Query 023217
Match_columns 285
No_of_seqs 270 out of 1811
Neff 6.5
Searched_HMMs 29240
Date Mon Mar 25 03:05:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023217.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/023217hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1bq0_A DNAJ, HSP40; chaperone, 99.9 1.2E-23 4E-28 165.9 6.2 74 15-88 2-75 (103)
2 3lz8_A Putative chaperone DNAJ 99.9 1.7E-23 5.9E-28 196.2 1.2 128 9-139 21-163 (329)
3 1hdj_A Human HSP40, HDJ-1; mol 99.9 1.3E-22 4.3E-27 151.7 4.7 74 15-89 2-75 (77)
4 2dn9_A DNAJ homolog subfamily 99.9 1.1E-22 3.9E-27 152.5 3.8 73 13-85 4-76 (79)
5 2ej7_A HCG3 gene; HCG3 protein 99.9 1.8E-22 6.3E-27 152.4 4.6 74 13-86 6-80 (82)
6 2ctw_A DNAJ homolog subfamily 99.8 3.4E-22 1.1E-26 159.3 4.9 80 8-87 9-88 (109)
7 2yua_A Williams-beuren syndrom 99.8 5.1E-22 1.7E-26 155.5 4.9 75 8-82 9-83 (99)
8 2ctr_A DNAJ homolog subfamily 99.8 7.4E-22 2.5E-26 151.3 4.3 75 14-89 5-79 (88)
9 2dmx_A DNAJ homolog subfamily 99.8 5.7E-22 2E-26 153.0 3.5 77 13-89 6-83 (92)
10 2ctq_A DNAJ homolog subfamily 99.8 5.7E-22 1.9E-26 158.6 3.4 76 11-86 15-90 (112)
11 2och_A Hypothetical protein DN 99.8 8.9E-22 3E-26 145.7 3.6 69 13-84 5-73 (73)
12 2ctp_A DNAJ homolog subfamily 99.8 8.9E-22 3.1E-26 147.4 3.6 72 13-85 4-75 (78)
13 2cug_A Mkiaa0962 protein; DNAJ 99.8 1.4E-21 4.8E-26 149.8 4.4 75 10-85 11-85 (88)
14 1wjz_A 1700030A21RIK protein; 99.8 1.3E-21 4.5E-26 151.3 3.4 75 9-83 9-89 (94)
15 2o37_A Protein SIS1; HSP40, J- 99.8 2.2E-21 7.6E-26 149.9 2.7 74 13-89 5-78 (92)
16 2lgw_A DNAJ homolog subfamily 99.8 2E-21 6.8E-26 152.4 2.2 73 16-88 2-75 (99)
17 3apq_A DNAJ homolog subfamily 99.8 2.4E-20 8.2E-25 162.2 2.7 73 16-88 2-74 (210)
18 2qsa_A DNAJ homolog DNJ-2; J-d 99.8 3.3E-20 1.1E-24 147.5 0.9 71 13-83 12-86 (109)
19 2l6l_A DNAJ homolog subfamily 99.7 3E-19 1E-23 150.2 3.5 71 13-83 7-83 (155)
20 2ys8_A RAB-related GTP-binding 99.7 4.5E-19 1.5E-23 136.5 3.7 62 15-77 26-87 (90)
21 1iur_A KIAA0730 protein; DNAJ 99.7 8.6E-19 2.9E-23 134.6 3.2 74 5-78 5-79 (88)
22 1gh6_A Large T antigen; tumor 99.7 2.6E-19 8.7E-24 143.8 -1.5 65 15-83 7-73 (114)
23 1faf_A Large T antigen; J doma 99.7 8.2E-19 2.8E-23 132.0 0.7 68 14-86 9-78 (79)
24 2pf4_E Small T antigen; PP2A, 99.7 3.8E-19 1.3E-23 152.5 -2.4 66 14-83 9-76 (174)
25 3hho_A CO-chaperone protein HS 99.7 6.7E-18 2.3E-22 144.9 2.1 67 15-81 3-76 (174)
26 1n4c_A Auxilin; four helix bun 99.7 1E-17 3.4E-22 144.5 2.7 64 15-78 116-182 (182)
27 3apo_A DNAJ homolog subfamily 99.7 4.9E-18 1.7E-22 173.7 -0.9 78 11-88 16-93 (780)
28 2qwo_B Putative tyrosine-prote 99.7 1.2E-17 4.1E-22 129.1 1.1 56 16-71 33-91 (92)
29 1fpo_A HSC20, chaperone protei 99.7 1.3E-17 4.3E-22 142.9 1.1 66 17-82 2-74 (171)
30 3bvo_A CO-chaperone protein HS 99.6 2.8E-17 9.5E-22 144.8 2.6 66 15-80 42-114 (207)
31 2guz_A Mitochondrial import in 99.6 6.2E-17 2.1E-21 119.2 2.3 62 11-76 9-71 (71)
32 3ag7_A Putative uncharacterize 99.6 5.2E-17 1.8E-21 128.8 1.5 59 14-73 39-104 (106)
33 3uo3_A J-type CO-chaperone JAC 99.6 1.5E-16 5E-21 137.4 1.3 66 14-82 9-81 (181)
34 2y4t_A DNAJ homolog subfamily 99.1 3.2E-11 1.1E-15 111.7 4.5 66 15-80 381-449 (450)
35 2guz_B Mitochondrial import in 98.8 7.5E-10 2.6E-14 80.0 1.7 53 15-71 3-58 (65)
36 1nlt_A Protein YDJ1, mitochond 98.2 3.5E-06 1.2E-10 75.6 8.0 86 114-212 10-108 (248)
37 2ctt_A DNAJ homolog subfamily 97.8 8E-06 2.8E-10 63.6 2.6 84 116-214 2-95 (104)
38 1exk_A DNAJ protein; extended 93.9 0.069 2.4E-06 38.6 4.5 59 140-212 16-76 (79)
39 2pzi_A Probable serine/threoni 88.8 0.16 5.3E-06 50.8 2.2 47 14-68 627-675 (681)
40 3lcz_A YCZA, inhibitor of trap 76.5 0.43 1.5E-05 32.4 -0.4 27 174-211 7-34 (53)
41 3agx_A DNAJ homolog subfamily 63.2 5 0.00017 33.5 3.3 37 115-162 2-38 (181)
42 2yib_D RNA-directed RNA polyme 37.8 9.5 0.00032 38.3 1.0 18 257-274 376-394 (770)
43 2pus_A IBDV VP1 RNA-dependant 36.5 13 0.00043 37.8 1.6 18 257-274 397-415 (852)
44 2yi9_A RNA-directed RNA polyme 34.9 12 0.00043 37.6 1.3 18 257-274 376-394 (799)
45 1qqr_A Streptokinase domain B; 30.6 36 0.0012 27.3 3.1 32 16-47 32-63 (138)
46 2bx9_A Anti-trap, AT, tryptoph 28.7 25 0.00087 23.4 1.7 18 193-210 15-33 (53)
No 1
>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A
Probab=99.89 E-value=1.2e-23 Score=165.94 Aligned_cols=74 Identities=43% Similarity=0.809 Sum_probs=70.0
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHhhhhhccccCCccccccccccCcccccc
Q 023217 15 RRDPYEVLCVSRDSSDQEIKTAYRKLALKYHPDKNVSNPEAAELFKEVAYSYSILSDPEKRRHYDNAGFEAIDA 88 (285)
Q Consensus 15 ~~d~Y~iLgv~~~as~~eIk~ayrklal~~HPDk~~~~~~a~~~f~~i~~AY~vLsdp~~R~~YD~~G~~~~~~ 88 (285)
..|||+||||+++|+.++||+|||+|++++|||++++++.+.++|++|++||++|+||.+|+.||.+|.+++..
T Consensus 2 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~~~ 75 (103)
T 1bq0_A 2 KQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAFEQ 75 (103)
T ss_dssp CCCSTTTTSSCSSCCHHHHHHHHHHHHTTTCTTTCTTTCTHHHHHHHHTTTTTSTTCSHHHHHTTTSTTTSSCS
T ss_pred CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHHhhhhhcc
Confidence 46999999999999999999999999999999999877889999999999999999999999999999888764
No 2
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A
Probab=99.86 E-value=1.7e-23 Score=196.22 Aligned_cols=128 Identities=29% Similarity=0.456 Sum_probs=19.4
Q ss_pred CCCCCCCCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHhhhhhccccCCccccccccccCcccccc
Q 023217 9 SSAPTIRRDPYEVLCVSRDSSDQEIKTAYRKLALKYHPDKNVSNPEAAELFKEVAYSYSILSDPEKRRHYDNAGFEAIDA 88 (285)
Q Consensus 9 ~~~~~~~~d~Y~iLgv~~~as~~eIk~ayrklal~~HPDk~~~~~~a~~~f~~i~~AY~vLsdp~~R~~YD~~G~~~~~~ 88 (285)
.+..+..+|||+||||+++|+.+|||+|||+||++||||++++ +.|.++|++|++||++|+||.+|+.||.++......
T Consensus 21 ~~~~m~~~d~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~-~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~~~~ 99 (329)
T 3lz8_A 21 QSNAMELKDYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSKE-NDAEAKFKDLAEAWEVLKDEQRRAEYDQLWQHRNDP 99 (329)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccccCHHHHcCcCCCCCHHHHHHHHHHHHHHHCCCCCCC-hHHHHHHHHHHHHHHHhhhhhhhcccchhhccccCC
Confidence 3445667899999999999999999999999999999999974 588999999999999999999999999985432111
Q ss_pred C-Cccc---cccccccccHHHHHHHhhcc-----------CCCCceeeechhhHHHHhCCceeEee
Q 023217 89 E-GMDM---EIDLSNLGTVNTMFAALFSK-----------LGVPIKTTISANVLEEALNGTVTVRP 139 (285)
Q Consensus 89 ~-~~~~---~~d~~~~g~~~~~F~~~F~~-----------~G~~i~~~i~~~~Lee~y~G~~~~~~ 139 (285)
+ +... ...+ +.+++.++|..||++ .|.++...+.+ +|+++|+|......
T Consensus 100 ~~~~~~~~~~~~f-~~~~f~diF~~~Fg~~g~~~~~~~~~~g~Dl~~~l~v-sleea~~G~~k~i~ 163 (329)
T 3lz8_A 100 GFGRQRQTHEQSY-SQQDFDDIFSSMFGQQAHQRRRQHAARGHDLEIEVAV-FLEETLAEQTRTIS 163 (329)
T ss_dssp --------------------------------------CCCCCCEEEEECC-CTTGGGSCEEEEEE
T ss_pred CcccccccccCCc-CCCchhhhhHhhhcCcCCCCCCCCcCCCCCEEEEEec-chhhhhhccceEEE
Confidence 0 0000 0001 112467889999874 35678888888 69999999875443
No 3
>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.86 E-value=1.3e-22 Score=151.68 Aligned_cols=74 Identities=50% Similarity=0.824 Sum_probs=68.6
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHhhhhhccccCCccccccccccCccccccC
Q 023217 15 RRDPYEVLCVSRDSSDQEIKTAYRKLALKYHPDKNVSNPEAAELFKEVAYSYSILSDPEKRRHYDNAGFEAIDAE 89 (285)
Q Consensus 15 ~~d~Y~iLgv~~~as~~eIk~ayrklal~~HPDk~~~~~~a~~~f~~i~~AY~vLsdp~~R~~YD~~G~~~~~~~ 89 (285)
..|||+||||+++|+.++||+|||+|++++|||++++ +.+.++|+.|++||++|+||.+|+.||.+|.+++..+
T Consensus 2 ~~~~y~iLgv~~~as~~~Ik~ayr~l~~~~HPD~~~~-~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~~~ 75 (77)
T 1hdj_A 2 GKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKE-PGAEEKFKEIAEAYDVLSDPRKREIFDRYGEEGLKGS 75 (77)
T ss_dssp CCCSHHHHTCCTTCCHHHHHHHHHHHHHTTCTTTCCC-TTHHHHHHHHHHHHHHTTCHHHHHHHHHTCGGGCCSS
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-ccHHHHHHHHHHHHHHHCCHHHHHHHHHHcccccccC
Confidence 3699999999999999999999999999999999974 6788999999999999999999999999998887543
No 4
>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.86 E-value=1.1e-22 Score=152.55 Aligned_cols=73 Identities=45% Similarity=0.713 Sum_probs=68.5
Q ss_pred CCCCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHhhhhhccccCCccccccccccCccc
Q 023217 13 TIRRDPYEVLCVSRDSSDQEIKTAYRKLALKYHPDKNVSNPEAAELFKEVAYSYSILSDPEKRRHYDNAGFEA 85 (285)
Q Consensus 13 ~~~~d~Y~iLgv~~~as~~eIk~ayrklal~~HPDk~~~~~~a~~~f~~i~~AY~vLsdp~~R~~YD~~G~~~ 85 (285)
....|||+||||+++|+.++||+|||+|++++|||++++++.+.++|+.|++||++|+||.+|+.||.+|..+
T Consensus 4 ~~~~~~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~ 76 (79)
T 2dn9_A 4 GSSGDYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDEVKRKQYDAYGSGP 76 (79)
T ss_dssp SCCSCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCSSCTTHHHHHHHHHHHHHHHHSHHHHHHHHHSCCCC
T ss_pred CCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHhccCcC
Confidence 3457999999999999999999999999999999999988889999999999999999999999999998654
No 5
>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.86 E-value=1.8e-22 Score=152.44 Aligned_cols=74 Identities=53% Similarity=0.706 Sum_probs=68.0
Q ss_pred CCCCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCch-HHHHHHHhhhhhccccCCccccccccccCcccc
Q 023217 13 TIRRDPYEVLCVSRDSSDQEIKTAYRKLALKYHPDKNVSNP-EAAELFKEVAYSYSILSDPEKRRHYDNAGFEAI 86 (285)
Q Consensus 13 ~~~~d~Y~iLgv~~~as~~eIk~ayrklal~~HPDk~~~~~-~a~~~f~~i~~AY~vLsdp~~R~~YD~~G~~~~ 86 (285)
....|||+||||+++|+.++||+|||+|++++|||++++++ .+.++|++|++||++|+||.+|+.||.+|..++
T Consensus 6 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~~ 80 (82)
T 2ej7_A 6 SGMVDYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSDAKKRDIYDRYGSGPS 80 (82)
T ss_dssp SSSCCHHHHTTCCTTCCHHHHHHHHHHHHTTSCTTTCSTTHHHHHHHHHHHHHHHHHHSSTTHHHHHHHTCCCSC
T ss_pred CCCcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHHCCHHHHHHHHHcCcccc
Confidence 34679999999999999999999999999999999998653 688899999999999999999999999997654
No 6
>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.85 E-value=3.4e-22 Score=159.29 Aligned_cols=80 Identities=45% Similarity=0.684 Sum_probs=73.7
Q ss_pred CCCCCCCCCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHhhhhhccccCCccccccccccCccccc
Q 023217 8 GSSAPTIRRDPYEVLCVSRDSSDQEIKTAYRKLALKYHPDKNVSNPEAAELFKEVAYSYSILSDPEKRRHYDNAGFEAID 87 (285)
Q Consensus 8 ~~~~~~~~~d~Y~iLgv~~~as~~eIk~ayrklal~~HPDk~~~~~~a~~~f~~i~~AY~vLsdp~~R~~YD~~G~~~~~ 87 (285)
.+.......++|+||||+++|+.++||+|||+|++++|||++++++.+.++|++|++||++|+||.+|+.||.+|..++.
T Consensus 9 ~r~~~~~~~~~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~g~~~~~ 88 (109)
T 2ctw_A 9 QRSLSTSGESLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDNPEAADKFKEINNAHAILTDATKRNIYDKYGSLGLY 88 (109)
T ss_dssp CCCTTSCSCCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTSTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHTCHHHHH
T ss_pred CcccCCCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHcCHHHHHHHHHhcccccc
Confidence 45556667899999999999999999999999999999999998889999999999999999999999999999977653
No 7
>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.85 E-value=5.1e-22 Score=155.54 Aligned_cols=75 Identities=32% Similarity=0.558 Sum_probs=69.1
Q ss_pred CCCCCCCCCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHhhhhhccccCCccccccccccC
Q 023217 8 GSSAPTIRRDPYEVLCVSRDSSDQEIKTAYRKLALKYHPDKNVSNPEAAELFKEVAYSYSILSDPEKRRHYDNAG 82 (285)
Q Consensus 8 ~~~~~~~~~d~Y~iLgv~~~as~~eIk~ayrklal~~HPDk~~~~~~a~~~f~~i~~AY~vLsdp~~R~~YD~~G 82 (285)
+....+...|||+||||+++|+.++||+|||+|+++||||++++++.+.++|++|++||+||+||.+|+.||...
T Consensus 9 ~~~~~~~~~~~Y~vLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~l 83 (99)
T 2yua_A 9 QGDCSYSRTALYDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGSAEAAERFTRISQAYVVLGSATLRRKYDRGL 83 (99)
T ss_dssp CCCCSSCSSHHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCSSCSHHHHHHHHHHHHHHHTTSHHHHHHHHHTC
T ss_pred CCCCCCCccCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHhc
Confidence 344456788999999999999999999999999999999999888899999999999999999999999999854
No 8
>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.84 E-value=7.4e-22 Score=151.33 Aligned_cols=75 Identities=41% Similarity=0.753 Sum_probs=69.6
Q ss_pred CCCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHhhhhhccccCCccccccccccCccccccC
Q 023217 14 IRRDPYEVLCVSRDSSDQEIKTAYRKLALKYHPDKNVSNPEAAELFKEVAYSYSILSDPEKRRHYDNAGFEAIDAE 89 (285)
Q Consensus 14 ~~~d~Y~iLgv~~~as~~eIk~ayrklal~~HPDk~~~~~~a~~~f~~i~~AY~vLsdp~~R~~YD~~G~~~~~~~ 89 (285)
...|||+||||+++|+.++||+|||+|++++|||+++ ++.+.++|++|++||++|+||.+|+.||.+|..++...
T Consensus 5 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~-~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~~~ 79 (88)
T 2ctr_A 5 SSGSYYDILGVPKSASERQIKKAFHKLAMKYHPDKNK-SPDAEAKFREIAEAYETLSDANRRKEYDTLGHSAFTSG 79 (88)
T ss_dssp CCCSHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCC-SHHHHHHHHHHHHHHHHHHSSHHHHHHHHTCHHHHTCS
T ss_pred CCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCC-ChHHHHHHHHHHHHHHHHCCHHHHHHHHHhCccccccC
Confidence 4579999999999999999999999999999999998 57889999999999999999999999999998876543
No 9
>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.84 E-value=5.7e-22 Score=153.02 Aligned_cols=77 Identities=48% Similarity=0.693 Sum_probs=70.2
Q ss_pred CCCCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCc-hHHHHHHHhhhhhccccCCccccccccccCccccccC
Q 023217 13 TIRRDPYEVLCVSRDSSDQEIKTAYRKLALKYHPDKNVSN-PEAAELFKEVAYSYSILSDPEKRRHYDNAGFEAIDAE 89 (285)
Q Consensus 13 ~~~~d~Y~iLgv~~~as~~eIk~ayrklal~~HPDk~~~~-~~a~~~f~~i~~AY~vLsdp~~R~~YD~~G~~~~~~~ 89 (285)
....|||+||||+++|+.++||+|||+|++++|||+++.+ +.+.++|++|++||++|+||.+|+.||.+|.+++...
T Consensus 6 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~~~ 83 (92)
T 2dmx_A 6 SGMANYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDSKKRSLYDRAGCDSWRAG 83 (92)
T ss_dssp CCCCCHHHHHTCCTTCCTTHHHHHHHHHHHHTCTTTCSSCSHHHHHHHHHHHHHHHHHHSHHHHHHHHHHCSCSSCCC
T ss_pred CCCcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcccccCC
Confidence 3467999999999999999999999999999999999865 4788999999999999999999999999998877543
No 10
>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.84 E-value=5.7e-22 Score=158.64 Aligned_cols=76 Identities=30% Similarity=0.437 Sum_probs=70.6
Q ss_pred CCCCCCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHhhhhhccccCCccccccccccCcccc
Q 023217 11 APTIRRDPYEVLCVSRDSSDQEIKTAYRKLALKYHPDKNVSNPEAAELFKEVAYSYSILSDPEKRRHYDNAGFEAI 86 (285)
Q Consensus 11 ~~~~~~d~Y~iLgv~~~as~~eIk~ayrklal~~HPDk~~~~~~a~~~f~~i~~AY~vLsdp~~R~~YD~~G~~~~ 86 (285)
..+...|||+||||+++|+.++||+|||+|++++||||+++++.|.++|++|++||++|+||.+|+.||.+|..++
T Consensus 15 ~~~~~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~~ 90 (112)
T 2ctq_A 15 RSEDTEDYYTLLGCDELSSVEQILAEFKVRALECHPDKHPENPKAVETFQKLQKAKEILTNEESRARYDHWRRSQM 90 (112)
T ss_dssp CCCCCCCHHHHTTCCTTSCHHHHHHHHHHHHHTTCTTTCTTCSTHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHTC
T ss_pred cccCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHhhhhcc
Confidence 3345689999999999999999999999999999999999888899999999999999999999999999987665
No 11
>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A
Probab=99.83 E-value=8.9e-22 Score=145.67 Aligned_cols=69 Identities=51% Similarity=0.804 Sum_probs=62.2
Q ss_pred CCCCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHhhhhhccccCCccccccccccCcc
Q 023217 13 TIRRDPYEVLCVSRDSSDQEIKTAYRKLALKYHPDKNVSNPEAAELFKEVAYSYSILSDPEKRRHYDNAGFE 84 (285)
Q Consensus 13 ~~~~d~Y~iLgv~~~as~~eIk~ayrklal~~HPDk~~~~~~a~~~f~~i~~AY~vLsdp~~R~~YD~~G~~ 84 (285)
....|||+||||+++|+.++||+|||+|++++|||+++++ .++|+.|++||++|+||.+|+.||.+|.+
T Consensus 5 ~~~~~~y~iLgl~~~a~~~eIk~ayr~l~~~~HPD~~~~~---~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~ 73 (73)
T 2och_A 5 VKETGYYDVLGVKPDASDNELKKAYRKMALKFHPDKNPDG---AEQFKQISQAYEVLSDEKKRQIYDQGGEE 73 (73)
T ss_dssp -CCCCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCTTC---HHHHHHHHHHHHHHTSHHHHHHHHHTC--
T ss_pred cCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCcCH---HHHHHHHHHHHHHHCCHHHHHHHHhcCCC
Confidence 3467999999999999999999999999999999999754 57899999999999999999999999853
No 12
>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.83 E-value=8.9e-22 Score=147.37 Aligned_cols=72 Identities=51% Similarity=0.856 Sum_probs=66.9
Q ss_pred CCCCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHhhhhhccccCCccccccccccCccc
Q 023217 13 TIRRDPYEVLCVSRDSSDQEIKTAYRKLALKYHPDKNVSNPEAAELFKEVAYSYSILSDPEKRRHYDNAGFEA 85 (285)
Q Consensus 13 ~~~~d~Y~iLgv~~~as~~eIk~ayrklal~~HPDk~~~~~~a~~~f~~i~~AY~vLsdp~~R~~YD~~G~~~ 85 (285)
....|||+||||+++|+.++||+|||+|++++|||+++ .+.+.++|+.|++||++|+||.+|+.||.+|..+
T Consensus 4 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~-~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~ 75 (78)
T 2ctp_A 4 GSSGDYYEILGVSRGASDEDLKKAYRRLALKFHPDKNH-APGATEAFKAIGTAYAVLSNPEKRKQYDQFGSGP 75 (78)
T ss_dssp SCSCCHHHHHTCCTTCCHHHHHHHHHHHHTTSCTTTCS-SHHHHHHHHHHHHHHHHHTSHHHHHHHHHTCSCS
T ss_pred CCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCC-CccHHHHHHHHHHHHHHHCCHHHHHHHHHcCccc
Confidence 34579999999999999999999999999999999997 4788999999999999999999999999998764
No 13
>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus}
Probab=99.83 E-value=1.4e-21 Score=149.81 Aligned_cols=75 Identities=47% Similarity=0.746 Sum_probs=68.4
Q ss_pred CCCCCCCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHhhhhhccccCCccccccccccCccc
Q 023217 10 SAPTIRRDPYEVLCVSRDSSDQEIKTAYRKLALKYHPDKNVSNPEAAELFKEVAYSYSILSDPEKRRHYDNAGFEA 85 (285)
Q Consensus 10 ~~~~~~~d~Y~iLgv~~~as~~eIk~ayrklal~~HPDk~~~~~~a~~~f~~i~~AY~vLsdp~~R~~YD~~G~~~ 85 (285)
.......|||+||||+++|+.++||+|||+|++++|||++++ +.+.++|++|++||++|+||.+|+.||.+|...
T Consensus 11 ~~~~~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~-~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~ 85 (88)
T 2cug_A 11 SLSALDFDPYRVLGVSRTASQADIKKAYKKLAREWHPDKNKD-PGAEDRFIQISKAYEILSNEEKRTNYDHYGSGP 85 (88)
T ss_dssp CCCSSSSCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCCS-TTHHHHHHHHHHHHHHHHSHHHHHHHHHHTTCC
T ss_pred hhccCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCC-hhHHHHHHHHHHHHHHHCCHHHHHHHHHcCCCC
Confidence 344557899999999999999999999999999999999974 678899999999999999999999999998653
No 14
>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1
Probab=99.83 E-value=1.3e-21 Score=151.26 Aligned_cols=75 Identities=29% Similarity=0.546 Sum_probs=67.3
Q ss_pred CCCCCCCCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCc------hHHHHHHHhhhhhccccCCccccccccccC
Q 023217 9 SSAPTIRRDPYEVLCVSRDSSDQEIKTAYRKLALKYHPDKNVSN------PEAAELFKEVAYSYSILSDPEKRRHYDNAG 82 (285)
Q Consensus 9 ~~~~~~~~d~Y~iLgv~~~as~~eIk~ayrklal~~HPDk~~~~------~~a~~~f~~i~~AY~vLsdp~~R~~YD~~G 82 (285)
....+...|||+||||+++|+.+|||+|||+|++++|||+++.+ +.+.++|++|++||+||+||.+|+.||...
T Consensus 9 ~~~~~~~~~~y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~l 88 (94)
T 1wjz_A 9 ALEQTLKKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNEETKKKYDLQR 88 (94)
T ss_dssp CCSSSSCSCHHHHTTCCTTCCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSSSHHHHHHHHS
T ss_pred ccccCCCCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCChhhhHHHHHHHHHHHHHHHHHCCHHHHHHHHHHc
Confidence 34446678999999999999999999999999999999998743 568899999999999999999999999865
Q ss_pred c
Q 023217 83 F 83 (285)
Q Consensus 83 ~ 83 (285)
.
T Consensus 89 ~ 89 (94)
T 1wjz_A 89 S 89 (94)
T ss_dssp C
T ss_pred c
Confidence 3
No 15
>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae}
Probab=99.82 E-value=2.2e-21 Score=149.91 Aligned_cols=74 Identities=45% Similarity=0.748 Sum_probs=67.7
Q ss_pred CCCCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHhhhhhccccCCccccccccccCccccccC
Q 023217 13 TIRRDPYEVLCVSRDSSDQEIKTAYRKLALKYHPDKNVSNPEAAELFKEVAYSYSILSDPEKRRHYDNAGFEAIDAE 89 (285)
Q Consensus 13 ~~~~d~Y~iLgv~~~as~~eIk~ayrklal~~HPDk~~~~~~a~~~f~~i~~AY~vLsdp~~R~~YD~~G~~~~~~~ 89 (285)
....|||+||||+++|+.++||+|||+|++++|||+++++ .++|++|++||++|+||.+|+.||.+|.+++...
T Consensus 5 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~---~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~~~~ 78 (92)
T 2o37_A 5 VKETKLYDLLGVSPSANEQELKKGYRKAALKYHPDKPTGD---TEKFKEISEAFEILNDPQKREIYDQYGLEAARSG 78 (92)
T ss_dssp CSCCHHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTSTTCC---HHHHHHHHHHHHHHTSHHHHHHHHHHCHHHHHTT
T ss_pred ccCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCh---HHHHHHHHHHHHHHCCHHHHHHHHHHCHHHhhcc
Confidence 4568999999999999999999999999999999999765 4689999999999999999999999998877643
No 16
>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens}
Probab=99.82 E-value=2e-21 Score=152.39 Aligned_cols=73 Identities=48% Similarity=0.707 Sum_probs=65.3
Q ss_pred CCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCc-hHHHHHHHhhhhhccccCCccccccccccCcccccc
Q 023217 16 RDPYEVLCVSRDSSDQEIKTAYRKLALKYHPDKNVSN-PEAAELFKEVAYSYSILSDPEKRRHYDNAGFEAIDA 88 (285)
Q Consensus 16 ~d~Y~iLgv~~~as~~eIk~ayrklal~~HPDk~~~~-~~a~~~f~~i~~AY~vLsdp~~R~~YD~~G~~~~~~ 88 (285)
.|||+||||+++|+.++||+|||+|++++|||+++++ +.+.++|+.|++||++|+||.+|+.||.+|.+++..
T Consensus 2 ~d~Y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~a~~~f~~I~~AY~vL~d~~~R~~YD~~g~~~~~~ 75 (99)
T 2lgw_A 2 ASYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKREIYDRYGREGLTG 75 (99)
T ss_dssp CCHHHHSSSCTTSCHHHHHHHHHHHHHHTSTTTCCSCCHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHC----
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcccccC
Confidence 5899999999999999999999999999999999865 468899999999999999999999999999877654
No 17
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.78 E-value=2.4e-20 Score=162.19 Aligned_cols=73 Identities=40% Similarity=0.699 Sum_probs=69.3
Q ss_pred CCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHhhhhhccccCCccccccccccCcccccc
Q 023217 16 RDPYEVLCVSRDSSDQEIKTAYRKLALKYHPDKNVSNPEAAELFKEVAYSYSILSDPEKRRHYDNAGFEAIDA 88 (285)
Q Consensus 16 ~d~Y~iLgv~~~as~~eIk~ayrklal~~HPDk~~~~~~a~~~f~~i~~AY~vLsdp~~R~~YD~~G~~~~~~ 88 (285)
+|||+||||+++|+.++||+|||+|++++||||++++++|.++|+.|++||++|+||.+|+.||.+|..++..
T Consensus 2 ~~~y~~l~~~~~a~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~~L~~~~~r~~yd~~~~~~~~~ 74 (210)
T 3apq_A 2 QNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLED 74 (210)
T ss_dssp CCHHHHHTCCTTCCHHHHHHHHHHHHHHHCGGGCTTCTTHHHHHHHHHHHHHHHTSHHHHHHHHHHTTTTCCT
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHhCCHHHHHHHHHhccccccc
Confidence 5899999999999999999999999999999999888899999999999999999999999999999877643
No 18
>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans}
Probab=99.77 E-value=3.3e-20 Score=147.45 Aligned_cols=71 Identities=35% Similarity=0.464 Sum_probs=65.7
Q ss_pred CCCCCccccccCCCCC-CHHHHHHHHHHHHHHhCCCCCCC---chHHHHHHHhhhhhccccCCccccccccccCc
Q 023217 13 TIRRDPYEVLCVSRDS-SDQEIKTAYRKLALKYHPDKNVS---NPEAAELFKEVAYSYSILSDPEKRRHYDNAGF 83 (285)
Q Consensus 13 ~~~~d~Y~iLgv~~~a-s~~eIk~ayrklal~~HPDk~~~---~~~a~~~f~~i~~AY~vLsdp~~R~~YD~~G~ 83 (285)
....|||+||||+++| +.++||+|||+|++++|||++++ .+.+.++|++|++||++|+||.+|+.||.+|.
T Consensus 12 ~~~~~~y~iLgv~~~a~s~~eIk~aYr~l~~~~HPDk~~~~~~~~~a~~~f~~i~~AY~~L~d~~~R~~YD~~~~ 86 (109)
T 2qsa_A 12 CGLENCYDVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYETLKDDEAKTNYDYYLD 86 (109)
T ss_dssp TTTSCHHHHTTCCGGGCCHHHHHHHHHHHHHHTCGGGCCSHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHH
T ss_pred cCCCCHHHHcCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccccHHHHHHHHHHHHHHHHHCCHHHHHHHHHhcc
Confidence 4467999999999999 99999999999999999999975 35788999999999999999999999999874
No 19
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}
Probab=99.75 E-value=3e-19 Score=150.25 Aligned_cols=71 Identities=31% Similarity=0.559 Sum_probs=64.5
Q ss_pred CCCCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCch------HHHHHHHhhhhhccccCCccccccccccCc
Q 023217 13 TIRRDPYEVLCVSRDSSDQEIKTAYRKLALKYHPDKNVSNP------EAAELFKEVAYSYSILSDPEKRRHYDNAGF 83 (285)
Q Consensus 13 ~~~~d~Y~iLgv~~~as~~eIk~ayrklal~~HPDk~~~~~------~a~~~f~~i~~AY~vLsdp~~R~~YD~~G~ 83 (285)
+..+|||+||||+++|+.++||+|||+|++++||||+++++ .|.++|+.|++||++|+||.+|+.||..+.
T Consensus 7 ~~~~~~y~iLgv~~~a~~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~a~~~f~~i~~Ay~~L~dp~~R~~Yd~~~~ 83 (155)
T 2l6l_A 7 MPKKDWYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKILGNEETKREYDLQRC 83 (155)
T ss_dssp CCCSHHHHHHTCCTTCCHHHHHHHHHHHHHHHSCCCCCCCCTTHHHHHHHHHHHHHHHHHHHSSSHHHHCHHHHHHH
T ss_pred CCCCChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHcc
Confidence 44579999999999999999999999999999999987653 467899999999999999999999998653
No 20
>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.74 E-value=4.5e-19 Score=136.50 Aligned_cols=62 Identities=35% Similarity=0.542 Sum_probs=58.3
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHhhhhhccccCCcccccc
Q 023217 15 RRDPYEVLCVSRDSSDQEIKTAYRKLALKYHPDKNVSNPEAAELFKEVAYSYSILSDPEKRRH 77 (285)
Q Consensus 15 ~~d~Y~iLgv~~~as~~eIk~ayrklal~~HPDk~~~~~~a~~~f~~i~~AY~vLsdp~~R~~ 77 (285)
..|||+||||+++|+.+|||+|||+|++++||||++ ++.+.++|++|++||++|+||.+|+.
T Consensus 26 ~~~~y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~-~~~~~~~f~~i~~Ay~~L~d~~~R~~ 87 (90)
T 2ys8_A 26 SKDSWDMLGVKPGASRDEVNKAYRKLAVLLHPDKCV-APGSEDAFKAVVNARTALLKNIKSGP 87 (90)
T ss_dssp CSSHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTTCC-CTTHHHHHHHHHHHHHHHHHHHCCSC
T ss_pred CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCC-CccHHHHHHHHHHHHHHHCCcccccC
Confidence 479999999999999999999999999999999997 46788999999999999999999875
No 21
>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.73 E-value=8.6e-19 Score=134.59 Aligned_cols=74 Identities=26% Similarity=0.281 Sum_probs=64.2
Q ss_pred CCCCCCCCCCCCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCc-hHHHHHHHhhhhhccccCCccccccc
Q 023217 5 KMEGSSAPTIRRDPYEVLCVSRDSSDQEIKTAYRKLALKYHPDKNVSN-PEAAELFKEVAYSYSILSDPEKRRHY 78 (285)
Q Consensus 5 ~~~~~~~~~~~~d~Y~iLgv~~~as~~eIk~ayrklal~~HPDk~~~~-~~a~~~f~~i~~AY~vLsdp~~R~~Y 78 (285)
...+.+..+...++|+||||+++|+.+|||+|||+|+++||||+++++ +.|.++|++|++||++|+|...|..+
T Consensus 5 ~~~~~~~~~~~~~~y~vLgv~~~as~~eIKkaYrkla~~~HPDk~~~~~~~a~~~F~~I~~AYevL~~~~~r~~~ 79 (88)
T 1iur_A 5 HHHLVPRGSILKEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLEKQAFLDQN 79 (88)
T ss_dssp CCCCCCSSSCHHHHHHHHHHTTSSCSHHHHHHHHHHHHHTCTTTSSSCHHHHHHHHHHHHHHHHHHHHHTTCSSS
T ss_pred CCCCCCCCccHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHHHHhhcccccc
Confidence 334455566678999999999999999999999999999999999876 46889999999999999998877443
No 22
>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1
Probab=99.72 E-value=2.6e-19 Score=143.85 Aligned_cols=65 Identities=25% Similarity=0.326 Sum_probs=60.8
Q ss_pred CCCccccccCCCCCCH--HHHHHHHHHHHHHhCCCCCCCchHHHHHHHhhhhhccccCCccccccccccCc
Q 023217 15 RRDPYEVLCVSRDSSD--QEIKTAYRKLALKYHPDKNVSNPEAAELFKEVAYSYSILSDPEKRRHYDNAGF 83 (285)
Q Consensus 15 ~~d~Y~iLgv~~~as~--~eIk~ayrklal~~HPDk~~~~~~a~~~f~~i~~AY~vLsdp~~R~~YD~~G~ 83 (285)
..++|+||||+++|+. ++||+|||+|++++||||+++ .++|++|++||+||+||.+|+.||.+|.
T Consensus 7 ~~~~Y~iLgv~~~as~~~~eIk~aYr~la~~~HPDk~~~----~e~f~~I~~AYevL~d~~~R~~~~~~~~ 73 (114)
T 1gh6_A 7 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD----EEKMKKMNTLYKKMEDGVKYAHQPDFGG 73 (114)
T ss_dssp HHHHHHHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTCCT----TTTTHHHHHHHHHHHHHHHSCCSSCCSC
T ss_pred hhhHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCCCCCcc----HHHHHHHHHHHHHHCCHHHHHHhhhccc
Confidence 4689999999999998 999999999999999999875 4789999999999999999999999884
No 23
>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1
Probab=99.71 E-value=8.2e-19 Score=131.99 Aligned_cols=68 Identities=22% Similarity=0.283 Sum_probs=60.3
Q ss_pred CCCCccccccCCCC--CCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHhhhhhccccCCccccccccccCcccc
Q 023217 14 IRRDPYEVLCVSRD--SSDQEIKTAYRKLALKYHPDKNVSNPEAAELFKEVAYSYSILSDPEKRRHYDNAGFEAI 86 (285)
Q Consensus 14 ~~~d~Y~iLgv~~~--as~~eIk~ayrklal~~HPDk~~~~~~a~~~f~~i~~AY~vLsdp~~R~~YD~~G~~~~ 86 (285)
...++|+||||+++ |+.++||+|||+|++++|||++++ .++|++|++||++|+|+.+|.. +.+|.+++
T Consensus 9 ~~~~~y~iLgl~~~~~a~~~eIk~aYr~la~~~HPDk~~~----~~~f~~i~~AYe~L~~~~~r~~-~~~g~~~~ 78 (79)
T 1faf_A 9 DKERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGS----HALMQELNSLWGTFKTEVYNLR-MNLGGTGF 78 (79)
T ss_dssp HHHHHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGSCC----HHHHHHHHHHHHHHHHHHHHHT-TCCSSCCC
T ss_pred hHHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCC----HHHHHHHHHHHHHHhhHHHHHH-HhcCCccC
Confidence 45689999999999 999999999999999999999863 5789999999999999999988 55776543
No 24
>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C
Probab=99.70 E-value=3.8e-19 Score=152.47 Aligned_cols=66 Identities=24% Similarity=0.288 Sum_probs=58.6
Q ss_pred CCCCccccccCCCCCC--HHHHHHHHHHHHHHhCCCCCCCchHHHHHHHhhhhhccccCCccccccccccCc
Q 023217 14 IRRDPYEVLCVSRDSS--DQEIKTAYRKLALKYHPDKNVSNPEAAELFKEVAYSYSILSDPEKRRHYDNAGF 83 (285)
Q Consensus 14 ~~~d~Y~iLgv~~~as--~~eIk~ayrklal~~HPDk~~~~~~a~~~f~~i~~AY~vLsdp~~R~~YD~~G~ 83 (285)
...|+|+||||+++|+ .+|||+|||++|+++||||+++ +++|++|++||++|+||.+|+.||++|.
T Consensus 9 ~~~d~Y~vLGl~~~as~~~~eIKkAYRkLa~~~HPDk~~~----~e~F~~I~~AYevLsdp~kR~~YD~~G~ 76 (174)
T 2pf4_E 9 ESLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD----EEKMKKMNTLYKKMEDGVKYAHQPDFGG 76 (174)
T ss_dssp HHHHHHHTTTCCGGGTTCHHHHHHHHHHHGGGCSCC---C----CTTTTHHHHHHHHHHHHHHHHTSCGGGG
T ss_pred ccccHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCcCCCCC----HHHHHHHHHHHHHhCCHHHHHHHhccCC
Confidence 4579999999999998 6999999999999999999875 3789999999999999999999999995
No 25
>3hho_A CO-chaperone protein HSCB homolog; structural genomics, IDP01304, center for structural genomics of infectious diseases, CSGI; 2.15A {Vibrio cholerae}
Probab=99.68 E-value=6.7e-18 Score=144.94 Aligned_cols=67 Identities=21% Similarity=0.400 Sum_probs=61.2
Q ss_pred CCCccccccCCCCCC--HHHHHHHHHHHHHHhCCCCCCCchH-----HHHHHHhhhhhccccCCcccccccccc
Q 023217 15 RRDPYEVLCVSRDSS--DQEIKTAYRKLALKYHPDKNVSNPE-----AAELFKEVAYSYSILSDPEKRRHYDNA 81 (285)
Q Consensus 15 ~~d~Y~iLgv~~~as--~~eIk~ayrklal~~HPDk~~~~~~-----a~~~f~~i~~AY~vLsdp~~R~~YD~~ 81 (285)
..|||+||||+++++ .++||+|||+|++++||||+++.+. |.++|+.|++||+||+||.+|+.||..
T Consensus 3 ~~d~Y~iLgl~~~a~id~~eIk~aYr~l~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~ 76 (174)
T 3hho_A 3 AMNYFELFGLPIQFELDGSLLSSQFRALQKRFHPDNFATASERDRLMAVQQAAQINDAYQTLKDPLRRAEYLLS 76 (174)
T ss_dssp -CCHHHHTTCCSSSCCCHHHHHHHHHHHHHHHCGGGSTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHH
T ss_pred CCCHHHHcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHH
Confidence 469999999999987 9999999999999999999986643 678999999999999999999999974
No 26
>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J
Probab=99.67 E-value=1e-17 Score=144.53 Aligned_cols=64 Identities=23% Similarity=0.424 Sum_probs=59.8
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCchH---HHHHHHhhhhhccccCCccccccc
Q 023217 15 RRDPYEVLCVSRDSSDQEIKTAYRKLALKYHPDKNVSNPE---AAELFKEVAYSYSILSDPEKRRHY 78 (285)
Q Consensus 15 ~~d~Y~iLgv~~~as~~eIk~ayrklal~~HPDk~~~~~~---a~~~f~~i~~AY~vLsdp~~R~~Y 78 (285)
..|+|+||||+++|+.++||+|||+|++++||||+++++. |.++|++|++||++|+||.+|+.|
T Consensus 116 ~~d~Y~vLgv~~~As~~eIKkAYRklal~~HPDK~~~~~~e~~A~~~F~~I~eAYevLsD~~kR~~Y 182 (182)
T 1n4c_A 116 GETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQKPLY 182 (182)
T ss_dssp TCCCCCCCCGGGGSSHHHHHHHHHHHHHHTCGGGGSSCTTHHHHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred ccchhhcCCCCCCCCHHHHHHHHHHHHHHHCcCcCCCcchHHHHHHHHHHHHHHHHHHCCHHhhhhC
Confidence 3699999999999999999999999999999999986553 889999999999999999999988
No 27
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.66 E-value=4.9e-18 Score=173.70 Aligned_cols=78 Identities=37% Similarity=0.636 Sum_probs=40.9
Q ss_pred CCCCCCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHhhhhhccccCCccccccccccCcccccc
Q 023217 11 APTIRRDPYEVLCVSRDSSDQEIKTAYRKLALKYHPDKNVSNPEAAELFKEVAYSYSILSDPEKRRHYDNAGFEAIDA 88 (285)
Q Consensus 11 ~~~~~~d~Y~iLgv~~~as~~eIk~ayrklal~~HPDk~~~~~~a~~~f~~i~~AY~vLsdp~~R~~YD~~G~~~~~~ 88 (285)
.....+|||+||||+++|+.+|||+|||+|++++||||+++++.|.++|++|++||++|+||.+|+.||++|.+++..
T Consensus 16 ~~~~~~~~y~~lg~~~~a~~~~i~~ay~~l~~~~hpd~~~~~~~~~~~f~~i~~ay~~L~~~~~r~~yd~~~~~~~~~ 93 (780)
T 3apo_A 16 EGRHDQNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLED 93 (780)
T ss_dssp -------CHHHHTCCTTCCHHHHHHHHCC-----------------------CTHHHHHHSHHHHHHHTTC-------
T ss_pred CCCCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHHcChHHHHHHHhhccccccc
Confidence 345578999999999999999999999999999999999888889999999999999999999999999999877643
No 28
>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A
Probab=99.65 E-value=1.2e-17 Score=129.13 Aligned_cols=56 Identities=23% Similarity=0.395 Sum_probs=51.9
Q ss_pred CCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCch---HHHHHHHhhhhhccccCC
Q 023217 16 RDPYEVLCVSRDSSDQEIKTAYRKLALKYHPDKNVSNP---EAAELFKEVAYSYSILSD 71 (285)
Q Consensus 16 ~d~Y~iLgv~~~as~~eIk~ayrklal~~HPDk~~~~~---~a~~~f~~i~~AY~vLsd 71 (285)
.++|++|||++.|+++|||+|||++|+++||||+++++ .|.++|++|++||+||.+
T Consensus 33 ~~~y~~Lgv~~~as~~eIKkAYRklal~~HPDK~~~~~~~~~A~~~F~~i~eAyevL~~ 91 (92)
T 2qwo_B 33 ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPCKATGQPYEQYAKMIFMELNDAWSEFEN 91 (92)
T ss_dssp CCSCCCCCGGGSSSHHHHHHHHHHHHHHTCHHHHTTSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCeecCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHhHHHHHHHHHHHHHHHHHh
Confidence 58899999999999999999999999999999998765 388899999999999974
No 29
>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1
Probab=99.65 E-value=1.3e-17 Score=142.86 Aligned_cols=66 Identities=21% Similarity=0.336 Sum_probs=60.9
Q ss_pred CccccccCCCCC--CHHHHHHHHHHHHHHhCCCCCCCch-----HHHHHHHhhhhhccccCCccccccccccC
Q 023217 17 DPYEVLCVSRDS--SDQEIKTAYRKLALKYHPDKNVSNP-----EAAELFKEVAYSYSILSDPEKRRHYDNAG 82 (285)
Q Consensus 17 d~Y~iLgv~~~a--s~~eIk~ayrklal~~HPDk~~~~~-----~a~~~f~~i~~AY~vLsdp~~R~~YD~~G 82 (285)
|||+||||++++ +.++||+|||+|+++|||||+++.+ .|.++|+.|++||+||+||.+|+.||...
T Consensus 2 d~y~lLgl~~~a~i~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~l 74 (171)
T 1fpo_A 2 DYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRAEYLLSL 74 (171)
T ss_dssp HHHHHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHT
T ss_pred CHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHh
Confidence 799999999999 9999999999999999999998754 35678999999999999999999999864
No 30
>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens}
Probab=99.65 E-value=2.8e-17 Score=144.76 Aligned_cols=66 Identities=21% Similarity=0.267 Sum_probs=60.0
Q ss_pred CCCccccccCCCC--CCHHHHHHHHHHHHHHhCCCCCCCch-----HHHHHHHhhhhhccccCCccccccccc
Q 023217 15 RRDPYEVLCVSRD--SSDQEIKTAYRKLALKYHPDKNVSNP-----EAAELFKEVAYSYSILSDPEKRRHYDN 80 (285)
Q Consensus 15 ~~d~Y~iLgv~~~--as~~eIk~ayrklal~~HPDk~~~~~-----~a~~~f~~i~~AY~vLsdp~~R~~YD~ 80 (285)
..|||+||||+++ ++.++||+|||+|++++||||+++++ .|.++|+.|++||+||+||.+|+.||.
T Consensus 42 ~~d~y~lLgv~~~~~a~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vLsdp~~R~~Yd~ 114 (207)
T 3bvo_A 42 TRDYFSLMDCNRSFRVDTAKLQHRYQQLQRLVHPDFFSQRSQTEKDFSEKHSTLVNDAYKTLLAPLSRGLYLL 114 (207)
T ss_dssp TCCHHHHTTSCSCSCCCHHHHHHHHHHHHHHHCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHH
T ss_pred CCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
Confidence 5799999999986 79999999999999999999998653 356789999999999999999999995
No 31
>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=99.63 E-value=6.2e-17 Score=119.20 Aligned_cols=62 Identities=18% Similarity=0.292 Sum_probs=54.5
Q ss_pred CCCCCCCccccccCCC-CCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHhhhhhccccCCccccc
Q 023217 11 APTIRRDPYEVLCVSR-DSSDQEIKTAYRKLALKYHPDKNVSNPEAAELFKEVAYSYSILSDPEKRR 76 (285)
Q Consensus 11 ~~~~~~d~Y~iLgv~~-~as~~eIk~ayrklal~~HPDk~~~~~~a~~~f~~i~~AY~vLsdp~~R~ 76 (285)
..+...++|+||||++ +|+.++||+|||+|++++|||++. + .++|++|++||++|+++..|+
T Consensus 9 ~~m~~~~~y~iLgl~~~~a~~~eIk~ayr~l~~~~HPDk~g-~---~~~f~~i~~Aye~L~~~~~rk 71 (71)
T 2guz_A 9 PKMNSKEALQILNLTENTLTKKKLKEVHRKIMLANHPDKGG-S---PFLATKINEAKDFLEKRGISK 71 (71)
T ss_dssp SSCCHHHHHHHTTCCTTTCCHHHHHHHHHHHHHHHCGGGTC-C---HHHHHHHHHHHHHHHHHCCCC
T ss_pred CCCCHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHCCCCCC-C---HHHHHHHHHHHHHHhhhhhcC
Confidence 3455679999999999 799999999999999999999974 3 368999999999999987764
No 32
>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana}
Probab=99.62 E-value=5.2e-17 Score=128.76 Aligned_cols=59 Identities=15% Similarity=0.209 Sum_probs=52.4
Q ss_pred CCCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCC---ch----HHHHHHHhhhhhccccCCcc
Q 023217 14 IRRDPYEVLCVSRDSSDQEIKTAYRKLALKYHPDKNVS---NP----EAAELFKEVAYSYSILSDPE 73 (285)
Q Consensus 14 ~~~d~Y~iLgv~~~as~~eIk~ayrklal~~HPDk~~~---~~----~a~~~f~~i~~AY~vLsdp~ 73 (285)
...|||+|||++. ||.++||+|||++++++||||+++ ++ .|+++|++|++||++|+|+.
T Consensus 39 ~~~d~Y~vl~~~~-As~~eIKkAYRklal~~HPDK~~~~~~~~e~~~~A~~~F~~I~~AYevLsd~~ 104 (106)
T 3ag7_A 39 SGSGWKPVPLMDM-IEGNAVRKSYQRALLILHPDKLQQKGASANQKYMAEKVFELLQEAWDHFNTLG 104 (106)
T ss_dssp TTSCCCCCCGGGS-CSHHHHHHHHHHHHHHHCHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred ccCCHHHHcCCCC-CCHHHHHHHHHHHHHHHCcCcCCCcccchhhHHHHHHHHHHHHHHHHHHcCcc
Confidence 3579999999996 999999999999999999999863 12 47889999999999999985
No 33
>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A
Probab=99.59 E-value=1.5e-16 Score=137.44 Aligned_cols=66 Identities=23% Similarity=0.373 Sum_probs=59.6
Q ss_pred CCCCccccc------cCCC-CCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHhhhhhccccCCccccccccccC
Q 023217 14 IRRDPYEVL------CVSR-DSSDQEIKTAYRKLALKYHPDKNVSNPEAAELFKEVAYSYSILSDPEKRRHYDNAG 82 (285)
Q Consensus 14 ~~~d~Y~iL------gv~~-~as~~eIk~ayrklal~~HPDk~~~~~~a~~~f~~i~~AY~vLsdp~~R~~YD~~G 82 (285)
...|||+|| |+++ +|+.++||+|||+|++++||||+++ +.++|+.|++||+||+||.+|+.||...
T Consensus 9 ~~~d~y~ll~~~~p~~~~~~~a~~~eIk~aYr~la~~~HPDk~~~---a~~~f~~i~~AY~vL~dp~~R~~Yd~~l 81 (181)
T 3uo3_A 9 FTSTFYELFPKTFPKKLPIWTIDQSRLRKEYRQLQAQHHPDMAQQ---GSEQSSTLNQAYHTLKDPLRRSQYMLKL 81 (181)
T ss_dssp CSCCTGGGCTTTCTTCSCCSCCCHHHHHHHHHHHHHTCCTTSCCS---CSSGGGSHHHHHHHHHSHHHHHHHHHHH
T ss_pred CCCCHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHhCcCCCcc---HHHHHHHHHHHHHHHcChHHHHHHHHHH
Confidence 356999999 4665 8999999999999999999999975 6788999999999999999999999843
No 34
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.11 E-value=3.2e-11 Score=111.74 Aligned_cols=66 Identities=44% Similarity=0.757 Sum_probs=56.5
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCc---hHHHHHHHhhhhhccccCCccccccccc
Q 023217 15 RRDPYEVLCVSRDSSDQEIKTAYRKLALKYHPDKNVSN---PEAAELFKEVAYSYSILSDPEKRRHYDN 80 (285)
Q Consensus 15 ~~d~Y~iLgv~~~as~~eIk~ayrklal~~HPDk~~~~---~~a~~~f~~i~~AY~vLsdp~~R~~YD~ 80 (285)
..++|++||+.+.++.++|+++|+++++++|||+.+.+ +.+.++|++|++||++|+||++|+.||.
T Consensus 381 ~~~~y~~lg~~~~~~~~~~~~~y~~~~l~~~pd~~~~~~~~~~a~~~~~~i~~ay~~L~d~~~r~~yd~ 449 (450)
T 2y4t_A 381 KRDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDPEMRKKFDD 449 (450)
T ss_dssp SCCSGGGSCSSTTCCTTHHHHHHHHHHHHSCGGGCCSHHHHHHHHHHHHHHHHHHHHSSGGGGC-----
T ss_pred chhHHHHhCCCccCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHHHHhCCHHHHHhccC
Confidence 35899999999999999999999999999999998764 3578899999999999999999999997
No 35
>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=98.83 E-value=7.5e-10 Score=79.97 Aligned_cols=53 Identities=15% Similarity=0.067 Sum_probs=45.3
Q ss_pred CCCccccccCCCC---CCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHhhhhhccccCC
Q 023217 15 RRDPYEVLCVSRD---SSDQEIKTAYRKLALKYHPDKNVSNPEAAELFKEVAYSYSILSD 71 (285)
Q Consensus 15 ~~d~Y~iLgv~~~---as~~eIk~ayrklal~~HPDk~~~~~~a~~~f~~i~~AY~vLsd 71 (285)
..+.|+||||+++ ++.++|+++||+|...+||||..+ ......|++|+++|..
T Consensus 3 ~~EA~~ILgv~~~~~~a~~~~Ik~~yr~Lm~~nhPDkGGS----~yl~~ki~~Ake~l~~ 58 (65)
T 2guz_B 3 LDESCKILNIEESKGDLNMDKINNRFNYLFEVNDKEKGGS----FYLQSKVYRAAERLKW 58 (65)
T ss_dssp HHHHHHHTTCCGGGTCCSHHHHHHHHHHHHHHTCGGGTCC----HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCCcCcCCHHHHHHHHHHHHHHhCCCCCCC----HHHHHHHHHHHHHHHH
Confidence 3467899999999 999999999999999999999754 3557789999998853
No 36
>1nlt_A Protein YDJ1, mitochondrial protein import protein MAS5; beta-strands, chaperone, heat shock, mitochondrion; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 g.54.1.1
Probab=98.18 E-value=3.5e-06 Score=75.58 Aligned_cols=86 Identities=23% Similarity=0.220 Sum_probs=65.1
Q ss_pred CCCCceeeechhhHHHHhCCceeEee--------cCCCCcccccccccccccccee--EEEEEccceeEEEEEecCcccc
Q 023217 114 LGVPIKTTISANVLEEALNGTVTVRP--------LPIGTSVSGKVEKQCAHFFGVT--INDQQAEAGIVVRVTSTAQSKF 183 (285)
Q Consensus 114 ~G~~i~~~i~~~~Lee~y~G~~~~~~--------l~~G~~~~~k~~k~c~~c~G~~--i~~~q~~~G~v~q~qs~~~~kf 183 (285)
.|.++...+.+ +|||+|+|.++... .|.|+++......+|..|.|.+ +..++.++ |+++++++|..
T Consensus 10 ~g~d~~~~l~v-slee~~~G~~k~i~~~r~~~C~~C~G~G~~~g~~~~C~~C~G~G~~~~~~~~g~-~~~~~~~~C~~-- 85 (248)
T 1nlt_A 10 RGKDIKHEISA-SLEELYKGRTAKLALNKQILCKECEGRGGKKGAVKKCTSCNGQGIKFVTRQMGP-MIQRFQTECDV-- 85 (248)
T ss_dssp BCCCEEEEEEE-CTTHHHHCEEEEEEEEEEEECTTTTTCSBSTTTCCCCTTSSSSSCEEEEEESSS-EEEEEECSCTT--
T ss_pred CCCCEEEEEEe-cHHHhcCCceEEEEeeEEEeCCCCcCccCCCCCCccCCCCCCCcEEEEEEecCc-eEEEEEEcCCC--
Confidence 46778888988 69999999876443 3568876433347899998664 44556666 88899999988
Q ss_pred hhcccccccCcceeee---eccccccCCceec
Q 023217 184 KLLYFEQDTNGGYGLA---LQEDSEKTGKVTS 212 (285)
Q Consensus 184 k~~~f~~~~cgG~g~~---~q~~s~c~~~~t~ 212 (285)
|+|.|.. .+.|..|.|+.+.
T Consensus 86 ---------C~G~G~~i~~~~~C~~C~G~g~~ 108 (248)
T 1nlt_A 86 ---------CHGTGDIIDPKDRCKSCNGKKVE 108 (248)
T ss_dssp ---------CSSSSSCCCTTSBCSSSTTSCEE
T ss_pred ---------CCCcCEEeccCCCCcccCCCceE
Confidence 9999944 5899999988754
No 37
>2ctt_A DNAJ homolog subfamily A member 3; ZING finger, beta-hairpin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.80 E-value=8e-06 Score=63.60 Aligned_cols=84 Identities=17% Similarity=0.162 Sum_probs=58.5
Q ss_pred CCceeeechhhHHHHhCCceeEee--------cCCCCccc-cccccccccccceeEEEEEccceeEEEEEecCcccchhc
Q 023217 116 VPIKTTISANVLEEALNGTVTVRP--------LPIGTSVS-GKVEKQCAHFFGVTINDQQAEAGIVVRVTSTAQSKFKLL 186 (285)
Q Consensus 116 ~~i~~~i~~~~Lee~y~G~~~~~~--------l~~G~~~~-~k~~k~c~~c~G~~i~~~q~~~G~v~q~qs~~~~kfk~~ 186 (285)
.++...+.+ +|||+|+|...... .|.|++.. +.....|+.|.|.+....+. |+++ ++++|+.
T Consensus 2 ~~~~~~l~v-slee~~~G~~~~i~~~~~~~C~~C~G~G~~~g~~~~~C~~C~G~G~~~~~~--G~~~-~~~~C~~----- 72 (104)
T 2ctt_A 2 SSGSSGMEL-TFNQAAKGVNKEFTVNIMDTCERCNGKGNEPGTKVQHCHYCGGSGMETINT--GPFV-MRSTCRR----- 72 (104)
T ss_dssp CCCCCCCCC-CCSSCCSSSCTTCCSSCCEECSSSSSSSSCTTCCCEECSSSSSSCEEEEEE--TTEE-EEEECSS-----
T ss_pred CceEEEEEE-EHHHHcCCCEEEEEeeeeeECCCCcCCccCCCCCCccCCCCCCCEEEEEEe--CCEE-EEEECCc-----
Confidence 345666777 69999999875433 35577653 23346799999886554443 5543 5678877
Q ss_pred ccccccCcceeee-eccccccCCceeccc
Q 023217 187 YFEQDTNGGYGLA-LQEDSEKTGKVTSAG 214 (285)
Q Consensus 187 ~f~~~~cgG~g~~-~q~~s~c~~~~t~~~ 214 (285)
|+|.|+. .+.|..|.++.+..+
T Consensus 73 ------C~G~G~~i~~~C~~C~G~G~v~~ 95 (104)
T 2ctt_A 73 ------CGGRGSIIISPCVVCRGAGQAKQ 95 (104)
T ss_dssp ------SSSSSEECSSCCSSSSSCSEECC
T ss_pred ------CCCcceECCCcCCCCCCeeEEEE
Confidence 9999966 789999999876544
No 38
>1exk_A DNAJ protein; extended beta-hairpin, CXXCXGXG, zinc-binding motif, chaperone; NMR {Escherichia coli} SCOP: g.54.1.1
Probab=93.87 E-value=0.069 Score=38.62 Aligned_cols=59 Identities=17% Similarity=0.231 Sum_probs=40.6
Q ss_pred cCCCCccc-cccccccccccceeEEEEEccceeEEEEEecCcccchhcccccccCcceeee-eccccccCCceec
Q 023217 140 LPIGTSVS-GKVEKQCAHFFGVTINDQQAEAGIVVRVTSTAQSKFKLLYFEQDTNGGYGLA-LQEDSEKTGKVTS 212 (285)
Q Consensus 140 l~~G~~~~-~k~~k~c~~c~G~~i~~~q~~~G~v~q~qs~~~~kfk~~~f~~~~cgG~g~~-~q~~s~c~~~~t~ 212 (285)
.+.|++.. ......|+.|.|.+...... |+++ ++++|.. |+|.|.. .+.|..|.+..+.
T Consensus 16 ~C~G~G~~~~~~~~~C~~C~G~G~~~~~~--g~~~-~~~~C~~-----------C~G~G~~~~~~C~~C~G~G~~ 76 (79)
T 1exk_A 16 VCHGSGAKPGTQPQTCPTCHGSGQVQMRQ--GFFA-VQQTCPH-----------CQGRGTLIKDPCNKCHGHGRV 76 (79)
T ss_dssp GGTTTSBCSSSCCEECTTTTTSSEEEEEE--TTEE-EEEECTT-----------TTTSSEECSSBCGGGTTSSEE
T ss_pred CCcccccCCCccCCCCCCCcCeEEEEEEc--CCCE-EeeECcC-----------CCCccEECCCcCCCCCCeEEE
Confidence 45576653 22345799998875543322 6664 7778877 9999966 6789999988754
No 39
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=88.85 E-value=0.16 Score=50.78 Aligned_cols=47 Identities=13% Similarity=0.128 Sum_probs=35.9
Q ss_pred CCCCccccccCCCCCCH--HHHHHHHHHHHHHhCCCCCCCchHHHHHHHhhhhhccc
Q 023217 14 IRRDPYEVLCVSRDSSD--QEIKTAYRKLALKYHPDKNVSNPEAAELFKEVAYSYSI 68 (285)
Q Consensus 14 ~~~d~Y~iLgv~~~as~--~eIk~ayrklal~~HPDk~~~~~~a~~~f~~i~~AY~v 68 (285)
..+|||.+||++.++.. .+|++|||++|+..+++ .+++..|..|+.|
T Consensus 627 ~~~~~~~~lG~~~~~~~lr~~~~~ayr~la~~~~~~--------~~r~~lvd~a~~v 675 (681)
T 2pzi_A 627 NKASTNHILGFPFTSHGLRLGVEASLRSLARVAPTQ--------RHRYTLVDMANKV 675 (681)
T ss_dssp CCCSSSEETTEESSHHHHHHHHHHHHHHHHHHCSSH--------HHHHHHHHHHHHH
T ss_pred cCCCCcccCCCCCChHHHHHHHHHHHHHHHHhCCCh--------HHHHHHHHHhccc
Confidence 35579999999776655 67999999999975544 3678788877765
No 40
>3lcz_A YCZA, inhibitor of trap, regulated by T-box (Trp) seque; anti-trap, tryptophan RNA-binding attenuation PROT transcription attenuation; 2.06A {Bacillus licheniformis} PDB: 3ld0_A
Probab=76.55 E-value=0.43 Score=32.42 Aligned_cols=27 Identities=19% Similarity=0.175 Sum_probs=21.7
Q ss_pred EEEecCcccchhcccccccCcceeee-eccccccCCcee
Q 023217 174 RVTSTAQSKFKLLYFEQDTNGGYGLA-LQEDSEKTGKVT 211 (285)
Q Consensus 174 q~qs~~~~kfk~~~f~~~~cgG~g~~-~q~~s~c~~~~t 211 (285)
+++++|+. |+|.|.. ...|+.|.|++.
T Consensus 7 q~~~~C~~-----------C~GsG~~i~~~C~~C~G~G~ 34 (53)
T 3lcz_A 7 DLETTCPN-----------CNGSGREEPEPCPKCLGKGV 34 (53)
T ss_dssp HHEEECTT-----------TTTSCEETTEECTTTTTSSE
T ss_pred ceeccCcC-----------CcccccCCCCcCCCCCCcEE
Confidence 56778877 9999966 788999998874
No 41
>3agx_A DNAJ homolog subfamily B member 1; chaperone; 1.85A {Homo sapiens} PDB: 3agy_A 3agz_A 2qld_A
Probab=63.22 E-value=5 Score=33.49 Aligned_cols=37 Identities=19% Similarity=0.266 Sum_probs=23.9
Q ss_pred CCCceeeechhhHHHHhCCceeEeecCCCCccccccccccccccceeE
Q 023217 115 GVPIKTTISANVLEEALNGTVTVRPLPIGTSVSGKVEKQCAHFFGVTI 162 (285)
Q Consensus 115 G~~i~~~i~~~~Lee~y~G~~~~~~l~~G~~~~~k~~k~c~~c~G~~i 162 (285)
+.++...+.+ +|||+|+|.++... +.+.|..|.|.++
T Consensus 2 ~~d~~~~l~i-slee~~~G~~k~i~----------i~~~c~~c~G~g~ 38 (181)
T 3agx_A 2 DPPVTHDLRV-SLEEIYSGCTKKMK----------ISHKRLNPDGKSI 38 (181)
T ss_dssp ----CEEEEE-CHHHHHHCEEEEEE----------EEEEEECTTSSCE
T ss_pred CCCEEEEEEE-EHHHhcCCcEEEEE----------EecccCCCCCceE
Confidence 4567778888 69999999986443 2345888877543
No 42
>2yib_D RNA-directed RNA polymerase; transferase, reverse transcriptase, IPNV; 3.80A {Infectious pancreatic necrosis virus}
Probab=37.77 E-value=9.5 Score=38.27 Aligned_cols=18 Identities=17% Similarity=0.281 Sum_probs=15.9
Q ss_pred ecCCceEEEEEcCcc-ceE
Q 023217 257 LKAGTHIFAVYGLNC-KFY 274 (285)
Q Consensus 257 ~~~g~h~~~vy~~n~-~~~ 274 (285)
|.|++|++=||+||| +++
T Consensus 376 l~~~e~~~lvYADN~YI~~ 394 (770)
T 2yib_D 376 LDNDEDLVMIYADNIYILQ 394 (770)
T ss_dssp HHTTCCEEEEETTEEEEEE
T ss_pred cCCCCceEEEEeccEEEEE
Confidence 679999999999999 654
No 43
>2pus_A IBDV VP1 RNA-dependant RNA polymerase; RNA polymerase motifs, transferase; 2.40A {Infectious bursal disease virus} PDB: 2qj1_A 2r70_A 2r72_A 2pgg_A
Probab=36.51 E-value=13 Score=37.81 Aligned_cols=18 Identities=22% Similarity=0.049 Sum_probs=15.7
Q ss_pred ecCCceEEEEEcCcc-ceE
Q 023217 257 LKAGTHIFAVYGLNC-KFY 274 (285)
Q Consensus 257 ~~~g~h~~~vy~~n~-~~~ 274 (285)
|.||+|++=||+||| +++
T Consensus 397 la~~~~~vlvYADN~YI~~ 415 (852)
T 2pus_A 397 LAPEEPKALVYADNIYIVH 415 (852)
T ss_dssp HSSCCSEEEEETTEEEEEE
T ss_pred hCCCCceEEEEeccEEEEe
Confidence 579999999999999 654
No 44
>2yi9_A RNA-directed RNA polymerase; transferase, reverse transcriptase, IPNV; 2.20A {Infectious pancreatic necrosis virus} PDB: 2yi8_A 2yia_A 2yib_A
Probab=34.93 E-value=12 Score=37.58 Aligned_cols=18 Identities=17% Similarity=0.281 Sum_probs=15.8
Q ss_pred ecCCceEEEEEcCcc-ceE
Q 023217 257 LKAGTHIFAVYGLNC-KFY 274 (285)
Q Consensus 257 ~~~g~h~~~vy~~n~-~~~ 274 (285)
|.||+|++=||+||| +++
T Consensus 376 l~~~e~~~lvYADN~YI~~ 394 (799)
T 2yi9_A 376 LDNDEDLVMIYADNIYILQ 394 (799)
T ss_dssp HHTTCCEEEEETTEEEEEE
T ss_pred cCCCCceEEEEeccEEEEe
Confidence 579999999999999 654
No 45
>1qqr_A Streptokinase domain B; non-proteolytic, plasminogen activation, fibrinolysis, hydrolase activator; 2.30A {Streptococcus dysgalactiae subsp} SCOP: d.15.5.1 PDB: 1c4p_A
Probab=30.63 E-value=36 Score=27.28 Aligned_cols=32 Identities=19% Similarity=0.293 Sum_probs=28.5
Q ss_pred CCccccccCCCCCCHHHHHHHHHHHHHHhCCC
Q 023217 16 RDPYEVLCVSRDSSDQEIKTAYRKLALKYHPD 47 (285)
Q Consensus 16 ~d~Y~iLgv~~~as~~eIk~ayrklal~~HPD 47 (285)
.-++..|-|....+.+|++++-..+..++||+
T Consensus 32 ~~~l~~k~ig~~Its~eL~~~AqeiL~q~hp~ 63 (138)
T 1qqr_A 32 TKLLKTLAIGDTITSQELLAQAQSILNKNHPG 63 (138)
T ss_dssp CEEEEEECTTCEEEHHHHHHHHHHHHHHHSTT
T ss_pred hhhhcccccCcccCHHHHHHHHHHHHHhcCCC
Confidence 34578888888999999999999999999998
No 46
>2bx9_A Anti-trap, AT, tryptophan RNA-binding attenuator protein-inhibit protein; transcription regulation; 2.80A {Bacillus subtilis} PDB: 2ko8_A* 2zp8_E* 2zp9_C*
Probab=28.74 E-value=25 Score=23.41 Aligned_cols=18 Identities=17% Similarity=-0.095 Sum_probs=9.1
Q ss_pred Ccceeee-eccccccCCce
Q 023217 193 NGGYGLA-LQEDSEKTGKV 210 (285)
Q Consensus 193 cgG~g~~-~q~~s~c~~~~ 210 (285)
|+|.|.. ...|..|.+..
T Consensus 15 C~GsG~~~~~~C~~C~G~G 33 (53)
T 2bx9_A 15 CERAGEIEGTPCPACSGKG 33 (53)
T ss_dssp TTTSSEETTEECTTTTTSS
T ss_pred CcceeccCCCCCccCCCCc
Confidence 5555533 34555555544
Done!