEEEEe
Confidence            56899999999999999999998863 666554

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.28  E-value=0.0012  Score=45.21  Aligned_cols=93  Identities=18%  Similarity=0.208  Sum_probs=65.5

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccc-cCCceeEEeccCCCHhHHHHHhcCCCEEEEccccCC
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDS-WANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFG  133 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~-~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~~~  133 (286)
                      ..++|+|.|+ |.+|..-++.|++.|.+|++.+....+..... ...+++++..++.+.     .+.+++.|+.+.+.  
T Consensus        11 ~~k~vlVvG~-G~va~~ka~~ll~~ga~v~v~~~~~~~~~~~~~~~~~i~~~~~~~~~~-----dl~~~~lv~~at~d--   82 (113)
T d1pjqa1          11 RDRDCLIVGG-GDVAERKARLLLEAGARLTVNALTFIPQFTVWANEGMLTLVEGPFDET-----LLDSCWLAIAATDD--   82 (113)
T ss_dssp             BTCEEEEECC-SHHHHHHHHHHHHTTBEEEEEESSCCHHHHHHHTTTSCEEEESSCCGG-----GGTTCSEEEECCSC--
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeccCChHHHHHHhcCCceeeccCCCHH-----HhCCCcEEeecCCC--
Confidence            3679999996 99999999999999999999988766543322 235788888777542     36678888876422  


Q ss_pred             CcchhhhhhhHHHHHHHHHHHHcCCCEEEEEec
Q 023205          134 SNSYMYKINGTANINAIRAASEKGVKRFVYISA  166 (286)
Q Consensus       134 ~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss  166 (286)
                       .        .-...+.+.|++.++  +|++..
T Consensus        83 -~--------~~n~~i~~~a~~~~i--lVNv~D  104 (113)
T d1pjqa1          83 -D--------TVNQRVSDAAESRRI--FCNVVD  104 (113)
T ss_dssp             -H--------HHHHHHHHHHHHTTC--EEEETT
T ss_pred             -H--------HHHHHHHHHHHHcCC--EEEeCC
Confidence             1        112355778887764  566554

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=97.26  E-value=0.00016  Score=53.23  Aligned_cols=91  Identities=20%  Similarity=0.288  Sum_probs=57.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHC-CCeEEEE-ecCCCccccccc-------CCceeEEeccCCCHhHHHHHhcCCCEEE
Q 023205           56 SEKLLVLGGNGFVGSHICREALDR-GLTVASL-SRSGRSSLRDSW-------ANNVIWHQGNLLSSDSWKEALDGVTAVI  126 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~-g~~V~~l-~R~~~~~~~~~~-------~~~~~~i~~Dl~d~~~~~~~~~~~d~vi  126 (286)
                      .++|.|.|++|.+|+.+++.+.+. +.++.+. +|...+......       ..++.+ .-      +++.+++.+|+||
T Consensus         4 ~ikI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~~~g~d~~~~~~~~~~~~~~-~~------~~~~~~~~~DViI   76 (162)
T d1diha1           4 NIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTV-QS------SLDAVKDDFDVFI   76 (162)
T ss_dssp             BEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCE-ES------CSTTTTTSCSEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecccchhccchhhhhhccccCCcee-ec------cHHHHhcccceEE
Confidence            468999999999999999999987 4566544 443332211110       111111 22      2345677899999


Q ss_pred             EccccCCCcchhhhhhhHHHHHHHHHHHHcCCCEEEEEec
Q 023205          127 SCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISA  166 (286)
Q Consensus       127 ~~a~~~~~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss  166 (286)
                      ....|            .++...++.|.+.++ .+|.-+|
T Consensus        77 DFs~p------------~~~~~~~~~a~~~~~-~~ViGTT  103 (162)
T d1diha1          77 DFTRP------------EGTLNHLAFCRQHGK-GMVIGTT  103 (162)
T ss_dssp             ECSCH------------HHHHHHHHHHHHTTC-EEEECCC
T ss_pred             EeccH------------HHHHHHHHHHHhccc-eeEEecC
Confidence            88543            345577889988987 4554444

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=97.22  E-value=0.00021  Score=50.44  Aligned_cols=69  Identities=19%  Similarity=0.209  Sum_probs=54.4

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHH-hcCCCEEEEcc
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEA-LDGVTAVISCV  129 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~-~~~~d~vi~~a  129 (286)
                      |+|+|.|. |-+|..+++.|  ++++|.++..+++... .....++.++.||.++++.++++ ++.++.++-+.
T Consensus         1 kHivI~G~-g~~g~~l~~~L--~~~~i~vi~~d~~~~~-~~~~~~~~~i~Gd~~~~~~L~~a~i~~A~~vi~~~   70 (129)
T d2fy8a1           1 RHVVICGW-SESTLECLREL--RGSEVFVLAEDENVRK-KVLRSGANFVHGDPTRVSDLEKANVRGARAVIVNL   70 (129)
T ss_dssp             CCEEEESC-CHHHHHHHHTS--CGGGEEEEESCTTHHH-HHHHTTCEEEESCTTSHHHHHHTTCTTCSEEEECC
T ss_pred             CEEEEECC-CHHHHHHHHHH--cCCCCEEEEcchHHHH-HHHhcCccccccccCCHHHHHHhhhhcCcEEEEec
Confidence            46899996 99999999998  4667888888766532 22345899999999999988875 56799999764

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=97.20  E-value=0.00067  Score=50.84  Aligned_cols=76  Identities=14%  Similarity=0.193  Sum_probs=58.3

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCCCccccc-----c--cCCceeEEeccCCCHhHHHHHhcCCCEEE
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSLRD-----S--WANNVIWHQGNLLSSDSWKEALDGVTAVI  126 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~~~-----~--~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi  126 (286)
                      ..++|+|.|+ |..|+.++..|.+.|. ++++.+|+++.....     .  ..........|+.+.+.+...+..+|.||
T Consensus        17 ~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~diiI   95 (182)
T d1vi2a1          17 KGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALASADILT   95 (182)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTCSEEE
T ss_pred             CCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeecccccchhhhhcccceec
Confidence            3579999997 8999999999999985 889999987653210     0  11133455678889899999999999999


Q ss_pred             Ecccc
Q 023205          127 SCVGG  131 (286)
Q Consensus       127 ~~a~~  131 (286)
                      ++.+.
T Consensus        96 N~Tp~  100 (182)
T d1vi2a1          96 NGTKV  100 (182)
T ss_dssp             ECSST
T ss_pred             cccCC
Confidence            99753

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=97.18  E-value=0.00028  Score=51.32  Aligned_cols=66  Identities=21%  Similarity=0.207  Sum_probs=47.1

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEcccc
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG  131 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~  131 (286)
                      |||.|.| .|.+|+.+++.|+++|++|++.+|++++..... ..++.+.       ++..++++++|+||.+..+
T Consensus         1 MkIgiIG-~G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~~~-~~~~~~~-------~~~~e~~~~~diIi~~v~~   66 (152)
T d1i36a2           1 LRVGFIG-FGEVAQTLASRLRSRGVEVVTSLEGRSPSTIER-ARTVGVT-------ETSEEDVYSCPVVISAVTP   66 (152)
T ss_dssp             CEEEEES-CSHHHHHHHHHHHHTTCEEEECCTTCCHHHHHH-HHHHTCE-------ECCHHHHHTSSEEEECSCG
T ss_pred             CEEEEEc-HHHHHHHHHHHHHHCCCeEEEEcCchhHHHHHh-hhccccc-------ccHHHHHhhcCeEEEEecC
Confidence            5799998 599999999999999999999888766532211 1111111       1234678899999999643

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=97.18  E-value=0.00062  Score=44.47  Aligned_cols=85  Identities=16%  Similarity=0.033  Sum_probs=59.3

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccccCCCcc
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFGSNS  136 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~~~~~~  136 (286)
                      |+|.++|-.|-==+.|++.|.++|++|.+.++...+........++++..+.  +++.    ++++|.||...+...++.
T Consensus         2 ~~ihfiGIgG~GMs~LA~~L~~~G~~VsGSD~~~~~~t~~L~~~Gi~i~~gh--~~~~----i~~~d~vV~SsAI~~~np   75 (89)
T d1j6ua1           2 MKIHFVGIGGIGMSAVALHEFSNGNDVYGSNIEETERTAYLRKLGIPIFVPH--SADN----WYDPDLVIKTPAVRDDNP   75 (89)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTCCEESSC--CTTS----CCCCSEEEECTTCCTTCH
T ss_pred             cEEEEEeECHHHHHHHHHHHHhCCCeEEEEeCCCChhHHHHHHCCCeEEeee--cccc----cCCCCEEEEecCcCCCCH
Confidence            5788888744433478999999999999999987654444445577776542  3332    367899998877655544


Q ss_pred             hhhhhhhHHHHHHHHHHHHcCCC
Q 023205          137 YMYKINGTANINAIRAASEKGVK  159 (286)
Q Consensus       137 ~~~~~~~~~~~~l~~~a~~~~v~  159 (286)
                      +            +++|++.+++
T Consensus        76 e------------l~~A~~~gIp   86 (89)
T d1j6ua1          76 E------------IVRARMERVP   86 (89)
T ss_dssp             H------------HHHHHHTTCC
T ss_pred             H------------HHHHHHcCCC
Confidence            3            6677777764

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=97.15  E-value=0.00012  Score=54.92  Aligned_cols=74  Identities=23%  Similarity=0.194  Sum_probs=50.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHh---HHHHHh--cCCCEEEEccc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSD---SWKEAL--DGVTAVISCVG  130 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~---~~~~~~--~~~d~vi~~a~  130 (286)
                      ..+|+|+||+|.+|..+++.....|.+|++.++++++.........-+++  |..+++   .+.+.-  +++|+|+.+.+
T Consensus        29 g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~~lGa~~vi--~~~~~d~~~~v~~~t~g~g~d~v~d~~g  106 (179)
T d1qora2          29 DEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKAGAWQVI--NYREEDLVERLKEITGGKKVRVVYDSVG  106 (179)
T ss_dssp             TCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCSEEE--ETTTSCHHHHHHHHTTTCCEEEEEECSC
T ss_pred             CCEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHHHHhcCCeEEE--ECCCCCHHHHHHHHhCCCCeEEEEeCcc
Confidence            46899999999999999999999999999999997653211111111233  444433   333333  24799999876


Q ss_pred             c
Q 023205          131 G  131 (286)
Q Consensus       131 ~  131 (286)
                      .
T Consensus       107 ~  107 (179)
T d1qora2         107 R  107 (179)
T ss_dssp             G
T ss_pred             H
Confidence            5

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.11  E-value=0.00038  Score=52.09  Aligned_cols=74  Identities=23%  Similarity=0.210  Sum_probs=50.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCH---hHHHHHh--cCCCEEEEccc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSS---DSWKEAL--DGVTAVISCVG  130 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~---~~~~~~~--~~~d~vi~~a~  130 (286)
                      ..+|||+||+|.+|...++.+...|.+|+++++++++. ......+...+ .|..++   +.+.+..  +++|+||.+.|
T Consensus        26 g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~-~~l~~~Ga~~v-i~~~~~~~~~~v~~~t~~~g~d~v~d~~g  103 (183)
T d1pqwa_          26 GERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKR-EMLSRLGVEYV-GDSRSVDFADEILELTDGYGVDVVLNSLA  103 (183)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHH-HHHHTTCCSEE-EETTCSTHHHHHHHHTTTCCEEEEEECCC
T ss_pred             CCEEEEECCCCCcccccchhhccccccceeeecccccc-ccccccccccc-ccCCccCHHHHHHHHhCCCCEEEEEeccc
Confidence            46899999999999999999988999999999876542 11112232322 234443   3333333  36999999987


Q ss_pred             c
Q 023205          131 G  131 (286)
Q Consensus       131 ~  131 (286)
                      .
T Consensus       104 ~  104 (183)
T d1pqwa_         104 G  104 (183)
T ss_dssp             T
T ss_pred             c
Confidence            3

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=97.06  E-value=0.0016  Score=43.12  Aligned_cols=86  Identities=14%  Similarity=0.181  Sum_probs=59.4

Q ss_pred             CCCeEEEEcCCChhH-HHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccccCC
Q 023205           55 PSEKLLVLGGNGFVG-SHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFG  133 (286)
Q Consensus        55 ~~~~VlVtGatG~iG-~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~~~  133 (286)
                      ..++|.+.|- |.+| +.|++.|.++|++|.+.++............++.+..++-  ++    -+.++|.||...+...
T Consensus         7 ~~~~ihfiGi-gG~GMs~LA~~L~~~G~~VsGSD~~~~~~~~~L~~~Gi~v~~g~~--~~----~i~~~d~vV~S~AI~~   79 (96)
T d1p3da1           7 RVQQIHFIGI-GGAGMSGIAEILLNEGYQISGSDIADGVVTQRLAQAGAKIYIGHA--EE----HIEGASVVVVSSAIKD   79 (96)
T ss_dssp             TCCEEEEETT-TSTTHHHHHHHHHHHTCEEEEEESCCSHHHHHHHHTTCEEEESCC--GG----GGTTCSEEEECTTSCT
T ss_pred             hCCEEEEEEE-CHHHHHHHHHHHHhCCCEEEEEeCCCChhhhHHHHCCCeEEECCc--cc----cCCCCCEEEECCCcCC
Confidence            3578999886 4444 7789999999999999999866544444445777766553  33    2467899988877654


Q ss_pred             CcchhhhhhhHHHHHHHHHHHHcCCC
Q 023205          134 SNSYMYKINGTANINAIRAASEKGVK  159 (286)
Q Consensus       134 ~~~~~~~~~~~~~~~l~~~a~~~~v~  159 (286)
                      ++.+            +.+|++.|++
T Consensus        80 ~npe------------l~~A~~~gip   93 (96)
T d1p3da1          80 DNPE------------LVTSKQKRIP   93 (96)
T ss_dssp             TCHH------------HHHHHHTTCC
T ss_pred             CCHH------------HHHHHHcCCC
Confidence            4433            5567777764

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.06  E-value=0.00016  Score=53.19  Aligned_cols=65  Identities=15%  Similarity=0.202  Sum_probs=47.6

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccc
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVG  130 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~  130 (286)
                      |+|.|.|- |.+|+.+++.|+++|++|++.+|++++..... ..+...       .++..++++++|+||.|..
T Consensus         1 MkIgiIGl-G~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~-~~~~~~-------~~~~~e~~~~~d~ii~~v~   65 (161)
T d1vpda2           1 MKVGFIGL-GIMGKPMSKNLLKAGYSLVVSDRNPEAIADVI-AAGAET-------ASTAKAIAEQCDVIITMLP   65 (161)
T ss_dssp             CEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTCEE-------CSSHHHHHHHCSEEEECCS
T ss_pred             CEEEEEeh-hHHHHHHHHHHHHCCCeEEEEeCCcchhHHHH-Hhhhhh-------cccHHHHHhCCCeEEEEcC
Confidence            57999985 99999999999999999999999876532211 112221       1234567788999999864

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.05  E-value=0.00029  Score=51.80  Aligned_cols=67  Identities=16%  Similarity=0.233  Sum_probs=48.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEcccc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG  131 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~  131 (286)
                      |++|.+.| .|.+|+.+++.|+++||+|.+.+|++++...... .+..       ......++++.+|+|+-+...
T Consensus         1 M~kIg~IG-lG~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~~-~~~~-------~~~~~~e~~~~~diii~~v~~   67 (162)
T d3cuma2           1 MKQIAFIG-LGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVA-AGAS-------AARSARDAVQGADVVISMLPA   67 (162)
T ss_dssp             CCEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHH-TTCE-------ECSSHHHHHTSCSEEEECCSC
T ss_pred             CCEEEEEE-EHHHHHHHHHHHHHCCCeEEEEECchhhhhhhhh-hhcc-------ccchhhhhccccCeeeecccc
Confidence            56899998 5999999999999999999999998655221111 1111       112355778889999988643

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=97.03  E-value=0.0019  Score=48.15  Aligned_cols=66  Identities=24%  Similarity=0.258  Sum_probs=51.3

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccccCC
Q 023205           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFG  133 (286)
Q Consensus        54 ~~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~~~  133 (286)
                      ...++|.|.|. |.||+.+++.|..-|.+|++.+|.+.+..              ..-.++++++++.+|+|+.+.....
T Consensus        40 l~gk~vgIiG~-G~IG~~va~~l~~~g~~v~~~d~~~~~~~--------------~~~~~~l~ell~~sDiv~~~~pl~~  104 (181)
T d1qp8a1          40 IQGEKVAVLGL-GEIGTRVGKILAALGAQVRGFSRTPKEGP--------------WRFTNSLEEALREARAAVCALPLNK  104 (181)
T ss_dssp             CTTCEEEEESC-STHHHHHHHHHHHTTCEEEEECSSCCCSS--------------SCCBSCSHHHHTTCSEEEECCCCST
T ss_pred             ccCceEEEecc-ccccccceeeeeccccccccccccccccc--------------eeeeechhhhhhccchhhccccccc
Confidence            34689999995 99999999999999999999998865421              1112347789999999998876544


Q ss_pred             C
Q 023205          134 S  134 (286)
Q Consensus       134 ~  134 (286)
                      .
T Consensus       105 ~  105 (181)
T d1qp8a1         105 H  105 (181)
T ss_dssp             T
T ss_pred             c
Confidence            3

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=97.01  E-value=0.00013  Score=55.33  Aligned_cols=74  Identities=14%  Similarity=0.166  Sum_probs=49.8

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCccc-------ccccCCceeEEeccCCCHhHHHHHhcCCCEEEE
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSL-------RDSWANNVIWHQGNLLSSDSWKEALDGVTAVIS  127 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~-------~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~  127 (286)
                      .|++|.|.|| |..|.+++..|.+.|++|++..|+++...       .....+++++ .-++.-..+++++++++|.||.
T Consensus         6 ~m~KI~ViGa-G~wGtAlA~~La~~g~~V~l~~r~~~~~~~i~~~~~n~~yl~~~~l-~~~i~~t~~l~~a~~~ad~iii   83 (189)
T d1n1ea2           6 YLNKAVVFGS-GAFGTALAMVLSKKCREVCVWHMNEEEVRLVNEKRENVLFLKGVQL-ASNITFTSDVEKAYNGAEIILF   83 (189)
T ss_dssp             CEEEEEEECC-SHHHHHHHHHHHTTEEEEEEECSCHHHHHHHHHHTBCTTTSTTCBC-CTTEEEESCHHHHHTTCSCEEE
T ss_pred             eeceEEEECC-CHHHHHHHHHHHHcCCeEEEEEecHHHHHHHhhccccccccccccc-ccccccchhhhhccCCCCEEEE
Confidence            3568999996 99999999999999999999999754311       0111122211 0111112347788999999998


Q ss_pred             ccc
Q 023205          128 CVG  130 (286)
Q Consensus       128 ~a~  130 (286)
                      +..
T Consensus        84 avP   86 (189)
T d1n1ea2          84 VIP   86 (189)
T ss_dssp             CSC
T ss_pred             cCc
Confidence            864

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=97.00  E-value=0.00047  Score=51.12  Aligned_cols=68  Identities=12%  Similarity=0.119  Sum_probs=46.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc--cccC--CceeEEeccCCCHhHHHHHhcCCCEEEEcccc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSWA--NNVIWHQGNLLSSDSWKEALDGVTAVISCVGG  131 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~--~~~~--~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~  131 (286)
                      .++|+|.|+ |..++.++..|.+.|.+|+++.|+.++...  +...  ..++.+  ++.+.     ....+|+||++...
T Consensus        18 ~k~vlIlGa-GGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~~~~~~~--~~~~~-----~~~~~dliIN~Tp~   89 (170)
T d1nyta1          18 GLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQAL--SMDEL-----EGHEFDLIINATSS   89 (170)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEEC--CSGGG-----TTCCCSEEEECCSC
T ss_pred             CCEEEEECC-cHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhhccccccc--ccccc-----cccccceeeccccc
Confidence            579999997 899999999999999999999998765321  1111  122222  22221     13568999999743

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=96.95  E-value=0.00082  Score=49.55  Aligned_cols=73  Identities=19%  Similarity=0.105  Sum_probs=52.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEcccc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG  131 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~  131 (286)
                      ..+|+|.|+ |.+|...++.+...|.++++++++.++... ...-+...+ .|..+.+......+++|++|.+.+.
T Consensus        31 G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~~~-a~~lGad~~-i~~~~~~~~~~~~~~~D~vid~~g~  103 (168)
T d1uufa2          31 GKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREA-AKALGADEV-VNSRNADEMAAHLKSFDFILNTVAA  103 (168)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHH-HHHHTCSEE-EETTCHHHHHTTTTCEEEEEECCSS
T ss_pred             CCEEEEecc-chHHHHHHHHhhcccccchhhccchhHHHH-HhccCCcEE-EECchhhHHHHhcCCCceeeeeeec
Confidence            568999996 999999999988899999999987665211 111122211 3566777666777889999999874

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.93  E-value=0.00038  Score=51.44  Aligned_cols=73  Identities=19%  Similarity=0.207  Sum_probs=48.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCce-eEEeccCC-CHhHHHHHhcCCCEEEEccccC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNV-IWHQGNLL-SSDSWKEALDGVTAVISCVGGF  132 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~-~~i~~Dl~-d~~~~~~~~~~~d~vi~~a~~~  132 (286)
                      ..+|+|.|+ |.+|...++.+...|.+|+++++++++..... .-+. +++  |.. +.+..+...+++|+++.+.+..
T Consensus        28 g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a~-~lGa~~~i--~~~~~~~~~~~~~~~~d~vi~~~~~~  102 (168)
T d1piwa2          28 GKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAM-KMGADHYI--ATLEEGDWGEKYFDTFDLIVVCASSL  102 (168)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHH-HHTCSEEE--EGGGTSCHHHHSCSCEEEEEECCSCS
T ss_pred             CCEEEEECC-CCcchhHHHHhhhccccccccccchhHHHHhh-ccCCcEEe--eccchHHHHHhhhcccceEEEEecCC
Confidence            568999997 99999999888888999999999876532111 1122 222  222 2334455566789999887653

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=96.88  E-value=0.00018  Score=53.28  Aligned_cols=37  Identities=24%  Similarity=0.303  Sum_probs=33.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRS   92 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~   92 (286)
                      ..+|||+||+|.+|...++.....|.+|+++++++++
T Consensus        24 ~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k   60 (167)
T d1tt7a2          24 KGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREA   60 (167)
T ss_dssp             GCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSST
T ss_pred             CCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHH
Confidence            3469999999999999999888889999999998766

>d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PF0725
species: Pyrococcus furiosus [TaxId: 2261]

Probab=96.84  E-value=0.0032  Score=43.18  Aligned_cols=85  Identities=18%  Similarity=0.293  Sum_probs=57.6

Q ss_pred             CeEEEEcCC---ChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccccCC
Q 023205           57 EKLLVLGGN---GFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFG  133 (286)
Q Consensus        57 ~~VlVtGat---G~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~~~  133 (286)
                      |+|.|.|++   +..|..+++.|++.||+|+.+..+.+.-      .++..+       .++.++-+.+|.++.+..+  
T Consensus         2 KsIAVvGaS~~~~k~g~~v~~~L~~~g~~V~pVnP~~~~i------~G~~~y-------~sl~~lp~~~D~vvi~vp~--   66 (116)
T d1y81a1           2 RKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDEI------EGLKCY-------RSVRELPKDVDVIVFVVPP--   66 (116)
T ss_dssp             CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEE------TTEECB-------SSGGGSCTTCCEEEECSCH--
T ss_pred             cEEEEEcccCCCCCcHHHHHHHHHHCCCEEEEEccccccc------cCcccc-------ccchhccccceEEEEEeCH--
Confidence            689999988   7899999999999999999886543221      122211       2233344467988877543  


Q ss_pred             CcchhhhhhhHHHHHHHHHHHHcCCCEEEEEec
Q 023205          134 SNSYMYKINGTANINAIRAASEKGVKRFVYISA  166 (286)
Q Consensus       134 ~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss  166 (286)
                                .....+++.|.+.|++.+++-+.
T Consensus        67 ----------~~~~~~l~~~~~~g~k~v~~~~g   89 (116)
T d1y81a1          67 ----------KVGLQVAKEAVEAGFKKLWFQPG   89 (116)
T ss_dssp             ----------HHHHHHHHHHHHTTCCEEEECTT
T ss_pred             ----------HHHHHHHHHHHhcCCceEEeccc
Confidence                      34456788888899987665433

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=96.83  E-value=0.00017  Score=52.63  Aligned_cols=66  Identities=18%  Similarity=0.100  Sum_probs=46.8

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccc
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVG  130 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~  130 (286)
                      |+|.+.|+ |.+|+++++.|++.|++|++.+|+.++.......-++.+       ..+.+++++++|+||.+.-
T Consensus         1 MkIg~IG~-G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~g~~~-------~~~~~~~~~~~dvIilavk   66 (152)
T d2ahra2           1 MKIGIIGV-GKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPY-------AMSHQDLIDQVDLVILGIK   66 (152)
T ss_dssp             CEEEEECC-SHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHTCCB-------CSSHHHHHHTCSEEEECSC
T ss_pred             CEEEEEec-cHHHHHHHHHHHhCCCeEEEEcChHHhHHhhccccceee-------echhhhhhhccceeeeecc
Confidence            57999985 999999999999999999999998654221100002211       1235667789999998864

>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PH1109
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=96.73  E-value=0.0037  Score=44.34  Aligned_cols=86  Identities=15%  Similarity=0.111  Sum_probs=58.9

Q ss_pred             CCeEEEEcCC---ChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccccC
Q 023205           56 SEKLLVLGGN---GFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGF  132 (286)
Q Consensus        56 ~~~VlVtGat---G~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~~  132 (286)
                      .++|.|.|++   +..|..+++.|.+.||+|+.+......-      .+...       ..++.++-..+|.++-+..+ 
T Consensus        19 ~ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVnP~~~~i------~G~~~-------~~sl~dlp~~iD~v~i~vp~-   84 (139)
T d2d59a1          19 YKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKYEEV------LGRKC-------YPSVLDIPDKIEVVDLFVKP-   84 (139)
T ss_dssp             CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEE------TTEEC-------BSSGGGCSSCCSEEEECSCH-
T ss_pred             CCeEEEEeecCCCCCchHHHHHHHHHCCCEEEEECCccccc------CCCcc-------cccccccCccceEEEEEeCH-
Confidence            4689999998   8899999999999999999887553221      11111       12233334468988887543 


Q ss_pred             CCcchhhhhhhHHHHHHHHHHHHcCCCEEEEEec
Q 023205          133 GSNSYMYKINGTANINAIRAASEKGVKRFVYISA  166 (286)
Q Consensus       133 ~~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss  166 (286)
                                 .....+++.|.+.|++.+++-++
T Consensus        85 -----------~~~~~~~~e~~~~g~k~v~~~~G  107 (139)
T d2d59a1          85 -----------KLTMEYVEQAIKKGAKVVWFQYN  107 (139)
T ss_dssp             -----------HHHHHHHHHHHHHTCSEEEECTT
T ss_pred             -----------HHHHHHHHHHHHhCCCEEEEecc
Confidence                       34456788888889986665444

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=96.70  E-value=0.0024  Score=46.89  Aligned_cols=96  Identities=21%  Similarity=0.208  Sum_probs=58.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc-cccCCceeEEeccC--CCHhHHHHHh-----cCCCEEEE
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-DSWANNVIWHQGNL--LSSDSWKEAL-----DGVTAVIS  127 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~-~~~~~~~~~i~~Dl--~d~~~~~~~~-----~~~d~vi~  127 (286)
                      ..+|+|+| +|.+|...++.+...|.+|+++++++.+... +....... +..|-  .+...+.+.+     .++|+||.
T Consensus        27 g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~~~ga~~~-~~~~~~~~~~~~~~~~~~~~~g~g~D~vid  104 (170)
T d1e3ja2          27 GTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNCGADVT-LVVDPAKEEESSIIERIRSAIGDLPNVTID  104 (170)
T ss_dssp             TCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEE-EECCTTTSCHHHHHHHHHHHSSSCCSEEEE
T ss_pred             CCEEEEEc-ccccchhhHhhHhhhcccccccchHHHHHHHHHHcCCcEE-EeccccccccchhhhhhhcccccCCceeee
Confidence            45899998 6999999999998899999999998765321 11111222 22222  2333333333     35899999


Q ss_pred             ccccCCCcchhhhhhhHHHHHHHHHHHHcCCCEEEEEec
Q 023205          128 CVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISA  166 (286)
Q Consensus       128 ~a~~~~~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss  166 (286)
                      ++|..           ......++.++..|  ++++++.
T Consensus       105 ~~g~~-----------~~~~~a~~~~~~~G--~iv~~G~  130 (170)
T d1e3ja2         105 CSGNE-----------KCITIGINITRTGG--TLMLVGM  130 (170)
T ss_dssp             CSCCH-----------HHHHHHHHHSCTTC--EEEECSC
T ss_pred             cCCCh-----------HHHHHHHHHHhcCC--ceEEEec
Confidence            98752           01112344444444  7887764

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=96.66  E-value=0.00078  Score=50.13  Aligned_cols=71  Identities=15%  Similarity=0.135  Sum_probs=51.2

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCccccc--ccCCceeEEeccCCCHhHHHHHhcCCCEEEEccc
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRD--SWANNVIWHQGNLLSSDSWKEALDGVTAVISCVG  130 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~--~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~  130 (286)
                      .+|.|.|- |.+|..+++.|++.||+|++.+|++++....  .........  -....+++.+.+..+|.++.+..
T Consensus         3 ~nIg~IGl-G~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~--~a~~~~~~~~~~~~~~~ii~~~~   75 (176)
T d2pgda2           3 ADIALIGL-AVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVL--GAHSLEEMVSKLKKPRRIILLVK   75 (176)
T ss_dssp             BSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCE--ECSSHHHHHHHBCSSCEEEECSC
T ss_pred             CcEEEEeE-hHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHhcccccccc--chhhhhhhhhhhcccceEEEecC
Confidence            57999995 9999999999999999999999998663221  101111111  12356778888889999998853

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.65  E-value=0.0032  Score=46.30  Aligned_cols=75  Identities=20%  Similarity=0.136  Sum_probs=49.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHh-----cCCCEEEEcc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEAL-----DGVTAVISCV  129 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~-----~~~d~vi~~a  129 (286)
                      ..+|+|.|+ |.+|...+..+...|. +|++.++++++........--.++..+-.+.....+.+     .++|+||.+.
T Consensus        27 gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~~~Ga~~~~~~~~~~~~~~~~~~~~~~g~g~Dvvid~~  105 (171)
T d1pl8a2          27 GHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGQLGCKPEVTIECT  105 (171)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEECSSCCHHHHHHHHHHHHTSCCSEEEECS
T ss_pred             CCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHHHHHHHhCCcccccccccccccccccccccCCCCceEEEecc
Confidence            458999987 9999999999999997 79999988665321111111123333334444444433     3689999998


Q ss_pred             cc
Q 023205          130 GG  131 (286)
Q Consensus       130 ~~  131 (286)
                      |.
T Consensus       106 G~  107 (171)
T d1pl8a2         106 GA  107 (171)
T ss_dssp             CC
T ss_pred             CC
Confidence            75

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=96.63  E-value=0.00049  Score=49.95  Aligned_cols=65  Identities=18%  Similarity=0.213  Sum_probs=44.8

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCC-CeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccc
Q 023205           57 EKLLVLGGNGFVGSHICREALDRG-LTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVG  130 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g-~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~  130 (286)
                      |+|.+.|+ |.+|.++++.|++.| ++|++.+|++++........+++.. .|.   +    .+.++|+||.+.-
T Consensus         1 MkI~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~~~~~~~-~~~---~----~v~~~Div~lavk   66 (152)
T d1yqga2           1 MNVYFLGG-GNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKELGVETS-ATL---P----ELHSDDVLILAVK   66 (152)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHTCCEEE-SSC---C----CCCTTSEEEECSC
T ss_pred             CEEEEEcC-cHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhhcccccc-ccc---c----cccccceEEEecC
Confidence            58999996 999999999999887 8999999987653221111234332 121   1    2467899998853

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.60  E-value=0.00043  Score=52.16  Aligned_cols=74  Identities=20%  Similarity=0.158  Sum_probs=44.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEE-ecCCCccccccc-CCceeEEeccCCCH---hHHHHHh-cCCCEEEEcc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASL-SRSGRSSLRDSW-ANNVIWHQGNLLSS---DSWKEAL-DGVTAVISCV  129 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l-~R~~~~~~~~~~-~~~~~~i~~Dl~d~---~~~~~~~-~~~d~vi~~a  129 (286)
                      ..+|||+||+|.+|...++.....|.++++. +++.++...... ...-.++  |..++   +.+.+.. +++|+||.+.
T Consensus        31 ~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~gad~vi--~~~~~~~~~~~~~~~~~GvDvv~D~v  108 (187)
T d1vj1a2          31 NQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGFDAAV--NYKTGNVAEQLREACPGGVDVYFDNV  108 (187)
T ss_dssp             CCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHSCCSEEE--ETTSSCHHHHHHHHCTTCEEEEEESS
T ss_pred             CCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcccceEEe--eccchhHHHHHHHHhccCceEEEecC
Confidence            3689999999999999999988889765544 444333211111 1112233  33332   2233322 3699999997


Q ss_pred             cc
Q 023205          130 GG  131 (286)
Q Consensus       130 ~~  131 (286)
                      |.
T Consensus       109 Gg  110 (187)
T d1vj1a2         109 GG  110 (187)
T ss_dssp             CH
T ss_pred             Cc
Confidence            64

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=96.58  E-value=0.0011  Score=48.76  Aligned_cols=70  Identities=13%  Similarity=0.094  Sum_probs=43.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC--eEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEcccc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGL--TVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG  131 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~--~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~  131 (286)
                      |++|+|.|. |.+|..+++.|.+.|+  +|++.+|+++..........+....-+.   +  ......+|.||.+..+
T Consensus         1 Mk~I~IIG~-G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~~~~~~~~~~~~---~--~~~~~~~dlIila~p~   72 (171)
T d2g5ca2           1 MQNVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSI---A--KVEDFSPDFVMLSSPV   72 (171)
T ss_dssp             CCEEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCG---G--GGGGTCCSEEEECSCH
T ss_pred             CCEEEEEcc-CHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHHhhcchhhhhhh---h--hhhccccccccccCCc
Confidence            568999985 9999999999999985  7888888754421111111111111111   1  1223468999988654

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=96.52  E-value=0.0026  Score=47.34  Aligned_cols=74  Identities=14%  Similarity=0.127  Sum_probs=46.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCCCcccc-cccCCceeEEeccCCCHhHH----HHHh--cCCCEEEE
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSLR-DSWANNVIWHQGNLLSSDSW----KEAL--DGVTAVIS  127 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~~-~~~~~~~~~i~~Dl~d~~~~----~~~~--~~~d~vi~  127 (286)
                      ..+|+|+|+ |.+|...++.+...|. +|+++++++++... +... .-.++...-.+..+.    .+..  .++|+||.
T Consensus        29 G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a~~lG-a~~vi~~~~~~~~~~~~~i~~~~~~~g~Dvvid  106 (182)
T d1vj0a2          29 GKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIG-ADLTLNRRETSVEERRKAIMDITHGRGADFILE  106 (182)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTT-CSEEEETTTSCHHHHHHHHHHHTTTSCEEEEEE
T ss_pred             CCEEEEECC-Cccchhheeccccccccccccccccccccccccccc-ceEEEeccccchHHHHHHHHHhhCCCCceEEee
Confidence            468999997 9999999999999997 79999988665211 1111 112332221222222    2222  25899999


Q ss_pred             cccc
Q 023205          128 CVGG  131 (286)
Q Consensus       128 ~a~~  131 (286)
                      +.|.
T Consensus       107 ~vG~  110 (182)
T d1vj0a2         107 ATGD  110 (182)
T ss_dssp             CSSC
T ss_pred             cCCc
Confidence            9765

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.38  E-value=0.016  Score=40.71  Aligned_cols=73  Identities=19%  Similarity=0.231  Sum_probs=48.6

Q ss_pred             eEEEEcCCChhHHHHHHHHHHC-CCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccccCCCcc
Q 023205           58 KLLVLGGNGFVGSHICREALDR-GLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFGSNS  136 (286)
Q Consensus        58 ~VlVtGatG~iG~~l~~~Ll~~-g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~~~~~~  136 (286)
                      ||.|.|++|.+|+.+++.+.+. ++++.+..-..+                   +.+.  ....++|+||.+..|     
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~-------------------~~~~--~~~~~~DvvIDFS~p-----   54 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGD-------------------PLSL--LTDGNTEVVIDFTHP-----   54 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTC-------------------CTHH--HHTTTCSEEEECCCT-----
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCC-------------------chhh--hccccCCEEEEcccH-----
Confidence            6999999999999999998876 467665431110                   0011  122568999988544     


Q ss_pred             hhhhhhhHHHHHHHHHHHHcCCCEEEEE
Q 023205          137 YMYKINGTANINAIRAASEKGVKRFVYI  164 (286)
Q Consensus       137 ~~~~~~~~~~~~l~~~a~~~~v~~~v~~  164 (286)
                             ..+...++.|.+.+++ +|.-
T Consensus        55 -------~~~~~~~~~~~~~~~~-~ViG   74 (135)
T d1yl7a1          55 -------DVVMGNLEFLIDNGIH-AVVG   74 (135)
T ss_dssp             -------TTHHHHHHHHHHTTCE-EEEC
T ss_pred             -------HHHHHHHHHHHhcCCC-EEEe
Confidence                   2345678899899874 4433

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=96.31  E-value=0.00096  Score=48.78  Aligned_cols=73  Identities=21%  Similarity=0.234  Sum_probs=56.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCccc--ccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccccC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSL--RDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGF  132 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~--~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~~  132 (286)
                      +.+|+|.|+ |-.|..-++.....|.+|.+++.+.+...  +......++..   ..+.+.+++.++++|+||-++-..
T Consensus        32 pa~V~ViGa-GvaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~~~~~~~---~~~~~~l~~~~~~aDivI~aalip  106 (168)
T d1pjca1          32 PGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVELL---YSNSAEIETAVAEADLLIGAVLVP  106 (168)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSEEE---ECCHHHHHHHHHTCSEEEECCCCT
T ss_pred             CcEEEEECC-ChHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhcccceee---hhhhhhHHHhhccCcEEEEeeecC
Confidence            468999997 99999999999999999999999865531  11222344444   446788999999999999998544

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=96.31  E-value=0.0026  Score=48.05  Aligned_cols=66  Identities=15%  Similarity=0.127  Sum_probs=49.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccccCC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFG  133 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~~~  133 (286)
                      .++|.|.|- |.||+.+++.|..-|.+|++.++..+.....           +....++++++++.+|+|+.+.....
T Consensus        43 gk~vgIiG~-G~IG~~va~~l~~fg~~V~~~d~~~~~~~~~-----------~~~~~~~l~~~l~~sDii~~~~plt~  108 (197)
T d1j4aa1          43 DQVVGVVGT-GHIGQVFMQIMEGFGAKVITYDIFRNPELEK-----------KGYYVDSLDDLYKQADVISLHVPDVP  108 (197)
T ss_dssp             GSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCHHHHH-----------TTCBCSCHHHHHHHCSEEEECSCCCG
T ss_pred             CCeEEEecc-cccchhHHHhHhhhcccccccCccccccccc-----------ceeeeccccccccccccccccCCccc
Confidence            579999995 9999999999999999999998765432111           11123457888999999988876543

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.26  E-value=0.0048  Score=42.26  Aligned_cols=35  Identities=29%  Similarity=0.591  Sum_probs=32.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGR   91 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~   91 (286)
                      +++|+|.|| |++|..++..|.+.|.+|+++.|.+.
T Consensus        22 p~~v~IiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~   56 (117)
T d1ebda2          22 PKSLVVIGG-GYIGIELGTAYANFGTKVTILEGAGE   56 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CCeEEEECC-CccceeeeeeecccccEEEEEEecce
Confidence            478999997 99999999999999999999998864

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=96.19  E-value=0.0036  Score=47.11  Aligned_cols=72  Identities=19%  Similarity=0.138  Sum_probs=51.9

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccccCC
Q 023205           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFG  133 (286)
Q Consensus        54 ~~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~~~  133 (286)
                      ...++|.|.|. |.||+.+++.|..-|.+|++.++..........         ++...++++++++.+|+|+.+.....
T Consensus        47 L~gktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~---------~~~~~~~l~~ll~~sD~i~~~~plt~  116 (193)
T d1mx3a1          47 IRGETLGIIGL-GRVGQAVALRAKAFGFNVLFYDPYLSDGVERAL---------GLQRVSTLQDLLFHSDCVTLHCGLNE  116 (193)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSCTTHHHHH---------TCEECSSHHHHHHHCSEEEECCCCCT
T ss_pred             eeCceEEEecc-ccccccceeeeeccccceeeccCcccccchhhh---------ccccccchhhccccCCEEEEeecccc
Confidence            34679999995 999999999999999999999987554221110         11123457788999999988876544


Q ss_pred             Cc
Q 023205          134 SN  135 (286)
Q Consensus       134 ~~  135 (286)
                      ..
T Consensus       117 ~T  118 (193)
T d1mx3a1         117 HN  118 (193)
T ss_dssp             TC
T ss_pred             cc
Confidence            33

>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain
species: Escherichia coli [TaxId: 562]

Probab=96.17  E-value=0.0033  Score=39.64  Aligned_cols=36  Identities=19%  Similarity=0.333  Sum_probs=32.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRS   92 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~   92 (286)
                      +|+|.|.|+ |++|+-++..-.+-|++|++++-+++.
T Consensus         1 ~k~vgIlG~-GQLgrMl~~Aa~~LG~~v~vldp~~~~   36 (78)
T d3etja2           1 MKQVCVLGN-GQLGRMLRQAGEPLGIAVWPVGLDAEP   36 (78)
T ss_dssp             CEEEEEEBC-SHHHHHHHHHHGGGTEEEEEECTTSCG
T ss_pred             CCEEEEEcC-CHHHHHHHHHHHHcCCEEEEEcCCCCC
Confidence            478999996 999999999999999999999977654

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=96.09  E-value=0.0058  Score=42.19  Aligned_cols=35  Identities=29%  Similarity=0.588  Sum_probs=32.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGR   91 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~   91 (286)
                      .++|+|.|| |++|..++..|.+.|.+|+++.|.+.
T Consensus        30 ~~~vvIIGg-G~iG~E~A~~l~~~g~~Vtli~~~~~   64 (121)
T d1d7ya2          30 QSRLLIVGG-GVIGLELAATARTAGVHVSLVETQPR   64 (121)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CCeEEEECc-chhHHHHHHHhhcccceEEEEeeccc
Confidence            468999997 99999999999999999999999864

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=96.04  E-value=0.0061  Score=44.63  Aligned_cols=75  Identities=17%  Similarity=0.166  Sum_probs=47.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCCCcccc-cccCCceeEEeccCCCH-hHHHHHh--cCCCEEEEccc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSLR-DSWANNVIWHQGNLLSS-DSWKEAL--DGVTAVISCVG  130 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~~-~~~~~~~~~i~~Dl~d~-~~~~~~~--~~~d~vi~~a~  130 (286)
                      ..+|+|+|++|.+|...+..+...|. +|++.++++++... +.... -.++..+-.|. +.+.+..  +++|+||.+++
T Consensus        28 g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~~~Ga-~~~i~~~~~~~~~~~~~~~~~~~~d~vid~~g  106 (170)
T d1jvba2          28 TKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGA-DYVINASMQDPLAEIRRITESKGVDAVIDLNN  106 (170)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTC-SEEEETTTSCHHHHHHHHTTTSCEEEEEESCC
T ss_pred             CCEEEEEeccccceeeeeecccccccccccccccchhhHHHHHHcCC-ceeeccCCcCHHHHHHHHhhcccchhhhcccc
Confidence            46899999999999999999988884 88888887654211 11111 13333222222 2222222  35899999976


Q ss_pred             c
Q 023205          131 G  131 (286)
Q Consensus       131 ~  131 (286)
                      .
T Consensus       107 ~  107 (170)
T d1jvba2         107 S  107 (170)
T ss_dssp             C
T ss_pred             c
Confidence            5

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=96.03  E-value=0.0022  Score=47.15  Aligned_cols=36  Identities=17%  Similarity=0.335  Sum_probs=31.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCCCc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRS   92 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~-~V~~l~R~~~~   92 (286)
                      .++|+|.|+ |..|++++..|.+.|. +|.++.|+.++
T Consensus        17 ~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~k   53 (167)
T d1npya1          17 NAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKT   53 (167)
T ss_dssp             TSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHH
T ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHHH
Confidence            468999997 9999999999999995 89999998765

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=96.01  E-value=0.0095  Score=44.50  Aligned_cols=69  Identities=19%  Similarity=0.183  Sum_probs=51.1

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccccCCC
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFGS  134 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~~~~  134 (286)
                      ..++|.|.| .|.||+.+++.|..-|.+|+..++........     .  .     ..++++++++.+|+|+.++.....
T Consensus        43 ~~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~-----~--~-----~~~~l~ell~~sDii~i~~plt~~  109 (188)
T d1sc6a1          43 RGKKLGIIG-YGHIGTQLGILAESLGMYVYFYDIENKLPLGN-----A--T-----QVQHLSDLLNMSDVVSLHVPENPS  109 (188)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCCCCTT-----C--E-----ECSCHHHHHHHCSEEEECCCSSTT
T ss_pred             cceEEEEee-cccchhhhhhhcccccceEeeccccccchhhh-----h--h-----hhhhHHHHHhhccceeecccCCcc
Confidence            357899998 59999999999999999999999875432111     0  1     113577889999999888766544


Q ss_pred             cc
Q 023205          135 NS  136 (286)
Q Consensus       135 ~~  136 (286)
                      ..
T Consensus       110 T~  111 (188)
T d1sc6a1         110 TK  111 (188)
T ss_dssp             TT
T ss_pred             hh
Confidence            43

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=95.99  E-value=0.0086  Score=45.19  Aligned_cols=66  Identities=14%  Similarity=0.111  Sum_probs=49.6

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccccCC
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFG  133 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~~~  133 (286)
                      ..++|.|.|. |.||+.+++.|..-|.+|++.++.......    ..+        +..+++++++.+|+|+.+.....
T Consensus        44 ~~ktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~----~~~--------~~~~l~~l~~~~D~v~~~~plt~  109 (199)
T d1dxya1          44 GQQTVGVMGT-GHIGQVAIKLFKGFGAKVIAYDPYPMKGDH----PDF--------DYVSLEDLFKQSDVIDLHVPGIE  109 (199)
T ss_dssp             GGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSSCC----TTC--------EECCHHHHHHHCSEEEECCCCCG
T ss_pred             cceeeeeeec-ccccccccccccccceeeeccCCccchhhh----cch--------hHHHHHHHHHhcccceeeecccc
Confidence            3579999995 999999999999999999999987554211    111        12347788889999988776543

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=95.97  E-value=0.0035  Score=46.48  Aligned_cols=36  Identities=25%  Similarity=0.315  Sum_probs=33.4

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCc
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRS   92 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~   92 (286)
                      .+|||+||+|.+|...++.....|.+|++++|++++
T Consensus        33 ~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k   68 (177)
T d1o89a2          33 GEIVVTGASGGVGSTAVALLHKLGYQVVAVSGREST   68 (177)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGG
T ss_pred             CcEEEEEccccchHHHHHHHHHcCCCeEEEecchhH
Confidence            479999999999999999999999999999998766

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=95.96  E-value=0.0081  Score=41.51  Aligned_cols=35  Identities=20%  Similarity=0.432  Sum_probs=31.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGR   91 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~   91 (286)
                      .++|+|.|| |++|..++..|.+.|.+|+++.|.+.
T Consensus        30 ~k~vvViGg-G~iG~E~A~~l~~~g~~Vtlie~~~~   64 (123)
T d1nhpa2          30 VNNVVVIGS-GYIGIEAAEAFAKAGKKVTVIDILDR   64 (123)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CCEEEEECC-hHHHHHHHHHhhccceEEEEEEecCc
Confidence            568999996 99999999999999999999988753

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=95.94  E-value=0.0057  Score=41.95  Aligned_cols=35  Identities=20%  Similarity=0.420  Sum_probs=31.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGR   91 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~   91 (286)
                      +++|+|.|| |++|..++..|.+.|.+|+++.|...
T Consensus        22 p~~v~IiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~~   56 (117)
T d1onfa2          22 SKKIGIVGS-GYIAVELINVIKRLGIDSYIFARGNR   56 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSSS
T ss_pred             CCEEEEECC-chHHHHHHHHHHhccccceeeehhcc
Confidence            478999997 99999999999999999999998753

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.92  E-value=0.0076  Score=41.59  Aligned_cols=36  Identities=19%  Similarity=0.353  Sum_probs=32.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRS   92 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~   92 (286)
                      +++++|.|| |++|..++..|.+.|.+|+++.|.+.-
T Consensus        23 p~~~vIiG~-G~ig~E~A~~l~~lG~~Vtii~~~~~~   58 (122)
T d1v59a2          23 PKRLTIIGG-GIIGLEMGSVYSRLGSKVTVVEFQPQI   58 (122)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred             CCeEEEECC-CchHHHHHHHHHhhCcceeEEEecccc
Confidence            579999997 999999999999999999999987643

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=95.90  E-value=0.012  Score=42.66  Aligned_cols=36  Identities=22%  Similarity=0.227  Sum_probs=31.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRS   92 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~   92 (286)
                      ..+|+|.|+ |.+|...++.+...|.+|+++++++++
T Consensus        28 g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~   63 (166)
T d1llua2          28 GQWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDAK   63 (166)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHH
T ss_pred             CCEEEEeec-cccHHHHHHHHHHcCCccceecchhhH
Confidence            568999986 999999999888889999999988655

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=95.88  E-value=0.0072  Score=44.43  Aligned_cols=69  Identities=16%  Similarity=0.224  Sum_probs=47.9

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccc--ccc--CCceeEEeccCCCHhHHHHHhcCCCEEEEccc
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSW--ANNVIWHQGNLLSSDSWKEALDGVTAVISCVG  130 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~--~~~--~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~  130 (286)
                      ..++|+|.|+ |..++.++..|.+.+.+|+++.|+.++...  +..  ..++.....|-.       .+..+|+||++.+
T Consensus        17 ~~k~vlIlGa-GGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~~~~~~~~~~~~-------~~~~~diiIN~tp   88 (171)
T d1p77a1          17 PNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQAVSMDSI-------PLQTYDLVINATS   88 (171)
T ss_dssp             TTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGGC-------CCSCCSEEEECCC
T ss_pred             CCCEEEEECC-cHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhccccchhhhccc-------cccccceeeeccc
Confidence            3678999996 888999999999988899999999755221  111  123344433321       2467899999976


Q ss_pred             c
Q 023205          131 G  131 (286)
Q Consensus       131 ~  131 (286)
                      .
T Consensus        89 ~   89 (171)
T d1p77a1          89 A   89 (171)
T ss_dssp             C
T ss_pred             c
Confidence            4

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=95.82  E-value=0.0092  Score=40.93  Aligned_cols=35  Identities=26%  Similarity=0.336  Sum_probs=32.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGR   91 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~   91 (286)
                      +++++|.|| |+||..++..|.+.|.+|+++.|...
T Consensus        22 p~~i~IiG~-G~ig~E~A~~l~~~G~~Vtiv~~~~~   56 (119)
T d3lada2          22 PGKLGVIGA-GVIGLELGSVWARLGAEVTVLEAMDK   56 (119)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CCeEEEECC-ChHHHHHHHHHHHcCCceEEEEeecc
Confidence            578999997 99999999999999999999998854

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=95.80  E-value=0.008  Score=41.04  Aligned_cols=35  Identities=17%  Similarity=0.308  Sum_probs=31.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGR   91 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~   91 (286)
                      +++|+|.|| |++|..++..|.+.|.+|+++.|.+.
T Consensus        21 p~~vvIiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~   55 (116)
T d1gesa2          21 PERVAVVGA-GYIGVELGGVINGLGAKTHLFEMFDA   55 (116)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCEEEEECC-ChhhHHHHHHhhccccEEEEEeecch
Confidence            468999997 99999999999999999999999754

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.70  E-value=0.039  Score=40.13  Aligned_cols=58  Identities=16%  Similarity=0.165  Sum_probs=45.3

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccccCC
Q 023205           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFG  133 (286)
Q Consensus        54 ~~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~~~  133 (286)
                      ...++|+|.|.+.-+|+.++..|+++|..|.........                      +.+..+++|++|.++|..+
T Consensus        37 l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~~----------------------l~~~~~~aDivi~a~G~~~   94 (170)
T d1a4ia1          37 IAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAH----------------------LDEEVNKGDILVVATGQPE   94 (170)
T ss_dssp             CTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSS----------------------HHHHHTTCSEEEECCCCTT
T ss_pred             cccceEEEEecCCccchHHHHHHHhccCceEEEeccccc----------------------HHHHHhhccchhhcccccc
Confidence            347899999999999999999999999999987765332                      3345567788887776543

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=95.70  E-value=0.017  Score=41.94  Aligned_cols=56  Identities=21%  Similarity=0.288  Sum_probs=44.1

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccccC
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGF  132 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~~  132 (286)
                      ..++|+|.|.+.-+|+.++..|.++|..|+.......                      .+.+..+.+|+||.++|..
T Consensus        36 ~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t~----------------------~l~~~~~~ADivI~a~G~p   91 (166)
T d1b0aa1          36 FGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTK----------------------NLRHHVENADLLIVAVGKP   91 (166)
T ss_dssp             TTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCS----------------------CHHHHHHHCSEEEECSCCT
T ss_pred             ccceEEEEeccccccHHHHHHHHHhhccccccccccc----------------------hhHHHHhhhhHhhhhccCc
Confidence            4789999999999999999999999999987754422                      1344556788888887754

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=95.70  E-value=0.0091  Score=41.19  Aligned_cols=33  Identities=30%  Similarity=0.381  Sum_probs=30.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRS   89 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~   89 (286)
                      +++++|.|| |+||..++..|.+.|.+|+++.|+
T Consensus        20 P~~vvIIGg-G~iG~E~A~~l~~lG~~Vtii~~~   52 (122)
T d1h6va2          20 PGKTLVVGA-SYVALECAGFLAGIGLDVTVMVRS   52 (122)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             CCeEEEECC-CccHHHHHHHHhhcCCeEEEEEec
Confidence            468999997 999999999999999999999876

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=95.69  E-value=0.008  Score=40.94  Aligned_cols=35  Identities=26%  Similarity=0.505  Sum_probs=31.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGR   91 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~   91 (286)
                      +++++|.|| |++|..++..|.+.|.+|+++.|.+.
T Consensus        21 p~~vvIiGg-G~~G~E~A~~l~~~g~~Vtlve~~~~   55 (115)
T d1lvla2          21 PQHLVVVGG-GYIGLELGIAYRKLGAQVSVVEARER   55 (115)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CCeEEEECC-CHHHHHHHHHHhhcccceEEEeeecc
Confidence            468999997 99999999999999999999998753

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=95.69  E-value=0.011  Score=43.68  Aligned_cols=75  Identities=13%  Similarity=0.034  Sum_probs=51.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccC----------------------CCHh
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNL----------------------LSSD  113 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl----------------------~d~~  113 (286)
                      +-+|+|.|| |-.|..-++....-|.+|.+++.+...... ...-.-+++..+.                      ...+
T Consensus        29 pa~VvViGa-GvaG~~Aa~~A~~lGA~V~v~D~~~~~~~~-l~~l~~~~i~~~~~~~~~~~~~~gyA~~~s~~~~~~~~~  106 (183)
T d1l7da1          29 PARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQ-VESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAE  106 (183)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHH-HHHTTCEECCC-----------------------CCHHH
T ss_pred             CcEEEEEcC-cHHHHHHHHHHHHcCCEEEEEeccHHHHHH-HHHhhcceEEEeccccccccccccchhhcCHHHHHHHHH
Confidence            458999997 999999999999999999999998765321 1111112221111                      1235


Q ss_pred             HHHHHhcCCCEEEEccccC
Q 023205          114 SWKEALDGVTAVISCVGGF  132 (286)
Q Consensus       114 ~~~~~~~~~d~vi~~a~~~  132 (286)
                      .+.+.+.++|+||-.+-..
T Consensus       107 ~l~~~l~~aDlVI~talip  125 (183)
T d1l7da1         107 AVLKELVKTDIAITTALIP  125 (183)
T ss_dssp             HHHHHHTTCSEEEECCCCT
T ss_pred             HHHHHHHhhhhheeeeecC
Confidence            5677788999999887543

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.67  E-value=0.0094  Score=41.27  Aligned_cols=35  Identities=11%  Similarity=0.326  Sum_probs=32.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGR   91 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~   91 (286)
                      +++|+|.|| |++|..++..|.+.|.+|+++.|...
T Consensus        22 pk~vvIvGg-G~iG~E~A~~l~~~G~~Vtlv~~~~~   56 (125)
T d3grsa2          22 PGRSVIVGA-GYIAVEMAGILSALGSKTSLMIRHDK   56 (125)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCEEEEEcC-CccHHHHHHHHhcCCcEEEEEeeccc
Confidence            478999997 99999999999999999999999753

>d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=95.67  E-value=0.01  Score=43.79  Aligned_cols=97  Identities=5%  Similarity=0.094  Sum_probs=55.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCC-CeEEEEecCCCccccc---ccCCce--------eEEeccCCCHhHHHHHhcCCC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRG-LTVASLSRSGRSSLRD---SWANNV--------IWHQGNLLSSDSWKEALDGVT  123 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g-~~V~~l~R~~~~~~~~---~~~~~~--------~~i~~Dl~d~~~~~~~~~~~d  123 (286)
                      |-||.|-| .|.||+.+++.|.+++ .+|+++....+.....   .....+        .+-...+.-...+..++.++|
T Consensus         1 MIKVaING-fGRIGR~v~Ral~~~~dievVaInd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~g~~~~~~~~vD   79 (178)
T d1b7go1           1 MVNVAVNG-YGTIGKRVADAIIKQPDMKLVGVAKTSPNYEAFIAHRRGIRIYVPQQSIKKFEESGIPVAGTVEDLIKTSD   79 (178)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHHTCTTEEEEEEECSSCSHHHHHHHHTTCCEECCGGGHHHHHTTTCCCCCCHHHHHHHCS
T ss_pred             CeEEEEEC-CCHHHHHHHHHHHhCCCCEEEEEECCCCcHHHHHhcccCcceeccCccceeccccceecCCchhhhhhcCC
Confidence            45899999 6999999999999875 6888876543321110   000000        000011111223455567899


Q ss_pred             EEEEccccCCCcchhhhhhhHHHHHHHHHHHHcCCCEEEEEec
Q 023205          124 AVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISA  166 (286)
Q Consensus       124 ~vi~~a~~~~~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss  166 (286)
                      +|+-|.|.+..            ..-++...+.| +++|+.++
T Consensus        80 iViecTG~f~~------------~e~a~~hl~~G-~KvIi~~~  109 (178)
T d1b7go1          80 IVVDTTPNGVG------------AQYKPIYLQLQ-RNAIFQGG  109 (178)
T ss_dssp             EEEECCSTTHH------------HHHHHHHHHTT-CEEEECTT
T ss_pred             EEEECCCCcCC------------HHHHHHHHHcC-CEEEEECC
Confidence            99999886411            12234444567 46776544

>d2dt5a2 c.2.1.12 (A:78-203) Transcriptional repressor Rex, C-terminal domain {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Transcriptional repressor Rex, C-terminal domain
domain: Transcriptional repressor Rex, C-terminal domain
species: Thermus aquaticus [TaxId: 271]

Probab=95.66  E-value=0.018  Score=39.93  Aligned_cols=92  Identities=12%  Similarity=0.094  Sum_probs=59.9

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHC-CCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhc-CCCEEEEccccCCC
Q 023205           57 EKLLVLGGNGFVGSHICREALDR-GLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD-GVTAVISCVGGFGS  134 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~-g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~-~~d~vi~~a~~~~~  134 (286)
                      .+|+|.|| |.+|+.+++++... +++++++.-+..+... ..-.++.++.     .+.+.+..+ .++.++.+...   
T Consensus         4 ~~v~I~Ga-G~~G~~l~~~l~~~~~~~iv~fiDdd~~k~G-~~I~Gi~V~~-----~~~l~~~~~~~i~iai~~i~~---   73 (126)
T d2dt5a2           4 WGLCIVGM-GRLGSALADYPGFGESFELRGFFDVDPEKVG-RPVRGGVIEH-----VDLLPQRVPGRIEIALLTVPR---   73 (126)
T ss_dssp             EEEEEECC-SHHHHHHHHCSCCCSSEEEEEEEESCTTTTT-CEETTEEEEE-----GGGHHHHSTTTCCEEEECSCH---
T ss_pred             ceEEEEcC-CHHHHHHHHhHhhcCCcEEEEEEeCchHhcC-CEECCEEEec-----HHHHHHHHhhcccEEEEeCCH---
Confidence            47999997 99999999987543 6899988876544221 1123666653     334555554 35665555432   


Q ss_pred             cchhhhhhhHHHHHHHHHHHHcCCCEEEEEecC
Q 023205          135 NSYMYKINGTANINAIRAASEKGVKRFVYISAA  167 (286)
Q Consensus       135 ~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss~  167 (286)
                               .....+++.+.+.|++.+...+..
T Consensus        74 ---------~~~~~I~d~l~~~gIk~I~~f~~~   97 (126)
T d2dt5a2          74 ---------EAAQKAADLLVAAGIKGILNFAPV   97 (126)
T ss_dssp             ---------HHHHHHHHHHHHHTCCEEEECSSS
T ss_pred             ---------HHHHHHHHHHHHcCCCEEeecCce
Confidence                     233467888888899988877664

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=95.65  E-value=0.0041  Score=45.87  Aligned_cols=73  Identities=19%  Similarity=0.172  Sum_probs=43.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeE-EEEecCCCcccccccCCceeEEeccCCCHh---HHHHHhc-CCCEEEEccc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTV-ASLSRSGRSSLRDSWANNVIWHQGNLLSSD---SWKEALD-GVTAVISCVG  130 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V-~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~---~~~~~~~-~~d~vi~~a~  130 (286)
                      ..+|+|.|+ |.+|...+..+...|.++ ++.++++.+........-.+++  |..+.+   .+.+... ++|+||.|.|
T Consensus        29 g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~~~Ga~~~i--~~~~~~~~~~i~~~t~gg~D~vid~~G  105 (174)
T d1f8fa2          29 ASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVI--NSKTQDPVAAIKEITDGGVNFALESTG  105 (174)
T ss_dssp             TCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCSEEE--ETTTSCHHHHHHHHTTSCEEEEEECSC
T ss_pred             CCEEEEeCC-CHHHhhhhhcccccccceeeeeccHHHHHHHHHHcCCeEEE--eCCCcCHHHHHHHHcCCCCcEEEEcCC
Confidence            568999997 999999999888888755 4555554332111111112344  333332   2333322 5899999976


Q ss_pred             c
Q 023205          131 G  131 (286)
Q Consensus       131 ~  131 (286)
                      .
T Consensus       106 ~  106 (174)
T d1f8fa2         106 S  106 (174)
T ss_dssp             C
T ss_pred             c
Confidence            5

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=95.61  E-value=0.0035  Score=46.40  Aligned_cols=71  Identities=15%  Similarity=0.186  Sum_probs=46.4

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCccccc--cc-C-CceeEEeccCCCHhHHHHHhcCCCEEEEcc
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRD--SW-A-NNVIWHQGNLLSSDSWKEALDGVTAVISCV  129 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~--~~-~-~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a  129 (286)
                      |+|.|.| .|.+|..+++.|++.||+|.+.+|++++....  .. . ........ ..+.+.+...+...+.++-+.
T Consensus         2 MkIGvIG-lG~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~   76 (178)
T d1pgja2           2 MDVGVVG-LGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKANASAPFAGNLKA-FETMEAFAASLKKPRKALILV   76 (178)
T ss_dssp             BSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSTTGGGEEE-CSCHHHHHHHBCSSCEEEECC
T ss_pred             CEEEEEe-ehHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccccchhh-hhhhhHHHHhcccceEEEEee
Confidence            5799998 59999999999999999999999987653211  10 0 00111111 224455666666666666654

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.60  E-value=0.0084  Score=44.97  Aligned_cols=37  Identities=27%  Similarity=0.455  Sum_probs=33.4

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCc
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRS   92 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~   92 (286)
                      +-++|.|.|| |.+|+.++..++..|++|++.+++++.
T Consensus         3 ~IkkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~   39 (192)
T d1f0ya2           3 IVKHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDI   39 (192)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             eeEEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChHH
Confidence            3579999997 999999999999999999999998753

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=95.60  E-value=0.0078  Score=44.82  Aligned_cols=70  Identities=11%  Similarity=0.043  Sum_probs=50.5

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccccCCC
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFGS  134 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~~~~  134 (286)
                      ..+++.|.|. |.||+.+++.+..-|.+|++.+|...+.....  ..+        ...+++++++.+|+|+.+......
T Consensus        43 ~~k~vgiiG~-G~IG~~va~~~~~fg~~v~~~d~~~~~~~~~~--~~~--------~~~~l~ell~~sDiv~~~~Plt~~  111 (184)
T d1ygya1          43 FGKTVGVVGL-GRIGQLVAQRIAAFGAYVVAYDPYVSPARAAQ--LGI--------ELLSLDDLLARADFISVHLPKTPE  111 (184)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSCHHHHHH--HTC--------EECCHHHHHHHCSEEEECCCCSTT
T ss_pred             cceeeeeccc-cchhHHHHHHhhhccceEEeecCCCChhHHhh--cCc--------eeccHHHHHhhCCEEEEcCCCCch
Confidence            3678999995 99999999999988999999988765422111  011        123467889999999888766544


Q ss_pred             c
Q 023205          135 N  135 (286)
Q Consensus       135 ~  135 (286)
                      .
T Consensus       112 T  112 (184)
T d1ygya1         112 T  112 (184)
T ss_dssp             T
T ss_pred             h
Confidence            3

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=95.59  E-value=0.018  Score=42.95  Aligned_cols=71  Identities=14%  Similarity=0.068  Sum_probs=50.6

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccccCCC
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFGS  134 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~~~~  134 (286)
                      ..++|.|.|. |.||+.+++.+..-|.+|.+.++..........        ......++++++++.+|+|+.+......
T Consensus        46 ~g~tvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~--------~~~~~~~~l~~ll~~sD~v~l~~plt~~  116 (191)
T d1gdha1          46 DNKTLGIYGF-GSIGQALAKRAQGFDMDIDYFDTHRASSSDEAS--------YQATFHDSLDSLLSVSQFFSLNAPSTPE  116 (191)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSCCCHHHHHH--------HTCEECSSHHHHHHHCSEEEECCCCCTT
T ss_pred             cccceEEeec-ccchHHHHHHHHhhccccccccccccccchhhc--------ccccccCCHHHHHhhCCeEEecCCCCch
Confidence            3679999995 999999999999999999999886543211110        0011224578899999999877765443

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=95.58  E-value=0.0085  Score=41.29  Aligned_cols=34  Identities=24%  Similarity=0.582  Sum_probs=31.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCC
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGR   91 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~   91 (286)
                      ++|+|.|| |++|-.++..|.+.|.+|+++.|.+.
T Consensus        33 ~~vvIiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~~   66 (122)
T d1xhca2          33 GEAIIIGG-GFIGLELAGNLAEAGYHVKLIHRGAM   66 (122)
T ss_dssp             SEEEEEEC-SHHHHHHHHHHHHTTCEEEEECSSSC
T ss_pred             CcEEEECC-cHHHHHHHHHhhcccceEEEEecccc
Confidence            68999997 99999999999999999999998753

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.55  E-value=0.0059  Score=44.26  Aligned_cols=68  Identities=16%  Similarity=0.133  Sum_probs=51.5

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccccC
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGF  132 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~~  132 (286)
                      ..|+|+|.| .|.+|+.+++.|...|.+|++...++.+..+.. .++.++        ..+++++..+|+|+-+.|..
T Consensus        23 ~Gk~v~V~G-yG~iG~g~A~~~rg~G~~V~v~e~dp~~al~A~-~dG~~v--------~~~~~a~~~adivvtaTGn~   90 (163)
T d1li4a1          23 AGKVAVVAG-YGDVGKGCAQALRGFGARVIITEIDPINALQAA-MEGYEV--------TTMDEACQEGNIFVTTTGCI   90 (163)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTCEE--------CCHHHHTTTCSEEEECSSCS
T ss_pred             cCCEEEEec-cccccHHHHHHHHhCCCeeEeeecccchhHHhh-cCceEe--------eehhhhhhhccEEEecCCCc
Confidence            468999999 699999999999999999999999875533221 122222        23667888899999887753

>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=95.50  E-value=0.17  Score=34.19  Aligned_cols=90  Identities=20%  Similarity=0.229  Sum_probs=60.5

Q ss_pred             CCeEEEEcCCC----------hhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhc--CCC
Q 023205           56 SEKLLVLGGNG----------FVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD--GVT  123 (286)
Q Consensus        56 ~~~VlVtGatG----------~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~--~~d  123 (286)
                      .++|||.|+..          +.+.+.++.|.+.|++++.++-++..-...  .+-..-+..+....+.+.+.++  ..|
T Consensus         4 ~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~~~IliN~NPeTVstd--~d~aD~lYfeplt~e~v~~Ii~~E~p~   81 (121)
T d1a9xa4           4 REKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTD--YDTSDRLYFEPVTLEDVLEIVRIEKPK   81 (121)
T ss_dssp             SCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTCEEEEECCCTTSSTTS--TTSSSEEECCCCSHHHHHHHHHHHCCS
T ss_pred             CCEEEEECCCcCcccccchhhHHHHHHHHHHHhcCCeEEEEecChhhhhcC--hhhcCceEEccCCHHHHHHHHHHhCCC
Confidence            57899999843          789999999999999999999887653211  1122333445556777777664  688


Q ss_pred             EEEEccccCCCcchhhhhhhHHHHHHHHHHHHcCCC
Q 023205          124 AVISCVGGFGSNSYMYKINGTANINAIRAASEKGVK  159 (286)
Q Consensus       124 ~vi~~a~~~~~~~~~~~~~~~~~~~l~~~a~~~~v~  159 (286)
                      .|+-..|.            +-..|+.....+.|++
T Consensus        82 ~ii~~~GG------------Qtalnla~~L~~~gv~  105 (121)
T d1a9xa4          82 GVIVQYGG------------QTPLKLARALEAAGVP  105 (121)
T ss_dssp             EEECSSST------------HHHHTTHHHHHHTTCC
T ss_pred             EEEeehhh------------hhHHHHHHHHHHcCCc
Confidence            88766543            2233555556667764

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=95.46  E-value=0.013  Score=45.30  Aligned_cols=34  Identities=26%  Similarity=0.440  Sum_probs=31.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSG   90 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~   90 (286)
                      .++|+|.|| |..|..++..|.++|++|.++.|+.
T Consensus         6 ~~kVvVIGa-GiaGl~~A~~L~~~G~~V~vier~~   39 (268)
T d1c0pa1           6 QKRVVVLGS-GVIGLSSALILARKGYSVHILARDL   39 (268)
T ss_dssp             SCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CCcEEEECc-cHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            568999997 9999999999999999999999974

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=95.44  E-value=0.0079  Score=44.32  Aligned_cols=73  Identities=22%  Similarity=0.199  Sum_probs=47.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCCCcccccccCCceeEEeccCCC---HhHHHHHhc--CCCEEEEcc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSLRDSWANNVIWHQGNLLS---SDSWKEALD--GVTAVISCV  129 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d---~~~~~~~~~--~~d~vi~~a  129 (286)
                      ..+|+|.|+ |.+|...++.+...|. +|+++++++++........-.+++  |..+   .+.+.+...  ++|+||.++
T Consensus        28 g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~~lGa~~~i--~~~~~~~~~~v~~~t~g~G~D~vid~~  104 (174)
T d1jqba2          28 GSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDIL--NYKNGHIEDQVMKLTNGKGVDRVIMAG  104 (174)
T ss_dssp             TCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHHHHTCSEEE--CGGGSCHHHHHHHHTTTSCEEEEEECS
T ss_pred             CCEEEEEcC-CcchhhhhhhhhcccccccccccchhhhHHHHHhhCccccc--cccchhHHHHHHHHhhccCcceEEEcc
Confidence            558999986 9999999998888886 799998876542211111112233  3323   233444443  589999998


Q ss_pred             cc
Q 023205          130 GG  131 (286)
Q Consensus       130 ~~  131 (286)
                      |.
T Consensus       105 g~  106 (174)
T d1jqba2         105 GG  106 (174)
T ss_dssp             SC
T ss_pred             CC
Confidence            75

>d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Diaminopimelic acid dehydrogenase (DAPDH)
species: Corynebacterium glutamicum [TaxId: 1718]

Probab=95.40  E-value=0.032  Score=40.62  Aligned_cols=66  Identities=11%  Similarity=0.199  Sum_probs=41.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHC-CCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccccC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDR-GLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGF  132 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~-g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~~  132 (286)
                      +.+|.|.|. |.+|+..++.|.+. +.+++++.....+..     .......     ..+......++|+|+.+.++.
T Consensus         3 kirvgiiG~-G~ig~~~~~~l~~~~~~elvav~~~~~~~~-----~~~~~~~-----~~~~~~~~~~~D~Vvi~tp~~   69 (170)
T d1f06a1           3 NIRVAIVGY-GNLGRSVEKLIAKQPDMDLVGIFSRRATLD-----TKTPVFD-----VADVDKHADDVDVLFLCMGSA   69 (170)
T ss_dssp             CEEEEEECC-SHHHHHHHHHHTTCSSEEEEEEEESSSCCS-----SSSCEEE-----GGGGGGTTTTCSEEEECSCTT
T ss_pred             cceEEEECC-hHHHHHHHHHHHhCCCcEEEEEEecccccc-----ccccccc-----chhhhhhccccceEEEeCCCc
Confidence            357999995 99999999999876 467776554433211     1111111     122344556899999887654

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=95.35  E-value=0.014  Score=40.78  Aligned_cols=36  Identities=28%  Similarity=0.661  Sum_probs=32.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRS   92 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~   92 (286)
                      .++|+|.|| |++|..++..|.+.|.+|+++.|.+.-
T Consensus        35 ~k~v~VIGg-G~iG~E~A~~l~~~g~~Vtvie~~~~~   70 (133)
T d1q1ra2          35 DNRLVVIGG-GYIGLEVAATAIKANMHVTLLDTAARV   70 (133)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSST
T ss_pred             CCEEEEECC-chHHHHHHHHHHhhCcceeeeeecccc
Confidence            468999997 999999999999999999999997643

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=95.33  E-value=0.011  Score=44.15  Aligned_cols=72  Identities=10%  Similarity=-0.018  Sum_probs=51.1

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccccCCC
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFGS  134 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~~~~  134 (286)
                      ..++|.|.|. |.||+.+++.|..-|.+|...+|..........        ..+....+++++++.+|+|+.+......
T Consensus        43 ~~~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~--------~~~~~~~~l~~~l~~sD~v~~~~plt~~  113 (188)
T d2naca1          43 EAMHVGTVAA-GRIGLAVLRRLAPFDVHLHYTDRHRLPESVEKE--------LNLTWHATREDMYPVCDVVTLNCPLHPE  113 (188)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHGGGTCEEEEECSSCCCHHHHHH--------HTCEECSSHHHHGGGCSEEEECSCCCTT
T ss_pred             cccceeeccc-cccchhhhhhhhccCceEEEEeecccccccccc--------ccccccCCHHHHHHhccchhhccccccc
Confidence            3578999995 999999999999989999999987543211100        0112234577889999999887765543


Q ss_pred             c
Q 023205          135 N  135 (286)
Q Consensus       135 ~  135 (286)
                      .
T Consensus       114 T  114 (188)
T d2naca1         114 T  114 (188)
T ss_dssp             T
T ss_pred             c
Confidence            3

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=95.30  E-value=0.031  Score=41.20  Aligned_cols=39  Identities=26%  Similarity=0.381  Sum_probs=34.3

Q ss_pred             CCCCCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCC
Q 023205           52 PPPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGR   91 (286)
Q Consensus        52 ~~~~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~   91 (286)
                      +...+++|+|.|| |..|-..+..|.++||+|+++.+.+.
T Consensus        39 ~~~~~k~V~IIGa-GPAGL~AA~~la~~G~~Vtl~E~~~~   77 (179)
T d1ps9a3          39 PAVQKKNLAVVGA-GPAGLAFAINAAARGHQVTLFDAHSE   77 (179)
T ss_dssp             SCSSCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred             CCCCCcEEEEECc-cHHHHHHHHHHHhhccceEEEeccCc
Confidence            3445789999997 99999999999999999999998754

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=95.22  E-value=0.0034  Score=47.29  Aligned_cols=34  Identities=21%  Similarity=0.190  Sum_probs=28.3

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCc
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRS   92 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~   92 (286)
                      |+|.|.| .|++|..++..| ++|++|++++-++..
T Consensus         1 MkI~ViG-lG~vGl~~a~~~-a~g~~V~g~Din~~~   34 (196)
T d1dlja2           1 MKIAVAG-SGYVGLSLGVLL-SLQNEVTIVDILPSK   34 (196)
T ss_dssp             CEEEEEC-CSHHHHHHHHHH-TTTSEEEEECSCHHH
T ss_pred             CEEEEEC-CChhHHHHHHHH-HCCCcEEEEECCHHH
Confidence            6899998 699999998655 679999999977543

>d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.20  E-value=0.047  Score=39.87  Aligned_cols=98  Identities=10%  Similarity=0.121  Sum_probs=57.7

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCC-CeEEEEecCCCcc-cccccCCceeEEeccCC-----------CHhHHHHHhcC
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRG-LTVASLSRSGRSS-LRDSWANNVIWHQGNLL-----------SSDSWKEALDG  121 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g-~~V~~l~R~~~~~-~~~~~~~~~~~i~~Dl~-----------d~~~~~~~~~~  121 (286)
                      |.++|.|-|- |.||+.+++.|++++ .+|+++.-..+.. .......+...+..+..           ....+..++++
T Consensus         1 M~irIaINGf-GRIGR~v~Ral~~~~dieiVaINd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (172)
T d2czca2           1 MKVKVGVNGY-GTIGKRVAYAVTKQDDMELIGITKTKPDFEAYRAKELGIPVYAASEEFIPRFEKEGFEVAGTLNDLLEK   79 (172)
T ss_dssp             CCEEEEEECC-SHHHHHHHHHHHTCTTEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHHTCCCSCBHHHHHTT
T ss_pred             CcEEEEEECC-CHHHHHHHHHHHhCCCceEEEEecCCChHHHHHhhhcCceeecccccceeeecccCccccchhhhhhcc
Confidence            5679999995 999999999999875 5777766432221 11111112233332221           12245556678


Q ss_pred             CCEEEEccccCCCcchhhhhhhHHHHHHHHHHHHcCCCEEEEEec
Q 023205          122 VTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISA  166 (286)
Q Consensus       122 ~d~vi~~a~~~~~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss  166 (286)
                      +|+|+-|.|.+...            .-++.-.++|+ +.|++|+
T Consensus        80 vDvViEcTG~f~~~------------~~~~~hl~~G~-k~Vi~s~  111 (172)
T d2czca2          80 VDIIVDATPGGIGA------------KNKPLYEKAGV-KAIFQGG  111 (172)
T ss_dssp             CSEEEECCSTTHHH------------HHHHHHHHHTC-EEEECTT
T ss_pred             CCEEEECCCCCCCH------------HHHHHHHHcCC-CEEEECC
Confidence            99999998875211            12333446787 5666665

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.19  E-value=0.051  Score=39.56  Aligned_cols=81  Identities=20%  Similarity=0.145  Sum_probs=53.4

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccC-CceeEEeccC--CCHhHHHHHhcCCCEEEEcc
Q 023205           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWA-NNVIWHQGNL--LSSDSWKEALDGVTAVISCV  129 (286)
Q Consensus        53 ~~~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~-~~~~~i~~Dl--~d~~~~~~~~~~~d~vi~~a  129 (286)
                      ...+++|+|.|-+.-+|+.++..|+++|..|.....+.......... .-......|+  ..++.+++....+|+||..+
T Consensus        26 ~l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lk~~~~~aDIvIsav  105 (171)
T d1edza1          26 RLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSEDLLKKCSLDSDVVITGV  105 (171)
T ss_dssp             TTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCCCEEEEEEECCHHHHHHHHHHCSEEEECC
T ss_pred             CCCCCEEEEECCccccHHHHHHHHHHCCCEEEEeccccccccccccceeeeeeccccccccchhHHhhccccCCEEEEcc
Confidence            34578999999999999999999999999998776543221110000 0000011122  34566888888899999998


Q ss_pred             ccCC
Q 023205          130 GGFG  133 (286)
Q Consensus       130 ~~~~  133 (286)
                      |..+
T Consensus       106 G~p~  109 (171)
T d1edza1         106 PSEN  109 (171)
T ss_dssp             CCTT
T ss_pred             CCCc
Confidence            7644

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=95.16  E-value=0.011  Score=42.20  Aligned_cols=35  Identities=20%  Similarity=0.314  Sum_probs=30.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCC--CeEEEEecCC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRG--LTVASLSRSG   90 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g--~~V~~l~R~~   90 (286)
                      |++|.|.|+||.||...++-+.+..  ++|.+++=..
T Consensus         1 MK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~   37 (151)
T d1q0qa2           1 MKQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGK   37 (151)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESS
T ss_pred             CCeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecC
Confidence            5789999999999999999988874  6888887654

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=95.10  E-value=0.017  Score=44.90  Aligned_cols=35  Identities=26%  Similarity=0.432  Sum_probs=32.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGR   91 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~   91 (286)
                      .+||+|.|| |..|..++..|.++|++|+++.|++.
T Consensus         4 ~~kV~IiGa-G~aGl~~A~~L~~~G~~v~v~Er~~~   38 (265)
T d2voua1           4 TDRIAVVGG-SISGLTAALMLRDAGVDVDVYERSPQ   38 (265)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCcEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            468999997 99999999999999999999998754

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=95.08  E-value=0.012  Score=42.16  Aligned_cols=36  Identities=19%  Similarity=0.266  Sum_probs=30.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHC--CCeEEEEecCCC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDR--GLTVASLSRSGR   91 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~--g~~V~~l~R~~~   91 (286)
                      +++|.|.|+||.||...++-+.+.  .++|.+++=+..
T Consensus         2 pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~N   39 (150)
T d1r0ka2           2 PRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANRN   39 (150)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESSC
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCCC
Confidence            579999999999999999999886  478888876543

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=95.06  E-value=0.013  Score=40.36  Aligned_cols=36  Identities=22%  Similarity=0.350  Sum_probs=32.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRS   92 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~   92 (286)
                      +++++|.|| |++|-.++..|.+.|.+|+++.|.+.-
T Consensus        25 p~~~viiG~-G~iglE~A~~~~~~G~~Vtvi~~~~~~   60 (123)
T d1dxla2          25 PKKLVVIGA-GYIGLEMGSVWGRIGSEVTVVEFASEI   60 (123)
T ss_dssp             CSEEEESCC-SHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred             CCeEEEEcc-chHHHHHHHHHHhcCCeEEEEEEcccc
Confidence            578999997 999999999999999999999998654

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=95.05  E-value=0.014  Score=42.68  Aligned_cols=74  Identities=19%  Similarity=0.162  Sum_probs=43.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHh-----cCCCEEEEcc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEAL-----DGVTAVISCV  129 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~-----~~~d~vi~~a  129 (286)
                      ..+|+|.|+ |.+|...++.+...|. .|++.++++++........-..++..+ .+.+.+.+.+     .++|+||.+.
T Consensus        29 G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~ak~lGa~~~i~~~-~~~~~~~~~~~~~~~~g~D~vid~~  106 (176)
T d2fzwa2          29 GSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQ-DFSKPIQEVLIEMTDGGVDYSFECI  106 (176)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSEEECGG-GCSSCHHHHHHHHTTSCBSEEEECS
T ss_pred             CCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHHHHHHHhCCcEEEeCC-chhhHHHHHHHHHcCCCCcEeeecC
Confidence            568999998 6789999999988885 666676665542111111112222211 1112222222     4689999997


Q ss_pred             cc
Q 023205          130 GG  131 (286)
Q Consensus       130 ~~  131 (286)
                      |.
T Consensus       107 G~  108 (176)
T d2fzwa2         107 GN  108 (176)
T ss_dssp             CC
T ss_pred             CC
Confidence            65

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=95.04  E-value=0.16  Score=39.05  Aligned_cols=98  Identities=14%  Similarity=0.133  Sum_probs=60.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCCCccc--c----------------------cccCCceeEEeccC-
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSL--R----------------------DSWANNVIWHQGNL-  109 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~--~----------------------~~~~~~~~~i~~Dl-  109 (286)
                      ..+|+|.|+ |.+|++++..|...|. ++++++.+.-...  .                      ....+.+++...+. 
T Consensus        30 ~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~Ve~sNL~RQ~l~~~~diG~~K~~~a~~~l~~~np~~~i~~~~~~  108 (247)
T d1jw9b_          30 DSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNAL  108 (247)
T ss_dssp             HCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSC
T ss_pred             CCCEEEECC-CHHHHHHHHHHHHcCCCeEEEECCcccchhhhhhhccccHhhcCchHHHHHHHHHHHhhcccchhhhhhh
Confidence            358999996 9999999999999995 7787776532210  0                      01123444443333 


Q ss_pred             CCHhHHHHHhcCCCEEEEccccCCCcchhhhhhhHHHHHHHHHHHHcCCCEEEEEec
Q 023205          110 LSSDSWKEALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISA  166 (286)
Q Consensus       110 ~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss  166 (286)
                      .+.+.....+.+.|+|+.+...           ......+-++|.+.+++ +|+.+.
T Consensus       109 ~~~~~~~~~~~~~divid~~d~-----------~~~~~~in~~~~~~~ip-~i~g~~  153 (247)
T d1jw9b_         109 LDDAELAALIAEHDLVLDCTDN-----------VAVRNQLNAGCFAAKVP-LVSGAA  153 (247)
T ss_dssp             CCHHHHHHHHHTSSEEEECCSS-----------HHHHHHHHHHHHHHTCC-EEEEEE
T ss_pred             hhhccccccccccceeeeccch-----------hhhhhhHHHHHHHhCCC-cccccc
Confidence            2345566777888999877422           11222445567777764 555544

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=95.03  E-value=0.018  Score=42.03  Aligned_cols=75  Identities=15%  Similarity=0.031  Sum_probs=45.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHh--cCCCEEEEcccc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEAL--DGVTAVISCVGG  131 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~--~~~d~vi~~a~~  131 (286)
                      ..+|+|.|+ |.+|...++.+...|. .|++.++++++..........+++..+=.+.+.+.+..  +++|+||.+.|.
T Consensus        33 g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~g~d~vid~~g~  110 (172)
T d1h2ba2          33 GAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGADHVVDARRDPVKQVMELTRGRGVNVAMDFVGS  110 (172)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHTTCSEEEETTSCHHHHHHHHTTTCCEEEEEESSCC
T ss_pred             CCEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhHHHHHHhhcccceeecCcccHHHHHHHhhCCCCceEEEEecCc
Confidence            458999986 9999999998887775 66777776544211111122334433222223333333  258999999875

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=95.02  E-value=0.027  Score=41.19  Aligned_cols=75  Identities=12%  Similarity=0.095  Sum_probs=47.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCC-CeEEEEecCCCcccccccCCceeEE-eccCCC-HhHHHHHh--cCCCEEEEccc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRG-LTVASLSRSGRSSLRDSWANNVIWH-QGNLLS-SDSWKEAL--DGVTAVISCVG  130 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g-~~V~~l~R~~~~~~~~~~~~~~~~i-~~Dl~d-~~~~~~~~--~~~d~vi~~a~  130 (286)
                      ..+|+|.|+ |.+|...+..+...| .+|++.++++++............+ ..|-.+ .+...+..  .++|++|.+.|
T Consensus        29 GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~~Ga~~~i~~~~~~~~~~~~~~~~~~~G~D~vid~~G  107 (176)
T d2jhfa2          29 GSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIG  107 (176)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSC
T ss_pred             CCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHHHHhCCeeEEecCCchhHHHHHHHHHhcCCCCEEEecCC
Confidence            568999999 679999999999988 5889999887663222111122222 122222 22222222  46999999977


Q ss_pred             c
Q 023205          131 G  131 (286)
Q Consensus       131 ~  131 (286)
                      .
T Consensus       108 ~  108 (176)
T d2jhfa2         108 R  108 (176)
T ss_dssp             C
T ss_pred             c
Confidence            6

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=94.86  E-value=0.046  Score=39.92  Aligned_cols=75  Identities=13%  Similarity=0.049  Sum_probs=46.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCCCcccccccCCceeEEeccCCC--HhHHHHHh--cCCCEEEEccc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSLRDSWANNVIWHQGNLLS--SDSWKEAL--DGVTAVISCVG  130 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d--~~~~~~~~--~~~d~vi~~a~  130 (286)
                      ..+|+|.|+ |.+|...++.+...|. +|++.++++++........-..++...-.|  .+......  .++|++|.+.+
T Consensus        28 G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~~lGa~~~i~~~~~d~~~~~~~~~~~~~G~d~vid~~g  106 (174)
T d1p0fa2          28 GSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLNPKDYDKPIYEVICEKTNGGVDYAVECAG  106 (174)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSC
T ss_pred             CCEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHHHHHHHcCCcEEEcCCCchhHHHHHHHHhcCCCCcEEEEcCC
Confidence            568999996 9999999999998885 788888887653211111122233211112  12222222  36899999876


Q ss_pred             c
Q 023205          131 G  131 (286)
Q Consensus       131 ~  131 (286)
                      .
T Consensus       107 ~  107 (174)
T d1p0fa2         107 R  107 (174)
T ss_dssp             C
T ss_pred             C
Confidence            5

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=94.85  E-value=0.018  Score=39.78  Aligned_cols=35  Identities=23%  Similarity=0.384  Sum_probs=31.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGR   91 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~   91 (286)
                      +++++|.|| |+||..++..|.+.|.+|+++.|.+.
T Consensus        26 p~~vvIiGg-G~IG~E~A~~~~~~G~~Vtive~~~~   60 (125)
T d1ojta2          26 PGKLLIIGG-GIIGLEMGTVYSTLGSRLDVVEMMDG   60 (125)
T ss_dssp             CSEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CCeEEEECC-CHHHHHHHHHhhcCCCEEEEEEeecc
Confidence            578999997 99999999999999999999998753

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=94.80  E-value=0.035  Score=37.81  Aligned_cols=35  Identities=17%  Similarity=0.150  Sum_probs=31.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGR   91 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~   91 (286)
                      .++|+|.|| |++|..++..|.+.|.+|.++.|.+.
T Consensus        22 ~~~vvVvGg-G~ig~E~A~~l~~~g~~vt~i~~~~~   56 (121)
T d1mo9a2          22 GSTVVVVGG-SKTAVEYGCFFNATGRRTVMLVRTEP   56 (121)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcchhheEeeccch
Confidence            578999996 99999999999999999999999754

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=94.76  E-value=0.012  Score=43.77  Aligned_cols=36  Identities=19%  Similarity=0.363  Sum_probs=32.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRS   92 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~   92 (286)
                      -++|.|.|+ |.+|+.++..++..|++|++++++++.
T Consensus         4 I~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~   39 (186)
T d1wdka3           4 VKQAAVLGA-GIMGGGIAYQSASKGTPILMKDINEHG   39 (186)
T ss_dssp             CSSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHHH
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHHH
Confidence            468999998 999999999999999999999998653

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=94.58  E-value=0.021  Score=42.21  Aligned_cols=35  Identities=17%  Similarity=0.217  Sum_probs=31.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCCC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGR   91 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~-~V~~l~R~~~   91 (286)
                      ++||+|.|| |..|-..+..|.++|+ +|+++.|...
T Consensus         4 ~~kVaIIGa-GpaGl~aA~~l~~~G~~~V~v~E~~~~   39 (196)
T d1gtea4           4 SAKIALLGA-GPASISCASFLARLGYSDITIFEKQEY   39 (196)
T ss_dssp             GCCEEEECC-SHHHHHHHHHHHHTTCCCEEEEESSSS
T ss_pred             CCEEEEECC-hHHHHHHHHHHHHCCCCeEEEEEecCc
Confidence            578999997 9999999999999998 5999998754

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=94.57  E-value=0.025  Score=40.95  Aligned_cols=73  Identities=19%  Similarity=0.115  Sum_probs=46.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccC-CC-HhHHHHHhcCCCEEEEccc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNL-LS-SDSWKEALDGVTAVISCVG  130 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl-~d-~~~~~~~~~~~d~vi~~a~  130 (286)
                      ..+|+|.|+ |.+|...+..+...|.+|++.++++++... ...-+...+...- .| .+.+.+...+.+.+|.+++
T Consensus        28 g~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~-~k~~Ga~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  102 (168)
T d1rjwa2          28 GEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLEL-AKELGADLVVNPLKEDAAKFMKEKVGGVHAAVVTAV  102 (168)
T ss_dssp             TCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHH-HHHTTCSEEECTTTSCHHHHHHHHHSSEEEEEESSC
T ss_pred             CCEEEEeec-ccchhhhhHHHhcCCCeEeccCCCHHHhhh-hhhcCcceecccccchhhhhcccccCCCceEEeecC
Confidence            568999975 999999999999899999999987655211 1112233332211 12 2345555566777776654

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=94.56  E-value=0.062  Score=39.28  Aligned_cols=75  Identities=11%  Similarity=0.077  Sum_probs=47.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCC-CeEEEEecCCCcccccccCCceeEEe-ccCCC-HhHHHHHh--cCCCEEEEccc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRG-LTVASLSRSGRSSLRDSWANNVIWHQ-GNLLS-SDSWKEAL--DGVTAVISCVG  130 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g-~~V~~l~R~~~~~~~~~~~~~~~~i~-~Dl~d-~~~~~~~~--~~~d~vi~~a~  130 (286)
                      ..+|+|+|+ |.+|...++.+...| .+|+++++++++........-..++. -|-.+ .+.+.+..  .++|++|.+.+
T Consensus        30 g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak~~GA~~~in~~~~~~~~~~~~~~~~g~G~d~vi~~~g  108 (176)
T d1d1ta2          30 GSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGATECISPKDSTKPISEVLSEMTGNNVGYTFEVIG  108 (176)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHHTCSEEECGGGCSSCHHHHHHHHHTSCCCEEEECSC
T ss_pred             CCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHHHHHHhcCCcEEECccccchHHHHHHHHhccccceEEEEeCC
Confidence            568999986 999999999999998 58999999877632111111112221 12211 23333333  46899999876


Q ss_pred             c
Q 023205          131 G  131 (286)
Q Consensus       131 ~  131 (286)
                      .
T Consensus       109 ~  109 (176)
T d1d1ta2         109 H  109 (176)
T ss_dssp             C
T ss_pred             c
Confidence            5

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=94.47  E-value=0.045  Score=40.05  Aligned_cols=75  Identities=17%  Similarity=0.178  Sum_probs=46.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCCCcccccccCCceeEEeccCCC--HhHHHHHh--cCCCEEEEccc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSLRDSWANNVIWHQGNLLS--SDSWKEAL--DGVTAVISCVG  130 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d--~~~~~~~~--~~~d~vi~~a~  130 (286)
                      ..+|+|+|+ |.+|...+..+...|. .|++.++++.+...........++...-.|  .+.+.+..  .++|+||.|.|
T Consensus        29 G~~VlV~G~-G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a~~~Ga~~~i~~~~~~~~~~~~~~~~~~~G~d~vie~~G  107 (174)
T d1e3ia2          29 GSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLNPRELDKPVQDVITELTAGGVDYSLDCAG  107 (174)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHHTSCBSEEEESSC
T ss_pred             CCEEEEECC-ChHHHHHHHHHHHhCCceeeeeccchHHHHHHHHhCCCcccCCccchhhhhhhHhhhhcCCCcEEEEecc
Confidence            568999985 9999999999999997 677778776552211111122233222212  22222222  47999999987


Q ss_pred             c
Q 023205          131 G  131 (286)
Q Consensus       131 ~  131 (286)
                      .
T Consensus       108 ~  108 (174)
T d1e3ia2         108 T  108 (174)
T ss_dssp             C
T ss_pred             c
Confidence            5

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=94.36  E-value=0.022  Score=44.64  Aligned_cols=31  Identities=26%  Similarity=0.405  Sum_probs=29.4

Q ss_pred             EEEEcCCChhHHHHHHHHHHCCCeEEEEecCC
Q 023205           59 LLVLGGNGFVGSHICREALDRGLTVASLSRSG   90 (286)
Q Consensus        59 VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~   90 (286)
                      |+|.|| |.+|..++.+|.++|++|+++.++.
T Consensus         7 vvIIGa-Gi~Gls~A~~La~~G~~V~vlE~~~   37 (276)
T d1ryia1           7 AVVIGG-GIIGSAIAYYLAKENKNTALFESGT   37 (276)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            999997 9999999999999999999999875

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=94.26  E-value=0.03  Score=45.17  Aligned_cols=35  Identities=31%  Similarity=0.628  Sum_probs=31.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGR   91 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~   91 (286)
                      .|+|+|.|| |.-|...+..|.++|++|.++.++..
T Consensus         2 ~KKI~IIGa-G~sGL~aA~~L~k~G~~V~viEk~~~   36 (314)
T d2bi7a1           2 SKKILIVGA-GFSGAVIGRQLAEKGHQVHIIDQRDH   36 (314)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred             CCEEEEECC-cHHHHHHHHHHHhCCCCEEEEECCCC
Confidence            579999997 99999999999999999999998764

>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Acetaldehyde dehydrogenase (acylating)
species: Pseudomonas sp. [TaxId: 306]

Probab=94.23  E-value=0.02  Score=41.25  Aligned_cols=71  Identities=13%  Similarity=0.190  Sum_probs=39.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHH-CC-CeEEEE-ecCCCccc-ccccCCceeEEeccCCCHhHHHHH--hcCCCEEEEcc
Q 023205           56 SEKLLVLGGNGFVGSHICREALD-RG-LTVASL-SRSGRSSL-RDSWANNVIWHQGNLLSSDSWKEA--LDGVTAVISCV  129 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~-~g-~~V~~l-~R~~~~~~-~~~~~~~~~~i~~Dl~d~~~~~~~--~~~~d~vi~~a  129 (286)
                      +.+|.|.| +|.+|..+...+++ .. .+++++ +|+..... ......++.+...   ..+++.+.  +.++|+||.+.
T Consensus         4 kirvaIIG-aG~ig~~~~~~~l~~~~~~el~avas~~~~~~~~~~a~~~~i~~~~~---~~d~l~~~~~~~~iDiVf~AT   79 (157)
T d1nvmb1           4 KLKVAIIG-SGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTTYA---GVEGLIKLPEFADIDFVFDAT   79 (157)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTCCEESS---HHHHHHHSGGGGGEEEEEECS
T ss_pred             CcEEEEEc-CcHHHHHHHHHHHhhCCcceEEEEEecchhccchhhhhhcCCccccc---ceeeeeecccccccCEEEEcC
Confidence            46899999 89999875544444 43 477776 45544211 1111123444322   23444433  45799999874


Q ss_pred             c
Q 023205          130 G  130 (286)
Q Consensus       130 ~  130 (286)
                      .
T Consensus        80 p   80 (157)
T d1nvmb1          80 S   80 (157)
T ss_dssp             C
T ss_pred             C
Confidence            3

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=93.89  E-value=0.03  Score=44.80  Aligned_cols=36  Identities=19%  Similarity=0.332  Sum_probs=32.3

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCC
Q 023205           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSG   90 (286)
Q Consensus        54 ~~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~   90 (286)
                      ..+++|+|+|| |..|-..+..|.++|++|.++.+++
T Consensus        28 ~~pkkV~IIGa-G~aGLsaA~~L~~~G~~V~vlE~~~   63 (370)
T d2iida1          28 SNPKHVVIVGA-GMAGLSAAYVLAGAGHQVTVLEASE   63 (370)
T ss_dssp             SSCCEEEEECC-BHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            34679999997 9999999999999999999999865

>d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Phosphopantothenoylcysteine synthetase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.83  E-value=0.091  Score=41.71  Aligned_cols=33  Identities=24%  Similarity=0.198  Sum_probs=28.9

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCeEEEEecCC
Q 023205           58 KLLVLGGNGFVGSHICREALDRGLTVASLSRSG   90 (286)
Q Consensus        58 ~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~   90 (286)
                      +.+=--+||..|.+++++|+.+|++|+++.+..
T Consensus        38 R~ItN~SSGk~G~alA~~~~~~Ga~V~li~g~~   70 (290)
T d1p9oa_          38 RFLDNFSSGRRGATSAEAFLAAGYGVLFLYRAR   70 (290)
T ss_dssp             EEEEECCCCHHHHHHHHHHHHTTCEEEEEEETT
T ss_pred             eEeCCCCchHHHHHHHHHHHHcCCEEEEEecCC
Confidence            556567799999999999999999999998764

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=93.74  E-value=0.03  Score=39.85  Aligned_cols=35  Identities=23%  Similarity=0.378  Sum_probs=31.2

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCC
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSG   90 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~   90 (286)
                      ..++|||+|| |.+|..-++.|++.|.+|+++....
T Consensus        12 ~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap~~   46 (150)
T d1kyqa1          12 KDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSPDL   46 (150)
T ss_dssp             TTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCC
Confidence            4689999998 9999999999999999999997543

>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=93.71  E-value=0.042  Score=44.51  Aligned_cols=36  Identities=22%  Similarity=0.337  Sum_probs=31.6

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCC--CeEEEEecCCC
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRG--LTVASLSRSGR   91 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g--~~V~~l~R~~~   91 (286)
                      .+|+|+|+|| |.-|-..+..|++.+  ++|+++.|+..
T Consensus         3 ~~KrVaIIGa-G~sGl~~A~~L~~~~~~~~v~vfEk~~~   40 (335)
T d2gv8a1           3 TIRKIAIIGA-GPSGLVTAKALLAEKAFDQVTLFERRGS   40 (335)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHTTTCCSEEEEECSSSS
T ss_pred             CCCeEEEECc-CHHHHHHHHHHHHhCCCCCEEEEECCCC
Confidence            4789999997 999999999999876  59999999854

>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

Probab=93.70  E-value=0.16  Score=36.80  Aligned_cols=105  Identities=12%  Similarity=0.086  Sum_probs=63.4

Q ss_pred             CCeEEEEcCCChhHHH--HHHHHHHC----CCeEEEEecCCCcccc---------cccCCceeEEeccCCCHhHHHHHhc
Q 023205           56 SEKLLVLGGNGFVGSH--ICREALDR----GLTVASLSRSGRSSLR---------DSWANNVIWHQGNLLSSDSWKEALD  120 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~--l~~~Ll~~----g~~V~~l~R~~~~~~~---------~~~~~~~~~i~~Dl~d~~~~~~~~~  120 (286)
                      .+||.|.|| |.+|..  ++..|+..    +.++..++.++++...         .......++..     ..+.+++++
T Consensus         2 ~mKI~iIGa-Gsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~i~~-----~td~~eaL~   75 (171)
T d1obba1           2 SVKIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEK-----TMNLDDVII   75 (171)
T ss_dssp             CCEEEEETT-TCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEE-----ESCHHHHHT
T ss_pred             CcEEEEECC-CHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCCeEEEE-----eCChhhccc
Confidence            469999997 888865  34445543    3589999998654211         01122333322     223667889


Q ss_pred             CCCEEEEccccCCCcc------------------------------hhhhhhhHHHHHHHHHHHHcCCCEEEEEec
Q 023205          121 GVTAVISCVGGFGSNS------------------------------YMYKINGTANINAIRAASEKGVKRFVYISA  166 (286)
Q Consensus       121 ~~d~vi~~a~~~~~~~------------------------------~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss  166 (286)
                      ++|+|+..++......                              ....-|+.-...+++..++...+-+++.-|
T Consensus        76 dad~Vv~~~~~g~~~~~~~~~~i~~~~g~~~~~~~~~~~~~g~~~~~~~~rn~~i~~~i~~~i~~~~p~a~~i~~T  151 (171)
T d1obba1          76 DADFVINTAMVGGHTYLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEKLSPKAWYLQAA  151 (171)
T ss_dssp             TCSEEEECCCTTHHHHHHHHHHHHHHTTCTTCTTCBTTBCCTTCCSSSCHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             CCCeEeeecccccccceeeehhcchhhhhccCCCccccCCCCCcceeeecchHHHHHHHHHHHHHHCcCeEEEEEC
Confidence            9999999986532110                              001235555667778887777666665555

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=93.70  E-value=0.11  Score=38.60  Aligned_cols=73  Identities=19%  Similarity=0.127  Sum_probs=46.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCCCcccccccCCceeEEeccCCCH---hHHHHHhc--CCCEEEEcc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSLRDSWANNVIWHQGNLLSS---DSWKEALD--GVTAVISCV  129 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~---~~~~~~~~--~~d~vi~~a  129 (286)
                      ..+|+|.|+ |.+|...+..+...|. +|++.++++++..... .-+...+. |..+.   +.+.+...  ++|++|.+.
T Consensus        26 G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~-~~Ga~~~~-~~~~~~~~~~i~~~t~g~g~D~vid~v  102 (195)
T d1kola2          26 GSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAK-AQGFEIAD-LSLDTPLHEQIAALLGEPEVDCAVDAV  102 (195)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-HTTCEEEE-TTSSSCHHHHHHHHHSSSCEEEEEECC
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhhcccceeeecccchhhHhhh-hccccEEE-eCCCcCHHHHHHHHhCCCCcEEEEECc
Confidence            568999986 9999888888877775 7888888765422111 11333332 22222   33444433  589999998


Q ss_pred             cc
Q 023205          130 GG  131 (286)
Q Consensus       130 ~~  131 (286)
                      |.
T Consensus       103 G~  104 (195)
T d1kola2         103 GF  104 (195)
T ss_dssp             CT
T ss_pred             cc
Confidence            74

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=93.69  E-value=0.038  Score=43.45  Aligned_cols=33  Identities=24%  Similarity=0.428  Sum_probs=30.6

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCC
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSG   90 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~   90 (286)
                      |||+|.|| |.-|-..+.+|.+.|++|.++.+++
T Consensus         2 KkV~IIGa-G~aGL~aA~~La~~G~~V~vlE~~~   34 (373)
T d1seza1           2 KRVAVIGA-GVSGLAAAYKLKIHGLNVTVFEAEG   34 (373)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTTSCEEEEECSSS
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            78999997 9999999999999999999999764

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=93.43  E-value=0.034  Score=43.64  Aligned_cols=33  Identities=27%  Similarity=0.452  Sum_probs=30.5

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCC
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSG   90 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~   90 (286)
                      |+|+|.|| |.-|-..+.+|.++|++|.++.++.
T Consensus         1 m~V~IIGa-G~aGL~aA~~L~~~G~~V~vlE~~~   33 (347)
T d2ivda1           1 MNVAVVGG-GISGLAVAHHLRSRGTDAVLLESSA   33 (347)
T ss_dssp             CCEEEECC-BHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCCCEEEEecCC
Confidence            57999997 9999999999999999999999864

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=93.42  E-value=0.067  Score=40.86  Aligned_cols=37  Identities=24%  Similarity=0.437  Sum_probs=33.0

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCC
Q 023205           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGR   91 (286)
Q Consensus        54 ~~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~   91 (286)
                      ...++|+|.|| |..|-..+.+|.++|++|+++.++..
T Consensus        47 ~~~k~VvIIGa-GpAGl~aA~~l~~~G~~v~l~E~~~~   83 (233)
T d1djqa3          47 KNKDSVLIVGA-GPSGSEAARVLMESGYTVHLTDTAEK   83 (233)
T ss_dssp             SSCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             cCCceEEEEcc-cHHHHHHHHHHHHhccceeeEeeccc
Confidence            34679999997 99999999999999999999988653

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.42  E-value=0.07  Score=44.88  Aligned_cols=70  Identities=16%  Similarity=0.256  Sum_probs=47.6

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCCCcc--cc----------------------cccCC--ceeEEeccC
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSS--LR----------------------DSWAN--NVIWHQGNL  109 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~--~~----------------------~~~~~--~~~~i~~Dl  109 (286)
                      .+|||.|+ |.+|+++++.|...|. ++.+++.+.=..  ..                      ....+  ++..+..++
T Consensus        38 ~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~D~Ve~sNL~RQflf~~~diG~~Ka~~a~~~l~~~np~v~i~~~~~~i  116 (426)
T d1yovb1          38 CKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHFNKI  116 (426)
T ss_dssp             CCEEEECS-STTHHHHHHHHHTTTCCCEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHSTTCCCEEECSCG
T ss_pred             CeEEEECC-CHHHHHHHHHHHHcCCCeEEEEECCCcchhhhcccccCChhHcCcHHHHHHHHHHHhhCCCCceEeeeccc
Confidence            48999998 7799999999999996 788887763210  00                      00112  455555555


Q ss_pred             CCHhHHHHHhcCCCEEEEcc
Q 023205          110 LSSDSWKEALDGVTAVISCV  129 (286)
Q Consensus       110 ~d~~~~~~~~~~~d~vi~~a  129 (286)
                      .+..  ...++++|+||.+.
T Consensus       117 ~~~~--~~~~~~~DlVi~~~  134 (426)
T d1yovb1         117 QDFN--DTFYRQFHIIVCGL  134 (426)
T ss_dssp             GGBC--HHHHTTCSEEEECC
T ss_pred             cchH--HHHHHhcchheecc
Confidence            4432  35788999999875

>d1iuka_ c.2.1.8 (A:) Hypothetical protein TT1466 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein TT1466
species: Thermus thermophilus [TaxId: 274]

Probab=93.35  E-value=0.093  Score=36.58  Aligned_cols=87  Identities=11%  Similarity=-0.020  Sum_probs=54.7

Q ss_pred             CCeEEEEcCC---ChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccccC
Q 023205           56 SEKLLVLGGN---GFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGF  132 (286)
Q Consensus        56 ~~~VlVtGat---G~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~~  132 (286)
                      .++|.|.|+|   +..|..+++.|++.||+++.+.-++....  .  .+...       ..++.++-..+|.|+-+..+ 
T Consensus        13 pksIAVVGaS~~~~k~g~~v~~~L~~~g~~~~~v~~~~~~~~--i--~g~~~-------~~~l~~i~~~iD~v~v~~p~-   80 (136)
T d1iuka_          13 AKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVNPRFQGEE--L--FGEEA-------VASLLDLKEPVDILDVFRPP-   80 (136)
T ss_dssp             CCEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEECGGGTTSE--E--TTEEC-------BSSGGGCCSCCSEEEECSCH-
T ss_pred             CCeEEEEeecCCCCCchHHHHHHHhcCCCCceEEEeccccce--e--eceec-------ccchhhccCCCceEEEeccH-
Confidence            4689999998   77999999999999999887765432110  0  01111       11122233457888887543 


Q ss_pred             CCcchhhhhhhHHHHHHHHHHHHcCCCEEEEEe
Q 023205          133 GSNSYMYKINGTANINAIRAASEKGVKRFVYIS  165 (286)
Q Consensus       133 ~~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~S  165 (286)
                                 .....+++.|.+.|++.+++-+
T Consensus        81 -----------~~v~~~v~~~~~~g~k~i~~q~  102 (136)
T d1iuka_          81 -----------SALMDHLPEVLALRPGLVWLQS  102 (136)
T ss_dssp             -----------HHHTTTHHHHHHHCCSCEEECT
T ss_pred             -----------HHHHHHHHHHHhhCCCeEEEec
Confidence                       2233557777788887665433

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=93.32  E-value=0.048  Score=39.39  Aligned_cols=34  Identities=21%  Similarity=0.278  Sum_probs=29.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC--eEEEEecCC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGL--TVASLSRSG   90 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~--~V~~l~R~~   90 (286)
                      .|+|+|.|| |++|-.++..|.+.+.  +|+++.+++
T Consensus         2 gkrivIvGg-G~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           2 GRKVVVVGG-GTGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCcEEEECc-cHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            579999997 9999999999999874  788887765

>d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=93.31  E-value=0.046  Score=36.39  Aligned_cols=36  Identities=22%  Similarity=0.237  Sum_probs=29.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRS   92 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~   92 (286)
                      .|+|+|.|+ |.-|.-++.+|.+.+.+|+...|+...
T Consensus        32 gK~VlVVG~-g~Sa~dia~~l~~~ak~v~~~~~r~~~   67 (107)
T d2gv8a2          32 GESVLVVGG-ASSANDLVRHLTPVAKHPIYQSLLGGG   67 (107)
T ss_dssp             TCCEEEECS-SHHHHHHHHHHTTTSCSSEEEECTTCC
T ss_pred             CCeEEEECC-CCCHHHHHHHHHHhcCEEEEEEecCcc
Confidence            679999996 899999999999888777777766543

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=93.21  E-value=0.035  Score=43.84  Aligned_cols=35  Identities=17%  Similarity=0.272  Sum_probs=31.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGR   91 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~   91 (286)
                      +.+|+|.|| |-.|..++..|.++|++|.++.|+++
T Consensus         2 k~~V~IvGa-Gp~Gl~~A~~L~~~G~~v~vlE~~~~   36 (292)
T d1k0ia1           2 KTQVAIIGA-GPSGLLLGQLLHKAGIDNVILERQTP   36 (292)
T ss_dssp             BCSEEEECC-SHHHHHHHHHHHHHTCCEEEECSSCH
T ss_pred             CCCEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            347999997 99999999999999999999999864

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=93.05  E-value=0.051  Score=40.73  Aligned_cols=68  Identities=18%  Similarity=0.179  Sum_probs=45.7

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHh-cCCCEEEEcccc
Q 023205           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEAL-DGVTAVISCVGG  131 (286)
Q Consensus        54 ~~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~-~~~d~vi~~a~~  131 (286)
                      ...++|+|-| -|.+|+++++.|.+.|.+|++.+.+....... ...+.+.+     +.+   +++ .+||+++-||..
T Consensus        25 L~gk~v~IqG-~G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~~-~~~g~~~~-----~~~---~~~~~~~DI~iPcA~~   93 (201)
T d1c1da1          25 LDGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTERVAHA-VALGHTAV-----ALE---DVLSTPCDVFAPCAMG   93 (201)
T ss_dssp             STTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH-HHTTCEEC-----CGG---GGGGCCCSEEEECSCS
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEecchHHHHHHH-Hhhccccc-----Ccc---ccccccceeeeccccc
Confidence            4568999999 59999999999999999999887664331111 11122222     222   334 379999988754

>d2blna2 c.65.1.1 (A:1-203) Polymyxin resistance protein ArnA, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: Polymyxin resistance protein ArnA, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=92.99  E-value=0.2  Score=37.38  Aligned_cols=74  Identities=9%  Similarity=-0.025  Sum_probs=44.7

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccc---------cCCceeEEe-ccCCCHhHHHHHhc-CCCEE
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDS---------WANNVIWHQ-GNLLSSDSWKEALD-GVTAV  125 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~---------~~~~~~~i~-~Dl~d~~~~~~~~~-~~d~v  125 (286)
                      |+|+|.|. +..|..+++.|++.|++|.++.-.+++.....         ...++.++. .++.+++.++.+-+ .+|.+
T Consensus         1 Mkiv~~~~-~~~g~~~l~~L~~~g~~I~~Vvt~~~~~~~~~~~~~~~~~a~~~~i~~~~~~~~~~~~~~~~i~~~~~Dli   79 (203)
T d2blna2           1 MKTVVFAY-HDMGCLGIEALLAAGYEISAIFTHTDNPGEKAFYGSVARLAAERGIPVYAPDNVNHPLWVERIAQLSPDVI   79 (203)
T ss_dssp             CEEEEEEC-HHHHHHHHHHHHHTTCEEEEEECCCC------CCCCHHHHHHHHTCCEECCSCCCSHHHHHHHHHTCCSEE
T ss_pred             CeEEEEec-CHHHHHHHHHHHHCCCCEEEEEcCCCCCCcccccCHHHHHHHHcCCcceecccccchhhhhhhhhhcccce
Confidence            57888875 66799999999999999987664433211100         012455544 34555554433322 57888


Q ss_pred             EEcccc
Q 023205          126 ISCVGG  131 (286)
Q Consensus       126 i~~a~~  131 (286)
                      |.+.+.
T Consensus        80 i~~g~~   85 (203)
T d2blna2          80 FSFYYR   85 (203)
T ss_dssp             EEESCC
T ss_pred             eeeecc
Confidence            877654

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=92.86  E-value=0.15  Score=39.79  Aligned_cols=32  Identities=16%  Similarity=0.280  Sum_probs=29.5

Q ss_pred             EEEEcCCChhHHHHHHHHHHCCCeEEEEecCCC
Q 023205           59 LLVLGGNGFVGSHICREALDRGLTVASLSRSGR   91 (286)
Q Consensus        59 VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~   91 (286)
                      |+|.|| |..|..++.+|.++|++|+++.+...
T Consensus         6 vvIIGa-Gi~Gls~A~~La~~G~~V~viE~~~~   37 (281)
T d2gf3a1           6 VIVVGA-GSMGMAAGYQLAKQGVKTLLVDAFDP   37 (281)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSCS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            899997 99999999999999999999998653

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=92.71  E-value=0.32  Score=38.35  Aligned_cols=35  Identities=26%  Similarity=0.211  Sum_probs=30.5

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecC
Q 023205           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRS   89 (286)
Q Consensus        54 ~~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~   89 (286)
                      ...++|+|-|- |.+|+++++.|.+.|.+|++++-.
T Consensus        34 L~gktvaIqGf-GnVG~~~A~~L~e~Gakvv~vsD~   68 (293)
T d1hwxa1          34 FGDKTFAVQGF-GNVGLHSMRYLHRFGAKCVAVGES   68 (293)
T ss_dssp             STTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEEET
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEEcc
Confidence            34679999996 999999999999999999988754

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=92.68  E-value=0.054  Score=38.87  Aligned_cols=69  Identities=16%  Similarity=0.170  Sum_probs=53.4

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccccCC
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFG  133 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~~~  133 (286)
                      ..|+++|.|= |.+|+-+++.|...|.+|++...+|-..++. ..++.++.        .++++++..|++|-+.|-.+
T Consensus        22 aGk~vvV~GY-G~vGrG~A~~~rg~Ga~V~V~E~DPi~alqA-~mdGf~v~--------~~~~a~~~aDi~vTaTGn~~   90 (163)
T d1v8ba1          22 SGKIVVICGY-GDVGKGCASSMKGLGARVYITEIDPICAIQA-VMEGFNVV--------TLDEIVDKGDFFITCTGNVD   90 (163)
T ss_dssp             TTSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSCHHHHHHH-HTTTCEEC--------CHHHHTTTCSEEEECCSSSS
T ss_pred             cCCEEEEecc-cccchhHHHHHHhCCCEEEEEecCchhhHHH-HhcCCccC--------chhHccccCcEEEEcCCCCc
Confidence            3689999996 9999999999999999999999987553322 22444433        35688889999999877643

>d2vapa1 c.32.1.1 (A:23-231) Cell-division protein FtsZ {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=92.52  E-value=0.34  Score=36.23  Aligned_cols=102  Identities=15%  Similarity=0.149  Sum_probs=61.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC---eEEEEecCCCcccccccCCceeEEeccC-------------------CCHh
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGL---TVASLSRSGRSSLRDSWANNVIWHQGNL-------------------LSSD  113 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~---~V~~l~R~~~~~~~~~~~~~~~~i~~Dl-------------------~d~~  113 (286)
                      ..+|.|.|- |.-|..++..|.+.+.   +.++++-+... +. ......++..+.-                   .+.+
T Consensus        15 ~~ki~ViGv-GGaG~n~v~~l~~~~~~~v~~iainTD~~~-L~-~~~~~~ki~ig~~~t~g~Gag~~p~~g~~aa~e~~~   91 (209)
T d2vapa1          15 KAKITVVGC-GGAGNNTITRLKMEGIEGAKTVAINTDAQQ-LI-RTKADKKILIGKKLTRGLGAGGNPKIGEEAAKESAE   91 (209)
T ss_dssp             CCCEEEEEE-HHHHHHHHHHHHHHTCTTEEEEEEESBHHH-HH-TSCCSEEEECCTTTTTTBCCTTCHHHHHHHHHHTHH
T ss_pred             CCcEEEEEe-CChHHHHHHHHHHcCCCceEEEEEeCCHHH-Hh-cCCcchhcccccccccccccccchHHHHHHHHHHHH
Confidence            358999996 8889999999999874   44555544222 11 1111222222211                   2345


Q ss_pred             HHHHHhcCCCEEEEccccCCCcchhhhhhhHHHHHHHHHHHHcCCCEEEEEec
Q 023205          114 SWKEALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISA  166 (286)
Q Consensus       114 ~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss  166 (286)
                      .+.+.++++|.||-+||.....-.      .++.-+.+.+++.++.-+-+++-
T Consensus        92 ~I~~~l~~~d~vfi~AGlGGGTGs------gaapvia~~ake~g~lvv~ivtl  138 (209)
T d2vapa1          92 EIKAAIQDSDMVFITCGLGGGTGT------GSAPVVAEISKKIGALTVAVVTL  138 (209)
T ss_dssp             HHHHHHTTCSEEEEEEETTSSHHH------HHHHHHHHHHHHTTCEEEEEEEE
T ss_pred             HHHHhccCCCEEEEEEeCCCCccc------cHHHHHHHHHHHcCCcEEEEEec
Confidence            778888999999999987543221      12334678888888644444443

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.33  E-value=0.097  Score=41.65  Aligned_cols=34  Identities=24%  Similarity=0.454  Sum_probs=30.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSG   90 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~   90 (286)
                      ..+|+|.|| |.-|-..+.+|.++|++|.++-++.
T Consensus         5 ~~kViVIGa-G~aGL~aA~~L~~~G~~V~VlEa~~   38 (449)
T d2dw4a2           5 TGKVIIIGS-GVSGLAAARQLQSFGMDVTLLEARD   38 (449)
T ss_dssp             CCEEEEECC-BHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCcEEEECC-CHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            457999997 9999999999999999999998764

>d1d7ya1 c.3.1.5 (A:5-115,A:237-308) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=92.28  E-value=0.04  Score=40.36  Aligned_cols=33  Identities=18%  Similarity=0.205  Sum_probs=26.8

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEec
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSR   88 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R   88 (286)
                      |+.+|+|.|| |++|-.++..|.+.|.+|.++.+
T Consensus         2 m~a~VvIIGg-G~~G~e~A~~l~~~g~~v~i~~~   34 (183)
T d1d7ya1           2 LKAPVVVLGA-GLASVSFVAELRQAGYQGLITVV   34 (183)
T ss_dssp             CCSSEEEECC-SHHHHHHHHHHHHHTCCSCEEEE
T ss_pred             CCCCEEEECc-cHHHHHHHHHHHhcCCceEEEEE
Confidence            4567999996 99999999999999876555444

>d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=92.20  E-value=0.2  Score=36.21  Aligned_cols=106  Identities=13%  Similarity=0.018  Sum_probs=59.7

Q ss_pred             CCeEEEEcCC-ChhHHHHHHHHHHCC----CeEEEEecCCCccccc-----------ccCCceeEEeccCCCHhHHHHHh
Q 023205           56 SEKLLVLGGN-GFVGSHICREALDRG----LTVASLSRSGRSSLRD-----------SWANNVIWHQGNLLSSDSWKEAL  119 (286)
Q Consensus        56 ~~~VlVtGat-G~iG~~l~~~Ll~~g----~~V~~l~R~~~~~~~~-----------~~~~~~~~i~~Dl~d~~~~~~~~  119 (286)
                      ++||.|.||. .+.+..++..+....    .++..++.+++....+           ....+.++.  ..+|   ..+++
T Consensus         1 k~KI~iIGaGs~~~~~~~~~l~~~~~~~~~~eI~L~Di~e~~~~~~~~d~~~~~~~~~~~~~~~~~--~~td---~~~al   75 (169)
T d1s6ya1           1 RLKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAGVPIEIH--LTLD---RRRAL   75 (169)
T ss_dssp             CEEEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCCEEE--EESC---HHHHH
T ss_pred             CcEEEEECCChhhHHHHHHHHHHhccccCCCEEEEEcCCccHHHHHHHHHHHHHHHHhcCCCceee--ecCC---chhhc
Confidence            3689999972 234445544444432    3788888776542110           001122222  1223   45678


Q ss_pred             cCCCEEEEccccCCCcch------------------------hhhhhhHHHHHHHHHHHHcCCCEEEEEec
Q 023205          120 DGVTAVISCVGGFGSNSY------------------------MYKINGTANINAIRAASEKGVKRFVYISA  166 (286)
Q Consensus       120 ~~~d~vi~~a~~~~~~~~------------------------~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss  166 (286)
                      +++|+|+..++....+..                        ...-|+.....+++..++....-++++-|
T Consensus        76 ~gaDvVv~ta~~~~~~~~~r~~~i~~~~gi~~~~t~g~~~~~~~~~n~~i~~~i~~~i~~~~pda~~i~vt  146 (169)
T d1s6ya1          76 DGADFVTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEELCPDAWLINFT  146 (169)
T ss_dssp             TTCSEEEECCCTTHHHHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             CCCCEEEEccccCCCCCeehhhhhhhhcCceeccccCcchhhhccccHHHHHHHHHHHhhcCCCeEEEEeC
Confidence            999999999986532110                        01234455566777777777777777666

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=92.12  E-value=0.31  Score=33.24  Aligned_cols=74  Identities=16%  Similarity=0.338  Sum_probs=53.2

Q ss_pred             CCeEEEEcCCC----------hhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhc--CCC
Q 023205           56 SEKLLVLGGNG----------FVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD--GVT  123 (286)
Q Consensus        56 ~~~VlVtGatG----------~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~--~~d  123 (286)
                      .++|||.|+..          +.+.+.++.|.+.|++++.++-++..-...  .+-..-+..+....+.+.+.++  ..|
T Consensus         7 ~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~NP~TVstd--~d~aD~lYfePlt~e~v~~Ii~~E~pd   84 (127)
T d1a9xa3           7 IKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATIMTD--PEMADATYIEPIHWEVVRKIIEKERPD   84 (127)
T ss_dssp             CCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTCGGGC--GGGSSEEECSCCCHHHHHHHHHHHCCS
T ss_pred             CCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCCeEEEecCchHhhhcC--hhhcceeeeecCCHHHHHHHHHHhCcC
Confidence            57999999843          689999999999999999999887652211  1122233455667788888775  689


Q ss_pred             EEEEcccc
Q 023205          124 AVISCVGG  131 (286)
Q Consensus       124 ~vi~~a~~  131 (286)
                      .|+-..|.
T Consensus        85 ~il~~~GG   92 (127)
T d1a9xa3          85 AVLPTMGG   92 (127)
T ss_dssp             EEECSSSH
T ss_pred             CeEEEeee
Confidence            98866554

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=92.07  E-value=0.08  Score=40.03  Aligned_cols=31  Identities=19%  Similarity=0.299  Sum_probs=29.1

Q ss_pred             EEEEcCCChhHHHHHHHHHHCCCeEEEEecCC
Q 023205           59 LLVLGGNGFVGSHICREALDRGLTVASLSRSG   90 (286)
Q Consensus        59 VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~   90 (286)
                      |+|.|| |.-|...+..|.++|++|.++.++.
T Consensus         8 viViGa-G~~Gl~~A~~La~~G~~V~vlE~~~   38 (297)
T d2bcgg1           8 VIVLGT-GITECILSGLLSVDGKKVLHIDKQD   38 (297)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCCEEEEcCCC
Confidence            899995 9999999999999999999999975

>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=91.89  E-value=0.065  Score=42.70  Aligned_cols=35  Identities=14%  Similarity=0.286  Sum_probs=31.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGR   91 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~   91 (286)
                      |..|+|.|| |.-|..+++.|.++|++|.++.++..
T Consensus         1 M~dv~IIGa-G~sGl~~A~~L~~~g~~V~iiEk~~~   35 (298)
T d1i8ta1           1 MYDYIIVGS-GLFGAVCANELKKLNKKVLVIEKRNH   35 (298)
T ss_dssp             CEEEEEECC-SHHHHHHHHHHGGGTCCEEEECSSSS
T ss_pred             CccEEEECC-cHHHHHHHHHHHhCCCcEEEEECCCC
Confidence            346999997 99999999999999999999998753

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=91.89  E-value=0.099  Score=37.89  Aligned_cols=35  Identities=11%  Similarity=0.219  Sum_probs=29.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGR   91 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~   91 (286)
                      .++|+|.|| |++|..++..|.+.|.+|.++.+...
T Consensus         3 ~~~VvIIGg-G~~G~e~A~~l~~~g~~v~v~~~~~~   37 (185)
T d1q1ra1           3 NDNVVIVGT-GLAGVEVAFGLRASGWEGNIRLVGDA   37 (185)
T ss_dssp             SCEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred             CCCEEEECC-cHHHHHHHHHHHHcCCceEEEEecCc
Confidence            468999997 99999999999999988766655543

>d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Methanothermus fervidus [TaxId: 2180]

Probab=91.83  E-value=0.57  Score=33.74  Aligned_cols=97  Identities=15%  Similarity=0.229  Sum_probs=55.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCC-CeEEEEecCCCccc-ccccCCceeEEecc-----------CCCHhHHHHHhcCC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRG-LTVASLSRSGRSSL-RDSWANNVIWHQGN-----------LLSSDSWKEALDGV  122 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g-~~V~~l~R~~~~~~-~~~~~~~~~~i~~D-----------l~d~~~~~~~~~~~  122 (286)
                      |++|.|-| -|.||+.+++.|++++ .+|+++.-..+... ......+.......           +.-...+..+++++
T Consensus         1 M~~VgING-fGRIGR~v~R~l~~~~di~vvaInd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~g~~~~~~~~v   79 (171)
T d1cf2o1           1 MKAVAING-YGTVGKRVADAIAQQDDMKVIGVSKTRPDFEARMALKKGYDLYVAIPERVKLFEKAGIEVAGTVDDMLDEA   79 (171)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHHTSSSEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHTTCCCCEEHHHHHHTC
T ss_pred             CeEEEEEc-CcHHHHHHHHHHHhCCCceEEEEecCCcHHHHHHHHhcCCceEecccccceeecccCcccCCChhHhhcCC
Confidence            56899998 6999999999998886 57776664332211 00000111111111           11112355567789


Q ss_pred             CEEEEccccCCCcchhhhhhhHHHHHHHHHHHHcCCCEEEEEec
Q 023205          123 TAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISA  166 (286)
Q Consensus       123 d~vi~~a~~~~~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss  166 (286)
                      |+|+-|.|.+...            .-++.-.++|+ ++|+.|+
T Consensus        80 DvViEcTG~f~~~------------~~~~~hl~~G~-K~vi~~~  110 (171)
T d1cf2o1          80 DIVIDCTPEGIGA------------KNLKMYKEKGI-KAIFQGG  110 (171)
T ss_dssp             SEEEECCSTTHHH------------HHHHHHHHTTC-EEEECTT
T ss_pred             CEEEEccCCCCCH------------HHHHHHHHcCC-CEEEECC
Confidence            9999998875211            11333345676 5776666

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=91.54  E-value=0.11  Score=34.96  Aligned_cols=35  Identities=20%  Similarity=0.311  Sum_probs=28.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHH---CCCeEEEEecCCC
Q 023205           56 SEKLLVLGGNGFVGSHICREALD---RGLTVASLSRSGR   91 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~---~g~~V~~l~R~~~   91 (286)
                      +++++|.|| |++|..++..|.+   ++.+|+++.|.+.
T Consensus        20 p~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~~~~   57 (117)
T d1aoga2          20 PRRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYRGEM   57 (117)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEESSSS
T ss_pred             CCeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEeccch
Confidence            468999997 9999999976654   4568999998653

>d1w5fa1 c.32.1.1 (A:22-215) Cell-division protein FtsZ {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Thermotoga maritima [TaxId: 2336]

Probab=91.51  E-value=0.48  Score=34.93  Aligned_cols=100  Identities=19%  Similarity=0.229  Sum_probs=60.7

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCC---eEEEEecCCCcccccccCCceeEEeccC-------------------CCHhH
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGL---TVASLSRSGRSSLRDSWANNVIWHQGNL-------------------LSSDS  114 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~---~V~~l~R~~~~~~~~~~~~~~~~i~~Dl-------------------~d~~~  114 (286)
                      +||.|.|- |.-|..++..|.+.+.   +.++++-+... +. ......++..+.-                   .+.+.
T Consensus         1 ~kI~viGv-GGaG~n~v~~l~~~~~~~v~~iainTD~~~-L~-~~~a~~ki~iG~~~t~G~G~g~~p~~g~~aa~e~~~~   77 (194)
T d1w5fa1           1 LKIKVIGV-GGAGNNAINRMIEIGIHGVEFVAVNTDLQV-LE-ASNADVKIQIGENITRGLGAGGRPEIGEQAALESEEK   77 (194)
T ss_dssp             CCEEEEEE-HHHHHHHHHHHHHHCCTTEEEEEEESCHHH-HH-TCCCSEEEECCTTTTTTSCCTTCHHHHHHHHHHTHHH
T ss_pred             CeEEEEEe-CchHHHHHHHHHHcCCCceEEEEEcCCHHH-Hh-cCCcceEEecccccCCCcccccCchhhHhHHHHHHHH
Confidence            36889996 8899999999999764   44555544321 11 1111222322211                   23467


Q ss_pred             HHHHhcCCCEEEEccccCCCcchhhhhhhHHHHHHHHHHHHcCCCEEEEEe
Q 023205          115 WKEALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYIS  165 (286)
Q Consensus       115 ~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~S  165 (286)
                      +.+.++++|.||-+||.....-.      -++.-+.+.|++.++.-+-+++
T Consensus        78 I~~~l~~~d~vfi~AGlGGgTGt------gaapviA~~ake~g~lvv~ivt  122 (194)
T d1w5fa1          78 IREVLQDTHMVFITAGFGGGTGT------GASPVIAKIAKEMGILTVAIVT  122 (194)
T ss_dssp             HHHHTTTCSEEEEEEETTSSHHH------HHHHHHHHHHHHTTCEEEEEEE
T ss_pred             HHHHhcCCCeEEEEEecCCCccc------chHHHHHHHHHHcCCceEEEEe
Confidence            88889999999999987543211      2233568888888864333333

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=91.42  E-value=0.1  Score=41.25  Aligned_cols=32  Identities=25%  Similarity=0.692  Sum_probs=29.1

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCC
Q 023205           58 KLLVLGGNGFVGSHICREALDRGL-TVASLSRSG   90 (286)
Q Consensus        58 ~VlVtGatG~iG~~l~~~Ll~~g~-~V~~l~R~~   90 (286)
                      +|+|.|| |.+|..++.+|.++|+ +|.++.|+.
T Consensus         3 dViIIGa-Gi~G~s~A~~La~~G~~~V~liE~~~   35 (305)
T d1pj5a2           3 RIVIIGA-GIVGTNLADELVTRGWNNITVLDQGP   35 (305)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence            6999997 9999999999999996 699999874

>d1nhpa1 c.3.1.5 (A:1-119,A:243-321) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=91.42  E-value=0.11  Score=38.41  Aligned_cols=33  Identities=21%  Similarity=0.290  Sum_probs=28.4

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCC--CeEEEEecCC
Q 023205           57 EKLLVLGGNGFVGSHICREALDRG--LTVASLSRSG   90 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g--~~V~~l~R~~   90 (286)
                      |||+|.|| |++|..++..|.+.+  .+|+++.|+.
T Consensus         1 ~KVvIIGg-G~~G~e~A~~l~~~~~~~~V~v~~~~~   35 (198)
T d1nhpa1           1 MKVIVLGS-SHGGYEAVEELLNLHPDAEIQWYEKGD   35 (198)
T ss_dssp             CEEEEECS-SHHHHHHHHHHHHHCTTSEEEEEESSS
T ss_pred             CEEEEECC-cHHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence            68999997 999999999998864  5888888764

>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monooxygenase PhzS
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=91.21  E-value=0.16  Score=39.18  Aligned_cols=35  Identities=23%  Similarity=0.318  Sum_probs=30.8

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCCCc
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRS   92 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~-~V~~l~R~~~~   92 (286)
                      ++|+|.|| |..|..++..|.+.|. +|.++.|++..
T Consensus         2 ~~V~IvGa-G~aGl~~A~~L~~~Gi~~V~V~Er~~~~   37 (288)
T d3c96a1           2 IDILIAGA-GIGGLSCALALHQAGIGKVTLLESSSEI   37 (288)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESSSSC
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCeEEEEeCCCCC
Confidence            58999997 9999999999999995 89999987643

>d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Virulence factor MviM
species: Escherichia coli [TaxId: 562]

Probab=91.20  E-value=0.23  Score=35.47  Aligned_cols=67  Identities=13%  Similarity=0.016  Sum_probs=37.5

Q ss_pred             CeEEEEcCCChhHHH-HHHHHHHC-CCeEEEEe-cCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEcccc
Q 023205           57 EKLLVLGGNGFVGSH-ICREALDR-GLTVASLS-RSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG  131 (286)
Q Consensus        57 ~~VlVtGatG~iG~~-l~~~Ll~~-g~~V~~l~-R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~~  131 (286)
                      ++|.|.|. |.+|.. .+..|.+. +.+++++. ++++........-++     +..  +.++.+.+++|+|+-+..+
T Consensus         2 iri~iIG~-G~~g~~~~~~~l~~~~~~~i~~v~d~~~~~~~~~~~~~~~-----~~~--~~~~~l~~~~D~V~I~tp~   71 (164)
T d1tlta1           2 LRIGVVGL-GGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICESWRI-----PYA--DSLSSLAASCDAVFVHSST   71 (164)
T ss_dssp             EEEEEECC-STHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHHHHTC-----CBC--SSHHHHHTTCSEEEECSCT
T ss_pred             CEEEEEcC-CHHHHHHHHHHHHhCCCcEEEEEEechhHhhhhhhhcccc-----ccc--ccchhhhhhcccccccccc
Confidence            58999995 999975 45555554 46776655 444432111000112     122  2244556789999877543

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=91.19  E-value=0.059  Score=39.42  Aligned_cols=36  Identities=11%  Similarity=0.224  Sum_probs=30.5

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCc
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRS   92 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~   92 (286)
                      ..++|+|.|+ |..++.++..|.+.| +|+++.|+.++
T Consensus        17 ~~k~vlIlGa-GG~arai~~aL~~~~-~i~I~nR~~~k   52 (177)
T d1nvta1          17 KDKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTVEK   52 (177)
T ss_dssp             CSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSHHH
T ss_pred             CCCEEEEECC-cHHHHHHHHHHcccc-ceeeehhhhhH
Confidence            3579999996 889999999987666 99999998665

>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Crithidia fasciculata [TaxId: 5656]

Probab=91.06  E-value=0.17  Score=33.90  Aligned_cols=35  Identities=23%  Similarity=0.348  Sum_probs=28.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHH---CCCeEEEEecCCC
Q 023205           56 SEKLLVLGGNGFVGSHICREALD---RGLTVASLSRSGR   91 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~---~g~~V~~l~R~~~   91 (286)
                      +++++|.|| |++|-.++..|.+   .|.+|.++.|.+.
T Consensus        18 p~~v~IiGg-G~ig~E~A~~l~~~~~~g~~Vtli~~~~~   55 (117)
T d1feca2          18 PKRALCVGG-GYISIEFAGIFNAYKARGGQVDLAYRGDM   55 (117)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHHSCTTCEEEEEESSSS
T ss_pred             CCeEEEECC-ChHHHHHHHHhHhhcccccccceeccccc
Confidence            478999997 9999999976654   3789999998754

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=91.00  E-value=0.15  Score=37.43  Aligned_cols=37  Identities=16%  Similarity=0.191  Sum_probs=31.4

Q ss_pred             CCeEEE-EcCCChhHHHHHHHHHHCCCeEEEEecCCCc
Q 023205           56 SEKLLV-LGGNGFVGSHICREALDRGLTVASLSRSGRS   92 (286)
Q Consensus        56 ~~~VlV-tGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~   92 (286)
                      ..+|+| +||+|.+|...++.....|.+|++++|+.++
T Consensus        29 g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~   66 (189)
T d1gu7a2          29 GKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPN   66 (189)
T ss_dssp             TTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTT
T ss_pred             CCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccc
Confidence            345666 6999999999999988889999999988655

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=90.95  E-value=0.079  Score=40.51  Aligned_cols=69  Identities=12%  Similarity=0.090  Sum_probs=44.9

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHh-cCCCEEEEcccc
Q 023205           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEAL-DGVTAVISCVGG  131 (286)
Q Consensus        54 ~~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~-~~~d~vi~~a~~  131 (286)
                      ...++|+|-|- |.+|+++++.|.+.|.+|++.+.+...........+.+.+     +.+   +++ ..||+++-||-.
T Consensus        37 l~g~~v~IqG~-GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~~~g~~~~-----~~~---~~~~~~cDIl~PcA~~  106 (230)
T d1leha1          37 LEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEGADAV-----APN---AIYGVTCDIFAPCALG  106 (230)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCCEEC-----CGG---GTTTCCCSEEEECSCS
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEeecccHHHHHHHHHhcCCccc-----CCc---ccccccccEecccccc
Confidence            34689999995 9999999999999999999877654321110001122211     222   222 369999999864

>d1np3a2 c.2.1.6 (A:1-182) Class I ketol-acid reductoisomerase (KARI) {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Class I ketol-acid reductoisomerase (KARI)
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=90.66  E-value=0.2  Score=36.25  Aligned_cols=66  Identities=21%  Similarity=0.235  Sum_probs=52.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcccccccCCceeEEeccCCCHhHHHHHhcCCCEEEEccc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVG  130 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~d~vi~~a~  130 (286)
                      .++|.|.|= |..|++=+.-|.++|.+|++-.|..++.......+++++.        ++.++.+.+|+|..+..
T Consensus        16 ~k~IaViGY-GsQG~AhAlNLrDSG~~V~VGLr~gs~s~~~A~~~Gf~v~--------~~~eA~~~aDiim~L~P   81 (182)
T d1np3a2          16 GKKVAIIGY-GSQGHAHACNLKDSGVDVTVGLRSGSATVAKAEAHGLKVA--------DVKTAVAAADVVMILTP   81 (182)
T ss_dssp             TSCEEEECC-SHHHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHTTCEEE--------CHHHHHHTCSEEEECSC
T ss_pred             CCEEEEEee-CcHhHHHHhhhhhcCCCEEEEcCCCCccHHHHhhhccccc--------cHHHHhhhcCeeeeecc
Confidence            578999996 9999999999999999999999987654443334555543        36688899999998864

>d1xhca1 c.3.1.5 (A:1-103,A:226-289) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=90.63  E-value=0.14  Score=36.42  Aligned_cols=31  Identities=16%  Similarity=0.374  Sum_probs=26.9

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCeEEEEecCC
Q 023205           58 KLLVLGGNGFVGSHICREALDRGLTVASLSRSG   90 (286)
Q Consensus        58 ~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~   90 (286)
                      ||+|.|| |++|..++..|. ++.+|+++.|.+
T Consensus         2 rVvIIGg-G~~G~e~A~~l~-~~~~Vtvv~~~~   32 (167)
T d1xhca1           2 KVVIVGN-GPGGFELAKQLS-QTYEVTVIDKEP   32 (167)
T ss_dssp             EEEEECC-SHHHHHHHHHHT-TTSEEEEECSSS
T ss_pred             eEEEECC-cHHHHHHHHHHH-cCCCEEEEeccc
Confidence            7999997 999999999885 578999998764

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=90.62  E-value=0.43  Score=34.22  Aligned_cols=75  Identities=16%  Similarity=0.169  Sum_probs=43.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCCCcccccccCCceeEEecc-CCC-HhHHHHHh--cCCCEEEEccc
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSLRDSWANNVIWHQGN-LLS-SDSWKEAL--DGVTAVISCVG  130 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~~~~~~~~~~~i~~D-l~d-~~~~~~~~--~~~d~vi~~a~  130 (286)
                      ..+|+|.|+ |.+|...+..+...+. +|++.++++++........--+++..+ -.+ .+.+.+..  .++|++|.+.|
T Consensus        29 g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~~~GAd~~in~~~~~~~~~~~~~~~~~~G~d~vid~~G  107 (175)
T d1cdoa2          29 GSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNPNDHSEPISQVLSKMTNGGVDFSLECVG  107 (175)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCEEECGGGCSSCHHHHHHHHHTSCBSEEEECSC
T ss_pred             CCEEEEEec-CCccchHHHHHHHHhhchheeecchHHHHHHHHHcCCcEEEcCCCcchhHHHHHHhhccCCcceeeeecC
Confidence            568999996 6678888888887764 788888876653211111112233211 111 12333332  36888888876


Q ss_pred             c
Q 023205          131 G  131 (286)
Q Consensus       131 ~  131 (286)
                      .
T Consensus       108 ~  108 (175)
T d1cdoa2         108 N  108 (175)
T ss_dssp             C
T ss_pred             C
Confidence            5

>d1fmta2 c.65.1.1 (A:1-206) Methionyl-tRNAfmet formyltransferase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: Methionyl-tRNAfmet formyltransferase
species: Escherichia coli [TaxId: 562]

Probab=90.44  E-value=0.84  Score=33.75  Aligned_cols=76  Identities=11%  Similarity=0.070  Sum_probs=48.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCccccc------------ccCCceeEEeccCCCHhHHHHHhc--C
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRD------------SWANNVIWHQGNLLSSDSWKEALD--G  121 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~------------~~~~~~~~i~~Dl~d~~~~~~~~~--~  121 (286)
                      .|+|+++|. +..+..+++.|++.|++|.++.-.+++....            ....++.+...+..+.+...+.++  +
T Consensus         3 ~mKI~f~G~-~~~~~~~L~~L~~~~~~i~~Vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (206)
T d1fmta2           3 SLRIIFAGT-PDFAARHLDALLSSGHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGLPVFQPVSLRPQENQQLVAELQ   81 (206)
T ss_dssp             CCEEEEEEC-SHHHHHHHHHHHHTTCEEEEEECCCCBC------CBCCHHHHHHHHTTCCEECCSCSCSHHHHHHHHHTT
T ss_pred             CcEEEEECC-CHHHHHHHHHHHhCCCCEEEEEeCCCcccccCccccccchhhhhhccCccccccccccchhhHHHHhhhc
Confidence            578999985 7889999999999999988766544321110            001345555555555555555554  4


Q ss_pred             CCEEEEccccC
Q 023205          122 VTAVISCVGGF  132 (286)
Q Consensus       122 ~d~vi~~a~~~  132 (286)
                      +|.++.+.+..
T Consensus        82 ~d~~v~~~~~~   92 (206)
T d1fmta2          82 ADVMVVVAYGL   92 (206)
T ss_dssp             CSEEEEESCCS
T ss_pred             ceEEEeecccc
Confidence            78888776653

>d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=90.42  E-value=0.024  Score=43.37  Aligned_cols=26  Identities=23%  Similarity=0.387  Sum_probs=23.4

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCeE
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGLTV   83 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~~V   83 (286)
                      |+|+|.|| |-+|..++.+|+++|++|
T Consensus         1 mkV~VIGa-Gi~GlstA~~L~~~G~~v   26 (246)
T d1kifa1           1 MRVVVIGA-GVIGLSTALCIHERYHSV   26 (246)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHHTTT
T ss_pred             CEEEEECc-hHHHHHHHHHHHHCCCCc
Confidence            58999997 999999999999998753

>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=90.28  E-value=0.16  Score=40.31  Aligned_cols=35  Identities=26%  Similarity=0.410  Sum_probs=31.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCC
Q 023205           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGR   91 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~   91 (286)
                      .-.|+|+|| |..|-.++.+|.+.|.+|+++.+.++
T Consensus         7 ~~dV~IIGA-G~sGl~~a~~L~~~G~~v~i~Ek~~~   41 (298)
T d1w4xa1           7 EVDVLVVGA-GFSGLYALYRLRELGRSVHVIETAGD   41 (298)
T ss_dssp             EEEEEEECC-SHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred             CCCEEEECc-cHHHHHHHHHHHhCCCCEEEEEcCCC
Confidence            346999997 99999999999999999999998753

>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

Probab=90.21  E-value=0.15  Score=38.70  Aligned_cols=32  Identities=19%  Similarity=0.484  Sum_probs=29.1

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCC
Q 023205           58 KLLVLGGNGFVGSHICREALDRGL-TVASLSRSG   90 (286)
Q Consensus        58 ~VlVtGatG~iG~~l~~~Ll~~g~-~V~~l~R~~   90 (286)
                      +|+|.|| |.-|...+..|.++|+ +|+++.++.
T Consensus         2 ~V~IIGa-G~aGL~aA~~L~~~G~~~V~vlE~~~   34 (347)
T d1b5qa1           2 RVIVVGA-GMSGISAAKRLSEAGITDLLILEATD   34 (347)
T ss_dssp             CEEEECC-BHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred             CEEEECC-cHHHHHHHHHHHhCCCCcEEEEECCC
Confidence            6999997 9999999999999996 799999875

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=89.80  E-value=1.1  Score=34.04  Aligned_cols=35  Identities=20%  Similarity=0.167  Sum_probs=30.4

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecC
Q 023205           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRS   89 (286)
Q Consensus        54 ~~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~   89 (286)
                      ...++|+|-| -|.+|+++++.|.+.|.+|++++-.
T Consensus        29 l~g~~v~IqG-fGnVG~~~a~~L~~~Gakvv~vsD~   63 (242)
T d1v9la1          29 IEGKTVAIQG-MGNVGRWTAYWLEKMGAKVIAVSDI   63 (242)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEECS
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEeecc
Confidence            3467999999 5999999999999999999987744

>d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 3
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=89.58  E-value=0.5  Score=33.32  Aligned_cols=36  Identities=28%  Similarity=0.279  Sum_probs=30.2

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCCC
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGR   91 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g~-~V~~l~R~~~   91 (286)
                      ..++|+|.|| |.+|...+..+++.|. .|+++.|...
T Consensus        44 ~~~kVvVIGG-GdtA~D~A~~a~r~GA~~V~vi~rr~~   80 (153)
T d1gtea3          44 IRGAVIVLGA-GDTAFDCATSALRCGARRVFLVFRKGF   80 (153)
T ss_dssp             CCSEEEEECS-SHHHHHHHHHHHHTTCSEEEEECSSCG
T ss_pred             CCCEEEEECC-ChhHHHHHHHHHHcCCcceeEEEeCCh
Confidence            3568999997 9999999999999985 5888888653

>d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Apoptosis-inducing factor (AIF)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.44  E-value=0.25  Score=34.20  Aligned_cols=35  Identities=26%  Similarity=0.429  Sum_probs=29.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHH----CCCeEEEEecCCC
Q 023205           56 SEKLLVLGGNGFVGSHICREALD----RGLTVASLSRSGR   91 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~~Ll~----~g~~V~~l~R~~~   91 (286)
                      .++++|.|| |++|..++..|..    .|.+|+.+.+.+.
T Consensus        37 ~k~i~IvGg-G~~G~E~A~~l~~~~~~~g~~Vt~i~~~~~   75 (137)
T d1m6ia2          37 VKSITIIGG-GFLGSELACALGRKARALGTEVIQLFPEKG   75 (137)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHHHHhcCCEEEEeccccc
Confidence            468999997 9999999998853    4789999988754

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=89.37  E-value=0.34  Score=34.11  Aligned_cols=36  Identities=14%  Similarity=0.266  Sum_probs=29.8

Q ss_pred             CCeEEEE-cCCChhHHHHHHHHHHCCCeEEEEecCCC
Q 023205           56 SEKLLVL-GGNGFVGSHICREALDRGLTVASLSRSGR   91 (286)
Q Consensus        56 ~~~VlVt-GatG~iG~~l~~~Ll~~g~~V~~l~R~~~   91 (286)
                      .+.|+|. .+.||+|..++..|.+.|.+|+++.+.+.
T Consensus        39 ~~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~~   75 (156)
T d1djqa2          39 GKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVHL   75 (156)
T ss_dssp             CSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSCT
T ss_pred             CCceEEEecCCChHHHHHHHHHHHcCCeEEEEecCCc
Confidence            4566665 24599999999999999999999998753

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=89.19  E-value=1.3  Score=31.67  Aligned_cols=71  Identities=18%  Similarity=0.126  Sum_probs=43.5

Q ss_pred             CCeEEEEcCCChhHHH-HHHHHHHCC-----CeEEEEecCCCcccc---------cccCCceeEEeccCCCHhHHHHHhc
Q 023205           56 SEKLLVLGGNGFVGSH-ICREALDRG-----LTVASLSRSGRSSLR---------DSWANNVIWHQGNLLSSDSWKEALD  120 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~-l~~~Ll~~g-----~~V~~l~R~~~~~~~---------~~~~~~~~~i~~Dl~d~~~~~~~~~  120 (286)
                      ..||.|.|| |.+|.. ++..|+.+-     .++.+.+.++++...         .......++...     .+.+++++
T Consensus         3 ~~KI~iIGa-Gsv~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~eal~   76 (167)
T d1u8xx1           3 SFSIVIAGG-GSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAAT-----TDPEEAFT   76 (167)
T ss_dssp             CEEEEEECT-TSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEE-----SCHHHHHS
T ss_pred             CceEEEECC-ChhhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceEec-----CChhhccC
Confidence            347999998 556654 445555532     378888887655211         001122333321     23667899


Q ss_pred             CCCEEEEccccC
Q 023205          121 GVTAVISCVGGF  132 (286)
Q Consensus       121 ~~d~vi~~a~~~  132 (286)
                      ++|+||..++..
T Consensus        77 ~AD~Vvitag~~   88 (167)
T d1u8xx1          77 DVDFVMAHIRVG   88 (167)
T ss_dssp             SCSEEEECCCTT
T ss_pred             CCCEEEECCCcC
Confidence            999999999875

>d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Probable oxidoreductase At4g09670
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=88.49  E-value=0.19  Score=36.70  Aligned_cols=67  Identities=15%  Similarity=0.147  Sum_probs=39.9

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHC-CCeEEEE-ecCCCcccc--cc--cCCceeEEeccCCCHhHHHHHh--cCCCEEEEc
Q 023205           57 EKLLVLGGNGFVGSHICREALDR-GLTVASL-SRSGRSSLR--DS--WANNVIWHQGNLLSSDSWKEAL--DGVTAVISC  128 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~-g~~V~~l-~R~~~~~~~--~~--~~~~~~~i~~Dl~d~~~~~~~~--~~~d~vi~~  128 (286)
                      .+|.|.|+ |.+|+..++.|... +.+|+++ ++++++...  +.  .....++    ..|   +++++  .++|+|+-+
T Consensus         2 iki~iIG~-G~~g~~~~~~l~~~~~~~i~ai~d~~~~~~~~~~~~~~~~~~~~~----~~~---~~~ll~~~~iD~v~I~   73 (184)
T d1ydwa1           2 IRIGVMGC-ADIARKVSRAIHLAPNATISGVASRSLEKAKAFATANNYPESTKI----HGS---YESLLEDPEIDALYVP   73 (184)
T ss_dssp             EEEEEESC-CTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCCTTCEE----ESS---HHHHHHCTTCCEEEEC
T ss_pred             eEEEEEcC-CHHHHHHHHHHHhCCCCEEEEEEeCCccccccchhccccccceee----cCc---HHHhhhccccceeeec
Confidence            47999995 89999999999876 4677765 454332111  11  1112222    123   44454  368999977


Q ss_pred             ccc
Q 023205          129 VGG  131 (286)
Q Consensus       129 a~~  131 (286)
                      ..+
T Consensus        74 tp~   76 (184)
T d1ydwa1          74 LPT   76 (184)
T ss_dssp             CCG
T ss_pred             ccc
Confidence            544

>d2g82a1 c.2.1.3 (A:1-148,A:311-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Thermus aquaticus [TaxId: 271]

Probab=88.45  E-value=0.88  Score=32.56  Aligned_cols=93  Identities=22%  Similarity=0.269  Sum_probs=56.8

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcc----------cccccC--------------CceeEEeccCCCH
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSS----------LRDSWA--------------NNVIWHQGNLLSS  112 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~----------~~~~~~--------------~~~~~i~~Dl~d~  112 (286)
                      ++|.|=| =|.||+.+++.|.+++.+|.++.--.+..          ....+.              ..+.+.  .-.|+
T Consensus         1 ikigING-fGRIGR~~~R~l~~~~i~iv~INd~~~~~~~ayLl~yDS~hG~~~~~v~~~~~~l~i~g~~I~~~--~~~~p   77 (168)
T d2g82a1           1 MKVGING-FGRIGRQVFRILHSRGVEVALINDLTDNKTLAHLLKYDSIYHRFPGEVAYDDQYLYVDGKAIRAT--AVKDP   77 (168)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHTCCEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEECSSEEEETTEEEEEE--CCSSG
T ss_pred             CEEEEEC-CcHHHHHHHHHHhcCCCEEEEECCCcchhhhhheeecccccCccccccccccceeEecceeEEEE--ecCCh
Confidence            4788888 49999999999999999988877432110          000001              112222  22355


Q ss_pred             hHHHHHhcCCCEEEEccccCCCcchhhhhhhHHHHHHHHHHHHcCCCEEEEE
Q 023205          113 DSWKEALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYI  164 (286)
Q Consensus       113 ~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~  164 (286)
                      +++.=.-.++|+|+-|.|.+.....            ++.-.+.|+|++|..
T Consensus        78 ~~i~W~~~gvdiViEcTG~f~~~~~------------~~~hl~~gakkViiS  117 (168)
T d2g82a1          78 KEIPWAEAGVGVVIESTGVFTDADK------------AKAHLEGGAKKVIIT  117 (168)
T ss_dssp             GGCCTGGGTEEEEEECSSSCCBHHH------------HTHHHHTTCSEEEES
T ss_pred             HHCcccccCCceeEeccccccchHH------------hhhhhccccceeeec
Confidence            5544334578999999887644322            223335689988873

>d1ofua1 c.32.1.1 (A:11-208) Cell-division protein FtsZ {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=88.36  E-value=1.8  Score=31.69  Aligned_cols=98  Identities=16%  Similarity=0.178  Sum_probs=60.3

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC---eEEEEecCCCcccccccCCceeEEecc-----------C--------CCHhHH
Q 023205           58 KLLVLGGNGFVGSHICREALDRGL---TVASLSRSGRSSLRDSWANNVIWHQGN-----------L--------LSSDSW  115 (286)
Q Consensus        58 ~VlVtGatG~iG~~l~~~Ll~~g~---~V~~l~R~~~~~~~~~~~~~~~~i~~D-----------l--------~d~~~~  115 (286)
                      +|.|.|- |..|..++..|.+.+.   +.++++-+..... . .....++..++           .        .+.+.+
T Consensus         3 ~IkViGv-GGaG~n~v~~~~~~~~~~v~~iainTD~~~L~-~-~~~~~ki~iG~~~~~g~G~gg~p~~g~~aa~e~~~~I   79 (198)
T d1ofua1           3 VIKVIGV-GGGGGNAVNHMAKNNVEGVEFICANTDAQALK-N-IAARTVLQLGPGVTKGLGAGANPEVGRQAALEDRERI   79 (198)
T ss_dssp             CEEEEEE-HHHHHHHHHHHHHTTCCSEEEEEEESBTGGGS-S-CSCSEEEECCHHHHTTBCCCSCHHHHHHHHHHTHHHH
T ss_pred             eEEEEEE-CchHHHHHHHHHHcCCCCeEEEEEeCcHHHHh-c-CCccceeccccccccCCCCCCChHHHHHHHHHHHHHH
Confidence            4778885 8889999999999874   5566665543211 1 11122222221           1        245668


Q ss_pred             HHHhcCCCEEEEccccCCCcchhhhhhhHHHHHHHHHHHHcCCCEEEEE
Q 023205          116 KEALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYI  164 (286)
Q Consensus       116 ~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~  164 (286)
                      .+.++++|.||-+||.....-.      -++.-+.+.|++.++--+-++
T Consensus        80 ~~~l~~~d~vfi~AGlGGGTGt------gaapviA~~ake~g~lvvaiv  122 (198)
T d1ofua1          80 SEVLEGADMVFITTGMGGGTGT------GAAPIIAEVAKEMGILTVAVV  122 (198)
T ss_dssp             HHHHTTCSEEEEEEETTSSHHH------HHHHHHHHHHHHTTCEEEEEE
T ss_pred             HHHhCCCCeEEEEecCCCCccc------cHHHHHHHHHHHcCCCEEEEE
Confidence            8889999999999987543321      223346888888886433333

>d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative oxidoreductase VCA1048
species: Vibrio cholerae [TaxId: 666]

Probab=88.19  E-value=0.21  Score=35.73  Aligned_cols=34  Identities=12%  Similarity=0.145  Sum_probs=22.5

Q ss_pred             CeEEEEcCCChhHHH-HHHHHHHCC-CeEEEEecCCC
Q 023205           57 EKLLVLGGNGFVGSH-ICREALDRG-LTVASLSRSGR   91 (286)
Q Consensus        57 ~~VlVtGatG~iG~~-l~~~Ll~~g-~~V~~l~R~~~   91 (286)
                      ++|.|.|+ |.+|.. .+..|.+.+ .++.+.+++++
T Consensus         2 irvgiiG~-G~~~~~~~~~~l~~~~~~~~~~~d~~~~   37 (167)
T d1xeaa1           2 LKIAMIGL-GDIAQKAYLPVLAQWPDIELVLCTRNPK   37 (167)
T ss_dssp             EEEEEECC-CHHHHHTHHHHHTTSTTEEEEEECSCHH
T ss_pred             eEEEEEcC-CHHHHHHHHHHHHhCCCcEEEEEECCHH
Confidence            58999996 888866 455555543 46666666543

>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monoamine oxidase B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.84  E-value=0.29  Score=38.93  Aligned_cols=31  Identities=32%  Similarity=0.550  Sum_probs=28.7

Q ss_pred             EEEEcCCChhHHHHHHHHHHCCCeEEEEecCC
Q 023205           59 LLVLGGNGFVGSHICREALDRGLTVASLSRSG   90 (286)
Q Consensus        59 VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~   90 (286)
                      |+|.|| |..|-..+..|.++|++|+++.++.
T Consensus         2 ViVIGa-G~aGL~aA~~L~~~G~~V~VlE~~~   32 (383)
T d2v5za1           2 VVVVGG-GISGMAAAKLLHDSGLNVVVLEARD   32 (383)
T ss_dssp             EEEECC-BHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred             EEEECC-CHHHHHHHHHHHhCCCCEEEEecCC
Confidence            789996 9999999999999999999999765

>d1k3ta1 c.2.1.3 (A:1-164,A:334-359) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=87.71  E-value=3  Score=30.27  Aligned_cols=33  Identities=18%  Similarity=0.295  Sum_probs=26.2

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCC-----CeEEEEec
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDRG-----LTVASLSR   88 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~g-----~~V~~l~R   88 (286)
                      |.++|.|=| =|-||+.+++.+++++     .+|+++.-
T Consensus         1 M~ikigING-FGRIGR~vlR~~~~~~~~~~~i~iv~Ind   38 (190)
T d1k3ta1           1 MPIKVGING-FGRIGRMVFQALCEDGLLGTEIDVVAVVD   38 (190)
T ss_dssp             CCEEEEEEC-CSHHHHHHHHHHHHTTCBTTTEEEEEEEE
T ss_pred             CCeEEEEEC-CChHHHHHHHHHHHcCCCCCCeEEEEEec
Confidence            467899999 6999999999999875     25666553

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=87.53  E-value=0.33  Score=36.84  Aligned_cols=33  Identities=27%  Similarity=0.476  Sum_probs=29.9

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCC
Q 023205           58 KLLVLGGNGFVGSHICREALDRGLTVASLSRSGR   91 (286)
Q Consensus        58 ~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~   91 (286)
                      -|+|.|| |..|...+..|.++|++|.++.+++.
T Consensus         4 DViIIGa-G~aGl~aA~~la~~G~~V~liEk~~~   36 (251)
T d2i0za1           4 DVIVIGG-GPSGLMAAIGAAEEGANVLLLDKGNK   36 (251)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            3899997 99999999999999999999998754

>d1n4wa1 c.3.1.2 (A:9-318,A:451-507) Cholesterol oxidase of GMC family {Streptomyces sp. [TaxId: 1931]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Cholesterol oxidase of GMC family
species: Streptomyces sp. [TaxId: 1931]

Probab=87.32  E-value=0.3  Score=39.53  Aligned_cols=30  Identities=17%  Similarity=0.251  Sum_probs=28.0

Q ss_pred             EEEEcCCChhHHHHHHHHHHCCCeEEEEecC
Q 023205           59 LLVLGGNGFVGSHICREALDRGLTVASLSRS   89 (286)
Q Consensus        59 VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~   89 (286)
                      |+|.|+ |+-|..++.+|.++|++|.+|-|-
T Consensus         5 VIVVGs-G~aG~v~A~rLaeaG~~VlvLEaG   34 (367)
T d1n4wa1           5 AVVIGT-GYGAAVSALRLGEAGVQTLMLEMG   34 (367)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             EEEeCc-CHHHHHHHHHHHHCcCeEEEEecC
Confidence            789995 999999999999999999999984

>d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: Amyloid beta precursor protein-binding protein 1, APPBP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.23  E-value=1  Score=38.60  Aligned_cols=97  Identities=7%  Similarity=0.065  Sum_probs=58.3

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCCCccc----------c--------------cccCC--ceeEEeccC
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSL----------R--------------DSWAN--NVIWHQGNL  109 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~----------~--------------~~~~~--~~~~i~~Dl  109 (286)
                      .+|+|.|+ |.+|..+++.|...|. ++++++.+.-...          .              ....+  +++.+..++
T Consensus        26 s~VlvvG~-gglG~Ei~knLvl~GVg~itivD~d~v~~sdL~rqf~~~~~diGk~ka~~~~~~L~~lNp~v~i~~~~~~~  104 (529)
T d1yova1          26 AHVCLINA-TATGTEILKNLVLPGIGSFTIIDGNQVSGEDAGNNFFLQRSSIGKNRAEAAMEFLQELNSDVSGSFVEESP  104 (529)
T ss_dssp             CEEEECCC-SHHHHHHHHHHHTTTCSEEEEECCSBCCHHHHHHCTTCCGGGTTSBHHHHHHHHHHTTCTTSBCCEESSCH
T ss_pred             CCEEEECC-CHHHHHHHHHHHHhcCCEEEEEcCCcCChhhcCchhcCChhhCCCHHHHHHHHHHHHhCCCCcEEEEcCCc
Confidence            48999997 8899999999999995 7777765431100          0              01122  334444332


Q ss_pred             CCH-hHHHHHhcCCCEEEEccccCCCcchhhhhhhHHHHHHHHHHHHcCCCEEEEEec
Q 023205          110 LSS-DSWKEALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISA  166 (286)
Q Consensus       110 ~d~-~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss  166 (286)
                      .+. +.-...+.++|+||.+...           ......+-+.|++.+++ +|.+.+
T Consensus       105 ~~~~~~~~~~~~~~dvVv~~~~~-----------~~~~~~l~~~c~~~~ip-~i~~~~  150 (529)
T d1yova1         105 ENLLDNDPSFFCRFTVVVATQLP-----------ESTSLRLADVLWNSQIP-LLICRT  150 (529)
T ss_dssp             HHHHHSCGGGGGGCSEEEEESCC-----------HHHHHHHHHHHHHHTCC-EEEEEE
T ss_pred             hhhhhhHHHHhcCCCEEEECCCC-----------HHHHHHHHHHHHHcCCC-EEEEec
Confidence            211 1112456788999977421           12233567788888874 666665

>d1rq2a1 c.32.1.1 (A:8-205) Cell-division protein FtsZ {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=87.07  E-value=1.8  Score=31.80  Aligned_cols=100  Identities=18%  Similarity=0.200  Sum_probs=59.8

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC---eEEEEecCCCcccccccCCceeEEec-----------cC--------CCHhHH
Q 023205           58 KLLVLGGNGFVGSHICREALDRGL---TVASLSRSGRSSLRDSWANNVIWHQG-----------NL--------LSSDSW  115 (286)
Q Consensus        58 ~VlVtGatG~iG~~l~~~Ll~~g~---~V~~l~R~~~~~~~~~~~~~~~~i~~-----------Dl--------~d~~~~  115 (286)
                      +|-|.|- |..|..++.++.+++.   +.++++-+... + .......++..+           |.        .+.+.+
T Consensus         3 ~IkViGv-GGaG~n~vn~~~~~~~~~v~~iainTD~~~-L-~~~~~~~ki~iG~~~t~G~Gagg~p~~g~~aa~e~~~~I   79 (198)
T d1rq2a1           3 VIKVVGI-GGGGVNAVNRMIEQGLKGVEFIAINTDAQA-L-LMSDADVKLDVGRDSTRGLGAGADPEVGRKAAEDAKDEI   79 (198)
T ss_dssp             CEEEEEE-HHHHHHHHHHHHHTTCCSEEEEEEESCHHH-H-HHCCCSEEEECCTTTC-----CCCHHHHHHHHHHTHHHH
T ss_pred             eEEEEEe-CchHHHHHHHHHHcCCCCceEEEEcchHHH-H-hcCCcchhhccccccccCCCcCcChhhhHhhHHHHHHHH
Confidence            4667775 7779999999999874   45555544211 1 111112222222           11        245678


Q ss_pred             HHHhcCCCEEEEccccCCCcchhhhhhhHHHHHHHHHHHHcCCCEEEEEec
Q 023205          116 KEALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISA  166 (286)
Q Consensus       116 ~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~Ss  166 (286)
                      .+.++++|.||-+||.....-.      -++.-+.+.|++.++-.+-+++-
T Consensus        80 ~~~l~~~d~vfi~AGlGGgTGt------GaaPviA~iake~g~l~v~ivt~  124 (198)
T d1rq2a1          80 EELLRGADMVFVTAGEGGGTGT------GGAPVVASIARKLGALTVGVVTR  124 (198)
T ss_dssp             HHHHTTCSEEEEEEETTSSHHH------HHHHHHHHHHHHHTCEEEEEEEE
T ss_pred             HHHhcCCCEEEEEEecCCCCCc------chHHHHHHHHHHcCCcEEEEEec
Confidence            8889999999999987543321      22335688888888644444443

>d1gtma1 c.2.1.7 (A:181-419) Glutamate dehydrogenase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=85.86  E-value=2.1  Score=32.41  Aligned_cols=35  Identities=20%  Similarity=0.321  Sum_probs=28.9

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHC-CCeEEEEecC
Q 023205           54 PPSEKLLVLGGNGFVGSHICREALDR-GLTVASLSRS   89 (286)
Q Consensus        54 ~~~~~VlVtGatG~iG~~l~~~Ll~~-g~~V~~l~R~   89 (286)
                      ...++|+|-|- |.+|+++++.|.+. |..|+++.-.
T Consensus        30 l~g~~v~IqGf-GnVG~~~a~~L~~~~G~kvv~vsD~   65 (239)
T d1gtma1          30 LKGKTIAIQGY-GNAGYYLAKIMSEDFGMKVVAVSDS   65 (239)
T ss_dssp             STTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEEECS
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHHhcCcceeecccc
Confidence            45689999996 99999999999875 8888877643

>d1hdgo1 c.2.1.3 (O:1-148,O:313-331) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Thermotoga maritima [TaxId: 2336]

Probab=85.70  E-value=3.3  Score=29.42  Aligned_cols=91  Identities=15%  Similarity=0.228  Sum_probs=52.3

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCC---CeEEEEecCCCcc----------cccccC--------------CceeEEeccCC
Q 023205           58 KLLVLGGNGFVGSHICREALDRG---LTVASLSRSGRSS----------LRDSWA--------------NNVIWHQGNLL  110 (286)
Q Consensus        58 ~VlVtGatG~iG~~l~~~Ll~~g---~~V~~l~R~~~~~----------~~~~~~--------------~~~~~i~~Dl~  110 (286)
                      ||.|=| =|.||+.+++.++++.   .+|+++.-..+..          ....+.              .++.+.  .-.
T Consensus         2 kIgING-fGRIGR~v~R~~~~~~~~~i~vvaINd~~~~e~~ayLlkyDS~hG~~~~~v~~~~~~l~ing~~I~~~--~~~   78 (169)
T d1hdgo1           2 RVAING-FGRIGRLVYRIIYERKNPDIEVVAINDLTDTKTLAHLLKYDSVHKKFPGKVEYTENSLIVDGKEIKVF--AEP   78 (169)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHHTCTTCEEEEEECSSCHHHHHHHHHCCTTTCCCSSCEEECSSEEEETTEEEEEE--CCS
T ss_pred             EEEEEC-CChHHHHHHHHHHhccCCCEEEEEeccCccHHHHHHHHhccccccccCceEEEECCEEEECCEEEEEE--eCC
Confidence            688888 6999999999999743   5777775322110          000111              122222  123


Q ss_pred             CHhHHHHHhcCCCEEEEccccCCCcchhhhhhhHHHHHHHHHHHHcCCCEEEE
Q 023205          111 SSDSWKEALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVY  163 (286)
Q Consensus       111 d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~  163 (286)
                      +++++.=.-.++|+|+-|.|.+.....            ++.--+.|+|++|+
T Consensus        79 ~p~~i~W~~~gvD~ViEcTG~f~t~~~------------~~~hl~~GakkVii  119 (169)
T d1hdgo1          79 DPSKLPWKDLGVDFVIESTGVFRNREK------------AELHLQAGAKKVII  119 (169)
T ss_dssp             SGGGSCHHHHTCCEEEECSSSCCBHHH------------HTHHHHTTCSEEEE
T ss_pred             ChhhCCccccCCCEEEEecceeccccc------------hhhhccCCCceEEE
Confidence            444432112379999999988654322            22223468998887

>d1wg8a2 c.66.1.23 (A:5-108,A:207-284) TM0872, methyltransferase domain {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermus thermophilus [TaxId: 274]

Probab=85.62  E-value=1  Score=32.70  Aligned_cols=73  Identities=19%  Similarity=0.176  Sum_probs=49.0

Q ss_pred             EEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCcc--cccccCCceeEEeccCCCHhHHHHH--hcCCCEEEEccccCC
Q 023205           59 LLVLGGNGFVGSHICREALDRGLTVASLSRSGRSS--LRDSWANNVIWHQGNLLSSDSWKEA--LDGVTAVISCVGGFG  133 (286)
Q Consensus        59 VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~--~~~~~~~~~~~i~~Dl~d~~~~~~~--~~~~d~vi~~a~~~~  133 (286)
                      ++|=+ |=+-|.|. +.+++++.+|++++|++...  ......+++.+++++..+.+.....  .+.+|.|+.-.|..+
T Consensus        21 ~~vD~-T~G~GGhs-~~iL~~~~~viaiD~D~~ai~~a~~~~~~~~~~~~~~f~~~~~~l~~~~~~~vdgIl~DLGvSs   97 (182)
T d1wg8a2          21 VYVDA-TLGGAGHA-RGILERGGRVIGLDQDPEAVARAKGLHLPGLTVVQGNFRHLKRHLAALGVERVDGILADLGVSS   97 (182)
T ss_dssp             EEEET-TCTTSHHH-HHHHHTTCEEEEEESCHHHHHHHHHTCCTTEEEEESCGGGHHHHHHHTTCSCEEEEEEECSCCH
T ss_pred             EEEEe-CCCCcHHH-HHHhcccCcEEEEhhhhhHHHHHhhccccceeEeehHHHHHHHHHHHcCCCccCEEEEEccCCH
Confidence            34433 33334464 66677777999999998652  1223457899999999886655433  356899998888764

>d1lc0a1 c.2.1.3 (A:2-128,A:247-291) Biliverdin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Biliverdin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=85.34  E-value=0.92  Score=32.33  Aligned_cols=24  Identities=29%  Similarity=0.278  Sum_probs=19.3

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHC
Q 023205           55 PSEKLLVLGGNGFVGSHICREALDR   79 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~~   79 (286)
                      .+.+|.|.|. |.+|+..++.|.+.
T Consensus         6 ~k~kv~iIG~-G~~g~~h~~~l~~~   29 (172)
T d1lc0a1           6 GKFGVVVVGV-GRAGSVRLRDLKDP   29 (172)
T ss_dssp             CSEEEEEECC-SHHHHHHHHHHTSH
T ss_pred             CCcEEEEEcC-CHHHHHHHHHHHhC
Confidence            3568999996 99999988877654

>d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermotoga maritima [TaxId: 2336]

Probab=85.15  E-value=0.68  Score=33.99  Aligned_cols=71  Identities=11%  Similarity=0.125  Sum_probs=49.5

Q ss_pred             EEcCCChhHHHHHHHHHHCCCeEEEEecCCCccc-----ccccCCceeEEeccCCCHhHHHHH--hcCCCEEEEccccCC
Q 023205           61 VLGGNGFVGSHICREALDRGLTVASLSRSGRSSL-----RDSWANNVIWHQGNLLSSDSWKEA--LDGVTAVISCVGGFG  133 (286)
Q Consensus        61 VtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~-----~~~~~~~~~~i~~Dl~d~~~~~~~--~~~~d~vi~~a~~~~  133 (286)
                      +|-|+|....++++.+ . +.+|+++++++....     ......++.++.+++.+...+..-  +..+|.|+.-.|.++
T Consensus        30 ~t~G~Gghs~~il~~~-~-~~~vi~~D~d~~~l~~a~~~l~~~~~r~~~~~~~f~~~~~~~~~~~~~~vdgIl~DlGvSs  107 (192)
T d1m6ya2          30 CTVGEGGHSRAILEHC-P-GCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYREADFLLKTLGIEKVDGILMDLGVST  107 (192)
T ss_dssp             TTCTTSHHHHHHHHHC-T-TCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGGHHHHHHHTTCSCEEEEEEECSCCH
T ss_pred             ecCCCcHHHHHHHhcC-C-CCeEEEeechHHHHHHHHHhhccccccccchhHHHhhHHHHHHHcCCCCcceeeeccchhH
Confidence            5666777777777665 3 468999999975421     122356899999999886665444  357899988877753

>d1gado1 c.2.1.3 (O:0-148,O:313-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Escherichia coli [TaxId: 562]

Probab=84.74  E-value=2.6  Score=29.91  Aligned_cols=93  Identities=18%  Similarity=0.205  Sum_probs=55.3

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCC-CeEEEEecCCCcc----------cccccCC--------------ceeEEeccCCC
Q 023205           57 EKLLVLGGNGFVGSHICREALDRG-LTVASLSRSGRSS----------LRDSWAN--------------NVIWHQGNLLS  111 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g-~~V~~l~R~~~~~----------~~~~~~~--------------~~~~i~~Dl~d  111 (286)
                      ++|.|-| =|.||+.+++.++++. .+|.++.-..+..          ....+..              .+.+..  -.+
T Consensus         2 ikigING-FGRIGR~v~R~~~~~~~i~ivaINd~~~~~~~ayLl~yDSvhG~~~~~v~~~~~~l~ing~~I~i~~--~~~   78 (166)
T d1gado1           2 IKVGING-FGRIGRIVFRAAQKRSDIEIVAINDLLDADYMAYMLKYDSTHGRFDGTVEVKDGHLIVNGKKIRVTA--ERD   78 (166)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHTCSSEEEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEEC--CSS
T ss_pred             eEEEEEC-CcHHHHHHHHHHhhCCCeEEEEEeCCCCHHHHhhhheecCCCCCcCCeEEEeCCEEEECCEEEEEEe--CCC
Confidence            4788888 5999999999999985 5777776432211          0000111              222221  234


Q ss_pred             HhHHHHHhcCCCEEEEccccCCCcchhhhhhhHHHHHHHHHHHHcCCCEEEEE
Q 023205          112 SDSWKEALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYI  164 (286)
Q Consensus       112 ~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~l~~~a~~~~v~~~v~~  164 (286)
                      ++.+.=--.++|+|+-|.|.+.....            ++.--+.|+|++|..
T Consensus        79 p~~i~W~~~gvDiViEcTG~f~t~~~------------~~~hl~~gakkViiS  119 (166)
T d1gado1          79 PANLKWDEVGVDVVAEATGLFLTDET------------ARKHITAGAKKVVMT  119 (166)
T ss_dssp             GGGGCHHHHTCSEEEECSSSCCSHHH------------HTHHHHTTCSEEEES
T ss_pred             hHHCCccccCCCEEEEccccccCHHH------------HHHHhcCCCceEEee
Confidence            55433223479999999998755332            222235689887763

>d1qkia1 c.2.1.3 (A:12-199,A:435-449) Glucose 6-phosphate dehydrogenase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose 6-phosphate dehydrogenase, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.71  E-value=1.3  Score=32.78  Aligned_cols=37  Identities=14%  Similarity=0.258  Sum_probs=25.8

Q ss_pred             CCeEEEEcCCChhHHHHH-H---HHHHCC-----CeEEEEecCCCc
Q 023205           56 SEKLLVLGGNGFVGSHIC-R---EALDRG-----LTVASLSRSGRS   92 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~-~---~Ll~~g-----~~V~~l~R~~~~   92 (286)
                      ..+++|+||||-+...-+ .   .|...|     ..|+++.|++-.
T Consensus        20 ~~t~VIFGatGDLA~RKL~PALf~L~~~g~Lp~~~~Iig~aR~~~s   65 (203)
T d1qkia1          20 THIFIIMGASGDLAKKKIYPTIWWLFRDGLLPENTFIVGYARSRLT   65 (203)
T ss_dssp             CEEEEEETTTSHHHHHTHHHHHHHHHHTTCSCSSEEEEEEBSSCCS
T ss_pred             CcEEEEECcccHHHHhHHHHHHHHHHHcCCCCCCcEEEEEECCCCC
Confidence            457999999999987532 2   223333     489999998643

>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=84.50  E-value=2.9  Score=31.42  Aligned_cols=33  Identities=24%  Similarity=0.229  Sum_probs=27.8

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHH-CCCeEEEEec
Q 023205           55 PSEKLLVLGGNGFVGSHICREALD-RGLTVASLSR   88 (286)
Q Consensus        55 ~~~~VlVtGatG~iG~~l~~~Ll~-~g~~V~~l~R   88 (286)
                      ..++|+|-| .|.+|+++++.|.+ .|..|++++-
T Consensus        30 ~g~~vaIqG-~GnVG~~~a~~L~~e~Ga~vv~vsd   63 (234)
T d1b26a1          30 KKATVAVQG-FGNVGQFAALLISQELGSKVVAVSD   63 (234)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHHHCCEEEEEEE
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHhcCCceEEeec
Confidence            467899998 69999999999975 5999887774

>d2bw0a2 c.65.1.1 (A:1-203) 10-formyltetrahydrofolate dehydrogenase domain 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: 10-formyltetrahydrofolate dehydrogenase domain 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.82  E-value=0.72  Score=34.13  Aligned_cols=34  Identities=18%  Similarity=0.266  Sum_probs=28.2

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCC
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGR   91 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~   91 (286)
                      |||++.|. +..|..+++.|+++|++|.++.-.++
T Consensus         1 MkI~~~G~-~~~~~~~l~~L~~~~~~i~~V~t~p~   34 (203)
T d2bw0a2           1 MKIAVIGQ-SLFGQEVYCHLRKEGHEVVGVFTVPD   34 (203)
T ss_dssp             CEEEEECC-HHHHHHHHHHHHHTTCEEEEEEECCC
T ss_pred             CEEEEEcC-CHHHHHHHHHHHHCCCcEEEEEcCCC
Confidence            58999985 78899999999999999987765443

>d1cjca2 c.4.1.1 (A:6-106,A:332-460) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Adrenodoxin reductase of mitochondrial p450 systems
species: Cow (Bos taurus) [TaxId: 9913]

Probab=83.52  E-value=0.63  Score=34.79  Aligned_cols=34  Identities=18%  Similarity=0.200  Sum_probs=29.5

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHC--CCeEEEEecCCC
Q 023205           57 EKLLVLGGNGFVGSHICREALDR--GLTVASLSRSGR   91 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~--g~~V~~l~R~~~   91 (286)
                      ++|+|.|| |--|...+..|.+.  |++|+++.+.+.
T Consensus         2 ~kv~iIGa-GpaGl~aA~~L~~~~~~~~V~v~e~~~~   37 (230)
T d1cjca2           2 PQICVVGS-GPAGFYTAQHLLKHHSRAHVDIYEKQLV   37 (230)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHCSSCEEEEECSSSS
T ss_pred             CeEEEECc-cHHHHHHHHHHHhcCCCCeEEEEeCCCC
Confidence            38999996 99999999999875  689999988754

>d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Pyrococcus abyssi [TaxId: 29292]

Probab=83.51  E-value=0.74  Score=37.64  Aligned_cols=33  Identities=27%  Similarity=0.278  Sum_probs=24.5

Q ss_pred             CeEEEEcC------CChhH---HHHHHHHHHCCCeEEEEecC
Q 023205           57 EKLLVLGG------NGFVG---SHICREALDRGLTVASLSRS   89 (286)
Q Consensus        57 ~~VlVtGa------tG~iG---~~l~~~Ll~~g~~V~~l~R~   89 (286)
                      ||||+++.      +|++|   ..|+++|.++||+|++++..
T Consensus         1 MkIl~~~~~~pP~~~GG~~~~~~~La~~L~~~Gh~V~Vvtp~   42 (437)
T d2bisa1           1 MKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTPS   42 (437)
T ss_dssp             CEEEEECSCCTTCCSSSHHHHHHHHHHHHHHTTCEEEEEEEC
T ss_pred             CEEEEECCccCCcccCCHHHHHHHHHHHHHHcCCEEEEEecC
Confidence            56777553      35555   66789999999999998754

>d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase {Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Phenol hydroxylase
species: Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]

Probab=83.22  E-value=0.57  Score=37.27  Aligned_cols=33  Identities=21%  Similarity=0.345  Sum_probs=28.8

Q ss_pred             EEEEcCCChhHHHHHHHHH-----HCCCeEEEEecCCCc
Q 023205           59 LLVLGGNGFVGSHICREAL-----DRGLTVASLSRSGRS   92 (286)
Q Consensus        59 VlVtGatG~iG~~l~~~Ll-----~~g~~V~~l~R~~~~   92 (286)
                      |+|.|| |-.|..++..|.     +.|++|+++.|++..
T Consensus        10 V~IvGa-G~aGl~lA~~La~~~~~~~G~~v~vlEr~~~~   47 (360)
T d1pn0a1          10 VLIVGA-GPAGLMAARVLSEYVRQKPDLKVRIIDKRSTK   47 (360)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHHHHSTTCCEEEECSSSSC
T ss_pred             EEEECc-CHHHHHHHHHHHhcccccCCCcEEEEcCCCCC
Confidence            899997 999999999996     468999999987654

>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=83.17  E-value=0.64  Score=36.45  Aligned_cols=32  Identities=25%  Similarity=0.338  Sum_probs=29.4

Q ss_pred             EEEEcCCChhHHHHHHHHHHCCCeEEEEecCCC
Q 023205           59 LLVLGGNGFVGSHICREALDRGLTVASLSRSGR   91 (286)
Q Consensus        59 VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~   91 (286)
                      |+|.|+ |..|...+.+|.++|.+|+++.+.+.
T Consensus        19 VlVIG~-G~aGl~aA~~la~~G~~V~lvEK~~~   50 (308)
T d1y0pa2          19 VVVVGS-GGAGFSAAISATDSGAKVILIEKEPV   50 (308)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEecCCC
Confidence            999996 99999999999999999999998653

>d3coxa1 c.3.1.2 (A:5-318,A:451-506) Cholesterol oxidase of GMC family {Brevibacterium sterolicum [TaxId: 1702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Cholesterol oxidase of GMC family
species: Brevibacterium sterolicum [TaxId: 1702]

Probab=83.10  E-value=0.57  Score=37.86  Aligned_cols=30  Identities=20%  Similarity=0.379  Sum_probs=27.7

Q ss_pred             EEEEcCCChhHHHHHHHHHHCCCeEEEEecC
Q 023205           59 LLVLGGNGFVGSHICREALDRGLTVASLSRS   89 (286)
Q Consensus        59 VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~   89 (286)
                      |+|.|+ |+-|..++.+|.++|++|.+|-+-
T Consensus        10 vIVVGs-G~aG~v~A~rLaeaG~~VlvLEaG   39 (370)
T d3coxa1          10 ALVIGS-GYGGAVAALRLTQAGIPTQIVEMG   39 (370)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCeEEEEeCC
Confidence            889995 999999999999999999999974

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=82.79  E-value=0.67  Score=35.68  Aligned_cols=35  Identities=17%  Similarity=0.188  Sum_probs=30.3

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCeEEEEecC
Q 023205           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRS   89 (286)
Q Consensus        54 ~~~~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~   89 (286)
                      ...++|+|-| -|.+|+++++.|.+.|.+|++++-.
T Consensus        34 l~g~~v~IQG-fGnVG~~~a~~L~e~GakvvavsD~   68 (255)
T d1bgva1          34 LVGKTVALAG-FGNVAWGAAKKLAELGAKAVTLSGP   68 (255)
T ss_dssp             STTCEEEECC-SSHHHHHHHHHHHHHTCEEEEEEET
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEecC
Confidence            3467999999 5999999999999999999988643

>d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium pasteurianum [TaxId: 1501]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Nitrogenase iron protein
species: Clostridium pasteurianum [TaxId: 1501]

Probab=82.45  E-value=0.49  Score=36.49  Aligned_cols=35  Identities=14%  Similarity=0.244  Sum_probs=28.8

Q ss_pred             CCeEEEEcCCChhHHHHHH-----HHHHCCCeEEEEecCCC
Q 023205           56 SEKLLVLGGNGFVGSHICR-----EALDRGLTVASLSRSGR   91 (286)
Q Consensus        56 ~~~VlVtGatG~iG~~l~~-----~Ll~~g~~V~~l~R~~~   91 (286)
                      |++|.|+| -|++|+-.+.     .|.++|++|.+++-++.
T Consensus         1 mr~Iai~g-KGGvGKTT~a~nLA~~LA~~G~rVllID~D~q   40 (269)
T d1cp2a_           1 MRQVAIYG-KGGIGKSTTTQNLTSGLHAMGKTIMVVGCDPK   40 (269)
T ss_dssp             CEEEEEEE-CTTSSHHHHHHHHHHHHHTTTCCEEEEEECTT
T ss_pred             CCEEEEEC-CCcCCHHHHHHHHHHHHHhCCCcEEEEecCCC
Confidence            56899998 8888876554     77788999999999864

>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Hypothetical protein HI0933
species: Haemophilus influenzae [TaxId: 727]

Probab=82.44  E-value=0.79  Score=34.87  Aligned_cols=33  Identities=15%  Similarity=0.335  Sum_probs=30.2

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCC
Q 023205           58 KLLVLGGNGFVGSHICREALDRGLTVASLSRSGR   91 (286)
Q Consensus        58 ~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~   91 (286)
                      .|+|.|| |-.|...+-.|.++|.+|.++.+.+.
T Consensus         6 DViIIGa-G~aGl~aA~~la~~G~~V~vlEk~~~   38 (253)
T d2gqfa1           6 ENIIIGA-GAAGLFCAAQLAKLGKSVTVFDNGKK   38 (253)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred             cEEEECc-CHHHHHHHHHHHHCCCcEEEEecCCC
Confidence            4999997 99999999999999999999998864

>d1vkza2 c.30.1.1 (A:4-93) Glycinamide ribonucleotide synthetase (GAR-syn), N-domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide synthetase (GAR-syn), N-domain
species: Thermotoga maritima [TaxId: 2336]

Probab=82.42  E-value=1.2  Score=28.24  Aligned_cols=32  Identities=19%  Similarity=0.188  Sum_probs=26.7

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCeEEEEecC
Q 023205           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRS   89 (286)
Q Consensus        57 ~~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~   89 (286)
                      |||||.|+ |.=-.+++..|.++..+|++.--+
T Consensus         1 MkVLviGs-GgREHAia~~l~~s~~~v~~~pGN   32 (90)
T d1vkza2           1 VRVHILGS-GGREHAIGWAFAKQGYEVHFYPGN   32 (90)
T ss_dssp             CEEEEEEC-SHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             CEEEEECC-CHHHHHHHHHHhcCCCeEEEecCC
Confidence            68999996 666889999999998999987543

>d2f5va1 c.3.1.2 (A:43-354,A:553-619) Pyranose 2-oxidase {White-rot fungus (Peniophora sp. SG) [TaxId: 204723]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Pyranose 2-oxidase
species: White-rot fungus (Peniophora sp. SG) [TaxId: 204723]

Probab=82.07  E-value=0.7  Score=37.07  Aligned_cols=30  Identities=27%  Similarity=0.530  Sum_probs=27.8

Q ss_pred             EEEEcCCChhHHHHHHHHHHCCCeEEEEecC
Q 023205           59 LLVLGGNGFVGSHICREALDRGLTVASLSRS   89 (286)
Q Consensus        59 VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~   89 (286)
                      |+|.|+ |.-|..++.+|.+.|++|.++-+-
T Consensus         7 viIVGs-G~aG~v~A~~La~~G~kVlvLEaG   36 (379)
T d2f5va1           7 VVIVGS-GPIGCTYARELVGAGYKVAMFDIG   36 (379)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCEEEEECSS
T ss_pred             EEEECc-CHHHHHHHHHHhhCCCeEEEEecC
Confidence            899995 999999999999999999999874

>d1rp0a1 c.3.1.6 (A:7-284) Thiazole biosynthetic enzyme Thi4 {Thale cress(Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Thi4-like
domain: Thiazole biosynthetic enzyme Thi4
species: Thale cress(Arabidopsis thaliana) [TaxId: 3702]

Probab=81.54  E-value=0.83  Score=35.31  Aligned_cols=33  Identities=24%  Similarity=0.339  Sum_probs=29.4

Q ss_pred             eEEEEcCCChhHHHHHHHHHHC-CCeEEEEecCCC
Q 023205           58 KLLVLGGNGFVGSHICREALDR-GLTVASLSRSGR   91 (286)
Q Consensus        58 ~VlVtGatG~iG~~l~~~Ll~~-g~~V~~l~R~~~   91 (286)
                      -|+|.|| |.-|...+.+|.++ |++|.++.+.+.
T Consensus        35 DViVIGa-GpaGL~aA~~LA~~~G~~V~vlE~~~~   68 (278)
T d1rp0a1          35 DVVVVGA-GSAGLSAAYEISKNPNVQVAIIEQSVS   68 (278)
T ss_dssp             EEEEECC-SHHHHHHHHHHHTSTTSCEEEEESSSS
T ss_pred             CEEEECC-CHHHHHHHHHHHHccCCeEEEEecCCC
Confidence            3999997 99999999999875 999999998753

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=80.94  E-value=0.58  Score=32.90  Aligned_cols=33  Identities=21%  Similarity=0.207  Sum_probs=26.9

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCeEEEEecCCCc
Q 023205           58 KLLVLGGNGFVGSHICREALDRGLTVASLSRSGRS   92 (286)
Q Consensus        58 ~VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~~~~   92 (286)
                      ||.+.|- |.+|..+++.|++.|+.+ ...|..++
T Consensus         2 kIg~IGl-G~MG~~ma~~L~~~g~~~-~~~~~~~~   34 (156)
T d2cvza2           2 KVAFIGL-GAMGYPMAGHLARRFPTL-VWNRTFEK   34 (156)
T ss_dssp             CEEEECC-STTHHHHHHHHHTTSCEE-EECSSTHH
T ss_pred             eEEEEeH-HHHHHHHHHHHHhCCCEE-EEeCCHHH
Confidence            6889995 999999999999988765 56776554

>d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=80.64  E-value=0.99  Score=33.22  Aligned_cols=30  Identities=23%  Similarity=0.285  Sum_probs=27.9

Q ss_pred             EEEEcCCChhHHHHHHHHHHCCCeEEEEecC
Q 023205           59 LLVLGGNGFVGSHICREALDRGLTVASLSRS   89 (286)
Q Consensus        59 VlVtGatG~iG~~l~~~Ll~~g~~V~~l~R~   89 (286)
                      |+|.|| |..|...+.++.+.|.+|.++.++
T Consensus         5 vvVIG~-G~aG~~aA~~a~~~G~kV~iiE~~   34 (217)
T d1gesa1           5 YIAIGG-GSGGIASINRAAMYGQKCALIEAK   34 (217)
T ss_dssp             EEEECC-SHHHHHHHHHHHTTTCCEEEEESS
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCEEEEEecc
Confidence            789997 999999999999999999999875

>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Peptidoglycan biosynthesis glycosyltransferase MurG
domain: Peptidoglycan biosynthesis glycosyltransferase MurG
species: Escherichia coli [TaxId: 562]

Probab=80.53  E-value=0.76  Score=36.34  Aligned_cols=33  Identities=27%  Similarity=0.568  Sum_probs=22.8

Q ss_pred             CeEEEEcC-C-Chh--HHHHHHHHHHCCCeEEEEecC
Q 023205           57 EKLLVLGG-N-GFV--GSHICREALDRGLTVASLSRS   89 (286)
Q Consensus        57 ~~VlVtGa-t-G~i--G~~l~~~Ll~~g~~V~~l~R~   89 (286)
                      |||+|++| | |.+  +..|+++|.++|++|..+...
T Consensus         1 kkili~~~GtGGHv~~a~al~~~L~~~G~eV~~i~~~   37 (351)
T d1f0ka_           1 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTA   37 (351)
T ss_dssp             CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECT
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHHHHhCCCEEEEEEeC
Confidence            57877764 3 232  234889999999999877643