BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 023208
(285 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9M1E7|TET3_ARATH Tetraspanin-3 OS=Arabidopsis thaliana GN=TET3 PE=2 SV=1
Length = 285
Score = 461 bits (1187), Expect = e-129, Method: Compositional matrix adjust.
Identities = 222/285 (77%), Positives = 242/285 (84%)
Query: 1 MRNSNHLIGLLNFFTFLLSIPIIGGGIWLSSRANNTDCLKFLQWPLIVIGVSIMVVSLAG 60
MR SNHLIGL+NF TFLLSIPI+GGGIWLSSRAN+TDCL+FLQWPLIVIG+SIMVVSLAG
Sbjct: 1 MRTSNHLIGLVNFLTFLLSIPILGGGIWLSSRANSTDCLRFLQWPLIVIGISIMVVSLAG 60
Query: 61 FAGACYRNTHLMRFYLFVMFFIIAALIGFIIFAYAVTDKGSGRPVMDRAYSEYHLEDYSG 120
FAGACYRN LM YL VM IIAALIGFIIFAYAVTDKGSGR V++R Y +Y+LEDYSG
Sbjct: 61 FAGACYRNKFLMWLYLVVMLLIIAALIGFIIFAYAVTDKGSGRTVLNRGYLDYYLEDYSG 120
Query: 121 WLKDRVTDDSYWGKISSCIRDSKVCPKMRRVINGAPETADMFSLRKLNPVQSGCCKPPAD 180
WLKDRV+DDSYWGKISSC+RDS C K+ R NG PETADMF LR+L+PV+SGCCKPP D
Sbjct: 121 WLKDRVSDDSYWGKISSCLRDSGACRKIGRNFNGVPETADMFFLRRLSPVESGCCKPPTD 180
Query: 181 CGFVYENETLWNPGGGLVGSNPDCTRWSNDQEQLCYQCDSCKAGVLASLKKSWRKVSVIN 240
CGF Y NET W+ GG++G N DC WSNDQ LCYQC SCKAGVL SLKKSWRKVSVIN
Sbjct: 181 CGFSYVNETGWDTRGGMIGPNQDCMVWSNDQSMLCYQCSSCKAGVLGSLKKSWRKVSVIN 240
Query: 241 IVVLIILVIFYVIGCAAFRNNRRIDNDEPYGEARMTKSRPSRIQF 285
IVVLIILVIFYVI AA+RN +RIDNDEP GEARMTKS PS
Sbjct: 241 IVVLIILVIFYVIAYAAYRNVKRIDNDEPAGEARMTKSHPSHFHL 285
>sp|Q9LSS4|TET4_ARATH Tetraspanin-4 OS=Arabidopsis thaliana GN=TET4 PE=3 SV=1
Length = 327
Score = 378 bits (970), Expect = e-104, Method: Compositional matrix adjust.
Identities = 204/277 (73%), Positives = 234/277 (84%)
Query: 1 MRNSNHLIGLLNFFTFLLSIPIIGGGIWLSSRANNTDCLKFLQWPLIVIGVSIMVVSLAG 60
MR+ ++LIGL+NFFTFLLSIPI+GGGIWLSSRAN+TDCL+FLQWPLI+IG+SIMV+SLAG
Sbjct: 1 MRSRSNLIGLINFFTFLLSIPILGGGIWLSSRANSTDCLRFLQWPLIIIGISIMVISLAG 60
Query: 61 FAGACYRNTHLMRFYLFVMFFIIAALIGFIIFAYAVTDKGSGRPVMDRAYSEYHLEDYSG 120
AGACY+N LM YLF MFF+IAALIGF IFAY VTDKGSGR VM+R Y +Y+L DYSG
Sbjct: 61 IAGACYQNKFLMWLYLFTMFFVIAALIGFTIFAYVVTDKGSGRFVMNRRYLDYYLNDYSG 120
Query: 121 WLKDRVTDDSYWGKISSCIRDSKVCPKMRRVINGAPETADMFSLRKLNPVQSGCCKPPAD 180
WLKDRVTD+ YW I SC+RDS VC K+ R +NG PETA MF R L+PV+SGCCKPP D
Sbjct: 121 WLKDRVTDNGYWRDIGSCVRDSGVCKKIGRDLNGVPETAHMFYFRNLSPVESGCCKPPTD 180
Query: 181 CGFVYENETLWNPGGGLVGSNPDCTRWSNDQEQLCYQCDSCKAGVLASLKKSWRKVSVIN 240
CG+ Y NET+W PGG +VG NPDC W+NDQ LCYQC SCKAGVL SLKKSWRKVSVIN
Sbjct: 181 CGYTYVNETVWIPGGEMVGPNPDCMLWNNDQRLLCYQCSSCKAGVLGSLKKSWRKVSVIN 240
Query: 241 IVVLIILVIFYVIGCAAFRNNRRIDNDEPYGEARMTK 277
IVV+IILVIFYVI CAA++N +R+ NDEP GEARMT
Sbjct: 241 IVVVIILVIFYVIACAAYQNVKRMYNDEPVGEARMTN 277
>sp|Q9M0B7|TET9_ARATH Tetraspanin-9 OS=Arabidopsis thaliana GN=TET9 PE=2 SV=1
Length = 272
Score = 263 bits (672), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 126/273 (46%), Positives = 175/273 (64%), Gaps = 8/273 (2%)
Query: 1 MRNSNHLIGLLNFFTFLLSIPIIGGGIWLSSRANNTDCLKFLQWPLIVIGVSIMVVSLAG 60
+R SN L+G+LNFF FLLS+PI+ GIWLS +A T C +FL P+I +GV +M++++AG
Sbjct: 2 VRFSNSLVGILNFFVFLLSVPILSTGIWLSLKAT-TQCERFLDKPMIALGVFLMIIAIAG 60
Query: 61 FAGACYRNTHLMRFYLFVMFFIIAALIGFIIFAYAVTDKGSGRPVMDRAYSEYHLEDYSG 120
G+C R T L+ YLFVMFF+I ++ F IFA+ VT KGSG + +AY EY LE YS
Sbjct: 61 VVGSCCRVTWLLWSYLFVMFFLILIVLCFTIFAFVVTSKGSGETIQGKAYKEYRLEAYSD 120
Query: 121 WLKDRVTDDSYWGKISSCIRDSKVCPKMRRVINGAPETADMFSLRKLNPVQSGCCKPPAD 180
WL+ RV + +W I SC+ +SK C + V A T F L +SGCCKP D
Sbjct: 121 WLQRRVNNAKHWNSIRSCLYESKFCYNLELVT--ANHTVSDFYKEDLTAFESGCCKPSND 178
Query: 181 CGFVYENETLWNPGGGLVGSNPDCTRWSNDQEQLCYQCDSCKAGVLASLKKSWRKVSVIN 240
C F Y T WN G N DC W N++ +LCY C +CKAG L +LK +W++V+++N
Sbjct: 179 CDFTYITSTTWNKTSG-THKNSDCQLWDNEKHKLCYNCKACKAGFLDNLKAAWKRVAIVN 237
Query: 241 IVVLIILVIFYVIGCAAFRNNRRIDNDEPYGEA 273
I+ L++LV+ Y +GC AFRNN+ ++ YG +
Sbjct: 238 IIFLVLLVVVYAMGCCAFRNNK----EDRYGRS 266
>sp|Q8S8Q6|TET8_ARATH Tetraspanin-8 OS=Arabidopsis thaliana GN=TET8 PE=2 SV=1
Length = 273
Score = 261 bits (668), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 129/271 (47%), Positives = 177/271 (65%), Gaps = 4/271 (1%)
Query: 2 RNSNHLIGLLNFFTFLLSIPIIGGGIWLSSRANNTDCLKFLQWPLIVIGVSIMVVSLAGF 61
R SN+L+G+LNF FLLSIPI+ GGIWLS + + T+C +FL P+I +GV +MVV++AG
Sbjct: 3 RCSNNLVGILNFLVFLLSIPILAGGIWLSQKGS-TECERFLDKPVIALGVFLMVVAIAGL 61
Query: 62 AGACYRNTHLMRFYLFVMFFIIAALIGFIIFAYAVTDKGSGRPVMDRAYSEYHLEDYSGW 121
G+C R T L+ YLFVMF +I + +FA+ VT+KG+G + + Y EY L DYS W
Sbjct: 62 IGSCCRVTWLLWVYLFVMFLLILLVFCITVFAFVVTNKGAGEAIEGKGYKEYKLGDYSTW 121
Query: 122 LKDRVTDDSYWGKISSCIRDSKVCPKMRRVINGAPETADMFSLRKLNPVQSGCCKPPADC 181
L+ RV + W KI SC+ +SKVC K+ P + F L +QSGCCKP +C
Sbjct: 122 LQKRVENGKNWNKIRSCLVESKVCSKLEAKFVNVP--VNSFYKEHLTALQSGCCKPSDEC 179
Query: 182 GFVYENETLWNPGGGLVGSNPDCTRWSNDQEQLCYQCDSCKAGVLASLKKSWRKVSVINI 241
GF Y N T W +NPDC W N +E+LC+ C SCKAG+L ++K +W+KV+++NI
Sbjct: 180 GFEYVNPTTWTKNTTGTHTNPDCQTWDNAKEKLCFDCQSCKAGLLDNVKSAWKKVAIVNI 239
Query: 242 VVLIILVIFYVIGCAAFRNNRRIDN-DEPYG 271
V L+ L+I Y +GC AFRNN+R D+ YG
Sbjct: 240 VFLVFLIIVYSVGCCAFRNNKRDDSYSRTYG 270
>sp|Q9SUD4|TET7_ARATH Tetraspanin-7 OS=Arabidopsis thaliana GN=TET7 PE=2 SV=1
Length = 263
Score = 256 bits (654), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 128/260 (49%), Positives = 166/260 (63%), Gaps = 4/260 (1%)
Query: 4 SNHLIGLLNFFTFLLSIPIIGGGIWLSSRANNTDCLKFLQWPLIVIGVSIMVVSLAGFAG 63
SN+L+G+LNFFTFLLSIPI+ GIWL A T+C +FL P++V+G+ +M VS+AG G
Sbjct: 5 SNNLLGILNFFTFLLSIPILSAGIWLGKNAA-TECERFLDKPMVVLGIFLMFVSIAGLVG 63
Query: 64 ACYRNTHLMRFYLFVMFFIIAALIGFIIFAYAVTDKGSGRPVMDRAYSEYHLEDYSGWLK 123
AC R + L+ YLF MF +I F IFA+AVT++G+G + DR Y EYH+ DYS WL+
Sbjct: 64 ACCRVSCLLWLYLFAMFLLILLGFCFTIFAFAVTNRGAGEVISDRGYKEYHVADYSNWLQ 123
Query: 124 DRVTDDSYWGKISSCIRDSKVCPKMRRVINGAPETADMFSLRKLNPVQSGCCKPPADCGF 183
RV + W +I SC+ S VC R A + F LN +QSGCCKP DC F
Sbjct: 124 KRVNNAKNWERIRSCLMYSDVCSTYR--TRYASINVEDFYKSNLNALQSGCCKPSNDCNF 181
Query: 184 VYENETLWNPGGGLVGSNPDCTRWSNDQEQLCYQCDSCKAGVLASLKKSWRKVSVINIVV 243
Y N T W G N DC W N LCY C++CKAG+L ++K SW+KV+ +NIV
Sbjct: 182 TYVNPTTWTKTPGPY-KNEDCNVWDNKPGTLCYDCEACKAGLLDNIKNSWKKVAKVNIVF 240
Query: 244 LIILVIFYVIGCAAFRNNRR 263
LI L+I Y +GC AFRNNR+
Sbjct: 241 LIFLIIVYSVGCCAFRNNRK 260
>sp|Q9C7C1|TET6_ARATH Tetraspanin-6 OS=Arabidopsis thaliana GN=TET6 PE=2 SV=1
Length = 282
Score = 223 bits (568), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 130/280 (46%), Positives = 166/280 (59%), Gaps = 19/280 (6%)
Query: 2 RNSNHLIGLLNFFTFLLSIPIIGGGIWLSSRANNTDCLKFLQWPLIVIGVSIMVVSLAGF 61
R SN +IG+LN T L SIPIIG ++ + ++T C FLQ PL+VIG I++VSLAGF
Sbjct: 3 RFSNTVIGVLNLLTLLASIPIIGTALYKAR--SSTTCENFLQTPLLVIGFIILIVSLAGF 60
Query: 62 AGACYRNTHLMRFYLFVMFFIIAALIGFIIFAYAVTDKGSGRPVMDRAYSEYHLEDYSGW 121
GAC+ + YL VM F+IA L+G +F VT +G G V R Y EY L DY W
Sbjct: 61 IGACFNVAWALWVYLVVMIFLIATLMGLTLFGLVVTSQGGGVEVPGRIYKEYRLGDYHPW 120
Query: 122 LKDRVTDDSYWGKISSCIRDSKVCPKMRRVINGAPETADMFSLRKLNPVQSGCCKPPADC 181
L++RV D YW I SCI SK C K+ + T D F R + VQSGCCKPP C
Sbjct: 121 LRERVRDPEYWNSIRSCILSSKTCTKIE-----SWTTLDYFQ-RDMTSVQSGCCKPPTAC 174
Query: 182 GFVYENETLWNPGGGLVGSNPDCTRWSNDQEQLCYQCDSCKAGVLASLKKSWRKVSVINI 241
YE G+V DC RW+N E LCY+CD+CKAGVL ++ WRK+SV+NI
Sbjct: 175 --TYE--------AGVVDGGGDCFRWNNGVEMLCYECDACKAGVLEEIRLDWRKLSVVNI 224
Query: 242 VVLIILVIFYVIGCAAFRNNRRIDND-EPYGEARMTKSRP 280
+VL++L+ Y GC AF N R + P + RMT+ RP
Sbjct: 225 LVLVLLIAVYAAGCCAFHNTRHAAHPYHPSDDNRMTRVRP 264
>sp|Q9ZUN5|TET2_ARATH Tetraspanin-2 OS=Arabidopsis thaliana GN=TET2 PE=2 SV=1
Length = 270
Score = 217 bits (553), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 120/273 (43%), Positives = 169/273 (61%), Gaps = 7/273 (2%)
Query: 1 MRNSNHLIGLLNFFTFLLSIPIIGGGIWLSSRANNTDCLKFLQWPLIVIGVSIMVVSLAG 60
M +N+L +LN L SIPI GIWL+S+ +N +C+ L+WP++V+GV I+VVS G
Sbjct: 1 MALANNLTAILNLLALLCSIPITASGIWLASKPDN-ECVNLLRWPVVVLGVLILVVSATG 59
Query: 61 FAGACYRNTHLMRFYLFVMFFIIAALIGFIIFAYAVTDKGSGRPVMDRAYSEYHLEDYSG 120
F GA L+ YL M +I L+ +IFA+ VT V R Y EY LE +S
Sbjct: 60 FIGAYKYKETLLAVYLCCMAILIGLLLVVLIFAFVVTRPDGSYRVPGRGYKEYRLEGFSN 119
Query: 121 WLKDRVTDDSYWGKISSCIRDSKVCPKMRRVINGAPETADMFSLRKLNPVQSGCCKPPAD 180
WLK+ V D WG++ +C+ D+ VCPK+ + A + FS K+ P+QSGCCKPP
Sbjct: 120 WLKENVVDSKNWGRLRACLADTNVCPKLNQEFITADQ---FFSSSKITPLQSGCCKPPTA 176
Query: 181 CGFVYENETLW-NPGGGLVGSNPDCTRWSNDQEQLCYQCDSCKAGVLASLKKSWRKVSVI 239
CG+ + N TLW NP + ++ DC WSNDQ QLCY C+SCKAG+L +L+K WRK ++I
Sbjct: 177 CGYNFVNPTLWLNPTN--MAADADCYLWSNDQSQLCYNCNSCKAGLLGNLRKEWRKANLI 234
Query: 240 NIVVLIILVIFYVIGCAAFRNNRRIDNDEPYGE 272
I+ +++L+ YVI C+AFRN + D Y +
Sbjct: 235 LIITVVVLIWVYVIACSAFRNAQTEDLFRKYKQ 267
>sp|Q9FIQ5|TRN2_ARATH Protein TORNADO 2 OS=Arabidopsis thaliana GN=TRN2 PE=1 SV=1
Length = 269
Score = 216 bits (550), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 125/273 (45%), Positives = 167/273 (61%), Gaps = 6/273 (2%)
Query: 1 MRNSNHLIGLLNFFTFLLSIPIIGGGIWLSSRANNTDCLKFLQWPLIVIGVSIMVVSLAG 60
M SN++IG +NF T LLSIP+IG GIWL+ N+ C+K LQWP+I++GV I++V LAG
Sbjct: 1 MPLSNNVIGCINFITVLLSIPVIGAGIWLAIGTVNS-CVKLLQWPVIILGVLILLVGLAG 59
Query: 61 FAGACYRNTHLMRFYLFVMFFIIAALIGFIIFAYAVTDKGSGRPVMDRAYSEYHLEDYSG 120
F G +R T L+ YL M +I L + F Y VT +GSG P RAY EY L+D+SG
Sbjct: 60 FIGGFWRITWLLVVYLIAMLILIVLLGCLVGFIYMVTIRGSGHPEPSRAYLEYSLQDFSG 119
Query: 121 WLKDRVTDDSYWGKISSCIRDSKVCPKMRRVINGAPETADMFSLRKLNPVQSGCCKPPAD 180
WL+ RV W +I +C+ + +CP++ N A F L+P+QSGCCKPP
Sbjct: 120 WLRRRVQRSYKWERIRTCLSTTTICPEL----NQRYTLAQDFFNAHLDPIQSGCCKPPTK 175
Query: 181 CGFVYENETLWNPGGGLVGSNPDCTRWSNDQEQLCYQCDSCKAGVLASLKKSWRKVSVIN 240
CGF + N T W + ++ DC WSNDQ LCY CDSCKAG+LA++K W K +
Sbjct: 176 CGFTFVNPTYWISPIDM-SADMDCLNWSNDQNTLCYTCDSCKAGLLANIKVDWLKADIFL 234
Query: 241 IVVLIILVIFYVIGCAAFRNNRRIDNDEPYGEA 273
++ LI L+I Y+IGC AFRN D Y +
Sbjct: 235 LLALIGLIIVYIIGCCAFRNAETEDIFRKYKQG 267
>sp|Q84WF6|TET5_ARATH Tetraspanin-5 OS=Arabidopsis thaliana GN=TET5 PE=2 SV=1
Length = 281
Score = 213 bits (543), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 116/284 (40%), Positives = 169/284 (59%), Gaps = 18/284 (6%)
Query: 2 RNSNHLIGLLNFFTFLLSIPIIGGGIWLSSRANNTDCLKFLQWPLIVIGVSIMVVSLAGF 61
R SN +IG LN T + SI ++G +W+ + T C FLQ PL+++G++I+++S+AG
Sbjct: 3 RMSNTVIGFLNILTLISSIVLLGSALWMGR--SKTTCEHFLQKPLLILGLAILILSVAGL 60
Query: 62 AGACYRNTHLMRFYLFVMFFIIAALIGFIIFAYAVTDKGSGRPVMDRAYSEYHLEDYSGW 121
GAC ++ YLF M FII AL+G +F + VT G V R Y E+ LE Y W
Sbjct: 61 VGACCDVAWVLWVYLFFMVFIIVALMGLTLFGFIVTSHSGGVVVDGRVYKEFKLEAYHPW 120
Query: 122 LKDRVTDDSYWGKISSCIRDSKVCPKMRRVINGAPETADMFSLRKLNPVQSGCCKPPADC 181
LK RV D +YW I +C+ S C K+ A T + + L+P+QSGCCKPP C
Sbjct: 121 LKTRVVDTNYWVTIKTCLLGSVTCSKL------ALWTPLDYLQKDLSPLQSGCCKPPTSC 174
Query: 182 GFVYENETLWNPGGGLVGSNPDCTRWSNDQEQLCYQCDSCKAGVLASLKKSWRKVSVINI 241
VY +T ++ +PDC RW+N LCY CD+C+AGVL ++++ W K+S++N+
Sbjct: 175 --VYNTDT-------VIQQDPDCYRWNNAATVLCYDCDTCRAGVLETVRRDWHKLSLVNV 225
Query: 242 VVLIILVIFYVIGCAAFRNNRRIDN-DEPYGEARMTKSRPSRIQ 284
+V+I L+ Y +GC AF+N +R + PYG M+KSRP Q
Sbjct: 226 IVVIFLIAVYCVGCCAFKNAKRPQHYGFPYGRYGMSKSRPGWEQ 269
>sp|Q9LPR6|TET11_ARATH Tetraspanin-11 OS=Arabidopsis thaliana GN=TET11 PE=2 SV=1
Length = 271
Score = 206 bits (525), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 108/264 (40%), Positives = 151/264 (57%), Gaps = 6/264 (2%)
Query: 2 RNSNHLIGLLNFFTFLLSIPIIGGGIWLSSRANNTDCLKFLQWPLIVIGVSIMVVSLAGF 61
R SN ++GL N L+ IG I++ TDC ++ PL+ G+ + +VSL G
Sbjct: 3 RVSNFMVGLANTLVMLVGASAIGYSIYMFVHQGVTDCESAIRIPLLTTGLILFLVSLLGV 62
Query: 62 AGACYRNTHLMRFYLFVMFFIIAALIGFIIFAYAVTDKGSGRPVMDRAYSEYHLEDYSGW 121
G+C++ M YL ++F I AL+ F IF + VT+KG+GR V R Y EY D+S W
Sbjct: 63 IGSCFKENLAMVSYLIILFGGIVALMIFSIFLFFVTNKGAGRVVSGRGYKEYRTVDFSTW 122
Query: 122 LKDRVTDDSYWGKISSCIRDSKVCPKMRRVINGAPETADMFSLRKLNPVQSGCCKPPADC 181
L V W I SC+ ++ VC + + AD F + L+P+QSGCCKPP+DC
Sbjct: 123 LNGFV-GGKRWVGIRSCLAEANVCDDLSD--GRVSQIADAFYHKNLSPIQSGCCKPPSDC 179
Query: 182 GFVYENETLWNP---GGGLVGSNPDCTRWSNDQEQLCYQCDSCKAGVLASLKKSWRKVSV 238
F + N T W P V N DC WSN Q +LC+ C++CKAGVLA++++ WR + V
Sbjct: 180 NFEFRNATFWIPPSKNETAVAENGDCGTWSNVQTELCFNCNACKAGVLANIREKWRNLLV 239
Query: 239 INIVVLIILVIFYVIGCAAFRNNR 262
NI +LI+L+ Y GC A RNNR
Sbjct: 240 FNICLLILLITVYSCGCCARRNNR 263
>sp|F4I214|TET10_ARATH Tetraspanin-10 OS=Arabidopsis thaliana GN=TET10 PE=2 SV=1
Length = 284
Score = 178 bits (452), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 88/271 (32%), Positives = 152/271 (56%), Gaps = 14/271 (5%)
Query: 1 MRNSNHLIGLLNFFTFLLSIPIIGGGIWLSSRANNTDCLKFLQWPLIVIGVSIMVVSLAG 60
M S +I +N T LL++ +I G+W+S+ +N C + L +P+I +G I ++S+ G
Sbjct: 3 MGTSTFVIRWVNLLTMLLAVAVIIFGVWMST--HNDGCRRSLTFPVIALGGFIFLISIIG 60
Query: 61 FAGACYRNTHLMRFYLFVMFFIIAALIGFIIFAYAVTDKGSGRPVMDRAYSEYHLEDYSG 120
F GAC R+ L+ YL V+ ++ A++ F + A+ VT+ GSG Y EY L DYS
Sbjct: 61 FLGACKRSVALLWIYLAVLLIVLIAILVFTVLAFIVTNNGSGHTNPGLRYKEYKLNDYSS 120
Query: 121 WLKDRVTDDSYWGKISSCIRDSKVCPKMRRVINGAPETADMFSLRKLNPVQSGCCKPPAD 180
W ++ + S W ++ SC+ S+ C K+ + +T +L P+++GCC+PP++
Sbjct: 121 WFLKQLNNTSNWIRLKSCLVKSEQCRKLSK----KYKTIKQLKSAELTPIEAGCCRPPSE 176
Query: 181 CGFVYENETLWNPGGGLVGSNPDCTRWSNDQEQLCYQCDSCKAGVLASLKKSWRKVSVIN 240
CG+ N + ++ + SN DC + N + CY CDSCKAGV +K WR V++ N
Sbjct: 177 CGYPAVNASYYDLSFHSISSNKDCKLYKNLRTIKCYNCDSCKAGVAQYMKTEWRLVAIFN 236
Query: 241 IVVLIILVIFYVIGCAAFRNNRRIDNDEPYG 271
+V+ ++L+ + + R D+++ +G
Sbjct: 237 VVLFVVLISSLL--------STRFDSEQSFG 259
>sp|Q9FN51|TET12_ARATH Tetraspanin-12 OS=Arabidopsis thaliana GN=TET12 PE=2 SV=1
Length = 264
Score = 128 bits (322), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 84/263 (31%), Positives = 133/263 (50%), Gaps = 9/263 (3%)
Query: 1 MRNSNHLIGLLNFFTFLLSIPIIGGGIWLSSRANNTDCLKFLQWPLIVIGVSIMVVSLAG 60
+R SN + N L+ + + +++ + + C +F+Q PLIV + +S G
Sbjct: 2 LRLSNAAVITTNAILALIGLAALSFSVYVYVQGP-SQCQRFVQNPLIVTAALLFFISSLG 60
Query: 61 FAGACYRNTHLMRFYLFVMFFIIAALIGFIIFAYAVTDKGSGRPVMDRAYSEYHLEDYSG 120
A Y + ++ YLF +F I L+ +F + VT+ +G+ + R DY
Sbjct: 61 LIAALYGSHIIITLYLFFLFLSILLLLVLSVFIFLVTNPTAGKALSGRGIGNVKTGDYQN 120
Query: 121 WLKDRVTDDSYWGKISSCIRDSKVCPKMRRVINGAPETADMFSLRKLNPVQSGCCKPPAD 180
W+ + W I+ C+ DS+VC + P D F + L+ VQ GCC+PP +
Sbjct: 121 WIGNHFLRGKNWEGITKCLSDSRVCKRF------GPRDID-FDSKHLSNVQFGCCRPPVE 173
Query: 181 CGFVYENETLWN-PGGGLVGSNPDCTRWSNDQEQLCYQCDSCKAGVLASLKKSWRKVSVI 239
CGF +N T W P DC WSN Q QLCY C+SCK GVL ++K WR + V+
Sbjct: 174 CGFESKNATWWTVPATATTAIIGDCKAWSNTQRQLCYACESCKIGVLKGIRKRWRILIVV 233
Query: 240 NIVVLIILVIFYVIGCAAFRNNR 262
N+++++++V Y GC +NNR
Sbjct: 234 NLLLILLVVFLYSCGCCVRKNNR 256
>sp|Q9SI56|TET13_ARATH Tetraspanin-13 OS=Arabidopsis thaliana GN=TET13 PE=3 SV=1
Length = 278
Score = 127 bits (320), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 112/241 (46%), Gaps = 16/241 (6%)
Query: 16 FLLS--IPIIGGGIW----LSSRANNTDCLKFLQWPLIVIGVSIMVVSLAGFAGACYRNT 69
FL+S I ++ W ++ +C +F+ P I I S++ +SL GF A +++
Sbjct: 27 FLISSAIFLVTAAFWFVAVMTLHYRTDECNRFVTTPGIFISFSLLAMSLTGFYAAYFKSD 86
Query: 70 HLMRFYLFVMFFIIAALIGFIIFAYAVTDKGSGRPVMDRAYSEYHLEDYSGWLKDRVTDD 129
L R + F+ F + ++ IF + + + R E+ EDYSGW+ V D
Sbjct: 87 CLFRIHFFIFFLWMFVVVSKAIFVIFLHKETNPRLFPGTKIYEFRYEDYSGWVSRLVIKD 146
Query: 130 SYWGKISSCIRDSKVCPKMRRVINGAPETADMFSLRKLNPVQSGCCKPPADCGFVYENET 189
W + C+ VC ++ + A F L P+QSGCCKPP CG YE
Sbjct: 147 DEWYRTRRCLVKDNVCNRLNHKM-----PASEFYQMNLTPIQSGCCKPPLSCGLNYEKPN 201
Query: 190 LWNPGGGLVGSNPDCTRWSNDQEQLCYQCDSCKAGVLASLKKSWRKVSVINIVVLIILVI 249
W DC RW+N + LC+ CDSCKA ++A + + +I V II +I
Sbjct: 202 NWTVSRYYNNLEVDCKRWNNSADTLCFDCDSCKAVIIADVHN-----TSFSITVNIIHII 256
Query: 250 F 250
F
Sbjct: 257 F 257
>sp|Q1PDI1|TET15_ARATH Tetraspanin-15 OS=Arabidopsis thaliana GN=TET15 PE=2 SV=1
Length = 317
Score = 96.3 bits (238), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 117/261 (44%), Gaps = 31/261 (11%)
Query: 9 GLLNFFTFLLSIPIIGGGIWLSSRANNTDCLKFLQWPLIVIGVSIMVVSLAGFAGACYRN 68
G+L FTF+LS+ ++G +WL + DC L P + S+ ++++ + A
Sbjct: 60 GVLPIFTFVLSLTLLGYAVWLLY-MRSYDCEDILGLPRVQTLASVGLLAVFVVSNAALFL 118
Query: 69 THLMRFYLFVMFFIIAALIGFIIFAYAVTDKGSGRPVMDRAYSEYHLEDYSGWLKDRVTD 128
V+ ++ L+ FI AYA ++ R W K ++ D
Sbjct: 119 RRKFPMPALVVMVVVLLLMLFIGLAYAGVNEMQSR----------RFPATRMWFKLKIMD 168
Query: 129 DSY-WGKISSCIRDSKVCPKMRRVINGAPETADMFSLRKLNPVQSGCCKPPADCGFVYEN 187
D W I SC+ D C +I G+P ++ RK+ P+++GCC PP C N
Sbjct: 169 DHVTWNNIKSCVYDKGAC---NDLIYGSPNEKP-YNRRKMPPIKNGCCMPPETCNMDAIN 224
Query: 188 ETLW------NPGGGL---------VGSNPDCTRWSNDQEQLCYQCDSCKAGVLASLKKS 232
T W P + VG DC W ND LCY C SCK G + S+++
Sbjct: 225 ATFWYRRKDEGPPSSMNLMYGDEMMVGRISDCQLWRNDWSILCYDCRSCKFGFIRSVRRK 284
Query: 233 WRKVSVINIVVLIILVIFYVI 253
W ++ + IV+ I+L++ +++
Sbjct: 285 WWQLGIFLIVISILLLMSHLL 305
>sp|Q5BQ04|TET16_ARATH Tetraspanin-16 OS=Arabidopsis thaliana GN=TET16 PE=2 SV=1
Length = 248
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/270 (20%), Positives = 100/270 (37%), Gaps = 45/270 (16%)
Query: 9 GLLNFFTFLL-SIPIIGGGIWLSSRANNTDCLKFLQWPLIVIGVSIMVVSLAGFAGACYR 67
G L T +L I + G L R + C++ +VIG+ ++V+ C
Sbjct: 7 GFLTMATIILICIGLTMTGTGLYYRKTVSKCIRETDGSFVVIGLLLLVIPQFALYAICCH 66
Query: 68 NTHLMRFYLFVMFFIIAALIGFII--FAYAVTDKGSGRPVMDRAYSEYHLEDYSGWLKDR 125
+ + Y++ M F+ L G+ + F Y T + P ++ ++ L R
Sbjct: 67 SKRMFTIYIYAMIFVSIVLGGYSLKCFIYNTTFGIAKNPAEEKRTAK--------QLVGR 118
Query: 126 VTDDSYWGKISSCIRDSKVCPKMRRVINGAPETADMFSLRKLNPVQSGCCKPPADCG--- 182
+ +S K++ CI + C F+ + + V CC P CG
Sbjct: 119 LVPESKLAKVTECIIHNHDCN---------------FNASQNSNVWRYCCAQPRGCGVTT 163
Query: 183 -FVYENETLWNPGGGLVGSNPDCTRWSNDQEQLCYQCDSCKAGVLASLKKSWRKVSVINI 241
F E W +C+ + C C C+ +L ++ W+ +S+ +
Sbjct: 164 MFGQPGEWSWKHQHVENHVPEECSY------EYCLSCRGCQMSILKAIVHQWKYLSMFSY 217
Query: 242 VVLIILVIFYVIGCAAFRNNRRIDN--DEP 269
L ++ C + +R I + DEP
Sbjct: 218 PALFLV-------CLSLAISRSIMDTFDEP 240
>sp|Q58G33|TET14_ARATH Tetraspanin-14 OS=Arabidopsis thaliana GN=TET14 PE=2 SV=1
Length = 260
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 96/242 (39%), Gaps = 37/242 (15%)
Query: 15 TFLLSIPIIGGGIWLSSRANNTDCLKFLQWPL----IVIGVSIMVVSLAGFAGACYRNTH 70
TF LS P++G ++L N+ + Q L ++ VS++ + L G R
Sbjct: 21 TFFLSAPLVGHALYLFCMRNDHVYYRDFQSTLPRVQTLVSVSLLALFLLSNIGMFLRPRR 80
Query: 71 LMRFYLFVMFFIIAALIGFIIFAYAVTDKGSGRPVMDRAYSEYHLEDYSGWLKDRVTDDS 130
L ++L ++FFI A G + + S P+ + +Y+ +R T+
Sbjct: 81 L-SYFLVIVFFIGFAYSGVYKME---SRRFSPTPMCFKG-------EYNNGQGERKTEQY 129
Query: 131 YWGKISSCIRDSKVCPKMRRVINGAPETADMFSLRKLNPVQSGCCKPPADCGFVYENETL 190
KI ++ R +N + R L V++GCC P +C N TL
Sbjct: 130 QVVKIEQS--QGRLQRVHLRFVNSY--ALPPYDRRLLPSVKTGCCNRPGNCKLETVNATL 185
Query: 191 W---NPGGGLV---------GSNPDCT----RWSNDQEQLCYQCDSCKAGVLAS--LKKS 232
W N G + G N D W ++ L Y C +C+ ++ S L+K
Sbjct: 186 WVTRNREGPPLETAMIYDRYGGNADIKDYYDMWRHELSVLYYDCMTCQVRIIKSPRLRKW 245
Query: 233 WR 234
W+
Sbjct: 246 WQ 247
>sp|Q135S8|Y2934_RHOPS UPF0391 membrane protein RPD_2934 OS=Rhodopseudomonas palustris
(strain BisB5) GN=RPD_2934 PE=3 SV=1
Length = 57
Score = 37.7 bits (86), Expect = 0.091, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 39 LKFLQWPLIVIGVSIMVVSLAGFAGACYRNTHLMR--FYLFVMFFIIAALIGFIIF 92
+ L+W LI + +S+ V + GF G + L R FY+F FI+ ++GF IF
Sbjct: 1 MTILKWALIFLVISV-VAGIFGFTGVSAASADLARILFYIFAAIFIVLLILGFTIF 55
>sp|Q2IX45|Y2510_RHOP2 UPF0391 membrane protein RPB_2510 OS=Rhodopseudomonas palustris
(strain HaA2) GN=RPB_2510 PE=3 SV=1
Length = 57
Score = 37.4 bits (85), Expect = 0.12, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 39 LKFLQWPLIVIGVSIMVVSLAGFAGACYRNTHLMR--FYLFVMFFIIAALIGFIIF 92
+ L+W LI + +S+ + + GF G + L R FY+F + FI+ ++GF IF
Sbjct: 1 MTILKWALIFLVISV-IAGIFGFTGISAASADLARILFYIFAVIFIVLLILGFTIF 55
>sp|Q89IC2|Y5717_BRAJA UPF0391 membrane protein bsl5717 OS=Bradyrhizobium japonicum
(strain USDA 110) GN=bsl5717 PE=3 SV=1
Length = 57
Score = 36.2 bits (82), Expect = 0.29, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 39 LKFLQWPLIVIGVSIMVVSLAGFAGACYRNTHLMRF--YLFVMFFIIAALIGFIIF 92
+ L+W LI + VSI V + GF G + + RF Y+FV+ F++ ++G IF
Sbjct: 1 MTILKWALIFLLVSI-VAGVLGFTGISAASADIARFLFYVFVVIFLVLLILGLTIF 55
>sp|Q58G35|TET17_ARATH Tetraspanin-17 OS=Arabidopsis thaliana GN=TET17 PE=2 SV=1
Length = 248
Score = 35.4 bits (80), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 54/276 (19%), Positives = 98/276 (35%), Gaps = 53/276 (19%)
Query: 9 GLLNFFTFLL-SIPIIGGGIWLSSRANNTDCLKFLQWPLIVIGVSIMVVSLAGFAGACYR 67
G L T +L SI + G L + + C++ ++G+ ++++ G G C R
Sbjct: 7 GFLTMTTIILISIGLTMMGTGLYQKTTMSSCIRETSSQFTLLGLLLLLIPQIGLYGICCR 66
Query: 68 NTHLMRFYLF--VMFFIIAALIGFIIFAYAVTDKGSGRPVMD-RAYSEYHLEDYSGWLKD 124
+ L F+ + V+ II + Y T + P D R + L
Sbjct: 67 SKRLFNFFFYGMVVLIIIVSYYSIKCSIYNTTFGIAKNPAKDNRTVPQ---------LLG 117
Query: 125 RVTDDSYWGKISSCIRDSKVCPKMRRVINGAPETADMFSLRKLNPVQSGCCKPPADCGFV 184
R+ + K++ CI C ++ K + V CC P CG +
Sbjct: 118 RLVSKEKFEKVTYCIIHKHDCN---------------YNASKNSNVWKYCCAQPVGCGTI 162
Query: 185 YENETLWNPGGGLVGSNPDCTRWSNDQE----------QLCYQCDSCKAGVLASLKKSWR 234
T+++ G W + E + C C C+ +L ++ W+
Sbjct: 163 ----TMFDKPGEW--------SWKHQYERNQVPEECSYEYCLDCRGCQLSILKAIVHQWK 210
Query: 235 KVSVINIVVLIILVIFYVIGCAAFRNNRRIDNDEPY 270
+S+ L++ I I A+ I +E Y
Sbjct: 211 YLSMFAYPALVLSCISLAI---AWSLKETIHENEDY 243
>sp|Q922J6|TSN2_MOUSE Tetraspanin-2 OS=Mus musculus GN=Tspan2 PE=1 SV=1
Length = 221
Score = 34.7 bits (78), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 64/165 (38%), Gaps = 24/165 (14%)
Query: 1 MRNSNHLIGLLNFFTFLLSIPIIGGGIW---------LSSRANNTDCLKFLQWPLIVIGV 51
+R +L+ N +L +I G+W LSS + + + L+ G
Sbjct: 8 LRCIKYLLLGFNLLFWLAGSAVIAFGLWFRFGGTMKDLSSEDKSPEYFYVGLYVLVGAGA 67
Query: 52 SIMVVSLAGFAGACYRNTHLMRFYLFVMFFIIAALIGFIIFAYAVTDKGSGRPVMDRAYS 111
+M V G GA + ++ + + I AA + +FA+ G+ V R
Sbjct: 68 LMMTVGFFGCCGAMRESQCVLGSFFTCLLVIFAAEVTTGVFAFI------GKDVAIRHVQ 121
Query: 112 EYHLEDYSGWLKDRVTDD----SYWGKISSCIRDSK-----VCPK 147
+ E YS +LKDR + ++ C ++S CPK
Sbjct: 122 SMYEEAYSDYLKDRARGNGTLITFHSAFQCCGKESSEQVQPTCPK 166
>sp|Q17QJ5|TSN5_BOVIN Tetraspanin-5 OS=Bos taurus GN=TSPAN5 PE=2 SV=1
Length = 268
Score = 33.9 bits (76), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 49/98 (50%), Gaps = 13/98 (13%)
Query: 6 HLIGLLNFFTFLLSIPIIGGGIW-------LSSRANNTDCLKFLQ-WPLIVIGVSIMVVS 57
+ I N + L I +G G+W LS+ ++ TD F W +V+G + ++
Sbjct: 17 YFIFGFNVIFWFLGIAFLGIGLWAWNEKGVLSNISSITDLGGFDPVWLFLVVGGVMFILG 76
Query: 58 LAGFAGACYRNTHLMRF---YLFVMFF--IIAALIGFI 90
AG GA NT L++F +L ++FF + A ++ F+
Sbjct: 77 FAGCIGALRENTFLLKFFSVFLGIIFFLELTAGVLAFV 114
>sp|Q68VK5|TSN5_RAT Tetraspanin-5 OS=Rattus norvegicus GN=Tspan5 PE=2 SV=2
Length = 268
Score = 33.9 bits (76), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 49/98 (50%), Gaps = 13/98 (13%)
Query: 6 HLIGLLNFFTFLLSIPIIGGGIW-------LSSRANNTDCLKFLQ-WPLIVIGVSIMVVS 57
+ I N + L I +G G+W LS+ ++ TD F W +V+G + ++
Sbjct: 17 YFIFGFNVIFWFLGITFLGIGLWAWNEKGVLSNISSITDLGGFDPVWLFLVVGGVMFILG 76
Query: 58 LAGFAGACYRNTHLMRF---YLFVMFF--IIAALIGFI 90
AG GA NT L++F +L ++FF + A ++ F+
Sbjct: 77 FAGCIGALRENTFLLKFFSVFLGIIFFLELTAGVLAFV 114
>sp|P62080|TSN5_MOUSE Tetraspanin-5 OS=Mus musculus GN=Tspan5 PE=2 SV=1
Length = 268
Score = 33.9 bits (76), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 49/98 (50%), Gaps = 13/98 (13%)
Query: 6 HLIGLLNFFTFLLSIPIIGGGIW-------LSSRANNTDCLKFLQ-WPLIVIGVSIMVVS 57
+ I N + L I +G G+W LS+ ++ TD F W +V+G + ++
Sbjct: 17 YFIFGFNVIFWFLGITFLGIGLWAWNEKGVLSNISSITDLGGFDPVWLFLVVGGVMFILG 76
Query: 58 LAGFAGACYRNTHLMRF---YLFVMFF--IIAALIGFI 90
AG GA NT L++F +L ++FF + A ++ F+
Sbjct: 77 FAGCIGALRENTFLLKFFSVFLGIIFFLELTAGVLAFV 114
>sp|P62079|TSN5_HUMAN Tetraspanin-5 OS=Homo sapiens GN=TSPAN5 PE=2 SV=1
Length = 268
Score = 33.9 bits (76), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 49/98 (50%), Gaps = 13/98 (13%)
Query: 6 HLIGLLNFFTFLLSIPIIGGGIW-------LSSRANNTDCLKFLQ-WPLIVIGVSIMVVS 57
+ I N + L I +G G+W LS+ ++ TD F W +V+G + ++
Sbjct: 17 YFIFGFNVIFWFLGITFLGIGLWAWNEKGVLSNISSITDLGGFDPVWLFLVVGGVMFILG 76
Query: 58 LAGFAGACYRNTHLMRF---YLFVMFF--IIAALIGFI 90
AG GA NT L++F +L ++FF + A ++ F+
Sbjct: 77 FAGCIGALRENTFLLKFFSVFLGIIFFLELTAGVLAFV 114
>sp|Q18DN4|HMU_HALWD Halomucin OS=Haloquadratum walsbyi (strain DSM 16790) GN=hmu PE=4
SV=1
Length = 9159
Score = 33.5 bits (75), Expect = 1.6, Method: Composition-based stats.
Identities = 17/64 (26%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 106 MDRAYSEYHLEDYSGWLKDRVTDDSYWGKISSCIRDSKVCPKMRRVIN-GAPETADMFSL 164
+D Y+E + +DY+GW D+V + Y + DS + + I+ GAP +++ ++
Sbjct: 1031 LDENYAEINFDDYTGW-NDQVDNQGYLVEYGGLTTDSAITAQRNVTIDTGAPNVSNV-TI 1088
Query: 165 RKLN 168
R+++
Sbjct: 1089 RRID 1092
>sp|Q7NR81|DNLJ_CHRVO DNA ligase OS=Chromobacterium violaceum (strain ATCC 12472 / DSM
30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 / NCTC 9757)
GN=ligA PE=3 SV=1
Length = 821
Score = 33.5 bits (75), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 11 LNFFTFLLSIPIIGGGIWLSSRANNTDCLKFLQWPLIVIGVSIMVVSLAGFAG 63
L+FF + SI +GG W ++ A LK L +P+++ + +V AG AG
Sbjct: 247 LSFFAY--SIAQVGGADWPATHAGEMAWLKTLGFPVVMDSLRPVVSGAAGLAG 297
>sp|Q608X7|NUOA_METCA NADH-quinone oxidoreductase subunit A OS=Methylococcus capsulatus
(strain ATCC 33009 / NCIMB 11132 / Bath) GN=nuoA PE=3
SV=1
Length = 139
Score = 31.6 bits (70), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 21/33 (63%)
Query: 72 MRFYLFVMFFIIAALIGFIIFAYAVTDKGSGRP 104
+RFYL +FF+I L IFA+A+ + SG P
Sbjct: 66 VRFYLIAIFFVIFDLEAVFIFAWAIAFRESGWP 98
>sp|O43861|ATP9B_HUMAN Probable phospholipid-transporting ATPase IIB OS=Homo sapiens
GN=ATP9B PE=2 SV=4
Length = 1147
Score = 31.6 bits (70), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Query: 46 LIVIGVSIMVVSLAGFAGACYRNTHLMRFYLFVMFFIIAAL 86
L ++ +SI++V+L GF G YRN L RF L + I +L
Sbjct: 386 LALVALSIVMVTLQGFVGPWYRN--LFRFLLLFSYIIPISL 424
>sp|D4ABB8|ATP9B_RAT Probable phospholipid-transporting ATPase IIB OS=Rattus norvegicus
GN=Atp9b PE=2 SV=1
Length = 1147
Score = 31.2 bits (69), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 26/41 (63%), Gaps = 2/41 (4%)
Query: 46 LIVIGVSIMVVSLAGFAGACYRNTHLMRFYLFVMFFIIAAL 86
L ++ +S+++V+L GFAG YRN L RF L + I +L
Sbjct: 386 LALVVLSVVMVTLQGFAGPWYRN--LFRFLLLFSYIIPISL 424
>sp|P98195|ATP9B_MOUSE Probable phospholipid-transporting ATPase IIB OS=Mus musculus
GN=Atp9b PE=2 SV=4
Length = 1146
Score = 31.2 bits (69), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 26/41 (63%), Gaps = 2/41 (4%)
Query: 46 LIVIGVSIMVVSLAGFAGACYRNTHLMRFYLFVMFFIIAAL 86
L ++ +S+++V+L GFAG YRN L RF L + I +L
Sbjct: 385 LALVVLSVVMVTLQGFAGPWYRN--LFRFLLLFSYIIPISL 423
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.326 0.141 0.459
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 112,194,480
Number of Sequences: 539616
Number of extensions: 4709284
Number of successful extensions: 12967
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 49
Number of HSP's that attempted gapping in prelim test: 12881
Number of HSP's gapped (non-prelim): 91
length of query: 285
length of database: 191,569,459
effective HSP length: 116
effective length of query: 169
effective length of database: 128,974,003
effective search space: 21796606507
effective search space used: 21796606507
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 60 (27.7 bits)