BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 023215
(285 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9C8P8|BH080_ARATH Transcription factor bHLH80 OS=Arabidopsis thaliana GN=BHLH80 PE=1
SV=1
Length = 259
Score = 232 bits (591), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 139/241 (57%), Positives = 168/241 (69%), Gaps = 38/241 (15%)
Query: 24 ELSRGGLARLRSAPASWIDALLEEELEDPLKPNQCLTQLLS----SGDPVSVTAGLSLSQ 79
E+SR GL+R+RSAPA+WI+ LLEE+ E+ LKPN CLT+LL+ SG ++
Sbjct: 20 EVSRSGLSRIRSAPATWIETLLEEDEEEGLKPNLCLTELLTGNNNSGGVITSRDDSFEFL 79
Query: 80 SQLDQV--------GFQRQNSSPADLF-------DGYFSNYATPSSYDY----VDVSPNS 120
S ++Q GF RQNSSPAD DGYFSN+ P++YDY VD+SP
Sbjct: 80 SSVEQGLYNHHQGGGFHRQNSSPADFLSGSGSGTDGYFSNFGIPANYDYLSTNVDISPT- 138
Query: 121 NKRAREDNNTQFPSPTAKLNFHSHLKVEQSGQVPGGVSNLVDMDMEKLLEDSVPCRVRAK 180
KR+R D TQF S LK EQ + GG+S ++DM+M+K+ EDSVPCRVRAK
Sbjct: 139 -KRSR-DMETQFSS---------QLKEEQ---MSGGISGMMDMNMDKIFEDSVPCRVRAK 184
Query: 181 RGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEIL 240
RGCATHPRSIAERVRRTRISDRIR+LQ+LVPNMDKQTNTADMLEEAVEYVK LQ QI+ L
Sbjct: 185 RGCATHPRSIAERVRRTRISDRIRRLQELVPNMDKQTNTADMLEEAVEYVKALQSQIQEL 244
Query: 241 S 241
+
Sbjct: 245 T 245
>sp|Q9M0R0|BH081_ARATH Transcription factor bHLH81 OS=Arabidopsis thaliana GN=BHLH81 PE=2
SV=1
Length = 262
Score = 215 bits (547), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 136/230 (59%), Positives = 161/230 (70%), Gaps = 32/230 (13%)
Query: 32 RLRSAPASWIDALLEEELEDPLKPNQCLTQLLS--SGD----------PVSVTAGLSLSQ 79
R+RSAPA+W++ALLEE+ E+ LKPN LT LL+ S D P+ V GL
Sbjct: 31 RIRSAPATWLEALLEEDEEESLKPNLGLTDLLTGNSNDLPTSRGSFEFPIPVEQGL---- 86
Query: 80 SQLDQVGFQRQNSSPADLF---DGYFSNYATPSSYDY----VDVSPNSNKRAREDNNTQF 132
Q GF RQNS+PAD DG+ ++ ++YDY +DVSP S KR+RE F
Sbjct: 87 --YQQGGFHRQNSTPADFLSGSDGFIQSFGIQANYDYLSGNIDVSPGS-KRSRE-MEALF 142
Query: 133 PSPTAKLNFHSHLKVEQS-GQVPGGVSNLVDMDMEKLLEDSVPCRVRAKRGCATHPRSIA 191
SP F S +K EQS GQVP GVS++ DM+ME L+EDSV RVRAKRGCATHPRSIA
Sbjct: 143 SSP----EFTSQMKGEQSSGQVPTGVSSMSDMNMENLMEDSVAFRVRAKRGCATHPRSIA 198
Query: 192 ERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEILS 241
ERVRRTRISDRIRKLQ+LVPNMDKQTNTADMLEEAVEYVK LQ+QI+ L+
Sbjct: 199 ERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKVLQRQIQELT 248
>sp|Q9C690|BH122_ARATH Transcription factor bHLH122 OS=Arabidopsis thaliana GN=BHLH122
PE=1 SV=1
Length = 379
Score = 134 bits (337), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 59/81 (72%), Positives = 73/81 (90%)
Query: 164 DMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADML 223
D+E+LL DS+PC++RAKRGCATHPRSIAERVRRT+IS+R+RKLQDLVPNMD QTNTADML
Sbjct: 291 DIEQLLSDSIPCKIRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDTQTNTADML 350
Query: 224 EEAVEYVKFLQKQIEILSYGR 244
+ AV+Y+K LQ+Q++ L R
Sbjct: 351 DLAVQYIKDLQEQVKALEESR 371
>sp|Q66GR3|BH130_ARATH Transcription factor bHLH130 OS=Arabidopsis thaliana GN=BHLH130
PE=1 SV=1
Length = 359
Score = 133 bits (335), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 64/101 (63%), Positives = 82/101 (81%), Gaps = 3/101 (2%)
Query: 144 HLKVEQSGQVPGGVSNLVDMDMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRI 203
HL + +S S++V +D L+DSVPC++RAKRGCATHPRSIAERVRRTRIS+R+
Sbjct: 249 HLSLPKSSST---ASDMVSVDKYLQLQDSVPCKIRAKRGCATHPRSIAERVRRTRISERM 305
Query: 204 RKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEILSYGR 244
RKLQ+LVPNMDKQTNT+DML+ AV+Y+K LQ+Q +IL+ R
Sbjct: 306 RKLQELVPNMDKQTNTSDMLDLAVDYIKDLQRQYKILNDNR 346
>sp|Q8H102|BH128_ARATH Transcription factor bHLH128 OS=Arabidopsis thaliana GN=BHLH128
PE=1 SV=1
Length = 362
Score = 117 bits (294), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 55/82 (67%), Positives = 70/82 (85%), Gaps = 1/82 (1%)
Query: 159 NLVDMDMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTN 218
N +D M+ L EDSVPC++RAKRGCATHPRSIAER RRTRIS +++KLQDLVPNMDKQT+
Sbjct: 266 NYMDNFMQ-LPEDSVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTS 324
Query: 219 TADMLEEAVEYVKFLQKQIEIL 240
+DML+ AV+++K LQ Q++ L
Sbjct: 325 YSDMLDLAVQHIKGLQHQLQNL 346
>sp|Q9ZW81|BH129_ARATH Transcription factor bHLH129 OS=Arabidopsis thaliana GN=BHLH129
PE=2 SV=2
Length = 297
Score = 116 bits (291), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 55/78 (70%), Positives = 66/78 (84%), Gaps = 3/78 (3%)
Query: 165 MEKLL---EDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTAD 221
ME L+ EDSVPCR RAKRG ATHPRSIAER RRTRIS +++KLQ+LVPNMDKQT+ AD
Sbjct: 218 MENLMNIPEDSVPCRARAKRGFATHPRSIAERERRTRISGKLKKLQELVPNMDKQTSYAD 277
Query: 222 MLEEAVEYVKFLQKQIEI 239
ML+ AVE++K LQ Q+E+
Sbjct: 278 MLDLAVEHIKGLQHQVEV 295
>sp|Q9LSQ3|BH082_ARATH Transcription factor bHLH82 OS=Arabidopsis thaliana GN=BHLH82 PE=2
SV=1
Length = 297
Score = 88.6 bits (218), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 41/69 (59%), Positives = 56/69 (81%), Gaps = 1/69 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
RVRA+RG AT P SIAER+RR RI++R++ LQ+LVPN +K T+ A ML+E +EYV+FLQ
Sbjct: 98 RVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNTNK-TDKASMLDEIIEYVRFLQL 156
Query: 236 QIEILSYGR 244
Q+++LS R
Sbjct: 157 QVKVLSMSR 165
>sp|Q8S3D5|BH069_ARATH Transcription factor bHLH69 OS=Arabidopsis thaliana GN=BHLH69 PE=2
SV=2
Length = 310
Score = 87.4 bits (215), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/85 (51%), Positives = 64/85 (75%), Gaps = 5/85 (5%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
+VRA+RG AT P SIAER+RR RI++R++ LQ+LVPN +K T+ A ML+E ++YVKFLQ
Sbjct: 129 KVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNGNK-TDKASMLDEIIDYVKFLQL 187
Query: 236 QIEILSYGRNSQSIRGDANARQKIN 260
Q+++LS R + G A+A +I+
Sbjct: 188 QVKVLSMSR----LGGAASASSQIS 208
>sp|Q9ZUG9|BH066_ARATH Transcription factor bHLH66 OS=Arabidopsis thaliana GN=BHLH66 PE=2
SV=1
Length = 350
Score = 86.3 bits (212), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 56/70 (80%), Gaps = 1/70 (1%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
++RA+RG AT P SIAER+RR RI++R++ LQ+LVPN +K T+ A ML+E ++YVKFLQ
Sbjct: 136 TKIRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNK-TDKASMLDEIIDYVKFLQ 194
Query: 235 KQIEILSYGR 244
Q+++LS R
Sbjct: 195 LQVKVLSMSR 204
>sp|Q8GY61|BH063_ARATH Transcription factor bHLH63 OS=Arabidopsis thaliana GN=BHLH63 PE=2
SV=1
Length = 335
Score = 82.0 bits (201), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/75 (57%), Positives = 53/75 (70%)
Query: 167 KLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEA 226
K LE + VRA+RG AT SIAERVRR +IS+R++ LQDLVP DK T A ML+E
Sbjct: 162 KELEKTDYIHVRARRGQATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEI 221
Query: 227 VEYVKFLQKQIEILS 241
+ YV+ LQ+QIE LS
Sbjct: 222 INYVQSLQRQIEFLS 236
>sp|Q9SRT2|BH062_ARATH Transcription factor bHLH62 OS=Arabidopsis thaliana GN=BHLH62 PE=2
SV=1
Length = 456
Score = 79.7 bits (195), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 55/79 (69%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
VRA+RG AT S+AERVRR +IS+R++ LQDLVP +K T A ML+E + YV+ LQ+
Sbjct: 257 HVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQR 316
Query: 236 QIEILSYGRNSQSIRGDAN 254
Q+E LS +S + R D N
Sbjct: 317 QVEFLSMKLSSVNTRLDFN 335
>sp|Q9CAA9|BH049_ARATH Transcription factor bHLH49 OS=Arabidopsis thaliana GN=BHLH49 PE=2
SV=1
Length = 486
Score = 78.2 bits (191), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 50/67 (74%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT+ S+AERVRR +IS+R++ LQDLVP +K T A ML+E + YV+ LQ
Sbjct: 301 IHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQ 360
Query: 235 KQIEILS 241
+Q+E LS
Sbjct: 361 RQVEFLS 367
>sp|Q93W88|BH137_ARATH Transcription factor bHLH137 OS=Arabidopsis thaliana GN=BHLH137
PE=2 SV=1
Length = 286
Score = 77.0 bits (188), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 48/66 (72%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
VRA+RG AT S+AERVRR +IS+R+R LQ+LVP DK T A ML+E + YV+ LQ
Sbjct: 135 HVRARRGQATDSHSLAERVRREKISERMRTLQNLVPGCDKVTGKALMLDEIINYVQTLQT 194
Query: 236 QIEILS 241
Q+E LS
Sbjct: 195 QVEFLS 200
>sp|Q9C670|BH076_ARATH Transcription factor bHLH76 OS=Arabidopsis thaliana GN=BHLH76 PE=2
SV=1
Length = 390
Score = 76.6 bits (187), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/99 (47%), Positives = 62/99 (62%), Gaps = 5/99 (5%)
Query: 146 KVEQSGQVPGGVSNLVDMDMEKLLEDSVP---CRVRAKRGCATHPRSIAERVRRTRISDR 202
K ++ Q P SN + EK DS+ +RA+RG AT+ S+AERVRR +IS+R
Sbjct: 191 KKQKDEQSP--TSNANKTNSEKQPSDSLKDGYIHMRARRGQATNSHSLAERVRREKISER 248
Query: 203 IRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEILS 241
++ LQDLVP DK T A ML+E + YV+ LQ QIE LS
Sbjct: 249 MKFLQDLVPGCDKVTGKAVMLDEIINYVQSLQCQIEFLS 287
>sp|Q84WK0|BH085_ARATH Transcription factor bHLH85 OS=Arabidopsis thaliana GN=BHLH85 PE=2
SV=1
Length = 352
Score = 75.1 bits (183), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
+ RA RG AT P+S+ R RR RI++R+R LQ+LVPN K + + MLEEAV YVKFLQ
Sbjct: 265 KTRASRGAATDPQSLYARKRRERINERLRILQNLVPNGTK-VDISTMLEEAVHYVKFLQL 323
Query: 236 QIEILS 241
QI++LS
Sbjct: 324 QIKLLS 329
>sp|Q6NKN9|BH074_ARATH Transcription factor bHLH74 OS=Arabidopsis thaliana GN=BHLH74 PE=2
SV=1
Length = 366
Score = 75.1 bits (183), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 50/67 (74%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
+RA+RG AT+ S+AERVRR +IS+R+R LQ+LVP +K T A ML+E + YV+ LQ
Sbjct: 204 IHMRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQ 263
Query: 235 KQIEILS 241
+Q+E LS
Sbjct: 264 QQVEFLS 270
>sp|Q9FJL4|BH078_ARATH Transcription factor bHLH78 OS=Arabidopsis thaliana GN=BHLH78 PE=2
SV=1
Length = 498
Score = 75.1 bits (183), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 48/67 (71%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT S+AERVRR +I +R++ LQDLVP +K T A ML+E + YV+ LQ
Sbjct: 299 IHVRARRGQATDSHSLAERVRREKIGERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQ 358
Query: 235 KQIEILS 241
+Q+E LS
Sbjct: 359 RQVEFLS 365
>sp|Q7XHI9|BH084_ARATH Transcription factor bHLH84 OS=Arabidopsis thaliana GN=BHLH84 PE=2
SV=1
Length = 328
Score = 74.3 bits (181), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
+ RA RG AT P+S+ R RR RI++R+R LQ LVPN K + + MLEEAV+YVKFLQ
Sbjct: 236 KTRASRGAATDPQSLYARKRRERINERLRILQHLVPNGTK-VDISTMLEEAVQYVKFLQL 294
Query: 236 QIEILS 241
QI++LS
Sbjct: 295 QIKLLS 300
>sp|Q8LEG1|BH054_ARATH Transcription factor bHLH54 OS=Arabidopsis thaliana GN=BHLH54 PE=2
SV=1
Length = 258
Score = 74.3 bits (181), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 54/78 (69%), Gaps = 1/78 (1%)
Query: 164 DMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADML 223
D EK SV + RA +G AT P+S+ R RR +I++R++ LQ+LVPN K + + ML
Sbjct: 154 DDEKASVTSVKGKTRATKGTATDPQSLYARKRREKINERLKTLQNLVPNGTK-VDISTML 212
Query: 224 EEAVEYVKFLQKQIEILS 241
EEAV YVKFLQ QI++LS
Sbjct: 213 EEAVHYVKFLQLQIKLLS 230
>sp|Q9LK48|BH077_ARATH Transcription factor bHLH77 OS=Arabidopsis thaliana GN=BHLH77 PE=2
SV=1
Length = 371
Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 56/89 (62%)
Query: 177 VRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQ 236
VRA+RG AT S+AER RR +IS+R+ LQDLVP ++ T A ML+E + YV+ LQ+Q
Sbjct: 191 VRARRGQATDSHSLAERARREKISERMTLLQDLVPGCNRITGKAVMLDEIINYVQSLQRQ 250
Query: 237 IEILSYGRNSQSIRGDANARQKINLRSYQ 265
+E LS + + R + NA ++ Q
Sbjct: 251 VEFLSMKLATVNPRMEFNANASLSTEMIQ 279
>sp|Q8GWK7|BEE3_ARATH Transcription factor BEE 3 OS=Arabidopsis thaliana GN=BEE3 PE=2
SV=1
Length = 261
Score = 72.8 bits (177), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 51/79 (64%)
Query: 177 VRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQ 236
VRA+RG AT SIAERVRR +I++R++ LQD+VP K A ML+E + YV+ LQ Q
Sbjct: 147 VRARRGQATDSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYVQSLQNQ 206
Query: 237 IEILSYGRNSQSIRGDANA 255
+E LS + S D N+
Sbjct: 207 VEFLSMKLTAASSYYDFNS 225
>sp|Q93VJ4|BEE2_ARATH Transcription factor BEE 2 OS=Arabidopsis thaliana GN=BEE2 PE=2
SV=1
Length = 304
Score = 72.8 bits (177), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/147 (34%), Positives = 75/147 (51%), Gaps = 4/147 (2%)
Query: 96 DLFDGYFSNYATPSSYDYVDVSPNSNKRAREDNNTQFPSPTAKLNFHSHLKVEQSGQVP- 154
D DG S SS+ V N + RA N + P + +K E +
Sbjct: 62 DTTDGCISR---TSSFHMEPVKNNGHSRAITLQNKRKPEGKTEKREKKKIKAEDETEPSM 118
Query: 155 GGVSNLVDMDMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMD 214
G SN+ + + ++ VRA+RG AT S+AER RR +IS +++ LQD+VP +
Sbjct: 119 KGKSNMSNTETSSEIQKPDYIHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCN 178
Query: 215 KQTNTADMLEEAVEYVKFLQKQIEILS 241
K T A ML+E + YV+ LQ+Q+E LS
Sbjct: 179 KVTGKAGMLDEIINYVQSLQQQVEFLS 205
>sp|Q8GZ13|BEE1_ARATH Transcription factor BEE 1 OS=Arabidopsis thaliana GN=BEE1 PE=2
SV=1
Length = 260
Score = 72.4 bits (176), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 51/81 (62%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT S+AERVRR +I++R+R LQD+VP K A ML+E + YV+ LQ
Sbjct: 143 VHVRARRGQATDSHSLAERVRRGKINERLRCLQDMVPGCYKAMGMATMLDEIINYVQSLQ 202
Query: 235 KQIEILSYGRNSQSIRGDANA 255
Q+E LS + S D N+
Sbjct: 203 NQVEFLSMKLTAASSFYDFNS 223
>sp|A4D998|BH075_ARATH Transcription factor bHLH75 OS=Arabidopsis thaliana GN=BHLH75 PE=2
SV=1
Length = 223
Score = 72.0 bits (175), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 52/80 (65%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
VRAKRG AT S+AERVRR +I++R++ LQDLVP K A ML+ ++YV+ LQ
Sbjct: 103 HVRAKRGQATDSHSLAERVRREKINERLKCLQDLVPGCYKAMGMAVMLDVIIDYVRSLQN 162
Query: 236 QIEILSYGRNSQSIRGDANA 255
QIE LS ++ S D N+
Sbjct: 163 QIEFLSMKLSAASACYDLNS 182
>sp|Q9ZPW3|BH064_ARATH Transcription factor bHLH64 OS=Arabidopsis thaliana GN=BHLH64 PE=2
SV=3
Length = 337
Score = 71.6 bits (174), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 47/65 (72%)
Query: 177 VRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQ 236
VRA+RG AT S+AER RR +IS +++ LQD+VP +K T A ML+E + YV+ LQ+Q
Sbjct: 185 VRARRGQATDRHSLAERARREKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQRQ 244
Query: 237 IEILS 241
+E LS
Sbjct: 245 VEFLS 249
>sp|Q3E7L7|BH139_ARATH Transcription factor bHLH139 OS=Arabidopsis thaliana GN=BHLH139
PE=4 SV=1
Length = 223
Score = 71.6 bits (174), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 50/70 (71%), Gaps = 1/70 (1%)
Query: 172 SVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVK 231
S+ + +A RG A+ P+S+ R RR RI+DR++ LQ LVPN K + + MLE+AV YVK
Sbjct: 127 SLKRKAKANRGIASDPQSLYARKRRERINDRLKTLQSLVPNGTK-VDISTMLEDAVHYVK 185
Query: 232 FLQKQIEILS 241
FLQ QI++LS
Sbjct: 186 FLQLQIKLLS 195
>sp|Q8VZ02|BH048_ARATH Transcription factor bHLH48 OS=Arabidopsis thaliana GN=BHLH48 PE=2
SV=1
Length = 327
Score = 69.7 bits (169), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 56/85 (65%), Gaps = 1/85 (1%)
Query: 171 DSVP-CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEY 229
D +P VRA+RG AT S+AER RR +I+ R++ LQ+LVP DK TA +L+E + +
Sbjct: 178 DKLPYVHVRARRGQATDNHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINH 237
Query: 230 VKFLQKQIEILSYGRNSQSIRGDAN 254
V+ LQ+Q+E+LS + + R D N
Sbjct: 238 VQTLQRQVEMLSMRLAAVNPRIDFN 262
>sp|Q0JXE7|BPE_ARATH Transcription factor BPE OS=Arabidopsis thaliana GN=BPE PE=2 SV=1
Length = 343
Score = 68.6 bits (166), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 47/65 (72%)
Query: 177 VRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQ 236
VRA+RG AT S+AER RR +IS+R++ LQDLVP +K A +L+E + Y++ LQ+Q
Sbjct: 136 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 195
Query: 237 IEILS 241
+E LS
Sbjct: 196 VEFLS 200
>sp|O22768|UNE12_ARATH Transcription factor UNE12 OS=Arabidopsis thaliana GN=UNE12 PE=2
SV=2
Length = 310
Score = 67.0 bits (162), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 58/73 (79%), Gaps = 1/73 (1%)
Query: 172 SVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVK 231
S+ RVRA+RG AT P SIAER+RR RI++RIR LQ+LVP ++K T+ A M++E V+YVK
Sbjct: 141 SIRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNK-TDRAAMIDEIVDYVK 199
Query: 232 FLQKQIEILSYGR 244
FL+ Q+++LS R
Sbjct: 200 FLRLQVKVLSMSR 212
>sp|Q93Y00|BH007_ARATH Transcription factor bHLH7 OS=Arabidopsis thaliana GN=BHLH7 PE=2
SV=1
Length = 302
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/69 (59%), Positives = 56/69 (81%), Gaps = 1/69 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
RVRA+RG AT P SIAER+RR RI++RIR LQ+LVP ++K T+ A M++E V+YVKFL+
Sbjct: 143 RVRARRGQATDPHSIAERLRRERIAERIRSLQELVPTVNK-TDRAAMIDEIVDYVKFLRL 201
Query: 236 QIEILSYGR 244
Q+++LS R
Sbjct: 202 QVKVLSMSR 210
>sp|Q9LV17|BH079_ARATH Transcription factor bHLH79 OS=Arabidopsis thaliana GN=BHLH79 PE=2
SV=1
Length = 281
Score = 65.1 bits (157), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 46/65 (70%)
Query: 177 VRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQ 236
VRA+RG AT S+AER RR +IS+++ LQD++P +K A +L+E + Y++ LQ+Q
Sbjct: 153 VRARRGQATDRHSLAERARREKISEKMTALQDIIPGCNKIIGKALVLDEIINYIQSLQRQ 212
Query: 237 IEILS 241
+E LS
Sbjct: 213 VEFLS 217
>sp|Q8GZM7|PIF1_ARATH Transcription factor PIF1 OS=Arabidopsis thaliana GN=PIF1 PE=1 SV=1
Length = 478
Score = 60.5 bits (145), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Query: 179 AKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIE 238
KR A +++ER RR RI++R++ LQ+L+P +K ++ A ML+EA+EY+K LQ QI+
Sbjct: 280 TKRSRAAEVHNLSERKRRDRINERMKALQELIPRCNK-SDKASMLDEAIEYMKSLQLQIQ 338
Query: 239 ILSYG 243
++S G
Sbjct: 339 MMSMG 343
>sp|O80536|PIF3_ARATH Transcription factor PIF3 OS=Arabidopsis thaliana GN=PIF3 PE=1 SV=1
Length = 524
Score = 60.5 bits (145), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Query: 179 AKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIE 238
+KR + +++ER RR RI++++R LQ+L+PN +K + A ML+EA+EY+K LQ Q++
Sbjct: 339 SKRSRSAEVHNLSERRRRDRINEKMRALQELIPNCNK-VDKASMLDEAIEYLKSLQLQVQ 397
Query: 239 ILSYG 243
I+S
Sbjct: 398 IMSMA 402
>sp|Q9C707|BH083_ARATH Transcription factor bHLH83 OS=Arabidopsis thaliana GN=BHLH83 PE=2
SV=1
Length = 298
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 42/55 (76%), Gaps = 1/55 (1%)
Query: 187 PRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEILS 241
P+S+A + RR RIS+R++ LQ+LVPN K + MLE+A+ YVKFLQ Q+++L+
Sbjct: 205 PQSLAAKNRRERISERLKILQELVPNGTK-VDLVTMLEKAISYVKFLQVQVKVLA 258
>sp|Q7XAQ6|LAX_ORYSJ Transcription factor LAX PANICLE OS=Oryza sativa subsp. japonica
GN=LAX PE=1 SV=1
Length = 215
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 184 ATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEI 239
+T P+S+A R RR RISDR R L+ LVP K +T MLE+A+ YVKFL+ Q+ +
Sbjct: 41 STDPQSVAARERRHRISDRFRVLRSLVPGGSK-MDTVSMLEQAIHYVKFLKAQVTL 95
>sp|Q9FJ00|BH086_ARATH Putative transcription factor bHLH086 OS=Arabidopsis thaliana
GN=BHLH86 PE=4 SV=2
Length = 307
Score = 59.3 bits (142), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 42/55 (76%), Gaps = 1/55 (1%)
Query: 187 PRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEILS 241
P+S+A + RR RIS+R++ LQ+LVPN K + MLE+A+ YVKFLQ Q+++L+
Sbjct: 211 PQSLAAKNRRERISERLKVLQELVPNGTK-VDLVTMLEKAIGYVKFLQVQVKVLA 264
>sp|Q9M041|BH140_ARATH Transcription factor bHLH140 OS=Arabidopsis thaliana GN=BHLH140
PE=4 SV=1
Length = 912
Score = 59.3 bits (142), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
R R+ +T P+S+A R RR RISDR + LQ +VP K +T ML+EA+ YVKFL+
Sbjct: 36 RSRSTSTLSTDPQSVAARDRRHRISDRFKILQSMVPGGAKM-DTVSMLDEAISYVKFLKA 94
Query: 236 QI 237
QI
Sbjct: 95 QI 96
>sp|Q8S3D2|BH087_ARATH Transcription factor bHLH87 OS=Arabidopsis thaliana GN=BHLH87 PE=2
SV=1
Length = 373
Score = 57.8 bits (138), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 184 ATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEIL 240
+T P+++A R RR RIS++IR LQ LVP K +TA ML+EA Y+KFL+ Q++ L
Sbjct: 276 STDPQTVAARQRRERISEKIRVLQTLVPGGTK-MDTASMLDEAANYLKFLRAQVKAL 331
>sp|Q9FUA4|SPT_ARATH Transcription factor SPATULA OS=Arabidopsis thaliana GN=SPT PE=1
SV=1
Length = 373
Score = 55.5 bits (132), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 46/61 (75%), Gaps = 3/61 (4%)
Query: 181 RGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEIL 240
R H +++E+ RR+RI+++++ LQ L+PN +K T+ A ML+EA+EY+K LQ Q+++L
Sbjct: 197 RAAEVH--NLSEKRRRSRINEKMKALQSLIPNSNK-TDKASMLDEAIEYLKQLQLQVQML 253
Query: 241 S 241
+
Sbjct: 254 T 254
>sp|Q9FHA2|ALC_ARATH Transcription factor ALC OS=Arabidopsis thaliana GN=ALC PE=2 SV=1
Length = 210
Score = 55.1 bits (131), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 45/62 (72%), Gaps = 1/62 (1%)
Query: 180 KRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEI 239
KR +++E+ RR++I+++++ LQ L+PN +K T+ A ML+EA+EY+K LQ Q++
Sbjct: 90 KRNIDAQFHNLSEKKRRSKINEKMKALQKLIPNSNK-TDKASMLDEAIEYLKQLQLQVQT 148
Query: 240 LS 241
L+
Sbjct: 149 LA 150
>sp|Q8GZ38|UNE10_ARATH Transcription factor UNE10 OS=Arabidopsis thaliana GN=UNE10 PE=2
SV=1
Length = 399
Score = 54.7 bits (130), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 177 VRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQ 236
V KR A + +ER RR +I+ R++ LQ LVPN K T+ A ML+E +EY+K LQ Q
Sbjct: 207 VSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSK-TDKASMLDEVIEYLKQLQAQ 265
Query: 237 IEILS 241
+ ++S
Sbjct: 266 VSMMS 270
>sp|O81313|IND_ARATH Transcription factor IND OS=Arabidopsis thaliana GN=IND PE=1 SV=3
Length = 198
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Query: 187 PRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEIL 240
P+++ R RR RIS++IR L+ +VP K +TA ML+EA+ Y KFL++Q+ IL
Sbjct: 122 PQTVVARRRRERISEKIRILKRIVPGGAK-MDTASMLDEAIRYTKFLKRQVRIL 174
>sp|Q9SFZ3|BH110_ARATH Transcription factor bHLH110 OS=Arabidopsis thaliana GN=BHLH110
PE=2 SV=2
Length = 453
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 47/81 (58%), Gaps = 9/81 (11%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
RV ++ C +VR+ ++ DRI LQ LV K T+TA +L EA+ Y+KFLQ
Sbjct: 321 RVESRSSCPPF------KVRKEKLGDRIAALQQLVSPFGK-TDTASVLMEAIGYIKFLQS 373
Query: 236 QIEILS--YGRNSQSIRGDAN 254
QIE LS Y R S++ G A+
Sbjct: 374 QIETLSVPYMRASRNRPGKAS 394
>sp|Q9M0X8|BH114_ARATH Transcription factor bHLH114 OS=Arabidopsis thaliana GN=BHLH114
PE=2 SV=2
Length = 298
Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 36/49 (73%), Gaps = 1/49 (2%)
Query: 193 RVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEILS 241
+VR+ ++ DRI LQ LV K T+TA +L EAVEY+KFLQ+Q+ +LS
Sbjct: 173 KVRKEKLGDRITALQQLVSPFGK-TDTASVLNEAVEYIKFLQEQVTVLS 220
>sp|Q7XHI7|BH127_ARATH Transcription factor bHLH127 OS=Arabidopsis thaliana GN=BHLH127
PE=2 SV=1
Length = 307
Score = 51.6 bits (122), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Query: 180 KRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQI 237
KR A ++AER RR +I++R++ LQ L+P +K T + MLE+ +EYVK L+ QI
Sbjct: 147 KRSRAAEMHNLAERRRREKINERMKTLQQLIPRCNKSTKVS-MLEDVIEYVKSLEMQI 203
>sp|Q9LT67|BH113_ARATH Transcription factor bHLH113 OS=Arabidopsis thaliana GN=BHLH113
PE=2 SV=1
Length = 270
Score = 51.6 bits (122), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 49/91 (53%), Gaps = 8/91 (8%)
Query: 193 RVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEIL------SYGRNS 246
+VR+ R+ +RI LQ LV K T+ A +L EA+ Y+KFLQ QI++L ++ +
Sbjct: 154 KVRKERLGERIAALQQLVSPYGK-TDAASVLHEAMGYIKFLQDQIQVLCSPYLINHSLDG 212
Query: 247 QSIRGDANARQKI-NLRSYQICNYIYKVKVH 276
+ GD A K +LRS +C VH
Sbjct: 213 GVVTGDVMAAMKAKDLRSRGLCLVPVSSTVH 243
>sp|Q9SVU6|BH023_ARATH Transcription factor bHLH23 OS=Arabidopsis thaliana GN=BHLH23 PE=2
SV=1
Length = 413
Score = 51.2 bits (121), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 179 AKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIE 238
+KR A ++ER RR +I++ ++ LQ+L+P K T+ + ML++ +EYVK LQ QI+
Sbjct: 273 SKRSRAAIMHKLSERRRRQKINEMMKALQELLPRCTK-TDRSSMLDDVIEYVKSLQSQIQ 331
Query: 239 ILSYG 243
+ S G
Sbjct: 332 MFSMG 336
>sp|Q8L5W8|PIL1_ARATH Transcription factor PIL1 OS=Arabidopsis thaliana GN=PIL1 PE=1 SV=1
Length = 416
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 179 AKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIE 238
KR +T + ER RR + ++R LQDL+PN K + A +L+EA++Y++ LQ Q++
Sbjct: 225 TKRKRSTEVHKLYERKRRDEFNKKMRALQDLLPNCYKD-DKASLLDEAIKYMRTLQLQVQ 283
Query: 239 ILSYG 243
++S G
Sbjct: 284 MMSMG 288
>sp|Q94JL3|BH112_ARATH Transcription factor bHLH112 OS=Arabidopsis thaliana GN=BHLH112
PE=2 SV=1
Length = 393
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Query: 179 AKRGCATHPRSIAE-RVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQI 237
AK+ T P + +VR+ + D+I LQ LV K T+TA +L+EA+EY+KFL Q+
Sbjct: 265 AKKPRVTTPSPLPTFKVRKENLRDQITSLQQLVSPFGK-TDTASVLQEAIEYIKFLHDQV 323
Query: 238 EILS 241
+LS
Sbjct: 324 TVLS 327
>sp|Q9LEZ3|BIM1_ARATH Transcription factor BIM1 OS=Arabidopsis thaliana GN=BIM1 PE=1 SV=2
Length = 529
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
Query: 189 SIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIE--ILSY 242
S E+ RR++I+DR + L+ L+PN D++ + A L E +EY++FLQ++ + + SY
Sbjct: 282 SATEQRRRSKINDRFQMLRQLIPNSDQKRDKASFLLEVIEYIQFLQEKADKYVTSY 337
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.131 0.376
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 111,471,254
Number of Sequences: 539616
Number of extensions: 4818689
Number of successful extensions: 36556
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 211
Number of HSP's successfully gapped in prelim test: 146
Number of HSP's that attempted gapping in prelim test: 32857
Number of HSP's gapped (non-prelim): 2982
length of query: 285
length of database: 191,569,459
effective HSP length: 116
effective length of query: 169
effective length of database: 128,974,003
effective search space: 21796606507
effective search space used: 21796606507
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 60 (27.7 bits)