Query 023215
Match_columns 285
No_of_seqs 190 out of 783
Neff 4.0
Searched_HMMs 29240
Date Mon Mar 25 03:03:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023215.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/023215hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4ati_A MITF, microphthalmia-as 99.7 7.1E-17 2.4E-21 132.5 6.9 70 174-243 17-89 (118)
2 1am9_A Srebp-1A, protein (ster 99.6 4.8E-17 1.6E-21 125.6 3.1 63 183-245 5-67 (82)
3 4h10_B Circadian locomoter out 99.6 1.1E-15 3.6E-20 116.5 4.4 62 181-242 5-66 (71)
4 1an4_A Protein (upstream stimu 99.5 1.5E-15 5.1E-20 111.8 2.7 56 182-237 3-63 (65)
5 1a0a_A BHLH, protein (phosphat 99.5 8.9E-16 3E-20 113.8 1.4 55 184-238 2-62 (63)
6 4h10_A ARYL hydrocarbon recept 99.5 4E-15 1.4E-19 113.5 0.7 56 180-235 5-63 (73)
7 1nkp_B MAX protein, MYC proto- 99.4 1.4E-13 4.7E-18 105.6 5.9 58 186-244 4-63 (83)
8 1hlo_A Protein (transcription 99.4 1.3E-13 4.5E-18 105.4 5.5 60 185-244 13-73 (80)
9 3u5v_A Protein MAX, transcript 99.4 1.8E-13 6.1E-18 105.1 4.9 59 185-243 6-67 (76)
10 1nkp_A C-MYC, MYC proto-oncoge 99.4 3.5E-13 1.2E-17 105.5 6.3 58 186-243 8-67 (88)
11 1nlw_A MAD protein, MAX dimeri 99.2 1.4E-11 4.7E-16 95.1 6.4 58 186-243 3-62 (80)
12 1mdy_A Protein (MYOD BHLH doma 99.0 6E-11 2.1E-15 89.3 2.6 53 185-237 13-66 (68)
13 4f3l_A Mclock, circadian locom 99.0 2.4E-10 8.4E-15 105.5 6.1 58 180-237 8-65 (361)
14 2ql2_B Neurod1, neurogenic dif 98.9 1.4E-09 4.9E-14 79.9 5.7 52 187-238 5-58 (60)
15 4f3l_B BMAL1B; BHLH, PAS, circ 98.9 4.6E-10 1.6E-14 105.2 2.9 56 180-236 9-68 (387)
16 4ath_A MITF, microphthalmia-as 98.8 4.9E-09 1.7E-13 82.1 5.7 49 195-243 3-54 (83)
17 2lfh_A DNA-binding protein inh 98.4 8.3E-08 2.8E-12 72.7 2.8 46 190-235 20-67 (68)
18 4aya_A DNA-binding protein inh 97.9 2.2E-05 7.4E-10 63.1 6.7 51 192-242 33-85 (97)
19 3muj_A Transcription factor CO 44.3 28 0.00095 29.3 4.7 37 197-233 94-133 (138)
20 1p3q_Q VPS9P, vacuolar protein 40.4 31 0.0011 24.7 3.8 26 190-215 3-28 (54)
21 3p8c_D Wiskott-aldrich syndrom 39.4 6.2 0.00021 36.6 0.0 19 22-40 196-214 (279)
22 3ntt_A Capsid protein; gene th 35.8 11 0.00038 39.2 1.1 12 36-48 283-294 (724)
23 1f1f_A Cytochrome C6; heme, pr 30.4 1E+02 0.0036 21.1 5.3 40 196-236 48-87 (89)
24 2ke4_A CDC42-interacting prote 27.2 77 0.0027 24.8 4.5 57 188-245 10-86 (98)
25 2wt7_A Proto-oncogene protein 24.6 1E+02 0.0035 21.8 4.4 16 227-242 22-37 (63)
26 3ph2_B Cytochrome C6; photosyn 24.0 1.6E+02 0.0055 19.9 5.3 39 197-236 46-84 (86)
27 1m2x_A Class B carbapenemase B 23.9 40 0.0014 27.7 2.3 32 207-239 190-221 (223)
28 1cyi_A Cytochrome C6, cytochro 23.4 1.6E+02 0.0056 20.2 5.4 39 196-235 46-84 (90)
29 1gdv_A Cytochrome C6; RED ALGA 22.6 1.8E+02 0.0062 19.6 5.3 37 198-235 46-82 (85)
30 1c6r_A Cytochrome C6; electron 21.1 1.8E+02 0.0063 19.9 5.2 39 196-235 47-85 (89)
31 1a7t_A Metallo-beta-lactamase; 20.0 66 0.0023 26.5 3.0 32 207-239 200-231 (232)
No 1
>4ati_A MITF, microphthalmia-associated transcription factor; DNA-binding protein-DNA complex, melanoma; 2.60A {Mus musculus} PDB: 4atk_A
Probab=99.67 E-value=7.1e-17 Score=132.53 Aligned_cols=70 Identities=29% Similarity=0.437 Sum_probs=51.6
Q ss_pred CccccccccCCCCCccHHHHHHHHHHHHHHHHHhccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHhcc
Q 023215 174 PCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDK---QTNTADMLEEAVEYVKFLQKQIEILSYG 243 (285)
Q Consensus 174 ~~~~raKrg~a~~~HsiaERrRRerIneri~~Lq~LVP~~~K---~~DKAsIL~eAI~YIK~LQ~QVq~Le~~ 243 (285)
+++..+|+++++.+|+++||+||++||++|.+|++|||++.+ +++|++||.+||+||++||.+++.|+..
T Consensus 17 ~~~~~~k~~~kr~~Hn~~ERrRR~~In~~~~~L~~lvP~~~~~~~k~~Ka~IL~~aieYIk~Lq~~~~~l~~~ 89 (118)
T 4ati_A 17 EARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKASVDYIRKLQREQQRAKDL 89 (118)
T ss_dssp --------------CHHHHHHHHHHHHHHHHHHHHHSCCC----CCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccCccccCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456778888899999999999999999999999999998853 4789999999999999999999999864
No 2
>1am9_A Srebp-1A, protein (sterol regulatory element binding protein 1A); basic-helix-loop- helix-leucine zipper, transcription factor; HET: DNA; 2.30A {Homo sapiens} SCOP: a.38.1.1 PDB: 1ukl_C
Probab=99.64 E-value=4.8e-17 Score=125.63 Aligned_cols=63 Identities=27% Similarity=0.434 Sum_probs=57.0
Q ss_pred CCCCCccHHHHHHHHHHHHHHHHHhccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHhcccC
Q 023215 183 CATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEILSYGRN 245 (285)
Q Consensus 183 ~a~~~HsiaERrRRerIneri~~Lq~LVP~~~K~~DKAsIL~eAI~YIK~LQ~QVq~Le~~~~ 245 (285)
.++.+|+++||+||++||++|.+|++|||+++.++||++||.+||+||++||.+++.|+.+..
T Consensus 5 ~rr~~H~~~ErrRR~~in~~f~~L~~lvP~~~~k~~Ka~IL~~Ai~YI~~Lq~~~~~L~~e~~ 67 (82)
T 1am9_A 5 EKRTAHNAIEKRYRSSINDKIIELKDLVVGTEAKLNKSAVLRKAIDYIRFLQHSNQKLKQENL 67 (82)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhhhhHHHHHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345679999999999999999999999999855599999999999999999999999997543
No 3
>4h10_B Circadian locomoter output cycles protein kaput; BHLH, circadian transcription, transcription-DNA complex; 2.40A {Homo sapiens}
Probab=99.57 E-value=1.1e-15 Score=116.50 Aligned_cols=62 Identities=15% Similarity=0.337 Sum_probs=54.6
Q ss_pred ccCCCCCccHHHHHHHHHHHHHHHHHhccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHhc
Q 023215 181 RGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEILSY 242 (285)
Q Consensus 181 rg~a~~~HsiaERrRRerIneri~~Lq~LVP~~~K~~DKAsIL~eAI~YIK~LQ~QVq~Le~ 242 (285)
...++.+|+++||+||++||++|.+|++|||....++||++||..||+||+.||.++.=|+-
T Consensus 5 ~~~kR~~Hn~iErrRRd~IN~~i~eL~~LvP~~~~K~dK~sIL~~aI~yik~Lq~~~~~~~~ 66 (71)
T 4h10_B 5 DKAKRVSRNKSEKKRRDQFNVLIKELGSMLPGNARKMDKSTVLQKSIDFLRKHKEITAWLEH 66 (71)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSSCCSCCCHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred hhHHhhhhhHHHhhHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHHHHHhhhHHHh
Confidence 34455689999999999999999999999997664599999999999999999999877653
No 4
>1an4_A Protein (upstream stimulatory factor); protein-DNA complex, double helix, overhanging base, transcription/DNA complex; HET: DNA; 2.90A {Homo sapiens} SCOP: a.38.1.1
Probab=99.54 E-value=1.5e-15 Score=111.82 Aligned_cols=56 Identities=21% Similarity=0.385 Sum_probs=50.3
Q ss_pred cCCCCCccHHHHHHHHHHHHHHHHHhccCCCCCC-----CCChhhHHHHHHHHHHHHHHHH
Q 023215 182 GCATHPRSIAERVRRTRISDRIRKLQDLVPNMDK-----QTNTADMLEEAVEYVKFLQKQI 237 (285)
Q Consensus 182 g~a~~~HsiaERrRRerIneri~~Lq~LVP~~~K-----~~DKAsIL~eAI~YIK~LQ~QV 237 (285)
..++..|+++||+||++||+.|.+|++|||.+.. +++|++||.+||+||++||.++
T Consensus 3 ~~rr~~H~~~Er~RR~~in~~~~~L~~lvP~~~~~~~~~k~~Ka~IL~~ai~YI~~Lq~~~ 63 (65)
T 1an4_A 3 EKRRAQHNEVERRRRDKINNWIVQLSKIIPDSSMESTKSGQSKGGILSKASDYIQELRQSN 63 (65)
T ss_dssp CCCCCSSHHHHHHHHHHHHHHHHHHHHHSCCCCCCSSTTCCCTTTTTTTTHHHHHHHHTTT
T ss_pred HHHHHhhchHHHHHHHHHHHHHHHHHHHCcCcccccccCCCCHHHHHHHHHHHHHHHHHHh
Confidence 3456789999999999999999999999998862 3899999999999999999875
No 5
>1a0a_A BHLH, protein (phosphate system positive regulatory protein PHO4); transcription factor, basic helix loop helix; HET: DNA; 2.80A {Saccharomyces cerevisiae} SCOP: a.38.1.1
Probab=99.54 E-value=8.9e-16 Score=113.83 Aligned_cols=55 Identities=27% Similarity=0.423 Sum_probs=48.6
Q ss_pred CCCCccHHHHHHHHHHHHHHHHHhccCCCCCC------CCChhhHHHHHHHHHHHHHHHHH
Q 023215 184 ATHPRSIAERVRRTRISDRIRKLQDLVPNMDK------QTNTADMLEEAVEYVKFLQKQIE 238 (285)
Q Consensus 184 a~~~HsiaERrRRerIneri~~Lq~LVP~~~K------~~DKAsIL~eAI~YIK~LQ~QVq 238 (285)
++.+|+++||+||++||..|.+|+.|||.+.+ +++||+||+.||+||++||++|+
T Consensus 2 kr~~H~~aEr~RR~rIn~~~~~L~~LlP~~~~~~~~~~k~sKa~iL~~Ai~YIk~Lq~~~~ 62 (63)
T 1a0a_A 2 KRESHKHAEQARRNRLAVALHELASLIPAEWKQQNVSAAPSKATTVEAACRYIRHLQQNGS 62 (63)
T ss_dssp CTTGGGGGTHHHHHHHHHHHHHHHHTSCHHHHTSSCCCCSCTTHHHHHHHHHHHHHHTCSC
T ss_pred cccchhHHHHHHHHHHHHHHHHHHHHCCCcccccccCCcccHHHHHHHHHHHHHHHHHHhh
Confidence 45789999999999999999999999997632 36799999999999999998763
No 6
>4h10_A ARYL hydrocarbon receptor nuclear translocator-LI 1; BHLH, circadian transcription, transcription-DNA complex; 2.40A {Homo sapiens}
Probab=99.48 E-value=4e-15 Score=113.52 Aligned_cols=56 Identities=27% Similarity=0.381 Sum_probs=48.9
Q ss_pred cccCCCCCccHHHHHHHHHHHHHHHHHhccCCCCC---CCCChhhHHHHHHHHHHHHHH
Q 023215 180 KRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMD---KQTNTADMLEEAVEYVKFLQK 235 (285)
Q Consensus 180 Krg~a~~~HsiaERrRRerIneri~~Lq~LVP~~~---K~~DKAsIL~eAI~YIK~LQ~ 235 (285)
|..+++..|+++||+||++||+.|.+|+.|||.+. .++||++||+.||+||+.|+.
T Consensus 5 k~~~rR~~H~~~ERrRR~rIN~~l~eL~~LvP~~~~~~~KldKasIL~~tV~ylk~l~~ 63 (73)
T 4h10_A 5 RIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRG 63 (73)
T ss_dssp CTHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHTCSSCCCHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHhcchHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHhc
Confidence 34455678999999999999999999999999873 239999999999999999974
No 7
>1nkp_B MAX protein, MYC proto-oncogene protein; transcription, DNA, BHLHZ, heterodimer, transcription/DNA complex; 1.80A {Homo sapiens} SCOP: a.38.1.1 PDB: 1an2_A* 1r05_A 1nlw_B
Probab=99.43 E-value=1.4e-13 Score=105.65 Aligned_cols=58 Identities=28% Similarity=0.527 Sum_probs=53.1
Q ss_pred CCccHHHHHHHHHHHHHHHHHhccCCCC--CCCCChhhHHHHHHHHHHHHHHHHHHHhccc
Q 023215 186 HPRSIAERVRRTRISDRIRKLQDLVPNM--DKQTNTADMLEEAVEYVKFLQKQIEILSYGR 244 (285)
Q Consensus 186 ~~HsiaERrRRerIneri~~Lq~LVP~~--~K~~DKAsIL~eAI~YIK~LQ~QVq~Le~~~ 244 (285)
..|+..||+||++||+.|..|+++||.+ .| ++|++||..||+||++|+.+++.|+...
T Consensus 4 ~~hn~~Er~RR~~in~~f~~Lr~lvP~~~~~k-~sK~~iL~~Ai~YI~~L~~~~~~l~~e~ 63 (83)
T 1nkp_B 4 AHHNALERKRRDHIKDSFHSLRDSVPSLQGEK-ASRAQILDKATEYIQYMRRKNHTHQQDI 63 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTSGGGTTSC-CCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHhhhHHHHHHHHHHHHHHHHHHHCCCCCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4699999999999999999999999975 55 9999999999999999999999988643
No 8
>1hlo_A Protein (transcription factor MAX); transcriptional regulation, DNA binding, complex (transcription factor MAX/DNA), transcription/DNA complex; HET: DNA; 2.80A {Homo sapiens} SCOP: a.38.1.1
Probab=99.42 E-value=1.3e-13 Score=105.38 Aligned_cols=60 Identities=25% Similarity=0.495 Sum_probs=54.1
Q ss_pred CCCccHHHHHHHHHHHHHHHHHhccCCCCC-CCCChhhHHHHHHHHHHHHHHHHHHHhccc
Q 023215 185 THPRSIAERVRRTRISDRIRKLQDLVPNMD-KQTNTADMLEEAVEYVKFLQKQIEILSYGR 244 (285)
Q Consensus 185 ~~~HsiaERrRRerIneri~~Lq~LVP~~~-K~~DKAsIL~eAI~YIK~LQ~QVq~Le~~~ 244 (285)
+..|+..||+||..||+.|..|+.|||.+. .+++|++||..||+||++||.+++.|+...
T Consensus 13 R~~hn~~Er~RR~~in~~f~~Lr~lvP~~~~~k~sK~~iL~~Ai~YI~~L~~~~~~L~~e~ 73 (80)
T 1hlo_A 13 RAHHNALERKRRDHIKDSFHSLRDSVPSLQGEKASRAQILDKATEYIQYMRRKNHTHQQDI 73 (80)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSGGGTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhhHHHHHHHHHHHHHHHHHHHHCcCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 346999999999999999999999999863 239999999999999999999999998754
No 9
>3u5v_A Protein MAX, transcription factor E2-alpha chimer; basic helix-loop-helix (BHLH); 1.70A {Mus musculus} PDB: 2ql2_A*
Probab=99.40 E-value=1.8e-13 Score=105.06 Aligned_cols=59 Identities=24% Similarity=0.304 Sum_probs=50.5
Q ss_pred CCCccHHHHHHHHHHHHHHHHHhccCCC---CCCCCChhhHHHHHHHHHHHHHHHHHHHhcc
Q 023215 185 THPRSIAERVRRTRISDRIRKLQDLVPN---MDKQTNTADMLEEAVEYVKFLQKQIEILSYG 243 (285)
Q Consensus 185 ~~~HsiaERrRRerIneri~~Lq~LVP~---~~K~~DKAsIL~eAI~YIK~LQ~QVq~Le~~ 243 (285)
+..|+..||+||+.||+.|.+|+.+||. ..|.+.|+.||..||+||++||.++++++.-
T Consensus 6 R~~hN~~ER~Rr~~IN~~f~~Lr~~vP~~~~~~K~~sK~~IL~~AieYI~~Lq~~l~e~~~~ 67 (76)
T 3u5v_A 6 RAHHNALERKRRRDINEAFRELGRMCQMHLKSDKAQTKLLILQQAVQVILGLEQQVRERNLN 67 (76)
T ss_dssp ---CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_pred HhhchHHHhhhHHHHHHHHHHHHHHcCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 4579999999999999999999999995 3443479999999999999999999998763
No 10
>1nkp_A C-MYC, MYC proto-oncogene protein; transcription, DNA, BHLHZ, heterodimer, transcription/DNA complex; 1.80A {Homo sapiens} SCOP: a.38.1.1
Probab=99.39 E-value=3.5e-13 Score=105.51 Aligned_cols=58 Identities=21% Similarity=0.380 Sum_probs=52.5
Q ss_pred CCccHHHHHHHHHHHHHHHHHhccCCCCC--CCCChhhHHHHHHHHHHHHHHHHHHHhcc
Q 023215 186 HPRSIAERVRRTRISDRIRKLQDLVPNMD--KQTNTADMLEEAVEYVKFLQKQIEILSYG 243 (285)
Q Consensus 186 ~~HsiaERrRRerIneri~~Lq~LVP~~~--K~~DKAsIL~eAI~YIK~LQ~QVq~Le~~ 243 (285)
..|+..||+||+.||+.|..|+++||.+. .+++|++||.+||+||++|+.+.+.|...
T Consensus 8 ~~Hn~~ER~RR~~ln~~f~~Lr~~vP~~~~~~K~sK~~iL~~A~~YI~~L~~~~~~l~~~ 67 (88)
T 1nkp_A 8 RTHNVLERQRRNELKRSFFALRDQIPELENNEKAPKVVILKKATAYILSVQAEEQKLISE 67 (88)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCGGGTTCTTCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46999999999999999999999999863 34999999999999999999999887764
No 11
>1nlw_A MAD protein, MAX dimerizer; transcription factor, DNA, BHLHZ, transcription/DNA complex; 2.00A {Homo sapiens} SCOP: a.38.1.1
Probab=99.22 E-value=1.4e-11 Score=95.12 Aligned_cols=58 Identities=22% Similarity=0.212 Sum_probs=52.1
Q ss_pred CCccHHHHHHHHHHHHHHHHHhccCCCCC--CCCChhhHHHHHHHHHHHHHHHHHHHhcc
Q 023215 186 HPRSIAERVRRTRISDRIRKLQDLVPNMD--KQTNTADMLEEAVEYVKFLQKQIEILSYG 243 (285)
Q Consensus 186 ~~HsiaERrRRerIneri~~Lq~LVP~~~--K~~DKAsIL~eAI~YIK~LQ~QVq~Le~~ 243 (285)
..|+..||+||..||+.|..|+++||.+. .+++|+.||..||+||+.|+.+.+.|...
T Consensus 3 ~~HN~~ER~RR~~lk~~f~~Lr~~vP~~~~~~k~sk~~iL~kA~~yI~~L~~~~~~l~~e 62 (80)
T 1nlw_A 3 STHNEMEKNRRAHLRLSLEKLKGLVPLGPDSSRHTTLSLLTKAKLHIKKLEDSDRKAVHQ 62 (80)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSSCCCSSSCCCTTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35999999999999999999999999652 23789999999999999999999998874
No 12
>1mdy_A Protein (MYOD BHLH domain); protein-DNA complex, transcription/DNA complex; HET: DNA; 2.80A {Mus musculus} SCOP: a.38.1.1 PDB: 1mdy_B*
Probab=99.04 E-value=6e-11 Score=89.31 Aligned_cols=53 Identities=17% Similarity=0.380 Sum_probs=47.2
Q ss_pred CCCccHHHHHHHHHHHHHHHHHhccCCCC-CCCCChhhHHHHHHHHHHHHHHHH
Q 023215 185 THPRSIAERVRRTRISDRIRKLQDLVPNM-DKQTNTADMLEEAVEYVKFLQKQI 237 (285)
Q Consensus 185 ~~~HsiaERrRRerIneri~~Lq~LVP~~-~K~~DKAsIL~eAI~YIK~LQ~QV 237 (285)
+..|+..||+|+..||+.|..|+++||.. +++++|..+|..||+||.+||+.+
T Consensus 13 R~~aN~rER~R~~~iN~af~~LR~~iP~~~~~KlSKi~tLr~Ai~YI~~L~~~L 66 (68)
T 1mdy_A 13 RKAATMRERRRLSKVNEAFETLKRSTSSNPNQRLPKVEILRNAIRYIEGLQALL 66 (68)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTSCSCTTSCCCHHHHHHHHHHHHHHHHHTT
T ss_pred hhHhhHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 34589999999999999999999999964 345899999999999999999865
No 13
>4f3l_A Mclock, circadian locomoter output cycles protein kaput; BHLH, PAS, circadian rhythm proteins, transcription-activato; 2.27A {Mus musculus}
Probab=99.02 E-value=2.4e-10 Score=105.54 Aligned_cols=58 Identities=16% Similarity=0.389 Sum_probs=42.5
Q ss_pred cccCCCCCccHHHHHHHHHHHHHHHHHhccCCCCCCCCChhhHHHHHHHHHHHHHHHH
Q 023215 180 KRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQI 237 (285)
Q Consensus 180 Krg~a~~~HsiaERrRRerIneri~~Lq~LVP~~~K~~DKAsIL~eAI~YIK~LQ~QV 237 (285)
|...++.+|+++||+||++||+.|.+|+.|||....++||++||..||+|||.|+...
T Consensus 8 ~~~~~~~~~~~~e~~rr~~~n~~~~~l~~~~p~~~~~~dk~~il~~~~~~~~~~~~~~ 65 (361)
T 4f3l_A 8 KDKAKRVSRNKSEKKRRDQFNVLIKELGSMLPGNARKMDKSTVLQKSIDFLRKHKETT 65 (361)
T ss_dssp -----------CHHHHHHHHHHHHHHHHHTCCSSSCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred ccchhhhhhhHHHHHHHHHHHHHHHHHHHhCCCCCCCcCHHHHHHHHHHHHHHHHhhc
Confidence 3445567899999999999999999999999944444999999999999999998653
No 14
>2ql2_B Neurod1, neurogenic differentiation factor 1; basic-helix-loop-helix; HET: DNA; 2.50A {Mus musculus}
Probab=98.91 E-value=1.4e-09 Score=79.86 Aligned_cols=52 Identities=19% Similarity=0.309 Sum_probs=46.6
Q ss_pred CccHHHHHHHHHHHHHHHHHhccCCCC--CCCCChhhHHHHHHHHHHHHHHHHH
Q 023215 187 PRSIAERVRRTRISDRIRKLQDLVPNM--DKQTNTADMLEEAVEYVKFLQKQIE 238 (285)
Q Consensus 187 ~HsiaERrRRerIneri~~Lq~LVP~~--~K~~DKAsIL~eAI~YIK~LQ~QVq 238 (285)
.|+.-||+|+..||+.|..|+.+||.. ++++.|..+|..||+||++|++.++
T Consensus 5 ~~N~rER~R~~~iN~af~~LR~~lP~~~~~~klSKi~tLr~Ai~YI~~L~~~L~ 58 (60)
T 2ql2_B 5 KANARERNRMHGLNAALDNLRKVVPCYSKTQKLSKIETLRLAKNYIWALSEILR 58 (60)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTSSSCCSSSCCCHHHHHHHHHHHHHHHHHHTT
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHccCCCCcCcCCHHHHHHHHHHHHHHHHHHHh
Confidence 378889999999999999999999975 3468999999999999999998753
No 15
>4f3l_B BMAL1B; BHLH, PAS, circadian rhythm proteins, transcription-activato; 2.27A {Mus musculus}
Probab=98.89 E-value=4.6e-10 Score=105.19 Aligned_cols=56 Identities=29% Similarity=0.340 Sum_probs=48.4
Q ss_pred cccCCCCCccHHHHHHHHHHHHHHHHHhccCC----CCCCCCChhhHHHHHHHHHHHHHHH
Q 023215 180 KRGCATHPRSIAERVRRTRISDRIRKLQDLVP----NMDKQTNTADMLEEAVEYVKFLQKQ 236 (285)
Q Consensus 180 Krg~a~~~HsiaERrRRerIneri~~Lq~LVP----~~~K~~DKAsIL~eAI~YIK~LQ~Q 236 (285)
|.+.++.+|+.+||+||++||+.|.+|+.||| ...| +||++||..||.|||.|+..
T Consensus 9 ~~~~~~~~~~~~ek~rR~~~n~~~~~L~~l~p~~~~~~~k-~dk~~il~~~~~~l~~~~~~ 68 (387)
T 4f3l_B 9 RIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRK-LDKLTVLRMAVQHMKTLRGA 68 (387)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCSSC-CCHHHHHHHHHHHHHHHHCC
T ss_pred hhhhhcccccchhhcchHHHHHHHHHHHHhcCCCCccccc-cCHHHHHHHHHHHHHHhhcc
Confidence 34555678999999999999999999999999 4555 99999999999999999843
No 16
>4ath_A MITF, microphthalmia-associated transcription factor; DNA binding protein, melanoma; HET: MSE; 1.95A {Mus musculus}
Probab=98.81 E-value=4.9e-09 Score=82.11 Aligned_cols=49 Identities=29% Similarity=0.483 Sum_probs=43.0
Q ss_pred HHHHHHHHHHHHhccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHhcc
Q 023215 195 RRTRISDRIRKLQDLVPNMDK---QTNTADMLEEAVEYVKFLQKQIEILSYG 243 (285)
Q Consensus 195 RRerIneri~~Lq~LVP~~~K---~~DKAsIL~eAI~YIK~LQ~QVq~Le~~ 243 (285)
-|..||++|++|..|||.+.. +++|++||..||+||++||++++.+...
T Consensus 3 ~R~nIN~~I~EL~~LiP~~~~~~~k~nKg~IL~ksvdYI~~Lq~e~~r~~e~ 54 (83)
T 4ath_A 3 MRFNINDRIKELGTLIPKSNDPDMRWNKGTILKASVDYIRKLQREQQRAKDL 54 (83)
T ss_dssp CHHHHHHHHHHHHHHSCCCCCTTCCCSHHHHHHHHHHHHHHHHHTHHHHHHH
T ss_pred chhhHHHhhhhhhccCCCCCCcccCcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 389999999999999997532 3899999999999999999988877753
No 17
>2lfh_A DNA-binding protein inhibitor ID-3; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=98.43 E-value=8.3e-08 Score=72.70 Aligned_cols=46 Identities=20% Similarity=0.339 Sum_probs=41.1
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCC--CCCCChhhHHHHHHHHHHHHHH
Q 023215 190 IAERVRRTRISDRIRKLQDLVPNM--DKQTNTADMLEEAVEYVKFLQK 235 (285)
Q Consensus 190 iaERrRRerIneri~~Lq~LVP~~--~K~~DKAsIL~eAI~YIK~LQ~ 235 (285)
.-||+|...||+-|..||.+||.. ++++.|..+|..||+||..||.
T Consensus 20 erER~Rm~~lN~aF~~LR~~VP~~p~~kKLSKiEtLr~Ai~YI~~Lq~ 67 (68)
T 2lfh_A 20 EEPLSLLDDMNHCYSRLRELVPGVPRGTQLSQVEILQRVIDYILDLQV 67 (68)
T ss_dssp CCCSCSSSHHHHHHHHHHHHCCCCCTTCCCCHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCCCccHHHHHHHHHHHHHHHHc
Confidence 348899999999999999999965 4468999999999999999984
No 18
>4aya_A DNA-binding protein inhibitor ID-2; cell cycle; 2.10A {Homo sapiens}
Probab=97.90 E-value=2.2e-05 Score=63.07 Aligned_cols=51 Identities=22% Similarity=0.369 Sum_probs=44.1
Q ss_pred HHHHHHHHHHHHHHHhccCCCC--CCCCChhhHHHHHHHHHHHHHHHHHHHhc
Q 023215 192 ERVRRTRISDRIRKLQDLVPNM--DKQTNTADMLEEAVEYVKFLQKQIEILSY 242 (285)
Q Consensus 192 ERrRRerIneri~~Lq~LVP~~--~K~~DKAsIL~eAI~YIK~LQ~QVq~Le~ 242 (285)
||.|=..||+-|..||.+||.. ++++.|..+|.-||+||++|+..++.-..
T Consensus 33 ~r~Rm~~lN~AF~~LR~~vP~~p~~kKLSKIETLRlAi~YI~~Lq~~L~~~~~ 85 (97)
T 4aya_A 33 PMSLLYNMNDCYSKLKELVPSIPQNKKVSKMEILQHVIDYILDLQIALDSHLK 85 (97)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTSCSSSCCCHHHHHHHHHHHHHHHHHHHHTTTS
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCcccHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 5778889999999999999965 45689999999999999999998766443
No 19
>3muj_A Transcription factor COE3; immunoglobulin like fold, helix-loop-helix, structural genom consortium, SGC, DNA binding protein; 1.92A {Homo sapiens} PDB: 3mqi_A
Probab=44.31 E-value=28 Score=29.34 Aligned_cols=37 Identities=22% Similarity=0.374 Sum_probs=30.2
Q ss_pred HHHHHHHHHHhccCCCCC---CCCChhhHHHHHHHHHHHH
Q 023215 197 TRISDRIRKLQDLVPNMD---KQTNTADMLEEAVEYVKFL 233 (285)
Q Consensus 197 erIneri~~Lq~LVP~~~---K~~DKAsIL~eAI~YIK~L 233 (285)
=-|.-.|+.|+++||... .++-|..||..|.++++.|
T Consensus 94 PtId~gfqrl~k~~pr~pgdpe~lpk~~~lkraa~l~e~~ 133 (138)
T 3muj_A 94 PTIDYGFQRLQKVIPRHPGDPERLPKEVLLKRAADLVEAL 133 (138)
T ss_dssp CCHHHHHHHHHHHSCCCTTCCSSCCHHHHHHHHHHHHHHH
T ss_pred CccccchhhhccccCCCCCChhhhhHHHHHHHHHHHHHHH
Confidence 347889999999999532 2477999999999998876
No 20
>1p3q_Q VPS9P, vacuolar protein sorting-associated protein VPS9; trafficking, post translational modification, mono- ubiquitination; 1.70A {Saccharomyces cerevisiae} SCOP: a.5.2.4 PDB: 1mn3_A
Probab=40.45 E-value=31 Score=24.67 Aligned_cols=26 Identities=23% Similarity=0.592 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCCCC
Q 023215 190 IAERVRRTRISDRIRKLQDLVPNMDK 215 (285)
Q Consensus 190 iaERrRRerIneri~~Lq~LVP~~~K 215 (285)
.++|.+|..-++-++.|+.+.|+.++
T Consensus 3 ~a~~i~~~e~~~~~~~L~~MFP~lD~ 28 (54)
T 1p3q_Q 3 LIKKIEENERKDTLNTLQNMFPDMDP 28 (54)
T ss_dssp THHHHHHHHHHHHHHHHHHHSTTSCH
T ss_pred HHHHHHHHHHHHHHHHHHHHcccCCH
Confidence 46888888999999999999998766
No 21
>3p8c_D Wiskott-aldrich syndrome protein family member 1; actin polymerization, protein binding; 2.29A {Homo sapiens}
Probab=39.41 E-value=6.2 Score=36.59 Aligned_cols=19 Identities=26% Similarity=0.216 Sum_probs=0.0
Q ss_pred CCCCCCCcccccccCChHH
Q 023215 22 RGELSRGGLARLRSAPASW 40 (285)
Q Consensus 22 ~~~~~~~~l~r~~s~pa~~ 40 (285)
||.+..+|+.+..|+|.-.
T Consensus 196 ~~~~~~~~~~~~~~~~p~~ 214 (279)
T 3p8c_D 196 GGSGGSGGSKRHPSTLPVI 214 (279)
T ss_dssp -------------------
T ss_pred CCCCCCCccccCCCCCCCc
Confidence 3444456899988887654
No 22
>3ntt_A Capsid protein; gene therapy vector, cystic fibros sialic acid receptor, icosahedral virus; 3.45A {Adeno-associated virus - 5}
Probab=35.84 E-value=11 Score=39.20 Aligned_cols=12 Identities=25% Similarity=0.728 Sum_probs=5.7
Q ss_pred CChHHHHHHhhhh
Q 023215 36 APASWIDALLEEE 48 (285)
Q Consensus 36 ~pa~~l~~~~~~~ 48 (285)
+|-.|= .|+++-
T Consensus 283 SP~DwQ-~Lin~y 294 (724)
T 3ntt_A 283 SPRDWQ-RLINNY 294 (724)
T ss_dssp CHHHHH-HHHHHE
T ss_pred CHHHHH-HHHHhh
Confidence 455663 344443
No 23
>1f1f_A Cytochrome C6; heme, protein structure, cyanobacteria, photosynthesis, electron transport; HET: HEM; 2.70A {Arthrospira maxima} SCOP: a.3.1.1 PDB: 1kib_A*
Probab=30.44 E-value=1e+02 Score=21.13 Aligned_cols=40 Identities=10% Similarity=0.261 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHhccCCCCCCCCChhhHHHHHHHHHHHHHHH
Q 023215 196 RTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQ 236 (285)
Q Consensus 196 RerIneri~~Lq~LVP~~~K~~DKAsIL~eAI~YIK~LQ~Q 236 (285)
++.|.+.|..-...+|.....++... +.+.|.||+.|..+
T Consensus 48 ~~~l~~~i~~g~~~Mp~~~~~ls~~e-i~~l~~yl~~~~~~ 87 (89)
T 1f1f_A 48 VAAVAYQVTNGKNAMPGFNGRLSPLQ-IEDVAAYVVDQAEK 87 (89)
T ss_dssp HHHHHHHHHHCBTTBCCCTTTSCHHH-HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCCCccccCCCHHH-HHHHHHHHHHHhhc
Confidence 44555555555678887765455544 57899999998754
No 24
>2ke4_A CDC42-interacting protein 4; CIP4, TC10, coiled-coil, alternative splicing, cell membrane, coiled coil, cytoplasm, cytoskeleton, endocytosis; NMR {Homo sapiens}
Probab=27.20 E-value=77 Score=24.79 Aligned_cols=57 Identities=12% Similarity=0.208 Sum_probs=37.6
Q ss_pred ccHHHHHHHHHHHHHHHHHhccC--------------------CCCCCCCChhhHHHHHHHHHHHHHHHHHHHhcccC
Q 023215 188 RSIAERVRRTRISDRIRKLQDLV--------------------PNMDKQTNTADMLEEAVEYVKFLQKQIEILSYGRN 245 (285)
Q Consensus 188 HsiaERrRRerIneri~~Lq~LV--------------------P~~~K~~DKAsIL~eAI~YIK~LQ~QVq~Le~~~~ 245 (285)
|-.-| +||.+|..+|..|+.=| |..+....-..-|.++..-|..|+..+.+++.-..
T Consensus 10 ~LPpe-qRkkkL~~Ki~el~~ei~ke~~~regl~Km~~vY~~nP~~GD~~s~~~~L~e~~~kid~L~~el~K~q~~L~ 86 (98)
T 2ke4_A 10 HLPPE-QQRKRLQQQLEERSRELQKEVDQREALKKMKDVYEKTPQMGDPASLEPQIAETLSNIERLKLEVQKYEAWLA 86 (98)
T ss_dssp SSCHH-HHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHCGGGCCGGGSHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344 34556666666655433 45544345577888999999999999998887544
No 25
>2wt7_A Proto-oncogene protein C-FOS; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 1fos_E* 1a02_F* 1s9k_D
Probab=24.61 E-value=1e+02 Score=21.83 Aligned_cols=16 Identities=25% Similarity=0.200 Sum_probs=7.8
Q ss_pred HHHHHHHHHHHHHHhc
Q 023215 227 VEYVKFLQKQIEILSY 242 (285)
Q Consensus 227 I~YIK~LQ~QVq~Le~ 242 (285)
.+||..|+.+|..|+.
T Consensus 22 k~~~~~Le~~v~~L~~ 37 (63)
T 2wt7_A 22 RELTDTLQAETDQLED 37 (63)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 3444555555555544
No 26
>3ph2_B Cytochrome C6; photosynthesis, cytochrome F, photosys thylakoid; HET: HEM; 1.40A {Phormidium laminosum} SCOP: a.3.1.1 PDB: 2v08_A* 1c6s_A*
Probab=24.04 E-value=1.6e+02 Score=19.88 Aligned_cols=39 Identities=10% Similarity=0.162 Sum_probs=25.6
Q ss_pred HHHHHHHHHHhccCCCCCCCCChhhHHHHHHHHHHHHHHH
Q 023215 197 TRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQ 236 (285)
Q Consensus 197 erIneri~~Lq~LVP~~~K~~DKAsIL~eAI~YIK~LQ~Q 236 (285)
+.|...|+.-+..+|.....++... +.+.+.||+.|..+
T Consensus 46 ~~~~~~i~~g~~~Mp~~~~~ls~~e-i~~l~~yl~~~~~~ 84 (86)
T 3ph2_B 46 VAITTVVTNGKAGMPAFKGRLTDDQ-IAAVAAYVLDQAEK 84 (86)
T ss_dssp HHHHHHHHHCBTTBCCCTTTSCHHH-HHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCCcccCCCHHH-HHHHHHHHHHhhhc
Confidence 3444555555568888754455555 57889999998653
No 27
>1m2x_A Class B carbapenemase BLAB-1; alpha-beta/BETA-alpha fold., hydrolase; HET: MCO; 1.50A {Elizabethkingia meningoseptica} SCOP: d.157.1.1
Probab=23.90 E-value=40 Score=27.66 Aligned_cols=32 Identities=13% Similarity=0.204 Sum_probs=23.3
Q ss_pred hccCCCCCCCCChhhHHHHHHHHHHHHHHHHHH
Q 023215 207 QDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEI 239 (285)
Q Consensus 207 q~LVP~~~K~~DKAsIL~eAI~YIK~LQ~QVq~ 239 (285)
..++|+=.... ....|.++++|++.++++|++
T Consensus 190 ~~i~pgHg~~~-~~~~l~~~~~~l~~~~~~~~~ 221 (223)
T 1m2x_A 190 QYVVAGHDDWK-DQRSIQHTLDLINEYQQKQKA 221 (223)
T ss_dssp SEEEESBSCCC-STTHHHHHHHHHHHHHHTC--
T ss_pred CEEEeCCCCcC-CHHHHHHHHHHHHHHHHHHhc
Confidence 35677655544 467899999999999998854
No 28
>1cyi_A Cytochrome C6, cytochrome C553; photosynthesis, electron transport protein (cytochrome); HET: HEM; 1.90A {Chlamydomonas reinhardtii} SCOP: a.3.1.1 PDB: 1cyj_A*
Probab=23.43 E-value=1.6e+02 Score=20.23 Aligned_cols=39 Identities=13% Similarity=0.189 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHhccCCCCCCCCChhhHHHHHHHHHHHHHH
Q 023215 196 RTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235 (285)
Q Consensus 196 RerIneri~~Lq~LVP~~~K~~DKAsIL~eAI~YIK~LQ~ 235 (285)
.+.|.+.|+.-...+|.....++... +.+.|.||+.|..
T Consensus 46 ~~~l~~~i~~g~~~Mp~~~~~ls~~e-i~~l~~yl~~~~~ 84 (90)
T 1cyi_A 46 VESIIYQVENGKGAMPAWADRLSEEE-IQAVAEYVFKQAT 84 (90)
T ss_dssp HHHHHHHHHHCBTTBCCCTTTSCHHH-HHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCCCcccccCCHHH-HHHHHHHHHhccc
Confidence 34455555555578887764455554 6789999999876
No 29
>1gdv_A Cytochrome C6; RED ALGA, electron transport; HET: HEM; 1.57A {Porphyra yezoensis} SCOP: a.3.1.1 PDB: 2zbo_A*
Probab=22.63 E-value=1.8e+02 Score=19.58 Aligned_cols=37 Identities=19% Similarity=0.343 Sum_probs=23.8
Q ss_pred HHHHHHHHHhccCCCCCCCCChhhHHHHHHHHHHHHHH
Q 023215 198 RISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235 (285)
Q Consensus 198 rIneri~~Lq~LVP~~~K~~DKAsIL~eAI~YIK~LQ~ 235 (285)
.|.+.|+.-...+|.....++... +.+.+.||+.|..
T Consensus 46 ~l~~~i~~g~~~Mp~~~~~ls~~e-i~~l~~yl~~~~~ 82 (85)
T 1gdv_A 46 AITYQVQNGKNAMPAFGGRLVDED-IEDAANYVLSQSE 82 (85)
T ss_dssp HHHHHHHHCBTTBCCCTTTSCHHH-HHHHHHHHHHHHH
T ss_pred HHHHHHHhCcCCCCCCCCCCCHHH-HHHHHHHHHHHhh
Confidence 344444443467887764355554 5789999999875
No 30
>1c6r_A Cytochrome C6; electron transport protein, reduced state, photosynthesis; HET: HEM; 1.90A {Scenedesmus obliquus} SCOP: a.3.1.1 PDB: 1c6o_A* 1a2s_A* 1ced_A* 1ctj_A*
Probab=21.14 E-value=1.8e+02 Score=19.87 Aligned_cols=39 Identities=10% Similarity=0.157 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHhccCCCCCCCCChhhHHHHHHHHHHHHHH
Q 023215 196 RTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235 (285)
Q Consensus 196 RerIneri~~Lq~LVP~~~K~~DKAsIL~eAI~YIK~LQ~ 235 (285)
.+.|.+.|+.-...+|.....++... +.+.|.||+.|..
T Consensus 47 ~~~l~~~i~~g~~~Mp~~~~~ls~~e-i~~l~~yl~~~~~ 85 (89)
T 1c6r_A 47 LEAITYQVENGKGAMPAWSGTLDDDE-IAAVAAYVYDQAS 85 (89)
T ss_dssp HHHHHHHHHHCBTTBCCCTTTSCHHH-HHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCCCCCCCcCCHHH-HHHHHHHHHHHcc
Confidence 34455555555577888765455555 5789999999875
No 31
>1a7t_A Metallo-beta-lactamase; hydrolase (beta-lactamase), zinc; HET: MES; 1.85A {Bacteroides fragilis} SCOP: d.157.1.1 PDB: 1a8t_A* 2bmi_A 1kr3_A 1znb_A 2znb_A 3znb_A 4znb_A 1hlk_A*
Probab=20.03 E-value=66 Score=26.51 Aligned_cols=32 Identities=13% Similarity=0.215 Sum_probs=23.6
Q ss_pred hccCCCCCCCCChhhHHHHHHHHHHHHHHHHHH
Q 023215 207 QDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEI 239 (285)
Q Consensus 207 q~LVP~~~K~~DKAsIL~eAI~YIK~LQ~QVq~ 239 (285)
..++|+=....+ ..+++.+++||+.+.+++.+
T Consensus 200 ~~v~pgHg~~~~-~~~~~~~~~~l~~~~~~~~~ 231 (232)
T 1a7t_A 200 RYVVPGHGNYGG-TELIEHTKQIVNQYIESTSK 231 (232)
T ss_dssp SEEEESSSCCBC-THHHHHHHHHHHHHHHHHC-
T ss_pred CEEECCCCCccc-HHHHHHHHHHHHHHHHHhcC
Confidence 457776665344 57899999999999988753
Done!