BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 023206
(286 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q7XA73|TIF4A_ARATH Protein TIFY 4A OS=Arabidopsis thaliana GN=TIFY4A PE=1 SV=1
Length = 313
Score = 146 bits (369), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 98/251 (39%), Positives = 131/251 (52%), Gaps = 42/251 (16%)
Query: 1 MRRPSWNKSQAIQQVICLKTLLETTTDTEATEARRKLYSVPSHSAVTVKETCEP------ 54
MRRPSWNKSQAIQQV+ LK L E D+ A R+ L S P + EP
Sbjct: 41 MRRPSWNKSQAIQQVLSLKALYEPGDDSGAGIFRKILVSQPVNPPRVTTTLIEPSNELEA 100
Query: 55 ----------APCRRQDAPM-PDFSGDSSSRLA---ADSESISPRTTVAAKEAVGQMTIF 100
C R D+P +FSG S ++ +ISPR+ E VGQMTIF
Sbjct: 101 CGRVSYPEDNGACHRMDSPRSAEFSGGSGHFVSEKDGHKTTISPRSPAETSELVGQMTIF 160
Query: 101 YSGKVNVYDDMPSEKAQAILQLAASPLPLSQKAPSDGTTGLQSVPCHLQTAGINVGPSSP 160
YSGKVNVYD +P EKA++I+ AA+P+ L P +G + SS
Sbjct: 161 YSGKVNVYDGIPPEKARSIMHFAANPIDL----PENG-----------------IFASSR 199
Query: 161 VIFPTLQTVKVVENCQLPWEESNISHEDSFDGPTSRKASVQRYREKRKDR-FKNKRKIAM 219
+I + K++E Q E++N S + +G +RK S+QRYREKRKDR F +K
Sbjct: 200 MISKLISKEKMMELPQKGLEKANSSRDSGMEGQANRKVSLQRYREKRKDRKFSKAKKCPG 259
Query: 220 PSSSSLDVYLN 230
+SSSL+++LN
Sbjct: 260 VASSSLEMFLN 270
>sp|Q8GY55|TIF4B_ARATH Protein TIFY 4B OS=Arabidopsis thaliana GN=TIFY4B PE=1 SV=1
Length = 315
Score = 144 bits (363), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 100/254 (39%), Positives = 133/254 (52%), Gaps = 45/254 (17%)
Query: 1 MRRPSWNKSQAIQQVICLKTLLETTTDTEATEARRKLYSVPSHSAVTVKETCEP------ 54
MRRPSWNKSQAIQQV+ LK L E D+ A R+ L S P + EP
Sbjct: 41 MRRPSWNKSQAIQQVLSLKALYEPGDDSGAGILRKILVSQPPNPPRVTTTLIEPRNELEA 100
Query: 55 ----------APCRRQDAPM-PDFSGDSSSRLAADSES-----ISPRTTVAAKEAVGQMT 98
C R+D+P +FSG SS + AD +S +SPR+ VGQMT
Sbjct: 101 CGRIPLQEDDGACHRRDSPRSAEFSG-SSGQFVADKDSHKTVSVSPRSPAETNAVVGQMT 159
Query: 99 IFYSGKVNVYDDMPSEKAQAILQLAASPLPLSQKAPSDGTTGLQSVPCHLQTAGINVGPS 158
IFYSGKVNVYD +P EKA++I+ AA+P+ L P +G + S
Sbjct: 160 IFYSGKVNVYDGVPPEKARSIMHFAANPIDL----PENG-----------------IFAS 198
Query: 159 SPVIFPTLQTVKVVENCQLPWEESNISHEDSFDGPTSRKASVQRYREKRKD-RFKNKRKI 217
S +I + K+VE Q E++ S + +G +RK S+QRY EKRKD RF +K
Sbjct: 199 SRMISKPMSKEKMVELPQYGLEKAPASRDSDVEGQANRKVSLQRYLEKRKDRRFSKTKKA 258
Query: 218 AMPSSSSLDVYLNR 231
+SSSL+++LNR
Sbjct: 259 PGVASSSLEMFLNR 272
>sp|Q9C5K8|TIF3B_ARATH Protein TIFY 3B OS=Arabidopsis thaliana GN=TIFY3B PE=1 SV=1
Length = 187
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 61/128 (47%), Gaps = 33/128 (25%)
Query: 96 QMTIFYSGKVNVYDDMPSEKAQAILQLAASPL---------PLSQKAPSDGTTGLQSVPC 146
Q+TIF+ G V V+D +PSEK Q IL++AA + P+S A L P
Sbjct: 57 QLTIFFGGSVTVFDGLPSEKVQEILRIAAKAMETKNSTSISPVSSPA-------LNRAPS 109
Query: 147 HLQTAGINVGPSSPVIFPTLQTVKVVENCQLPWEESNISHEDSFDGPTSRKASVQRYREK 206
T+ + + P FP ++ + C+ + D P +R+ S+QR+ EK
Sbjct: 110 FSSTSNVASPAAQP--FP----IQPISFCR-----------STADLPIARRHSLQRFLEK 152
Query: 207 RKDRFKNK 214
R+DR NK
Sbjct: 153 RRDRLVNK 160
>sp|Q9M246|TIF3A_ARATH Protein TIFY 3A OS=Arabidopsis thaliana GN=TIFY3A PE=1 SV=1
Length = 238
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 52/116 (44%), Gaps = 31/116 (26%)
Query: 96 QMTIFYSGKVNVYDDMPSEKAQAILQLAASPLPLSQKAPSDGTTGLQSVPCHLQTAGINV 155
Q+TI + G +V+D +P+EK Q IL +AA+ A + T L S+ L+ A
Sbjct: 131 QLTIIFGGSFSVFDGIPAEKVQEILHIAAA-------AKATETINLTSINPALKRA---- 179
Query: 156 GPSSPVIFPTLQTVKVVENCQLPWEESNISHEDSFDGPTSRKASVQRYREKRKDRF 211
+ F TV V D P +R+ S+QR+ EKR+ RF
Sbjct: 180 -----ISFSNASTVACVSTA---------------DVPIARRRSLQRFFEKRRHRF 215
>sp|Q9LVI4|TIF6B_ARATH Protein TIFY 6B OS=Arabidopsis thaliana GN=TIFY6B PE=1 SV=1
Length = 352
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 65/161 (40%), Gaps = 33/161 (20%)
Query: 96 QMTIFYSGKVNVYDDMPSEKAQAILQLAASPLPLSQKAPSDGTTGLQSVPCHLQTAGINV 155
Q+TIFY+G V VYDD+ EKA+AI+ LA + + Q S T Q V H A ++
Sbjct: 178 QLTIFYAGSVCVYDDISPEKAKAIMLLAGNGSSMPQVF-SPPQTHQQVV--HHTRASVDS 234
Query: 156 GPSSPVIFPT--------------LQTVKVVE----------------NCQLPWEESNIS 185
P PT L K NC +P S
Sbjct: 235 SAMPPSFMPTISYLSPEAGSSTNGLGATKATRGLTSTYHNNQANGSNINCPVPVSCSTNV 294
Query: 186 HEDSFDGPTSRKASVQRYREKRKDRFKNKRKIAMPSSSSLD 226
+ P +RKAS+ R+ EKRK+R + + SS D
Sbjct: 295 MAPTVALPLARKASLARFLEKRKERVTSVSPYCLDKKSSTD 335
>sp|Q58G47|TIF6A_ARATH Protein TIFY 6A OS=Arabidopsis thaliana GN=TIFY6A PE=1 SV=1
Length = 310
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 69/155 (44%), Gaps = 33/155 (21%)
Query: 96 QMTIFYSGKVNVYDDMPSEKAQAILQLAAS---PLPLSQKAPSDGTT------------- 139
Q+TIFY+G V VY D+ EKAQAI+ LA + P+SQ P
Sbjct: 147 QLTIFYAGSVLVYQDIAPEKAQAIMLLAGNGPHAKPVSQPKPQKLVHHSLPTTDPPTMPP 206
Query: 140 ----GLQSVPCHLQTAGIN----VGPSSPVIFPTLQTVKVVENCQLPWEESNISHEDSFD 191
+ + +++G N +GP+ T ++ N Q + S +
Sbjct: 207 SFLPSISYIVSETRSSGSNGVTGLGPTK-----TKASLASTRNNQ----TAAFSMAPTVG 257
Query: 192 GPTSRKASVQRYREKRKDRFKNKRKIAMPSSSSLD 226
P +RKAS+ R+ EKRK+R N + + SS+D
Sbjct: 258 LPQTRKASLARFLEKRKERVINVSPYYVDNKSSID 292
>sp|Q9LDU5|TI11A_ARATH Protein TIFY 11A OS=Arabidopsis thaliana GN=TIFY11A PE=1 SV=1
Length = 274
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 58/117 (49%), Gaps = 18/117 (15%)
Query: 96 QMTIFYSGKVNVYDDMPSEKAQAILQLAASPLPLSQKAPSDGTTGLQSVPCHLQT--AGI 153
Q+TIF+ GKV VY++ P +KA+ I+++A P+++ ++QT
Sbjct: 98 QLTIFFGGKVLVYNEFPVDKAKEIMEVAKQAKPVTE--------------INIQTPINDE 143
Query: 154 NVGPSSPVIFPTLQTVKVVENCQLPWEESNISHEDSFDGPTSRKASVQRYREKRKDR 210
N S ++ P L + +N L E+ ++ +R+AS+ R+ KRKDR
Sbjct: 144 NNNNKSSMVLPDLN--EPTDNNHLTKEQQQQQEQNQIVERIARRASLHRFFAKRKDR 198
>sp|Q8W4J8|TIF7_ARATH Protein TIFY 7 OS=Arabidopsis thaliana GN=TIFY7 PE=1 SV=2
Length = 267
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 73/153 (47%), Gaps = 28/153 (18%)
Query: 81 SISPRTTVAAKEAVGQMTIFYSGKVNVYDDMPSEKAQAILQLAASPLPLSQKAPSDGTTG 140
S+ PR VA+ + Q+TIFY G ++V++D+ +KAQAI+ A + L G TG
Sbjct: 106 SLVPR--VASSGSSPQLTIFYGGTISVFNDISPDKAQAIMLCAGNGL--------KGETG 155
Query: 141 LQSVPCH--LQTAGINVGPSSPVIFPTLQTVKVVENCQ-LPWEESN-ISHEDSFDG---- 192
S P + G + ++ + C+ P +N +S +SF+
Sbjct: 156 -DSKPVREAERMYGKQIHNTAATSSSSATHTDNFSRCRDTPVAATNAMSMIESFNAAPRN 214
Query: 193 -----PTSRKASVQRYREKRKDRFKNKRKIAMP 220
P +RKAS+ R+ EKRK+R + AMP
Sbjct: 215 MIPSVPQARKASLARFLEKRKERLMS----AMP 243
>sp|Q9S7M2|TI10B_ARATH Protein TIFY 10B OS=Arabidopsis thaliana GN=TIFY10B PE=1 SV=1
Length = 249
Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 56/125 (44%), Gaps = 26/125 (20%)
Query: 97 MTIFYSGKVNVYDDMPSEKAQAILQLAASPLPLSQKAPSDGTTGLQSVPCHLQTAGINVG 156
+TIFY G+V V+DD +EKA+ ++ LA S K+ + T + + I
Sbjct: 120 LTIFYGGRVMVFDDFSAEKAKEVIDLANKG---SAKSFTCFTAEVNNNHSAYSQKEIASS 176
Query: 157 PSSPVIFPT-------LQTVKVVENCQLPWEESNISHEDSFDGPTSRKASVQRYREKRKD 209
P +PV P +Q C+L P +R+AS+ R+ EKRKD
Sbjct: 177 P-NPVCSPAKTAAQEPIQPNPASLACEL---------------PIARRASLHRFLEKRKD 220
Query: 210 RFKNK 214
R +K
Sbjct: 221 RITSK 225
>sp|Q84MB2|TIF8_ARATH Protein TIFY 8 OS=Arabidopsis thaliana GN=TIFY8 PE=1 SV=1
Length = 361
Score = 40.4 bits (93), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 35/60 (58%), Gaps = 7/60 (11%)
Query: 67 FSGDSSSRLAADSESISPRTTVAAKE---AVGQMTIFYSGKVNVYDDMPSEKAQAILQLA 123
F+ +SS+L ES +P T K+ + QMTIFY G+ +V+DD+ KA I+ LA
Sbjct: 210 FTMPNSSKL----ESFAPSNTGNRKDLASSTKQMTIFYGGQAHVFDDVHPNKADVIMALA 265
>sp|Q9LMA8|TI10A_ARATH Protein TIFY 10A OS=Arabidopsis thaliana GN=TIFY10A PE=1 SV=1
Length = 253
Score = 40.4 bits (93), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 55/123 (44%), Gaps = 31/123 (25%)
Query: 97 MTIFYSGKVNVYDDMPSEKAQAILQLA----ASPLPLSQK-APSDGTTGLQSVPCHLQTA 151
+TIFY+G+V V++D +EKA+ ++ LA A+ L +Q S+ T VP +T
Sbjct: 127 LTIFYAGQVIVFNDFSAEKAKEVINLASKGTANSLAKNQTDIRSNIATIANQVPHPRKTT 186
Query: 152 GINVGPSSPVIFPTLQTVKVVENCQLPWEESNISHEDSFDGPTSRKASVQRYREKRKDRF 211
SSP L P +R+AS+ R+ EKRKDR
Sbjct: 187 TQEPIQSSPTPLTEL--------------------------PIARRASLHRFLEKRKDRV 220
Query: 212 KNK 214
+K
Sbjct: 221 TSK 223
>sp|Q9C9E3|TI11B_ARATH Protein TIFY 11B OS=Arabidopsis thaliana GN=TIFY11B PE=1 SV=1
Length = 269
Score = 40.0 bits (92), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 54/123 (43%), Gaps = 18/123 (14%)
Query: 88 VAAKEAVGQMTIFYSGKVNVYDDMPSEKAQAILQLAASPLPLSQKAPSDGTTGLQSVPCH 147
VA + Q+TIF+ GKV V+++ P +KA+ I+++A K + ++ H
Sbjct: 98 VAPESGNSQLTIFFGGKVMVFNEFPEDKAKEIMEVA--------KEANHVAVDSKNSQSH 149
Query: 148 LQTAGINVGPSSPVIFPTLQTVKVVENCQLPWEESNISHEDSFDGPTSRKASVQRYREKR 207
+ N V+ P L N E+ + +R+AS+ R+ KR
Sbjct: 150 MNLDKSN------VVIPDLNEPTSSGNN----EDQETGQQHQVVERIARRASLHRFFAKR 199
Query: 208 KDR 210
KDR
Sbjct: 200 KDR 202
>sp|P03308|POLG_FMDVA Genome polyprotein OS=Foot-and-mouth disease virus (strain A12)
PE=1 SV=1
Length = 2332
Score = 33.1 bits (74), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 38/86 (44%), Gaps = 8/86 (9%)
Query: 80 ESISPRTTVAAKEAVGQMTIFYSGKVNVYDDMPSEKAQAILQLAASPLPLSQKAPSDGTT 139
+ ISPRT + A +T+ Y G VN YD K ++ + SPL +S A +
Sbjct: 431 QFISPRTNMTA-----HITVPYLG-VNRYDQYKKHKPWTLVIMVLSPLTVSNTAATQIKV 484
Query: 140 GLQSVPCHLQTAGINVGPSSPVIFPT 165
P ++ AG PS IFP
Sbjct: 485 YANIAPTYVHVAG--ELPSKVGIFPV 508
>sp|P03306|POLG_FMDV1 Genome polyprotein OS=Foot-and-mouth disease virus (strain A10-61)
PE=1 SV=2
Length = 2332
Score = 32.3 bits (72), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 37/86 (43%), Gaps = 8/86 (9%)
Query: 80 ESISPRTTVAAKEAVGQMTIFYSGKVNVYDDMPSEKAQAILQLAASPLPLSQKAPSDGTT 139
+ ISPRT + A +T+ Y G VN YD K ++ + SPL +S A
Sbjct: 432 QFISPRTNMTA-----HITVPYLG-VNRYDQYKKHKPWTLVVMVLSPLTVSNTAAPQIKV 485
Query: 140 GLQSVPCHLQTAGINVGPSSPVIFPT 165
P ++ AG PS IFP
Sbjct: 486 YANIAPTYVHVAG--ELPSKEGIFPV 509
>sp|Q9LRH6|GAT25_ARATH GATA transcription factor 25 OS=Arabidopsis thaliana GN=GATA25 PE=2
SV=2
Length = 309
Score = 31.6 bits (70), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 58/152 (38%), Gaps = 41/152 (26%)
Query: 92 EAVGQMTIFYSGKVNVYDDMPSEKAQAILQLAASPLPLSQKAPSDGTTGLQSVPCHLQTA 151
E Q+TI + G+V V+D + ++K A+L L L AP L H+
Sbjct: 79 EGANQLTISFRGQVYVFDAVGADKVDAVLSLLGGSTEL---APGPQVMELAQQQNHM--- 132
Query: 152 GINVGPSSPVIFPTLQTVKVVENCQLPWEESNISHEDSFDGPTSRKASVQRYREKRKDR- 210
PV V+ C LP R S+ R+R+KR R
Sbjct: 133 --------PV-------VEYQSRCSLP----------------QRAQSLDRFRKKRNARC 161
Query: 211 FKNKRKIAMPSSSSLDVYLNRWVGDQFANEQL 242
F+ K + + +L + N+ QF + ++
Sbjct: 162 FEKKVRYGVRQEVALRMARNKG---QFTSSKM 190
>sp|Q4P209|EAF11_USTMA Chromatin modification-related protein EAF1 OS=Ustilago maydis
(strain 521 / FGSC 9021) GN=EAF1 PE=3 SV=1
Length = 1654
Score = 31.2 bits (69), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 52/104 (50%), Gaps = 5/104 (4%)
Query: 68 SGDSSSRL--AADSESISPRTTVAAKEAVGQMTIFYSGKVNVYDDMPSEKAQAILQLAAS 125
S DSS+ + A+D++ + TT++A EAV S + D PS KA L+ A S
Sbjct: 306 SSDSSTAVLVASDAQKVDSHTTMSAAEAVTPAIKVES--TDNIDASPS-KASHALEKAVS 362
Query: 126 PLPLSQKAPSDGTTGLQSVPCHLQTAGINVGPSSPVIFPTLQTV 169
P+P + S +T L+ P + I ++P + PTLQ +
Sbjct: 363 PVPGLARNASTQSTSLRVPPSPMVVPTIPENITAPPLHPTLQVL 406
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.311 0.125 0.362
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 102,634,142
Number of Sequences: 539616
Number of extensions: 4114536
Number of successful extensions: 8555
Number of sequences better than 100.0: 32
Number of HSP's better than 100.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 8519
Number of HSP's gapped (non-prelim): 42
length of query: 286
length of database: 191,569,459
effective HSP length: 116
effective length of query: 170
effective length of database: 128,974,003
effective search space: 21925580510
effective search space used: 21925580510
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 60 (27.7 bits)