Query 023217
Match_columns 285
No_of_seqs 270 out of 1811
Neff 6.5
Searched_HMMs 46136
Date Fri Mar 29 02:23:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023217.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/023217hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0713 Molecular chaperone (D 100.0 8.2E-48 1.8E-52 355.5 5.0 239 8-284 8-249 (336)
2 COG0484 DnaJ DnaJ-class molecu 100.0 3.4E-41 7.3E-46 318.3 15.8 197 13-223 1-222 (371)
3 PRK14288 chaperone protein Dna 100.0 2.3E-34 5E-39 275.3 15.0 191 15-221 2-215 (369)
4 PRK14296 chaperone protein Dna 100.0 6.2E-34 1.3E-38 272.6 15.4 193 15-221 3-229 (372)
5 PRK14286 chaperone protein Dna 100.0 2.2E-33 4.9E-38 268.7 15.8 186 15-215 3-218 (372)
6 KOG0712 Molecular chaperone (D 100.0 1.2E-33 2.7E-38 263.8 11.1 176 14-211 2-197 (337)
7 PRK14285 chaperone protein Dna 100.0 6.3E-33 1.4E-37 265.0 15.3 191 16-221 3-222 (365)
8 PRK14298 chaperone protein Dna 100.0 8.6E-33 1.9E-37 265.1 15.3 195 15-222 4-222 (377)
9 PTZ00037 DnaJ_C chaperone prot 100.0 9.4E-33 2E-37 267.7 15.3 182 9-215 21-223 (421)
10 PRK14294 chaperone protein Dna 100.0 1.5E-32 3.2E-37 262.6 15.6 187 14-215 2-212 (366)
11 PRK14276 chaperone protein Dna 100.0 1.6E-32 3.5E-37 263.5 15.7 187 15-215 3-218 (380)
12 PRK14279 chaperone protein Dna 100.0 1.4E-32 3.1E-37 264.8 15.3 192 15-221 8-249 (392)
13 PRK14301 chaperone protein Dna 100.0 3.4E-32 7.3E-37 260.7 17.1 192 15-221 3-220 (373)
14 PRK14297 chaperone protein Dna 100.0 3.3E-32 7E-37 261.4 16.8 192 15-219 3-224 (380)
15 PRK14282 chaperone protein Dna 100.0 2.3E-32 5E-37 261.5 15.6 194 15-221 3-232 (369)
16 PRK14287 chaperone protein Dna 100.0 2.7E-32 5.8E-37 261.2 15.8 184 15-214 3-209 (371)
17 PRK14277 chaperone protein Dna 100.0 4.5E-32 9.8E-37 260.9 16.2 187 15-215 4-227 (386)
18 PRK10767 chaperone protein Dna 100.0 7.2E-32 1.6E-36 258.2 16.0 190 15-219 3-214 (371)
19 PRK14290 chaperone protein Dna 100.0 1.1E-31 2.4E-36 256.5 16.7 189 16-216 3-221 (365)
20 PRK14278 chaperone protein Dna 100.0 1.2E-31 2.7E-36 257.2 16.8 191 16-221 3-219 (378)
21 PRK14280 chaperone protein Dna 100.0 8.9E-32 1.9E-36 258.1 15.3 186 15-215 3-215 (376)
22 PRK14295 chaperone protein Dna 100.0 1.9E-31 4.1E-36 256.8 15.1 186 15-215 8-234 (389)
23 TIGR02349 DnaJ_bact chaperone 100.0 3.7E-31 8.1E-36 251.8 15.4 185 17-215 1-215 (354)
24 PRK14284 chaperone protein Dna 100.0 2.3E-31 5E-36 256.4 14.0 191 16-221 1-234 (391)
25 PRK14281 chaperone protein Dna 100.0 7.7E-31 1.7E-35 253.2 16.1 192 16-221 3-242 (397)
26 PRK14291 chaperone protein Dna 100.0 1E-30 2.3E-35 251.1 15.7 191 15-221 2-231 (382)
27 PRK14283 chaperone protein Dna 100.0 1.4E-30 3.1E-35 249.9 14.5 192 14-219 3-222 (378)
28 PRK14300 chaperone protein Dna 100.0 1.8E-29 4E-34 241.8 15.0 190 16-221 3-221 (372)
29 PRK14289 chaperone protein Dna 100.0 2.6E-29 5.6E-34 241.8 15.5 194 15-221 4-234 (386)
30 PRK14293 chaperone protein Dna 100.0 5E-29 1.1E-33 238.9 15.7 183 16-214 3-214 (374)
31 PRK14292 chaperone protein Dna 100.0 4.5E-28 9.7E-33 232.1 16.2 181 16-212 2-209 (371)
32 PRK14299 chaperone protein Dna 99.9 4.8E-24 1E-28 198.2 11.4 123 15-139 3-152 (291)
33 PRK10266 curved DNA-binding pr 99.9 8.3E-22 1.8E-26 184.4 8.3 121 16-138 4-139 (306)
34 KOG0715 Molecular chaperone (D 99.8 1.6E-21 3.5E-26 180.9 7.6 171 15-211 42-228 (288)
35 KOG0717 Molecular chaperone (D 99.8 6.6E-22 1.4E-26 189.0 2.7 76 13-88 5-81 (508)
36 KOG0716 Molecular chaperone (D 99.8 8.9E-21 1.9E-25 171.2 4.2 75 13-87 28-102 (279)
37 PTZ00341 Ring-infected erythro 99.8 1.4E-19 3E-24 186.0 6.9 78 10-88 567-644 (1136)
38 KOG0691 Molecular chaperone (D 99.8 1.1E-19 2.4E-24 168.3 4.4 73 15-87 4-76 (296)
39 KOG0718 Molecular chaperone (D 99.8 1.7E-19 3.6E-24 172.8 3.9 79 12-90 5-86 (546)
40 KOG0719 Molecular chaperone (D 99.7 1.6E-18 3.5E-23 153.5 5.6 108 15-135 13-122 (264)
41 PF00226 DnaJ: DnaJ domain; I 99.7 8.8E-19 1.9E-23 126.9 2.2 63 17-79 1-64 (64)
42 PHA03102 Small T antigen; Revi 99.7 2.7E-17 5.9E-22 139.2 4.5 85 15-113 4-90 (153)
43 smart00271 DnaJ DnaJ molecular 99.7 1E-16 2.2E-21 114.2 5.2 59 16-74 1-60 (60)
44 TIGR03835 termin_org_DnaJ term 99.6 1.1E-16 2.5E-21 161.6 6.3 89 16-113 2-90 (871)
45 COG2214 CbpA DnaJ-class molecu 99.6 1.6E-16 3.6E-21 137.6 4.5 69 14-82 4-73 (237)
46 cd06257 DnaJ DnaJ domain or J- 99.6 4E-16 8.7E-21 109.1 5.1 55 17-71 1-55 (55)
47 KOG0721 Molecular chaperone (D 99.6 6.1E-16 1.3E-20 136.0 4.0 75 12-86 95-169 (230)
48 KOG0624 dsRNA-activated protei 99.6 9.7E-16 2.1E-20 143.3 3.1 74 13-87 391-467 (504)
49 KOG0550 Molecular chaperone (D 99.5 1.2E-14 2.6E-19 138.4 3.7 70 12-81 369-439 (486)
50 KOG0714 Molecular chaperone (D 99.5 4.2E-14 9.1E-19 128.3 7.0 74 15-88 2-76 (306)
51 PRK05014 hscB co-chaperone Hsc 99.5 4.3E-14 9.3E-19 122.2 4.5 65 16-80 1-72 (171)
52 PRK01356 hscB co-chaperone Hsc 99.4 7E-14 1.5E-18 120.3 3.9 66 16-81 2-72 (166)
53 KOG0722 Molecular chaperone (D 99.4 5.7E-14 1.2E-18 126.2 2.9 69 13-82 30-98 (329)
54 PRK00294 hscB co-chaperone Hsc 99.4 1.4E-13 3E-18 119.2 4.8 67 14-80 2-75 (173)
55 PRK03578 hscB co-chaperone Hsc 99.4 1.7E-13 3.6E-18 119.0 4.6 69 16-84 6-83 (176)
56 KOG0720 Molecular chaperone (D 99.4 1.1E-13 2.5E-18 132.9 3.0 67 15-82 234-300 (490)
57 PTZ00100 DnaJ chaperone protei 99.3 7.2E-13 1.6E-17 107.1 4.5 57 10-70 59-115 (116)
58 PRK09430 djlA Dna-J like membr 99.3 1.7E-12 3.7E-17 119.6 4.1 59 13-71 197-262 (267)
59 PHA02624 large T antigen; Prov 99.2 8.1E-12 1.7E-16 125.3 3.6 60 15-78 10-71 (647)
60 COG5407 SEC63 Preprotein trans 99.1 3.2E-11 6.9E-16 115.9 2.4 72 16-87 98-174 (610)
61 PRK01773 hscB co-chaperone Hsc 99.0 4.7E-10 1E-14 97.2 4.3 65 16-80 2-73 (173)
62 KOG1150 Predicted molecular ch 98.9 5.8E-10 1.3E-14 97.4 3.6 65 13-77 50-115 (250)
63 TIGR00714 hscB Fe-S protein as 98.9 1.2E-09 2.7E-14 93.2 4.0 54 28-81 3-61 (157)
64 COG5269 ZUO1 Ribosome-associat 98.8 1E-09 2.2E-14 99.9 1.9 75 10-84 37-116 (379)
65 KOG1789 Endocytosis protein RM 98.2 7.4E-07 1.6E-11 93.3 4.0 58 10-70 1275-1336(2235)
66 KOG0723 Molecular chaperone (D 98.1 1.8E-06 3.8E-11 68.5 3.1 57 12-72 52-108 (112)
67 KOG0568 Molecular chaperone (D 98.1 2.3E-06 5E-11 76.7 2.9 56 16-72 47-103 (342)
68 PF00684 DnaJ_CXXCXGXG: DnaJ c 96.8 0.002 4.3E-08 47.0 4.2 59 140-209 3-65 (66)
69 KOG3192 Mitochondrial J-type c 96.6 0.00088 1.9E-08 56.8 1.3 67 14-80 6-79 (168)
70 COG1076 DjlA DnaJ-domain-conta 96.5 0.001 2.2E-08 57.6 1.1 54 16-69 113-173 (174)
71 KOG0431 Auxilin-like protein a 95.5 0.011 2.4E-07 58.7 3.4 44 26-69 398-448 (453)
72 COG1076 DjlA DnaJ-domain-conta 95.3 0.0059 1.3E-07 52.8 0.7 66 17-82 2-74 (174)
73 PF03656 Pam16: Pam16; InterP 93.4 0.082 1.8E-06 43.7 3.3 54 13-70 55-108 (127)
74 PLN03165 chaperone protein dna 92.3 0.25 5.4E-06 39.9 4.6 54 140-213 46-99 (111)
75 KOG0724 Zuotin and related mol 80.1 1.1 2.3E-05 42.4 2.0 56 27-82 3-62 (335)
76 PF13446 RPT: A repeated domai 79.2 3.1 6.8E-05 29.5 3.7 27 16-42 5-31 (62)
77 PF11833 DUF3353: Protein of u 75.3 3.7 8E-05 36.3 3.8 38 25-70 1-38 (194)
78 TIGR02642 phage_xxxx uncharact 66.2 6.5 0.00014 34.6 3.3 35 193-227 105-142 (186)
79 PF14687 DUF4460: Domain of un 59.8 12 0.00026 30.2 3.5 48 26-73 4-55 (112)
80 PF14453 ThiS-like: ThiS-like 56.3 9 0.0002 27.3 2.0 22 245-266 33-54 (57)
81 COG5552 Uncharacterized conser 38.8 83 0.0018 23.7 4.8 34 15-48 2-35 (88)
82 KOG3442 Uncharacterized conser 36.7 42 0.00092 27.7 3.3 39 13-51 56-94 (132)
83 COG4033 Uncharacterized protei 36.4 29 0.00063 27.3 2.2 21 257-277 41-67 (102)
84 PF09866 DUF2093: Uncharacteri 35.1 24 0.00051 23.6 1.3 11 257-267 2-12 (42)
85 PF14347 DUF4399: Domain of un 32.1 41 0.0009 25.8 2.4 24 247-270 49-73 (87)
86 PF12434 Malate_DH: Malate deh 31.4 53 0.0012 19.9 2.2 17 30-46 10-26 (28)
87 PRK15216 putative fimbrial bio 30.3 49 0.0011 31.5 3.0 31 249-279 58-90 (340)
88 PF07709 SRR: Seven Residue Re 29.0 19 0.0004 18.2 0.0 13 58-70 2-14 (14)
89 PF12707 DUF3804: Protein of u 28.8 54 0.0012 26.9 2.6 26 253-279 58-83 (128)
90 PF10041 DUF2277: Uncharacteri 26.5 2.4E+02 0.0051 21.4 5.5 56 15-70 2-60 (78)
91 COG1062 AdhC Zn-dependent alco 23.6 41 0.00089 32.6 1.2 24 253-276 73-96 (366)
92 PF07739 TipAS: TipAS antibiot 23.6 68 0.0015 24.8 2.4 51 23-82 51-103 (118)
93 PF08308 PEGA: PEGA domain; I 23.5 1.6E+02 0.0034 20.8 4.1 32 250-281 25-56 (71)
94 KOG1690 emp24/gp25L/p24 family 23.0 53 0.0012 29.3 1.8 25 253-277 93-120 (215)
95 COG1107 Archaea-specific RecJ- 22.0 53 0.0011 34.0 1.7 7 222-228 108-114 (715)
96 PRK00810 nifW nitrogenase stab 20.5 1.2E+02 0.0026 24.6 3.2 12 16-27 19-30 (113)
97 KOG2589 Histone tail methylase 20.1 63 0.0014 31.6 1.7 18 254-271 223-240 (453)
No 1
>KOG0713 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=8.2e-48 Score=355.52 Aligned_cols=239 Identities=41% Similarity=0.581 Sum_probs=199.2
Q ss_pred CCCCCCCCCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHhhhhhccccCCccccccccccCccccc
Q 023217 8 GSSAPTIRRDPYEVLCVSRDSSDQEIKTAYRKLALKYHPDKNVSNPEAAELFKEVAYSYSILSDPEKRRHYDNAGFEAID 87 (285)
Q Consensus 8 ~~~~~~~~~d~Y~iLgv~~~as~~eIk~ayrklal~~HPDk~~~~~~a~~~f~~i~~AY~vLsdp~~R~~YD~~G~~~~~ 87 (285)
........+|||+||||+++|++.|||+|||||||++||||||+||.|.++|++|+.||+|||||++|+.||.+|+++++
T Consensus 8 ~~~~v~~~rDfYelLgV~k~Asd~eIKkAYRKLALk~HPDkNpddp~A~e~F~~in~AYEVLsDpekRk~YD~~GEegL~ 87 (336)
T KOG0713|consen 8 GAEAVLAGRDFYELLGVPKNASDQEIKKAYRKLALKYHPDKNPDDPNANEKFKEINAAYEVLSDPEKRKHYDTYGEEGLK 87 (336)
T ss_pred hhhhhhcCCCHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHhhhHhhhc
Confidence 34445567999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred cCCccccccccccccHHHHHHHhhccCCCCceeeechhhHHHHhCCceeEeecCCCCccccccccccccccceeEEEEEc
Q 023217 88 AEGMDMEIDLSNLGTVNTMFAALFSKLGVPIKTTISANVLEEALNGTVTVRPLPIGTSVSGKVEKQCAHFFGVTINDQQA 167 (285)
Q Consensus 88 ~~~~~~~~d~~~~g~~~~~F~~~F~~~G~~i~~~i~~~~Lee~y~G~~~~~~l~~G~~~~~k~~k~c~~c~G~~i~~~q~ 167 (285)
..+.....+.++ +++|+.+|+.+|+. +....+++. ++.|..+...++++|+|||...++++.+
T Consensus 88 ~~~~~~~~g~~~----~~~f~~~f~dfg~~----~~g~~~~e~---------~~~g~~V~~~~e~~~~h~y~~~~~e~~r 150 (336)
T KOG0713|consen 88 DENKDGEGGGGG----NDIFSAFFGDFGVT----VGGNPLEEA---------LPKGSDVSSDLEKQLEHFYMGNFVEEVR 150 (336)
T ss_pred ccccccccCCcc----cchHHHhhcccccc----cCCCcccCC---------CCCCceEEeehhhchhhhhcccHHHHHh
Confidence 544222222211 68999999999862 333334433 6677777788889999999999999999
Q ss_pred cceeEEEEEecCcccchhcccccccCcceeeeecc--ccccCCceecccceEeeeeeeecccccchhhhcCCcchHHHhh
Q 023217 168 EAGIVVRVTSTAQSKFKLLYFEQDTNGGYGLALQE--DSEKTGKVTSAGMYFLHFQVYRMDSTLNAIAIAKDPESAFFKR 245 (285)
Q Consensus 168 ~~G~v~q~qs~~~~kfk~~~f~~~~cgG~g~~~q~--~s~c~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~ 245 (285)
..|++.++.++...+|++++|++..++|+..++|+ |..|++ ..++...++.+.+|++
T Consensus 151 ~~~v~~~~~g~~~~~~~~~~~~~~~~~g~~~~~q~~~~~~~~~---------------------~k~~~e~~~~~~~~~~ 209 (336)
T KOG0713|consen 151 EKGVYKPAPGTRKCNCRLEMFTQQEGPGRFQMLQEAVCDECPN---------------------VKLVLEEDPLEVEFER 209 (336)
T ss_pred ccCceeecCcccccCChhhheeeccCCChhhhhhhhhhccCCc---------------------cceeecCCceeeeeee
Confidence 99999999999999999999999999898877665 555544 2233346778889999
Q ss_pred cCCCCcceeeeecCCceEEEEEcCcc-ceEEEEEEeeccC
Q 023217 246 LEGLQPCEVSELKAGTHIFAVYGLNC-KFYIFTFESYNRN 284 (285)
Q Consensus 246 l~~~~~~~~~~~~~g~h~~~vy~~n~-~~~~~~~~~~~~~ 284 (285)
++.++++.+..++.+.|++||||||| .-..|+.+..-|+
T Consensus 210 ~~~~~~~~~~~~~~~~h~~~~~gD~~f~~~~y~~~~~~~k 249 (336)
T KOG0713|consen 210 GDADGPEEIFELEGEPHIDGVPGDLFFKIVSYTHPRFERK 249 (336)
T ss_pred cccCCceeeeeccCCcceecccCCceeeeEEecccceecC
Confidence 99999999999999999999999999 5567777666554
No 2
>COG0484 DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=3.4e-41 Score=318.27 Aligned_cols=197 Identities=31% Similarity=0.438 Sum_probs=160.8
Q ss_pred CCCCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHhhhhhccccCCccccccccccCccccccCCcc
Q 023217 13 TIRRDPYEVLCVSRDSSDQEIKTAYRKLALKYHPDKNVSNPEAAELFKEVAYSYSILSDPEKRRHYDNAGFEAIDAEGMD 92 (285)
Q Consensus 13 ~~~~d~Y~iLgv~~~as~~eIk~ayrklal~~HPDk~~~~~~a~~~f~~i~~AY~vLsdp~~R~~YD~~G~~~~~~~~~~ 92 (285)
+..+|||+||||+++||.+|||+||||||++||||+|+++++|+++|++|++||+|||||+||+.||+||.+++..++.+
T Consensus 1 ~~~~dyYeiLGV~k~As~~EIKkAYRkLA~kyHPD~n~g~~~AeeKFKEI~eAYEVLsD~eKRa~YD~fG~~~~~~gg~g 80 (371)
T COG0484 1 MAKRDYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNPGDKEAEEKFKEINEAYEVLSDPEKRAAYDQFGHAGFKAGGFG 80 (371)
T ss_pred CCccchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHhhccCccccccCCcC
Confidence 45789999999999999999999999999999999999999999999999999999999999999999999988643322
Q ss_pred ccccccccc-cHHHHHHHhhcc------------CCCCceeeechhhHHHHhCCceeEee--------cCCCCcccc-cc
Q 023217 93 MEIDLSNLG-TVNTMFAALFSK------------LGVPIKTTISANVLEEALNGTVTVRP--------LPIGTSVSG-KV 150 (285)
Q Consensus 93 ~~~d~~~~g-~~~~~F~~~F~~------------~G~~i~~~i~~~~Lee~y~G~~~~~~--------l~~G~~~~~-k~ 150 (285)
.. .+++++ ++++||..||++ .|.++.+.+.+ +|+|++.|.+.... .|.|+++.. +.
T Consensus 81 g~-g~~~fgg~~~DIF~~~FgGg~~~~~~~~~~~rG~Dl~~~l~i-sleEa~~G~~~~i~~~~~~~C~~C~GsGak~gt~ 158 (371)
T COG0484 81 GF-GFGGFGGDFGDIFEDFFGGGGGGRRRPNRPRRGADLRYNLEI-TLEEAVFGVKKEIRVTRSVTCSTCHGSGAKPGTD 158 (371)
T ss_pred CC-CcCCCCCCHHHHHHHhhcCCCcccCCCCCcccCCceEEEEEe-EhhhhccCceeeEecceeeECCcCCCCCCCCCCC
Confidence 21 444455 589999999942 45678888999 69999999975443 477888743 35
Q ss_pred ccccccccceeEEEEEccceeEEEEEecCcccchhcccccccCcceeee-eccccccCCcee--cccceEeeeeee
Q 023217 151 EKQCAHFFGVTINDQQAEAGIVVRVTSTAQSKFKLLYFEQDTNGGYGLA-LQEDSEKTGKVT--SAGMYFLHFQVY 223 (285)
Q Consensus 151 ~k~c~~c~G~~i~~~q~~~G~v~q~qs~~~~kfk~~~f~~~~cgG~g~~-~q~~s~c~~~~t--~~~~~~~~~~~~ 223 (285)
.++|+.|.|.+.+.+.... .+++++++|.. |+|.|.. .++|+.|+|..+ ......+..|.-
T Consensus 159 ~~tC~tC~G~G~v~~~~~~-g~~~~~~~C~~-----------C~G~G~~i~~pC~~C~G~G~v~~~~~i~V~IPaG 222 (371)
T COG0484 159 PKTCPTCNGSGQVRTVQRT-GFFSFQQTCPT-----------CNGTGKIIKDPCGKCKGKGRVKKKKSISVNIPAG 222 (371)
T ss_pred CCcCCCCCCcCeEEEEEee-eEEEEEEECCC-----------CccceeECCCCCCCCCCCCeEeeeeEEEEECCCC
Confidence 6789999988665555444 67788889977 9999966 799999999886 555566666643
No 3
>PRK14288 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=2.3e-34 Score=275.25 Aligned_cols=191 Identities=28% Similarity=0.386 Sum_probs=145.5
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHhhhhhccccCCccccccccccCccccccCCcccc
Q 023217 15 RRDPYEVLCVSRDSSDQEIKTAYRKLALKYHPDKNVSNPEAAELFKEVAYSYSILSDPEKRRHYDNAGFEAIDAEGMDME 94 (285)
Q Consensus 15 ~~d~Y~iLgv~~~as~~eIk~ayrklal~~HPDk~~~~~~a~~~f~~i~~AY~vLsdp~~R~~YD~~G~~~~~~~~~~~~ 94 (285)
..|||+||||+++||.+|||+|||+||++||||+|+.+++|+++|++|++||+||+||++|+.||++|+.++...+.. .
T Consensus 2 ~~dyY~vLgv~~~As~~eIkkayrkla~k~HPD~~~~~~~a~~~f~~i~~AYevLsd~~kR~~YD~~G~~~~~~~~~~-~ 80 (369)
T PRK14288 2 ELSYYEILEVEKHSNQETIKKSYRKLALKYHPDRNAGDKEAEEKFKLINEAYGVLSDEKKRALYDRYGKKGLNQAGAS-Q 80 (369)
T ss_pred CCChHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCccHHHHHHHHHHHHHHHhccHHHHHHHHHhcccccccCCCC-c
Confidence 369999999999999999999999999999999998778899999999999999999999999999998776532111 0
Q ss_pred ccccc-cccHHHHHHHhhcc-----------CCCCceeeechhhHHHHhCCceeEeec--------CCCCcccccccccc
Q 023217 95 IDLSN-LGTVNTMFAALFSK-----------LGVPIKTTISANVLEEALNGTVTVRPL--------PIGTSVSGKVEKQC 154 (285)
Q Consensus 95 ~d~~~-~g~~~~~F~~~F~~-----------~G~~i~~~i~~~~Lee~y~G~~~~~~l--------~~G~~~~~k~~k~c 154 (285)
.++++ ++.+.++|..+|++ .|.++...+.+ +|+++|+|.++...+ |.|++......++|
T Consensus 81 ~~~~~~f~~~~~~F~~~fg~g~~~~~~~~~~~g~di~~~l~v-slee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~C 159 (369)
T PRK14288 81 SDFSDFFEDLGSFFEDAFGFGARGSKRQKSSIAPDYLQTIEL-SFKEAVFGCKKTIKVQYQSVCESCDGTGAKDKALETC 159 (369)
T ss_pred cccccchhhHHHHHHhhcCCCCcccCcCCCCCCCCeeEeccc-cHHHHhCCeEEEEEEEeeccCCCCCCcccCCCCCcCC
Confidence 11222 23455678877752 23567778888 699999998754432 56777644445689
Q ss_pred ccccceeEEEEEccceeEEEEEecCcccchhcccccccCcceeee-eccccccCCceeccc--ceEeeee
Q 023217 155 AHFFGVTINDQQAEAGIVVRVTSTAQSKFKLLYFEQDTNGGYGLA-LQEDSEKTGKVTSAG--MYFLHFQ 221 (285)
Q Consensus 155 ~~c~G~~i~~~q~~~G~v~q~qs~~~~kfk~~~f~~~~cgG~g~~-~q~~s~c~~~~t~~~--~~~~~~~ 221 (285)
..|.|.++...+. |++ +++++|.. |+|.|+. .+.|..|.|+.+... ...+..|
T Consensus 160 ~~C~G~G~~~~~~--g~~-~~~~~C~~-----------C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~IP 215 (369)
T PRK14288 160 KQCNGQGQVFMRQ--GFM-SFAQTCGA-----------CQGKGKIIKTPCQACKGKTYILKDEEIDAIIP 215 (369)
T ss_pred CCCCCCcEEEEEe--ceE-EEEEecCC-----------CCCCceEccccCccCCCcceEEEEEEEEEecC
Confidence 9999887665543 666 56668877 9999966 899999999875433 3334444
No 4
>PRK14296 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=6.2e-34 Score=272.57 Aligned_cols=193 Identities=27% Similarity=0.411 Sum_probs=146.1
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHhhhhhccccCCccccccccccCccccccC-Cccc
Q 023217 15 RRDPYEVLCVSRDSSDQEIKTAYRKLALKYHPDKNVSNPEAAELFKEVAYSYSILSDPEKRRHYDNAGFEAIDAE-GMDM 93 (285)
Q Consensus 15 ~~d~Y~iLgv~~~as~~eIk~ayrklal~~HPDk~~~~~~a~~~f~~i~~AY~vLsdp~~R~~YD~~G~~~~~~~-~~~~ 93 (285)
.+|||+||||+++||.+|||+|||+||++||||+|+ ++.|+++|++|++||+|||||++|+.||++|+++++.. +...
T Consensus 3 ~~dyY~~Lgv~~~a~~~eik~ayrkla~~~HPD~n~-~~~a~~~F~~i~~AyevLsD~~KR~~YD~~G~~~~~~~~~~~~ 81 (372)
T PRK14296 3 KKDYYEVLGVSKTASEQEIRQAYRKLAKQYHPDLNK-SPDAHDKMVEINEAADVLLDKDKRKQYDQFGHAAFDGSSGFSS 81 (372)
T ss_pred CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCC-CchHHHHHHHHHHHHHHhcCHHHhhhhhhccchhhcCCCCcCc
Confidence 479999999999999999999999999999999997 57899999999999999999999999999998776421 1000
Q ss_pred c-ccc----c-----ccccHHHHHHHhhcc---------CCCCceeeechhhHHHHhCCceeEeec--------CCCCcc
Q 023217 94 E-IDL----S-----NLGTVNTMFAALFSK---------LGVPIKTTISANVLEEALNGTVTVRPL--------PIGTSV 146 (285)
Q Consensus 94 ~-~d~----~-----~~g~~~~~F~~~F~~---------~G~~i~~~i~~~~Lee~y~G~~~~~~l--------~~G~~~ 146 (285)
. .++ + ++..+.++|..||++ .|.++...+.+ +|+++|+|..+...+ |.|++.
T Consensus 82 ~~~~~~~~~~~~~~~g~~~f~d~f~~~fggg~~~~~~~~~g~di~~~l~l-tlee~~~G~~~~i~~~~~~~C~~C~G~G~ 160 (372)
T PRK14296 82 NFGDFEDLFSNMGSSGFSSFTNIFSDFFGSNKSDYQRSTKGQSVSLDIYL-TFKELLFGVDKIIELDLLTNCSKCFGSGA 160 (372)
T ss_pred CCCccccccccccccccccchhhhhhhcCCCccCCCCcCCCCCeEEEeec-cHHHhhCCeeEEEEEeeeeccCCCCCCcc
Confidence 0 010 0 123456889999973 24578888888 699999998764433 567776
Q ss_pred cc-ccccccccccceeEEE--EEccceeEEEEEecCcccchhcccccccCcceeee-eccccccCCceeccc--ceEeee
Q 023217 147 SG-KVEKQCAHFFGVTIND--QQAEAGIVVRVTSTAQSKFKLLYFEQDTNGGYGLA-LQEDSEKTGKVTSAG--MYFLHF 220 (285)
Q Consensus 147 ~~-k~~k~c~~c~G~~i~~--~q~~~G~v~q~qs~~~~kfk~~~f~~~~cgG~g~~-~q~~s~c~~~~t~~~--~~~~~~ 220 (285)
.. ....+|..|.|.++.. ++.++ +++|++++|.. |+|.|+. ...|+.|.|+.+..+ ...+..
T Consensus 161 ~~~~~~~~C~~C~G~G~~~~~~~~g~-~~~q~~~~C~~-----------C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~I 228 (372)
T PRK14296 161 ESNSDIHICNNCHGTGEVLVQKNMGF-FQFQQSAKCNV-----------CNGAGKIIKNKCKNCKGKGKYLERKKIEVNI 228 (372)
T ss_pred CCCCCCccCCCCCCCceEEEEEeccc-eEEEEEecCCC-----------cCCcceeecccccCCCCceEEEEEEEEEEEE
Confidence 32 2346799998765544 44444 45688899987 9999976 889999999876443 344444
Q ss_pred e
Q 023217 221 Q 221 (285)
Q Consensus 221 ~ 221 (285)
|
T Consensus 229 p 229 (372)
T PRK14296 229 P 229 (372)
T ss_pred C
Confidence 4
No 5
>PRK14286 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=2.2e-33 Score=268.73 Aligned_cols=186 Identities=32% Similarity=0.501 Sum_probs=146.1
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHhhhhhccccCCccccccccccCccccccC--Ccc
Q 023217 15 RRDPYEVLCVSRDSSDQEIKTAYRKLALKYHPDKNVSNPEAAELFKEVAYSYSILSDPEKRRHYDNAGFEAIDAE--GMD 92 (285)
Q Consensus 15 ~~d~Y~iLgv~~~as~~eIk~ayrklal~~HPDk~~~~~~a~~~f~~i~~AY~vLsdp~~R~~YD~~G~~~~~~~--~~~ 92 (285)
.+|||+||||+++||.+|||+|||+||++||||+|+++++|.++|++|++||+||+||.+|+.||++|++++... +..
T Consensus 3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g~~~~~~~~~ 82 (372)
T PRK14286 3 ERSYYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKGNKESEEKFKEATEAYEILRDPKKRQAYDQFGKAGVNAGAGGFG 82 (372)
T ss_pred CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHhccHHHHHHHHHhCchhhccccCCCC
Confidence 479999999999999999999999999999999998778899999999999999999999999999998876421 101
Q ss_pred cc--ccccc-cccHHHHHHHhhcc---------------CCCCceeeechhhHHHHhCCceeEeec--------CCCCcc
Q 023217 93 ME--IDLSN-LGTVNTMFAALFSK---------------LGVPIKTTISANVLEEALNGTVTVRPL--------PIGTSV 146 (285)
Q Consensus 93 ~~--~d~~~-~g~~~~~F~~~F~~---------------~G~~i~~~i~~~~Lee~y~G~~~~~~l--------~~G~~~ 146 (285)
.. .++.. +++++++|..||++ .|.++...+.+ +|||+|+|.++...+ |.|++.
T Consensus 83 ~~~~~~~~~~~~~~~d~f~~ffgg~~~~~~~~~~~~~~~~g~di~~~l~v-tLee~~~G~~k~i~~~r~~~C~~C~G~G~ 161 (372)
T PRK14286 83 QGAYTDFSDIFGDFGDIFGDFFGGGRGGGSGGGRRSGPQRGSDLRYNLEV-SLEDAALGREYKIEIPRLESCVDCNGSGA 161 (372)
T ss_pred CCCcccccccccchhhHHHHhhCCCccCCCcccccCCCCCCCCeeEEEEE-EHHHHhCCeeEEEEeeccccCCCCcCCCc
Confidence 00 01111 23567899999973 23467777888 699999999865543 567776
Q ss_pred cc-ccccccccccceeEEEEEccceeEEEEEecCcccchhcccccccCcceeee-eccccccCCceecccc
Q 023217 147 SG-KVEKQCAHFFGVTINDQQAEAGIVVRVTSTAQSKFKLLYFEQDTNGGYGLA-LQEDSEKTGKVTSAGM 215 (285)
Q Consensus 147 ~~-k~~k~c~~c~G~~i~~~q~~~G~v~q~qs~~~~kfk~~~f~~~~cgG~g~~-~q~~s~c~~~~t~~~~ 215 (285)
.. .....|..|.|.++..... |+++ ++++|.. |+|.|+. ...|+.|.|+.+..+.
T Consensus 162 ~~~~~~~~C~~C~G~G~v~~~~--G~~~-~~~~C~~-----------C~G~G~~~~~~C~~C~G~g~~~~~ 218 (372)
T PRK14286 162 SKGSSPTTCPDCGGSGQIRRTQ--GFFS-VATTCPT-----------CRGKGTVISNPCKTCGGQGLQEKR 218 (372)
T ss_pred CCCCCCccCCCCcCeEEEEEEe--ceEE-EEEeCCC-----------CCceeeEecccCCCCCCCcEEecc
Confidence 32 2346799999987766653 7774 7789977 9999966 8899999999865544
No 6
>KOG0712 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.2e-33 Score=263.79 Aligned_cols=176 Identities=34% Similarity=0.485 Sum_probs=139.9
Q ss_pred CCCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHhhhhhccccCCccccccccccCccccccCCccc
Q 023217 14 IRRDPYEVLCVSRDSSDQEIKTAYRKLALKYHPDKNVSNPEAAELFKEVAYSYSILSDPEKRRHYDNAGFEAIDAEGMDM 93 (285)
Q Consensus 14 ~~~d~Y~iLgv~~~as~~eIk~ayrklal~~HPDk~~~~~~a~~~f~~i~~AY~vLsdp~~R~~YD~~G~~~~~~~~~~~ 93 (285)
....||+||||+++||++|||+|||+||++|||||||+ |.++|++|++||+|||||++|++||++|++++..++.+.
T Consensus 2 ~~~~~y~il~v~~~As~~eikkayrkla~k~HpDkn~~---~~ekfkei~~AyevLsd~ekr~~yD~~g~~~~~~g~~~~ 78 (337)
T KOG0712|consen 2 KNTKLYDILGVSPDASEEEIKKAYRKLALKYHPDKNPD---AGEKFKEISQAYEVLSDPEKREIYDQYGEEGLQGGGGGG 78 (337)
T ss_pred cccccceeeccCCCcCHHHHHHHHHHHHHHhCCCCCcc---HHHHHHHHHHHHHHhcCHHHHHHHHhhhhhhhcccCCCC
Confidence 35789999999999999999999999999999999975 789999999999999999999999999999986544332
Q ss_pred cccccccccHHHHHHHhhcc-------CCCCceeeechhhHHHHhCCceeEee--------cCCCCcccccccccccccc
Q 023217 94 EIDLSNLGTVNTMFAALFSK-------LGVPIKTTISANVLEEALNGTVTVRP--------LPIGTSVSGKVEKQCAHFF 158 (285)
Q Consensus 94 ~~d~~~~g~~~~~F~~~F~~-------~G~~i~~~i~~~~Lee~y~G~~~~~~--------l~~G~~~~~k~~k~c~~c~ 158 (285)
+ ++.+..+|. |++ .|.++.+.+.+ +||++|.|.+.... .|.|.+........|..|.
T Consensus 79 g-----~~~f~~~F~--~g~~~~~~~~rg~~~~~~~~~-~Le~~y~G~s~kl~l~~~~iCs~C~GsGgksg~~~~C~~C~ 150 (337)
T KOG0712|consen 79 G-----FGGFSQFFG--FGGNGGRGRQRGKDVVHQLKV-TLEELYMGKSKKLFLSRNFICSKCSGSGGKSGSAPKCTTCR 150 (337)
T ss_pred C-----CccHHHhcc--CCCcCccccccCCCceEEEEE-EHHHhhcCCccceecccCccCCcCCCCCCCCCCCCCCCCCC
Confidence 1 112333333 222 46789999999 79999999654332 3445554333334688886
Q ss_pred --ceeEEEEEccceeEEEEEecCcccchhcccccccCcceeee---eccccccCCcee
Q 023217 159 --GVTINDQQAEAGIVVRVTSTAQSKFKLLYFEQDTNGGYGLA---LQEDSEKTGKVT 211 (285)
Q Consensus 159 --G~~i~~~q~~~G~v~q~qs~~~~kfk~~~f~~~~cgG~g~~---~q~~s~c~~~~t 211 (285)
|+.+..++.++||+|++++.|.+ |.|.|.. ...|..|.|..+
T Consensus 151 GsGv~~~~~~~gPg~~qs~q~~C~~-----------C~G~G~~~~~kd~C~~C~G~~~ 197 (337)
T KOG0712|consen 151 GSGVQTRTRQMGPGMVQSPQLVCDS-----------CNGSGETISLKDRCKTCSGAKV 197 (337)
T ss_pred CCCceeEEEeccccccccceeEecc-----------CCCccccccccccCcccccchh
Confidence 45778889999999999999988 9998864 789999998874
No 7
>PRK14285 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=6.3e-33 Score=265.05 Aligned_cols=191 Identities=32% Similarity=0.443 Sum_probs=148.5
Q ss_pred CCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHhhhhhccccCCccccccccccCccccccCCc--cc
Q 023217 16 RDPYEVLCVSRDSSDQEIKTAYRKLALKYHPDKNVSNPEAAELFKEVAYSYSILSDPEKRRHYDNAGFEAIDAEGM--DM 93 (285)
Q Consensus 16 ~d~Y~iLgv~~~as~~eIk~ayrklal~~HPDk~~~~~~a~~~f~~i~~AY~vLsdp~~R~~YD~~G~~~~~~~~~--~~ 93 (285)
+|||+||||+++||.+|||+|||+||++||||+|+++++|.++|++|++||+||+||.+|+.||++|+.++...+. .+
T Consensus 3 ~d~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yd~~g~~~~~~~~~~~~~ 82 (365)
T PRK14285 3 RDYYEILGLSKGASKDEIKKAYRKIAIKYHPDKNKGNKEAESIFKEATEAYEVLIDDNKRAQYDRFGHTAFEGGGGFEGF 82 (365)
T ss_pred CCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHcCcchhHHHHhcCcchhccCCCcccc
Confidence 6999999999999999999999999999999999988889999999999999999999999999999877643211 10
Q ss_pred cccccc----cccHHHHHHHhhcc-----------CCCCceeeechhhHHHHhCCceeEeec--------CCCCcccc-c
Q 023217 94 EIDLSN----LGTVNTMFAALFSK-----------LGVPIKTTISANVLEEALNGTVTVRPL--------PIGTSVSG-K 149 (285)
Q Consensus 94 ~~d~~~----~g~~~~~F~~~F~~-----------~G~~i~~~i~~~~Lee~y~G~~~~~~l--------~~G~~~~~-k 149 (285)
...+.+ ++++.++|..||++ .|.++...+.+ +||++|+|.++...+ |.|++... .
T Consensus 83 ~~g~~~~~~~~~~~~d~f~~~fgg~~~~~~~~~~~~g~di~~~l~v-tlee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~ 161 (365)
T PRK14285 83 SGGFSGFSDIFEDFGDIFDSFFTGNRGQDKNRKHEKGQDLTYQIEI-SLEDAYLGYKNNINITRNMLCESCLGKKSEKGT 161 (365)
T ss_pred CCCccccccccccHHHHHHHhhcCCcCCCCCcCCCCCCCEEEEEEE-EHHHhhCCeEEEEEeeecccCCCCCCcccCCCC
Confidence 001111 23467899999973 23467777888 699999998765433 66777632 3
Q ss_pred cccccccccceeEEEEEccceeEEEEEecCcccchhcccccccCcceeee-eccccccCCceeccc--ceEeeee
Q 023217 150 VEKQCAHFFGVTINDQQAEAGIVVRVTSTAQSKFKLLYFEQDTNGGYGLA-LQEDSEKTGKVTSAG--MYFLHFQ 221 (285)
Q Consensus 150 ~~k~c~~c~G~~i~~~q~~~G~v~q~qs~~~~kfk~~~f~~~~cgG~g~~-~q~~s~c~~~~t~~~--~~~~~~~ 221 (285)
....|..|.|.++..+ .+|++ +++++|.. |+|.|.. .+.|..|.|+.+..+ ...+..|
T Consensus 162 ~~~~C~~C~G~G~~~~--~~G~~-~~~~~C~~-----------C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip 222 (365)
T PRK14285 162 SPSICNMCNGSGRVMQ--GGGFF-RVTTTCPK-----------CYGNGKIISNPCKSCKGKGSLKKKETIELKIP 222 (365)
T ss_pred CCccCCCccCceeEEe--cCcee-EEeeecCC-----------CCCcccccCCCCCCCCCCCEEeccEEEEEEEC
Confidence 3467999999876654 56887 78999987 9999966 899999999885443 3444444
No 8
>PRK14298 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=8.6e-33 Score=265.10 Aligned_cols=195 Identities=31% Similarity=0.422 Sum_probs=147.8
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHhhhhhccccCCccccccccccCccccccCC-ccc
Q 023217 15 RRDPYEVLCVSRDSSDQEIKTAYRKLALKYHPDKNVSNPEAAELFKEVAYSYSILSDPEKRRHYDNAGFEAIDAEG-MDM 93 (285)
Q Consensus 15 ~~d~Y~iLgv~~~as~~eIk~ayrklal~~HPDk~~~~~~a~~~f~~i~~AY~vLsdp~~R~~YD~~G~~~~~~~~-~~~ 93 (285)
.+|||+||||+++|+.+|||+|||+||++||||+|+ ++.|+++|++|++||+||+||.+|+.||++|.++++... ...
T Consensus 4 ~~d~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~-~~~~~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g~~~~~~~~~ 82 (377)
T PRK14298 4 TRDYYEILGLSKDASVEDIKKAYRKLAMKYHPDKNK-EPDAEEKFKEISEAYAVLSDAEKRAQYDRFGHAGIDNQYSAED 82 (377)
T ss_pred CCCHHHhhCCCCCCCHHHHHHHHHHHHHHhCccccC-ChhHHHHHHHHHHHHHHhcchHhhhhhhhcCccccccccCccc
Confidence 369999999999999999999999999999999997 477889999999999999999999999999987764311 000
Q ss_pred cccccccccHHHHHHHhhcc----------CCCCceeeechhhHHHHhCCceeEeec--------CCCCcccc-cccccc
Q 023217 94 EIDLSNLGTVNTMFAALFSK----------LGVPIKTTISANVLEEALNGTVTVRPL--------PIGTSVSG-KVEKQC 154 (285)
Q Consensus 94 ~~d~~~~g~~~~~F~~~F~~----------~G~~i~~~i~~~~Lee~y~G~~~~~~l--------~~G~~~~~-k~~k~c 154 (285)
.+...+++++.++|..||++ .|.++...+.+ +|+++|+|.++...+ |.|++... ....+|
T Consensus 83 ~~~~~~~~~~~d~f~~~Fgg~~~~~~~~~~~g~di~~~l~v-slee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C 161 (377)
T PRK14298 83 IFRGADFGGFGDIFEMFFGGGGRRGRMGPRRGSDLRYDLYI-TLEEAAFGVRKDIDVPRAERCSTCSGTGAKPGTSPKRC 161 (377)
T ss_pred ccccCCcCcchhhhHhhhcCCCccCCCCCCCCCCEEEEEEE-EHHHhhCCeEEEEEEEeeccCCCCCCCcccCCCCCCcC
Confidence 00111234467899999973 24577788888 699999998765433 56777632 334679
Q ss_pred ccccceeEEEE-EccceeEEEEEecCcccchhcccccccCcceeee-eccccccCCceecccc--eEeeeee
Q 023217 155 AHFFGVTINDQ-QAEAGIVVRVTSTAQSKFKLLYFEQDTNGGYGLA-LQEDSEKTGKVTSAGM--YFLHFQV 222 (285)
Q Consensus 155 ~~c~G~~i~~~-q~~~G~v~q~qs~~~~kfk~~~f~~~~cgG~g~~-~q~~s~c~~~~t~~~~--~~~~~~~ 222 (285)
..|.|.++... +..++++++++++|.. |+|.|++ ...|..|.|+.+..+. ..+..|.
T Consensus 162 ~~C~G~G~~~~~~~~~~g~~~~~~~C~~-----------C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ipp 222 (377)
T PRK14298 162 PTCGGTGQVTTTRSTPLGQFVTTTTCST-----------CHGRGQVIESPCPVCSGTGKVRKTRKITVNVPA 222 (377)
T ss_pred CCCCCccEEEEEEecCceeEEEEEeCCC-----------CCCCCcccCCCCCCCCCccEEEEEEEEEecCCC
Confidence 99987754332 2345566789999988 9999966 8899999998865443 4444443
No 9
>PTZ00037 DnaJ_C chaperone protein; Provisional
Probab=100.00 E-value=9.4e-33 Score=267.73 Aligned_cols=182 Identities=31% Similarity=0.434 Sum_probs=143.6
Q ss_pred CCCCCCCCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHhhhhhccccCCccccccccccCcccccc
Q 023217 9 SSAPTIRRDPYEVLCVSRDSSDQEIKTAYRKLALKYHPDKNVSNPEAAELFKEVAYSYSILSDPEKRRHYDNAGFEAIDA 88 (285)
Q Consensus 9 ~~~~~~~~d~Y~iLgv~~~as~~eIk~ayrklal~~HPDk~~~~~~a~~~f~~i~~AY~vLsdp~~R~~YD~~G~~~~~~ 88 (285)
++..+..+|||+||||+++||.+|||+|||+||++||||||++ .++|++|++||+||+||.+|+.||.+|..++..
T Consensus 21 ~~~~~~~~d~Y~vLGV~~~As~~eIKkAYrkla~k~HPDk~~~----~e~F~~i~~AYevLsD~~kR~~YD~~G~~~~~~ 96 (421)
T PTZ00037 21 RKREVDNEKLYEVLNLSKDCTTSEIKKAYRKLAIKHHPDKGGD----PEKFKEISRAYEVLSDPEKRKIYDEYGEEGLEG 96 (421)
T ss_pred ccccccchhHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCch----HHHHHHHHHHHHHhccHHHHHHHhhhcchhccc
Confidence 3444557899999999999999999999999999999999862 489999999999999999999999999877642
Q ss_pred CCccccccccccccHHHHHHHhhcc--------CCCCceeeechhhHHHHhCCceeEee--------cCCCCcccccccc
Q 023217 89 EGMDMEIDLSNLGTVNTMFAALFSK--------LGVPIKTTISANVLEEALNGTVTVRP--------LPIGTSVSGKVEK 152 (285)
Q Consensus 89 ~~~~~~~d~~~~g~~~~~F~~~F~~--------~G~~i~~~i~~~~Lee~y~G~~~~~~--------l~~G~~~~~k~~k 152 (285)
.+. .+++.++|..||++ .|.++...+.+ +|+++|+|.++... .|.|++.......
T Consensus 97 ~~~--------~~d~~d~f~~~Fggg~~~~~~~rg~di~~~l~v-tLee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~ 167 (421)
T PTZ00037 97 GEQ--------PADASDLFDLIFGGGRKPGGKKRGEDIVSHLKV-TLEQIYNGAMRKLAINKDVICANCEGHGGPKDAFV 167 (421)
T ss_pred CCC--------CcchhhhHHHhhccccccccccCCCCEEEEeee-eHHHHhCCCceEEEeeccccccccCCCCCCCCCCc
Confidence 211 12356888888873 35678888888 69999999876443 2667776544456
Q ss_pred ccccccceeE--EEEEccceeEEEEEecCcccchhcccccccCcceeeee---ccccccCCceecccc
Q 023217 153 QCAHFFGVTI--NDQQAEAGIVVRVTSTAQSKFKLLYFEQDTNGGYGLAL---QEDSEKTGKVTSAGM 215 (285)
Q Consensus 153 ~c~~c~G~~i--~~~q~~~G~v~q~qs~~~~kfk~~~f~~~~cgG~g~~~---q~~s~c~~~~t~~~~ 215 (285)
.|..|.|.++ ..++.++ |+++++++|.. |+|.|+.+ ..|..|.|+.+..+.
T Consensus 168 ~C~~C~G~G~~~~~~~~g~-~~~q~~~~C~~-----------C~G~G~~i~~~~~C~~C~G~g~v~~~ 223 (421)
T PTZ00037 168 DCKLCNGQGIRVQIRQMGS-MIHQTQSTCNS-----------CNGQGKIIPESKKCKNCSGKGVKKTR 223 (421)
T ss_pred cCCCCCCCCeEEEEEeecc-eeeEEEEeCCC-----------CCCcceeccccccCCcCCCcceeeee
Confidence 7999987654 4444444 78899999988 99999764 789999998765443
No 10
>PRK14294 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=1.5e-32 Score=262.58 Aligned_cols=187 Identities=32% Similarity=0.492 Sum_probs=145.5
Q ss_pred CCCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHhhhhhccccCCccccccccccCccccccCCccc
Q 023217 14 IRRDPYEVLCVSRDSSDQEIKTAYRKLALKYHPDKNVSNPEAAELFKEVAYSYSILSDPEKRRHYDNAGFEAIDAEGMDM 93 (285)
Q Consensus 14 ~~~d~Y~iLgv~~~as~~eIk~ayrklal~~HPDk~~~~~~a~~~f~~i~~AY~vLsdp~~R~~YD~~G~~~~~~~~~~~ 93 (285)
..+|||+||||+++||.+|||+|||+||++||||+++++++|+++|++|++||+||+||.+|+.||++|++++...+...
T Consensus 2 ~~~d~y~~lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~~~~f~~~~~Ay~vL~d~~~r~~yD~~G~~g~~~~~~~~ 81 (366)
T PRK14294 2 VKRDYYEILGVTRDASEEEIKKSYRKLAMKYHPDRNPGDKEAEELFKEAAEAYEVLSDPKKRGIYDQYGHEGLSGTGFSG 81 (366)
T ss_pred CCCChHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHhccHHHHHHHHhhccccccCCCCCC
Confidence 35799999999999999999999999999999999988888999999999999999999999999999988765321110
Q ss_pred ccccc-ccccHHHHHHHhhc-c------------CCCCceeeechhhHHHHhCCceeEeec--------CCCCcccc-cc
Q 023217 94 EIDLS-NLGTVNTMFAALFS-K------------LGVPIKTTISANVLEEALNGTVTVRPL--------PIGTSVSG-KV 150 (285)
Q Consensus 94 ~~d~~-~~g~~~~~F~~~F~-~------------~G~~i~~~i~~~~Lee~y~G~~~~~~l--------~~G~~~~~-k~ 150 (285)
..++. .+..+.++|..||+ + .|.++...+.+ +||++|+|..+...+ |.|++... ..
T Consensus 82 ~~~~~~~~~~~~d~f~~~fg~g~~~~~~~~~~~~~g~d~~~~l~l-slee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~ 160 (366)
T PRK14294 82 FSGFDDIFSSFGDIFEDFFGFGGGRRGRSRTAVRAGADLRYDLTL-PFLEAAFGTEKEIRIQKLETCEECHGSGCEPGTS 160 (366)
T ss_pred cCccccchhhhhhhHHHhhccCCCcCCcccCCCCCCCCceEEEEe-eHHHhcCCeEEEEEeeecccCCCCCCccccCCCC
Confidence 00111 12345688998886 2 13467777888 699999998764433 55766532 22
Q ss_pred ccccccccceeEEEEEccceeEEEEEecCcccchhcccccccCcceeee-eccccccCCceecccc
Q 023217 151 EKQCAHFFGVTINDQQAEAGIVVRVTSTAQSKFKLLYFEQDTNGGYGLA-LQEDSEKTGKVTSAGM 215 (285)
Q Consensus 151 ~k~c~~c~G~~i~~~q~~~G~v~q~qs~~~~kfk~~~f~~~~cgG~g~~-~q~~s~c~~~~t~~~~ 215 (285)
...|..|.|.++..++. |+++ ++++|.. |+|.|+. ...|..|.|+.+..+.
T Consensus 161 ~~~C~~C~G~G~~~~~~--G~~~-~~~~C~~-----------C~G~G~~~~~~C~~C~G~g~v~~~ 212 (366)
T PRK14294 161 PTTCPQCGGSGQVTQSQ--GFFS-IRTTCPR-----------CRGMGKVIVSPCKTCHGQGRVRVS 212 (366)
T ss_pred cccCCCcCCeEEEEEEe--eeEE-EEeeCCC-----------CCCcCeecCcCCCCCCCceEeecc
Confidence 45799999988776654 7774 7889987 9999976 8999999998865443
No 11
>PRK14276 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=1.6e-32 Score=263.54 Aligned_cols=187 Identities=30% Similarity=0.444 Sum_probs=145.0
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHhhhhhccccCCccccccccccCccccccC-Cc--
Q 023217 15 RRDPYEVLCVSRDSSDQEIKTAYRKLALKYHPDKNVSNPEAAELFKEVAYSYSILSDPEKRRHYDNAGFEAIDAE-GM-- 91 (285)
Q Consensus 15 ~~d~Y~iLgv~~~as~~eIk~ayrklal~~HPDk~~~~~~a~~~f~~i~~AY~vLsdp~~R~~YD~~G~~~~~~~-~~-- 91 (285)
.+|||+||||+++||.+|||+|||+||++||||+|+ ++.|+++|++|++||+||+||.+|+.||++|++++... +.
T Consensus 3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~-~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~~~~~~~~~~~ 81 (380)
T PRK14276 3 NTEYYDRLGVSKDASQDEIKKAYRKLSKKYHPDINK-EPGAEEKYKEVQEAYETLSDPQKRAAYDQYGAAGANGGFGGGA 81 (380)
T ss_pred CCCHHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCC-CcCHHHHHHHHHHHHHHhcCHhhhhhHhhcCCccccCCCCCCC
Confidence 479999999999999999999999999999999998 47889999999999999999999999999998876431 00
Q ss_pred -c-ccccc-cccccHHHHHHHhhcc-----------CCCCceeeechhhHHHHhCCceeEeec--------CCCCcccc-
Q 023217 92 -D-MEIDL-SNLGTVNTMFAALFSK-----------LGVPIKTTISANVLEEALNGTVTVRPL--------PIGTSVSG- 148 (285)
Q Consensus 92 -~-~~~d~-~~~g~~~~~F~~~F~~-----------~G~~i~~~i~~~~Lee~y~G~~~~~~l--------~~G~~~~~- 148 (285)
. .+++. .+++++.++|..||++ .|.++...+.+ +||++|+|..+...+ |.|++...
T Consensus 82 ~~~~~~~~~~~~~~~~d~f~~~fgg~~~~~~~~~~~~g~di~~~l~v-tLee~~~G~~~~i~~~~~~~C~~C~G~G~~~~ 160 (380)
T PRK14276 82 GGFGGFDGSGGFGGFEDIFSSFFGGGGARRNPNAPRQGDDLQYRVNL-DFEEAIFGKEKEVSYNREATCHTCNGSGAKPG 160 (380)
T ss_pred CCCCCccccccccchhhHHHHHhCccccccCcCCCCCCCCEEEEEEE-EHHHhcCCeEEEEEeeccccCCCCcCcccCCC
Confidence 1 01111 1234567899999973 24567778888 699999998764433 66777632
Q ss_pred ccccccccccceeE--EEEEccceeEEEEEecCcccchhcccccccCcceeee-eccccccCCceecccc
Q 023217 149 KVEKQCAHFFGVTI--NDQQAEAGIVVRVTSTAQSKFKLLYFEQDTNGGYGLA-LQEDSEKTGKVTSAGM 215 (285)
Q Consensus 149 k~~k~c~~c~G~~i--~~~q~~~G~v~q~qs~~~~kfk~~~f~~~~cgG~g~~-~q~~s~c~~~~t~~~~ 215 (285)
.....|..|.|.++ ..++..+|++++ +++|.. |+|.|+. ...|..|.|+.+..+.
T Consensus 161 ~~~~~C~~C~G~G~~~~~~~~~~G~~~~-~~~C~~-----------C~G~G~~~~~~C~~C~G~g~~~~~ 218 (380)
T PRK14276 161 TSPVTCGKCHGSGVITVDTQTPLGMMRR-QVTCDV-----------CHGTGKEIKEPCQTCHGTGHEKQA 218 (380)
T ss_pred CCCccCCCCCCeeEEEEEEecCCceEEE-EEECCC-----------CCCCCccccCCCCCCCCceEEEEE
Confidence 23467999987654 444566788876 778977 9999966 8899999998865443
No 12
>PRK14279 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=1.4e-32 Score=264.79 Aligned_cols=192 Identities=29% Similarity=0.415 Sum_probs=144.5
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHhhhhhccccCCccccccccccCcccc----ccC-
Q 023217 15 RRDPYEVLCVSRDSSDQEIKTAYRKLALKYHPDKNVSNPEAAELFKEVAYSYSILSDPEKRRHYDNAGFEAI----DAE- 89 (285)
Q Consensus 15 ~~d~Y~iLgv~~~as~~eIk~ayrklal~~HPDk~~~~~~a~~~f~~i~~AY~vLsdp~~R~~YD~~G~~~~----~~~- 89 (285)
.+|||+||||+++|+.+|||+|||+||++||||+|++++.|.++|++|++||+|||||++|+.||++|+.+. ...
T Consensus 8 ~~Dyy~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vLsD~~KR~~YD~~G~~~~~~g~~~~~ 87 (392)
T PRK14279 8 EKDFYKELGVSSDASAEEIKKAYRKLARELHPDANPGDPAAEERFKAVSEAHDVLSDPAKRKEYDETRRLFAGGGFGGRR 87 (392)
T ss_pred ccCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHhcchhhhhHHHHhhhhcccccccccc
Confidence 579999999999999999999999999999999999888999999999999999999999999999986422 110
Q ss_pred -----C-ccc-------cccccc---------cccHHHHHHHhhcc-----------CCCCceeeechhhHHHHhCCcee
Q 023217 90 -----G-MDM-------EIDLSN---------LGTVNTMFAALFSK-----------LGVPIKTTISANVLEEALNGTVT 136 (285)
Q Consensus 90 -----~-~~~-------~~d~~~---------~g~~~~~F~~~F~~-----------~G~~i~~~i~~~~Lee~y~G~~~ 136 (285)
+ .++ ..|+.. .+.+.++|..||++ .|.++...+.+ +||++|+|.++
T Consensus 88 ~~~~~~~~g~~~~~~~~~~d~~~~f~~~~~~~~~~f~d~f~~~fg~~~~~~~~~~~~~g~di~~~l~l-tLee~~~G~~~ 166 (392)
T PRK14279 88 FDGGGGFGGFGTGGDGAEFNLNDLFDAAGRGGGGGIGDLFGGLFNRGGGSARPSRPRRGNDLETETTL-DFVEAAKGVTM 166 (392)
T ss_pred ccCCCCCCCccccccccCcChhhhhcccccccccchhhhhhhhhcCCCcccccCCCCCCCCeEEEEEE-EHHHHhCCeEE
Confidence 0 000 011110 12245778888862 24578888888 69999999986
Q ss_pred Eeec--------CCCCcccc-ccccccccccceeEEEEEccceeEEEEEecCcccchhcccccccCcceeee-ecccccc
Q 023217 137 VRPL--------PIGTSVSG-KVEKQCAHFFGVTINDQQAEAGIVVRVTSTAQSKFKLLYFEQDTNGGYGLA-LQEDSEK 206 (285)
Q Consensus 137 ~~~l--------~~G~~~~~-k~~k~c~~c~G~~i~~~q~~~G~v~q~qs~~~~kfk~~~f~~~~cgG~g~~-~q~~s~c 206 (285)
...+ |.|++... .....|..|.|.++..... |++ +++++|.. |+|.|++ ...|..|
T Consensus 167 ~v~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~--g~~-~~~~~C~~-----------C~G~G~~i~~~C~~C 232 (392)
T PRK14279 167 PLRLTSPAPCTTCHGSGARPGTSPKVCPTCNGSGVISRNQ--GAF-GFSEPCTD-----------CRGTGSIIEDPCEEC 232 (392)
T ss_pred EEeeeccccCCCCccccccCCCCCCCCCCCcceEEEEEEe--cce-EEEEecCC-----------CCceeEEeCCcCCCC
Confidence 5543 66777643 2346799999987766554 555 56788977 9999966 8999999
Q ss_pred CCceeccc--ceEeeee
Q 023217 207 TGKVTSAG--MYFLHFQ 221 (285)
Q Consensus 207 ~~~~t~~~--~~~~~~~ 221 (285)
.|+.+..+ ...+..|
T Consensus 233 ~G~g~v~~~~~~~V~Ip 249 (392)
T PRK14279 233 KGTGVTTRTRTINVRIP 249 (392)
T ss_pred CCCeEEEEeeeeEEEeC
Confidence 99876543 3444444
No 13
>PRK14301 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=3.4e-32 Score=260.71 Aligned_cols=192 Identities=31% Similarity=0.459 Sum_probs=147.2
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHhhhhhccccCCccccccccccCccccccCCcccc
Q 023217 15 RRDPYEVLCVSRDSSDQEIKTAYRKLALKYHPDKNVSNPEAAELFKEVAYSYSILSDPEKRRHYDNAGFEAIDAEGMDME 94 (285)
Q Consensus 15 ~~d~Y~iLgv~~~as~~eIk~ayrklal~~HPDk~~~~~~a~~~f~~i~~AY~vLsdp~~R~~YD~~G~~~~~~~~~~~~ 94 (285)
.+|||+||||+++||.+|||+|||+||++||||+++++++|+++|++|++||+||+||.+|+.||.+|.+++...+...+
T Consensus 3 ~~~~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~g~~g~~~~~~~~g 82 (373)
T PRK14301 3 QRDYYEVLGVSRDASEDEIKKAYRKLALQYHPDRNPDNPEAEQKFKEAAEAYEVLRDAEKRARYDRFGHAGVNGNGGFGG 82 (373)
T ss_pred CCChHHhcCCCCCCCHHHHHHHHHHHHHHhCCCcCCCChHHHHHHHHHHHHHHHhcchhhhhhhhhccccccccCCCCCC
Confidence 47999999999999999999999999999999999988889999999999999999999999999999887643211111
Q ss_pred c-cc-cccccHHHHHHHhhcc------------CCCCceeeechhhHHHHhCCceeEeec--------CCCCcccc-ccc
Q 023217 95 I-DL-SNLGTVNTMFAALFSK------------LGVPIKTTISANVLEEALNGTVTVRPL--------PIGTSVSG-KVE 151 (285)
Q Consensus 95 ~-d~-~~~g~~~~~F~~~F~~------------~G~~i~~~i~~~~Lee~y~G~~~~~~l--------~~G~~~~~-k~~ 151 (285)
+ +. ..+..+.++|+.+|+. .|.++...+.+ +||++|+|.++...+ |.|++... ...
T Consensus 83 ~~~~~~~~~~f~d~f~~~fg~g~~~~~~~~~~~~g~di~~~l~v-tLee~~~G~~k~i~~~r~~~C~~C~G~G~~~~~~~ 161 (373)
T PRK14301 83 FSSAEDIFSHFSDIFGDLFGFSGGGSRRGPRPQAGSDLRYNLTV-SFRQAAKGDEVTLRIPKNVTCDDCGGSGAAPGTSP 161 (373)
T ss_pred cccccccccchHHHHHHHhhccCcccccCCCCCCCCCEEEEEec-cHHHHhCCceEEEEeeecccCCCCCCcccCCCCCC
Confidence 1 11 1123456888888861 24577788888 699999998765433 56766532 334
Q ss_pred cccccccceeEEEEEccceeEEEEEecCcccchhcccccccCcceeee-eccccccCCceecccc--eEeeee
Q 023217 152 KQCAHFFGVTINDQQAEAGIVVRVTSTAQSKFKLLYFEQDTNGGYGLA-LQEDSEKTGKVTSAGM--YFLHFQ 221 (285)
Q Consensus 152 k~c~~c~G~~i~~~q~~~G~v~q~qs~~~~kfk~~~f~~~~cgG~g~~-~q~~s~c~~~~t~~~~--~~~~~~ 221 (285)
..|..|.|.+...++. |+++ ++++|.. |+|.|+. .+.|..|.|+.+..+. ..+..|
T Consensus 162 ~~C~~C~G~G~v~~~~--G~~~-~~~~C~~-----------C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip 220 (373)
T PRK14301 162 ETCRHCGGSGQVRQSQ--GFFQ-IAVPCPV-----------CRGEGRVITHPCPKCKGSGIVQQTRELKVRIP 220 (373)
T ss_pred cccCCccCeeEEEEEe--eeEE-EEEeCCC-----------CCceeeecCCCCCCCCCCceeccceEEEEEeC
Confidence 6799999987766553 6654 5889987 9999966 8899999998865544 344444
No 14
>PRK14297 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=3.3e-32 Score=261.41 Aligned_cols=192 Identities=35% Similarity=0.524 Sum_probs=146.8
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHhhhhhccccCCccccccccccCccccccCCc---
Q 023217 15 RRDPYEVLCVSRDSSDQEIKTAYRKLALKYHPDKNVSNPEAAELFKEVAYSYSILSDPEKRRHYDNAGFEAIDAEGM--- 91 (285)
Q Consensus 15 ~~d~Y~iLgv~~~as~~eIk~ayrklal~~HPDk~~~~~~a~~~f~~i~~AY~vLsdp~~R~~YD~~G~~~~~~~~~--- 91 (285)
.+|||+||||+++|+.+|||+|||+||++||||+++++++|+++|++|++||+||+||.+|+.||++|++++...+.
T Consensus 3 ~~d~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~G~~~~~~~~~~~~ 82 (380)
T PRK14297 3 SKDYYEVLGLEKGASDDEIKKAFRKLAIKYHPDKNKGNKEAEEKFKEINEAYQVLSDPQKKAQYDQFGTADFNGAGGFGS 82 (380)
T ss_pred CCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHhcCHhhhCchhhcCcccccccCCCCC
Confidence 46999999999999999999999999999999999888889999999999999999999999999999887642110
Q ss_pred -cc-cccccccccHHHHHHHhhcc-------------CCCCceeeechhhHHHHhCCceeEeec--------CCCCccc-
Q 023217 92 -DM-EIDLSNLGTVNTMFAALFSK-------------LGVPIKTTISANVLEEALNGTVTVRPL--------PIGTSVS- 147 (285)
Q Consensus 92 -~~-~~d~~~~g~~~~~F~~~F~~-------------~G~~i~~~i~~~~Lee~y~G~~~~~~l--------~~G~~~~- 147 (285)
++ .++++.++++.++|..||++ .|.++...+.+ +||++|+|.++...+ |.|++..
T Consensus 83 ~~~~~~~~~~~~~~~d~f~~~fgg~~g~~~~~~~~~~kg~di~~~l~v-sLee~~~G~~~~i~~~r~~~C~~C~G~G~~~ 161 (380)
T PRK14297 83 GGFGGFDFSDMGGFGDIFDSFFGGGFGSSSRRRNGPQRGADIEYTINL-TFEEAVFGVEKEISVTRNENCETCNGTGAKP 161 (380)
T ss_pred CCCCCcCcccccchhHHHHHHhccCccccccccCCCCCCCCEEEEEEE-EHHHhcCCeEEEEEeeeeccCCCcccccccC
Confidence 00 01111123467899999973 23477788888 699999998765433 5676663
Q ss_pred cccccccccccceeE--EEEEccceeEEEEEecCcccchhcccccccCcceeee-eccccccCCceecccceEee
Q 023217 148 GKVEKQCAHFFGVTI--NDQQAEAGIVVRVTSTAQSKFKLLYFEQDTNGGYGLA-LQEDSEKTGKVTSAGMYFLH 219 (285)
Q Consensus 148 ~k~~k~c~~c~G~~i--~~~q~~~G~v~q~qs~~~~kfk~~~f~~~~cgG~g~~-~q~~s~c~~~~t~~~~~~~~ 219 (285)
+.....|..|.|.++ ..++..+|+++ ++++|.. |+|.|+. .+.|..|.++.+..+...+-
T Consensus 162 ~~~~~~C~~C~G~G~~~~~~~~~~G~~~-~~~~C~~-----------C~G~G~~~~~~C~~C~G~g~v~~~~~i~ 224 (380)
T PRK14297 162 GTSPKTCDKCGGTGQIRVQRNTPLGSFV-STTTCDK-----------CGGSGKVIEDPCNKCHGKGKVRKNRKIK 224 (380)
T ss_pred CCcCccCCCccCeEEEEEEEEcCCceeE-EEEeCCC-----------CCCCceEcCCCCCCCCCCeEEEeEeEEE
Confidence 223467999987754 44556677655 5788877 9999966 88999999987544443333
No 15
>PRK14282 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=2.3e-32 Score=261.50 Aligned_cols=194 Identities=27% Similarity=0.436 Sum_probs=145.2
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCc-hHHHHHHHhhhhhccccCCccccccccccCccccccC--C-
Q 023217 15 RRDPYEVLCVSRDSSDQEIKTAYRKLALKYHPDKNVSN-PEAAELFKEVAYSYSILSDPEKRRHYDNAGFEAIDAE--G- 90 (285)
Q Consensus 15 ~~d~Y~iLgv~~~as~~eIk~ayrklal~~HPDk~~~~-~~a~~~f~~i~~AY~vLsdp~~R~~YD~~G~~~~~~~--~- 90 (285)
.+|||+||||+++||.+|||+|||+||++||||+|+++ ++|+++|++|++||+||+||.+|+.||++|.+++... +
T Consensus 3 ~~d~y~~lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~g~~~~~~~~~~~ 82 (369)
T PRK14282 3 KKDYYEILGVSRNATQEEIKRAYKRLVKEWHPDRHPENRKEAEQKFKEIQEAYEVLSDPQKRAMYDRFGYVGEQPPYQET 82 (369)
T ss_pred CCChHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCccchhHHHHHHHHHHHHHHHhcChhhHHHHhhcCccccccccccC
Confidence 47999999999999999999999999999999999864 6789999999999999999999999999998765321 0
Q ss_pred -ccccc-c--cccccc-H-HHHHHHhhcc------------CCCCceeeechhhHHHHhCCceeEeec--------CCCC
Q 023217 91 -MDMEI-D--LSNLGT-V-NTMFAALFSK------------LGVPIKTTISANVLEEALNGTVTVRPL--------PIGT 144 (285)
Q Consensus 91 -~~~~~-d--~~~~g~-~-~~~F~~~F~~------------~G~~i~~~i~~~~Lee~y~G~~~~~~l--------~~G~ 144 (285)
....+ + +..+.. + .++|..||++ .|.++...+.+ +|+++|+|.++...+ |.|+
T Consensus 83 ~~~g~~~~~~~~~~~~~~~~d~f~~~fgg~~~~~~~~~~~~~g~di~~~l~~-slee~~~G~~~~i~~~r~~~C~~C~G~ 161 (369)
T PRK14282 83 ESGGGFFEDIFKDFENIFNRDIFDIFFGERRTQEEQREYARRGEDIRYEIEV-TLSDLINGAEIPVEYDRYETCPHCGGT 161 (369)
T ss_pred CCCCcccccccccccccccchhhhHhhcccCCcccccCCCCCCCCeEEEEEE-EHHHhcCCeEEEEEeeecccCCCCCcc
Confidence 00000 0 111111 1 3788888863 23467788888 699999998765432 5677
Q ss_pred cccc-ccccccccccce--eEEEEEccceeEEEEEecCcccchhcccccccCcceeee-eccccccCCceecccc--eEe
Q 023217 145 SVSG-KVEKQCAHFFGV--TINDQQAEAGIVVRVTSTAQSKFKLLYFEQDTNGGYGLA-LQEDSEKTGKVTSAGM--YFL 218 (285)
Q Consensus 145 ~~~~-k~~k~c~~c~G~--~i~~~q~~~G~v~q~qs~~~~kfk~~~f~~~~cgG~g~~-~q~~s~c~~~~t~~~~--~~~ 218 (285)
+... ...+.|..|.|. .+..++..+|++++ +++|.. |+|.|++ .+.|+.|.|+.+.... ..+
T Consensus 162 G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~-~~~C~~-----------C~G~G~~~~~~C~~C~G~g~v~~~~~l~V 229 (369)
T PRK14282 162 GVEPGSGYVTCPKCHGTGRIREERRSFFGVFVS-ERTCER-----------CGGTGKIPGEYCHECGGSGRIRRRVRTTV 229 (369)
T ss_pred CCCCCCCCcCCCCCCCcCEEEEEEEccCcceEE-EEECCC-----------CCCcceeCCCCCCCCCCceeEEEEEEEEE
Confidence 7633 234679999866 44556678898775 668977 9999976 8899999998765443 444
Q ss_pred eee
Q 023217 219 HFQ 221 (285)
Q Consensus 219 ~~~ 221 (285)
..|
T Consensus 230 ~Ip 232 (369)
T PRK14282 230 KIP 232 (369)
T ss_pred EeC
Confidence 444
No 16
>PRK14287 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=2.7e-32 Score=261.25 Aligned_cols=184 Identities=33% Similarity=0.466 Sum_probs=143.6
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHhhhhhccccCCccccccccccCccccccCCcccc
Q 023217 15 RRDPYEVLCVSRDSSDQEIKTAYRKLALKYHPDKNVSNPEAAELFKEVAYSYSILSDPEKRRHYDNAGFEAIDAEGMDME 94 (285)
Q Consensus 15 ~~d~Y~iLgv~~~as~~eIk~ayrklal~~HPDk~~~~~~a~~~f~~i~~AY~vLsdp~~R~~YD~~G~~~~~~~~~~~~ 94 (285)
.+|||+||||+++||.+|||+|||+||++||||+|+ +++|+++|++|++||+||+||.+|+.||++|++++.......
T Consensus 3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~-~~~~~~~f~~i~~Ay~~L~d~~kR~~YD~~G~~~~~~~~~~~- 80 (371)
T PRK14287 3 KRDYYEVLGVDRNASVDEVKKAYRKLARKYHPDVNK-APDAEDKFKEVKEAYDTLSDPQKKAHYDQFGHTDPNQGFGGG- 80 (371)
T ss_pred CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCC-ChhHHHHHHHHHHHHHHhCcHhHHHHHHhhCCcccccccCCC-
Confidence 469999999999999999999999999999999997 478899999999999999999999999999987764211000
Q ss_pred ccccccccHHHHHHHhhcc-----------CCCCceeeechhhHHHHhCCceeEeec--------CCCCcccc-cccccc
Q 023217 95 IDLSNLGTVNTMFAALFSK-----------LGVPIKTTISANVLEEALNGTVTVRPL--------PIGTSVSG-KVEKQC 154 (285)
Q Consensus 95 ~d~~~~g~~~~~F~~~F~~-----------~G~~i~~~i~~~~Lee~y~G~~~~~~l--------~~G~~~~~-k~~k~c 154 (285)
...++++++++|..||++ .|.++...+.+ +|+++|+|.++...+ |.|++... .....|
T Consensus 81 -~~~~f~~~~d~f~~~fgg~~~~~~~~~~~~g~d~~~~l~v-slee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C 158 (371)
T PRK14287 81 -GAGDFGGFSDIFDMFFGGGGGRRNPNAPRQGADLQYTMTL-EFKEAVFGKETEIEIPREETCGTCHGSGAKPGTKPETC 158 (371)
T ss_pred -CCccccchHHHHHhhhccccCCCCCCCCCCCCCEEEEEEE-EHHHhcCCeEEEEEEeeeccCCCCCCcccCCCCCCccc
Confidence 111233467899999973 24577788888 699999998764433 66776632 234679
Q ss_pred ccccceeE--EEEEccceeEEEEEecCcccchhcccccccCcceeee-eccccccCCceeccc
Q 023217 155 AHFFGVTI--NDQQAEAGIVVRVTSTAQSKFKLLYFEQDTNGGYGLA-LQEDSEKTGKVTSAG 214 (285)
Q Consensus 155 ~~c~G~~i--~~~q~~~G~v~q~qs~~~~kfk~~~f~~~~cgG~g~~-~q~~s~c~~~~t~~~ 214 (285)
..|.|.++ ..++..+|++++ +++|.. |+|.|++ ...|..|.++.+..+
T Consensus 159 ~~C~G~G~~~~~~~~~~G~~~~-~~~C~~-----------C~G~G~~~~~~C~~C~G~g~v~~ 209 (371)
T PRK14287 159 SHCGGSGQLNVEQNTPFGRVVN-RRVCHH-----------CEGTGKIIKQKCATCGGKGKVRK 209 (371)
T ss_pred CCCCCEEEEEEEEecCCceEEE-EEeCCC-----------CCCCCccccccCCCCCCeeEEee
Confidence 99987654 455667788876 678877 9999966 889999998875443
No 17
>PRK14277 chaperone protein DnaJ; Provisional
Probab=99.98 E-value=4.5e-32 Score=260.90 Aligned_cols=187 Identities=32% Similarity=0.503 Sum_probs=142.8
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHhhhhhccccCCccccccccccCccccccCCcc--
Q 023217 15 RRDPYEVLCVSRDSSDQEIKTAYRKLALKYHPDKNVSNPEAAELFKEVAYSYSILSDPEKRRHYDNAGFEAIDAEGMD-- 92 (285)
Q Consensus 15 ~~d~Y~iLgv~~~as~~eIk~ayrklal~~HPDk~~~~~~a~~~f~~i~~AY~vLsdp~~R~~YD~~G~~~~~~~~~~-- 92 (285)
.+|||+||||+++||.+|||+|||+||++||||++++++.|+++|++|++||+||+||.+|+.||.+|.+++...+..
T Consensus 4 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~G~~~~~~~~~~~~ 83 (386)
T PRK14277 4 KKDYYEILGVDRNATEEEIKKAYRRLAKKYHPDLNPGDKEAEQKFKEINEAYEILSDPQKRAQYDQFGHAAFDPGGFGQG 83 (386)
T ss_pred CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCchHHHHHHHHHHHHHHHhCCHHHHHHHHhhccccccccccccC
Confidence 469999999999999999999999999999999999888899999999999999999999999999998776421110
Q ss_pred ----cc-----ccccccccHHHHHHHhhcc--------------CCCCceeeechhhHHHHhCCceeEeec--------C
Q 023217 93 ----ME-----IDLSNLGTVNTMFAALFSK--------------LGVPIKTTISANVLEEALNGTVTVRPL--------P 141 (285)
Q Consensus 93 ----~~-----~d~~~~g~~~~~F~~~F~~--------------~G~~i~~~i~~~~Lee~y~G~~~~~~l--------~ 141 (285)
.. +++ .++.+.++|..||+. .|.++...+.+ +||++|+|......+ |
T Consensus 84 ~~~~~g~~~~~~~~-~~~~~~d~f~~~F~~~fgg~~~~~~~~~~kg~di~~~l~v-tLee~~~G~~~~v~~~r~~~C~~C 161 (386)
T PRK14277 84 GFGQGGFGGGGFDF-DFGGFGDIFEDIFGDFFGTGRRRAETGPQKGADIRYDLEL-TFEEAAFGTEKEIEVERFEKCDVC 161 (386)
T ss_pred CcCCCCccccCccc-cccchhHHHHHhhcccccCCCcCCCCCCCCCCCEEEEEEE-EHHHHhCCeEEEEEEEeeccCCCC
Confidence 00 010 012344566666542 24567778888 699999998765443 5
Q ss_pred CCCcccc-ccccccccccceeE--EEEEccceeEEEEEecCcccchhcccccccCcceeee-eccccccCCceecccc
Q 023217 142 IGTSVSG-KVEKQCAHFFGVTI--NDQQAEAGIVVRVTSTAQSKFKLLYFEQDTNGGYGLA-LQEDSEKTGKVTSAGM 215 (285)
Q Consensus 142 ~G~~~~~-k~~k~c~~c~G~~i--~~~q~~~G~v~q~qs~~~~kfk~~~f~~~~cgG~g~~-~q~~s~c~~~~t~~~~ 215 (285)
.|++... .....|..|.|.++ ..++..+|++++. ++|.. |+|.|+. .+.|+.|.|+.+..+.
T Consensus 162 ~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~-~~C~~-----------C~G~G~~~~~~C~~C~G~g~v~~~ 227 (386)
T PRK14277 162 KGSGAKPGSKPVTCPVCHGTGQVRTRQNTPFGRIVNI-RTCDR-----------CHGEGKIITDPCNKCGGTGRIRRR 227 (386)
T ss_pred CCCCcCCCCCCccCCCCCCEEEEEEEEeccCceEEEE-EECCC-----------CCcceeeccCCCCCCCCCcEEeee
Confidence 6766632 23467999987644 5556778988876 58877 9999966 8999999998865443
No 18
>PRK10767 chaperone protein DnaJ; Provisional
Probab=99.98 E-value=7.2e-32 Score=258.25 Aligned_cols=190 Identities=34% Similarity=0.505 Sum_probs=146.1
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHhhhhhccccCCccccccccccCccccccCCcccc
Q 023217 15 RRDPYEVLCVSRDSSDQEIKTAYRKLALKYHPDKNVSNPEAAELFKEVAYSYSILSDPEKRRHYDNAGFEAIDAEGMDME 94 (285)
Q Consensus 15 ~~d~Y~iLgv~~~as~~eIk~ayrklal~~HPDk~~~~~~a~~~f~~i~~AY~vLsdp~~R~~YD~~G~~~~~~~~~~~~ 94 (285)
.+|||+||||+++||.+|||+|||+||++||||++++++.|.++|++|++||++|+||.+|+.||.+|.+++...+....
T Consensus 3 ~~d~y~iLgv~~~as~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~~~~ 82 (371)
T PRK10767 3 KRDYYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGDKEAEEKFKEIKEAYEVLSDPQKRAAYDQYGHAAFEQGGGGGG 82 (371)
T ss_pred CCChHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCcHHHHHHHHHHHHHHHHhcchhhhhHhhhccccccccCCCCCC
Confidence 47999999999999999999999999999999999877889999999999999999999999999999877643211000
Q ss_pred c-ccccccc-HHHHHHHhhcc----------CCCCceeeechhhHHHHhCCceeEeec--------CCCCcccc-ccccc
Q 023217 95 I-DLSNLGT-VNTMFAALFSK----------LGVPIKTTISANVLEEALNGTVTVRPL--------PIGTSVSG-KVEKQ 153 (285)
Q Consensus 95 ~-d~~~~g~-~~~~F~~~F~~----------~G~~i~~~i~~~~Lee~y~G~~~~~~l--------~~G~~~~~-k~~k~ 153 (285)
+ ..+++.+ +.++|..||++ .|.++...+.+ +||++|+|.+....+ |.|++... .....
T Consensus 83 ~~~~~~~~~~f~~~f~~~fgg~~~~~~~~~~~g~di~~~l~v-sLee~~~G~~~~v~~~r~~~C~~C~G~G~~~~~~~~~ 161 (371)
T PRK10767 83 FGGGGGFGDIFGDIFGDIFGGGRGGGRQRARRGADLRYNMEI-TLEEAVRGVTKEIRIPTLVTCDTCHGSGAKPGTSPKT 161 (371)
T ss_pred CCCccccccchhhhhhhhccCCccccCCCCCCCCCeEEEEEe-ehHHhhCCeeEEEeeeecccCCCCCCcccCCCCCCcc
Confidence 0 0112222 56788888863 35678888888 699999998765433 55666532 23457
Q ss_pred cccccceeEEEEEccceeEEEEEecCcccchhcccccccCcceeee-eccccccCCceecccceEee
Q 023217 154 CAHFFGVTINDQQAEAGIVVRVTSTAQSKFKLLYFEQDTNGGYGLA-LQEDSEKTGKVTSAGMYFLH 219 (285)
Q Consensus 154 c~~c~G~~i~~~q~~~G~v~q~qs~~~~kfk~~~f~~~~cgG~g~~-~q~~s~c~~~~t~~~~~~~~ 219 (285)
|..|.|.++..... |+++ ++++|.. |+|.|+. .+.|+.|.|+.+....-.+.
T Consensus 162 C~~C~G~G~~~~~~--g~~~-~~~~C~~-----------C~G~G~~~~~~C~~C~G~g~v~~~~~l~ 214 (371)
T PRK10767 162 CPTCHGAGQVRMQQ--GFFT-VQQTCPT-----------CHGRGKIIKDPCKKCHGQGRVEKEKTLS 214 (371)
T ss_pred CCCCCCeeEEEEee--ceEE-EEEeCCC-----------CCCceeECCCCCCCCCCCceEeeeeeEE
Confidence 99999987765554 7774 7789987 9999966 89999999988655443333
No 19
>PRK14290 chaperone protein DnaJ; Provisional
Probab=99.98 E-value=1.1e-31 Score=256.54 Aligned_cols=189 Identities=30% Similarity=0.451 Sum_probs=147.0
Q ss_pred CCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCch-HHHHHHHhhhhhccccCCccccccccccCccccccCCcccc
Q 023217 16 RDPYEVLCVSRDSSDQEIKTAYRKLALKYHPDKNVSNP-EAAELFKEVAYSYSILSDPEKRRHYDNAGFEAIDAEGMDME 94 (285)
Q Consensus 16 ~d~Y~iLgv~~~as~~eIk~ayrklal~~HPDk~~~~~-~a~~~f~~i~~AY~vLsdp~~R~~YD~~G~~~~~~~~~~~~ 94 (285)
+|||+||||+++||.+|||+|||+||++||||++++++ .|.++|++|++||+||+||.+|+.||.+|+.++...+.+..
T Consensus 3 ~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~G~~~~~~~~~~~~ 82 (365)
T PRK14290 3 KDYYKILGVDRNASQEDIKKAFRELAKKWHPDLHPGNKAEAEEKFKEISEAYEVLSDPQKRRQYDQTGTVDFGAGGSNFN 82 (365)
T ss_pred CChhhhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHHHHHHHHHHHHHHHhcChhhhhhhcccCCcccccCCCCcc
Confidence 69999999999999999999999999999999998764 78999999999999999999999999999876642111111
Q ss_pred -ccccccccHHHHHHHhhccC------------------CCCceeeechhhHHHHhCCceeEee--------cCCCCccc
Q 023217 95 -IDLSNLGTVNTMFAALFSKL------------------GVPIKTTISANVLEEALNGTVTVRP--------LPIGTSVS 147 (285)
Q Consensus 95 -~d~~~~g~~~~~F~~~F~~~------------------G~~i~~~i~~~~Lee~y~G~~~~~~--------l~~G~~~~ 147 (285)
.++..++++.++|..||++. +.++...+.+ +|+++|+|..+... .|.|++..
T Consensus 83 ~~~~~~~~~~~d~f~~~fg~~~~~~~~~~~~~~~~~~~~~~di~~~l~l-sLee~~~G~~~~i~~~r~~~C~~C~G~g~~ 161 (365)
T PRK14290 83 WDNFTHFSDINDIFNQIFGGNFGSDFFSGFGNQQSTRNIDLDIYTNLDI-SLEDAYYGTEKRIKYRRNAMCPDCSGTGAK 161 (365)
T ss_pred ccccccccchhHHHHHHhcCccccccccccccccCCCCCCCCEEEEEEe-cHHHhcCCEEEEEEeeecccCCCCccccCC
Confidence 01112345678888888731 3467777888 69999999876443 36677664
Q ss_pred cccccccccccceeEEEEEccceeEE-EEEecCcccchhcccccccCcceeee-eccccccCCceecccce
Q 023217 148 GKVEKQCAHFFGVTINDQQAEAGIVV-RVTSTAQSKFKLLYFEQDTNGGYGLA-LQEDSEKTGKVTSAGMY 216 (285)
Q Consensus 148 ~k~~k~c~~c~G~~i~~~q~~~G~v~-q~qs~~~~kfk~~~f~~~~cgG~g~~-~q~~s~c~~~~t~~~~~ 216 (285)
......|..|.|.++......+|+++ +++.+|.. |+|.|.. .+.|+.|.|+.+..+..
T Consensus 162 ~~~~~~C~~C~G~G~~~~~~~~g~~~~~~~~~C~~-----------C~G~G~~~~~~C~~C~G~g~v~~~~ 221 (365)
T PRK14290 162 NGKLITCPTCHGTGQQRIVRGQGFFRMVTVTTCRT-----------CGGRGRIPEEKCPRCNGTGTVVVNE 221 (365)
T ss_pred CCCCccCCCCCCcCEEEEEeccCeEEEEEEEeCCC-----------CCCceeEccCCCCCCCCceeEEEee
Confidence 43456799999887766666788764 56788877 9999966 89999999998654443
No 20
>PRK14278 chaperone protein DnaJ; Provisional
Probab=99.97 E-value=1.2e-31 Score=257.23 Aligned_cols=191 Identities=32% Similarity=0.400 Sum_probs=143.6
Q ss_pred CCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHhhhhhccccCCccccccccccCccccccCCccccc
Q 023217 16 RDPYEVLCVSRDSSDQEIKTAYRKLALKYHPDKNVSNPEAAELFKEVAYSYSILSDPEKRRHYDNAGFEAIDAEGMDMEI 95 (285)
Q Consensus 16 ~d~Y~iLgv~~~as~~eIk~ayrklal~~HPDk~~~~~~a~~~f~~i~~AY~vLsdp~~R~~YD~~G~~~~~~~~~~~~~ 95 (285)
+|||+||||+++|+.+|||+|||+||++||||+|+ +++|+++|++|++||+||+||.+|+.||++|.+.....+....+
T Consensus 3 ~d~y~iLgv~~~a~~~eik~ayr~la~~~hpD~~~-~~~a~~~f~~i~~Ay~vL~d~~~r~~YD~~G~~~~~~~~~~~g~ 81 (378)
T PRK14278 3 RDYYGLLGVSRNASDAEIKRAYRKLARELHPDVNP-DEEAQEKFKEISVAYEVLSDPEKRRIVDLGGDPLESAGGGGGGF 81 (378)
T ss_pred CCcceecCCCCCCCHHHHHHHHHHHHHHHCCCCCC-cHHHHHHHHHHHHHHHHhchhhhhhhhhccCCccccccCCCCCC
Confidence 69999999999999999999999999999999998 67899999999999999999999999999997633211100001
Q ss_pred cccccccHHHHHHHhhcc------------CCCCceeeechhhHHHHhCCceeEeec--------CCCCcccc-cccccc
Q 023217 96 DLSNLGTVNTMFAALFSK------------LGVPIKTTISANVLEEALNGTVTVRPL--------PIGTSVSG-KVEKQC 154 (285)
Q Consensus 96 d~~~~g~~~~~F~~~F~~------------~G~~i~~~i~~~~Lee~y~G~~~~~~l--------~~G~~~~~-k~~k~c 154 (285)
. .++++++++|..||++ .|.++...+.+ +||++|+|.+....+ |.|++... ....+|
T Consensus 82 ~-~~f~~~~d~f~~ffgg~g~~~~~~~~~~~g~d~~~~l~v-tLee~~~G~~~~i~~~~~~~C~~C~G~G~~~~~~~~~C 159 (378)
T PRK14278 82 G-GGFGGLGDVFEAFFGGGAASRGPRGRVRPGSDSLLRMRL-DLEECATGVTKQVTVDTAVLCDRCHGKGTAGDSKPVTC 159 (378)
T ss_pred C-cCcCchhHHHHHHhCCCCCCCCCccCCCCCCCeEEEEEE-EHHHhcCCeEEEEEEEeeccCCCCcCccCCCCCCceec
Confidence 1 1234467899999973 23467777888 699999998765433 66777633 234679
Q ss_pred ccccceeE--EEEEccceeEEEEEecCcccchhcccccccCcceeee-eccccccCCceecccc--eEeeee
Q 023217 155 AHFFGVTI--NDQQAEAGIVVRVTSTAQSKFKLLYFEQDTNGGYGLA-LQEDSEKTGKVTSAGM--YFLHFQ 221 (285)
Q Consensus 155 ~~c~G~~i--~~~q~~~G~v~q~qs~~~~kfk~~~f~~~~cgG~g~~-~q~~s~c~~~~t~~~~--~~~~~~ 221 (285)
..|.|.+. ..++..+|++++ +++|.. |+|.|+. .+.|+.|.|+.+..+. ..+..|
T Consensus 160 ~~C~G~G~~~~~~~~~~g~~~~-~~~C~~-----------C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip 219 (378)
T PRK14278 160 DTCGGRGEVQTVQRSFLGQVMT-SRPCPT-----------CRGVGEVIPDPCHECAGDGRVRARREITVKIP 219 (378)
T ss_pred CCccCceEEEEEEeccceeEEE-EEECCC-----------CCccceeeCCCCCCCCCceeEecceEEEEEEC
Confidence 99987654 444455677764 568877 9999966 8899999998764443 344444
No 21
>PRK14280 chaperone protein DnaJ; Provisional
Probab=99.97 E-value=8.9e-32 Score=258.07 Aligned_cols=186 Identities=32% Similarity=0.435 Sum_probs=143.2
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHhhhhhccccCCccccccccccCccccccCCcccc
Q 023217 15 RRDPYEVLCVSRDSSDQEIKTAYRKLALKYHPDKNVSNPEAAELFKEVAYSYSILSDPEKRRHYDNAGFEAIDAEGMDME 94 (285)
Q Consensus 15 ~~d~Y~iLgv~~~as~~eIk~ayrklal~~HPDk~~~~~~a~~~f~~i~~AY~vLsdp~~R~~YD~~G~~~~~~~~~~~~ 94 (285)
.+|||+||||+++|+.+|||+|||+||++||||+|+ ++.|+++|++|++||+||+||.+|+.||++|++++..+.....
T Consensus 3 ~~~~y~iLgv~~~a~~~eik~ayr~la~~~HpD~~~-~~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~G~~~~~~~~~~~~ 81 (376)
T PRK14280 3 KRDYYEVLGVSKSASKDEIKKAYRKLSKKYHPDINK-EEGADEKFKEISEAYEVLSDDQKRAQYDQFGHAGPNQGFGGGG 81 (376)
T ss_pred CCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCC-CccHHHHHHHHHHHHHHhccHhHHHHHHhcCccccccCcCCCC
Confidence 369999999999999999999999999999999997 4778999999999999999999999999999887643210000
Q ss_pred ---cccc-ccccHHHHHHHhhcc-----------CCCCceeeechhhHHHHhCCceeEeec--------CCCCcccc-cc
Q 023217 95 ---IDLS-NLGTVNTMFAALFSK-----------LGVPIKTTISANVLEEALNGTVTVRPL--------PIGTSVSG-KV 150 (285)
Q Consensus 95 ---~d~~-~~g~~~~~F~~~F~~-----------~G~~i~~~i~~~~Lee~y~G~~~~~~l--------~~G~~~~~-k~ 150 (285)
.++. ++ .++++|..||++ .|.++...+.+ +||++|+|.++...+ |.|++... ..
T Consensus 82 ~~~~~~~~~~-~~~d~f~~~fgg~~~~~~~~~~~kg~di~~~l~v-tLee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~ 159 (376)
T PRK14280 82 FGGGDFGGGF-GFEDIFSSFFGGGGRRRDPNAPRQGADLQYTMTL-TFEEAVFGKEKEIEIPKEETCDTCHGSGAKPGTS 159 (376)
T ss_pred CCCCCccccc-cchhhHHHHhCCccccCcccccccccCEEEEEEE-EHHHHhCCceeEEEEeeeccCCCCCCcccCCCCC
Confidence 0111 11 356899999963 24577788888 699999998764433 56777633 23
Q ss_pred ccccccccceeE--EEEEccceeEEEEEecCcccchhcccccccCcceeee-eccccccCCceecccc
Q 023217 151 EKQCAHFFGVTI--NDQQAEAGIVVRVTSTAQSKFKLLYFEQDTNGGYGLA-LQEDSEKTGKVTSAGM 215 (285)
Q Consensus 151 ~k~c~~c~G~~i--~~~q~~~G~v~q~qs~~~~kfk~~~f~~~~cgG~g~~-~q~~s~c~~~~t~~~~ 215 (285)
...|..|.|.++ ..++..+|+++ ++++|.. |+|.|+. .+.|..|.|+.+..+.
T Consensus 160 ~~~C~~C~G~G~~~~~~~~~~g~~~-~~~~C~~-----------C~G~G~~~~~~C~~C~G~g~v~~~ 215 (376)
T PRK14280 160 KETCSHCGGSGQVSVEQNTPFGRVV-NRQTCPH-----------CNGTGQEIKEKCPTCHGKGKVRKR 215 (376)
T ss_pred CccCCCCCCEEEEEEEeecCCceEE-EEEEcCC-----------CCCCCceecCCCCCCCCceEEEEE
Confidence 467999987754 44456678876 5778977 9999966 7889999998865443
No 22
>PRK14295 chaperone protein DnaJ; Provisional
Probab=99.97 E-value=1.9e-31 Score=256.81 Aligned_cols=186 Identities=30% Similarity=0.491 Sum_probs=142.9
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHhhhhhccccCCccccccccc----cCccccccC-
Q 023217 15 RRDPYEVLCVSRDSSDQEIKTAYRKLALKYHPDKNVSNPEAAELFKEVAYSYSILSDPEKRRHYDN----AGFEAIDAE- 89 (285)
Q Consensus 15 ~~d~Y~iLgv~~~as~~eIk~ayrklal~~HPDk~~~~~~a~~~f~~i~~AY~vLsdp~~R~~YD~----~G~~~~~~~- 89 (285)
.+|||+||||+++||.+|||+|||+||++||||++++++.|+++|++|++||+||+||.+|+.||+ +|++++...
T Consensus 8 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~~~~~G~~g~~~~~ 87 (389)
T PRK14295 8 EKDYYKVLGVPKDATEAEIKKAYRKLAREYHPDANKGDAKAEERFKEISEAYDVLSDEKKRKEYDEARSLFGNGGFRPGP 87 (389)
T ss_pred ccCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCchhHHHHHHHHHHHHHHHCchhhHHHHHHHHhhhcccccccCC
Confidence 579999999999999999999999999999999998778899999999999999999999999998 898766421
Q ss_pred --C--ccccccccc-------------c-ccHHHHHHHhhcc--------CCCCceeeechhhHHHHhCCceeEeec---
Q 023217 90 --G--MDMEIDLSN-------------L-GTVNTMFAALFSK--------LGVPIKTTISANVLEEALNGTVTVRPL--- 140 (285)
Q Consensus 90 --~--~~~~~d~~~-------------~-g~~~~~F~~~F~~--------~G~~i~~~i~~~~Lee~y~G~~~~~~l--- 140 (285)
+ .++.++..+ + +.+.++|..||++ .|.++...+.+ +||++|+|..+...+
T Consensus 88 ~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~f~d~f~~~fg~~~~~~~~~~g~di~~~l~l-sLee~~~G~~k~i~~~r~ 166 (389)
T PRK14295 88 GGGGGGGFNFDLGDLFGGGAQGGGGAGGGGGLGDVFGGLFNRGGRRTQPRRGADVESEVTL-SFTEAIDGATVPLRLTSQ 166 (389)
T ss_pred CCCCCCCCCcccccccccccccccccccccchhhhhcccccCCCCCCCCCCCCCEEEEEEE-EHHHHhCCceEEEEeecc
Confidence 0 001111000 0 1245677777763 35678888888 699999998765543
Q ss_pred -----CCCCcccc-ccccccccccceeEEEEEccceeEEEEEecCcccchhcccccccCcceeee-eccccccCCceecc
Q 023217 141 -----PIGTSVSG-KVEKQCAHFFGVTINDQQAEAGIVVRVTSTAQSKFKLLYFEQDTNGGYGLA-LQEDSEKTGKVTSA 213 (285)
Q Consensus 141 -----~~G~~~~~-k~~k~c~~c~G~~i~~~q~~~G~v~q~qs~~~~kfk~~~f~~~~cgG~g~~-~q~~s~c~~~~t~~ 213 (285)
|.|++... .....|..|.|.++..... |++ +++++|.. |+|.|+. .+.|..|.|+.+..
T Consensus 167 ~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~--g~~-~~~~~C~~-----------C~G~G~~~~~~C~~C~G~g~~~ 232 (389)
T PRK14295 167 APCPACSGTGAKNGTTPRVCPTCSGTGQVSRNS--GGF-SLSEPCPD-----------CKGRGLIADDPCLVCKGSGRAK 232 (389)
T ss_pred ccCCCCcccccCCCCCCcCCCCCCCEeEEEEEe--cce-EEEEecCC-----------CcceeEEeccCCCCCCCCceEe
Confidence 66777633 3346799999987766655 444 46778977 9999966 89999999988654
Q ss_pred cc
Q 023217 214 GM 215 (285)
Q Consensus 214 ~~ 215 (285)
+.
T Consensus 233 ~~ 234 (389)
T PRK14295 233 SS 234 (389)
T ss_pred ee
Confidence 44
No 23
>TIGR02349 DnaJ_bact chaperone protein DnaJ. This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.
Probab=99.97 E-value=3.7e-31 Score=251.82 Aligned_cols=185 Identities=35% Similarity=0.514 Sum_probs=143.7
Q ss_pred CccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHhhhhhccccCCccccccccccCccccccCCc--c--
Q 023217 17 DPYEVLCVSRDSSDQEIKTAYRKLALKYHPDKNVSNPEAAELFKEVAYSYSILSDPEKRRHYDNAGFEAIDAEGM--D-- 92 (285)
Q Consensus 17 d~Y~iLgv~~~as~~eIk~ayrklal~~HPDk~~~~~~a~~~f~~i~~AY~vLsdp~~R~~YD~~G~~~~~~~~~--~-- 92 (285)
|||+||||+++|+.+|||+|||+||++||||+++ ++.|.++|++|++||+||+||.+|+.||.+|.+++..... .
T Consensus 1 d~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~-~~~~~~~f~~i~~Ay~vL~d~~~R~~yd~~g~~~~~~~~~~~~~~ 79 (354)
T TIGR02349 1 DYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNK-DKEAEEKFKEINEAYEVLSDPEKRAQYDQFGHAGFNGGGGGGGGG 79 (354)
T ss_pred ChHHhCCCCCCCCHHHHHHHHHHHHHHHCCCCCC-CccHHHHHHHHHHHHHHhhChHHHHhhhhcccccccccCcCCCCC
Confidence 7999999999999999999999999999999997 5778899999999999999999999999999887643111 0
Q ss_pred c-cccccccccHHHHHHHhhcc-------------CCCCceeeechhhHHHHhCCceeEeec--------CCCCcccc-c
Q 023217 93 M-EIDLSNLGTVNTMFAALFSK-------------LGVPIKTTISANVLEEALNGTVTVRPL--------PIGTSVSG-K 149 (285)
Q Consensus 93 ~-~~d~~~~g~~~~~F~~~F~~-------------~G~~i~~~i~~~~Lee~y~G~~~~~~l--------~~G~~~~~-k 149 (285)
. ..+.+++..+.++|..||++ .|.++...+.+ +||++|+|.++...+ |.|++... .
T Consensus 80 ~~~~~~~~~~~~~~~f~~~fg~~~g~~~~~~~~~~~~~d~~~~l~v-sLee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~ 158 (354)
T TIGR02349 80 FNGFDIGFFGDFGDIFGDFFGGGGGSGRRRRSGPRRGEDLRYDLEL-TFEEAVFGVEKEIEIPRKESCETCHGTGAKPGT 158 (354)
T ss_pred cCCccccCcCchhhhHHHHhccCcccCccccCCCCCCCCeEEEEEE-EHHHHhCCeeEEEEeecCCcCCCCCCCCCCCCC
Confidence 0 01111344577899999973 23467788888 699999998765533 56766533 2
Q ss_pred cccccccccceeE--EEEEccceeEEEEEecCcccchhcccccccCcceeee-eccccccCCceecccc
Q 023217 150 VEKQCAHFFGVTI--NDQQAEAGIVVRVTSTAQSKFKLLYFEQDTNGGYGLA-LQEDSEKTGKVTSAGM 215 (285)
Q Consensus 150 ~~k~c~~c~G~~i--~~~q~~~G~v~q~qs~~~~kfk~~~f~~~~cgG~g~~-~q~~s~c~~~~t~~~~ 215 (285)
....|..|.|.++ ..++.++|++++ +++|.. |+|.|+. ...|..|.|+.+..+.
T Consensus 159 ~~~~C~~C~G~G~~~~~~~~~~g~~~~-~~~C~~-----------C~G~G~~~~~~C~~C~G~g~v~~~ 215 (354)
T TIGR02349 159 DPKTCPTCGGTGQVRRQQGTPFGFFQQ-QQTCPT-----------CGGEGKIIKEPCSTCKGKGRVKER 215 (354)
T ss_pred CCccCCCCCCeeEEEEEEeccCCceEE-EEecCC-----------CCCcceecCCCCCCCCCCcEeccc
Confidence 2467999987655 445567788876 679977 9999966 7899999998864443
No 24
>PRK14284 chaperone protein DnaJ; Provisional
Probab=99.97 E-value=2.3e-31 Score=256.40 Aligned_cols=191 Identities=34% Similarity=0.454 Sum_probs=143.6
Q ss_pred CCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHhhhhhccccCCccccccccccCccccccC-C--cc
Q 023217 16 RDPYEVLCVSRDSSDQEIKTAYRKLALKYHPDKNVSNPEAAELFKEVAYSYSILSDPEKRRHYDNAGFEAIDAE-G--MD 92 (285)
Q Consensus 16 ~d~Y~iLgv~~~as~~eIk~ayrklal~~HPDk~~~~~~a~~~f~~i~~AY~vLsdp~~R~~YD~~G~~~~~~~-~--~~ 92 (285)
.|||+||||+++||.+|||+|||+||++||||+|++++.|+++|++|++||+||+||++|+.||++|.+++..+ + ..
T Consensus 1 ~d~y~iLgv~~~a~~~eikkayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g~~~g~~~~~~ 80 (391)
T PRK14284 1 MDYYTILGVSKTASPEEIKKAYRKLAVKYHPDKNPGDAEAEKRFKEVSEAYEVLSDAQKRESYDRYGKDGPFAGAGGFGG 80 (391)
T ss_pred CCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHhcCHHHHHHHHhccccccccccCCcCC
Confidence 38999999999999999999999999999999999888899999999999999999999999999998765221 0 00
Q ss_pred ccc-c-----------ccc-cccHHHHHHHhhcc---------------CCCCceeeechhhHHHHhCCceeEeec----
Q 023217 93 MEI-D-----------LSN-LGTVNTMFAALFSK---------------LGVPIKTTISANVLEEALNGTVTVRPL---- 140 (285)
Q Consensus 93 ~~~-d-----------~~~-~g~~~~~F~~~F~~---------------~G~~i~~~i~~~~Lee~y~G~~~~~~l---- 140 (285)
..+ + +++ ++...++|..||++ .|.++...+.+ +||++|+|.++...+
T Consensus 81 ~g~~~~~~~~~~~~~~f~~~~~~~~d~f~~~fgg~g~~~~~~~~~~~~~~g~d~~~~l~v-slee~~~G~~~~i~~~r~~ 159 (391)
T PRK14284 81 AGMGNMEDALRTFMGAFGGEFGGGGSFFEGLFGGLGEAFGMRGGPAGARQGASKKVHITL-SFEEAAKGVEKELLVSGYK 159 (391)
T ss_pred CCcCcccchhhhccccccccccccccchhhhccCccccccccccCCCcCCCCCeEEEEEE-EHHHHhCCeeEEEEEeeec
Confidence 000 0 000 11124678777763 23467778888 699999999865543
Q ss_pred ----CCCCcccc-ccccccccccceeEEEEEccceeEEEEEecCcccchhcccccccCcceeee-eccccccCCceeccc
Q 023217 141 ----PIGTSVSG-KVEKQCAHFFGVTINDQQAEAGIVVRVTSTAQSKFKLLYFEQDTNGGYGLA-LQEDSEKTGKVTSAG 214 (285)
Q Consensus 141 ----~~G~~~~~-k~~k~c~~c~G~~i~~~q~~~G~v~q~qs~~~~kfk~~~f~~~~cgG~g~~-~q~~s~c~~~~t~~~ 214 (285)
|.|++... ...+.|..|.|.++..++. |+++ ++++|.. |+|.|++ ...|..|.|+.+..+
T Consensus 160 ~C~~C~G~G~~~~~~~~~C~~C~G~G~v~~~~--G~~~-~~~~C~~-----------C~G~G~~~~~~C~~C~G~g~v~~ 225 (391)
T PRK14284 160 SCDACSGSGANSSQGIKVCDRCKGSGQVVQSR--GFFS-MASTCPE-----------CGGEGRVITDPCSVCRGQGRIKD 225 (391)
T ss_pred cCCCCcccccCCCCCCeecCccCCeeEEEEEe--ceEE-EEEECCC-----------CCCCCcccCCcCCCCCCcceecc
Confidence 56777643 2346799999987766655 6654 7789987 9999966 788999999875433
Q ss_pred --ceEeeee
Q 023217 215 --MYFLHFQ 221 (285)
Q Consensus 215 --~~~~~~~ 221 (285)
...+..|
T Consensus 226 ~~~l~V~Ip 234 (391)
T PRK14284 226 KRSVHVHIP 234 (391)
T ss_pred eEEEEEEEC
Confidence 3444444
No 25
>PRK14281 chaperone protein DnaJ; Provisional
Probab=99.97 E-value=7.7e-31 Score=253.20 Aligned_cols=192 Identities=33% Similarity=0.468 Sum_probs=142.9
Q ss_pred CCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHhhhhhccccCCccccccccccCccccccCC---cc
Q 023217 16 RDPYEVLCVSRDSSDQEIKTAYRKLALKYHPDKNVSNPEAAELFKEVAYSYSILSDPEKRRHYDNAGFEAIDAEG---MD 92 (285)
Q Consensus 16 ~d~Y~iLgv~~~as~~eIk~ayrklal~~HPDk~~~~~~a~~~f~~i~~AY~vLsdp~~R~~YD~~G~~~~~~~~---~~ 92 (285)
+|||+||||+++|+.+|||+|||+||++||||++++++.|+++|++|++||+||+||.+|+.||.+|.+++.... ..
T Consensus 3 ~d~y~iLgv~~~a~~~eikkayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~g~~~~~~~~~~~~~ 82 (397)
T PRK14281 3 RDYYEVLGVSRSADKDEIKKAYRKLALKYHPDKNPDNKEAEEHFKEVNEAYEVLSNDDKRRRYDQFGHAGVGSSAASGGG 82 (397)
T ss_pred CChhhhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCchHHHHHHHHHHHHHHHhhhhhhhhhhhhccchhhccccccCCC
Confidence 699999999999999999999999999999999988788999999999999999999999999999987764210 00
Q ss_pred ccccccccccHHHHH---HHhhcc-----------------------------CCCCceeeechhhHHHHhCCceeEeec
Q 023217 93 MEIDLSNLGTVNTMF---AALFSK-----------------------------LGVPIKTTISANVLEEALNGTVTVRPL 140 (285)
Q Consensus 93 ~~~d~~~~g~~~~~F---~~~F~~-----------------------------~G~~i~~~i~~~~Lee~y~G~~~~~~l 140 (285)
..+.. +...++++| ..||++ .|.++...+.+ +||++|+|.++...+
T Consensus 83 ~~~~~-~~~~~~d~f~~f~~~Fgg~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~di~~~l~v-tLee~~~G~~~~i~~ 160 (397)
T PRK14281 83 PGYGG-GGGDFNDIFSAFNDMFGGGARRGGGSPFGFEDVFGGGGRRRRASAGIPGTDLKIRLKL-TLEEIAKGVEKTLKI 160 (397)
T ss_pred CCCCc-CCCCHHHHHHHHHHHhCCCcccccccccccccccCCCcccccccCCCCCCCEEEEEEe-EHHHHhCCeEEEEEE
Confidence 00000 011234444 466642 13467777888 699999998765433
Q ss_pred --------CCCCccccccccccccccceeE--EEEEccceeEEEEEecCcccchhcccccccCcceeee-eccccccCCc
Q 023217 141 --------PIGTSVSGKVEKQCAHFFGVTI--NDQQAEAGIVVRVTSTAQSKFKLLYFEQDTNGGYGLA-LQEDSEKTGK 209 (285)
Q Consensus 141 --------~~G~~~~~k~~k~c~~c~G~~i--~~~q~~~G~v~q~qs~~~~kfk~~~f~~~~cgG~g~~-~q~~s~c~~~ 209 (285)
|.|++......+.|..|.|.++ ..++...|++++ +++|.. |+|.|++ ...|..|.|+
T Consensus 161 ~r~~~C~~C~G~G~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~-~~~C~~-----------C~G~G~~~~~~C~~C~G~ 228 (397)
T PRK14281 161 KKQVPCKECNGTGSKTGATETCPTCHGSGEVRQASKTMFGQFVN-ITACPT-----------CGGEGRVVKDRCPACYGE 228 (397)
T ss_pred EeeecCCCCCCcccCCCCCccCCCCCCCcEEEEEEecccceEEE-EEecCC-----------CcceeeeeCCCCCCCCCC
Confidence 6677764434567999987644 445566787765 668877 9999966 8899999998
Q ss_pred eeccc--ceEeeee
Q 023217 210 VTSAG--MYFLHFQ 221 (285)
Q Consensus 210 ~t~~~--~~~~~~~ 221 (285)
.+... ...+..|
T Consensus 229 g~v~~~~~~~V~Ip 242 (397)
T PRK14281 229 GIKQGEVTVKVTVP 242 (397)
T ss_pred ccEecceEEEEecC
Confidence 86544 3444455
No 26
>PRK14291 chaperone protein DnaJ; Provisional
Probab=99.97 E-value=1e-30 Score=251.13 Aligned_cols=191 Identities=36% Similarity=0.516 Sum_probs=141.4
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHhhhhhccccCCccccccccccCccccccCCccc-
Q 023217 15 RRDPYEVLCVSRDSSDQEIKTAYRKLALKYHPDKNVSNPEAAELFKEVAYSYSILSDPEKRRHYDNAGFEAIDAEGMDM- 93 (285)
Q Consensus 15 ~~d~Y~iLgv~~~as~~eIk~ayrklal~~HPDk~~~~~~a~~~f~~i~~AY~vLsdp~~R~~YD~~G~~~~~~~~~~~- 93 (285)
.+|||+||||+++|+.+|||+|||+||++||||+|++ +.|.++|++|++||+||+||.+|+.||++|..++...+...
T Consensus 2 ~~d~Y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~-~~~~~~f~~i~~Ay~vLsd~~kR~~YD~~g~~~~~~~~~~~~ 80 (382)
T PRK14291 2 KKDYYEILGVSRNATQEEIKKAYRRLARKYHPDFNKN-PEAEEKFKEINEAYQVLSDPEKRKLYDQFGHAAFSGSGQQQQ 80 (382)
T ss_pred CCCHHHhhCCCCCCCHHHHHHHHHHHHHHHCCCCCCC-ccHHHHHHHHHHHHHHhcCHHHHHHHhhhcccccccccCccc
Confidence 4699999999999999999999999999999999984 78899999999999999999999999999987664221100
Q ss_pred -ccccc--ccccHHHHHHHhh---------cc---------------CCCCceeeechhhHHHHhCCceeEeec------
Q 023217 94 -EIDLS--NLGTVNTMFAALF---------SK---------------LGVPIKTTISANVLEEALNGTVTVRPL------ 140 (285)
Q Consensus 94 -~~d~~--~~g~~~~~F~~~F---------~~---------------~G~~i~~~i~~~~Lee~y~G~~~~~~l------ 140 (285)
...++ ...+++++|..|| ++ .|.++...+.+ +|+++|+|..+...+
T Consensus 81 ~~~~~~~~~~~~~~d~f~~~f~~fg~~~~fg~~~~~~~~~~~~~~~~~g~di~~~l~v-sLee~~~G~~~~i~~~r~~~C 159 (382)
T PRK14291 81 GQEGFSDFGGGNIEDILEDVFDIFGFGDIFGRRRATRERRKTYQRPVKGEDIYQTVEI-SLEEAYTGTTVSLEVPRYVPC 159 (382)
T ss_pred cccccccccCCCHHHHHHHHHHhccccccccccccccccccccccccCCCCEEEEEEE-EHHHhhCCEEEEEEEeeeccC
Confidence 00111 1123455665552 21 23467777888 699999998764433
Q ss_pred --CCCCcccc-ccccccccccceeEEEEEccceeEEEEEecCcccchhcccccccCcceeeeeccccccCCceeccc--c
Q 023217 141 --PIGTSVSG-KVEKQCAHFFGVTINDQQAEAGIVVRVTSTAQSKFKLLYFEQDTNGGYGLALQEDSEKTGKVTSAG--M 215 (285)
Q Consensus 141 --~~G~~~~~-k~~k~c~~c~G~~i~~~q~~~G~v~q~qs~~~~kfk~~~f~~~~cgG~g~~~q~~s~c~~~~t~~~--~ 215 (285)
|.|++... .....|..|.|.++..+. +++++++++|.. |+|.|.+...|+.|.|+.+..+ .
T Consensus 160 ~~C~G~G~~~~~~~~~C~~C~G~G~~~~~---~g~~~~~~~C~~-----------C~G~G~~~~~C~~C~G~g~v~~~~~ 225 (382)
T PRK14291 160 EACGGTGYDPGSGEKVCPTCGGSGEIYQR---GGFFRISQTCPT-----------CGGEGVLREPCSKCNGRGLVIKKET 225 (382)
T ss_pred CCCccccCCCCCCCccCCCCCCceEEEEe---cceEEEEecCCC-----------CCCceEEccCCCCCCCCceEEeeeE
Confidence 56766532 334679999998776555 345677889987 9999988999999999875333 3
Q ss_pred eEeeee
Q 023217 216 YFLHFQ 221 (285)
Q Consensus 216 ~~~~~~ 221 (285)
..+..|
T Consensus 226 l~V~Ip 231 (382)
T PRK14291 226 IKVRIP 231 (382)
T ss_pred EEEEeC
Confidence 444444
No 27
>PRK14283 chaperone protein DnaJ; Provisional
Probab=99.97 E-value=1.4e-30 Score=249.89 Aligned_cols=192 Identities=33% Similarity=0.466 Sum_probs=142.6
Q ss_pred CCCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHhhhhhccccCCccccccccccCccccccCCc-c
Q 023217 14 IRRDPYEVLCVSRDSSDQEIKTAYRKLALKYHPDKNVSNPEAAELFKEVAYSYSILSDPEKRRHYDNAGFEAIDAEGM-D 92 (285)
Q Consensus 14 ~~~d~Y~iLgv~~~as~~eIk~ayrklal~~HPDk~~~~~~a~~~f~~i~~AY~vLsdp~~R~~YD~~G~~~~~~~~~-~ 92 (285)
..+|||+||||+++||.+|||+|||+||++||||+|+ ++.|.++|++|++||+||+||.+|++||++|++++...+. +
T Consensus 3 ~~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~-~~~a~~~f~~i~~Ay~~Lsd~~kR~~YD~~G~~g~~~~~~~~ 81 (378)
T PRK14283 3 EKRDYYEVLGVDRNADKKEIKKAYRKLARKYHPDVSE-EEGAEEKFKEISEAYAVLSDDEKRQRYDQFGHAGMDGFSQED 81 (378)
T ss_pred CcCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCC-CccHHHHHHHHHHHHHHhchhHHHHHHhhhcccccccccccc
Confidence 3579999999999999999999999999999999998 4789999999999999999999999999999876542110 0
Q ss_pred --cccc----ccccc-cHHHHHHHh-hcc-------CCCCceeeechhhHHHHhCCceeEee--------cCCCCccc-c
Q 023217 93 --MEID----LSNLG-TVNTMFAAL-FSK-------LGVPIKTTISANVLEEALNGTVTVRP--------LPIGTSVS-G 148 (285)
Q Consensus 93 --~~~d----~~~~g-~~~~~F~~~-F~~-------~G~~i~~~i~~~~Lee~y~G~~~~~~--------l~~G~~~~-~ 148 (285)
...+ +..++ .+.++|..+ |++ .|.++...+.+ +|+++|+|.++... .|.|++.. .
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~f~~~~fgg~~~~~~~kg~di~~~l~v-sLed~~~G~~~~i~~~r~~~C~~C~G~G~~~~ 160 (378)
T PRK14283 82 IFNNINFEDIFQGFGFGIGNIFDMFGFGGGSRHGPQRGADIYTEVEI-TLEEAASGVEKDIKVRHTKKCPVCNGSRAEPG 160 (378)
T ss_pred cccccCccccccccccchhhhccccccCCCCCCCccCCCCeEEEeee-eHHHHhCCcceEEEeeeeccCCCCCccccCCC
Confidence 0001 11111 234566655 542 35678888888 69999999875443 25676653 2
Q ss_pred ccccccccccceeE--EEEEccceeEEEEEecCcccchhcccccccCcceeee-eccccccCCceecccceEee
Q 023217 149 KVEKQCAHFFGVTI--NDQQAEAGIVVRVTSTAQSKFKLLYFEQDTNGGYGLA-LQEDSEKTGKVTSAGMYFLH 219 (285)
Q Consensus 149 k~~k~c~~c~G~~i--~~~q~~~G~v~q~qs~~~~kfk~~~f~~~~cgG~g~~-~q~~s~c~~~~t~~~~~~~~ 219 (285)
.....|..|.|.++ ..++..+|++++ +++|.. |+|.|+. ...|..|.|+.+..+.-.+.
T Consensus 161 ~~~~~C~~C~G~G~~~~~~~~~~g~~~~-~~~C~~-----------C~G~G~~~~~~C~~C~G~g~v~~~~~l~ 222 (378)
T PRK14283 161 SEVKTCPTCGGTGQVKQVRNTILGQMMN-VTTCPD-----------CQGEGKIVEKPCSNCHGKGVVRETKTIS 222 (378)
T ss_pred CCCccCCCcCCccEEEEEEeccCceEEE-EEECCC-----------CCccceecCCCCCCCCCceeeccceeEE
Confidence 33467999987655 445566788764 468877 9999966 89999999988655544443
No 28
>PRK14300 chaperone protein DnaJ; Provisional
Probab=99.96 E-value=1.8e-29 Score=241.78 Aligned_cols=190 Identities=25% Similarity=0.391 Sum_probs=141.0
Q ss_pred CCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHhhhhhccccCCccccccccccCccccccC---C-c
Q 023217 16 RDPYEVLCVSRDSSDQEIKTAYRKLALKYHPDKNVSNPEAAELFKEVAYSYSILSDPEKRRHYDNAGFEAIDAE---G-M 91 (285)
Q Consensus 16 ~d~Y~iLgv~~~as~~eIk~ayrklal~~HPDk~~~~~~a~~~f~~i~~AY~vLsdp~~R~~YD~~G~~~~~~~---~-~ 91 (285)
+|||+||||+++||.+|||+|||+||++||||+++ ++.|+++|++|++||++|+||.+|+.||++|.+++... + .
T Consensus 3 ~~~y~iLgv~~~as~~eik~ayr~la~~~HPD~~~-~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~~~~~ 81 (372)
T PRK14300 3 QDYYQILGVSKTASQADLKKAYLKLAKQYHPDTTD-AKDAEKKFKEINAAYDVLKDEQKRAAYDRFGHDAFQNQQSRGGG 81 (372)
T ss_pred CChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCC-CcCHHHHHHHHHHHHHHhhhHhHhhHHHhccccccccccccCCC
Confidence 69999999999999999999999999999999997 56788999999999999999999999999998776421 1 0
Q ss_pred ccccccc-cc-ccHHHHHHHhhcc-----------CCCCceeeechhhHHHHhCCceeEeec--------CCCCcccc-c
Q 023217 92 DMEIDLS-NL-GTVNTMFAALFSK-----------LGVPIKTTISANVLEEALNGTVTVRPL--------PIGTSVSG-K 149 (285)
Q Consensus 92 ~~~~d~~-~~-g~~~~~F~~~F~~-----------~G~~i~~~i~~~~Lee~y~G~~~~~~l--------~~G~~~~~-k 149 (285)
+...++. ++ ..+.++|..+|++ .|.++...+.+ +|+++|+|.++...+ |.|++... .
T Consensus 82 g~~~~~~~~~~~~f~~~f~~~~gg~~~~~~~~~~~~g~di~~~l~~-sLee~~~G~~k~i~~~r~~~C~~C~G~g~~~~~ 160 (372)
T PRK14300 82 GNHGGFHPDINDIFGDFFSDFMGGSRRSRPTSSKVRGSDLKYNLTI-NLEEAFHGIEKNISFSSEVKCDTCHGSGSEKGE 160 (372)
T ss_pred CCCCccccchhhhHHHHHHhhcCCCCCCCCCcCCCCCCCeeEEEEE-EHHHHhCCceEEEEeeeccccCCCCCcccCCCC
Confidence 0000111 11 1234556555542 23467777888 699999998764433 56776632 3
Q ss_pred cccccccccceeEEEEEccceeEEEEEecCcccchhcccccccCcceeee-eccccccCCceeccc--ceEeeee
Q 023217 150 VEKQCAHFFGVTINDQQAEAGIVVRVTSTAQSKFKLLYFEQDTNGGYGLA-LQEDSEKTGKVTSAG--MYFLHFQ 221 (285)
Q Consensus 150 ~~k~c~~c~G~~i~~~q~~~G~v~q~qs~~~~kfk~~~f~~~~cgG~g~~-~q~~s~c~~~~t~~~--~~~~~~~ 221 (285)
....|..|.|.+....+ .|+++ ++++|.. |.|.|.+ .+.|..|.|+.+..+ .+.+..|
T Consensus 161 ~~~~C~~C~G~G~~~~~--~g~~~-~~~~C~~-----------C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip 221 (372)
T PRK14300 161 TVTTCDACSGVGATRMQ--QGFFT-IEQACHK-----------CQGNGQIIKNPCKKCHGMGRYHKQRNLSVNIP 221 (372)
T ss_pred CCccCCCccCeEEEEEe--eceEE-EEEeCCC-----------CCccceEeCCCCCCCCCceEEEeeEEEEEEEC
Confidence 34679999998766553 47776 7779977 9999966 899999999886544 3444444
No 29
>PRK14289 chaperone protein DnaJ; Provisional
Probab=99.96 E-value=2.6e-29 Score=241.80 Aligned_cols=194 Identities=29% Similarity=0.413 Sum_probs=141.0
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHhhhhhccccCCccccccccccCccccccCCc--c
Q 023217 15 RRDPYEVLCVSRDSSDQEIKTAYRKLALKYHPDKNVSNPEAAELFKEVAYSYSILSDPEKRRHYDNAGFEAIDAEGM--D 92 (285)
Q Consensus 15 ~~d~Y~iLgv~~~as~~eIk~ayrklal~~HPDk~~~~~~a~~~f~~i~~AY~vLsdp~~R~~YD~~G~~~~~~~~~--~ 92 (285)
.+|||+||||+++|+.+|||+|||+||++||||+++++++|.++|++|++||++|+||.+|+.||.+|..+++.... +
T Consensus 4 ~~~~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~G~~~~~~~~~~~~ 83 (386)
T PRK14289 4 KRDYYEVLGVSKTATVDEIKKAYRKKAIQYHPDKNPGDKEAEEKFKEAAEAYDVLSDPDKRSRYDQFGHAGVGGAAGGGG 83 (386)
T ss_pred cCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCChHHHHHHHHHHHHHHHhcCHHHHHHHHHhcccccccCCCCCC
Confidence 47999999999999999999999999999999999988899999999999999999999999999999876542110 0
Q ss_pred c---cccccc-cccHHHHHHHhhcc-----------------CCCCceeeechhhHHHHhCCceeEee--------cCCC
Q 023217 93 M---EIDLSN-LGTVNTMFAALFSK-----------------LGVPIKTTISANVLEEALNGTVTVRP--------LPIG 143 (285)
Q Consensus 93 ~---~~d~~~-~g~~~~~F~~~F~~-----------------~G~~i~~~i~~~~Lee~y~G~~~~~~--------l~~G 143 (285)
. ..++.. +..+.++|+.+|++ .|.++...+.+ +||++|+|.+.... .|.|
T Consensus 84 ~~~~~~~~~~~f~~f~~~fg~~~gg~~~~~~~~~~~~~~~~~~g~di~~~l~v-sLee~~~G~~~~i~~~r~~~C~~C~G 162 (386)
T PRK14289 84 FSGEGMSMEDIFSMFGDIFGGHGGGFGGFGGFGGGGSQQRVFRGSDLRVKVKL-NLKEISTGVEKKFKVKKYVPCSHCHG 162 (386)
T ss_pred CCCCCcChhhhhHHhhhhhcccccCcccccccccccccCCCCCCCCeEEEEEE-EHHHhhCCeEEEEEEEeecccCCCCC
Confidence 0 011111 01112233332211 23467777888 69999999876443 2556
Q ss_pred Cccc-cccccccccccceeE--EEEEccceeEEEEEecCcccchhcccccccCcceeee-eccccccCCceecccc--eE
Q 023217 144 TSVS-GKVEKQCAHFFGVTI--NDQQAEAGIVVRVTSTAQSKFKLLYFEQDTNGGYGLA-LQEDSEKTGKVTSAGM--YF 217 (285)
Q Consensus 144 ~~~~-~k~~k~c~~c~G~~i--~~~q~~~G~v~q~qs~~~~kfk~~~f~~~~cgG~g~~-~q~~s~c~~~~t~~~~--~~ 217 (285)
++.. ......|..|.|.+. ..++..+|+++. +.+|.. |+|.|.. ...|..|.|+.+..+. ..
T Consensus 163 ~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~-~~~C~~-----------C~G~G~~~~~~C~~C~G~g~v~~~~~~~ 230 (386)
T PRK14289 163 TGAEGNNGSETCPTCKGSGSVTRVQNTILGTMQT-QSTCPT-----------CNGEGKIIKKKCKKCGGEGIVYGEEVIT 230 (386)
T ss_pred CCCCCCCCCCcCCCCcCeEEEEEEEecccceEEE-EEecCC-----------CCccccccCcCCCCCCCCcEEeeeEEEE
Confidence 6653 223467999987644 445566788865 888877 9999966 8899999999865544 44
Q ss_pred eeee
Q 023217 218 LHFQ 221 (285)
Q Consensus 218 ~~~~ 221 (285)
+..|
T Consensus 231 V~Ip 234 (386)
T PRK14289 231 VKIP 234 (386)
T ss_pred EEeC
Confidence 4444
No 30
>PRK14293 chaperone protein DnaJ; Provisional
Probab=99.96 E-value=5e-29 Score=238.94 Aligned_cols=183 Identities=29% Similarity=0.445 Sum_probs=139.5
Q ss_pred CCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHhhhhhccccCCccccccccccCccccccCCccccc
Q 023217 16 RDPYEVLCVSRDSSDQEIKTAYRKLALKYHPDKNVSNPEAAELFKEVAYSYSILSDPEKRRHYDNAGFEAIDAEGMDMEI 95 (285)
Q Consensus 16 ~d~Y~iLgv~~~as~~eIk~ayrklal~~HPDk~~~~~~a~~~f~~i~~AY~vLsdp~~R~~YD~~G~~~~~~~~~~~~~ 95 (285)
.|||+||||+++||.+|||+|||+||++||||+++ ++.|+++|++|++||+||+||.+|+.||.+|.+++.... ...
T Consensus 3 ~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~-~~~a~~~f~~i~~Ay~vL~~~~~R~~yd~~g~~g~~~~~-~~~- 79 (374)
T PRK14293 3 ADYYEILGVSRDADKDELKRAYRRLARKYHPDVNK-EPGAEDRFKEINRAYEVLSDPETRARYDQFGEAGVSGAA-GFP- 79 (374)
T ss_pred CChhhhcCCCCCCCHHHHHHHHHHHHHHHCCCCCC-CcCHHHHHHHHHHHHHHHhchHHHHHHhhccccccccCC-CcC-
Confidence 59999999999999999999999999999999997 467889999999999999999999999999987764211 100
Q ss_pred cccccccHHHHHHHhhcc-----------------CCCCceeeechhhHHHHhCCceeEee--------cCCCCcccc-c
Q 023217 96 DLSNLGTVNTMFAALFSK-----------------LGVPIKTTISANVLEEALNGTVTVRP--------LPIGTSVSG-K 149 (285)
Q Consensus 96 d~~~~g~~~~~F~~~F~~-----------------~G~~i~~~i~~~~Lee~y~G~~~~~~--------l~~G~~~~~-k 149 (285)
+..+++++.++|..||++ .+.++...+.+ +||++|+|.++... .|.|++... .
T Consensus 80 ~~~~~~~~~d~f~~~fg~~~~~~~~~~~~~~~~~~kg~di~~~l~v-sLee~~~G~~k~i~~~r~~~C~~C~G~G~~~~~ 158 (374)
T PRK14293 80 DMGDMGGFADIFETFFSGFGGAGGQGGRRRRRGPQRGDDLRYDLKL-DFREAIFGGEKEIRIPHLETCETCRGSGAKPGT 158 (374)
T ss_pred CcccccchHHHHHHHhcccCCCCCCCccccccCccCCCCeEEEEEe-eHHHHhCCceEEEEeeccccCCCCCCcCCCCCC
Confidence 111223456788888852 12356677778 69999999876443 255666532 2
Q ss_pred cccccccccceeEE--EEEccceeEEEEEecCcccchhcccccccCcceeee-eccccccCCceeccc
Q 023217 150 VEKQCAHFFGVTIN--DQQAEAGIVVRVTSTAQSKFKLLYFEQDTNGGYGLA-LQEDSEKTGKVTSAG 214 (285)
Q Consensus 150 ~~k~c~~c~G~~i~--~~q~~~G~v~q~qs~~~~kfk~~~f~~~~cgG~g~~-~q~~s~c~~~~t~~~ 214 (285)
....|..|.|.++. .++..+|++++ +++|.. |.|.|.. .+.|+.|.|+.+...
T Consensus 159 ~~~~C~~C~G~G~~~~~~~~~~g~~~~-~~~C~~-----------C~G~G~~~~~~C~~C~G~g~v~~ 214 (374)
T PRK14293 159 GPTTCSTCGGAGQVRRATRTPFGSFTQ-VSECPT-----------CNGTGQVIEDPCDACGGQGVKQV 214 (374)
T ss_pred CCeeCCCCCCcceEEEEEecCcceEEE-EeeCCC-----------CCcceeEeccCCCCCCCCccccc
Confidence 34579999877554 44556787775 578877 9999966 889999999875443
No 31
>PRK14292 chaperone protein DnaJ; Provisional
Probab=99.96 E-value=4.5e-28 Score=232.12 Aligned_cols=181 Identities=32% Similarity=0.406 Sum_probs=136.5
Q ss_pred CCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHhhhhhccccCCccccccccccCccccccCCccccc
Q 023217 16 RDPYEVLCVSRDSSDQEIKTAYRKLALKYHPDKNVSNPEAAELFKEVAYSYSILSDPEKRRHYDNAGFEAIDAEGMDMEI 95 (285)
Q Consensus 16 ~d~Y~iLgv~~~as~~eIk~ayrklal~~HPDk~~~~~~a~~~f~~i~~AY~vLsdp~~R~~YD~~G~~~~~~~~~~~~~ 95 (285)
.|||+||||+++||.+|||+|||+||++||||+++ ++.|.++|++|++||+||+||.+|+.||.+|.++....+...
T Consensus 2 ~d~y~~Lgv~~~a~~~~ik~ayr~l~~~~hpD~~~-~~~a~~~~~~i~~Ay~vL~d~~~r~~yd~~G~~~~~~~~~~~-- 78 (371)
T PRK14292 2 MDYYELLGVSRTASADEIKSAYRKLALKYHPDRNK-EKGAAEKFAQINEAYAVLSDAEKRAHYDRFGTAPGAGMPGGD-- 78 (371)
T ss_pred CChHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCC-ChhHHHHHHHHHHHHHHhcchhhhhhHhhcCCcccccccCCc--
Confidence 49999999999999999999999999999999997 578899999999999999999999999999987532110000
Q ss_pred ccccc-ccHHHHHHHhhccC-------------CCCceeeechhhHHHHhCCceeEee--------cCCCCcccc--ccc
Q 023217 96 DLSNL-GTVNTMFAALFSKL-------------GVPIKTTISANVLEEALNGTVTVRP--------LPIGTSVSG--KVE 151 (285)
Q Consensus 96 d~~~~-g~~~~~F~~~F~~~-------------G~~i~~~i~~~~Lee~y~G~~~~~~--------l~~G~~~~~--k~~ 151 (285)
.+.++ .++.++|..||++. |.++...+.+ +|+++|+|.+.... .|.|++... ...
T Consensus 79 ~~~~~~~d~~d~f~~~fg~~~~~~~~~~~~~~~g~d~~~~l~~-sLee~~~G~~~~v~~~r~~~C~~C~G~G~~~~~~~~ 157 (371)
T PRK14292 79 PFGGMGFDPMDIFEQLFGGAGFGGGRGRRGPARGDDLETEARI-TLEQARAGEEVEVEVDRLTECEHCHGSRTEPGGKPP 157 (371)
T ss_pred ccCccCCChHHHHHHhhCCCCcCCCCCcccccCCCCeEEEEec-cHHHHcCCeEEEEEEEeeecCCCCcccccCCCCCCC
Confidence 01111 13468899888742 2356777788 69999999875443 255666532 224
Q ss_pred cccccccceeEEE--EEccceeEEEEEecCcccchhcccccccCcceeee-eccccccCCceec
Q 023217 152 KQCAHFFGVTIND--QQAEAGIVVRVTSTAQSKFKLLYFEQDTNGGYGLA-LQEDSEKTGKVTS 212 (285)
Q Consensus 152 k~c~~c~G~~i~~--~q~~~G~v~q~qs~~~~kfk~~~f~~~~cgG~g~~-~q~~s~c~~~~t~ 212 (285)
..|..|.|.+... .+..+|++++ +++|.. |+|.|.+ ...|..|.|+.+.
T Consensus 158 ~~C~~C~G~G~~~~~~~~~~g~~~~-~~~C~~-----------C~G~G~~~~~~C~~C~G~g~v 209 (371)
T PRK14292 158 KTCPTCRGAGAVRAQARTIFGVVET-QQPCPT-----------CRGEGQIITDPCTVCRGRGRT 209 (371)
T ss_pred ccCCCCCCccEEEEEEeccCceEEE-eeecCC-----------CcccceecCCCCCCCCCceEE
Confidence 6799998765433 3345588765 778877 9999966 8999999988754
No 32
>PRK14299 chaperone protein DnaJ; Provisional
Probab=99.91 E-value=4.8e-24 Score=198.23 Aligned_cols=123 Identities=42% Similarity=0.641 Sum_probs=96.6
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHhhhhhccccCCccccccccccCccccccC--Cc-
Q 023217 15 RRDPYEVLCVSRDSSDQEIKTAYRKLALKYHPDKNVSNPEAAELFKEVAYSYSILSDPEKRRHYDNAGFEAIDAE--GM- 91 (285)
Q Consensus 15 ~~d~Y~iLgv~~~as~~eIk~ayrklal~~HPDk~~~~~~a~~~f~~i~~AY~vLsdp~~R~~YD~~G~~~~~~~--~~- 91 (285)
..|||+||||+++||.+|||+|||+||++||||+++ ++.|.++|++|++||+||+||.+|+.||.+|.++.... +.
T Consensus 3 ~~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~-~~~~~~~f~~i~~Ay~~L~d~~kr~~yD~~g~~~~~~~~~~~~ 81 (291)
T PRK14299 3 YKDYYAILGVPKNASQDEIKKAFKKLARKYHPDVNK-SPGAEEKFKEINEAYTVLSDPEKRRIYDTYGTTAASAGWQGPP 81 (291)
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCC-ChhHHHHHHHHHHHHHHhcCHHHHHHHHhcCCccccccccCCC
Confidence 469999999999999999999999999999999997 57899999999999999999999999999998754211 00
Q ss_pred ---cccccccc--cccHHHHHHHhhccC-------------------CCCceeeechhhHHHHhCCceeEee
Q 023217 92 ---DMEIDLSN--LGTVNTMFAALFSKL-------------------GVPIKTTISANVLEEALNGTVTVRP 139 (285)
Q Consensus 92 ---~~~~d~~~--~g~~~~~F~~~F~~~-------------------G~~i~~~i~~~~Lee~y~G~~~~~~ 139 (285)
....++++ +++++++|..||++. |.++...+.+ +|++++.|......
T Consensus 82 ~~~~~~~~~~~~~~~~~~d~f~~~fgg~~~~~~~g~~~~~~~~~~~~g~dl~~~l~i-sL~ea~~G~~~~i~ 152 (291)
T PRK14299 82 PGPPGGGDFSGFNVGDFSDFFQQLFGGRGGFGGFGDLFGSVGRRARKGRDLEAELPL-TLEEAYRGGEKVVE 152 (291)
T ss_pred CCCCCCCCccccCcCCHHHHHHHHhCCCCCCCCcccccccccCCCCCCCCEEEEEEe-cHHHHhCCCeEEEe
Confidence 00011111 245778999998741 2356677788 69999999876443
No 33
>PRK10266 curved DNA-binding protein CbpA; Provisional
Probab=99.85 E-value=8.3e-22 Score=184.42 Aligned_cols=121 Identities=31% Similarity=0.484 Sum_probs=94.0
Q ss_pred CCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHhhhhhccccCCccccccccccCcc----ccccCCc
Q 023217 16 RDPYEVLCVSRDSSDQEIKTAYRKLALKYHPDKNVSNPEAAELFKEVAYSYSILSDPEKRRHYDNAGFE----AIDAEGM 91 (285)
Q Consensus 16 ~d~Y~iLgv~~~as~~eIk~ayrklal~~HPDk~~~~~~a~~~f~~i~~AY~vLsdp~~R~~YD~~G~~----~~~~~~~ 91 (285)
+|||+||||+++||.+|||+|||+||++||||+++ ++.|.++|++|++||++|+||.+|+.||.+|.. ++.....
T Consensus 4 ~d~y~~Lgv~~~a~~~eik~ayr~la~k~HPD~~~-~~~~~~~f~~i~~Ay~~L~~~~kr~~yD~~g~~~~~~~~~~~~~ 82 (306)
T PRK10266 4 KDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSK-EPDAEARFKEVAEAWEVLSDEQRRAEYDQLWQHRNDPQFNRQFQ 82 (306)
T ss_pred CChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCC-CccHHHHHHHHHHHHHHhhhHHHHHHHHHhhccccCcccccccc
Confidence 69999999999999999999999999999999987 468999999999999999999999999998753 2211000
Q ss_pred cccccccccccHHHHHHHhhcc-----------CCCCceeeechhhHHHHhCCceeEe
Q 023217 92 DMEIDLSNLGTVNTMFAALFSK-----------LGVPIKTTISANVLEEALNGTVTVR 138 (285)
Q Consensus 92 ~~~~d~~~~g~~~~~F~~~F~~-----------~G~~i~~~i~~~~Lee~y~G~~~~~ 138 (285)
....+.....++.++|..+|++ .|.++...+.+ +|++++.|..+..
T Consensus 83 ~~~~~~~~~~~~~~~f~~~~g~~~~~~~~~~~~kg~di~~~v~i-sLee~~~G~~k~i 139 (306)
T PRK10266 83 HGDGQSFNAEDFDDIFSSIFGQHARQSRQRPAARGHDIEIEVAV-FLEETLTEHKRTI 139 (306)
T ss_pred cCCCCCCCCCCHHHHHHHHhCCCCCCCCCCCCCCCCceEEEEEE-EHHHhcCCceEEE
Confidence 0000001123567889998874 24577778888 6999999986533
No 34
>KOG0715 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.84 E-value=1.6e-21 Score=180.95 Aligned_cols=171 Identities=32% Similarity=0.431 Sum_probs=117.4
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHhhhhhccccCCccccccccccCccccccCCcccc
Q 023217 15 RRDPYEVLCVSRDSSDQEIKTAYRKLALKYHPDKNVSNPEAAELFKEVAYSYSILSDPEKRRHYDNAGFEAIDAEGMDME 94 (285)
Q Consensus 15 ~~d~Y~iLgv~~~as~~eIk~ayrklal~~HPDk~~~~~~a~~~f~~i~~AY~vLsdp~~R~~YD~~G~~~~~~~~~~~~ 94 (285)
..|||+||||+++|+..|||+||++||++||||.|.+ ++|.++|++|.+|||||+|+.+|+.||.+|..+.. +
T Consensus 42 ~~d~Y~vLgv~~~At~~EIK~Af~~LaKkyHPD~n~~-~~a~~kF~eI~~AYEiLsd~eKR~~YD~~~~~~~~----~-- 114 (288)
T KOG0715|consen 42 KEDYYKVLGVSRNATLSEIKSAFRKLAKKYHPDVNKD-KEASKKFKEISEAYEILSDEEKRQEYDVYGLEQHG----E-- 114 (288)
T ss_pred CcchhhhhCcCCCCCHHHHHHHHHHHHHhhCCCCCCC-cchhhHHHHHHHHHHHhcCHHHHHHHHHhhhhccc----c--
Confidence 3499999999999999999999999999999999985 59999999999999999999999999999876510 0
Q ss_pred ccccccccHHHHHHHhhcc-C-----CCCceeeechhhHHHHhCCceeEe--------ecCCCCcccc-ccccccccccc
Q 023217 95 IDLSNLGTVNTMFAALFSK-L-----GVPIKTTISANVLEEALNGTVTVR--------PLPIGTSVSG-KVEKQCAHFFG 159 (285)
Q Consensus 95 ~d~~~~g~~~~~F~~~F~~-~-----G~~i~~~i~~~~Lee~y~G~~~~~--------~l~~G~~~~~-k~~k~c~~c~G 159 (285)
..+...+.|..+|++ . +.++...... .++++-.|..... ..|.|.+... .....|..|.|
T Consensus 115 ----~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~f~~A~~g~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~ 189 (288)
T KOG0715|consen 115 ----FGGNPFDVFLEFFGGKMNKRVPDKDQYYDLSL-DFKEAVRGSKKRISFNVLSDCETCFGSGAEEGAKRESCKTCSG 189 (288)
T ss_pred ----ccCCccchHHHhhcccccccccCccccccccc-CHHHHhhccccceEEEeecccccccCcCcccccccccchhhhC
Confidence 011344667777766 2 2355555566 4788877773211 1244555422 22335888887
Q ss_pred eeEEEEEccceeEEEEEecCcccchhcccccccCcceeee-eccccccCCcee
Q 023217 160 VTINDQQAEAGIVVRVTSTAQSKFKLLYFEQDTNGGYGLA-LQEDSEKTGKVT 211 (285)
Q Consensus 160 ~~i~~~q~~~G~v~q~qs~~~~kfk~~~f~~~~cgG~g~~-~q~~s~c~~~~t 211 (285)
.+.........++.+ +|.. |.|.+.. ...|..|.+...
T Consensus 190 ~~~~~~~~~~~f~~~---~~~~-----------c~~~~~~~~~~c~~~~g~~~ 228 (288)
T KOG0715|consen 190 RGLVSNPKEDPFILY---TCSY-----------CLGRGLVLRDNCQACSGAGQ 228 (288)
T ss_pred cccccccccCCccee---eccc-----------ccccceeccchHHHhhcchh
Confidence 753322222333333 3433 7777755 555888877653
No 35
>KOG0717 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.84 E-value=6.6e-22 Score=189.01 Aligned_cols=76 Identities=46% Similarity=0.725 Sum_probs=70.3
Q ss_pred CCCCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCc-hHHHHHHHhhhhhccccCCccccccccccCcccccc
Q 023217 13 TIRRDPYEVLCVSRDSSDQEIKTAYRKLALKYHPDKNVSN-PEAAELFKEVAYSYSILSDPEKRRHYDNAGFEAIDA 88 (285)
Q Consensus 13 ~~~~d~Y~iLgv~~~as~~eIk~ayrklal~~HPDk~~~~-~~a~~~f~~i~~AY~vLsdp~~R~~YD~~G~~~~~~ 88 (285)
...+.||+||||.++|++.+||++||+|||+|||||||+. .+|+++|+.|+.||+|||||+.|+|||.+.++.+..
T Consensus 5 ~~~~c~YE~L~v~~~a~d~eik~~YRklALq~HPDknpd~ieeat~~F~~i~aAYeVLSdp~eR~wyd~hreqil~~ 81 (508)
T KOG0717|consen 5 FKKRCYYEVLGVERDADDDEIKKNYRKLALQYHPDKNPDRIEEATQQFQLIQAAYEVLSDPQERAWYDSHREQILRG 81 (508)
T ss_pred hhhhHHHHHhcccccCCHHHHHHHHHHHHHhhCCCCCCccHHHHHHHHHHHHHHHHHhcChHhhhhHHHHHHHHhcC
Confidence 4568999999999999999999999999999999998865 589999999999999999999999999999887753
No 36
>KOG0716 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.81 E-value=8.9e-21 Score=171.24 Aligned_cols=75 Identities=55% Similarity=0.859 Sum_probs=71.0
Q ss_pred CCCCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHhhhhhccccCCccccccccccCccccc
Q 023217 13 TIRRDPYEVLCVSRDSSDQEIKTAYRKLALKYHPDKNVSNPEAAELFKEVAYSYSILSDPEKRRHYDNAGFEAID 87 (285)
Q Consensus 13 ~~~~d~Y~iLgv~~~as~~eIk~ayrklal~~HPDk~~~~~~a~~~f~~i~~AY~vLsdp~~R~~YD~~G~~~~~ 87 (285)
..+.|+|+|||++++|+.++||||||+|++++|||+++++|++.++|++|+.||+||+||.+|..||.+|+.++.
T Consensus 28 ~~~~~LYdVLgl~k~at~d~IKKaYR~L~~k~HPD~~gd~P~~~dkf~eIN~Ay~ILsD~~kR~~YD~~g~~~l~ 102 (279)
T KOG0716|consen 28 VIRLDLYDVLGLPKTATKDEIKKAYRKLALKYHPDKNGDNPEATDKFKEINTAYAILSDPTKRNVYDEYGELGLK 102 (279)
T ss_pred cchhHHHHHhCCCcccchHHHHHHHHHHHHHhCCCcCCCCchhHHHHHHHHHHHHHhcChhhhhhHHHhhhHHHH
Confidence 346789999999999999999999999999999999999999999999999999999999999999999987764
No 37
>PTZ00341 Ring-infected erythrocyte surface antigen; Provisional
Probab=99.78 E-value=1.4e-19 Score=186.05 Aligned_cols=78 Identities=31% Similarity=0.498 Sum_probs=71.1
Q ss_pred CCCCCCCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHhhhhhccccCCccccccccccCcccccc
Q 023217 10 SAPTIRRDPYEVLCVSRDSSDQEIKTAYRKLALKYHPDKNVSNPEAAELFKEVAYSYSILSDPEKRRHYDNAGFEAIDA 88 (285)
Q Consensus 10 ~~~~~~~d~Y~iLgv~~~as~~eIk~ayrklal~~HPDk~~~~~~a~~~f~~i~~AY~vLsdp~~R~~YD~~G~~~~~~ 88 (285)
+.....++||+||||+++||..+||+|||+||++|||||++++ .|.++|+.|++||+|||||.+|+.||.+|..+++.
T Consensus 567 t~~~~d~dYYdILGVs~dAS~~EIKKAYRKLAlkyHPDKN~~~-~A~ekFq~I~EAYeVLSDp~kRk~YD~~G~~Gl~~ 644 (1136)
T PTZ00341 567 TIEIPDTLFYDILGVGVNADMKEISERYFKLAENYYPPKRSGN-EGFHKFKKINEAYQILGDIDKKKMYNKFGYDGIKG 644 (1136)
T ss_pred cccCCCCChHHHcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCc-hHHHHHHHHHHHHHHhCCHHHHHHHhhccccccCC
Confidence 3445578999999999999999999999999999999999865 68889999999999999999999999999887653
No 38
>KOG0691 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.78 E-value=1.1e-19 Score=168.26 Aligned_cols=73 Identities=48% Similarity=0.759 Sum_probs=69.8
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHhhhhhccccCCccccccccccCccccc
Q 023217 15 RRDPYEVLCVSRDSSDQEIKTAYRKLALKYHPDKNVSNPEAAELFKEVAYSYSILSDPEKRRHYDNAGFEAID 87 (285)
Q Consensus 15 ~~d~Y~iLgv~~~as~~eIk~ayrklal~~HPDk~~~~~~a~~~f~~i~~AY~vLsdp~~R~~YD~~G~~~~~ 87 (285)
..|||+||||+++|++.||++|||++|+++||||||+||.|.++|+.+.+||+||+|+.+|+.||..|..+..
T Consensus 4 ~~dyY~lLgi~~~at~~eIkKaYr~kaL~~HPDKNp~dP~A~ekFq~L~eAy~VL~D~~~R~~YDk~~k~~~~ 76 (296)
T KOG0691|consen 4 DTDYYDLLGISEDATDAEIKKAYRKKALQYHPDKNPGDPQAAEKFQELSEAYEVLSDEESRAAYDKLRKSGSS 76 (296)
T ss_pred cchHHHHhCCCCCCCHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhhccc
Confidence 5799999999999999999999999999999999999999999999999999999999999999999876643
No 39
>KOG0718 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.77 E-value=1.7e-19 Score=172.77 Aligned_cols=79 Identities=39% Similarity=0.691 Sum_probs=71.2
Q ss_pred CCCCCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCc---hHHHHHHHhhhhhccccCCccccccccccCcccccc
Q 023217 12 PTIRRDPYEVLCVSRDSSDQEIKTAYRKLALKYHPDKNVSN---PEAAELFKEVAYSYSILSDPEKRRHYDNAGFEAIDA 88 (285)
Q Consensus 12 ~~~~~d~Y~iLgv~~~as~~eIk~ayrklal~~HPDk~~~~---~~a~~~f~~i~~AY~vLsdp~~R~~YD~~G~~~~~~ 88 (285)
...++|||.+|+|+++||++|||+||||+++.|||||..+. ..|+++|+.|..||||||||++|++||.+|+++++.
T Consensus 5 e~~e~e~Ya~LNlpkdAt~eeI~~AYrr~~~lfHPDkh~dpd~K~~AE~~F~~i~~AyEVLsDp~kRaIYD~~G~qGL~t 84 (546)
T KOG0718|consen 5 ELDEIELYALLNLPKDATDEEIKKAYRRLSRLFHPDKHTDPDQKKAAEEKFQRIQRAYEVLSDPQKRAIYDNYGEQGLKT 84 (546)
T ss_pred ccchhhHHHHhCCCcccCHHHHHHHHHHHHHhcCCcccCChhHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhhhccccc
Confidence 44567999999999999999999999999999999998742 368899999999999999999999999999999874
Q ss_pred CC
Q 023217 89 EG 90 (285)
Q Consensus 89 ~~ 90 (285)
.|
T Consensus 85 ~g 86 (546)
T KOG0718|consen 85 EG 86 (546)
T ss_pred cC
Confidence 33
No 40
>KOG0719 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.74 E-value=1.6e-18 Score=153.53 Aligned_cols=108 Identities=39% Similarity=0.551 Sum_probs=84.7
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCC--CchHHHHHHHhhhhhccccCCccccccccccCccccccCCcc
Q 023217 15 RRDPYEVLCVSRDSSDQEIKTAYRKLALKYHPDKNV--SNPEAAELFKEVAYSYSILSDPEKRRHYDNAGFEAIDAEGMD 92 (285)
Q Consensus 15 ~~d~Y~iLgv~~~as~~eIk~ayrklal~~HPDk~~--~~~~a~~~f~~i~~AY~vLsdp~~R~~YD~~G~~~~~~~~~~ 92 (285)
.+|+|+||||.++|++.+||+|||+|++++|||+++ ...+|+++|+.++.||+||+|.++|+.||..|.-.- .
T Consensus 13 ~~d~YevLGVer~a~~~eIrkAY~klal~~HPDk~~eed~~ea~~kFq~l~k~y~iLsDeekR~~YDetG~idd-~---- 87 (264)
T KOG0719|consen 13 KKDLYEVLGVERDATDKEIRKAYHKLALRLHPDKNHEEDKVEATEKFQQLQKAYQILSDEEKRAVYDETGSIDD-E---- 87 (264)
T ss_pred ccCHHHHhhhcccCCHHHHHHHHHHHHHHhCCCcchhhhHHHHHHHHHHHHHHHHHhhHHHHHHHHhccCCCCC-c----
Confidence 459999999999999999999999999999999995 345899999999999999999999999999885431 0
Q ss_pred ccccccccccHHHHHHHhhccCCCCceeeechhhHHHHhCCce
Q 023217 93 MEIDLSNLGTVNTMFAALFSKLGVPIKTTISANVLEEALNGTV 135 (285)
Q Consensus 93 ~~~d~~~~g~~~~~F~~~F~~~G~~i~~~i~~~~Lee~y~G~~ 135 (285)
+..-..++-++|..+|.. .+...++.++..|.|+.
T Consensus 88 ---~~d~~~~~~e~~~~iyk~-----VteedIeef~a~Y~gSE 122 (264)
T KOG0719|consen 88 ---SGDIDEDWLEFWRAIYKK-----VTEEDIEEFEANYQGSE 122 (264)
T ss_pred ---cchhhhHHHHHHHHHHhh-----cccccHHHHHHHhcccH
Confidence 111123567788888752 23333445677777775
No 41
>PF00226 DnaJ: DnaJ domain; InterPro: IPR001623 The prokaryotic heat shock protein DnaJ interacts with the chaperone hsp70-like DnaK protein []. Structurally, the DnaJ protein consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acids, a glycine-rich region ('G' domain') of about 30 residues, a central domain containing four repeats of a CXXCXGXG motif ('CRR' domain) and a C-terminal region of 120 to 170 residues. Such a structure is shown in the following schematic representation: +------------+-+-------+-----+-----------+--------------------------------+ | N-terminal | | Gly-R | | CXXCXGXG | C-terminal | +------------+-+-------+-----+-----------+--------------------------------+ It is thought that the 'J' domain of DnaJ mediates the interaction with the dnaK protein and consists of four helices, the second of which has a charged surface that includes at least one pair of basic residues that are essential for interaction with the ATPase domain of Hsp70. The J- and CRR-domains are found in many prokaryotic and eukaryotic proteins [], either together or separately. In yeast, J-domains have been classified into 3 groups; the class III proteins are functionally distinct and do not appear to act as molecular chaperones []. ; GO: 0031072 heat shock protein binding; PDB: 2GUZ_C 2L6L_A 1HDJ_A 2EJ7_A 1FPO_C 2CUG_A 2QSA_A 2OCH_A 3BVO_B 3APQ_A ....
Probab=99.73 E-value=8.8e-19 Score=126.87 Aligned_cols=63 Identities=56% Similarity=0.974 Sum_probs=59.8
Q ss_pred CccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCch-HHHHHHHhhhhhccccCCcccccccc
Q 023217 17 DPYEVLCVSRDSSDQEIKTAYRKLALKYHPDKNVSNP-EAAELFKEVAYSYSILSDPEKRRHYD 79 (285)
Q Consensus 17 d~Y~iLgv~~~as~~eIk~ayrklal~~HPDk~~~~~-~a~~~f~~i~~AY~vLsdp~~R~~YD 79 (285)
|||+||||+++++.++||++|+++++++|||+++.+. .+.+.|..|++||++|+||.+|+.||
T Consensus 1 ~~y~iLgl~~~~~~~eik~~y~~l~~~~HPD~~~~~~~~~~~~~~~i~~Ay~~L~~~~~R~~YD 64 (64)
T PF00226_consen 1 NPYEILGLPPDASDEEIKKAYRRLSKQYHPDKNSGDEAEAEEKFARINEAYEILSDPERRRRYD 64 (64)
T ss_dssp HHHHHCTSTTTSSHHHHHHHHHHHHHHTSTTTGTSTHHHHHHHHHHHHHHHHHHHSHHHHHHHH
T ss_pred ChHHHCCCCCCCCHHHHHHHHHhhhhccccccchhhhhhhhHHHHHHHHHHHHhCCHHHHHhcC
Confidence 5899999999999999999999999999999988665 68899999999999999999999998
No 42
>PHA03102 Small T antigen; Reviewed
Probab=99.68 E-value=2.7e-17 Score=139.15 Aligned_cols=85 Identities=20% Similarity=0.303 Sum_probs=71.2
Q ss_pred CCCccccccCCCCC--CHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHhhhhhccccCCccccccccccCccccccCCcc
Q 023217 15 RRDPYEVLCVSRDS--SDQEIKTAYRKLALKYHPDKNVSNPEAAELFKEVAYSYSILSDPEKRRHYDNAGFEAIDAEGMD 92 (285)
Q Consensus 15 ~~d~Y~iLgv~~~a--s~~eIk~ayrklal~~HPDk~~~~~~a~~~f~~i~~AY~vLsdp~~R~~YD~~G~~~~~~~~~~ 92 (285)
.+.+|+||||+++| |.++||+|||++|+++||||+++ .++|++|++||++|+|+.+|..||.+|........
T Consensus 4 ~~~l~~vLGl~~~A~~s~~eIKkAYr~la~~~HPDkgg~----~e~~k~in~Ay~~L~d~~~r~~yd~~g~~~~~~~~-- 77 (153)
T PHA03102 4 SKELMDLLGLPRSAWGNLPLMRKAYLRKCLEFHPDKGGD----EEKMKELNTLYKKFRESVKSLRDLDGEEDSSSEEE-- 77 (153)
T ss_pred HHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCch----hHHHHHHHHHHHHHhhHHHhccccccCCccccccc--
Confidence 35789999999999 99999999999999999999753 46999999999999999999999999976532211
Q ss_pred ccccccccccHHHHHHHhhcc
Q 023217 93 MEIDLSNLGTVNTMFAALFSK 113 (285)
Q Consensus 93 ~~~d~~~~g~~~~~F~~~F~~ 113 (285)
.....+|.++||+
T Consensus 78 --------~~~~~~f~~~fg~ 90 (153)
T PHA03102 78 --------DVPSGYVGATFGD 90 (153)
T ss_pred --------ccHHHHhhhhcCC
Confidence 1156778888865
No 43
>smart00271 DnaJ DnaJ molecular chaperone homology domain.
Probab=99.66 E-value=1e-16 Score=114.22 Aligned_cols=59 Identities=64% Similarity=0.930 Sum_probs=54.9
Q ss_pred CCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCC-chHHHHHHHhhhhhccccCCccc
Q 023217 16 RDPYEVLCVSRDSSDQEIKTAYRKLALKYHPDKNVS-NPEAAELFKEVAYSYSILSDPEK 74 (285)
Q Consensus 16 ~d~Y~iLgv~~~as~~eIk~ayrklal~~HPDk~~~-~~~a~~~f~~i~~AY~vLsdp~~ 74 (285)
+|||+||||+++++.++||+|||++++++|||++++ .+.+.+.|+.|++||++|+||.+
T Consensus 1 ~~~y~vLgl~~~~~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~~~~~l~~Ay~~L~~~~~ 60 (60)
T smart00271 1 TDYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGDKEEAEEKFKEINEAYEVLSDPEK 60 (60)
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHHHcCCCC
Confidence 489999999999999999999999999999999986 57788999999999999999853
No 44
>TIGR03835 termin_org_DnaJ terminal organelle assembly protein TopJ. This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility.
Probab=99.65 E-value=1.1e-16 Score=161.60 Aligned_cols=89 Identities=45% Similarity=0.793 Sum_probs=75.1
Q ss_pred CCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHhhhhhccccCCccccccccccCccccccCCccccc
Q 023217 16 RDPYEVLCVSRDSSDQEIKTAYRKLALKYHPDKNVSNPEAAELFKEVAYSYSILSDPEKRRHYDNAGFEAIDAEGMDMEI 95 (285)
Q Consensus 16 ~d~Y~iLgv~~~as~~eIk~ayrklal~~HPDk~~~~~~a~~~f~~i~~AY~vLsdp~~R~~YD~~G~~~~~~~~~~~~~ 95 (285)
+|||+||||+++|+.++||+|||+|++++|||++++ +.+.++|++|++||++|+||.+|+.||.+|..+.+..+. +
T Consensus 2 ~DYYeVLGVs~dAS~eEIKKAYRKLAKKyHPDKn~~-~eAeekFqeINEAYEVLSDP~KRa~YD~fG~aG~d~e~g---f 77 (871)
T TIGR03835 2 RDYYEVLGIDRDADEQEIKKAFRKLAKKYHPDRNKA-PDAASIFAEINEANDVLSNPKKRANYDKYGHDGVDREDD---F 77 (871)
T ss_pred CChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-hhHHHHHHHHHHHHHHhCCHHHHHHHhhhcccccccccc---c
Confidence 699999999999999999999999999999999875 788899999999999999999999999999776543211 1
Q ss_pred cccccccHHHHHHHhhcc
Q 023217 96 DLSNLGTVNTMFAALFSK 113 (285)
Q Consensus 96 d~~~~g~~~~~F~~~F~~ 113 (285)
....++|..||..
T Consensus 78 -----~f~~DIF~sfFee 90 (871)
T TIGR03835 78 -----DFQADVFNSFFEE 90 (871)
T ss_pred -----chhHHHHHHHhhh
Confidence 1123677777764
No 45
>COG2214 CbpA DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=99.63 E-value=1.6e-16 Score=137.64 Aligned_cols=69 Identities=57% Similarity=0.870 Sum_probs=65.3
Q ss_pred CCCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCchH-HHHHHHhhhhhccccCCccccccccccC
Q 023217 14 IRRDPYEVLCVSRDSSDQEIKTAYRKLALKYHPDKNVSNPE-AAELFKEVAYSYSILSDPEKRRHYDNAG 82 (285)
Q Consensus 14 ~~~d~Y~iLgv~~~as~~eIk~ayrklal~~HPDk~~~~~~-a~~~f~~i~~AY~vLsdp~~R~~YD~~G 82 (285)
...+||+||||+++|+..||++|||++|+++|||+++.++. |.++|+.|++||++|+|+.+|+.||..+
T Consensus 4 ~~~~~y~iLgv~~~as~~eik~ayrkla~~~HPD~~~~~~~~a~~~f~~i~~Ay~vLsd~~~r~~yd~~~ 73 (237)
T COG2214 4 DLLDYYEILGVPPNASLEEIKKAYRKLALKYHPDRNPGDPKVAEEKFKEINEAYEILSDPERRAEYDKIG 73 (237)
T ss_pred hhhhHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHHHHHhhCHHHHHHhhhhc
Confidence 45799999999999999999999999999999999998885 9999999999999999999999999973
No 46
>cd06257 DnaJ DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.
Probab=99.63 E-value=4e-16 Score=109.13 Aligned_cols=55 Identities=64% Similarity=0.988 Sum_probs=51.9
Q ss_pred CccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHhhhhhccccCC
Q 023217 17 DPYEVLCVSRDSSDQEIKTAYRKLALKYHPDKNVSNPEAAELFKEVAYSYSILSD 71 (285)
Q Consensus 17 d~Y~iLgv~~~as~~eIk~ayrklal~~HPDk~~~~~~a~~~f~~i~~AY~vLsd 71 (285)
|||+||||+++++.++||++||+|++++|||++++.+.+.+.|+.|++||++|+|
T Consensus 1 ~~y~vLgl~~~~~~~~ik~~y~~l~~~~HPD~~~~~~~~~~~~~~l~~Ay~~L~d 55 (55)
T cd06257 1 DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDDPEAEEKFKEINEAYEVLSD 55 (55)
T ss_pred ChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHhcC
Confidence 6999999999999999999999999999999997556788999999999999986
No 47
>KOG0721 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.59 E-value=6.1e-16 Score=136.03 Aligned_cols=75 Identities=36% Similarity=0.660 Sum_probs=67.6
Q ss_pred CCCCCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHhhhhhccccCCccccccccccCcccc
Q 023217 12 PTIRRDPYEVLCVSRDSSDQEIKTAYRKLALKYHPDKNVSNPEAAELFKEVAYSYSILSDPEKRRHYDNAGFEAI 86 (285)
Q Consensus 12 ~~~~~d~Y~iLgv~~~as~~eIk~ayrklal~~HPDk~~~~~~a~~~f~~i~~AY~vLsdp~~R~~YD~~G~~~~ 86 (285)
+.+.-|+||||||+++||++|||+|||+|++++||||++...+.++.|..|++||+.|+|+..|+.|..+|.+..
T Consensus 95 ~~~~fDPyEILGl~pgas~~eIKkaYR~LSik~HPDK~~~~~~~e~~~~~I~KAY~aLTD~~sreN~ekYG~PDG 169 (230)
T KOG0721|consen 95 ERQKFDPYEILGLDPGASEKEIKKAYRRLSIKYHPDKQPPEEGDEEFFEAIAKAYQALTDKKSRENWEKYGNPDG 169 (230)
T ss_pred HhhcCCcHHhhCCCCCCCHHHHHHHHHHhhhhhCCCcCCCcchhHHHHHHHHHHHHHhcchhhHHHHHHhCCCCC
Confidence 355679999999999999999999999999999999998545667779999999999999999999999997643
No 48
>KOG0624 consensus dsRNA-activated protein kinase inhibitor P58, contains TPR and DnaJ domains [Defense mechanisms]
Probab=99.57 E-value=9.7e-16 Score=143.34 Aligned_cols=74 Identities=46% Similarity=0.734 Sum_probs=65.3
Q ss_pred CCCCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCch---HHHHHHHhhhhhccccCCccccccccccCccccc
Q 023217 13 TIRRDPYEVLCVSRDSSDQEIKTAYRKLALKYHPDKNVSNP---EAAELFKEVAYSYSILSDPEKRRHYDNAGFEAID 87 (285)
Q Consensus 13 ~~~~d~Y~iLgv~~~as~~eIk~ayrklal~~HPDk~~~~~---~a~~~f~~i~~AY~vLsdp~~R~~YD~~G~~~~~ 87 (285)
+..||||+||||.++|+..||-+||||+|++||||--.+.. .|+++|..|..|-+||+||++|+.||.. ++.++
T Consensus 391 s~kRDYYKILGVkRnAsKqEI~KAYRKlAqkWHPDNFqdEeEKKkAEKKFIDIAAAKEVLsd~EkRrqFDnG-eDPLD 467 (504)
T KOG0624|consen 391 SGKRDYYKILGVKRNASKQEITKAYRKLAQKWHPDNFQDEEEKKKAEKKFIDIAAAKEVLSDPEKRRQFDNG-EDPLD 467 (504)
T ss_pred hccchHHHHhhhcccccHHHHHHHHHHHHHhcCCccccCHHHHHHHHHhhhhHHHHHHhhcCHHHHhhccCC-CCCCC
Confidence 45799999999999999999999999999999999876543 5889999999999999999999999984 44343
No 49
>KOG0550 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.49 E-value=1.2e-14 Score=138.35 Aligned_cols=70 Identities=54% Similarity=0.810 Sum_probs=66.4
Q ss_pred CCCCCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCc-hHHHHHHHhhhhhccccCCcccccccccc
Q 023217 12 PTIRRDPYEVLCVSRDSSDQEIKTAYRKLALKYHPDKNVSN-PEAAELFKEVAYSYSILSDPEKRRHYDNA 81 (285)
Q Consensus 12 ~~~~~d~Y~iLgv~~~as~~eIk~ayrklal~~HPDk~~~~-~~a~~~f~~i~~AY~vLsdp~~R~~YD~~ 81 (285)
.++++|||.||||.++|++.|||+|||++|+.||||++.++ .+|+.+|++|.+||.+|+||.+|..||..
T Consensus 369 kSkRkd~ykilGi~~~as~~eikkayrk~AL~~Hpd~~agsq~eaE~kFkevgeAy~il~d~~kr~r~dsg 439 (486)
T KOG0550|consen 369 KSKRKDWYKILGISRNASDDEIKKAYRKLALVHHPDKNAGSQKEAEAKFKEVGEAYTILSDPMKRVRFDSG 439 (486)
T ss_pred HhhhhhHHHHhhhhhhcccchhhhHHHHHHHHhCCCcCcchhHHHHHHHHHHHHHHHHhcCHHHHhhcccc
Confidence 36789999999999999999999999999999999999887 68999999999999999999999999984
No 50
>KOG0714 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.49 E-value=4.2e-14 Score=128.29 Aligned_cols=74 Identities=51% Similarity=0.834 Sum_probs=66.3
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCc-hHHHHHHHhhhhhccccCCccccccccccCcccccc
Q 023217 15 RRDPYEVLCVSRDSSDQEIKTAYRKLALKYHPDKNVSN-PEAAELFKEVAYSYSILSDPEKRRHYDNAGFEAIDA 88 (285)
Q Consensus 15 ~~d~Y~iLgv~~~as~~eIk~ayrklal~~HPDk~~~~-~~a~~~f~~i~~AY~vLsdp~~R~~YD~~G~~~~~~ 88 (285)
..|||+||+|.++|+.++|++|||++|+++|||+++.. ..|..+|++|.+||++|+||.+|..||.+|.+++..
T Consensus 2 ~~d~~~~l~i~~~as~~~i~ka~~~~a~~~hpdk~~~~~~~~~~~~~~~~ea~~~ls~~~kr~~~d~~~~~~~~~ 76 (306)
T KOG0714|consen 2 GKDYYKILGIARSASEEDIKKAYRKLALKYHPDKNPSPKEVAEAKFKEIAEAYEVLSDPKKRKIYDQYGEEGLKG 76 (306)
T ss_pred cccHHHHhCccccccHHHHHHHHHHHHHhhCCCCCCCchhhHHHHHhhhhccccccCCHHHhhhccccCcccccc
Confidence 46999999999999999999999999999999998865 245568999999999999999999999999866553
No 51
>PRK05014 hscB co-chaperone HscB; Provisional
Probab=99.46 E-value=4.3e-14 Score=122.16 Aligned_cols=65 Identities=23% Similarity=0.367 Sum_probs=58.0
Q ss_pred CCccccccCCCC--CCHHHHHHHHHHHHHHhCCCCCCCch-----HHHHHHHhhhhhccccCCccccccccc
Q 023217 16 RDPYEVLCVSRD--SSDQEIKTAYRKLALKYHPDKNVSNP-----EAAELFKEVAYSYSILSDPEKRRHYDN 80 (285)
Q Consensus 16 ~d~Y~iLgv~~~--as~~eIk~ayrklal~~HPDk~~~~~-----~a~~~f~~i~~AY~vLsdp~~R~~YD~ 80 (285)
.|||++|||++. ++..+|+++||++++++|||+.++.+ .|.+.+..|++||++|+||.+|+.|+.
T Consensus 1 ~~yf~llgl~~~~~~d~~~L~~~yr~l~~~~HPDk~~~~~~~~~~~a~~~s~~iN~AY~~L~dp~~Ra~Yll 72 (171)
T PRK05014 1 MDYFTLFGLPARYDIDTQLLASRYQELQRQFHPDKFANASERERLLAVQQAATINDAYQTLKHPLKRAEYLL 72 (171)
T ss_pred CCHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHCChhHHHHHHH
Confidence 389999999996 68899999999999999999976543 256789999999999999999999985
No 52
>PRK01356 hscB co-chaperone HscB; Provisional
Probab=99.43 E-value=7e-14 Score=120.28 Aligned_cols=66 Identities=24% Similarity=0.402 Sum_probs=57.9
Q ss_pred CCccccccCCCC--CCHHHHHHHHHHHHHHhCCCCCCCch---HHHHHHHhhhhhccccCCcccccccccc
Q 023217 16 RDPYEVLCVSRD--SSDQEIKTAYRKLALKYHPDKNVSNP---EAAELFKEVAYSYSILSDPEKRRHYDNA 81 (285)
Q Consensus 16 ~d~Y~iLgv~~~--as~~eIk~ayrklal~~HPDk~~~~~---~a~~~f~~i~~AY~vLsdp~~R~~YD~~ 81 (285)
.|||++|||++. ++..+|+++||++++++|||+.++.. .+.+.+..|++||+||+||.+|+.|+..
T Consensus 2 ~~yf~llgl~~~f~id~~~L~~aYr~lq~~~HPDk~~~~~~k~~~~~~s~~in~AY~~L~dp~~Ra~YlL~ 72 (166)
T PRK01356 2 QNYFQLLGLPQEYNIDLKILEKQYFAMQVKYHPDKAKTLQEKEQNLIIASELNNAYSTLKDALKRAEYMLL 72 (166)
T ss_pred CCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 589999999996 78999999999999999999987532 2345688999999999999999999864
No 53
>KOG0722 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.42 E-value=5.7e-14 Score=126.23 Aligned_cols=69 Identities=43% Similarity=0.690 Sum_probs=63.4
Q ss_pred CCCCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHhhhhhccccCCccccccccccC
Q 023217 13 TIRRDPYEVLCVSRDSSDQEIKTAYRKLALKYHPDKNVSNPEAAELFKEVAYSYSILSDPEKRRHYDNAG 82 (285)
Q Consensus 13 ~~~~d~Y~iLgv~~~as~~eIk~ayrklal~~HPDk~~~~~~a~~~f~~i~~AY~vLsdp~~R~~YD~~G 82 (285)
...+|.|+||||.++|+.+||++|||+||++||||++++ +++.+.|+.|..||++|.|...|..||-.-
T Consensus 30 CG~enCYdVLgV~Rea~KseIakAYRqLARrhHPDr~r~-~e~k~~F~~iAtayeilkd~e~rt~ydyal 98 (329)
T KOG0722|consen 30 CGAENCYDVLGVAREANKSEIAKAYRQLARRHHPDRNRD-PESKKLFVKIATAYEILKDNETRTQYDYAL 98 (329)
T ss_pred ccchhHHHHhhhhhhccHHHHHHHHHHHHHHhCCcccCC-chhhhhhhhhhcccccccchhhHHhHHHHh
Confidence 345799999999999999999999999999999999984 666699999999999999999999999753
No 54
>PRK00294 hscB co-chaperone HscB; Provisional
Probab=99.42 E-value=1.4e-13 Score=119.16 Aligned_cols=67 Identities=25% Similarity=0.364 Sum_probs=60.2
Q ss_pred CCCCccccccCCCC--CCHHHHHHHHHHHHHHhCCCCCCCchH-----HHHHHHhhhhhccccCCccccccccc
Q 023217 14 IRRDPYEVLCVSRD--SSDQEIKTAYRKLALKYHPDKNVSNPE-----AAELFKEVAYSYSILSDPEKRRHYDN 80 (285)
Q Consensus 14 ~~~d~Y~iLgv~~~--as~~eIk~ayrklal~~HPDk~~~~~~-----a~~~f~~i~~AY~vLsdp~~R~~YD~ 80 (285)
...+||++|||++. .+..+|+++||+|++++|||+..+.+. +.+.+..|++||+||+||.+|+.|+.
T Consensus 2 ~~~~~F~l~~l~~~f~id~~~L~~~Yr~Lq~~~HPDk~~~~~~~e~~~a~~~s~~IN~AY~~L~~p~~Ra~YlL 75 (173)
T PRK00294 2 GTPCHFALFDLQPSFRLDLDQLATRYRELAREVHPDRFADAPEREQRLALERSASLNEAYQTLKSPPRRARYLL 75 (173)
T ss_pred CCCChhhhcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhCChhhhHHHHH
Confidence 46799999999997 678999999999999999999876543 56789999999999999999999995
No 55
>PRK03578 hscB co-chaperone HscB; Provisional
Probab=99.41 E-value=1.7e-13 Score=119.00 Aligned_cols=69 Identities=23% Similarity=0.433 Sum_probs=59.5
Q ss_pred CCccccccCCCC--CCHHHHHHHHHHHHHHhCCCCCCCchHH-----HHHHHhhhhhccccCCccccccccc--cCcc
Q 023217 16 RDPYEVLCVSRD--SSDQEIKTAYRKLALKYHPDKNVSNPEA-----AELFKEVAYSYSILSDPEKRRHYDN--AGFE 84 (285)
Q Consensus 16 ~d~Y~iLgv~~~--as~~eIk~ayrklal~~HPDk~~~~~~a-----~~~f~~i~~AY~vLsdp~~R~~YD~--~G~~ 84 (285)
.|||+||||++. ++..+|+++||+|++++|||+.+..+.+ .+.+..|++||++|+||.+|+.|+. .|.+
T Consensus 6 ~dyf~llglp~~f~~d~~~L~~~yr~lq~~~HPD~~~~~~~~e~~~a~~~s~~iN~AY~tL~~p~~Ra~Yll~l~G~~ 83 (176)
T PRK03578 6 DDHFSLFGLPARFALDEAALDAAYRTVQAQVHPDRFAAAGDAEKRVAMQWATRANEAYQTLRDPLKRARYLLHLRGVD 83 (176)
T ss_pred CCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhCChhhHHHHHHHhcCCC
Confidence 699999999995 6899999999999999999998765543 3446899999999999999999995 4543
No 56
>KOG0720 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.39 E-value=1.1e-13 Score=132.88 Aligned_cols=67 Identities=39% Similarity=0.642 Sum_probs=64.3
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHhhhhhccccCCccccccccccC
Q 023217 15 RRDPYEVLCVSRDSSDQEIKTAYRKLALKYHPDKNVSNPEAAELFKEVAYSYSILSDPEKRRHYDNAG 82 (285)
Q Consensus 15 ~~d~Y~iLgv~~~as~~eIk~ayrklal~~HPDk~~~~~~a~~~f~~i~~AY~vLsdp~~R~~YD~~G 82 (285)
.+|+|.+|||++++++++|||.|||+|...|||||. .|.|++.|+.++.||++|+|+.+|..||...
T Consensus 234 ~~daYsvlGl~~d~sd~~lKk~Yrk~A~LVhPDKn~-~~~A~Eafk~Lq~Afevig~~~kR~eYd~e~ 300 (490)
T KOG0720|consen 234 ILDAYSALGLPSDCSDADLKKNYRKKAMLVHPDKNM-IPRAEEAFKKLQVAFEVIGDSVKRKEYDLEL 300 (490)
T ss_pred CCCchhhcCCCCCCCHHHHHHHHHhhceEeCCCccC-ChhHHHHHHHHHHHHHHhcchhhhhHHHHHH
Confidence 679999999999999999999999999999999998 7899999999999999999999999999854
No 57
>PTZ00100 DnaJ chaperone protein; Provisional
Probab=99.35 E-value=7.2e-13 Score=107.14 Aligned_cols=57 Identities=25% Similarity=0.447 Sum_probs=49.9
Q ss_pred CCCCCCCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHhhhhhccccC
Q 023217 10 SAPTIRRDPYEVLCVSRDSSDQEIKTAYRKLALKYHPDKNVSNPEAAELFKEVAYSYSILS 70 (285)
Q Consensus 10 ~~~~~~~d~Y~iLgv~~~as~~eIk~ayrklal~~HPDk~~~~~~a~~~f~~i~~AY~vLs 70 (285)
...+..+++|+||||+++||.+|||++||+|++++|||++. + .+.|++|++||++|.
T Consensus 59 ~~~Ms~~eAy~ILGv~~~As~~eIkkaYRrLa~~~HPDkgG-s---~~~~~kIneAyevL~ 115 (116)
T PTZ00100 59 ENPMSKSEAYKILNISPTASKERIREAHKQLMLRNHPDNGG-S---TYIASKVNEAKDLLL 115 (116)
T ss_pred cCCCCHHHHHHHcCCCCCCCHHHHHHHHHHHHHHhCCCCCC-C---HHHHHHHHHHHHHHh
Confidence 34455689999999999999999999999999999999863 2 467899999999985
No 58
>PRK09430 djlA Dna-J like membrane chaperone protein; Provisional
Probab=99.29 E-value=1.7e-12 Score=119.57 Aligned_cols=59 Identities=42% Similarity=0.570 Sum_probs=52.6
Q ss_pred CCCCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCC--c-----hHHHHHHHhhhhhccccCC
Q 023217 13 TIRRDPYEVLCVSRDSSDQEIKTAYRKLALKYHPDKNVS--N-----PEAAELFKEVAYSYSILSD 71 (285)
Q Consensus 13 ~~~~d~Y~iLgv~~~as~~eIk~ayrklal~~HPDk~~~--~-----~~a~~~f~~i~~AY~vLsd 71 (285)
+...++|+||||+++||.+|||+|||+|+++||||+..+ . +.|+++|++|++||++|+.
T Consensus 197 ~~~~~ay~vLgv~~~as~~eIk~aYr~L~~~~HPDk~~~~g~~~~~~~~a~ek~~~I~~AYe~L~~ 262 (267)
T PRK09430 197 PTLEDAYKVLGVSESDDDQEIKRAYRKLMSEHHPDKLVAKGLPPEMMEMAKEKAQEIQAAYELIKK 262 (267)
T ss_pred CcHHhHHHHcCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHH
Confidence 455899999999999999999999999999999999643 1 3588999999999999985
No 59
>PHA02624 large T antigen; Provisional
Probab=99.20 E-value=8.1e-12 Score=125.27 Aligned_cols=60 Identities=22% Similarity=0.341 Sum_probs=56.2
Q ss_pred CCCccccccCCCCC--CHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHhhhhhccccCCccccccc
Q 023217 15 RRDPYEVLCVSRDS--SDQEIKTAYRKLALKYHPDKNVSNPEAAELFKEVAYSYSILSDPEKRRHY 78 (285)
Q Consensus 15 ~~d~Y~iLgv~~~a--s~~eIk~ayrklal~~HPDk~~~~~~a~~~f~~i~~AY~vLsdp~~R~~Y 78 (285)
.+++|++|||+++| +.++||+|||++|++|||||+. + .++|++|++||++|+|+.+|..|
T Consensus 10 ~~elyelLGL~~~A~gs~~eIKkAYRkLAkkyHPDKgG-d---eekfk~Ln~AYevL~d~~k~~r~ 71 (647)
T PHA02624 10 SKELMDLLGLPMAAWGNLPLMRKAYLRKCKEYHPDKGG-D---EEKMKRLNSLYKKLQEGVKSARQ 71 (647)
T ss_pred HHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCC-c---HHHHHHHHHHHHHHhcHHHhhhc
Confidence 46899999999999 9999999999999999999974 2 57999999999999999999999
No 60
>COG5407 SEC63 Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion]
Probab=99.09 E-value=3.2e-11 Score=115.93 Aligned_cols=72 Identities=38% Similarity=0.705 Sum_probs=65.5
Q ss_pred CCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCC---c--hHHHHHHHhhhhhccccCCccccccccccCccccc
Q 023217 16 RDPYEVLCVSRDSSDQEIKTAYRKLALKYHPDKNVS---N--PEAAELFKEVAYSYSILSDPEKRRHYDNAGFEAID 87 (285)
Q Consensus 16 ~d~Y~iLgv~~~as~~eIk~ayrklal~~HPDk~~~---~--~~a~~~f~~i~~AY~vLsdp~~R~~YD~~G~~~~~ 87 (285)
-|+|||||++.+++..+||++||+|+.|+||||.++ + .+-++.+++|.+||+.|+|...|+.|=.+|.+..+
T Consensus 98 fDPyEILGI~~~ts~rdik~~yr~Ls~KfhpdK~~~mvn~~rse~Ee~y~~ItkAY~~lTd~k~renyl~yGtPd~p 174 (610)
T COG5407 98 FDPYEILGIDQDTSERDIKKRYRMLSMKFHPDKAPPMVNELRSEYEEKYKTITKAYGLLTDKKRRENYLNYGTPDSP 174 (610)
T ss_pred CChHHhhcccCCCcHHHHHHHHHhheeecChhhcCCCChhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhcCCCCCC
Confidence 599999999999999999999999999999999875 1 36778899999999999999999999999976544
No 61
>PRK01773 hscB co-chaperone HscB; Provisional
Probab=98.97 E-value=4.7e-10 Score=97.16 Aligned_cols=65 Identities=23% Similarity=0.297 Sum_probs=57.4
Q ss_pred CCccccccCCCC--CCHHHHHHHHHHHHHHhCCCCCCCch-----HHHHHHHhhhhhccccCCccccccccc
Q 023217 16 RDPYEVLCVSRD--SSDQEIKTAYRKLALKYHPDKNVSNP-----EAAELFKEVAYSYSILSDPEKRRHYDN 80 (285)
Q Consensus 16 ~d~Y~iLgv~~~--as~~eIk~ayrklal~~HPDk~~~~~-----~a~~~f~~i~~AY~vLsdp~~R~~YD~ 80 (285)
.|||++|||++. .+..+++++||+|.+++|||+....+ .+.+.-..||+||.+|+||-+|+.|=.
T Consensus 2 ~nyF~lf~lp~~F~iD~~~L~~~y~~Lq~~~HPD~f~~~~~~eq~~a~~~ss~iN~AY~tLkdPl~RA~YLL 73 (173)
T PRK01773 2 NNPFALFDLPVDFQLDNALLSERYLALQKSLHPDNFANSSAQEQRLAMQKSAEVNDALQILKDPILRAEAII 73 (173)
T ss_pred CChHHhcCCCCCCCCCHHHHHHHHHHHHHHhCcCcccCCCHHHHHHHHHHHHHHHHHHHHHCChHHHHHHHH
Confidence 599999999996 89999999999999999999976543 245568899999999999999999964
No 62
>KOG1150 consensus Predicted molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=98.93 E-value=5.8e-10 Score=97.40 Aligned_cols=65 Identities=34% Similarity=0.623 Sum_probs=59.5
Q ss_pred CCCCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCc-hHHHHHHHhhhhhccccCCcccccc
Q 023217 13 TIRRDPYEVLCVSRDSSDQEIKTAYRKLALKYHPDKNVSN-PEAAELFKEVAYSYSILSDPEKRRH 77 (285)
Q Consensus 13 ~~~~d~Y~iLgv~~~as~~eIk~ayrklal~~HPDk~~~~-~~a~~~f~~i~~AY~vLsdp~~R~~ 77 (285)
-.+-++|+||.|.|..+.++||+.||+|++..|||||++| +.|...|--|..||..|-|+.-|..
T Consensus 50 yfnLNpfeVLqIdpev~~edikkryRklSilVHPDKN~Dd~~rAqkAFdivkKA~k~l~n~~~rkr 115 (250)
T KOG1150|consen 50 YFNLNPFEVLQIDPEVTDEDIKKRYRKLSILVHPDKNPDDAERAQKAFDIVKKAYKLLENDKIRKR 115 (250)
T ss_pred ccccChHHHHhcCCCCCHHHHHHHHHhhheeecCCCCcccHHHHHHHHHHHHHHHHHHhCHHHHHH
Confidence 3567999999999999999999999999999999999988 6788999999999999999975544
No 63
>TIGR00714 hscB Fe-S protein assembly co-chaperone HscB. This model describes the small subunit, Hsc20 (20K heat shock cognate protein) of a pair of proteins Hsc66-Hsc20, related to the DnaK-DnaJ heat shock proteins, which also serve as molecular chaperones. Hsc20, unlike DnaJ, appears not to have chaperone activity on its own, but to act solely as a regulatory subunit for Hsc66 (i.e., to be a co-chaperone). The gene for Hsc20 in E. coli, hscB, is not induced by heat shock.
Probab=98.89 E-value=1.2e-09 Score=93.16 Aligned_cols=54 Identities=30% Similarity=0.445 Sum_probs=47.1
Q ss_pred CCHHHHHHHHHHHHHHhCCCCCCCch-----HHHHHHHhhhhhccccCCcccccccccc
Q 023217 28 SSDQEIKTAYRKLALKYHPDKNVSNP-----EAAELFKEVAYSYSILSDPEKRRHYDNA 81 (285)
Q Consensus 28 as~~eIk~ayrklal~~HPDk~~~~~-----~a~~~f~~i~~AY~vLsdp~~R~~YD~~ 81 (285)
.+..+|+++||++++++|||+.++.. .+.+.+..|++||++|+||.+|+.|+..
T Consensus 3 iD~~~L~~~yr~lq~~~HPD~~~~~~~~~~~~a~~~s~~iN~AY~~L~~p~~Ra~ylL~ 61 (157)
T TIGR00714 3 LDTQALSLRYQDLQRQYHPDKFASGSAQEQLAAVQQSTTLNQAYQTLKDPLMRAEYMLS 61 (157)
T ss_pred CCHHHHHHHHHHHHHHHCcCCCCCCChhhhHHHHHHHHHHHHHHHHhCChhhhHHHHHH
Confidence 47789999999999999999965432 3667899999999999999999999974
No 64
>COG5269 ZUO1 Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones]
Probab=98.84 E-value=1e-09 Score=99.92 Aligned_cols=75 Identities=31% Similarity=0.467 Sum_probs=64.3
Q ss_pred CCCCCCCCccccccCCC---CCCHHHHHHHHHHHHHHhCCCCCC--CchHHHHHHHhhhhhccccCCccccccccccCcc
Q 023217 10 SAPTIRRDPYEVLCVSR---DSSDQEIKTAYRKLALKYHPDKNV--SNPEAAELFKEVAYSYSILSDPEKRRHYDNAGFE 84 (285)
Q Consensus 10 ~~~~~~~d~Y~iLgv~~---~as~~eIk~ayrklal~~HPDk~~--~~~~a~~~f~~i~~AY~vLsdp~~R~~YD~~G~~ 84 (285)
...+...|+|.+|||+. .|++.+|.+|.++.+.+||||+.. ++..-.+.|+.|+.||+||+|+.+|.+||+--..
T Consensus 37 ~k~Wk~~DlYa~lgLskyR~ka~~~qi~kah~kkv~kyHPDk~aa~g~~~~d~fFk~iqkA~evL~D~~~R~qyDS~df~ 116 (379)
T COG5269 37 FKNWKKVDLYALLGLSKYRTKAIPPQILKAHKKKVYKYHPDKTAAGGNKGCDEFFKLIQKAREVLGDRKLRLQYDSNDFD 116 (379)
T ss_pred hhhhhhhhHHHHhchHhhhcCCCcHHHHHHHHHHHHHhCccchhccCCCCcHHHHHHHHHHHHHhccHHHHhhccccccc
Confidence 34566789999999997 689999999999999999999973 2345568899999999999999999999986543
No 65
>KOG1789 consensus Endocytosis protein RME-8, contains DnaJ domain [Intracellular trafficking, secretion, and vesicular transport; Posttranslational modification, protein turnover, chaperones]
Probab=98.24 E-value=7.4e-07 Score=93.30 Aligned_cols=58 Identities=40% Similarity=0.571 Sum_probs=48.7
Q ss_pred CCCCCCCCccccccCCCCC----CHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHhhhhhccccC
Q 023217 10 SAPTIRRDPYEVLCVSRDS----SDQEIKTAYRKLALKYHPDKNVSNPEAAELFKEVAYSYSILS 70 (285)
Q Consensus 10 ~~~~~~~d~Y~iLgv~~~a----s~~eIk~ayrklal~~HPDk~~~~~~a~~~f~~i~~AY~vLs 70 (285)
|..+..-+.|+||.|+-+- ..+.||++|+|||.+||||||| +..++|..+++|||.|+
T Consensus 1275 P~~mS~d~A~eiL~i~l~n~~hD~~~KirrqY~kLA~kYHPDKNP---EGRemFe~VnKAYE~L~ 1336 (2235)
T KOG1789|consen 1275 PATMSVDLAREILSVDLTNEEHDKPAKIRRQYYKLAAKYHPDKNP---EGREMFERVNKAYELLS 1336 (2235)
T ss_pred CCccchHHHHHHhccccCCCCcccHHHHHHHHHHHHHHhCCCCCc---hHHHHHHHHHHHHHHHH
Confidence 4445566889999998642 3478999999999999999985 55789999999999998
No 66
>KOG0723 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=98.13 E-value=1.8e-06 Score=68.48 Aligned_cols=57 Identities=28% Similarity=0.405 Sum_probs=47.8
Q ss_pred CCCCCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHhhhhhccccCCc
Q 023217 12 PTIRRDPYEVLCVSRDSSDQEIKTAYRKLALKYHPDKNVSNPEAAELFKEVAYSYSILSDP 72 (285)
Q Consensus 12 ~~~~~d~Y~iLgv~~~as~~eIk~ayrklal~~HPDk~~~~~~a~~~f~~i~~AY~vLsdp 72 (285)
.|.++..-.||||+++++.+.||+|+||+++.+|||+..+ | -.-.+|++|+++|...
T Consensus 52 kMsr~EA~lIL~v~~s~~k~KikeaHrriM~~NHPD~GGS-P---YlAsKINEAKdlLe~~ 108 (112)
T KOG0723|consen 52 KMSRREAALILGVTPSLDKDKIKEAHRRIMLANHPDRGGS-P---YLASKINEAKDLLEGT 108 (112)
T ss_pred ccchHHHHHHhCCCccccHHHHHHHHHHHHHcCCCcCCCC-H---HHHHHHHHHHHHHhcc
Confidence 3556677789999999999999999999999999999874 3 3345699999999754
No 67
>KOG0568 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=98.06 E-value=2.3e-06 Score=76.70 Aligned_cols=56 Identities=21% Similarity=0.459 Sum_probs=49.1
Q ss_pred CCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHhhhhhcc-ccCCc
Q 023217 16 RDPYEVLCVSRDSSDQEIKTAYRKLALKYHPDKNVSNPEAAELFKEVAYSYS-ILSDP 72 (285)
Q Consensus 16 ~d~Y~iLgv~~~as~~eIk~ayrklal~~HPDk~~~~~~a~~~f~~i~~AY~-vLsdp 72 (285)
+.+|.||||..+|+.++++.||.+|++++|||...+ ....++|.+|.+||. ||+..
T Consensus 47 ~e~fril~v~e~~~adevr~af~~lakq~hpdsgs~-~adaa~f~qideafrkvlq~~ 103 (342)
T KOG0568|consen 47 MECFRILGVEEGADADEVREAFHDLAKQVHPDSGSE-EADAARFIQIDEAFRKVLQEK 103 (342)
T ss_pred HHHHHHhcccccCchhHHHHHHHHHHHHcCCCCCCc-cccHHHHHHHHHHHHHHHHHH
Confidence 578999999999999999999999999999998864 344578999999999 77643
No 68
>PF00684 DnaJ_CXXCXGXG: DnaJ central domain; InterPro: IPR001305 The hsp70 chaperone machine performs many diverse roles in the cell, including folding of nascent proteins, translocation of polypeptides across organelle membranes, coordinating responses to stress, and targeting selected proteins for degradation. DnaJ is a member of the hsp40 family of molecular chaperones, which is also called the J-protein family, the members of which regulate the activity of hsp70s. DnaJ (hsp40) binds to DnaK (hsp70) and stimulates its ATPase activity, generating the ADP-bound state of DnaK, which interacts stably with the polypeptide substrate []. Besides stimulating the ATPase activity of DnaK through its J-domain, DnaJ also associates with unfolded polypeptide chains and prevents their aggregation []. DnaJ consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acid residues, a glycine and phenylalanine-rich domain ('G/F' domain), a central cysteine rich domain (CR-type zinc finger) containing four repeats of a CXXCXGXG motif which can coordinate two zinc atom and a C-terminal domain (CTD) []. This entry represents the central cysteine-rich (CR) domain of DnaJ proteins. This central cysteine rich domain (CR-type zinc finger) has an overall V-shaped extended beta-hairpin topology and contains four repeats of the motif CXXCXGXG where X is any amino acid. The isolated cysteine rich domain folds in zinc dependent fashion. Each set of two repeats binds one unit of zinc. Although this domain has been implicated in substrate binding, no evidence of specific interaction between the isolated DnaJ cysteine rich domain and various hydrophobic peptides has been found [].; GO: 0031072 heat shock protein binding, 0051082 unfolded protein binding; PDB: 1NLT_A 2CTT_A 1EXK_A.
Probab=96.79 E-value=0.002 Score=47.01 Aligned_cols=59 Identities=25% Similarity=0.286 Sum_probs=40.0
Q ss_pred cCCCCcc-ccccccccccccceeEE-EEEccceeEEEEEecCcccchhcccccccCcceeee--eccccccCCc
Q 023217 140 LPIGTSV-SGKVEKQCAHFFGVTIN-DQQAEAGIVVRVTSTAQSKFKLLYFEQDTNGGYGLA--LQEDSEKTGK 209 (285)
Q Consensus 140 l~~G~~~-~~k~~k~c~~c~G~~i~-~~q~~~G~v~q~qs~~~~kfk~~~f~~~~cgG~g~~--~q~~s~c~~~ 209 (285)
.+.|+++ ......+|..|.|.++. ..+..++++++++++|.. |+|.|.. .+.|..|.++
T Consensus 3 ~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~~~~~~~~~C~~-----------C~G~G~~i~~~~C~~C~G~ 65 (66)
T PF00684_consen 3 KCNGTGAKPGKKPKTCPQCNGSGQVTRRQQTPGGVFQMQQTCPK-----------CGGTGKIIEKDPCKTCKGS 65 (66)
T ss_dssp CCTTTSB-STTT-EE-TTSSSSSEEEEEEESSSTTEEEEEE-TT-----------TSSSSEE-TSSB-SSSTTS
T ss_pred cCCCcccCCCCCCcCCcCCCCeeEEEEEEeCCCeEEEEEEECCC-----------CcceeeEECCCCCCCCCCc
Confidence 3567776 44455689999876442 233377888999999988 9999955 6889999875
No 69
>KOG3192 consensus Mitochondrial J-type chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=96.59 E-value=0.00088 Score=56.81 Aligned_cols=67 Identities=22% Similarity=0.366 Sum_probs=54.3
Q ss_pred CCCCccccccCCC--CCCHHHHHHHHHHHHHHhCCCCCCC----c-hHHHHHHHhhhhhccccCCccccccccc
Q 023217 14 IRRDPYEVLCVSR--DSSDQEIKTAYRKLALKYHPDKNVS----N-PEAAELFKEVAYSYSILSDPEKRRHYDN 80 (285)
Q Consensus 14 ~~~d~Y~iLgv~~--~as~~eIk~ayrklal~~HPDk~~~----~-~~a~~~f~~i~~AY~vLsdp~~R~~YD~ 80 (285)
...+||.++|... ...++.++.-|.-...+.|||+... + ..|.+.-.++++||.+|.||-+|+.|=.
T Consensus 6 ~~~~ff~~Fg~e~~~~~~p~~l~~~~~~~skkL~~d~~~~~~~~~~d~a~eqSa~lnkAY~TLk~pL~RA~Yil 79 (168)
T KOG3192|consen 6 SPSRFFDIFGMELSFKIDPDKLKEKYTDISKKLHPDRPGLSFAGDTDQASEQSAELNKAYDTLKDPLARARYLL 79 (168)
T ss_pred hHHHHHHHhccccCCCCCcchhhHHHHHHHHhhCcccccccccccchhHHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 3468999998765 4567777779999999999998321 1 2577889999999999999999999953
No 70
>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]
Probab=96.49 E-value=0.001 Score=57.63 Aligned_cols=54 Identities=33% Similarity=0.482 Sum_probs=47.0
Q ss_pred CCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCC--ch-----HHHHHHHhhhhhcccc
Q 023217 16 RDPYEVLCVSRDSSDQEIKTAYRKLALKYHPDKNVS--NP-----EAAELFKEVAYSYSIL 69 (285)
Q Consensus 16 ~d~Y~iLgv~~~as~~eIk~ayrklal~~HPDk~~~--~~-----~a~~~f~~i~~AY~vL 69 (285)
.+.|.+|+|...++..+|+++||++...+|||+... .+ .+.+++++|++||+.+
T Consensus 113 ~~~l~~l~~~~~~~~~~i~~~~r~l~~e~~~d~a~~~~~~~e~~~~~~~~~~~i~~a~~~~ 173 (174)
T COG1076 113 EDALKVLGVEIKADQDAIKKAYRKLLSEQHPDKAAAKGLKLEFIEKLKEKLQEIQEAYEDI 173 (174)
T ss_pred hhHHHHhcCchhhhHHHHHHHHHHHHHhcCHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhc
Confidence 688999999999999999999999999999998532 22 5788899999999753
No 71
>KOG0431 consensus Auxilin-like protein and related proteins containing DnaJ domain [General function prediction only]
Probab=95.52 E-value=0.011 Score=58.67 Aligned_cols=44 Identities=27% Similarity=0.405 Sum_probs=33.9
Q ss_pred CCCCHHHHHHHHHHHHHHhCCCCCCCch-------HHHHHHHhhhhhcccc
Q 023217 26 RDSSDQEIKTAYRKLALKYHPDKNVSNP-------EAAELFKEVAYSYSIL 69 (285)
Q Consensus 26 ~~as~~eIk~ayrklal~~HPDk~~~~~-------~a~~~f~~i~~AY~vL 69 (285)
.=.+.++|||+|||..|..||||.+..+ -|++.|-.+++|++..
T Consensus 398 DLVtp~~VKKaYrKA~L~VHPDKlqq~gas~~qK~Iaekvfd~l~eawn~f 448 (453)
T KOG0431|consen 398 DLVTPAQVKKAYRKAVLCVHPDKLQQKGASLEQKYIAEKVFDALSEAWNKF 448 (453)
T ss_pred hccCHHHHHHHHHhhhheeCcccccCCcccHHHHHHHHHHHHHHHHHHHhh
Confidence 3458999999999999999999977542 2556677777777644
No 72
>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]
Probab=95.32 E-value=0.0059 Score=52.83 Aligned_cols=66 Identities=32% Similarity=0.405 Sum_probs=51.1
Q ss_pred CccccccCCCCC--CHHHHHHHHHHHHHHhCCCCCCCchH-----HHHHHHhhhhhccccCCccccccccccC
Q 023217 17 DPYEVLCVSRDS--SDQEIKTAYRKLALKYHPDKNVSNPE-----AAELFKEVAYSYSILSDPEKRRHYDNAG 82 (285)
Q Consensus 17 d~Y~iLgv~~~a--s~~eIk~ayrklal~~HPDk~~~~~~-----a~~~f~~i~~AY~vLsdp~~R~~YD~~G 82 (285)
++...+|.++.+ ..+.++..|+.+.+.+|||+....+. +.+.+..++.||.+|.+|-+|..|=..-
T Consensus 2 ~~~~~~~~~~~f~~~~~~l~~~~~~~~~~~~~dr~~~~~~~~~~~~l~~~~~~~~a~~tLk~~l~ra~~~lal 74 (174)
T COG1076 2 DGFVLFGLPRAFQIDLDALKLQYRELQRAYHPDRFGKASEAEQRKALQQSAEVNPAYQTLKDPLLRAEYLLAL 74 (174)
T ss_pred CcccccccHHHHHHHHhHhhhhHHHHHHhhCcccccccchHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHh
Confidence 344555665544 45668999999999999999765432 4457999999999999999999996543
No 73
>PF03656 Pam16: Pam16; InterPro: IPR005341 The Pam16 protein is the fifth essential subunit of the pre-sequence translocase-associated protein import motor (PAM) []. In Saccharomyces cerevisiae (Baker's yeast), Pam16 is required for preprotein translocation into the matrix, but not for protein insertion into the inner membrane [].; PDB: 2GUZ_J.
Probab=93.40 E-value=0.082 Score=43.68 Aligned_cols=54 Identities=24% Similarity=0.243 Sum_probs=35.4
Q ss_pred CCCCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHhhhhhccccC
Q 023217 13 TIRRDPYEVLCVSRDSSDQEIKTAYRKLALKYHPDKNVSNPEAAELFKEVAYSYSILS 70 (285)
Q Consensus 13 ~~~~d~Y~iLgv~~~as~~eIk~ayrklal~~HPDk~~~~~~a~~~f~~i~~AY~vLs 70 (285)
+....-.+||+|++.++.++|.+.|.+|-..++|++..+ .-.-.+|..|.+.|.
T Consensus 55 Mtl~EA~~ILnv~~~~~~eeI~k~y~~Lf~~Nd~~kGGS----fYLQSKV~rAKErl~ 108 (127)
T PF03656_consen 55 MTLDEARQILNVKEELSREEIQKRYKHLFKANDPSKGGS----FYLQSKVFRAKERLE 108 (127)
T ss_dssp --HHHHHHHHT--G--SHHHHHHHHHHHHHHT-CCCTS-----HHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHcCCCCccCHHHHHHHHHHHHhccCCCcCCC----HHHHHHHHHHHHHHH
Confidence 444567899999999999999999999999999998753 122234566666554
No 74
>PLN03165 chaperone protein dnaJ-related; Provisional
Probab=92.27 E-value=0.25 Score=39.92 Aligned_cols=54 Identities=15% Similarity=0.081 Sum_probs=38.3
Q ss_pred cCCCCccccccccccccccceeEEEEEccceeEEEEEecCcccchhcccccccCcceeeeeccccccCCceecc
Q 023217 140 LPIGTSVSGKVEKQCAHFFGVTINDQQAEAGIVVRVTSTAQSKFKLLYFEQDTNGGYGLALQEDSEKTGKVTSA 213 (285)
Q Consensus 140 l~~G~~~~~k~~k~c~~c~G~~i~~~q~~~G~v~q~qs~~~~kfk~~~f~~~~cgG~g~~~q~~s~c~~~~t~~ 213 (285)
.|.|++. +.|..|.|.++..++..+ .++.+++|.. |.|.|+. .|..|.|+.+.+
T Consensus 46 ~C~GsG~-----~~C~~C~G~G~v~~~~~g--~~q~~~~C~~-----------C~G~Gk~--~C~~C~G~G~~~ 99 (111)
T PLN03165 46 PCSGTGA-----QVCRFCVGSGNVTVELGG--GEKEVSKCIN-----------CDGAGSL--TCTTCQGSGIQP 99 (111)
T ss_pred CCCCCCC-----cCCCCCcCcCeEEEEeCC--cEEEEEECCC-----------CCCccee--eCCCCCCCEEEe
Confidence 3455554 379999988766655432 4677888877 9999974 499999988543
No 75
>KOG0724 consensus Zuotin and related molecular chaperones (DnaJ superfamily), contains DNA-binding domains [Posttranslational modification, protein turnover, chaperones]
Probab=80.11 E-value=1.1 Score=42.44 Aligned_cols=56 Identities=38% Similarity=0.523 Sum_probs=44.8
Q ss_pred CCCHHHHHHHHHHHHHHhCCCCCCC----chHHHHHHHhhhhhccccCCccccccccccC
Q 023217 27 DSSDQEIKTAYRKLALKYHPDKNVS----NPEAAELFKEVAYSYSILSDPEKRRHYDNAG 82 (285)
Q Consensus 27 ~as~~eIk~ayrklal~~HPDk~~~----~~~a~~~f~~i~~AY~vLsdp~~R~~YD~~G 82 (285)
-++..+|+.+|+..++.+||++-.. .-.-.+.+++|.+||++|++..+|...|..-
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~i~ka~~i~~~~~~~~t~~~~~ 62 (335)
T KOG0724|consen 3 LASEDELRLAYREMALKSHPEKKSFYEKLSLWTEEEFKKIEKALAILDDDEPRRTPDSWD 62 (335)
T ss_pred cccHHHHHHHHHHHhhhcCcHHHHHHHHhhhhHHHHHHHHHHHHHHHhccccccchhhhh
Confidence 3678899999999999999998631 1244567999999999999977767777654
No 76
>PF13446 RPT: A repeated domain in UCH-protein
Probab=79.16 E-value=3.1 Score=29.46 Aligned_cols=27 Identities=26% Similarity=0.492 Sum_probs=24.6
Q ss_pred CCccccccCCCCCCHHHHHHHHHHHHH
Q 023217 16 RDPYEVLCVSRDSSDQEIKTAYRKLAL 42 (285)
Q Consensus 16 ~d~Y~iLgv~~~as~~eIk~ayrklal 42 (285)
.+.|++|||+++.+++.|-.+|+....
T Consensus 5 ~~Ay~~Lgi~~~~~Dd~Ii~~f~~~~~ 31 (62)
T PF13446_consen 5 EEAYEILGIDEDTDDDFIISAFQSKVN 31 (62)
T ss_pred HHHHHHhCcCCCCCHHHHHHHHHHHHH
Confidence 467999999999999999999999877
No 77
>PF11833 DUF3353: Protein of unknown function (DUF3353); InterPro: IPR021788 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 205 to 258 amino acids in length.
Probab=75.31 E-value=3.7 Score=36.30 Aligned_cols=38 Identities=26% Similarity=0.362 Sum_probs=29.2
Q ss_pred CCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHhhhhhccccC
Q 023217 25 SRDSSDQEIKTAYRKLALKYHPDKNVSNPEAAELFKEVAYSYSILS 70 (285)
Q Consensus 25 ~~~as~~eIk~ayrklal~~HPDk~~~~~~a~~~f~~i~~AY~vLs 70 (285)
+++||.+||++|+.++..+|--| + +.-..|..||+.+.
T Consensus 1 S~~ASfeEIq~Arn~ll~~y~gd-----~---~~~~~IEaAYD~IL 38 (194)
T PF11833_consen 1 SEDASFEEIQAARNRLLAQYAGD-----E---KSREAIEAAYDAIL 38 (194)
T ss_pred CCCCCHHHHHHHHHHHHHHhcCC-----H---HHHHHHHHHHHHHH
Confidence 57999999999999999998333 2 34456888998543
No 78
>TIGR02642 phage_xxxx uncharacterized phage protein. This uncharacterized protein is found in prophage regions of Shewanella oneidensis MR-1, Vibrio vulnificus YJ016, Yersinia pseudotuberculosis IP 32953, and Aeromonas hydrophila ATCC7966. It appears to have regions of sequence similarity to phage lambda antitermination protein Q.
Probab=66.25 E-value=6.5 Score=34.59 Aligned_cols=35 Identities=20% Similarity=0.116 Sum_probs=27.4
Q ss_pred Ccceeeee---ccccccCCceecccceEeeeeeeeccc
Q 023217 193 NGGYGLAL---QEDSEKTGKVTSAGMYFLHFQVYRMDS 227 (285)
Q Consensus 193 cgG~g~~~---q~~s~c~~~~t~~~~~~~~~~~~~~~~ 227 (285)
|+|.|+++ .+|..|.|+++....--+-+.+++.+.
T Consensus 105 C~G~G~~i~~~~~C~~C~G~G~v~~~~~~~~k~~g~~~ 142 (186)
T TIGR02642 105 CRGTGLIQRRQRECDTCAGTGRFRPTVEDLLKSFGVDS 142 (186)
T ss_pred CCCeeEEecCCCCCCCCCCccEEeeeEEEEEEeeeccC
Confidence 89999774 579999998877777777777777654
No 79
>PF14687 DUF4460: Domain of unknown function (DUF4460)
Probab=59.78 E-value=12 Score=30.21 Aligned_cols=48 Identities=25% Similarity=0.358 Sum_probs=35.1
Q ss_pred CCCCHHHHHHHHHHHHHHhCCCCCCCchHH----HHHHHhhhhhccccCCcc
Q 023217 26 RDSSDQEIKTAYRKLALKYHPDKNVSNPEA----AELFKEVAYSYSILSDPE 73 (285)
Q Consensus 26 ~~as~~eIk~ayrklal~~HPDk~~~~~~a----~~~f~~i~~AY~vLsdp~ 73 (285)
+..+..+++.|-|..-++.|||.-...|++ ++-++.++.--+.|..+.
T Consensus 4 r~~~~~~l~~aLr~Fy~~VHPDlF~~~P~~k~~Ne~SLk~Ln~~Ld~l~~~~ 55 (112)
T PF14687_consen 4 RNLSSPDLRSALRPFYFAVHPDLFGQHPEEKQVNEESLKLLNSYLDSLKKRK 55 (112)
T ss_pred hhhhhHHHHHHHHHHHHHhCCcccccChHHHHhhHHHHHHHHHHHHHHhccC
Confidence 345778899999999999999976555532 233777777777666553
No 80
>PF14453 ThiS-like: ThiS-like ubiquitin
Probab=56.34 E-value=9 Score=27.27 Aligned_cols=22 Identities=36% Similarity=0.560 Sum_probs=20.4
Q ss_pred hcCCCCcceeeeecCCceEEEE
Q 023217 245 RLEGLQPCEVSELKAGTHIFAV 266 (285)
Q Consensus 245 ~l~~~~~~~~~~~~~g~h~~~v 266 (285)
-+++|++.+-..|++|++||++
T Consensus 33 I~NGF~~~~d~~L~e~D~v~~I 54 (57)
T PF14453_consen 33 ILNGFPTKEDIELKEGDEVFLI 54 (57)
T ss_pred EEcCcccCCccccCCCCEEEEE
Confidence 5899999999999999999986
No 81
>COG5552 Uncharacterized conserved protein [Function unknown]
Probab=38.80 E-value=83 Score=23.72 Aligned_cols=34 Identities=15% Similarity=0.152 Sum_probs=26.9
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCC
Q 023217 15 RRDPYEVLCVSRDSSDQEIKTAYRKLALKYHPDK 48 (285)
Q Consensus 15 ~~d~Y~iLgv~~~as~~eIk~ayrklal~~HPDk 48 (285)
+++--++.+++|.|++.||+.|-++.++|..--.
T Consensus 2 CRNIk~LfnfdPPAT~~EvrdAAlQfVRKlSGtT 35 (88)
T COG5552 2 CRNIKELFNFDPPATPVEVRDAALQFVRKLSGTT 35 (88)
T ss_pred ccchHHHhCCCCCCCcHHHHHHHHHHHHHhcCCC
Confidence 4566688999999999999999877777764333
No 82
>KOG3442 consensus Uncharacterized conserved protein [Function unknown]
Probab=36.73 E-value=42 Score=27.70 Aligned_cols=39 Identities=21% Similarity=0.220 Sum_probs=33.1
Q ss_pred CCCCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCC
Q 023217 13 TIRRDPYEVLCVSRDSSDQEIKTAYRKLALKYHPDKNVS 51 (285)
Q Consensus 13 ~~~~d~Y~iLgv~~~as~~eIk~ayrklal~~HPDk~~~ 51 (285)
+.....-+||+|++..+.++|.+.|..|-..+.+.|...
T Consensus 56 iTlqEa~qILnV~~~ln~eei~k~yehLFevNdkskGGS 94 (132)
T KOG3442|consen 56 ITLQEAQQILNVKEPLNREEIEKRYEHLFEVNDKSKGGS 94 (132)
T ss_pred ccHHHHhhHhCCCCCCCHHHHHHHHHHHHhccCcccCcc
Confidence 444566789999999999999999999999988887653
No 83
>COG4033 Uncharacterized protein conserved in archaea [Function unknown]
Probab=36.35 E-value=29 Score=27.31 Aligned_cols=21 Identities=14% Similarity=0.453 Sum_probs=15.5
Q ss_pred ecCCceEEEE------EcCccceEEEE
Q 023217 257 LKAGTHIFAV------YGLNCKFYIFT 277 (285)
Q Consensus 257 ~~~g~h~~~v------y~~n~~~~~~~ 277 (285)
|.||-|++++ |+|||+...||
T Consensus 41 I~~g~~lIG~ppIpvg~~~~~iifpyt 67 (102)
T COG4033 41 ILPGIFLIGIPPIPVGYSGEAIIFPYT 67 (102)
T ss_pred eccCeeEeccCCcceeecCCEEEEEec
Confidence 4566677665 89999887775
No 84
>PF09866 DUF2093: Uncharacterized protein conserved in bacteria (DUF2093); InterPro: IPR018661 This family of various hypothetical prokaryotic proteins has no known function.
Probab=35.07 E-value=24 Score=23.56 Aligned_cols=11 Identities=18% Similarity=0.359 Sum_probs=9.3
Q ss_pred ecCCceEEEEE
Q 023217 257 LKAGTHIFAVY 267 (285)
Q Consensus 257 ~~~g~h~~~vy 267 (285)
|+||+|++|-.
T Consensus 2 l~pG~~V~CAV 12 (42)
T PF09866_consen 2 LSPGSFVRCAV 12 (42)
T ss_pred ccCCCEEEEEe
Confidence 78999999853
No 85
>PF14347 DUF4399: Domain of unknown function (DUF4399)
Probab=32.06 E-value=41 Score=25.82 Aligned_cols=24 Identities=25% Similarity=0.189 Sum_probs=16.9
Q ss_pred CCCCcceeeeecCCceEEEE-EcCc
Q 023217 247 EGLQPCEVSELKAGTHIFAV-YGLN 270 (285)
Q Consensus 247 ~~~~~~~~~~~~~g~h~~~v-y~~n 270 (285)
+.=|+.....|.||+|.+.+ +||+
T Consensus 49 ~~Gqte~~I~L~PG~htLtl~~~d~ 73 (87)
T PF14347_consen 49 GKGQTELNIELPPGKHTLTLQLGDG 73 (87)
T ss_pred CCCEEEEEEEeCCCCEEEEEEeCCC
Confidence 44455555679999999985 5554
No 86
>PF12434 Malate_DH: Malate dehydrogenase enzyme
Probab=31.36 E-value=53 Score=19.87 Aligned_cols=17 Identities=29% Similarity=0.624 Sum_probs=14.5
Q ss_pred HHHHHHHHHHHHHHhCC
Q 023217 30 DQEIKTAYRKLALKYHP 46 (285)
Q Consensus 30 ~~eIk~ayrklal~~HP 46 (285)
.++.|.+-|+.||.||-
T Consensus 10 ~~~~r~~lR~AALeYHe 26 (28)
T PF12434_consen 10 KEDKRAQLRQAALEYHE 26 (28)
T ss_pred hHHHHHHHHHHHHHhcc
Confidence 36788999999999993
No 87
>PRK15216 putative fimbrial biosynthesis regulatory protein; Provisional
Probab=30.34 E-value=49 Score=31.51 Aligned_cols=31 Identities=13% Similarity=0.124 Sum_probs=25.6
Q ss_pred CCcceeeeecCCceEEEE-EcCcc-ceEEEEEE
Q 023217 249 LQPCEVSELKAGTHIFAV-YGLNC-KFYIFTFE 279 (285)
Q Consensus 249 ~~~~~~~~~~~g~h~~~v-y~~n~-~~~~~~~~ 279 (285)
=.+..++.|+|-+|+++. |+|+- ++.++|+-
T Consensus 58 ~~t~~vt~~~~sd~ivg~~~~d~vklkl~~~w~ 90 (340)
T PRK15216 58 SNSDVVTKLETSDHIIGMGPNDSVKLKLKVEWQ 90 (340)
T ss_pred ccCceeeccCccceEEeeCCCCeEEEEEEEEEe
Confidence 356788999999999999 99998 77776654
No 88
>PF07709 SRR: Seven Residue Repeat; InterPro: IPR011714 This repeat is found in some Plasmodium and Theileria proteins.
Probab=29.00 E-value=19 Score=18.17 Aligned_cols=13 Identities=38% Similarity=0.572 Sum_probs=8.8
Q ss_pred HHHhhhhhccccC
Q 023217 58 LFKEVAYSYSILS 70 (285)
Q Consensus 58 ~f~~i~~AY~vLs 70 (285)
+|..+..||+.|+
T Consensus 2 ~~~~V~~aY~~l~ 14 (14)
T PF07709_consen 2 KFEKVKNAYEQLS 14 (14)
T ss_pred cHHHHHHHHHhcC
Confidence 4667777777664
No 89
>PF12707 DUF3804: Protein of unknown function (DUF3804); InterPro: IPR024525 Structural alignments indicate that this family of functionally uncharacterised proteins carry an NTF2-fold with a hydrophobic cavity. Family members also contain two highly conserved tryptophan residues toward their C-terminal ends.; PDB: 3HZP_A.
Probab=28.77 E-value=54 Score=26.85 Aligned_cols=26 Identities=27% Similarity=0.307 Sum_probs=20.9
Q ss_pred eeeeecCCceEEEEEcCccceEEEEEE
Q 023217 253 EVSELKAGTHIFAVYGLNCKFYIFTFE 279 (285)
Q Consensus 253 ~~~~~~~g~h~~~vy~~n~~~~~~~~~ 279 (285)
+.++| .--|-|-+|++||-+|.||+-
T Consensus 58 e~sEl-~kIhrlE~l~~~~a~~~ftl~ 83 (128)
T PF12707_consen 58 ESSEL-IKIHRLEFLSDDWAMCAFTLG 83 (128)
T ss_dssp EEEEE-EEEEEEEESSSSEEEEEEEEE
T ss_pred eehhe-eeeeeEEecCCCeEEEEEEec
Confidence 44555 445999999999999999984
No 90
>PF10041 DUF2277: Uncharacterized conserved protein (DUF2277); InterPro: IPR018735 Members of this family of hypothetical bacterial proteins have no known function.
Probab=26.52 E-value=2.4e+02 Score=21.35 Aligned_cols=56 Identities=23% Similarity=0.131 Sum_probs=35.7
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCc--hHHH-HHHHhhhhhccccC
Q 023217 15 RRDPYEVLCVSRDSSDQEIKTAYRKLALKYHPDKNVSN--PEAA-ELFKEVAYSYSILS 70 (285)
Q Consensus 15 ~~d~Y~iLgv~~~as~~eIk~ayrklal~~HPDk~~~~--~~a~-~~f~~i~~AY~vLs 70 (285)
+++--.+-|+.|.||++||+.|-.+.++|..=-..|+. .+|- ..-.+|..|-..|.
T Consensus 2 CRnI~~L~~fePpaT~~EI~aAAlQyVRKvSG~~~Ps~an~eaF~~AV~eva~at~~LL 60 (78)
T PF10041_consen 2 CRNIKTLRNFEPPATDEEIRAAALQYVRKVSGFRKPSAANAEAFDRAVAEVAAATRRLL 60 (78)
T ss_pred CcchhhhcCCCCCCCHHHHHHHHHHHHHHHccCCCcchhhHHHHHHHHHHHHHHHHHHH
Confidence 45555677889999999999999888888765544432 2222 22344555544443
No 91
>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]
Probab=23.59 E-value=41 Score=32.58 Aligned_cols=24 Identities=25% Similarity=0.580 Sum_probs=20.0
Q ss_pred eeeeecCCceEEEEEcCccceEEE
Q 023217 253 EVSELKAGTHIFAVYGLNCKFYIF 276 (285)
Q Consensus 253 ~~~~~~~g~h~~~vy~~n~~~~~~ 276 (285)
.++.++||+|++++|--+.-.|+|
T Consensus 73 gVt~vkpGDhVI~~f~p~CG~C~~ 96 (366)
T COG1062 73 GVTSVKPGDHVILLFTPECGQCKF 96 (366)
T ss_pred CccccCCCCEEEEcccCCCCCCch
Confidence 567899999999999887766655
No 92
>PF07739 TipAS: TipAS antibiotic-recognition domain; InterPro: IPR012925 TipAL is a bacterial transcriptional regulator of the MerR family. The tipA gene can be expressed as a long form, TipAL, and a short form, TipAS, which constitutes the C-terminal part of TipAL. TipAS forms the antibiotic-recognition domain []. This domain, which has an alpha-helical globin-like fold, is also found at the C terminus of other MerR family transcription factors, including Mta, a central regulator of multidrug resistance in Bacillus subtilis [], and SkgA from Caulobacter crescentus []. ; GO: 0003677 DNA binding, 0045892 negative regulation of transcription, DNA-dependent; PDB: 1NY9_A 3HH0_A 3QAO_A.
Probab=23.55 E-value=68 Score=24.84 Aligned_cols=51 Identities=29% Similarity=0.468 Sum_probs=31.4
Q ss_pred cCCCCCC-HHHHHHHHHHHHHHhCCCCCCCchHHHHHHHhhhhhccccCCcccccccc-ccC
Q 023217 23 CVSRDSS-DQEIKTAYRKLALKYHPDKNVSNPEAAELFKEVAYSYSILSDPEKRRHYD-NAG 82 (285)
Q Consensus 23 gv~~~as-~~eIk~ayrklal~~HPDk~~~~~~a~~~f~~i~~AY~vLsdp~~R~~YD-~~G 82 (285)
|++|+.. ..+|-+.++.++..+++. + .+.+..|...| +.||.-+..|| .++
T Consensus 51 g~~p~s~evq~l~~~~~~~~~~~~~~----~---~~~~~~l~~~y--~~~~~~~~~~~~~~~ 103 (118)
T PF07739_consen 51 GVDPDSPEVQELAERWMELINQFTGG----D---PELLRGLAQMY--VEDPRFAAMYDKKFG 103 (118)
T ss_dssp T--TT-HHHHHHHHHHHHHHHHSS----------HHHHHHHHHHT--TSTHHHHHHHG-GGS
T ss_pred CCCcCCHHHHHHHHHHHHHHHHHhCC----C---HHHHHHHHHHH--HcCHHHHhhccccCC
Confidence 5566553 344667777777777662 2 35677788888 77888888887 544
No 93
>PF08308 PEGA: PEGA domain; InterPro: IPR013229 This domain is found in both archaea and bacteria and has similarity to S-layer (surface layer) proteins. It is named after the characteristic PEGA sequence motif found in this domain. The secondary structure of this domain is predicted to be beta-strands.
Probab=23.51 E-value=1.6e+02 Score=20.77 Aligned_cols=32 Identities=22% Similarity=0.260 Sum_probs=25.8
Q ss_pred CcceeeeecCCceEEEEEcCccceEEEEEEee
Q 023217 250 QPCEVSELKAGTHIFAVYGLNCKFYIFTFESY 281 (285)
Q Consensus 250 ~~~~~~~~~~g~h~~~vy~~n~~~~~~~~~~~ 281 (285)
.++....|.+|.|-+.|-=+.|....-++++.
T Consensus 25 tp~~~~~l~~G~~~v~v~~~Gy~~~~~~v~v~ 56 (71)
T PF08308_consen 25 TPLTLKDLPPGEHTVTVEKPGYEPYTKTVTVK 56 (71)
T ss_pred CcceeeecCCccEEEEEEECCCeeEEEEEEEC
Confidence 34555568899999999999998888777765
No 94
>KOG1690 consensus emp24/gp25L/p24 family of membrane trafficking proteins [Intracellular trafficking, secretion, and vesicular transport]
Probab=23.02 E-value=53 Score=29.32 Aligned_cols=25 Identities=12% Similarity=0.133 Sum_probs=17.9
Q ss_pred eeeeecCCceEEEEEc--Ccc-ceEEEE
Q 023217 253 EVSELKAGTHIFAVYG--LNC-KFYIFT 277 (285)
Q Consensus 253 ~~~~~~~g~h~~~vy~--~n~-~~~~~~ 277 (285)
.-+.+.||+|.||+|- ++| .+++-.
T Consensus 93 tFta~~~GeH~IC~~s~s~awf~~aklR 120 (215)
T KOG1690|consen 93 TFTALTPGEHRICIQSNSTAWFNGAKLR 120 (215)
T ss_pred EEEccCCCceEEEEecccchhhccceEE
Confidence 3457889999999985 378 455443
No 95
>COG1107 Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair]
Probab=22.03 E-value=53 Score=34.03 Aligned_cols=7 Identities=43% Similarity=0.909 Sum_probs=4.3
Q ss_pred eeecccc
Q 023217 222 VYRMDST 228 (285)
Q Consensus 222 ~~~~~~~ 228 (285)
+|.+++.
T Consensus 108 vy~l~~~ 114 (715)
T COG1107 108 VYVLDNS 114 (715)
T ss_pred eEEeccc
Confidence 6666654
No 96
>PRK00810 nifW nitrogenase stabilizing/protective protein; Provisional
Probab=20.46 E-value=1.2e+02 Score=24.58 Aligned_cols=12 Identities=25% Similarity=0.462 Sum_probs=7.5
Q ss_pred CCccccccCCCC
Q 023217 16 RDPYEVLCVSRD 27 (285)
Q Consensus 16 ~d~Y~iLgv~~~ 27 (285)
.+|++.|||+-+
T Consensus 19 Edff~ff~V~YD 30 (113)
T PRK00810 19 EEFFQLLGVPYD 30 (113)
T ss_pred HHHHHHhCCCCC
Confidence 466677777643
No 97
>KOG2589 consensus Histone tail methylase [Chromatin structure and dynamics]
Probab=20.07 E-value=63 Score=31.59 Aligned_cols=18 Identities=22% Similarity=0.552 Sum_probs=16.4
Q ss_pred eeeecCCceEEEEEcCcc
Q 023217 254 VSELKAGTHIFAVYGLNC 271 (285)
Q Consensus 254 ~~~~~~g~h~~~vy~~n~ 271 (285)
+.-|+||+-+-|.||+||
T Consensus 223 lRDIePGeEITcFYgs~f 240 (453)
T KOG2589|consen 223 LRDIEPGEEITCFYGSGF 240 (453)
T ss_pred hhcCCCCceeEEeecccc
Confidence 367999999999999999
Done!