BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 023214
(285 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P54120|AIG1_ARATH Protein AIG1 OS=Arabidopsis thaliana GN=AIG1 PE=2 SV=1
Length = 353
Score = 207 bits (527), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 98/164 (59%), Positives = 120/164 (73%), Gaps = 1/164 (0%)
Query: 8 DDWELTSPSNGERTVVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKD 67
D++ + P E +VLVGRTGNGKSATGNSI+ + FKS+ SSGVT C + V +
Sbjct: 32 DEFSASQPHPVE-NIVLVGRTGNGKSATGNSIVRSKVFKSKTKSSGVTMECHAVKAVTPE 90
Query: 68 GQVVNVIDTPGLFDFSAGSEFVGKEIVKCIGMAKDGIHAVLVVFSVRSRFSQEEEAALHS 127
G ++NVIDTPGLFD S +EF+GKEIVKC+ +A G+HAVL+V SVR+R SQEEE L +
Sbjct: 91 GPILNVIDTPGLFDLSVSAEFIGKEIVKCLTLADGGLHAVLLVLSVRTRISQEEEMVLST 150
Query: 128 LQTLFGKKIFDYMIVVFTGGDELEDNDETLEDYLGRECPKPLKK 171
LQ LFG KI DY+IVVFTGGD LED+ TLEDYLG P LK+
Sbjct: 151 LQVLFGSKIVDYLIVVFTGGDVLEDDGMTLEDYLGDNMPDFLKR 194
>sp|O81025|P2A03_ARATH Putative protein PHLOEM PROTEIN 2-LIKE A3 OS=Arabidopsis thaliana
GN=PP2A3 PE=4 SV=1
Length = 463
Score = 193 bits (490), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 112/273 (41%), Positives = 170/273 (62%), Gaps = 28/273 (10%)
Query: 20 RTVVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGL 79
+ +VLVGRTGNGKS+TGN++LG + FKS+ + GVT CEM R ++DG ++NVIDTPGL
Sbjct: 6 KNIVLVGRTGNGKSSTGNTLLGTKQFKSKNQAKGVTMICEMYRAAIQDGPIINVIDTPGL 65
Query: 80 FDFSAGSEFVGKEIVKCIGMAKDGIHAVLVVFSVRSRFSQEEEAALHSLQTLFGKKIFDY 139
D + + EI+ C+ MA++GIHAVL+V S R R S+EEE+ +++LQ +FG +I DY
Sbjct: 66 CDSFVPGDDISNEIINCLTMAEEGIHAVLLVLSARGRISKEEESTVNTLQCIFGSQILDY 125
Query: 140 MIVVFTGGDELEDNDETLEDYLGRECPKPLKKGATKLRDQQFEVDSLKGYSKREISELKE 199
IVVFTGGD+LE++D+TL+DY CP+ L K V L G ++ + + K
Sbjct: 126 CIVVFTGGDDLEEDDQTLDDYFRAGCPEFLTK-----------VLRLCG-GRKVLFDNKS 173
Query: 200 QMHKSYEDQLKRITEMVESKLKET-----TTRLEQQLAEEQAARLKAEEV---------A 245
+ K +Q+K++ VE+ ++T T +L +++ EE RL+ EE A
Sbjct: 174 KDEKKKVEQVKQLLARVENVGEQTGGIPYTYQLHRKIKEENDERLREEERVIESKNRAEA 233
Query: 246 QLAQMKSNDEIRKLRENLERAQRETEELRKQAE 278
+LA+M+ N + K E L+ + + ++L QAE
Sbjct: 234 ELAEMQQNLLMEK--EKLQMEEAKNKQLIAQAE 264
>sp|Q9NUV9|GIMA4_HUMAN GTPase IMAP family member 4 OS=Homo sapiens GN=GIMAP4 PE=1 SV=1
Length = 329
Score = 128 bits (322), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 91/284 (32%), Positives = 155/284 (54%), Gaps = 42/284 (14%)
Query: 15 PSNGERTVVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVI 74
P N + +VLVG+TG GKSATGNSILGR+ F S ++ +T CE + + K+ ++V V+
Sbjct: 26 PRNSQLRIVLVGKTGAGKSATGNSILGRKVFHSGTAAKSITKKCEKRSSSWKETELV-VV 84
Query: 75 DTPGLFDFSAGSEFVGKEIVKCIGMAKDGIHAVLVVFSVRSRFSQEEEAALHSLQTLFGK 134
DTPG+FD + KEI++CI + G HA+L+V + R+++EE A + +FG+
Sbjct: 85 DTPGIFDTEVPNAETSKEIIRCILLTSPGPHALLLVVPL-GRYTEEEHKATEKILKMFGE 143
Query: 135 KIFDYMIVVFTGGDELEDNDETLEDYLGRECPK--------------PLKKGATKLRDQQ 180
+ +MI++FT D+L D + L DYL RE P+ L AT +Q+
Sbjct: 144 RARSFMILIFTRKDDLGDTN--LHDYL-REAPEDIQDLMDIFGDRYCALNNKATGA-EQE 199
Query: 181 FEVDSLKGYSKREISELKE-----QMHKSYEDQLKRITEMVESKLKETTTRLEQQLAEEQ 235
+ L G +R + E KE +M++ E+++++ T+ ++ L + E +
Sbjct: 200 AQRAQLLGLIQRVVRENKEGCYTNRMYQRAEEEIQKQTQAMQE--------LHRVELERE 251
Query: 236 AARLKAEEVAQLAQMKSNDEIRKLRENLERAQRETEELRKQAEK 279
AR++ E ++IRKL + +E+ +R+ + +K AE+
Sbjct: 252 KARIREE---------YEEKIRKLEDKVEQEKRKKQMEKKLAEQ 286
>sp|Q8K3K9|GIMA4_RAT GTPase IMAP family member 4 OS=Rattus norvegicus GN=Gimap4 PE=2
SV=1
Length = 310
Score = 107 bits (268), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 60/158 (37%), Positives = 95/158 (60%), Gaps = 5/158 (3%)
Query: 22 VVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLFD 81
+VL+G+TG GKS+TGNSILGR+AF S + +T CE ++ DG+ + V+DTPG+FD
Sbjct: 33 IVLLGKTGAGKSSTGNSILGRKAFLSGICAKSITKVCEKGVSIW-DGKELVVVDTPGIFD 91
Query: 82 FSAGSEFVGKEIVKCIGMAKDGIHAVLVVFSVRSRFSQEEEAALHSLQTLFGKKIFDYMI 141
KEI +C+ + G HA+L+V + ++ EE A L ++F KK +MI
Sbjct: 92 TEVPDADTQKEITRCVALTSPGPHALLLVIPLGC-YTVEEHKATRKLLSMFEKKARRFMI 150
Query: 142 VVFTGGDELEDNDETLEDYLGRECPKPLKKGATKLRDQ 179
++ T D+LED D + +YL P+ L++ + R++
Sbjct: 151 LLLTRKDDLEDTD--IHEYL-ETAPEVLQELIYEFRNR 185
>sp|Q8K349|GIMA6_MOUSE GTPase IMAP family member 6 OS=Mus musculus GN=Gimap6 PE=2 SV=1
Length = 305
Score = 103 bits (256), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/140 (43%), Positives = 91/140 (65%), Gaps = 6/140 (4%)
Query: 22 VVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLFD 81
++LVG+TG+GKSATGNSILGR+AF+S+ S+ VT+T + + T +G+ + VIDTP +F
Sbjct: 106 LLLVGKTGSGKSATGNSILGRQAFESKISARPVTTTFQ-KGTREFEGKELEVIDTPDIFS 164
Query: 82 FSAGSEFVGKEIVKCIGMAKDGIHAVLVVFSVRSRFSQEEEAALHSLQTLFGKKIFDYMI 141
E K+I C +A G HAVL+V V R++ E++A LQ +FG I Y I
Sbjct: 165 PQNQPEATAKKI--CDLLASPGPHAVLLVIQV-GRYTAEDQAVARCLQEIFGNTILAYTI 221
Query: 142 VVFTGGDELEDNDETLEDYL 161
+VFT ++L + +LE+Y+
Sbjct: 222 LVFTRKEDLAEG--SLEEYI 239
>sp|Q99JY3|GIMA4_MOUSE GTPase IMAP family member 4 OS=Mus musculus GN=Gimap4 PE=1 SV=1
Length = 219
Score = 102 bits (254), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 54/140 (38%), Positives = 84/140 (60%), Gaps = 4/140 (2%)
Query: 22 VVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLFD 81
+VL+G+TG GKS+TGNSILG + F S + +T CE +R DG+ + V+DTPG+FD
Sbjct: 33 IVLLGKTGAGKSSTGNSILGEKVFNSGICAKSITKVCE-KRVSTWDGKELVVVDTPGIFD 91
Query: 82 FSAGSEFVGKEIVKCIGMAKDGIHAVLVVFSVRSRFSQEEEAALHSLQTLFGKKIFDYMI 141
+EI + + + G HA+L+V + R++ EE A + +FGK+ +MI
Sbjct: 92 TEVPDADTQREITRYVALTSPGPHALLLVVPL-GRYTVEEHKATQKILDMFGKQARRFMI 150
Query: 142 VVFTGGDELEDNDETLEDYL 161
++ T D+LED D + +YL
Sbjct: 151 LLLTRKDDLEDTD--IHEYL 168
>sp|Q8NHV1|GIMA7_HUMAN GTPase IMAP family member 7 OS=Homo sapiens GN=GIMAP7 PE=2 SV=1
Length = 300
Score = 100 bits (248), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 87/141 (61%), Gaps = 4/141 (2%)
Query: 22 VVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLFD 81
+VLVG+TG+GKSAT N+ILG F SR ++ VT C+ + G+ + V+DTPGLFD
Sbjct: 11 IVLVGKTGSGKSATANTILGEEIFDSRIAAQAVTKNCQKASREWQ-GRDLLVVDTPGLFD 69
Query: 82 FSAGSEFVGKEIVKCIGMAKDGIHAVLVVFSVRSRFSQEEEAALHSLQTLFGKKIFDYMI 141
+ KEI +CI + G HA+++V + R+++EE+ + ++ +FGK +M+
Sbjct: 70 TKESLDTTCKEISRCIISSCPGPHAIVLVL-LLGRYTEEEQKTVALIKAVFGKSAMKHMV 128
Query: 142 VVFTGGDELEDNDETLEDYLG 162
++FT +ELE ++ D++
Sbjct: 129 ILFTRKEELE--GQSFHDFIA 147
>sp|Q5FVN6|GIMA6_RAT GTPase IMAP family member 6 OS=Rattus norvegicus GN=Gimap6 PE=2
SV=1
Length = 304
Score = 97.8 bits (242), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 59/140 (42%), Positives = 86/140 (61%), Gaps = 6/140 (4%)
Query: 22 VVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLFD 81
++LVG+TG+GKSATGNSILGR+ F+S+ S+ VT + L +G+ + VIDTP +
Sbjct: 105 LLLVGKTGSGKSATGNSILGRQVFESKISARPVTMAFQKGSREL-EGKELEVIDTPDILS 163
Query: 82 FSAGSEFVGKEIVKCIGMAKDGIHAVLVVFSVRSRFSQEEEAALHSLQTLFGKKIFDYMI 141
E K+I C +A G HAVL+V V R++ E++ A LQ +FG I Y I
Sbjct: 164 PQNQPEATAKKI--CDILASPGPHAVLLVIQV-GRYTTEDQEAARCLQEIFGNGILAYTI 220
Query: 142 VVFTGGDELEDNDETLEDYL 161
+VFT +EL + +LE+Y+
Sbjct: 221 LVFTRKEELAEG--SLEEYI 238
>sp|Q75N62|GIMA8_MOUSE GTPase IMAP family member 8 OS=Mus musculus GN=Gimap8 PE=2 SV=1
Length = 688
Score = 95.5 bits (236), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/155 (38%), Positives = 91/155 (58%), Gaps = 9/155 (5%)
Query: 21 TVVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLF 80
++L+GR+G GKSATGN+ILGR AF S+ + VTS+ + + L D Q V V+DTP
Sbjct: 477 NIILLGRSGAGKSATGNTILGRSAFFSQLRAQPVTSSSQSGKRTL-DWQDVVVVDTPSFI 535
Query: 81 DFSAGSE----FVGKEIVKCIGMAKDGIHAVLVVFSVRSRFSQEEEAALHSLQTLFGKKI 136
+ G+E + +EI C+ + ++G+ ++V + RF+QE+E + L+ F + I
Sbjct: 536 Q-TPGTEKDPSRLKEEIHHCLSLCEEGMKIFVLVLQL-GRFTQEDEVVVEQLEASFEENI 593
Query: 137 FDYMIVVFTGGDELEDNDETLEDYLGRECPKPLKK 171
YMIV+FT ++L D D L DY K LKK
Sbjct: 594 MKYMIVLFTRKEDLGDGD--LHDYTNNTKNKALKK 626
Score = 87.8 bits (216), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 85/140 (60%), Gaps = 4/140 (2%)
Query: 22 VVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLFD 81
++L+G+ G GKSATGN+ILG+ F+S+ S VT C+ + ++ QV+ VIDTP LF
Sbjct: 51 LLLLGKQGAGKSATGNTILGKAVFESKFSDHMVTDRCQSESVSVRGKQVI-VIDTPDLFS 109
Query: 82 FSAGSEFVGKEIVKCIGMAKDGIHAVLVVFSVRSRFSQEEEAALHSLQTLFGKKIFDYMI 141
+ SE + + +C+ + D H VL++ + +++E+ + + G K + +MI
Sbjct: 110 SLSCSEVRQQNLKQCLELLADD-HCVLLLVTPIGHYTEEDRETIEGIWGKIGPKAYRHMI 168
Query: 142 VVFTGGDELEDNDETLEDYL 161
VVFT DEL+ +++L +Y+
Sbjct: 169 VVFTREDELD--EDSLWNYI 186
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 68/138 (49%), Gaps = 8/138 (5%)
Query: 15 PSNGERTVVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVI 74
P E V+L+G+ G GKSA GNSILG++ FK++ S + + + G+ V +I
Sbjct: 280 PDMPELRVLLMGKRGVGKSAAGNSILGKQVFKTQFSEKQRVTKAFASHSRVWQGKKVLII 339
Query: 75 DTPGLFDFSAGSEFVGKEIVKCIGMAKDGIHAVLVVFSVRSRFSQEEEAALHSLQTLFGK 134
D+P + + V G HA L+V + S +++ ++ +FG+
Sbjct: 340 DSPEISSWKLDESAVKNHTFP-------GPHAFLLVTPLGSSLKSDDD-VFSIIKRIFGE 391
Query: 135 KIFDYMIVVFTGGDELED 152
K + IV+FT ++ ED
Sbjct: 392 KFTKFTIVLFTRKEDFED 409
>sp|Q96F15|GIMA5_HUMAN GTPase IMAP family member 5 OS=Homo sapiens GN=GIMAP5 PE=1 SV=1
Length = 307
Score = 95.1 bits (235), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 102/171 (59%), Gaps = 16/171 (9%)
Query: 7 DDDWELTSPSNGERTVVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLK 66
+D+ T P+ ++LVG+TG GKSATGNSILG+ F+S+ + VT TC++ +T
Sbjct: 18 EDNLSATPPA---LRIILVGKTGCGKSATGNSILGQPVFESKLRAQSVTRTCQV-KTGTW 73
Query: 67 DGQVVNVIDTPGLFDFSAGSEFVGKEIVKCIGMAKDGIHAVLVVFSVRSRFSQEEEAALH 126
+G+ V V+DTP +F+ A ++ + K I C ++ G H +L+V + RF+ ++ A+
Sbjct: 74 NGRKVLVVDTPSIFESQADTQELYKNIGDCYLLSAPGPHVLLLVIQL-GRFTAQDTVAIR 132
Query: 127 SLQTLFGKKIFDYMIVVFT-----GGDELED-----NDETLEDYLGRECPK 167
++ +FG +++++FT GG L+D ++ +L+D L REC +
Sbjct: 133 KVKEVFGTGAMRHVVILFTHKEDLGGQALDDYVANTDNCSLKD-LVRECER 182
>sp|Q6P9H5|GIMA6_HUMAN GTPase IMAP family member 6 OS=Homo sapiens GN=GIMAP6 PE=2 SV=1
Length = 292
Score = 94.4 bits (233), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 55/140 (39%), Positives = 86/140 (61%), Gaps = 5/140 (3%)
Query: 22 VVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLFD 81
++L+G+TG+GKSATGNSILGR F+S+ S+ VT T + +R+ G+ + VIDTP +
Sbjct: 43 LILMGKTGSGKSATGNSILGRDVFESKLSTRPVTKTSQ-RRSREWAGKELEVIDTPNILS 101
Query: 82 FSAGSEFVGKEIVKCIGMAKDGIHAVLVVFSVRSRFSQEEEAALHSLQTLFGKKIFDYMI 141
E V I + I ++ G HAVL+V + RF+ E++ + LQ +FG + + I
Sbjct: 102 PQVSPE-VADAICQAIVLSAPGPHAVLLVTQL-GRFTDEDQQVVRRLQEVFGVGVLGHTI 159
Query: 142 VVFTGGDELEDNDETLEDYL 161
+VFT ++L +LEDY+
Sbjct: 160 LVFTRKEDLAGG--SLEDYV 177
>sp|Q8WWP7|GIMA1_HUMAN GTPase IMAP family member 1 OS=Homo sapiens GN=GIMAP1 PE=1 SV=1
Length = 306
Score = 93.2 bits (230), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 119/232 (51%), Gaps = 37/232 (15%)
Query: 20 RTVVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGL 79
R ++LVGRTG GKSATGNSILG+R F SR ++ VT C + D V V+DTP +
Sbjct: 28 RRLILVGRTGAGKSATGNSILGQRRFFSRLGATSVTRACTTG-SRRWDKCHVEVVDTPDI 86
Query: 80 FDFSAGSEFVG-KEIVKCIGMAKDGIHAVLVVFSVRSRFSQEEEAALHSLQTLFGKKIFD 138
F G +E C ++ G HA+L+V + RF+ +++ A+ ++ +FG+ +
Sbjct: 87 FSSQVSKTDPGCEERGHCYLLSAPGPHALLLVTQL-GRFTAQDQQAVRQVRDMFGEDVLK 145
Query: 139 YMIVVFTGGDELEDNDETLEDYL----------------GRECPKPLKKGATKLRDQQFE 182
+M++VFT ++L +L DY+ GR C AT R+Q+ +
Sbjct: 146 WMVIVFTRKEDLAGG--SLHDYVSNTENRALRELVAECGGRVC--AFDNRATG-REQEAQ 200
Query: 183 VDSLKG------------YSKREISELKEQMHKS-YEDQLKRITEMVESKLK 221
V+ L G + E+ EL + + + E++L+R+ E V ++++
Sbjct: 201 VEQLLGMVEGLVLEHKGAHYSNEVYELAQVLRWAGPEERLRRVAERVAARVQ 252
>sp|P70224|GIMA1_MOUSE GTPase IMAP family member 1 OS=Mus musculus GN=Gimap1 PE=1 SV=3
Length = 277
Score = 93.2 bits (230), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/234 (31%), Positives = 119/234 (50%), Gaps = 33/234 (14%)
Query: 22 VVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLFD 81
++LVGRTG GKSATGNSILG++ F SR + VT +C + + Q V V+DTP +F
Sbjct: 6 LILVGRTGTGKSATGNSILGQKCFLSRLGAVPVTRSCTLASRMWAGWQ-VEVVDTPDIFS 64
Query: 82 FSAGSEFVG-KEIVKCIGMAKDGIHAVLVVFSVRSRFSQEEEAALHSLQTLFGKKIFDYM 140
G E +C ++ G HA+L+V + RF+ ++ AL +++ LFGK++
Sbjct: 65 SEIPRTDPGCVETARCFVLSAPGPHALLLVTQL-GRFTMQDSQALAAVKRLFGKQVMART 123
Query: 141 IVVFT-----GGDELED-----NDETLEDYL----GRECPKPLKKGATKLRDQQFEVDSL 186
+VVFT GD L+D ++ L D + GR C L AT +++ + + L
Sbjct: 124 VVVFTRQEDLAGDSLQDYVHCTDNRALRDLVAECGGRVC--ALNNRATG-SEREAQAEQL 180
Query: 187 KG------------YSKREISELKEQMHKS-YEDQLKRITEMVESKLKETTTRL 227
G + E+ EL + + +DQ+ ++ E+V +++ T L
Sbjct: 181 LGMVACLVREHGGAHYSNEVYELVQDTRCADPQDQVAKVAEIVAERMQRRTRLL 234
>sp|Q8BWF2|GIMA5_MOUSE GTPase IMAP family member 5 OS=Mus musculus GN=Gimap5 PE=2 SV=1
Length = 308
Score = 91.7 bits (226), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 52/140 (37%), Positives = 90/140 (64%), Gaps = 4/140 (2%)
Query: 22 VVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLFD 81
++LVG++G GKSATGNSIL R AF+SR VT T + + T +G+ + V+DTP +F+
Sbjct: 29 ILLVGKSGCGKSATGNSILRRPAFQSRLRGQSVTRTSQAE-TGTWEGRSILVVDTPPIFE 87
Query: 82 FSAGSEFVGKEIVKCIGMAKDGIHAVLVVFSVRSRFSQEEEAALHSLQTLFGKKIFDYMI 141
A ++ + K+I C + G H +L+V + RF+ E+ A+ ++ +FG + +MI
Sbjct: 88 SKAQNQDMDKDIGDCYLLCAPGPHVLLLVTQL-GRFTAEDAMAVRMVKEVFGVGVMRHMI 146
Query: 142 VVFTGGDELEDNDETLEDYL 161
V+FT ++LE +++LE+++
Sbjct: 147 VLFTRKEDLE--EKSLEEFV 164
>sp|Q4KLG2|GIMA8_RAT GTPase IMAP family member 8 OS=Rattus norvegicus GN=Gimap8 PE=2
SV=1
Length = 688
Score = 91.3 bits (225), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 61/154 (39%), Positives = 90/154 (58%), Gaps = 8/154 (5%)
Query: 22 VVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLFD 81
++L+GR+G GKSATGN+ILGR AF S+ + VTS + R L D Q + V+DTP L
Sbjct: 477 IILLGRSGVGKSATGNTILGRPAFVSQLRAQPVTSRSQSGRRTL-DWQDIVVVDTPSLNQ 535
Query: 82 FSA---GSEFVGKEIVKC-IGMAKDGIHAVLVVFSVRSRFSQEEEAALHSLQTLFGKKIF 137
S + KEI +C + ++G+ ++VF + RF+QE+EA + L+ F + I
Sbjct: 536 MSGTEKNPAQLKKEIKQCLLQNCEEGMKVFVLVFQL-GRFTQEDEAVVEQLEASFEENIM 594
Query: 138 DYMIVVFTGGDELEDNDETLEDYLGRECPKPLKK 171
YMIV+FT ++L D D L D+ K LK+
Sbjct: 595 KYMIVLFTRKEDLGDGD--LYDFTNNTKNKVLKR 626
Score = 87.8 bits (216), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 90/150 (60%), Gaps = 7/150 (4%)
Query: 22 VVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLFD 81
++L+G+ G GKSATGN+ILG+ F+SR S VT C+ + ++ QV+ VIDTP LF
Sbjct: 51 LLLLGKQGAGKSATGNTILGKAVFESRFSHHMVTKRCQSESVSVRGKQVI-VIDTPDLFS 109
Query: 82 FSAGSEFVGKEIVKCIGMAKDGIHAVLVVFSVRSRFSQEEEAALHSLQTLFGKKIFDYMI 141
E + + +C+ + D VL++ + ++E++ + +Q +FG + + +MI
Sbjct: 110 SLGCPEVQQQNLRQCLDLLADPY--VLLLVTPIGHSTEEDKKTIEGIQGVFGPQAYRHMI 167
Query: 142 VVFTGGDELEDNDETLEDYLGRECPKPLKK 171
VVFT DEL ++TL++++ E K LKK
Sbjct: 168 VVFTREDEL--GEDTLQNHI--ESKKYLKK 193
Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 71/145 (48%), Gaps = 11/145 (7%)
Query: 10 WELTSPSNGERTVVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQ 69
W+ +P E V+L+G+ G GKSA GNSILG++ FK++ S + + L + +
Sbjct: 277 WDRDTP---ELRVLLMGKRGVGKSAAGNSILGKQVFKTQFSEKQRVTEAFASHSRLWNQK 333
Query: 70 VVNVIDTPGLFDFSAGSEFVGKEIVKCIGMAKDGIHAVLVVFSVRSRFSQEEEAALHSLQ 129
+ID+P + + V + G HA L+V + S + ++ ++
Sbjct: 334 KFLIIDSPEISSWKLDESDVKEHTFP-------GPHAFLLVTPLGSSL-KSGDSVFSIIK 385
Query: 130 TLFGKKIFDYMIVVFTGGDELEDND 154
+FG+K + I++FT ++ E D
Sbjct: 386 RIFGEKFIKFTIILFTRKEDFEGQD 410
>sp|Q8ND71|GIMA8_HUMAN GTPase IMAP family member 8 OS=Homo sapiens GN=GIMAP8 PE=1 SV=2
Length = 665
Score = 90.9 bits (224), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 93/159 (58%), Gaps = 14/159 (8%)
Query: 19 ERTVVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPG 78
E ++L+G+ +GKSATGN+ILG+ FKS+ S V C+ + VL++ +VV VIDTP
Sbjct: 10 ELRLLLLGKCRSGKSATGNAILGKHVFKSKFSDQTVIKMCQRESWVLRERKVV-VIDTPD 68
Query: 79 LFDFSAGSEFVGKEIVKCIGMAKDGIHAVLVVFSVRSRFSQEEEAALHSLQTLFGKKIFD 138
LF A +E + I C+ ++ +HA+L+V ++ F++E+E +Q +FG +
Sbjct: 69 LFSSIACAEDKQRNIQHCLELSAPSLHALLLVIAI-GHFTREDEETAKGIQQVFGAEARR 127
Query: 139 YMIVVFTGGDE---------LEDN---DETLEDYLGREC 165
++I+VFT D+ +E N + ++DY GR C
Sbjct: 128 HIIIVFTRKDDLGDDLLQDFIEKNKPLKQLVQDYEGRYC 166
Score = 88.2 bits (217), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 86/154 (55%), Gaps = 7/154 (4%)
Query: 21 TVVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPG-- 78
+VLVGR+G GKSATGNSILG F SR + VT T + R DGQ V V+DTP
Sbjct: 440 NIVLVGRSGTGKSATGNSILGSLVFTSRLRAQPVTKTSQSGRRTW-DGQEVVVVDTPSFN 498
Query: 79 -LFDFSAGSEFVGKEIVKCIGMAKDGIHAVLVVFSVRSRFSQEEEAALHSLQTLFGKKIF 137
+ D + +E+ +C+ + G ++VF + RF++E++ A+ L+ +FG
Sbjct: 499 QMLDVEKDPSRLEEEVKRCLSCCEKGDTFFVLVFQL-GRFTEEDKTAVAKLEAIFGADFT 557
Query: 138 DYMIVVFTGGDELEDNDETLEDYLGRECPKPLKK 171
Y I++FT ++L + LED++ K L++
Sbjct: 558 KYAIMLFTRKEDLGAGN--LEDFMKNSDNKALRR 589
Score = 81.6 bits (200), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 82/148 (55%), Gaps = 11/148 (7%)
Query: 14 SPSNGERTVVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNV 73
+P E TV+LVG+ G GKSA GNSILGR+AF++ S VT + + + + V++
Sbjct: 242 NPGTSELTVLLVGKRGAGKSAAGNSILGRQAFQTGFSEQSVTQSFLSESRSWRKKK-VSI 300
Query: 74 IDTPGLFDFSAGSEFVGKEIVKCIGMAKDGIHAVLVVFSVRSRFSQEEEAALHSLQTLFG 133
ID P + V K I G HA L+V + +++ +EA L ++Q FG
Sbjct: 301 IDAPDISSLKNIDSEVRKHIC-------TGPHAFLLVTPL-GFYTKNDEAVLSTIQNNFG 352
Query: 134 KKIFDYMIVVFTGGDELEDNDETLEDYL 161
+K F+YMI++ T ++L D D L+ +L
Sbjct: 353 EKFFEYMIILLTRKEDLGDQD--LDTFL 378
>sp|Q9UG22|GIMA2_HUMAN GTPase IMAP family member 2 OS=Homo sapiens GN=GIMAP2 PE=1 SV=2
Length = 337
Score = 90.9 bits (224), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 88/146 (60%), Gaps = 4/146 (2%)
Query: 16 SNGERTVVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVID 75
S E ++LVG+TG GKSA GNSIL ++AF+S+ S +T TC + + ++V +ID
Sbjct: 19 SRSELRIILVGKTGTGKSAAGNSILRKQAFESKLGSQTLTKTCSKSQGSWGNREIV-IID 77
Query: 76 TPGLFDFSAGSEFVGKEIVKCIGMAKDGIHAVLVVFSVRSRFSQEEEAALHSLQTLFGKK 135
TP +F + E + KE+ +C ++ G H +L+V + R++ +++ A ++ +FG+
Sbjct: 78 TPDMFSWKDHCEALYKEVQRCYLLSAPGPHVLLLVTQL-GRYTSQDQQAAQRVKEIFGED 136
Query: 136 IFDYMIVVFTGGDELEDNDETLEDYL 161
+ IV+FT ++L N +L DY+
Sbjct: 137 AMGHTIVLFTHKEDL--NGGSLMDYM 160
>sp|Q8K3L6|GIMA5_RAT GTPase IMAP family member 5 OS=Rattus norvegicus GN=Gimap5 PE=2
SV=1
Length = 326
Score = 90.5 bits (223), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/140 (37%), Positives = 86/140 (61%), Gaps = 4/140 (2%)
Query: 22 VVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLFD 81
++LVG++G GKSATGNSIL R AF+SR VT T + + +G+ V+DTP +F+
Sbjct: 47 ILLVGKSGCGKSATGNSILRRPAFESRLRGQSVTRTSQAEMGTW-EGRSFLVVDTPPIFE 105
Query: 82 FSAGSEFVGKEIVKCIGMAKDGIHAVLVVFSVRSRFSQEEEAALHSLQTLFGKKIFDYMI 141
++ + K+I C M G H +L+V + R++ E+ A+ ++ +FG + YMI
Sbjct: 106 SKIQNQDMDKDIGNCYLMCAPGPHVLLLVTQL-GRYTVEDAMAVRMVKQIFGVGVMRYMI 164
Query: 142 VVFTGGDELEDNDETLEDYL 161
V+FT ++L DE+LE+++
Sbjct: 165 VLFTHKEDLA--DESLEEFV 182
>sp|Q99MI6|GIMA3_MOUSE GTPase IMAP family member 3 OS=Mus musculus GN=Gimap3 PE=1 SV=2
Length = 301
Score = 86.7 bits (213), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 89/140 (63%), Gaps = 4/140 (2%)
Query: 22 VVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLFD 81
++LVG++G GKSATGNS+L R AF+SR VT T + + T +G+ + V+DTP +F+
Sbjct: 25 ILLVGKSGCGKSATGNSLLRRPAFESRLRGQSVTRTSQAE-TGTWEGRSILVVDTPPIFE 83
Query: 82 FSAGSEFVGKEIVKCIGMAKDGIHAVLVVFSVRSRFSQEEEAALHSLQTLFGKKIFDYMI 141
A ++ + K+I C + G H +L+V + RF+ E+ A+ ++ +FG + +MI
Sbjct: 84 SKAQNQDMDKDIGDCYLLCAPGPHVLLLVTQL-GRFTAEDVMAVRMVKEVFGVGVMRHMI 142
Query: 142 VVFTGGDELEDNDETLEDYL 161
V+FT ++L +++LE+++
Sbjct: 143 VLFTRKEDLA--EKSLEEFV 160
>sp|A5PKB7|GIMA6_BOVIN GTPase IMAP family member 6 OS=Bos taurus GN=GIMAP6 PE=2 SV=1
Length = 341
Score = 79.7 bits (195), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 84/144 (58%), Gaps = 12/144 (8%)
Query: 22 VVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLFD 81
++LVG++G+GKSATGNSILGRR F+S+ S+ VT + Q +G+ + VIDTP +
Sbjct: 96 LILVGKSGSGKSATGNSILGRRVFESKLSARPVTQAFQ-QGCRAWEGRELQVIDTPDILS 154
Query: 82 FSAGSEFVGKEIVKCIGMAKDGI----HAVLVVFSVRSRFSQEEEAALHSLQTLFGKKIF 137
A G + +G A G +AVL+V + RF++E++ L+ +FGK I
Sbjct: 155 PWA----AGWATAQGVGEAGTGSLPKQYAVLLVTQL-GRFTEEDQQVAGRLEEVFGKGIL 209
Query: 138 DYMIVVFTGGDELEDNDETLEDYL 161
I+VFT ++L + +LE YL
Sbjct: 210 ARTILVFTRKEDL--DGRSLETYL 231
>sp|E9PW74|GIMD1_MOUSE GTPase IMAP family member GIMD1 OS=Mus musculus GN=Gimd1 PE=3 SV=1
Length = 217
Score = 68.2 bits (165), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 76/154 (49%), Gaps = 13/154 (8%)
Query: 21 TVVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQV---------- 70
+ + GRT +GKS+ GN +LG F S + VT C + R+ G +
Sbjct: 10 NLAVFGRTQSGKSSAGNVLLGSADFYSSFAPGSVTKECSLGRSCHLHGFMRRGGQEISLQ 69
Query: 71 VNVIDTPGLFDFSAGSEFVGKEIVKCI--GMAKDGIH-AVLVVFSVRSRFSQEEEAALHS 127
+ V+DTPG + V +E+ K + ++G+H A+LV + F QE A+
Sbjct: 70 IQVLDTPGYPHSKLSTRCVKQEVKKALLHHFGQEGLHLALLVQRADVPFFGQEASNAVQL 129
Query: 128 LQTLFGKKIFDYMIVVFTGGDELEDNDETLEDYL 161
+Q L G +YM V+FT +ELE+ + E+YL
Sbjct: 130 MQELLGDSCKNYMAVLFTHAEELEEAGLSEEEYL 163
>sp|P0DJR0|GIMD1_HUMAN GTPase IMAP family member GIMD1 OS=Homo sapiens GN=GIMD1 PE=2 SV=1
Length = 217
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 75/163 (46%), Gaps = 13/163 (7%)
Query: 12 LTSPSNGERTVVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTV------- 64
+T P+ + L G T +GKS+ GN +LG F S + VT+ C + R+
Sbjct: 1 MTDPNKMIINLALFGMTQSGKSSAGNILLGSTDFHSSFAPCSVTTCCSLGRSCHLHSFMR 60
Query: 65 ---LKDGQVVNVIDTPGLFDFSAGSEFVGKEIVKCIG--MAKDGIHAVLVVFSVRSRFS- 118
L+ V V+DTPG ++V +E+ + + + G+H L+V F
Sbjct: 61 RGGLEVALQVQVLDTPGYPHSRLSKKYVKQEVKEALAHHFGQGGLHLALLVQRADVPFCG 120
Query: 119 QEEEAALHSLQTLFGKKIFDYMIVVFTGGDELEDNDETLEDYL 161
QE + +Q L G +Y ++FT +++E+ T + YL
Sbjct: 121 QEVTDPVQMIQELLGHAWMNYTAILFTHAEKIEEAGLTEDKYL 163
>sp|B0BMZ3|GIMD1_RAT GTPase IMAP family member GIMD1 OS=Rattus norvegicus GN=Gimd1 PE=2
SV=1
Length = 216
Score = 61.6 bits (148), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 75/154 (48%), Gaps = 13/154 (8%)
Query: 21 TVVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQV---------- 70
+ ++G+T +GKS+ GN +LG F SR + VT C + R+ G +
Sbjct: 9 NLAVLGKTQSGKSSAGNVLLGSADFYSRFAPGSVTKDCSLGRSCHIHGFMRRGGHEISLQ 68
Query: 71 VNVIDTPGLFDFSAGSEFVGKEIVKCI--GMAKDGIHAVLVVFSV-RSRFSQEEEAALHS 127
+ V+DTPG + V +E+ K + ++G+H L+V F QE ++
Sbjct: 69 IQVLDTPGYPHSKLSTRCVKQEVKKALEHHFGQEGLHLALLVHRADMPFFGQEASDSVQL 128
Query: 128 LQTLFGKKIFDYMIVVFTGGDELEDNDETLEDYL 161
+Q L G +Y ++FT +++++ + E+YL
Sbjct: 129 IQELLGDSWKNYTAILFTHAEKIKEAGLSEEEYL 162
>sp|G3MZQ6|GIMD1_BOVIN GTPase IMAP family member GIMD1 OS=Bos taurus GN=GIMD1 PE=3 SV=1
Length = 216
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 78/164 (47%), Gaps = 14/164 (8%)
Query: 21 TVVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRT------VLKDGQ----V 70
+ L G T +GKS+ GN ILG F S + VT C + R+ + + GQ
Sbjct: 9 NLALFGMTQSGKSSAGNIILGSTDFHSSFAPCSVTRDCSLGRSCHFRSFMRRGGQEVTLQ 68
Query: 71 VNVIDTPGLFDFSAGSEFVGKEIVKCIG--MAKDGIHAVLVVFSVRSRFS-QEEEAALHS 127
V V+DTPG + V +E+ + + ++G+H L+V QEE + +
Sbjct: 69 VQVLDTPGYPHSRLSKKHVRQEVREALAHHFGQEGLHLALLVQRADVPLCGQEESSPVQM 128
Query: 128 LQTLFGKKIFDYMIVVFTGGDELEDNDETLEDYLGRECPKPLKK 171
+Q L G +Y ++FT +++E+ ++YL RE + L K
Sbjct: 129 IQELLGHTWMNYTAILFTHAEKIEEAGFNEDEYL-REASETLLK 171
>sp|Q9LVT3|DRL38_ARATH Probable disease resistance protein At5g47260 OS=Arabidopsis
thaliana GN=At5g47260 PE=3 SV=2
Length = 948
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 43/67 (64%)
Query: 12 LTSPSNGERTVVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVV 71
LTS S+ +T+ LVG TG+G++AT N+I G++ +S ++ VT C+ + D +
Sbjct: 874 LTSESHPIQTIDLVGTTGSGETATANNIQGKKVVQSGTHATVVTMECQTYKVFTPDCPIN 933
Query: 72 NVIDTPG 78
N+IDTPG
Sbjct: 934 NMIDTPG 940
>sp|O23680|TOC33_ARATH Translocase of chloroplast 33, chloroplastic OS=Arabidopsis
thaliana GN=TOC33 PE=1 SV=1
Length = 297
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 84/167 (50%), Gaps = 11/167 (6%)
Query: 21 TVVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLF 80
TV+++G+ G GKS+T NS++G + + + + RT+ G +N+IDTPGL
Sbjct: 38 TVLVLGKGGVGKSSTVNSLIGEQVVRVSPFQAEGLRPVMVSRTM--GGFTINIIDTPGLV 95
Query: 81 DFSAGSEFVGKEIVKCIG--MAKDGIHAVLVVFSVR-SRFSQEEEAALHSLQTLFGKKIF 137
+ AG +V + ++ I + I +L V + R + ++ + ++ FGK+I+
Sbjct: 96 E--AG--YVNHQALELIKGFLVNRTIDVLLYVDRLDVYRVDELDKQVVIAITQTFGKEIW 151
Query: 138 DYMIVVFTGGDELEDNDETLEDYLGRECPKPLK--KGATKLRDQQFE 182
++V T ++ + E + + LK + +K+R Q+FE
Sbjct: 152 CKTLLVLTHAQFSPPDELSYETFSSKRSDSLLKTIRAGSKMRKQEFE 198
>sp|Q552Z6|GTPA_DICDI GTP-binding protein A OS=Dictyostelium discoideum GN=gtpA PE=3 SV=1
Length = 449
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 61/130 (46%), Gaps = 8/130 (6%)
Query: 19 ERTVVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPG 78
E V+L+GRTG GKS+T N++ G +S S R V +G +N+IDTPG
Sbjct: 151 ECNVLLLGRTGVGKSSTLNTVFGID-IPVHSSESCTQDPFTYSRVV--NGFKLNIIDTPG 207
Query: 79 LFDFSAGSEFVGKEIVKCI-GMAKDGIHAVLVV--FSVRSRFSQEEEAALHSLQTLFGKK 135
D S G ++K ++ IH VL V F+ +RF + ++ G +
Sbjct: 208 FLD-SQGELVDSNNMIKIQRYLSGKTIHCVLFVEKFT-ETRFDGAHQLVINQFTEKLGPQ 265
Query: 136 IFDYMIVVFT 145
++ VV T
Sbjct: 266 LWRNAAVVLT 275
>sp|Q6S5G3|TOC90_ARATH Translocase of chloroplast 90, chloroplastic OS=Arabidopsis
thaliana GN=TOC90 PE=1 SV=1
Length = 793
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 62/129 (48%), Gaps = 9/129 (6%)
Query: 22 VVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLFD 81
++++G+TG GKSAT NSI G+ ++ A G E+ TV G V IDTPG
Sbjct: 169 ILVLGKTGVGKSATINSIFGQPKSETDAFRPGTDRIEEVMGTV--SGVKVTFIDTPGFHP 226
Query: 82 FSAGSEFVGKEIVKCIGMAKDGIHAVLVVF-----SVRSRFSQEEEAALHSLQTLFGKKI 136
S+ S ++I+ I +V++ + R+S + + L + +FG I
Sbjct: 227 LSSSSTRKNRKILLSIKRYVKKRPPDVVLYLDRLDMIDMRYS--DFSLLQLITEIFGAAI 284
Query: 137 FDYMIVVFT 145
+ I+V T
Sbjct: 285 WLNTILVMT 293
>sp|Q41009|TOC34_PEA Translocase of chloroplast 34 OS=Pisum sativum GN=TOC34 PE=1 SV=1
Length = 310
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 63/126 (50%), Gaps = 5/126 (3%)
Query: 21 TVVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLF 80
T++++G+ G GKS+T NSI+G R S + R+ + G +N+IDTPGL
Sbjct: 41 TILVMGKGGVGKSSTVNSIIGERVVSISPFQSEGPRPVMVSRS--RAGFTLNIIDTPGLI 98
Query: 81 DFSAGSEFVGKEIVKCIGMAKDGIHAVLVVFSVRS-RFSQEEEAALHSLQTLFGKKIFDY 139
+ ++ + I+K + K I +L V + + R ++ ++ FGK I++
Sbjct: 99 EGGYIND-MALNIIKSFLLDKT-IDVLLYVDRLDAYRVDNLDKLVAKAITDSFGKGIWNK 156
Query: 140 MIVVFT 145
IV T
Sbjct: 157 AIVALT 162
>sp|Q38906|TOC34_ARATH Translocase of chloroplast 34, chloroplastic OS=Arabidopsis
thaliana GN=TOC34 PE=1 SV=2
Length = 313
Score = 42.0 bits (97), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 40/62 (64%), Gaps = 4/62 (6%)
Query: 21 TVVLVGRTGNGKSATGNSILGRRAFK-SRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGL 79
TV+++G+ G GKS+T NS++G +A S S G+ T + RT + G +N+IDTPGL
Sbjct: 40 TVLVMGKGGVGKSSTVNSVIGEKAAAVSTFQSEGLRPTL-VSRT--RSGFTLNIIDTPGL 96
Query: 80 FD 81
+
Sbjct: 97 IE 98
>sp|O81283|TC159_ARATH Translocase of chloroplast 159, chloroplastic OS=Arabidopsis
thaliana GN=TOC159 PE=1 SV=1
Length = 1503
Score = 41.6 bits (96), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Query: 21 TVVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGL 79
++++G+ G GKSAT NSILG + A TS E+ TV +G + IDTPGL
Sbjct: 857 NILVLGKAGVGKSATINSILGNQIASIDAFGLSTTSVREISGTV--NGVKITFIDTPGL 913
>sp|Q31DJ0|MNME_THICR tRNA modification GTPase MnmE OS=Thiomicrospira crunogena (strain
XCL-2) GN=mnmE PE=3 SV=2
Length = 451
Score = 40.8 bits (94), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 97/237 (40%), Gaps = 32/237 (13%)
Query: 21 TVVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLK-----DGQVVNVID 75
+VV++GR GKS+ N++ GR S+ VT R ++K DG ++V+D
Sbjct: 219 SVVILGRPNAGKSSLLNALSGRE-------SAIVTDIAGTTRDIVKEEIQIDGMPLHVLD 271
Query: 76 TPGLFDFSAGSEFVGKEIVKCIGMAKDGIHAVLVVFSVRSRFSQEEEAALHSLQTLFGKK 135
T GL + + E +G ++ A + +LV+ E++A L + +
Sbjct: 272 TAGLREATDAVEQIG---IQRAWAAIEEADRILVMVQANEAIHPEDQAILEKMPSHIPVT 328
Query: 136 IFDYMIVVFTGGDELEDNDETLEDYLGRECPKPLKKGATKLRDQQFEVDSLKGYSKREIS 195
+ I + EL +ND E +L + +D LK + K E+
Sbjct: 329 LIHNKIDLIEKSPELSENDGETEIWLSAK--------------HHLGLDLLKQHLKTEMG 374
Query: 196 ELKEQMHKSYEDQLKRITEMVESKLKETTTRLEQQLAEEQAARLKAEEVAQLAQMKS 252
Q + KR E +E+ L T +QQL A L AE++ Q Q S
Sbjct: 375 --YAQTEEGVFMARKRHLEALETALHFVETG-QQQLEHFAAGELLAEDLRQAQQALS 428
>sp|Q71ZZ0|RSGA2_LISMF Putative ribosome biogenesis GTPase RsgA 2 OS=Listeria
monocytogenes serotype 4b (strain F2365) GN=rsgA2 PE=3
SV=1
Length = 346
Score = 40.4 bits (93), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 6/76 (7%)
Query: 21 TVVLVGRTGNGKSATGNSILGRRAFKSRA----SSSGVTSTCEMQRTVLKDGQVVNVIDT 76
T+VL+G +G GKS+ NS+ G K+ S G +T + +L +G + VIDT
Sbjct: 185 TLVLLGSSGVGKSSFINSLAGTDLMKTAGIREDDSKGKHTTTHREMHLLTNGWI--VIDT 242
Query: 77 PGLFDFSAGSEFVGKE 92
PG+ +F G G E
Sbjct: 243 PGMREFGVGFNQAGLE 258
>sp|Q8Y7F0|RSGA1_LISMO Putative ribosome biogenesis GTPase RsgA 1 OS=Listeria
monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e)
GN=rsgA1 PE=3 SV=1
Length = 346
Score = 40.4 bits (93), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 6/76 (7%)
Query: 21 TVVLVGRTGNGKSATGNSILGRRAFKSRA----SSSGVTSTCEMQRTVLKDGQVVNVIDT 76
T++L+G +G GKS+ NS+ G K+ S G +T + +L +G + VIDT
Sbjct: 185 TLILLGSSGVGKSSFINSLAGTDLMKTAGIREDDSKGKHTTTHREMHLLSNGWI--VIDT 242
Query: 77 PGLFDFSAGSEFVGKE 92
PG+ +F G G E
Sbjct: 243 PGMREFGVGFNQAGLE 258
>sp|Q1Q7V4|MNME_PSYCK tRNA modification GTPase MnmE OS=Psychrobacter cryohalolentis
(strain K5) GN=mnmE PE=3 SV=2
Length = 478
Score = 39.7 bits (91), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 67/139 (48%), Gaps = 10/139 (7%)
Query: 22 VVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCE--MQRTVLKDGQVVNVIDTPGL 79
VVL GR GKS S+L R A + RA + V T +Q TV+ +G +++ DT GL
Sbjct: 233 VVLAGRPNAGKS----SLLNRLAGQERAIVTDVAGTTRDTLQETVVLNGLTLHLTDTAGL 288
Query: 80 FDFSAGSEFVGKEIVKCIGMAKDGIHAVLVVFSVRSRFSQEEEAALHSLQTLFGKKIFDY 139
+ E +G E + D +L+V+ V +R +EE L + LFG+
Sbjct: 289 RETEDTVERIGIERARTAIAQAD---MLLMVYDV-TRDLEEESTPLQLAEQLFGELPEAK 344
Query: 140 MIVVFTGGDELEDNDETLE 158
+++ +L +N+ + E
Sbjct: 345 RLLIIANKSDLLNNNSSKE 363
>sp|Q89A14|DER_BUCBP GTPase Der OS=Buchnera aphidicola subsp. Baizongia pistaciae
(strain Bp) GN=der PE=3 SV=1
Length = 462
Score = 38.9 bits (89), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 59/117 (50%), Gaps = 2/117 (1%)
Query: 21 TVVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLF 80
T+ L+GRT GKS N + G R ++ + +T + ++ + ++V +IDTPG+
Sbjct: 4 TIALIGRTNVGKSTLFNKLTGNRNDALASNHASLTRDRKHGFIIVNNTKIV-LIDTPGIN 62
Query: 81 DFSAGSEFVGKEIVKCIGMAKDGIHAVLVVFSVRSRFSQEEEAALHSLQTLFGKKIF 137
+ S + KEI + + + V +V S R++ ++ + L+ F KKIF
Sbjct: 63 EDSKKKISLDKEIFEQVKFSIKQADLVCLVVSARNKLMHKDVEIIEMLRK-FQKKIF 118
>sp|O00291|HIP1_HUMAN Huntingtin-interacting protein 1 OS=Homo sapiens GN=HIP1 PE=1 SV=5
Length = 1037
Score = 38.1 bits (87), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 51/87 (58%), Gaps = 6/87 (6%)
Query: 192 REISELKEQMHKSYEDQLKRITEMVESKLKETTTRLEQQLAEEQAARLKAEEVAQLAQMK 251
REIS LK Q+ + +K ++ V +LK + LE LAE+Q R +A + + + +
Sbjct: 382 REISGLKAQL-----ENMKTESQRVVLQLKGHVSELEADLAEQQHLRQQAADDCEFLRAE 436
Query: 252 SNDEIRKLRENLERAQRETEELRKQAE 278
DE+R+ RE+ E+AQR E+ ++A+
Sbjct: 437 L-DELRRQREDTEKAQRSLSEIERKAQ 462
>sp|A5WI36|MNME_PSYWF tRNA modification GTPase MnmE OS=Psychrobacter sp. (strain PRwf-1)
GN=mnmE PE=3 SV=1
Length = 465
Score = 37.7 bits (86), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 39/73 (53%), Gaps = 6/73 (8%)
Query: 22 VVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCE--MQRTVLKDGQVVNVIDTPGL 79
VVL GR GKS+ NS+ G + RA + V T +Q T++ +G +++ DT GL
Sbjct: 220 VVLAGRPNAGKSSLLNSLAG----QERAIVTDVAGTTRDTLQETIVLNGLTIHLTDTAGL 275
Query: 80 FDFSAGSEFVGKE 92
D + E +G E
Sbjct: 276 RDTTDAVERIGIE 288
>sp|Q97JI5|ERA_CLOAB GTPase Era OS=Clostridium acetobutylicum (strain ATCC 824 / DSM 792
/ JCM 1419 / LMG 5710 / VKM B-1787) GN=era PE=3 SV=1
Length = 296
Score = 37.7 bits (86), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 58/121 (47%), Gaps = 8/121 (6%)
Query: 22 VVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLFD 81
V ++GR GKS N I+G + S SS T+ +Q + + + +DTPG+ +
Sbjct: 7 VTIIGRPNVGKSTLLNHIMGEKL--SIVSSKPQTTRNNIQTILTGEEYQIVFVDTPGMHN 64
Query: 82 FSAGSEFVGKEIVKCIGMAKDGIHAVLVVFSVRSRFSQEEEAALHSLQTLFGKKIFDYMI 141
+G+ +VK AK+ ++ V V V + + + LH L+ L K+ +++
Sbjct: 65 ---PRHKLGEYMVKV---AKESMNEVDVALFVTTPDVEVKRGDLHILEQLKSAKVPVFLV 118
Query: 142 V 142
V
Sbjct: 119 V 119
>sp|A9BHZ7|MNME_PETMO tRNA modification GTPase MnmE OS=Petrotoga mobilis (strain DSM
10674 / SJ95) GN=mnmE PE=3 SV=1
Length = 452
Score = 37.0 bits (84), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 62/133 (46%), Gaps = 14/133 (10%)
Query: 18 GERTVVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCE--MQRTVLKDGQVVNVID 75
G RTV+ VG+ +GKS N++L K RA + + T ++ + +G + +ID
Sbjct: 213 GVRTVI-VGKPNSGKSTLLNALLR----KDRAIVTDIPGTTRDTIEENLNINGIYIRLID 267
Query: 76 TPGLFDFSAGSEFVGKEIVKCIGMAKDGIHAVLVVFSVRSRFSQEEEAALHSLQTLFGKK 135
T G+ E VG E + I K+ H +L V + F+QE+E + L L K
Sbjct: 268 TAGIRYTEDTLERVGIE--RTINSIKNS-HLILFVLDGTTPFTQEDELIYNKLNELGDKT 324
Query: 136 IFDYMIVVFTGGD 148
+ I++ D
Sbjct: 325 V----IIILNKSD 333
>sp|P42566|EPS15_HUMAN Epidermal growth factor receptor substrate 15 OS=Homo sapiens
GN=EPS15 PE=1 SV=2
Length = 896
Score = 35.0 bits (79), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 41/72 (56%), Gaps = 10/72 (13%)
Query: 219 KLKETTTRLEQQLAE------EQA---ARLKAEEVAQLAQMKS-NDEIRKLRENLERAQR 268
+L E +LE+QL E E+A + LKAE +Q +Q+ + +E+ K RE L R Q+
Sbjct: 400 ELDEQKAQLEEQLKEVRKKCAEEAQLISSLKAELTSQESQISTYEEELAKAREELSRLQQ 459
Query: 269 ETEELRKQAEKG 280
ET EL + E G
Sbjct: 460 ETAELEESVESG 471
>sp|Q7Z4S6|KI21A_HUMAN Kinesin-like protein KIF21A OS=Homo sapiens GN=KIF21A PE=1 SV=2
Length = 1674
Score = 34.7 bits (78), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 69/135 (51%), Gaps = 7/135 (5%)
Query: 148 DELEDNDETLEDYLGRECPKPLKKGATKLRDQQFEVDSLKGYSKREISELKEQMHKSYED 207
D++ N ++E Y + K + KL+ E+ L+ K LK Q YE
Sbjct: 697 DQVLQNLGSVESYSEEKAKKVRSEYEKKLQAMNKELQRLQAAQKEHARLLKNQ--SQYEK 754
Query: 208 QLKRITEMVESKLKETTTRLEQQLAEEQ-AARL-KAEEVAQLAQMKSNDEIRKLRENLER 265
QLK++ + V ++K+T RL +Q+ EEQ ARL ++ ++AQ+K + R + L
Sbjct: 755 QLKKLQQDV-MEMKKTKVRLMKQMKEEQEKARLTESRRNREIAQLKKDQRKRDHQLRLLE 813
Query: 266 AQRETEE--LRKQAE 278
AQ+ +E LR++ E
Sbjct: 814 AQKRNQEVVLRRKTE 828
>sp|Q8IDX6|RBP2A_PLAF7 Reticulocyte-binding protein 2 homolog a OS=Plasmodium falciparum
(isolate 3D7) GN=PF13_0198 PE=3 SV=1
Length = 3130
Score = 34.3 bits (77), Expect = 1.0, Method: Composition-based stats.
Identities = 35/122 (28%), Positives = 61/122 (50%), Gaps = 4/122 (3%)
Query: 161 LGRECPKPLKKGATKLRDQQFEVDSLKGYSKREISELK--EQMHKSYEDQLKRITEMVES 218
L R+ + L+K R +Q ++ K ++ ELK EQ E+ LKR +
Sbjct: 2739 LKRQEQERLQKEEELKRQEQERLEREKQEQLQKEEELKRQEQERLQKEEALKRQEQERLQ 2798
Query: 219 KLKETTTRLEQQLAEEQAARL-KAEEVAQLAQMKSNDEIRKLRENLERAQRETEELRKQA 277
K +E + +++L E+ +L K EE+ + Q + E R+ ER Q+E EEL++Q
Sbjct: 2799 KEEELKRQEQERLEREKQEQLQKEEELKRQEQERLQKEEALKRQEQERLQKE-EELKRQE 2857
Query: 278 EK 279
++
Sbjct: 2858 QE 2859
>sp|P42567|EPS15_MOUSE Epidermal growth factor receptor substrate 15 OS=Mus musculus
GN=Eps15 PE=1 SV=1
Length = 897
Score = 34.3 bits (77), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 41/72 (56%), Gaps = 10/72 (13%)
Query: 219 KLKETTTRLEQQLAE------EQA---ARLKAEEVAQLAQMKS-NDEIRKLRENLERAQR 268
+L E +LE+QL E E+A + LKAE +Q +Q+ S +E+ K RE L R Q+
Sbjct: 400 ELDEQKAQLEEQLQEVRKKCAEEAQLISSLKAEITSQESQISSYEEELLKAREELSRLQQ 459
Query: 269 ETEELRKQAEKG 280
ET +L + E G
Sbjct: 460 ETAQLEESVESG 471
>sp|P0C8L8|YL139_YARLI Uncharacterized protein YALI0A18139g OS=Yarrowia lipolytica (strain
CLIB 122 / E 150) GN=YALI0A18139g PE=4 SV=1
Length = 782
Score = 34.3 bits (77), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 51/87 (58%), Gaps = 3/87 (3%)
Query: 163 RECPKPLKKGATKLRDQQFEVDSLKGYSKREISELKEQMHKSYEDQLKRITEMVESKLKE 222
RE + +++ + +L ++ E+DSLK + E KE + E+QLKR++E + +L++
Sbjct: 436 REVEELVQQCSEQLNERSVEIDSLKSQYEEGQGE-KEMLVGQLEEQLKRVSEEKDVELRQ 494
Query: 223 TTTRLEQQLAEEQAARLKAEEVAQLAQ 249
T R+E++L + A K E+ QL Q
Sbjct: 495 ATERMEKELNDVTAT--KDHEIQQLKQ 519
>sp|Q5ZM98|GRP75_CHICK Stress-70 protein, mitochondrial OS=Gallus gallus GN=HSPA9 PE=1
SV=1
Length = 675
Score = 33.9 bits (76), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 50/102 (49%), Gaps = 7/102 (6%)
Query: 177 RDQQFEVDSLKGYSKREISELKEQMHKSYEDQLKRITEMVES-KLKETTTRLEQQLAEEQ 235
R+QQ + S G SK EI + + K Y ++ +R E VE+ L E + EE
Sbjct: 543 REQQIVIQSSGGLSKDEIENMVKNAEK-YAEEDRRRKERVEAVNLAEGIIHDTESKMEEF 601
Query: 236 AARLKAEEVAQLAQMKSNDEIRKLRENLERAQRETEELRKQA 277
+L A+E +L +EI K+RE L R ET E +QA
Sbjct: 602 KDQLPADECNKL-----KEEIAKMRELLARKDTETGENIRQA 638
>sp|Q9QXL2|KI21A_MOUSE Kinesin-like protein KIF21A OS=Mus musculus GN=Kif21a PE=1 SV=2
Length = 1672
Score = 33.5 bits (75), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 57/108 (52%), Gaps = 7/108 (6%)
Query: 175 KLRDQQFEVDSLKGYSKREISELKEQMHKSYEDQLKRITEMVESKLKETTTRLEQQLAEE 234
KL E+ L+ K LK Q YE QLK++ + V ++K+T RL +Q+ EE
Sbjct: 726 KLHAMNKELQRLQTAQKEHARLLKNQ--SQYEKQLKKLQQDV-MEMKKTKVRLMKQMKEE 782
Query: 235 Q-AARL-KAEEVAQLAQMKSNDEIRKLRENLERAQRETEE--LRKQAE 278
Q ARL ++ ++AQ+K + R + L AQ+ +E LR++ E
Sbjct: 783 QEKARLTESRRNREIAQLKKDQRKRDHQLRLLEAQKRNQEVVLRRKTE 830
>sp|B7VJH7|IF2_VIBSL Translation initiation factor IF-2 OS=Vibrio splendidus (strain
LGP32) GN=infB PE=3 SV=1
Length = 896
Score = 33.1 bits (74), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 48/105 (45%), Gaps = 13/105 (12%)
Query: 172 GATKLRDQQFEVDSLKGYSKREISELKEQMHKSYEDQLKRITEMVESKLKETTTRLEQQL 231
G K +D Q EV + Y KR + ED+ KR E V ++ E Q+
Sbjct: 80 GGGKSKDVQVEVRKKRTYVKR----------STIEDEAKREAEEVANREAEEKA---QRD 126
Query: 232 AEEQAARLKAEEVAQLAQMKSNDEIRKLRENLERAQRETEELRKQ 276
AEEQA R AE+ + A+ K E RE E+AQR E K+
Sbjct: 127 AEEQAKRDAAEKAQREAEAKVTREADAKREAEEKAQRAQAEKAKK 171
>sp|C0H5F4|RBP2B_PLAF7 Reticulocyte binding protein 2 homolog b OS=Plasmodium falciparum
(isolate 3D7) GN=Rh2b PE=3 SV=1
Length = 3179
Score = 32.7 bits (73), Expect = 2.9, Method: Composition-based stats.
Identities = 22/82 (26%), Positives = 45/82 (54%), Gaps = 5/82 (6%)
Query: 198 KEQMHKSYEDQLKRITEMVESKLKETTTRLEQQLAEEQAARLKAEEVAQLAQMKSNDEIR 257
KE++ + ++QLK+ + + ++ + E+ L ++ RL+ EE ++K ++ R
Sbjct: 2630 KERLEREKQEQLKKEALKKQEQERQEQQQKEEALKRQEQERLQKEE-----ELKRQEQER 2684
Query: 258 KLRENLERAQRETEELRKQAEK 279
RE E+ Q+E E +K+ EK
Sbjct: 2685 LEREKQEQLQKEEELRKKEQEK 2706
>sp|Q9UKS6|PACN3_HUMAN Protein kinase C and casein kinase substrate in neurons protein 3
OS=Homo sapiens GN=PACSIN3 PE=1 SV=2
Length = 424
Score = 31.6 bits (70), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 50/99 (50%), Gaps = 8/99 (8%)
Query: 181 FEVDSLKGYSKREISELKEQMHKSYEDQLKRITEMVESKLKETTTRLEQQLAEEQAARLK 240
F L G+ RE ++ K+ + LKR+ E+ SK R +++ A+ + + K
Sbjct: 118 FHRPVLGGF--RESRAAEDGFRKAQKPWLKRLKEVEASKKSYHAARKDEKTAQTRESHAK 175
Query: 241 AEEVAQLAQMKSNDEIRKLRENLERAQRETEELRKQAEK 279
A+ S +++RKL+E +ER +E E+ + Q E+
Sbjct: 176 ADSAV------SQEQLRKLQERVERCAKEAEKTKAQYEQ 208
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.130 0.351
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 101,738,105
Number of Sequences: 539616
Number of extensions: 4217329
Number of successful extensions: 32200
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 257
Number of HSP's successfully gapped in prelim test: 2099
Number of HSP's that attempted gapping in prelim test: 27943
Number of HSP's gapped (non-prelim): 5594
length of query: 285
length of database: 191,569,459
effective HSP length: 116
effective length of query: 169
effective length of database: 128,974,003
effective search space: 21796606507
effective search space used: 21796606507
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 60 (27.7 bits)