Query 023226
Match_columns 285
No_of_seqs 268 out of 2068
Neff 7.8
Searched_HMMs 46136
Date Fri Mar 29 02:27:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023226.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/023226hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0372 Serine/threonine speci 100.0 1.8E-84 3.9E-89 553.1 18.1 284 2-285 19-303 (303)
2 KOG0373 Serine/threonine speci 100.0 3.8E-77 8.3E-82 501.2 18.1 284 2-285 22-306 (306)
3 PTZ00239 serine/threonine prot 100.0 4.6E-74 9.9E-79 520.7 30.6 284 2-285 19-303 (303)
4 cd07415 MPP_PP2A_PP4_PP6 PP2A, 100.0 1.1E-73 2.4E-78 515.3 28.6 268 2-269 18-285 (285)
5 PTZ00480 serine/threonine-prot 100.0 1.1E-72 2.4E-77 513.2 29.7 269 2-271 35-304 (320)
6 cd07420 MPP_RdgC Drosophila me 100.0 1.9E-72 4.2E-77 512.4 28.8 264 2-266 23-321 (321)
7 KOG0374 Serine/threonine speci 100.0 5.5E-73 1.2E-77 516.9 23.3 267 2-268 35-303 (331)
8 cd07414 MPP_PP1_PPKL PP1, PPKL 100.0 1.4E-71 3E-76 503.5 26.6 266 2-268 26-292 (293)
9 PTZ00244 serine/threonine-prot 100.0 2.2E-71 4.7E-76 501.6 27.2 265 2-267 28-293 (294)
10 cd07416 MPP_PP2B PP2B, metallo 100.0 6.2E-71 1.3E-75 502.1 29.5 270 2-273 19-302 (305)
11 cd07417 MPP_PP5_C PP5, C-termi 100.0 5.8E-71 1.3E-75 503.4 28.1 275 2-277 32-313 (316)
12 smart00156 PP2Ac Protein phosp 100.0 1E-70 2.2E-75 493.9 29.0 266 2-268 4-270 (271)
13 KOG0371 Serine/threonine prote 100.0 1E-70 2.2E-75 471.7 16.4 283 3-285 37-319 (319)
14 cd07419 MPP_Bsu1_C Arabidopsis 100.0 9.5E-68 2.1E-72 483.0 28.5 266 2-267 24-311 (311)
15 cd07418 MPP_PP7 PP7, metalloph 100.0 1.6E-67 3.5E-72 486.9 29.0 270 2-271 38-370 (377)
16 KOG0375 Serine-threonine phosp 100.0 5.9E-66 1.3E-70 459.5 12.4 271 2-274 64-348 (517)
17 KOG0377 Protein serine/threoni 100.0 7E-55 1.5E-59 396.7 12.8 269 4-273 139-437 (631)
18 KOG0376 Serine-threonine phosp 100.0 5E-50 1.1E-54 371.9 13.2 273 6-279 190-469 (476)
19 cd00144 MPP_PPP_family phospho 100.0 9.6E-37 2.1E-41 266.4 22.4 214 29-253 1-224 (225)
20 PRK13625 bis(5'-nucleosyl)-tet 100.0 4.1E-28 8.9E-33 215.4 20.1 194 26-258 1-226 (245)
21 cd07425 MPP_Shelphs Shewanella 100.0 1.1E-27 2.3E-32 207.8 14.5 178 29-240 1-198 (208)
22 cd07423 MPP_PrpE Bacillus subt 99.9 4.4E-26 9.5E-31 201.1 18.9 123 26-150 1-143 (234)
23 cd07413 MPP_PA3087 Pseudomonas 99.9 8.7E-26 1.9E-30 197.7 17.3 116 29-147 2-143 (222)
24 PRK00166 apaH diadenosine tetr 99.9 1.2E-25 2.6E-30 202.1 18.0 226 26-267 1-268 (275)
25 cd07421 MPP_Rhilphs Rhilph pho 99.9 3.4E-25 7.4E-30 198.1 18.6 198 27-255 3-292 (304)
26 PHA02239 putative protein phos 99.9 4.7E-25 1E-29 194.2 17.1 174 26-240 1-220 (235)
27 PRK11439 pphA serine/threonine 99.9 5.1E-25 1.1E-29 192.3 15.3 179 25-241 16-208 (218)
28 cd07422 MPP_ApaH Escherichia c 99.9 3.1E-25 6.8E-30 197.4 12.8 121 28-152 1-127 (257)
29 cd07424 MPP_PrpA_PrpB PrpA and 99.9 4.4E-24 9.6E-29 184.9 19.2 170 26-225 1-184 (207)
30 TIGR00668 apaH bis(5'-nucleosy 99.9 3.7E-25 8.1E-30 197.5 12.0 122 26-151 1-128 (279)
31 PRK09968 serine/threonine-spec 99.9 2.4E-22 5.1E-27 175.5 14.4 117 25-147 14-144 (218)
32 PF00149 Metallophos: Calcineu 99.5 5.2E-13 1.1E-17 108.1 11.6 160 26-220 1-199 (200)
33 cd00841 MPP_YfcE Escherichia c 99.4 4.9E-12 1.1E-16 104.1 15.3 83 27-147 1-86 (155)
34 PRK09453 phosphodiesterase; Pr 99.4 1.3E-11 2.7E-16 104.8 14.3 69 26-98 1-77 (182)
35 TIGR00040 yfcE phosphoesterase 99.4 2.7E-11 5.9E-16 100.3 14.4 63 26-97 1-64 (158)
36 PF12850 Metallophos_2: Calcin 99.3 6.6E-11 1.4E-15 96.7 13.4 125 26-225 1-125 (156)
37 cd07379 MPP_239FB Homo sapiens 99.3 4.8E-11 1E-15 96.2 10.2 118 27-225 1-120 (135)
38 cd07397 MPP_DevT Myxococcus xa 99.2 2.5E-10 5.4E-15 100.5 12.8 157 27-221 2-208 (238)
39 cd07388 MPP_Tt1561 Thermus the 99.2 2.5E-09 5.4E-14 93.7 19.0 72 25-97 4-75 (224)
40 cd07394 MPP_Vps29 Homo sapiens 99.1 5.1E-09 1.1E-13 88.6 16.6 126 27-243 1-135 (178)
41 COG0639 ApaH Diadenosine tetra 99.0 8.6E-10 1.9E-14 88.5 7.7 143 99-242 3-154 (155)
42 cd07392 MPP_PAE1087 Pyrobaculu 98.9 2.9E-08 6.3E-13 83.5 14.0 65 28-98 1-66 (188)
43 cd00838 MPP_superfamily metall 98.9 1.5E-08 3.2E-13 79.1 10.0 117 29-225 1-119 (131)
44 COG2129 Predicted phosphoester 98.8 2.7E-07 5.9E-12 79.6 17.0 209 25-265 3-224 (226)
45 cd07404 MPP_MS158 Microscilla 98.8 8.1E-09 1.8E-13 85.9 6.8 67 28-97 1-68 (166)
46 cd07399 MPP_YvnB Bacillus subt 98.8 1.3E-07 2.8E-12 82.3 14.2 192 27-267 2-213 (214)
47 PRK05340 UDP-2,3-diacylglucosa 98.8 8.4E-08 1.8E-12 84.9 12.3 207 26-265 1-238 (241)
48 COG0622 Predicted phosphoester 98.8 4.8E-07 1E-11 76.1 15.9 159 26-268 2-166 (172)
49 cd07403 MPP_TTHA0053 Thermus t 98.7 1.8E-07 4E-12 74.9 10.4 107 29-225 1-107 (129)
50 cd07400 MPP_YydB Bacillus subt 98.7 5.3E-07 1.1E-11 73.0 12.5 117 28-225 1-129 (144)
51 TIGR01854 lipid_A_lpxH UDP-2,3 98.6 9.9E-08 2.1E-12 84.0 7.0 203 28-258 1-230 (231)
52 cd07385 MPP_YkuE_C Bacillus su 98.4 4.2E-07 9.1E-12 78.9 6.7 70 26-97 2-76 (223)
53 PRK04036 DNA polymerase II sma 98.4 7.6E-06 1.6E-10 80.0 15.1 72 25-98 243-344 (504)
54 cd07395 MPP_CSTP1 Homo sapiens 98.4 4.7E-05 1E-09 68.0 18.9 69 27-97 6-99 (262)
55 PRK11148 cyclic 3',5'-adenosin 98.4 3.9E-05 8.5E-10 69.2 17.9 69 25-97 14-98 (275)
56 PRK11340 phosphodiesterase Yae 98.4 8.3E-07 1.8E-11 80.0 6.9 71 25-97 49-125 (271)
57 cd07393 MPP_DR1119 Deinococcus 98.2 2.7E-05 5.8E-10 68.6 12.6 65 28-96 1-83 (232)
58 TIGR03729 acc_ester putative p 98.1 7E-06 1.5E-10 72.5 6.8 68 27-97 1-74 (239)
59 TIGR00619 sbcd exonuclease Sbc 98.0 1.2E-05 2.5E-10 71.9 6.7 72 26-97 1-88 (253)
60 cd07383 MPP_Dcr2 Saccharomyces 98.0 7.8E-05 1.7E-09 63.8 11.2 70 26-95 3-87 (199)
61 cd07396 MPP_Nbla03831 Homo sap 98.0 1.9E-05 4.1E-10 70.9 7.0 68 27-98 2-87 (267)
62 COG1409 Icc Predicted phosphoh 97.9 0.0015 3.2E-08 58.4 17.8 73 26-100 1-81 (301)
63 cd07402 MPP_GpdQ Enterobacter 97.9 3.3E-05 7.2E-10 67.7 6.8 67 27-97 1-83 (240)
64 PHA02546 47 endonuclease subun 97.9 2.5E-05 5.4E-10 72.8 6.2 71 26-97 1-89 (340)
65 cd00844 MPP_Dbr1_N Dbr1 RNA la 97.9 8.2E-05 1.8E-09 66.8 9.2 69 28-97 1-86 (262)
66 cd08165 MPP_MPPE1 human MPPE1 97.8 0.00011 2.3E-09 60.9 8.1 47 51-97 37-89 (156)
67 cd07391 MPP_PF1019 Pyrococcus 97.8 8.9E-05 1.9E-09 62.2 7.4 56 41-97 30-88 (172)
68 COG2908 Uncharacterized protei 97.8 0.0001 2.2E-09 64.4 7.8 197 30-259 2-229 (237)
69 TIGR00024 SbcD_rel_arch putati 97.7 0.00012 2.6E-09 64.2 7.3 69 26-98 15-103 (225)
70 PRK10966 exonuclease subunit S 97.7 8E-05 1.7E-09 71.0 6.6 71 26-97 1-87 (407)
71 cd07390 MPP_AQ1575 Aquifex aeo 97.7 8.1E-05 1.7E-09 62.2 5.8 66 28-98 1-83 (168)
72 cd00840 MPP_Mre11_N Mre11 nucl 97.7 7.4E-05 1.6E-09 64.5 5.4 72 27-99 1-91 (223)
73 PF06874 FBPase_2: Firmicute f 97.5 0.0024 5.2E-08 62.8 13.7 43 53-100 185-227 (640)
74 PF14582 Metallophos_3: Metall 97.5 0.0024 5.3E-08 55.6 11.8 72 25-97 5-102 (255)
75 TIGR00583 mre11 DNA repair pro 97.4 0.00032 6.9E-09 66.7 6.9 51 25-75 3-65 (405)
76 cd07386 MPP_DNA_pol_II_small_a 97.4 0.00035 7.6E-09 61.8 5.9 67 29-97 2-94 (243)
77 cd08166 MPP_Cdc1_like_1 unchar 97.3 0.0022 4.8E-08 55.0 10.2 46 52-97 42-93 (195)
78 KOG0376 Serine-threonine phosp 97.3 2E-05 4.4E-10 74.8 -2.6 236 3-243 19-299 (476)
79 cd00839 MPP_PAPs purple acid p 97.3 0.00025 5.5E-09 64.1 4.0 69 26-98 5-82 (294)
80 COG1408 Predicted phosphohydro 97.3 0.00061 1.3E-08 61.9 6.3 71 26-98 45-119 (284)
81 cd07398 MPP_YbbF-LpxH Escheric 97.2 0.00049 1.1E-08 59.3 5.1 28 197-224 177-204 (217)
82 cd07401 MPP_TMEM62_N Homo sapi 97.2 0.00086 1.9E-08 59.9 6.8 70 28-97 2-89 (256)
83 KOG3325 Membrane coat complex 97.2 0.0085 1.8E-07 48.7 11.5 127 28-242 3-135 (183)
84 cd08163 MPP_Cdc1 Saccharomyces 97.0 0.012 2.5E-07 52.8 11.5 25 195-219 202-226 (257)
85 cd00845 MPP_UshA_N_like Escher 96.9 0.0018 3.9E-08 57.3 6.0 65 27-96 2-81 (252)
86 COG4186 Predicted phosphoester 96.9 0.007 1.5E-07 49.7 8.3 67 28-98 6-87 (186)
87 cd07384 MPP_Cdc1_like Saccharo 96.7 0.0024 5.3E-08 53.5 5.0 49 49-97 42-100 (171)
88 cd07380 MPP_CWF19_N Schizosacc 96.5 0.0079 1.7E-07 49.5 6.5 119 29-220 1-121 (150)
89 cd07410 MPP_CpdB_N Escherichia 96.4 0.0051 1.1E-07 55.4 5.4 65 27-96 2-94 (277)
90 cd07387 MPP_PolD2_C PolD2 (DNA 96.3 0.1 2.2E-06 46.7 12.9 50 211-265 205-257 (257)
91 COG0420 SbcD DNA repair exonuc 96.3 0.0092 2E-07 56.5 6.5 72 26-98 1-89 (390)
92 PLN02533 probable purple acid 96.3 0.0055 1.2E-07 58.9 5.0 71 25-98 139-212 (427)
93 cd07408 MPP_SA0022_N Staphyloc 95.8 0.017 3.8E-07 51.5 5.6 65 27-96 2-81 (257)
94 cd07378 MPP_ACP5 Homo sapiens 95.6 0.032 7E-07 49.9 6.4 69 27-97 2-83 (277)
95 KOG2863 RNA lariat debranching 95.5 0.048 1E-06 50.5 7.3 62 195-256 204-266 (456)
96 COG1407 Predicted ICC-like pho 95.5 0.046 1E-06 48.1 6.7 102 24-149 18-141 (235)
97 cd00842 MPP_ASMase acid sphing 95.5 0.37 8.1E-06 43.6 13.1 61 39-99 53-124 (296)
98 cd08164 MPP_Ted1 Saccharomyces 95.5 0.027 5.9E-07 48.2 5.2 64 33-96 24-110 (193)
99 cd07412 MPP_YhcR_N Bacillus su 95.3 0.032 7E-07 50.7 5.6 66 27-97 2-88 (288)
100 COG1768 Predicted phosphohydro 95.0 0.052 1.1E-06 45.7 5.4 44 51-98 42-87 (230)
101 cd07409 MPP_CD73_N CD73 ecto-5 94.6 0.095 2.1E-06 47.4 6.5 65 27-96 2-93 (281)
102 cd07411 MPP_SoxB_N Thermus the 94.3 0.087 1.9E-06 47.1 5.6 64 27-96 2-94 (264)
103 COG1311 HYS2 Archaeal DNA poly 94.0 2.4 5.3E-05 41.0 14.7 52 211-267 420-472 (481)
104 PRK09419 bifunctional 2',3'-cy 93.0 0.15 3.3E-06 55.1 5.6 66 26-96 661-735 (1163)
105 TIGR00282 metallophosphoestera 92.8 0.29 6.2E-06 44.1 6.1 67 26-97 1-71 (266)
106 KOG1378 Purple acid phosphatas 92.7 0.19 4.1E-06 48.2 5.0 34 199-232 322-355 (452)
107 cd07406 MPP_CG11883_N Drosophi 92.6 0.25 5.5E-06 44.0 5.6 65 27-96 2-82 (257)
108 KOG3662 Cell division control 92.3 0.23 4.9E-06 47.2 5.0 72 25-96 48-143 (410)
109 cd07405 MPP_UshA_N Escherichia 92.0 0.21 4.6E-06 45.3 4.4 66 27-97 2-87 (285)
110 cd07382 MPP_DR1281 Deinococcus 90.3 0.82 1.8E-05 40.9 6.4 66 27-97 1-70 (255)
111 cd08162 MPP_PhoA_N Synechococc 89.6 0.59 1.3E-05 43.0 5.0 65 27-96 2-90 (313)
112 COG0737 UshA 5'-nucleotidase/2 89.4 0.48 1E-05 46.7 4.6 68 25-97 26-115 (517)
113 KOG3339 Predicted glycosyltran 89.2 3.5 7.6E-05 35.0 8.8 85 54-144 40-140 (211)
114 KOG1432 Predicted DNA repair e 89.1 1.6 3.6E-05 40.4 7.4 34 198-232 288-321 (379)
115 cd07407 MPP_YHR202W_N Saccharo 89.0 0.53 1.1E-05 42.7 4.2 67 26-97 6-97 (282)
116 KOG0918 Selenium-binding prote 87.9 0.014 3.1E-07 54.6 -6.8 193 53-257 48-250 (476)
117 PRK09420 cpdB bifunctional 2', 87.8 0.81 1.8E-05 46.4 5.0 68 24-96 24-121 (649)
118 PF04042 DNA_pol_E_B: DNA poly 87.4 0.9 2E-05 38.8 4.5 72 28-99 1-93 (209)
119 TIGR01390 CycNucDiestase 2',3' 87.3 0.84 1.8E-05 46.1 4.8 66 26-96 3-98 (626)
120 PRK09419 bifunctional 2',3'-cy 86.2 0.92 2E-05 49.2 4.7 66 26-96 42-138 (1163)
121 PRK11907 bifunctional 2',3'-cy 83.2 2 4.3E-05 44.8 5.3 66 26-96 116-212 (814)
122 COG3855 Fbp Uncharacterized pr 82.5 0.86 1.9E-05 43.8 2.1 41 54-99 192-232 (648)
123 KOG2476 Uncharacterized conser 82.3 4.1 9E-05 39.2 6.6 69 25-94 5-75 (528)
124 TIGR01530 nadN NAD pyrophospha 82.2 2.7 6E-05 41.8 5.8 65 27-96 2-93 (550)
125 PRK09558 ushA bifunctional UDP 81.8 2.1 4.6E-05 42.5 4.8 68 25-97 34-121 (551)
126 KOG3947 Phosphoesterases [Gene 81.6 2.1 4.5E-05 38.6 4.1 64 26-97 62-126 (305)
127 PTZ00422 glideosome-associated 80.7 2.6 5.5E-05 40.1 4.7 71 25-97 26-109 (394)
128 KOG2310 DNA repair exonuclease 76.6 5.6 0.00012 39.2 5.6 50 24-73 12-73 (646)
129 PRK09418 bifunctional 2',3'-cy 76.0 4.5 9.7E-05 42.0 5.1 67 25-96 39-141 (780)
130 PTZ00235 DNA polymerase epsilo 70.5 12 0.00027 34.1 6.0 73 25-97 27-122 (291)
131 PF06874 FBPase_2: Firmicute f 63.7 6.7 0.00015 39.3 3.2 70 197-268 507-586 (640)
132 KOG2679 Purple (tartrate-resis 61.6 15 0.00032 33.3 4.6 93 1-97 15-126 (336)
133 PF02875 Mur_ligase_C: Mur lig 47.8 42 0.0009 24.3 4.6 69 26-94 12-82 (91)
134 PF12641 Flavodoxin_3: Flavodo 47.5 1E+02 0.0022 25.4 7.3 53 29-81 2-67 (160)
135 PF10083 DUF2321: Uncharacteri 42.3 7.3 0.00016 32.0 -0.3 46 196-247 22-76 (158)
136 COG4320 Uncharacterized protei 40.0 24 0.00052 32.7 2.5 61 13-81 44-108 (410)
137 PF13258 DUF4049: Domain of un 38.1 34 0.00074 30.3 3.1 88 54-149 86-187 (318)
138 cd07382 MPP_DR1281 Deinococcus 37.1 31 0.00066 30.9 2.8 40 55-97 1-40 (255)
139 PF09949 DUF2183: Uncharacteri 36.5 1.1E+02 0.0023 23.3 5.3 36 48-89 59-94 (100)
140 PRK10773 murF UDP-N-acetylmura 35.5 1.3E+02 0.0029 28.9 7.1 66 26-92 325-392 (453)
141 PLN02965 Probable pheophorbida 34.9 1.5E+02 0.0033 25.5 6.9 21 199-219 59-81 (255)
142 TIGR00282 metallophosphoestera 34.0 37 0.00081 30.6 2.8 39 55-97 2-41 (266)
143 TIGR03729 acc_ester putative p 33.9 54 0.0012 28.4 3.8 29 195-223 195-223 (239)
144 smart00854 PGA_cap Bacterial c 31.2 1.1E+02 0.0023 26.7 5.3 35 205-241 201-235 (239)
145 COG3855 Fbp Uncharacterized pr 30.2 23 0.0005 34.4 0.9 65 198-264 515-589 (648)
146 cd07381 MPP_CapA CapA and rela 28.0 1.1E+02 0.0025 26.4 4.9 35 204-240 202-236 (239)
147 KOG3425 Uncharacterized conser 27.7 1.6E+02 0.0034 23.4 4.9 60 38-97 12-79 (128)
148 PF06490 FleQ: Flagellar regul 27.5 98 0.0021 23.6 3.9 64 27-97 1-81 (109)
149 COG1692 Calcineurin-like phosp 26.7 76 0.0016 28.4 3.4 66 26-96 1-70 (266)
150 KOG3770 Acid sphingomyelinase 22.6 1.5E+02 0.0033 29.7 5.0 63 39-101 195-267 (577)
151 cd00839 MPP_PAPs purple acid p 22.1 1.8E+02 0.0039 25.7 5.1 27 198-224 182-208 (294)
152 PF05413 Peptidase_C34: Putati 21.3 44 0.00096 24.3 0.8 8 88-95 81-88 (92)
153 cd07396 MPP_Nbla03831 Homo sap 21.1 1.9E+02 0.0042 25.5 5.0 48 199-250 205-253 (267)
154 PF12982 DUF3866: Protein of u 20.4 2.4E+02 0.0052 26.1 5.5 56 23-82 86-141 (320)
No 1
>KOG0372 consensus Serine/threonine specific protein phosphatase involved in glycogen accumulation, PP2A-related [Carbohydrate transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-84 Score=553.06 Aligned_cols=284 Identities=66% Similarity=1.231 Sum_probs=275.6
Q ss_pred HHHHHHHHHHHHHHhcCCCccccCCcEEEEecCCCCHHHHHHHHHhcCCCCCCcEEEeCCccCCCCChHHHHHHHHhccc
Q 023226 2 FQVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKV 81 (285)
Q Consensus 2 ~~~~~l~~~~~~il~~e~~~~~~~~~i~vvGDiHG~~~~l~~il~~~~~~~~~~~vflGD~vDrG~~s~evl~~l~~lk~ 81 (285)
+++.+||.+++++|.+|++++.++.|+.|+|||||++.||..+|+..|.+++.+|+|||||||||..|+|++.+|+.||+
T Consensus 19 ~eV~~LC~~~~eiL~~E~NV~~i~tPvtvcGDIHGQf~Dllelf~igG~~~~t~YLFLGDyVDRG~~SvEt~lLLl~lK~ 98 (303)
T KOG0372|consen 19 SEVKALCAKVREILVEESNVQRIDTPVTVCGDIHGQFYDLLELFRIGGDVPETNYLFLGDYVDRGYYSVETFLLLLALKV 98 (303)
T ss_pred HHHHHHHHHHHHHHhcCCCceecCCCcEEeecccchHHHHHHHHHhCCCCCCCceEeecchhccccchHHHHHHHHHHhh
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCcEEEeCCCchhhhhhhhhCChHHHHHHhCChhHHHHHHHHHhhCCceeEEeceEEEecCCCCCCCCchhhhhhccc
Q 023226 82 RYPQRITILRGNHESRQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDR 161 (285)
Q Consensus 82 ~~p~~v~~lrGNHE~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~l~vHgGi~~~~~~~~~i~~i~r 161 (285)
+||+++.+||||||.+.++..|||++||.+|||...+|+.+.+.|..||++|+|++++||||||+||++.+++||+.+.|
T Consensus 99 rYP~ritLiRGNHEsRqitqvYGFY~EclrKYG~~~vWr~c~eiFdyL~l~aiid~kifCVHGGlSP~i~~lDqIr~lDR 178 (303)
T KOG0372|consen 99 RYPDRITLIRGNHESRQITQVYGFYDECLRKYGSANVWRYCTEIFDYLSLAAIIDGKIFCVHGGLSPSIQTLDQIRVLDR 178 (303)
T ss_pred cCcceeEEeeccchhhhhhhhhhHHHHHHHHcCChHHHHHHHHHHHhhhHhheecCcEEEEcCCCCcchhhHHHHHHhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCccccccccCCCCCCCCccCCCCCccccCHHHHHHHHHHCCCeEEEeeceeeecceEEecCCeeEEEEecCCc
Q 023226 162 VQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMEGYNWGHEQKVVTIFSAPNY 241 (285)
Q Consensus 162 ~~~~~~~~~~~dllWsdp~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iirgH~~~~~G~~~~~~~~~itifSa~~y 241 (285)
..++|+++.++|+|||||.+..+|..||||.|+.||++++++|++.||+++|+|+||.+.+||.+.++++++||||||||
T Consensus 179 ~~Eiph~g~m~DllWSDPee~~g~~~SPRGaGylFG~dvv~~F~~~N~~~~I~RaHQLv~eGyk~~F~~~v~TVWSAPNY 258 (303)
T KOG0372|consen 179 KQEVPHDGAMCDLLWSDPEEGPGWGLSPRGAGYLFGEDVVESFLEANGLSLICRAHQLVMEGYKWHFDEKVVTVWSAPNY 258 (303)
T ss_pred cccCCCCCcchheeccCcccCCCcccCCCCccccccHHHHHHHHHhCChHHHHHHHHHHHhhHHHhcCCceEEEecCCch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCcEEEEEEcCCCCeEEEEEecCCCCCCCCCCCCC-CCCCC
Q 023226 242 CYRCGNMASILEVDDCKGHTFIQFEPAPRRGEPDVTRRT-PDYFL 285 (285)
Q Consensus 242 ~~~~~n~~a~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 285 (285)
|++|+|.||||.|+++....|..|++.|..++...++|. .+||+
T Consensus 259 CYrCGN~AsIl~lde~~~~~F~vFeaa~~~~~~~~~kk~~~~yFl 303 (303)
T KOG0372|consen 259 CYRCGNVAAILELDEDLDKDFRVFEAAPQESRGIPAKKPIADYFL 303 (303)
T ss_pred hhhcCChHHheeeccccCcceEeeecchhhhcCCcccCcchhhcC
Confidence 999999999999999999999999999988776555443 47875
No 2
>KOG0373 consensus Serine/threonine specific protein phosphatase involved in cell cycle control, PP2A-related [Cell cycle control, cell division, chromosome partitioning; Signal transduction mechanisms]
Probab=100.00 E-value=3.8e-77 Score=501.15 Aligned_cols=284 Identities=61% Similarity=1.132 Sum_probs=275.6
Q ss_pred HHHHHHHHHHHHHHhcCCCccccCCcEEEEecCCCCHHHHHHHHHhcCCCCCCcEEEeCCccCCCCChHHHHHHHHhccc
Q 023226 2 FQVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKV 81 (285)
Q Consensus 2 ~~~~~l~~~~~~il~~e~~~~~~~~~i~vvGDiHG~~~~l~~il~~~~~~~~~~~vflGD~vDrG~~s~evl~~l~~lk~ 81 (285)
.|+..||+.++++|..|.++.+++.|+.|+|||||++.||.++|+..|.-|+..|||+|||||||..|+|++.+|+.||.
T Consensus 22 ~elk~LCe~v~d~L~eEsNvqPV~tPVTvCGDIHGQFyDL~eLFrtgG~vP~tnYiFmGDfVDRGyySLEtfT~l~~Lka 101 (306)
T KOG0373|consen 22 NELKRLCEMVKDILMEESNVQPVSTPVTVCGDIHGQFYDLLELFRTGGQVPDTNYIFMGDFVDRGYYSLETFTLLLLLKA 101 (306)
T ss_pred HHHHHHHHHHHHHHhhhcCccccCCCeeEeeccchhHHHHHHHHHhcCCCCCcceEEeccccccccccHHHHHHHHHHhh
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCcEEEeCCCchhhhhhhhhCChHHHHHHhCChhHHHHHHHHHhhCCceeEEeceEEEecCCCCCCCCchhhhhhccc
Q 023226 82 RYPQRITILRGNHESRQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDR 161 (285)
Q Consensus 82 ~~p~~v~~lrGNHE~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~l~vHgGi~~~~~~~~~i~~i~r 161 (285)
+||.++.+||||||.+.+...|||++||..|||....|+...+.|..|+++|+|+++++|||||+||++.+++||+.+.|
T Consensus 102 ryP~~ITLlRGNHEsRqitqVYGFydECq~KYGnan~wkycckVFD~LtlaAiID~~vLCVHGGLSPdirtlDqir~i~R 181 (306)
T KOG0373|consen 102 RYPAKITLLRGNHESRQITQVYGFYDECQNKYGNANVWKYCCKVFDFLTLAAIIDEKVLCVHGGLSPDIRTLDQIRLIER 181 (306)
T ss_pred cCCceeEEeeccchhhhhhhhhhhHHHHHhhcCCchHHHHHHHHHhhhhHHHHhcCcEEEEcCCCCccceeHHHHHhHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCccccccccCCCCCCCCccCCCCCccccCHHHHHHHHHHCCCeEEEeeceeeecceEEecCCe-eEEEEecCC
Q 023226 162 VQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMEGYNWGHEQK-VVTIFSAPN 240 (285)
Q Consensus 162 ~~~~~~~~~~~dllWsdp~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iirgH~~~~~G~~~~~~~~-~itifSa~~ 240 (285)
-.++|.++.+||++||||.+.+.|..|+||+|++||++++++|...|++++|.|+||.+.+||.+.++.+ ++|||||||
T Consensus 182 ~qEiPh~G~fcDlmWSDPedve~W~vSpRGAGwlFGskVt~eF~~iN~L~LicRaHQLV~EG~KymF~eK~lvTVWSAPN 261 (306)
T KOG0373|consen 182 NQEIPHEGPFCDLMWSDPEDVETWAVSPRGAGWLFGSKVTTEFNHINNLNLICRAHQLVQEGFKYMFDEKGLVTVWSAPN 261 (306)
T ss_pred hccCCCCCCccceeccChhhhhhheeCCCCcceeechhhhHHHHhccchHHHHhHHHHHHhhHHhccCCCCEEEEecCCc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999887 999999999
Q ss_pred ccccCCCcEEEEEEcCCCCeEEEEEecCCCCCCCCCCCCCCCCCC
Q 023226 241 YCYRCGNMASILEVDDCKGHTFIQFEPAPRRGEPDVTRRTPDYFL 285 (285)
Q Consensus 241 y~~~~~n~~a~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (285)
||++|+|.||||.++++++.+++.|.+.|..++-...+....||+
T Consensus 262 YCYRCGNvAsi~~~d~~~~r~~k~F~avpd~~~~~p~r~~~pYFl 306 (306)
T KOG0373|consen 262 YCYRCGNVASIMSFDDNLERETKIFSAVPDNSRVIPPRTRAPYFL 306 (306)
T ss_pred hhhhccCeeeEEEecccCCccceeeeecCCccccCCCCCCCCCcC
Confidence 999999999999999999999999999998877666666667775
No 3
>PTZ00239 serine/threonine protein phosphatase 2A; Provisional
Probab=100.00 E-value=4.6e-74 Score=520.66 Aligned_cols=284 Identities=56% Similarity=1.094 Sum_probs=267.5
Q ss_pred HHHHHHHHHHHHHHhcCCCccccCCcEEEEecCCCCHHHHHHHHHhcCCCCCCcEEEeCCccCCCCChHHHHHHHHhccc
Q 023226 2 FQVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKV 81 (285)
Q Consensus 2 ~~~~~l~~~~~~il~~e~~~~~~~~~i~vvGDiHG~~~~l~~il~~~~~~~~~~~vflGD~vDrG~~s~evl~~l~~lk~ 81 (285)
+++.+||++|+++|++||++++++.+++|+||||||+.+|.++|+..+..+.++++|||||||||++|+|++.+|+++|.
T Consensus 19 ~~i~~l~~~~~~il~~e~~~~~i~~~i~vvGDIHG~~~~L~~l~~~~~~~~~~~~lfLGDyVDRG~~s~evl~ll~~lk~ 98 (303)
T PTZ00239 19 RDLKLICERAKEIFLEESNVQPVRAPVNVCGDIHGQFYDLQALFKEGGDIPNANYIFIGDFVDRGYNSVETMEYLLCLKV 98 (303)
T ss_pred HHHHHHHHHHHHHHHhCCCeEecCCCEEEEEeCCCCHHHHHHHHHhcCCCCCceEEEeeeEcCCCCCHHHHHHHHHHhhh
Confidence 58999999999999999999999999999999999999999999999988899999999999999999999999999999
Q ss_pred cCCCcEEEeCCCchhhhhhhhhCChHHHHHHhCChhHHHHHHHHHhhCCceeEEeceEEEecCCCCCCCCchhhhhhccc
Q 023226 82 RYPQRITILRGNHESRQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDR 161 (285)
Q Consensus 82 ~~p~~v~~lrGNHE~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~l~vHgGi~~~~~~~~~i~~i~r 161 (285)
.+|.++++||||||.+.++..|||..|+..+|+...+|+.+.++|++||++++++++++|||||++|...++++++.+.|
T Consensus 99 ~~p~~v~llrGNHE~~~~~~~~gf~~e~~~ky~~~~~~~~~~~~f~~LPlaaii~~~i~cvHgGi~p~~~~l~~i~~i~r 178 (303)
T PTZ00239 99 KYPGNITLLRGNHESRQCTQVYGFYEEILRKYGNSNPWRLFMDVFDCLPLAALIEGQILCVHGGLSPDMRTIDQIRTIDR 178 (303)
T ss_pred cCCCcEEEEecccchHHHhhhcChHHHHHHHhcChhHHHHHHHHHHhCchheEEcCeEEEEcCccCcccccHhhhccccC
Confidence 99999999999999999999999999999999877899999999999999999999999999999999999999999999
Q ss_pred cccCCCCCccccccccCCCCCCCCccCCCCCccccCHHHHHHHHHHCCCeEEEeeceeeecceEEecCC-eeEEEEecCC
Q 023226 162 VQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMEGYNWGHEQ-KVVTIFSAPN 240 (285)
Q Consensus 162 ~~~~~~~~~~~dllWsdp~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iirgH~~~~~G~~~~~~~-~~itifSa~~ 240 (285)
+.+.|.++.++|++||||.+..+|.+++||.|++||++++++||++|++++||||||++++||++.+++ +++||||||+
T Consensus 179 ~~~~~~~~~~~dllWsDP~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~He~~~~G~~~~~~~~~~iTvfSa~~ 258 (303)
T PTZ00239 179 KIEIPHEGPFCDLMWSDPEEVEYWAVNSRGAGYLFGAKVTKEFCRLNDLTLICRAHQLVMEGYKYWFPDQNLVTVWSAPN 258 (303)
T ss_pred CCCCCCCCCceeeEecCccccCCCccCCCCCccccCHHHHHHHHHHCCCcEEEEcChhhccceEEEeCCCeEEEEECCCc
Confidence 999999999999999999988899999999999999999999999999999999999999999987654 5999999999
Q ss_pred ccccCCCcEEEEEEcCCCCeEEEEEecCCCCCCCCCCCCCCCCCC
Q 023226 241 YCYRCGNMASILEVDDCKGHTFIQFEPAPRRGEPDVTRRTPDYFL 285 (285)
Q Consensus 241 y~~~~~n~~a~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (285)
||+..+|+||+|.++++.+++|++|+|.+....+...+..+.||+
T Consensus 259 Y~~~~~N~~ail~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (303)
T PTZ00239 259 YCYRCGNIASILCLDENLQQTWKTFKEVPESAKSINPKNVLPYFL 303 (303)
T ss_pred ccCCCCceEEEEEECCCCcEeeEEeeCCCcccccCcccCCCCCCC
Confidence 999999999999999999999999999987644433344456764
No 4
>cd07415 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain. PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2
Probab=100.00 E-value=1.1e-73 Score=515.30 Aligned_cols=268 Identities=76% Similarity=1.334 Sum_probs=260.6
Q ss_pred HHHHHHHHHHHHHHhcCCCccccCCcEEEEecCCCCHHHHHHHHHhcCCCCCCcEEEeCCccCCCCChHHHHHHHHhccc
Q 023226 2 FQVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKV 81 (285)
Q Consensus 2 ~~~~~l~~~~~~il~~e~~~~~~~~~i~vvGDiHG~~~~l~~il~~~~~~~~~~~vflGD~vDrG~~s~evl~~l~~lk~ 81 (285)
+++.+||++|+++|++||++++++.+++|+||||||+.+|.++|+..+.++.+++||||||||||++|+|++.+++++|.
T Consensus 18 ~~~~~l~~~~~~il~~e~~~~~i~~~i~vvGDIHG~~~dL~~ll~~~~~~~~~~~lfLGDyVDRG~~s~evl~ll~~lk~ 97 (285)
T cd07415 18 SEVKSLCEKAKEILVKESNVQRVRSPVTVCGDIHGQFYDLLELFRVGGDPPDTNYLFLGDYVDRGYYSVETFLLLLALKV 97 (285)
T ss_pred HHHHHHHHHHHHHHHhCCCEEecCCCEEEEEeCCCCHHHHHHHHHHcCCCCCCeEEEEeEECCCCcCHHHHHHHHHHHhh
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCcEEEeCCCchhhhhhhhhCChHHHHHHhCChhHHHHHHHHHhhCCceeEEeceEEEecCCCCCCCCchhhhhhccc
Q 023226 82 RYPQRITILRGNHESRQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDR 161 (285)
Q Consensus 82 ~~p~~v~~lrGNHE~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~l~vHgGi~~~~~~~~~i~~i~r 161 (285)
.+|.++++||||||.+.++..|||..|+..+|+...+|+.+.++|++||++|+++++++||||||+|...++++++.++|
T Consensus 98 ~~p~~v~llrGNHE~~~~~~~ygf~~e~~~~y~~~~l~~~~~~~f~~lPlaaii~~~i~cvHgGi~p~~~~~~~i~~i~r 177 (285)
T cd07415 98 RYPDRITLLRGNHESRQITQVYGFYDECLRKYGNANVWKYCTDLFDYLPLAALIDNQIFCVHGGLSPSIDTLDQIRAIDR 177 (285)
T ss_pred cCCCcEEEEecccchHhhhhhcchhHHHHHhcCchHHHHHHHHHHHHhHHHhEeCCeEEEEcCCCCCCcccHHHhhcccC
Confidence 99999999999999999999999999999999877899999999999999999999999999999999999999999999
Q ss_pred cccCCCCCccccccccCCCCCCCCccCCCCCccccCHHHHHHHHHHCCCeEEEeeceeeecceEEecCCeeEEEEecCCc
Q 023226 162 VQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMEGYNWGHEQKVVTIFSAPNY 241 (285)
Q Consensus 162 ~~~~~~~~~~~dllWsdp~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iirgH~~~~~G~~~~~~~~~itifSa~~y 241 (285)
+.+.|.++.++|++||||.+..+|.+++||.|+.||++++++||++|++++||||||++++||++.++++++||||||+|
T Consensus 178 ~~~~~~~~~~~dllWsDP~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~He~~~~G~~~~~~~~~~TvfSa~~y 257 (285)
T cd07415 178 FQEVPHEGPMCDLLWSDPDDIEGWGISPRGAGYLFGQDVVEEFNHNNGLTLICRAHQLVMEGYQWMFDDKLVTVWSAPNY 257 (285)
T ss_pred CCCCCCCCCccceEecCCCccCCCCcCCCCCccccCHHHHHHHHHHCCCeEEEEcCccccceEEEecCCcEEEEecCCcc
Confidence 99999999999999999998889999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCcEEEEEEcCCCCeEEEEEecCC
Q 023226 242 CYRCGNMASILEVDDCKGHTFIQFEPAP 269 (285)
Q Consensus 242 ~~~~~n~~a~l~i~~~~~~~~~~~~~~~ 269 (285)
|+..+|+||+|.|+++++++|++|+|.|
T Consensus 258 ~~~~~n~~a~l~i~~~~~~~~~~~~~~~ 285 (285)
T cd07415 258 CYRCGNVASIMELDEHLKRSFKVFEAAP 285 (285)
T ss_pred cCCCCceEEEEEECCCCcEeEEEeccCC
Confidence 9999999999999999999999999865
No 5
>PTZ00480 serine/threonine-protein phosphatase; Provisional
Probab=100.00 E-value=1.1e-72 Score=513.22 Aligned_cols=269 Identities=46% Similarity=0.937 Sum_probs=260.3
Q ss_pred HHHHHHHHHHHHHHhcCCCccccCCcEEEEecCCCCHHHHHHHHHhcCCCCCCcEEEeCCccCCCCChHHHHHHHHhccc
Q 023226 2 FQVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKV 81 (285)
Q Consensus 2 ~~~~~l~~~~~~il~~e~~~~~~~~~i~vvGDiHG~~~~l~~il~~~~~~~~~~~vflGD~vDrG~~s~evl~~l~~lk~ 81 (285)
+|+.+||++|+++|++||++++++.+++|||||||++.+|.++|+..++++.+++||||||||||++++|++.+++++|+
T Consensus 35 ~~i~~l~~~~~~il~~ep~ll~i~~~i~vvGDIHG~~~dL~~l~~~~g~~~~~~ylfLGDyVDRG~~s~evl~ll~~lki 114 (320)
T PTZ00480 35 AEVRGLCIKARDIFISQPILLELEAPLKICGDVHGQYFDLLRLFEYGGYPPESNYLFLGDYVDRGKQSLETICLLLAYKI 114 (320)
T ss_pred HHHHHHHHHHHHHHHhCCceEecCCCeEEEeecccCHHHHHHHHHhcCCCCcceEEEeceecCCCCCcHHHHHHHHHhcc
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCcEEEeCCCchhhhhhhhhCChHHHHHHhCChhHHHHHHHHHhhCCceeEEeceEEEecCCCCCCCCchhhhhhccc
Q 023226 82 RYPQRITILRGNHESRQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDR 161 (285)
Q Consensus 82 ~~p~~v~~lrGNHE~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~l~vHgGi~~~~~~~~~i~~i~r 161 (285)
.+|.++++||||||...++..|||..|+..+|+ ..+|..+.++|.+||++|+|++++|||||||+|...++++++.+.|
T Consensus 115 ~~p~~v~llRGNHE~~~~~~~ygF~~e~~~~y~-~~l~~~~~~~F~~LPlaAiI~~~i~cvHGGI~p~~~~l~~i~~i~r 193 (320)
T PTZ00480 115 KYPENFFLLRGNHECASINRIYGFYDECKRRYT-IKLWKTFTDCFNCLPVAALIDEKILCMHGGLSPELSNLEQIRRIMR 193 (320)
T ss_pred cCCCceEEEecccchhhhhhhcchHHHHHhhcC-HHHHHHHHHHHHhccHhheecCcEEEEcCCcCcccCCHHHHhcccC
Confidence 999999999999999999999999999999995 6799999999999999999999999999999999999999999999
Q ss_pred cccCCCCCccccccccCCCC-CCCCccCCCCCccccCHHHHHHHHHHCCCeEEEeeceeeecceEEecCCeeEEEEecCC
Q 023226 162 VQEVPHEGPMCDLLWSDPDD-RCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMEGYNWGHEQKVVTIFSAPN 240 (285)
Q Consensus 162 ~~~~~~~~~~~dllWsdp~~-~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iirgH~~~~~G~~~~~~~~~itifSa~~ 240 (285)
|.+.|.++.++|++||||.. ..+|.+++||.|++||++++++||++|++++||||||++++||++.++++|+||||||+
T Consensus 194 p~~~~~~~~~~dllWSDP~~~~~~~~~s~RG~g~~FG~~~~~~Fl~~n~l~~IiR~Hq~v~~G~~~~~~~~~iTvFSa~~ 273 (320)
T PTZ00480 194 PTDVPDTGLLCDLLWSDPDKDVQGWADNERGVSYVFSQEIVQVFLKKHELDLICRAHQVVEDGYEFFSKRQLVTLFSAPN 273 (320)
T ss_pred CCCCCccchhhheeecCcccccCCCccCCCCCccccCHHHHHHHHHhCCCcEEEEcCccccCceEEeCCCcEEEEeCCcc
Confidence 99999999999999999986 57899999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCcEEEEEEcCCCCeEEEEEecCCCC
Q 023226 241 YCYRCGNMASILEVDDCKGHTFIQFEPAPRR 271 (285)
Q Consensus 241 y~~~~~n~~a~l~i~~~~~~~~~~~~~~~~~ 271 (285)
||+..+|.||+|.|++++.++|++|+|.+..
T Consensus 274 Y~~~~~N~ga~l~i~~~~~~~~~~~~p~~~~ 304 (320)
T PTZ00480 274 YCGEFDNAGSMMTIDESLMCSFQILKPAEQG 304 (320)
T ss_pred cCCCCCccEEEEEECCCCcEeEEEecCCccc
Confidence 9999999999999999999999999987655
No 6
>cd07420 MPP_RdgC Drosophila melanogaster RdgC and related proteins, metallophosphatase domain. RdgC (retinal degeneration C) is a vertebrate serine-threonine protein phosphatase that is required to prevent light-induced retinal degeneration. In addition to its catalytic domain, RdgC has two C-terminal EF hands. Homologs of RdgC include the human phosphatases protein phosphatase with EF hands 1 and -2 (PPEF-1 and -2). PPEF-1 transcripts are present at low levels in the retina, PPEF-2 transcripts and PPEF-2 protein are present at high levels in photoreceptors. The PPP (phosphoprotein phosphatase) family, to which RdgC belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all
Probab=100.00 E-value=1.9e-72 Score=512.39 Aligned_cols=264 Identities=33% Similarity=0.635 Sum_probs=242.6
Q ss_pred HHHHHHHHHHHHHHhcCCCccccCC----cEEEEecCCCCHHHHHHHHHhcCCCC-CCcEEEeCCccCCCCChHHHHHHH
Q 023226 2 FQVRVLCEKAKEILMDESNVQPVKS----PVTICGDIHGQFHDLAELFRIGGKCP-DTNYLFMGDYVDRGYYSVETVTLL 76 (285)
Q Consensus 2 ~~~~~l~~~~~~il~~e~~~~~~~~----~i~vvGDiHG~~~~l~~il~~~~~~~-~~~~vflGD~vDrG~~s~evl~~l 76 (285)
+++.+||++|+++|++||++++++. |++||||||||+.+|.++|+..+.++ .+++||||||||||++|+||+.+|
T Consensus 23 ~~i~~L~~~a~~il~~ep~vl~i~~~~~~~~~vvGDiHG~~~dL~~il~~~g~~~~~~~~lFLGDyVDRG~~s~Evl~ll 102 (321)
T cd07420 23 KYVLLILREARKVLKQLPNISRVSTSISKQVTICGDLHGKLDDLFLIFYKNGLPSPENPYVFNGDFVDRGKRSIEILIIL 102 (321)
T ss_pred HHHHHHHHHHHHHHHhCCCEEEecCCCCCCeEEEEeCCCCHHHHHHHHHHcCCCCccceEEEeccccCCCCCcHHHHHHH
Confidence 5789999999999999999998875 89999999999999999999999875 467999999999999999999999
Q ss_pred HhccccCCCcEEEeCCCchhhhhhhhhCChHHHHHHhCC--hhHHHHHHHHHhhCCceeEEeceEEEecCCCCCCCCchh
Q 023226 77 VSLKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGN--ANVWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLD 154 (285)
Q Consensus 77 ~~lk~~~p~~v~~lrGNHE~~~~~~~~~f~~e~~~~~~~--~~~~~~~~~~~~~lP~~~~i~~~~l~vHgGi~~~~~~~~ 154 (285)
++||+.+|+++++||||||.+.++..|||.+|+..+|+. ..+|+.+.++|++||++|+|++++|||||||++ ..+++
T Consensus 103 ~~lk~~~p~~v~llRGNHE~~~~~~~yGf~~e~~~~y~~~~~~l~~~~~~~F~~LPlaaii~~~i~cvHGGi~~-~~~l~ 181 (321)
T cd07420 103 FAFFLVYPNEVHLNRGNHEDHIMNLRYGFTKEVMSKYKLHGKKILRLLEDVFSWLPLATIIDNKILVVHGGISD-STDLD 181 (321)
T ss_pred HHHhhcCCCcEEEecCchhhhhhhhhcChHHHHHHHhCccHHHHHHHHHHHHHhCCceEEEcCCEEEEeCCCCC-ccCHH
Confidence 999999999999999999999999999999999999974 679999999999999999999999999999986 46889
Q ss_pred hhhhcccccc-----CCC----------------------CCccccccccCCCCCCC-CccCCCCCccccCHHHHHHHHH
Q 023226 155 NIRNFDRVQE-----VPH----------------------EGPMCDLLWSDPDDRCG-WGISPRGAGYTFGQDISEQFNH 206 (285)
Q Consensus 155 ~i~~i~r~~~-----~~~----------------------~~~~~dllWsdp~~~~~-~~~~~rg~~~~fg~~~~~~fl~ 206 (285)
+++.++|+.. .|. .+.+.|+|||||.+..+ |.+++||.|++||++++++||+
T Consensus 182 ~i~~i~r~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~dlLWSDP~~~~~~~~~~~RG~g~~FG~~~~~~Fl~ 261 (321)
T cd07420 182 LLDKIDRHKYVSVLRPPLRKGMEELTGEEEDPSEPLDKTEWRQILDILWSDPKAQKGCKPNTFRGGGCYFGPDVTSKVLQ 261 (321)
T ss_pred HHHhhhccccccccCCCccccccccccccccccccccccccchhheeeecCCccCCCCCccCCCCCccccCHHHHHHHHH
Confidence 9998887421 111 03578999999987555 6677899999999999999999
Q ss_pred HCCCeEEEeeceeeecceEEecCCeeEEEEecCCccccCCCcEEEEEEcCCCCeEEEEEe
Q 023226 207 TNNLKLIARAHQLVMEGYNWGHEQKVVTIFSAPNYCYRCGNMASILEVDDCKGHTFIQFE 266 (285)
Q Consensus 207 ~~~~~~iirgH~~~~~G~~~~~~~~~itifSa~~y~~~~~n~~a~l~i~~~~~~~~~~~~ 266 (285)
+|++++||||||++.+||++.++++++||||||+||+..+|+||+|.|+++++++|.+|.
T Consensus 262 ~n~l~~IIR~He~v~~G~~~~~~~~~iTvFSa~nY~~~~~N~gavl~i~~~~~~~f~~~~ 321 (321)
T cd07420 262 KHGLSLLIRSHECKPEGYEFCHNNKVITIFSASNYYEEGSNRGAYIKLGPDLTPHFVQYQ 321 (321)
T ss_pred HCCCcEEEEcChhhhcceEEecCCeEEEEecCCccCCCCCccEEEEEECCCCceeEEEeC
Confidence 999999999999999999999999999999999999999999999999999999998874
No 7
>KOG0374 consensus Serine/threonine specific protein phosphatase PP1, catalytic subunit [Signal transduction mechanisms; General function prediction only]
Probab=100.00 E-value=5.5e-73 Score=516.87 Aligned_cols=267 Identities=48% Similarity=0.949 Sum_probs=261.4
Q ss_pred HHHHHHHHHHHHHHhcCCCccccCCcEEEEecCCCCHHHHHHHHHhcC-CCCCCcEEEeCCccCCCCChHHHHHHHHhcc
Q 023226 2 FQVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGG-KCPDTNYLFMGDYVDRGYYSVETVTLLVSLK 80 (285)
Q Consensus 2 ~~~~~l~~~~~~il~~e~~~~~~~~~i~vvGDiHG~~~~l~~il~~~~-~~~~~~~vflGD~vDrG~~s~evl~~l~~lk 80 (285)
+|+.+||.++.++|..+|+++++++||.|+|||||++.||.+++...+ ++++.+|||||||||||++|+|++.+|+++|
T Consensus 35 ~ei~~l~~~~~~if~~~~~l~e~~aPV~i~GDiHGq~~DLlrlf~~~g~~pp~~~ylFLGDYVDRG~~slE~i~LL~a~K 114 (331)
T KOG0374|consen 35 SEIIKLCDKAREIFLSQPTLLELSAPVKIVGDIHGQFGDLLRLFDLLGSFPPDQNYVFLGDYVDRGKQSLETICLLFALK 114 (331)
T ss_pred HHHHHHHHHHHHHhcCCCceeecCCCEEEEccCcCCHHHHHHHHHhcCCCCCcccEEEecccccCCccceEEeehhhhhh
Confidence 489999999999999999999999999999999999999999999999 9999999999999999999999999999999
Q ss_pred ccCCCcEEEeCCCchhhhhhhhhCChHHHHHHhCChhHHHHHHHHHhhCCceeEEeceEEEecCCCCCCCCchhhhhhcc
Q 023226 81 VRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFD 160 (285)
Q Consensus 81 ~~~p~~v~~lrGNHE~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~l~vHgGi~~~~~~~~~i~~i~ 160 (285)
++||+++++||||||.+.++..|||++||..+|+...+|..+++.|+.||++|+|+++++|+|||++|.+.++++++.+.
T Consensus 115 i~yp~~~~lLRGNHE~~~in~~yGFydE~~rr~~~~~~w~~F~~~f~~mp~~a~i~~kI~CmhGGlsp~l~~~~~i~~i~ 194 (331)
T KOG0374|consen 115 IKYPENVFLLRGNHECASINRIYGFYDECKRRYGEIKLWKAFNDAFNCLPLAALIDGKILCMHGGLSPHLKSLDQIRAIP 194 (331)
T ss_pred hhCCceEEEeccccccccccceeeeHHHHHHhcchHHHHHHHHHHHhhCchhheecceEEEecCCCChhhcChHHHhhcc
Confidence 99999999999999999999999999999999976789999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCccccccccCCCC-CCCCccCCCCCccccCHHHHHHHHHHCCCeEEEeeceeeecceEEecCCeeEEEEecC
Q 023226 161 RVQEVPHEGPMCDLLWSDPDD-RCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMEGYNWGHEQKVVTIFSAP 239 (285)
Q Consensus 161 r~~~~~~~~~~~dllWsdp~~-~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iirgH~~~~~G~~~~~~~~~itifSa~ 239 (285)
||.++|+.++++|++||||.. ..+|..+.||.++.||++++++||+++++++|+||||++.+||+++.+++++||||||
T Consensus 195 rp~~~~~~gll~DLlWsdp~~~~~g~~~n~Rg~s~~fg~~~v~~f~~~~~ldlivRaHqvv~dGyeffa~r~lvTIFSAP 274 (331)
T KOG0374|consen 195 RPTDSPDKGLLCDLLWSDPDDDVPGWEENDRGVSFTFGPAVVEDFCKKLDLDLIVRAHQVVEDGYEFFAGRKLVTIFSAP 274 (331)
T ss_pred CCcCCCccceeeeeeecCCCCCCCCcccCCCceeeEecHHHHHHHHHHhCcceEEEcCccccccceEecCceEEEEecCc
Confidence 999999999999999999987 6999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCCcEEEEEEcCCCCeEEEEEecC
Q 023226 240 NYCYRCGNMASILEVDDCKGHTFIQFEPA 268 (285)
Q Consensus 240 ~y~~~~~n~~a~l~i~~~~~~~~~~~~~~ 268 (285)
+||+.+.|.||+|.|++++.++|..+.|.
T Consensus 275 ~Ycg~~~n~gavm~Vd~~l~~sf~~l~p~ 303 (331)
T KOG0374|consen 275 NYCGEFDNAGAVMRVDKNLKCSFVILRPE 303 (331)
T ss_pred hhccccCCceEEEEECCCCeEEEEEeccc
Confidence 99999999999999999999999999995
No 8
>cd07414 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain. PP1 (protein phosphatase type 1) is a serine/threonine phosphatase that regulates many cellular processes including: cell-cycle progression, protein synthesis, muscle contraction, carbohydrate metabolism, transcription and neuronal signaling, through its interaction with at least 180 known targeting proteins. PP1 occurs in all tissues and regulates many pathways, ranging from cell-cycle progression to carbohydrate metabolism. Also included here are the PPKL (PP1 and kelch-like) enzymes including the PPQ, PPZ1, and PPZ2 fungal phosphatases. These PPKLs have a large N-terminal kelch repeat in addition to a C-terminal phosphoesterase domain. The PPP (phosphoprotein phosphatase) family, to which PP1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, Rdg
Probab=100.00 E-value=1.4e-71 Score=503.45 Aligned_cols=266 Identities=47% Similarity=0.973 Sum_probs=257.1
Q ss_pred HHHHHHHHHHHHHHhcCCCccccCCcEEEEecCCCCHHHHHHHHHhcCCCCCCcEEEeCCccCCCCChHHHHHHHHhccc
Q 023226 2 FQVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKV 81 (285)
Q Consensus 2 ~~~~~l~~~~~~il~~e~~~~~~~~~i~vvGDiHG~~~~l~~il~~~~~~~~~~~vflGD~vDrG~~s~evl~~l~~lk~ 81 (285)
+|+.+||++|+++|++||++++++.+++||||||||+.+|.++|+..++++.+++||||||||||++|+|++.+++++|+
T Consensus 26 ~~i~~l~~~~~~il~~ep~~l~i~~~i~viGDIHG~~~~L~~l~~~~~~~~~~~~lfLGDyVDRG~~s~e~i~ll~~lk~ 105 (293)
T cd07414 26 AEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKI 105 (293)
T ss_pred HHHHHHHHHHHHHHHhCCCeEecCCceEEEEecCCCHHHHHHHHHhcCCCCcceEEEEeeEecCCCCcHHHHHHHHHhhh
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCcEEEeCCCchhhhhhhhhCChHHHHHHhCChhHHHHHHHHHhhCCceeEEeceEEEecCCCCCCCCchhhhhhccc
Q 023226 82 RYPQRITILRGNHESRQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDR 161 (285)
Q Consensus 82 ~~p~~v~~lrGNHE~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~l~vHgGi~~~~~~~~~i~~i~r 161 (285)
.+|.++++||||||.+.++..+||..|+..+|+ ..+|..+.++|++||++|+++++++|||||++|...++++++.++|
T Consensus 106 ~~p~~i~llrGNHE~~~~~~~~gf~~e~~~~y~-~~l~~~~~~~f~~lPlaa~i~~~i~cvHgGi~p~~~~l~~i~~i~r 184 (293)
T cd07414 106 KYPENFFLLRGNHECASINRIYGFYDECKRRYN-IKLWKTFTDCFNCLPVAAIIDEKIFCMHGGLSPDLQSMEQIRRIMR 184 (293)
T ss_pred hCCCcEEEEecccchhhHhhhcchhhHHHHhhh-HHHHHHHHHHHHHhHHHHhhCCcEEEEccCCCcccCcHHHHhcccC
Confidence 999999999999999999999999999999995 6799999999999999999999999999999999999999999999
Q ss_pred cccCCCCCccccccccCCCC-CCCCccCCCCCccccCHHHHHHHHHHCCCeEEEeeceeeecceEEecCCeeEEEEecCC
Q 023226 162 VQEVPHEGPMCDLLWSDPDD-RCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMEGYNWGHEQKVVTIFSAPN 240 (285)
Q Consensus 162 ~~~~~~~~~~~dllWsdp~~-~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iirgH~~~~~G~~~~~~~~~itifSa~~ 240 (285)
+.+.|.++.++|++||||.. ..+|.+++||.|+.||++++++||++|++++||||||++.+||++.++++++||||||+
T Consensus 185 ~~~~~~~~~~~dllWsDP~~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~He~~~~G~~~~~~~~~iTvfSa~~ 264 (293)
T cd07414 185 PTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGKDVVAKFLNKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPN 264 (293)
T ss_pred CCCCCchhhHhhhhccCcccccCCCccCCCCcceecCHHHHHHHHHHcCCeEEEECCccccCeEEEeCCCcEEEEecCCc
Confidence 99999899999999999986 67899999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCcEEEEEEcCCCCeEEEEEecC
Q 023226 241 YCYRCGNMASILEVDDCKGHTFIQFEPA 268 (285)
Q Consensus 241 y~~~~~n~~a~l~i~~~~~~~~~~~~~~ 268 (285)
||+..+|+||+|.|+++..++|++|+|.
T Consensus 265 Y~~~~~N~~a~l~i~~~~~~~~~~~~~~ 292 (293)
T cd07414 265 YCGEFDNAGAMMSVDETLMCSFQILKPA 292 (293)
T ss_pred ccCCCCceEEEEEECCCCcEEEEEecCC
Confidence 9999999999999999999999999864
No 9
>PTZ00244 serine/threonine-protein phosphatase PP1; Provisional
Probab=100.00 E-value=2.2e-71 Score=501.61 Aligned_cols=265 Identities=41% Similarity=0.826 Sum_probs=255.8
Q ss_pred HHHHHHHHHHHHHHhcCCCccccCCcEEEEecCCCCHHHHHHHHHhcCCCCCCcEEEeCCccCCCCChHHHHHHHHhccc
Q 023226 2 FQVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKV 81 (285)
Q Consensus 2 ~~~~~l~~~~~~il~~e~~~~~~~~~i~vvGDiHG~~~~l~~il~~~~~~~~~~~vflGD~vDrG~~s~evl~~l~~lk~ 81 (285)
+++.+||++|+++|++||++++++.|++|+||||||+.+|.++|+..++++.++++|||||||||++|+|++.+++++|.
T Consensus 28 ~~i~~l~~~~~~il~~e~~ll~i~~p~~ViGDIHG~~~~L~~l~~~~~~~~~~~~lfLGDyVDRG~~s~evl~ll~~lk~ 107 (294)
T PTZ00244 28 EDIRAVLTEVREIFMSQPMLLEIRPPVRVCGDTHGQYYDLLRIFEKCGFPPYSNYLFLGDYVDRGKHSVETITLQFCYKI 107 (294)
T ss_pred HHHHHHHHHHHHHHHhCCCeEeccCCceeeccCCCCHHHHHHHHHHcCCCCcccEEEeeeEecCCCCHHHHHHHHHHHhh
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCcEEEeCCCchhhhhhhhhCChHHHHHHhCChhHHHHHHHHHhhCCceeEEeceEEEecCCCCCCCCchhhhhhccc
Q 023226 82 RYPQRITILRGNHESRQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDR 161 (285)
Q Consensus 82 ~~p~~v~~lrGNHE~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~l~vHgGi~~~~~~~~~i~~i~r 161 (285)
.+|.++++||||||.+.++..|||..++..+|+ ..+|+.+.++|++||++++++++++|||||++|.+.++++++.++|
T Consensus 108 ~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~y~-~~l~~~~~~~f~~lPlaaii~~~il~vHgGi~p~~~~l~~i~~i~r 186 (294)
T PTZ00244 108 VYPENFFLLRGNHECASINKMYGFFDDVKRRYN-IKLFKAFTDVFNTMPVCCVISEKIICMHGGLSPDLTSLASVNEIER 186 (294)
T ss_pred ccCCeEEEEecccchHhHhhccChHHHHHHHhh-HHHHHHHHHHHHhCchheEecCeeEEEcCCCCchhhHHHHhhhhcc
Confidence 999999999999999999999999999999995 6799999999999999999999999999999999999999999999
Q ss_pred cccCCCCCccccccccCCCC-CCCCccCCCCCccccCHHHHHHHHHHCCCeEEEeeceeeecceEEecCCeeEEEEecCC
Q 023226 162 VQEVPHEGPMCDLLWSDPDD-RCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMEGYNWGHEQKVVTIFSAPN 240 (285)
Q Consensus 162 ~~~~~~~~~~~dllWsdp~~-~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iirgH~~~~~G~~~~~~~~~itifSa~~ 240 (285)
+.+.|.++.++|++||||.. ..+|.+++||.|++||++++++||++|++++||||||++++||++.++++++||||||+
T Consensus 187 p~~~~~~~~~~dllWsDP~~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~Hq~~~~G~~~~~~~~~iTvfSa~~ 266 (294)
T PTZ00244 187 PCDVPDRGILCDLLWADPEDEVRGFLESDRGVSYLFGEDIVNDFLDMVDMDLIVRAHQVMERGYGFFASRQLVTVFSAPN 266 (294)
T ss_pred ccCCCccchhheeeecCcccccCCCCcCCCCCccccCHHHHHHHHHHcCCcEEEEcCccccCceEEcCCCeEEEEeCCcc
Confidence 99999899999999999986 67999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCcEEEEEEcCCCCeEEEEEec
Q 023226 241 YCYRCGNMASILEVDDCKGHTFIQFEP 267 (285)
Q Consensus 241 y~~~~~n~~a~l~i~~~~~~~~~~~~~ 267 (285)
||+..+|+||+|.|+++..++|++|.+
T Consensus 267 Y~~~~~N~~a~l~i~~~~~~~f~~~~~ 293 (294)
T PTZ00244 267 YCGEFDNDAAVMNIDDKLQCSFLIIPA 293 (294)
T ss_pred ccCCCCceEEEEEECCCCcEeEEEeec
Confidence 999999999999999999999998764
No 10
>cd07416 MPP_PP2B PP2B, metallophosphatase domain. PP2B (calcineurin) is a unique serine/threonine protein phosphatase in its regulation by a second messenger (calcium and calmodulin). PP2B is involved in many biological processes including immune responses, the second messenger cAMP pathway, sodium/potassium ion transport in the nephron, cell cycle progression in lower eukaryotes, cardiac hypertrophy, and memory formation. PP2B is highly conserved from yeast to humans, but is absent from plants. PP2B is a heterodimer consisting of a catalytic subunit (CnA) and a regulatory subunit (CnB); CnB contains four Ca2+ binding motifs referred to as EF hands. The PPP (phosphoprotein phosphatase) family, to which PP2B belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -G
Probab=100.00 E-value=6.2e-71 Score=502.09 Aligned_cols=270 Identities=43% Similarity=0.767 Sum_probs=255.3
Q ss_pred HHHHHHHHHHHHHHhcCCCccccCCcEEEEecCCCCHHHHHHHHHhcCCCCCCcEEEeCCccCCCCChHHHHHHHHhccc
Q 023226 2 FQVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKV 81 (285)
Q Consensus 2 ~~~~~l~~~~~~il~~e~~~~~~~~~i~vvGDiHG~~~~l~~il~~~~~~~~~~~vflGD~vDrG~~s~evl~~l~~lk~ 81 (285)
+++.+||++|+++|++||++++++.|++||||||||+.+|.++|+..+.++.+++||||||||||++|+|++.+|+++|+
T Consensus 19 ~~i~~l~~~~~~il~~e~~l~~i~~~i~ViGDIHG~~~dL~~l~~~~g~~~~~~ylFLGDyVDRG~~s~Evi~lL~~lki 98 (305)
T cd07416 19 EDALRIITEGAEILRQEPNLLRIEAPVTVCGDIHGQFYDLLKLFEVGGSPANTRYLFLGDYVDRGYFSIECVLYLWALKI 98 (305)
T ss_pred HHHHHHHHHHHHHHHhCCCeEccCCCEEEEEeCCCCHHHHHHHHHhcCCCCCceEEEECCccCCCCChHHHHHHHHHHHh
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCcEEEeCCCchhhhhhhhhCChHHHHHHhCChhHHHHHHHHHhhCCceeEEeceEEEecCCCCCCCCchhhhhhccc
Q 023226 82 RYPQRITILRGNHESRQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDR 161 (285)
Q Consensus 82 ~~p~~v~~lrGNHE~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~l~vHgGi~~~~~~~~~i~~i~r 161 (285)
.+|.++++||||||.+.++..++|..|+..+|+ ..+|+.+.++|++||++++++++++|||||++|.+.+++++++++|
T Consensus 99 ~~p~~v~lLRGNHE~~~l~~~~gf~~e~~~~y~-~~l~~~~~~~f~~LPlaaii~~~i~~vHGGi~p~~~~l~~i~~i~r 177 (305)
T cd07416 99 LYPKTLFLLRGNHECRHLTEYFTFKQECKIKYS-ERVYDACMEAFDCLPLAALMNQQFLCVHGGLSPELKTLDDIRKLDR 177 (305)
T ss_pred hcCCCEEEEeCCCcHHHHHHhhCchhHHHHhcc-HHHHHHHHHHHhhccceeEEcCCEEEEcCCCCcccccHHHhcccCC
Confidence 999999999999999999999999999999994 6789999999999999999999999999999999999999999999
Q ss_pred cccCCCCCccccccccCCCCCC-------CCccC-CCCCccccCHHHHHHHHHHCCCeEEEeeceeeecceEEecCC---
Q 023226 162 VQEVPHEGPMCDLLWSDPDDRC-------GWGIS-PRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMEGYNWGHEQ--- 230 (285)
Q Consensus 162 ~~~~~~~~~~~dllWsdp~~~~-------~~~~~-~rg~~~~fg~~~~~~fl~~~~~~~iirgH~~~~~G~~~~~~~--- 230 (285)
+.+.|.++.++|++||||.... +|.++ +||.|+.||++++++||++|++++||||||++.+||++.+++
T Consensus 178 ~~~~~~~~~~~dllWsDP~~~~~~~~~~~~~~~~~~Rg~g~~fG~~~~~~Fl~~n~l~~iiR~He~~~~G~~~~~~~~~~ 257 (305)
T cd07416 178 FREPPAFGPMCDLLWSDPLEDFGNEKTQEHFVHNTVRGCSYFYSYRAVCEFLQKNNLLSIIRAHEAQDAGYRMYRKSQTT 257 (305)
T ss_pred CCCCCCCCcceeeeecCcccccccccccccccccCCCCCceecCHHHHHHHHHHcCCeEEEEeccccccceEEecCCCcC
Confidence 9999889999999999997532 36654 899999999999999999999999999999999999998876
Q ss_pred ---eeEEEEecCCccccCCCcEEEEEEcCCCCeEEEEEecCCCCCC
Q 023226 231 ---KVVTIFSAPNYCYRCGNMASILEVDDCKGHTFIQFEPAPRRGE 273 (285)
Q Consensus 231 ---~~itifSa~~y~~~~~n~~a~l~i~~~~~~~~~~~~~~~~~~~ 273 (285)
+++||||||+||+..+|+||+|.|+++. ++|.+|+++|+|.-
T Consensus 258 ~~~~~iTvFSa~~Y~~~~~N~~a~l~i~~~~-~~~~~~~~~~~~~~ 302 (305)
T cd07416 258 GFPSLITIFSAPNYLDVYNNKAAVLKYENNV-MNIRQFNCSPHPYW 302 (305)
T ss_pred CCCcEEEEeCCccccCCCCceEEEEEEcCCc-ceEEEecCCCCCCC
Confidence 8999999999999999999999999874 79999999998854
No 11
>cd07417 MPP_PP5_C PP5, C-terminal metallophosphatase domain. Serine/threonine protein phosphatase-5 (PP5) is a member of the PPP gene family of protein phosphatases that is highly conserved among eukaryotes and widely expressed in mammalian tissues. PP5 has a C-terminal phosphatase domain and an extended N-terminal TPR (tetratricopeptide repeat) domain containing three TPR motifs. The PPP (phosphoprotein phosphatase) family, to which PP5 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cel
Probab=100.00 E-value=5.8e-71 Score=503.43 Aligned_cols=275 Identities=38% Similarity=0.753 Sum_probs=258.8
Q ss_pred HHHHHHHHHHHHHHhcCCCccccCCc----EEEEecCCCCHHHHHHHHHhcCCCCC-CcEEEeCCccCCCCChHHHHHHH
Q 023226 2 FQVRVLCEKAKEILMDESNVQPVKSP----VTICGDIHGQFHDLAELFRIGGKCPD-TNYLFMGDYVDRGYYSVETVTLL 76 (285)
Q Consensus 2 ~~~~~l~~~~~~il~~e~~~~~~~~~----i~vvGDiHG~~~~l~~il~~~~~~~~-~~~vflGD~vDrG~~s~evl~~l 76 (285)
+++.+||++|+++|++||++++++.+ ++||||||||+.+|.++|+..++++. +++||||||||||++|+||+.+|
T Consensus 32 ~~~~~l~~~~~~il~~ep~l~~i~~p~~~~~~VvGDIHG~~~dL~~ll~~~g~~~~~~~ylFLGDyVDRG~~S~Evl~ll 111 (316)
T cd07417 32 KYAYQILLQVKELLKKLPSLVEITIPEGEKITVCGDTHGQFYDLLNIFELNGLPSETNPYLFNGDFVDRGSFSVEVILTL 111 (316)
T ss_pred HHHHHHHHHHHHHHHhCCcceeccCCCCceeEEeecccCCHHHHHHHHHhcCCCCccCeEEEEeeEecCCCChHHHHHHH
Confidence 57899999999999999999988755 99999999999999999999998754 56999999999999999999999
Q ss_pred HhccccCCCcEEEeCCCchhhhhhhhhCChHHHHHHhCChhHHHHHHHHHhhCCceeEEeceEEEecCCC-CCCCCchhh
Q 023226 77 VSLKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALVESEIFCLHGGL-SPSIETLDN 155 (285)
Q Consensus 77 ~~lk~~~p~~v~~lrGNHE~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~l~vHgGi-~~~~~~~~~ 155 (285)
+++|+.+|+++++||||||.+.++..|||..|+..+|+ ..+|+.+.++|++||++++++++++|||||+ ++...++++
T Consensus 112 ~~lki~~p~~v~lLRGNHE~~~~~~~~gf~~e~~~k~~-~~l~~~~~~~f~~LPlaaii~~~~~~vHgGi~~~~~~~l~~ 190 (316)
T cd07417 112 FAFKLLYPNHFHLNRGNHETDNMNKMYGFEGEVKAKYN-EQMFDLFSEVFNWLPLAHLINGKVLVVHGGLFSDDGVTLDD 190 (316)
T ss_pred HHhhhccCCceEEEeeccchHHHHHHhhhcchhhhccc-HHHHHHHHHHHHhchHhheeCCeEEEEccccccCCCccHHH
Confidence 99999999999999999999999999999999999995 6799999999999999999999999999999 567889999
Q ss_pred hhhccccccCCCCCccccccccCCCCCCCCccCCCCCccccCHHHHHHHHHHCCCeEEEeeceeeecceEEecCCeeEEE
Q 023226 156 IRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMEGYNWGHEQKVVTI 235 (285)
Q Consensus 156 i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iirgH~~~~~G~~~~~~~~~iti 235 (285)
+++++|+.+.|.++.++|+|||||.+..+|.+++||.|+.||++++++||++|++++||||||++.+||++.++++++||
T Consensus 191 i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~s~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~He~~~~G~~~~~~~~~~Tv 270 (316)
T cd07417 191 IRKIDRFRQPPDSGLMCELLWSDPQPQPGRSPSKRGVGCQFGPDVTKRFLEENNLEYIIRSHEVKDEGYEVEHDGKCITV 270 (316)
T ss_pred hhcccCCCCCCccccceeeeecCCCCCCCCCccCCCCceEeCHHHHHHHHHHcCCcEEEECCcccceeEEEecCCeEEEE
Confidence 99999999888899999999999998889999999999999999999999999999999999999999999999999999
Q ss_pred EecCCccccCCCcEEEEEEcC-CCCeEEEEEecCCCCCCCCCC
Q 023226 236 FSAPNYCYRCGNMASILEVDD-CKGHTFIQFEPAPRRGEPDVT 277 (285)
Q Consensus 236 fSa~~y~~~~~n~~a~l~i~~-~~~~~~~~~~~~~~~~~~~~~ 277 (285)
||||+||+..+|+||+|.|++ +++++|++|++.|++.-.+..
T Consensus 271 fSa~~Y~~~~~N~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 313 (316)
T cd07417 271 FSAPNYCDQMGNKGAFIRITGSDLKPKFTQFEAVPHPNVKPMA 313 (316)
T ss_pred eCCccccCCCCcceEEEEEeCCCceeeeEeccCCCCCCCCccC
Confidence 999999999999999999998 899999999999988766543
No 12
>smart00156 PP2Ac Protein phosphatase 2A homologues, catalytic domain. Large family of serine/threonine phosphatases, that includes PP1, PP2A and PP2B (calcineurin) family members.
Probab=100.00 E-value=1e-70 Score=493.91 Aligned_cols=266 Identities=54% Similarity=0.986 Sum_probs=256.9
Q ss_pred HHHHHHHHHHHHHHhcCCCccccCCcEEEEecCCCCHHHHHHHHHhcCCCCCCcEEEeCCccCCCCChHHHHHHHHhccc
Q 023226 2 FQVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKV 81 (285)
Q Consensus 2 ~~~~~l~~~~~~il~~e~~~~~~~~~i~vvGDiHG~~~~l~~il~~~~~~~~~~~vflGD~vDrG~~s~evl~~l~~lk~ 81 (285)
+++.+||++|+++|++||+++++++|++||||||||+.+|.++|+..+.++.+++||||||||||++|+|++.+++++|+
T Consensus 4 ~~i~~l~~~~~~il~~e~~~~~i~~~i~vvGDiHG~~~~l~~ll~~~~~~~~~~~vfLGD~VDrG~~s~e~l~~l~~lk~ 83 (271)
T smart00156 4 EEILELLREVKEIFRQEPNLVEVSAPVTVCGDIHGQFDDLLRLFDLNGPPPDTNYVFLGDYVDRGPFSIEVILLLFALKI 83 (271)
T ss_pred HHHHHHHHHHHHHHHhCCCeEEeCCCEEEEEeCcCCHHHHHHHHHHcCCCCCceEEEeCCccCCCCChHHHHHHHHHHHh
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCcEEEeCCCchhhhhhhhhCChHHHHHHhCChhHHHHHHHHHhhCCceeEEeceEEEecCCCCCCCCchhhhhhccc
Q 023226 82 RYPQRITILRGNHESRQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDR 161 (285)
Q Consensus 82 ~~p~~v~~lrGNHE~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~l~vHgGi~~~~~~~~~i~~i~r 161 (285)
.+|.++++||||||.+.++..+||..|+..+|+ ..+|+.+.++|++||++++++++++|||||++|...++++++.++|
T Consensus 84 ~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~~-~~l~~~~~~~f~~LPl~aii~~~~~~vHgGi~~~~~~l~~i~~i~r 162 (271)
T smart00156 84 LYPNRVVLLRGNHESRSMNEIYGFYDECKRKYG-EEIYEKFQEAFSWLPLAALIDNKILCMHGGLSPDLTTLDDIRKLKR 162 (271)
T ss_pred cCCCCEEEEeccccHHHHHHhccchhhhhhhcC-HHHHHHHHHHHhhChhheEEcCeEEEEecCCCCccCCHHHHhcccC
Confidence 999999999999999999999999999999996 6899999999999999999988999999999999999999999999
Q ss_pred cccCCCCCccccccccCCCC-CCCCccCCCCCccccCHHHHHHHHHHCCCeEEEeeceeeecceEEecCCeeEEEEecCC
Q 023226 162 VQEVPHEGPMCDLLWSDPDD-RCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMEGYNWGHEQKVVTIFSAPN 240 (285)
Q Consensus 162 ~~~~~~~~~~~dllWsdp~~-~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iirgH~~~~~G~~~~~~~~~itifSa~~ 240 (285)
+.+.+.++.+.|++||||.. ..+|.+++||.++.||++++++||++|++++||||||++++||++.++++++||||||+
T Consensus 163 ~~~~~~~~~~~dllWsDP~~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~He~~~~G~~~~~~~~~~TvfSa~~ 242 (271)
T smart00156 163 PQEPPDEGLLIDLLWSDPDQPVDGFQPSIRGASYYFGPDAVDEFLKKNNLKLIIRAHQVVDDGYEFFHDRKLVTIFSAPN 242 (271)
T ss_pred CCCCCchhhhhheeecCCCcccCCCccCCCCCccccCHHHHHHHHHHCCCeEEEecCcccCCcEEEecCCcEEEEECCcc
Confidence 99888899999999999964 78899999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCcEEEEEEcCCCCeEEEEEecC
Q 023226 241 YCYRCGNMASILEVDDCKGHTFIQFEPA 268 (285)
Q Consensus 241 y~~~~~n~~a~l~i~~~~~~~~~~~~~~ 268 (285)
||+.++|+||+|.|+++++++|.+|+|.
T Consensus 243 y~~~~~n~~a~~~i~~~~~~~~~~~~~~ 270 (271)
T smart00156 243 YCGRFGNKAAVLKVDKDLKLSFEQFKPG 270 (271)
T ss_pred cccCCCceEEEEEECCCCcEEEEEecCC
Confidence 9998999999999999999999999864
No 13
>KOG0371 consensus Serine/threonine protein phosphatase 2A, catalytic subunit [Signal transduction mechanisms]
Probab=100.00 E-value=1e-70 Score=471.70 Aligned_cols=283 Identities=82% Similarity=1.412 Sum_probs=277.4
Q ss_pred HHHHHHHHHHHHHhcCCCccccCCcEEEEecCCCCHHHHHHHHHhcCCCCCCcEEEeCCccCCCCChHHHHHHHHhcccc
Q 023226 3 QVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVR 82 (285)
Q Consensus 3 ~~~~l~~~~~~il~~e~~~~~~~~~i~vvGDiHG~~~~l~~il~~~~~~~~~~~vflGD~vDrG~~s~evl~~l~~lk~~ 82 (285)
++..+|+.|+++|++|.++.+++.+++|+||+||||++|.++++..|..++..++|+|||||||++|+|++.+|.++|++
T Consensus 37 ~v~~lc~~a~~~L~~e~nV~~v~~pvtvcGDvHGqf~dl~ELfkiGG~~pdtnylfmGDyvdrGy~SvetVS~lva~Kvr 116 (319)
T KOG0371|consen 37 DVSSLCLLAKEILDKEENVQPVNCPVTVCGDVHGQFHDLIELFKIGGLAPDTNYLFMGDYVDRGYYSVETVSLLVALKVR 116 (319)
T ss_pred cchhHHHHHHHHHhccccccccccceEEecCcchhHHHHHHHHHccCCCCCcceeeeeeecccccchHHHHHHHHHhhcc
Confidence 56789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcEEEeCCCchhhhhhhhhCChHHHHHHhCChhHHHHHHHHHhhCCceeEEeceEEEecCCCCCCCCchhhhhhcccc
Q 023226 83 YPQRITILRGNHESRQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRV 162 (285)
Q Consensus 83 ~p~~v~~lrGNHE~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~l~vHgGi~~~~~~~~~i~~i~r~ 162 (285)
||++|.+||||||.+.+...|||++||.+|||...+|..|.+.|..+|+++.|+++++|+|||++|++.+++.++.+.|.
T Consensus 117 y~~rvtilrGNHEsrqitqvygfydeclRkyg~anvw~~Ftdlfdy~P~tali~~~ifc~HGgLspsi~tld~~r~~dr~ 196 (319)
T KOG0371|consen 117 YPDRVTILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALIESKIFCLHGGLSPSIDTLDLIRLLDRI 196 (319)
T ss_pred ccceeEEecCchHHHHHHHHHhhHHHHHhhcccccchHHhhhhhhccchHhhhccceeeccCCcCcccchHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCccccccccCCCCCCCCccCCCCCccccCHHHHHHHHHHCCCeEEEeeceeeecceEEecCCeeEEEEecCCcc
Q 023226 163 QEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMEGYNWGHEQKVVTIFSAPNYC 242 (285)
Q Consensus 163 ~~~~~~~~~~dllWsdp~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iirgH~~~~~G~~~~~~~~~itifSa~~y~ 242 (285)
.++|.++.+||+|||||.++.+|..++||.++.||.+..++|-.+||+++|-|+||.+.+||.|.+...++|||||||||
T Consensus 197 ~evphegpmcDlLwsdpddr~gwg~sprgag~tfg~di~~~fn~~n~lslisRahqlvm~g~nW~~~~~~vtiFSapnyc 276 (319)
T KOG0371|consen 197 QEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHKNGLSLISRAHQLVMEGYNWYHLWNVVTIFSAPNYC 276 (319)
T ss_pred hcccCCCChhheeccCcccCCCCCCCCCCCCcccchhhHHHhhccCCchHhHHHHHHHhcccceeeecceeEEccCCchh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCcEEEEEEcCCCCeEEEEEecCCCCCCCCCCCCCCCCCC
Q 023226 243 YRCGNMASILEVDDCKGHTFIQFEPAPRRGEPDVTRRTPDYFL 285 (285)
Q Consensus 243 ~~~~n~~a~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (285)
++++|.+|++.++++....|.||+|+|...+...+++.|||||
T Consensus 277 Yrcgn~a~i~e~d~~~~~~f~q~~psp~k~e~~vtr~tpDYfL 319 (319)
T KOG0371|consen 277 YRCGNQAAIMERDDTKNYDFLQFDPSPRKVEPDVTRKTPDYFL 319 (319)
T ss_pred hccccHHHHhhhhhccCcceEEecCCccccccccccCCCCCcC
Confidence 9999999999999999999999999999999999999999997
No 14
>cd07419 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain. Bsu1 encodes a nuclear serine-threonine protein phosphatase found in plants and protozoans. Bsu1 has a C-terminal phosphatase domain and an N-terminal Kelch-repeat domain. Bsu1 is preferentially expressed in elongating plant cells. It modulates the phosphorylation state of Bes1, a transcriptional regulator phosphorylated by the glycogen synthase kinase Bin2, as part of a steroid hormone signal transduction pathway. The PPP (phosphoprotein phosphatase) family, to which Bsu1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most
Probab=100.00 E-value=9.5e-68 Score=482.98 Aligned_cols=266 Identities=41% Similarity=0.763 Sum_probs=248.5
Q ss_pred HHHHHHHHHHHHHHhcCCCccccCCcEEEEecCCCCHHHHHHHHHhcCCCCC--------CcEEEeCCccCCCCChHHHH
Q 023226 2 FQVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPD--------TNYLFMGDYVDRGYYSVETV 73 (285)
Q Consensus 2 ~~~~~l~~~~~~il~~e~~~~~~~~~i~vvGDiHG~~~~l~~il~~~~~~~~--------~~~vflGD~vDrG~~s~evl 73 (285)
+|+.+||++|+++|++||++++++.+++||||||||+.+|.++|+..+.++. .++||||||||||++|+||+
T Consensus 24 ~~i~~l~~~~~~il~~e~~~~~i~~~~~viGDIHG~~~~L~~ll~~~g~~~~~~~~~~~~~~~vfLGDyVDRGp~s~evl 103 (311)
T cd07419 24 NEILELCDAAEDIFKQEPMVLRLRAPIKIFGDIHGQFGDLMRLFDEYGSPVTEAAGDIEYIDYLFLGDYVDRGSNSLETI 103 (311)
T ss_pred HHHHHHHHHHHHHHHhCCCeEeeCCCEEEEEeccCCHHHHHHHHHHcCCCcccccCCCcCceEEEECCccCCCCChHHHH
Confidence 6899999999999999999999999999999999999999999999887654 57999999999999999999
Q ss_pred HHHHhccccCCCcEEEeCCCchhhhhhhhhCChHHHHHHhCC-----hhHHHHHHHHHhhCCceeEEeceEEEecCCCCC
Q 023226 74 TLLVSLKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGN-----ANVWKIFTDLFDYFPLTALVESEIFCLHGGLSP 148 (285)
Q Consensus 74 ~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~f~~e~~~~~~~-----~~~~~~~~~~~~~lP~~~~i~~~~l~vHgGi~~ 148 (285)
.+|++++..+|.++++||||||.+.++..+||..++..+|+. ..+|..+.++|++||++++++++++|||||++|
T Consensus 104 ~ll~~lk~~~p~~v~lLRGNHE~~~l~~~~gf~~e~~~~~~~~~~~~~~l~~~~~~~f~~LPl~avi~~~~l~vHgGi~p 183 (311)
T cd07419 104 CLLLALKVKYPNQIHLIRGNHEDRDINALFGFREECKERLGEDPNDGDSVWRRINRLFEWLPLAAIIEDKILCMHGGIGR 183 (311)
T ss_pred HHHHHhhhcCCCcEEEeccccchHHHHHHhcccHHHHHhcCccchhhHHHHHHHHHHHHhCchhheecccEEEEccCCCC
Confidence 999999999999999999999999999999999999999875 368999999999999999999999999999999
Q ss_pred CCCchhhhhhccccc-cCCCCCccccccccCCCCC---CCCccCC---CCCc--cccCHHHHHHHHHHCCCeEEEeecee
Q 023226 149 SIETLDNIRNFDRVQ-EVPHEGPMCDLLWSDPDDR---CGWGISP---RGAG--YTFGQDISEQFNHTNNLKLIARAHQL 219 (285)
Q Consensus 149 ~~~~~~~i~~i~r~~-~~~~~~~~~dllWsdp~~~---~~~~~~~---rg~~--~~fg~~~~~~fl~~~~~~~iirgH~~ 219 (285)
...++++++.+.|+. ..+.+..+.|++||||... .+|.+++ ||.| +.||++++++||++||+++||||||+
T Consensus 184 ~~~~l~~i~~i~r~~~~~~~~~~~~dllWsDP~~~~~~~~~~~~~~~~rg~g~~~~fg~~~~~~Fl~~n~l~~iiRgHe~ 263 (311)
T cd07419 184 SINHVSEIEDLKRPLTMEFGEQVVMDLLWSDPTENDSVLGLRPNAIDPRGPGLIVKFGPDRVHRFLEENDLQMIIRAHEC 263 (311)
T ss_pred CCCcHHHHhhcCCCCCCCCCCcceeeeeccCccccccccccccCCCCCCCCCcceeECHHHHHHHHHHCCCeEEEEechh
Confidence 999999999999986 4455678999999999863 4666665 9988 69999999999999999999999999
Q ss_pred eecceEEecCCeeEEEEecCCccccCCCcEEEEEEcCCCCeEEEEEec
Q 023226 220 VMEGYNWGHEQKVVTIFSAPNYCYRCGNMASILEVDDCKGHTFIQFEP 267 (285)
Q Consensus 220 ~~~G~~~~~~~~~itifSa~~y~~~~~n~~a~l~i~~~~~~~~~~~~~ 267 (285)
+++||++.++++++||||||+||+.++|.||+|.|+++.++++++++|
T Consensus 264 ~~~G~~~~~~~~~iTvfSa~~y~~~~~n~~ai~~i~~~~~~~~~~~~~ 311 (311)
T cd07419 264 VMDGFERFAQGKLITLFSATNYCGTAGNAGAILVLGRDLTIIPKLIHP 311 (311)
T ss_pred hhCCeEEeCCCeEEEEecCCcccCCCCceEEEEEECCCCcEeEEEeCC
Confidence 999999999999999999999999999999999999999999999986
No 15
>cd07418 MPP_PP7 PP7, metallophosphatase domain. PP7 is a plant phosphoprotein phosphatase that is highly expressed in a subset of stomata and thought to play an important role in sensory signaling. PP7 acts as a positive regulator of signaling downstream of cryptochrome blue light photoreceptors. PP7 also controls amplification of phytochrome signaling, and interacts with nucleotidediphosphate kinase 2 (NDPK2), a positive regulator of phytochrome signalling. In addition, PP7 interacts with heat shock transcription factor HSF and up-regulates protective heat shock proteins. PP7 may also play a role in salicylic acid-dependent defense signaling. The PPP (phosphoprotein phosphatase) family, to which PP7 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-,
Probab=100.00 E-value=1.6e-67 Score=486.88 Aligned_cols=270 Identities=39% Similarity=0.643 Sum_probs=245.4
Q ss_pred HHHHHHHHHHHHHHhcCCCccccC----CcEEEEecCCCCHHHHHHHHHhcCCCCC-CcEEEeCCccCCCCChHHHHHHH
Q 023226 2 FQVRVLCEKAKEILMDESNVQPVK----SPVTICGDIHGQFHDLAELFRIGGKCPD-TNYLFMGDYVDRGYYSVETVTLL 76 (285)
Q Consensus 2 ~~~~~l~~~~~~il~~e~~~~~~~----~~i~vvGDiHG~~~~l~~il~~~~~~~~-~~~vflGD~vDrG~~s~evl~~l 76 (285)
+++.+||++|+++|++||++++++ .+++|||||||++.+|.++|+..++++. .++||||||||||++|+||+.+|
T Consensus 38 ~~i~~L~~~a~~il~~ep~ll~i~~~~~~~i~VvGDIHG~~~dL~~ll~~~g~~~~~~~ylFLGDyVDRGp~SlEvl~lL 117 (377)
T cd07418 38 NVFDSLVLTAHKILHREPNCVRIDVEDVCEVVVVGDVHGQLHDVLFLLEDAGFPDQNRFYVFNGDYVDRGAWGLETFLLL 117 (377)
T ss_pred HHHHHHHHHHHHHHHhCCCeEEecCCCCCCEEEEEecCCCHHHHHHHHHHhCCCCCCceEEEeccccCCCCChHHHHHHH
Confidence 588999999999999999999987 7999999999999999999999998765 45999999999999999999999
Q ss_pred HhccccCCCcEEEeCCCchhhhhhhhhCChHHHHHHhCC--hhHHHHHHHHHhhCCceeEEeceEEEecCCCC-------
Q 023226 77 VSLKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGN--ANVWKIFTDLFDYFPLTALVESEIFCLHGGLS------- 147 (285)
Q Consensus 77 ~~lk~~~p~~v~~lrGNHE~~~~~~~~~f~~e~~~~~~~--~~~~~~~~~~~~~lP~~~~i~~~~l~vHgGi~------- 147 (285)
+++|+.+|.++++||||||.+.++..+||..|+..+|+. ..+|+.+.++|++||++++++++++||||||+
T Consensus 118 ~~lki~~p~~v~lLRGNHE~~~i~~~~Gf~~E~~~~y~~~~~~l~~~~~~~f~~LPlaavI~~~i~cvHGGI~~~~~l~~ 197 (377)
T cd07418 118 LSWKVLLPDRVYLLRGNHESKFCTSMYGFEQEVLTKYGDKGKHVYRKCLGCFEGLPLASIIAGRVYTAHGGLFRSPSLPK 197 (377)
T ss_pred HHHhhccCCeEEEEeeecccccchhhcccchhhhhhcCchHHHHHHHHHHHHHhCCcEEEECCCEEEECCCcCCcccccc
Confidence 999999999999999999999999999999999999975 47999999999999999999989999999994
Q ss_pred --------------------CCCCchhhhhhcccc-ccCCCCC---ccccccccCCCCCCCCccC-CCCCccccCHHHHH
Q 023226 148 --------------------PSIETLDNIRNFDRV-QEVPHEG---PMCDLLWSDPDDRCGWGIS-PRGAGYTFGQDISE 202 (285)
Q Consensus 148 --------------------~~~~~~~~i~~i~r~-~~~~~~~---~~~dllWsdp~~~~~~~~~-~rg~~~~fg~~~~~ 202 (285)
|.+.++++++.++|+ .++|.++ +++|+|||||....+|.++ +||.|+.||+++++
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~l~sl~~i~~i~r~~~~~~~~~~~~i~~dlLWSDP~~~~g~~~~~~RG~g~~FG~~~~~ 277 (377)
T cd07418 198 RKKQKGKNRRVLLLEPESESLKLGTLDDLMKARRSVLDPPGEGSNLIPGDVLWSDPSLTPGLSPNKQRGIGLLWGPDCTE 277 (377)
T ss_pred cccccccccccccccccccCCCCCCHHHHhhCCCCCCCCCCCCccccceeeEeeCCccCCCCCccCCCCCccccCHHHHH
Confidence 445689999999996 4565554 4789999999987787766 79999999999999
Q ss_pred HHHHHCCCeEEEeecee------------eecceEEecC---CeeEEEEecCCcc------ccCCCcEEEEEEcCC--CC
Q 023226 203 QFNHTNNLKLIARAHQL------------VMEGYNWGHE---QKVVTIFSAPNYC------YRCGNMASILEVDDC--KG 259 (285)
Q Consensus 203 ~fl~~~~~~~iirgH~~------------~~~G~~~~~~---~~~itifSa~~y~------~~~~n~~a~l~i~~~--~~ 259 (285)
+||++|++++||||||+ +.+||++.++ ++++||||||||| +.++|+||++.++.+ .+
T Consensus 278 ~FL~~n~l~~IIRsHe~~~~~~~~~~~~~v~~Gy~~~~~~~~~~liTvFSa~nY~~~~~~~~~~~N~ga~~~~~~~~~~~ 357 (377)
T cd07418 278 EFLEKNNLKLIIRSHEGPDAREKRPGLAGMNKGYTVDHDVESGKLITLFSAPDYPQFQATEERYNNKGAYIILQPPDFSD 357 (377)
T ss_pred HHHHHcCCcEEEECCCCcccccccccchhhhCceEEeccCCCCcEEEEecCCccccccccccccCcceEEEEEecCCCCC
Confidence 99999999999999996 6799999887 9999999999999 578999999999754 47
Q ss_pred eEEEEEecC-CCC
Q 023226 260 HTFIQFEPA-PRR 271 (285)
Q Consensus 260 ~~~~~~~~~-~~~ 271 (285)
.+|++|+++ |+|
T Consensus 358 ~~~~~~~~~~~~~ 370 (377)
T cd07418 358 PQFHTFEAVKPRP 370 (377)
T ss_pred ccceEeeccCCCC
Confidence 999999998 444
No 16
>KOG0375 consensus Serine-threonine phosphatase 2B, catalytic subunit [General function prediction only]
Probab=100.00 E-value=5.9e-66 Score=459.50 Aligned_cols=271 Identities=44% Similarity=0.764 Sum_probs=253.9
Q ss_pred HHHHHHHHHHHHHHhcCCCccccCCcEEEEecCCCCHHHHHHHHHhcCCCCCCcEEEeCCccCCCCChHHHHHHHHhccc
Q 023226 2 FQVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKV 81 (285)
Q Consensus 2 ~~~~~l~~~~~~il~~e~~~~~~~~~i~vvGDiHG~~~~l~~il~~~~~~~~~~~vflGD~vDrG~~s~evl~~l~~lk~ 81 (285)
+..+.|+.++..+|++|++++++.+||.|+|||||||.||.++|+..|.|...+|+|||||||||..|+||+.+|.+||+
T Consensus 64 e~alrIi~~~a~llr~Eknmi~v~APiTVCGDIHGQf~DLmKLFEVGG~PA~t~YLFLGDYVDRGyFSiECvlYLwsLKi 143 (517)
T KOG0375|consen 64 EQALRIINEGAALLRQEKNMIEVEAPITVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRGYFSIECVLYLWSLKI 143 (517)
T ss_pred HHHHHHHHHHHHHHhcCCceEeccCCeeEecccchHHHHHHHHHHccCCcccceeEeeccccccceeeeehHHHHHHHhc
Confidence 34678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCcEEEeCCCchhhhhhhhhCChHHHHHHhCChhHHHHHHHHHhhCCceeEEeceEEEecCCCCCCCCchhhhhhccc
Q 023226 82 RYPQRITILRGNHESRQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDR 161 (285)
Q Consensus 82 ~~p~~v~~lrGNHE~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~l~vHgGi~~~~~~~~~i~~i~r 161 (285)
.||..+++||||||++.+...+.|..||..|| ..++|+...+.|+.||+||+.++.+||||||+||.+.++++|++++|
T Consensus 144 ~yp~tl~lLRGNHECrHLT~YFTFKqEc~iKY-se~vYdaCmesFd~LPLAAlmNqQflCVHGGlSPEi~tl~DIr~l~R 222 (517)
T KOG0375|consen 144 NYPKTLFLLRGNHECRHLTEYFTFKQECKIKY-SERVYDACMESFDCLPLAALMNQQFLCVHGGLSPEIHTLDDIRKLDR 222 (517)
T ss_pred CCCCeEEEecCCcchhhhHhHhhHHHHHhHhc-cHHHHHHHHHHhccchHHHHhcCceEEecCCCCcccccHHHHHhhhh
Confidence 99999999999999999999999999999999 57899999999999999999999999999999999999999999999
Q ss_pred cccCCCCCccccccccCCCCC-------CCCc-cCCCCCccccCHHHHHHHHHHCCCeEEEeeceeeecceEEecC----
Q 023226 162 VQEVPHEGPMCDLLWSDPDDR-------CGWG-ISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMEGYNWGHE---- 229 (285)
Q Consensus 162 ~~~~~~~~~~~dllWsdp~~~-------~~~~-~~~rg~~~~fg~~~~~~fl~~~~~~~iirgH~~~~~G~~~~~~---- 229 (285)
+.++|.-+++||+|||||.+. +.|. .+.||+++.|...++.+||++||+--|||+|+.++.||+....
T Consensus 223 F~EpPa~GpmCDLLWsDPlEdfgnek~~e~f~hNsvRGCSyfysy~A~C~FLq~nnLLSIiRAHEAQDaGYRMYrksqtt 302 (517)
T KOG0375|consen 223 FKEPPAFGPMCDLLWSDPLEDFGNEKTSEHFTHNSVRGCSYFYSYPAVCEFLQNNNLLSIIRAHEAQDAGYRMYRKSQTT 302 (517)
T ss_pred ccCCCccCcchhhhccChhhhccccccccccccCccccccceechHHHHHHHHhCCchhhhhhhhhhhhhhhhhhccccc
Confidence 999999999999999999652 2233 4579999999999999999999999999999999999987664
Q ss_pred --CeeEEEEecCCccccCCCcEEEEEEcCCCCeEEEEEecCCCCCCC
Q 023226 230 --QKVVTIFSAPNYCYRCGNMASILEVDDCKGHTFIQFEPAPRRGEP 274 (285)
Q Consensus 230 --~~~itifSa~~y~~~~~n~~a~l~i~~~~~~~~~~~~~~~~~~~~ 274 (285)
..+|||||||||.+.++|+||||+.++| .+.++||.++|+|.-.
T Consensus 303 GFPSLiTiFSAPNYLDvYnNKAAvLKYEnN-VMNIRQFncSPHPYWL 348 (517)
T KOG0375|consen 303 GFPSLITIFSAPNYLDVYNNKAAVLKYENN-VMNIRQFNCSPHPYWL 348 (517)
T ss_pred CCchheeeecCCchhhhhccHHHHhhhhcc-cceeeccCCCCCCccc
Confidence 3589999999999999999999998765 6899999999998543
No 17
>KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms]
Probab=100.00 E-value=7e-55 Score=396.72 Aligned_cols=269 Identities=32% Similarity=0.637 Sum_probs=239.7
Q ss_pred HHHHHHHHHHHHhcCCCccccC----CcEEEEecCCCCHHHHHHHHHhcCCCC-CCcEEEeCCccCCCCChHHHHHHHHh
Q 023226 4 VRVLCEKAKEILMDESNVQPVK----SPVTICGDIHGQFHDLAELFRIGGKCP-DTNYLFMGDYVDRGYYSVETVTLLVS 78 (285)
Q Consensus 4 ~~~l~~~~~~il~~e~~~~~~~----~~i~vvGDiHG~~~~l~~il~~~~~~~-~~~~vflGD~vDrG~~s~evl~~l~~ 78 (285)
++.|+.+|+++|++.|++-+++ ..|.|+||+||.++||.-+|.+.|.|. ...|||.||+||||.+|+|||..|++
T Consensus 139 Vl~iL~EakK~lkqmPnis~isTs~S~qVTiCGDLHGklDDL~~I~yKNGlPS~~npYvFNGDFVDRGk~siEvLmiL~a 218 (631)
T KOG0377|consen 139 VLLILREAKKSLKQMPNISRISTSVSQQVTICGDLHGKLDDLLVILYKNGLPSSSNPYVFNGDFVDRGKRSIEVLMILFA 218 (631)
T ss_pred HHHHHHHHHHHHHhCCCCCccccccccceEEeccccccccceEEEEecCCCCCCCCCeeecCchhhccccchhhHHHHHH
Confidence 6789999999999999998875 479999999999999999999999986 45699999999999999999999999
Q ss_pred ccccCCCcEEEeCCCchhhhhhhhhCChHHHHHHhCC--hhHHHHHHHHHhhCCceeEEeceEEEecCCCCCCCCchhhh
Q 023226 79 LKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGN--ANVWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNI 156 (285)
Q Consensus 79 lk~~~p~~v~~lrGNHE~~~~~~~~~f~~e~~~~~~~--~~~~~~~~~~~~~lP~~~~i~~~~l~vHgGi~~~~~~~~~i 156 (285)
+-+.||..+++-|||||..++|..|||..|...||.. .++.+.+.++|++||++.+++.++|.||||+|.. +.++-+
T Consensus 219 ~~lv~P~~~~LNRGNHED~mmNlRYGF~kEv~~KYk~~~k~Ilr~leevy~WLPi~tiid~~ilvvHGGiSd~-Tdl~ll 297 (631)
T KOG0377|consen 219 LYLVYPNAVHLNRGNHEDHMMNLRYGFIKEVESKYKRHGKRILRFLEEVYRWLPIGTIIDSRILVVHGGISDS-TDLDLL 297 (631)
T ss_pred HHhcCchhhhccCCchHHHHHHHHHhHHHHHHHHhhhcccHHHHHHHHHHHhcchhhhcccceEEEecCcccc-hhHHHH
Confidence 9999999999999999999999999999999999964 5788899999999999999999999999999754 456666
Q ss_pred hhccccc-----cCCCC-----------------CccccccccCCCCCCCCccC-CCCCccccCHHHHHHHHHHCCCeEE
Q 023226 157 RNFDRVQ-----EVPHE-----------------GPMCDLLWSDPDDRCGWGIS-PRGAGYTFGQDISEQFNHTNNLKLI 213 (285)
Q Consensus 157 ~~i~r~~-----~~~~~-----------------~~~~dllWsdp~~~~~~~~~-~rg~~~~fg~~~~~~fl~~~~~~~i 213 (285)
.+++|.. .+|.+ ..+.|++||||....|..+| -||.|++||++.+.+||++.+++++
T Consensus 298 ~kIeR~k~~Svlrpp~ek~~d~e~~s~~vg~dEW~Qi~DImWSDP~~~~GC~pNt~RGgG~yFGpDvT~~~Lqk~~l~~l 377 (631)
T KOG0377|consen 298 DKIERGKYVSVLRPPTEKGRDGEKLSKAVGVDEWQQIFDIMWSDPQATMGCVPNTLRGGGCYFGPDVTDNFLQKHRLSYL 377 (631)
T ss_pred hhhhccceeEEecCCcccCccCCchhhhcChHHHHHHHHHHhcCcccccCCCcccccCCcceeCchHHHHHHHHhCceee
Confidence 6666532 11110 13578999999987775554 6999999999999999999999999
Q ss_pred EeeceeeecceEEecCCeeEEEEecCCccccCCCcEEEEEEcCCCCeEEEEEecCCCCCC
Q 023226 214 ARAHQLVMEGYNWGHEQKVVTIFSAPNYCYRCGNMASILEVDDCKGHTFIQFEPAPRRGE 273 (285)
Q Consensus 214 irgH~~~~~G~~~~~~~~~itifSa~~y~~~~~n~~a~l~i~~~~~~~~~~~~~~~~~~~ 273 (285)
||+|+|.++||++.++++++|||||+||-...+|+||++++.+.....|+||.+...+.+
T Consensus 378 iRSHECKpeGyEf~Hd~kvlTiFSASNYYe~GSNrGAYikl~~~~~PhfvQY~a~k~t~~ 437 (631)
T KOG0377|consen 378 IRSHECKPEGYEFCHDNKVLTIFSASNYYEIGSNRGAYIKLGNQLTPHFVQYQAAKQTKR 437 (631)
T ss_pred eeecccCCCcceeeeCCeEEEEEeccchheecCCCceEEEeCCCCCchHHHHHhhhhhhh
Confidence 999999999999999999999999999988889999999999999999999998765543
No 18
>KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only]
Probab=100.00 E-value=5e-50 Score=371.87 Aligned_cols=273 Identities=39% Similarity=0.762 Sum_probs=254.1
Q ss_pred HHHHHHHHHHhcCCCccccC----CcEEEEecCCCCHHHHHHHHHhcCCCC-CCcEEEeCCccCCCCChHHHHHHHHhcc
Q 023226 6 VLCEKAKEILMDESNVQPVK----SPVTICGDIHGQFHDLAELFRIGGKCP-DTNYLFMGDYVDRGYYSVETVTLLVSLK 80 (285)
Q Consensus 6 ~l~~~~~~il~~e~~~~~~~----~~i~vvGDiHG~~~~l~~il~~~~~~~-~~~~vflGD~vDrG~~s~evl~~l~~lk 80 (285)
.|++.+++++..+|++++++ ..+.++||+||++.++.++++..|.++ ...++|.||++|||..|.|+...+...|
T Consensus 190 ~i~~~~~~~~~~l~~~ve~~~~~d~~~sv~gd~hGqfydl~nif~l~g~Ps~t~~ylfngdfv~rgs~s~e~~~~~~~~k 269 (476)
T KOG0376|consen 190 SILDLAKTILRKLPSLVEISVPGDVKISVCGDTHGQFYDLLNIFELNGLPSETNPYLFNGDFVDRGSWSVEVILTLFAFK 269 (476)
T ss_pred eeHHHHhhHHhcCCcceEeecCCCceEEecCCccccccchhhhHhhcCCCCCcccccccCceeeecccceeeeeeehhhc
Confidence 57889999999999998764 469999999999999999999998875 5679999999999999999999999999
Q ss_pred ccCCCcEEEeCCCchhhhhhhhhCChHHHHHHhCChhHHHHHHHHHhhCCceeEEeceEEEecCCCC-CCCCchhhhhhc
Q 023226 81 VRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALVESEIFCLHGGLS-PSIETLDNIRNF 159 (285)
Q Consensus 81 ~~~p~~v~~lrGNHE~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~l~vHgGi~-~~~~~~~~i~~i 159 (285)
+.+|++++++|||||...++..|||..++..+|. .+.+..+.+.|..||++..|+++++.+|||+. +.-..++++++|
T Consensus 270 l~~pn~~fl~rgn~Es~~m~~iy~f~~e~~~kyt-e~~~~~f~~~f~~LPl~~~i~~~~~~~hgglf~~~~v~l~d~r~i 348 (476)
T KOG0376|consen 270 LLYPNNFFLLRGNHESDNMNKIYGFEGEVKAKYT-EEMFNLFSEVFIWLPLAHLINNKVLVMHGGLFSPDGVTLEDFRNI 348 (476)
T ss_pred ccCCcceeeccCCccchHHHHHhCCCcchhhhhH-HHHHHhhhhhhccccchhhhcCceEEEecCcCCCCCccHHHHHhh
Confidence 9999999999999999999999999999999995 45666666999999999999999999999984 555689999999
Q ss_pred cccccCCCCCccccccccCCCCCCCCccCCCCCccccCHHHHHHHHHHCCCeEEEeeceeeecceEEecCCeeEEEEecC
Q 023226 160 DRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMEGYNWGHEQKVVTIFSAP 239 (285)
Q Consensus 160 ~r~~~~~~~~~~~dllWsdp~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iirgH~~~~~G~~~~~~~~~itifSa~ 239 (285)
.|+...|.++.+++++||||....+..+|.||.|..||.+++.+||+.|+++.|||||+..+.||+..++|+|+||||||
T Consensus 349 ~r~~~~~~~~~~~~~lws~pq~~~g~s~S~r~~g~~fG~d~t~~f~~~n~l~~i~rshe~~d~gy~~eh~g~l~tvfsap 428 (476)
T KOG0376|consen 349 DRFEQPPEEGLMCELLWSDPQPANGRSPSKRGVGLQFGPDVTERFLQDNNLDKIIRSHEVKDEGYEVEHSGKLITVFSAP 428 (476)
T ss_pred hhccCCcccccccccccCCCccccCCCccccCceeeeCCCchhhHHhhcchHHHhhccccCCCceeeecCCcEEEEecCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCCcEEEEEEc-CCCCeEEEEEecCCCCCCCCCCCC
Q 023226 240 NYCYRCGNMASILEVD-DCKGHTFIQFEPAPRRGEPDVTRR 279 (285)
Q Consensus 240 ~y~~~~~n~~a~l~i~-~~~~~~~~~~~~~~~~~~~~~~~~ 279 (285)
|||++.+|.||++.++ ++++..+++|++.|++.-+++.-+
T Consensus 429 nycd~~~n~ga~i~~~~~~~~p~~~~~e~vp~~~~~~ma~~ 469 (476)
T KOG0376|consen 429 NYCDQMGNKGAFIHLEPDDLTPNFYTFEAVPHPDVKPMAYA 469 (476)
T ss_pred chhhhcCCcceEEEecCCCCccceeecccCCCCCCCCcccc
Confidence 9999999999999999 789999999999999977766533
No 19
>cd00144 MPP_PPP_family phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain. The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate
Probab=100.00 E-value=9.6e-37 Score=266.43 Aligned_cols=214 Identities=46% Similarity=0.785 Sum_probs=175.2
Q ss_pred EEEecCCCCHHHHHHHHHhcCCCCCCcEEEeCCccCCCCChHHHHHHHHhccccCCCcEEEeCCCchhhhhhhhhCChHH
Q 023226 29 TICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDE 108 (285)
Q Consensus 29 ~vvGDiHG~~~~l~~il~~~~~~~~~~~vflGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~f~~e 108 (285)
+|||||||++++|.++++..+..+.+.+|||||+||||+.+.+++.++.+++.. |.++++|+||||.+.++...++..+
T Consensus 1 ~~igDiHg~~~~l~~~l~~~~~~~~d~li~lGD~vdrg~~~~~~l~~l~~~~~~-~~~~~~l~GNHe~~~~~~~~~~~~~ 79 (225)
T cd00144 1 YVIGDIHGCLDDLLRLLEKIGFPPNDKLIFLGDYVDRGPDSVEVIDLLLALKIL-PDNVILLRGNHEDMLLNFLYGFYDE 79 (225)
T ss_pred CEEeCCCCCHHHHHHHHHHhCCCCCCEEEEECCEeCCCCCcHHHHHHHHHhcCC-CCcEEEEccCchhhhhhhhcCCcch
Confidence 589999999999999999999888899999999999999999999999999877 8889999999999998876665433
Q ss_pred H--------HHHhCChhHHHHHHHHHhhCCceeEEec-eEEEecCCCCCCCCchhhhhhccccccCCCCCccccccccCC
Q 023226 109 C--------LRKYGNANVWKIFTDLFDYFPLTALVES-EIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDP 179 (285)
Q Consensus 109 ~--------~~~~~~~~~~~~~~~~~~~lP~~~~i~~-~~l~vHgGi~~~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp 179 (285)
. ...+.....+..+.+++.+||+++.++. +++|||||++|.....++.. ..+.+....+++|+||
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~vHag~~~~~~~~~~~~------~~~~~~~~~~~lw~r~ 153 (225)
T cd00144 80 DEWIGGTLRLLKKLGEDLWEEFNDVFFYLPLAALIETKKVLCVHGGLSPGLPLEEQIK------EEPEDQLPEDLLWSDP 153 (225)
T ss_pred hhccchhHHHHHhhCHHHHHHHHHHHHhCcHheEeCCCeEEEEeCCCCCccchHHhhh------cCcccccceeeeecCC
Confidence 2 2233345678888999999999998865 99999999999876554443 2233445688999999
Q ss_pred CCCCCC-ccCCCCCccccCHHHHHHHHHHCCCeEEEeeceeeecceEEecCCeeEEEEecCCccccCCCcEEEEE
Q 023226 180 DDRCGW-GISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMEGYNWGHEQKVVTIFSAPNYCYRCGNMASILE 253 (285)
Q Consensus 180 ~~~~~~-~~~~rg~~~~fg~~~~~~fl~~~~~~~iirgH~~~~~G~~~~~~~~~itifSa~~y~~~~~n~~a~l~ 253 (285)
.....+ ..+.++. |+++.+.|+..++.+.||+||+++..|+.....++++||+|++.|++..+|..+++.
T Consensus 154 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ii~GHt~~~~~~~~~~~~~~i~IDtg~~~~~~~~~~l~~~~ 224 (225)
T cd00144 154 LELPGGFGSSRRGG----GPDAVEWFLKKNGLKLIVRGHTPVEEGYEFGHDGNLITIDSGCNYCGGGGNKLAALV 224 (225)
T ss_pred CCCCCCCcCCCCCC----CHHHHHHHHHHCCCeEEEEcCccccCccEEcCCCCEEEEecCCcccCCCCccEEEEe
Confidence 764332 2233333 999999999999999999999999998765678899999999999877677776653
No 20
>PRK13625 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional
Probab=99.96 E-value=4.1e-28 Score=215.39 Aligned_cols=194 Identities=20% Similarity=0.307 Sum_probs=132.3
Q ss_pred CcEEEEecCCCCHHHHHHHHHhcCCC---------CCCcEEEeCCccCCCCChHHHHHHHHhccccCCCcEEEeCCCchh
Q 023226 26 SPVTICGDIHGQFHDLAELFRIGGKC---------PDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHES 96 (285)
Q Consensus 26 ~~i~vvGDiHG~~~~l~~il~~~~~~---------~~~~~vflGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~ 96 (285)
++++||||||||++.|.++|+++++. ..+++|||||||||||+|.+|+++++++. .+.++++||||||.
T Consensus 1 ~~~~vIGDIHG~~~~L~~lL~~~~~~~~~~~~~~~~~d~li~lGDliDRGp~S~~vl~~~~~~~--~~~~~~~l~GNHE~ 78 (245)
T PRK13625 1 MKYDIIGDIHGCYQEFQALTEKLGYNWSSGLPVHPDQRKLAFVGDLTDRGPHSLRMIEIVWELV--EKKAAYYVPGNHCN 78 (245)
T ss_pred CceEEEEECccCHHHHHHHHHHcCCCcccCcccCCCCCEEEEECcccCCCcChHHHHHHHHHHh--hCCCEEEEeCccHH
Confidence 47999999999999999999998874 45789999999999999999999999885 34579999999999
Q ss_pred hhhhhhhC-------ChHHHHHHhCC------hhHHHHHHHHHhhCCceeEEe-ceEEEecCCCCCCCCchhhhhhcccc
Q 023226 97 RQITQVYG-------FYDECLRKYGN------ANVWKIFTDLFDYFPLTALVE-SEIFCLHGGLSPSIETLDNIRNFDRV 162 (285)
Q Consensus 97 ~~~~~~~~-------f~~e~~~~~~~------~~~~~~~~~~~~~lP~~~~i~-~~~l~vHgGi~~~~~~~~~i~~i~r~ 162 (285)
++++...+ ...+....|.. ..+.+.+.+|++++|++..+. ++++|||||+.|....... ..
T Consensus 79 ~~l~~~~~~~~~~~~gg~~tl~~~~~~~~~~~~~~~~~~~~~~~~lPl~~~~~~~~~~~vHAG~~~~~~~~~~-~~---- 153 (245)
T PRK13625 79 KLYRFFLGRNVTIAHGLETTVAEYEALPSHKQNMIKEKFITLYEQAPLYHILDEGRLVVAHAGIRQDYIGRQD-KK---- 153 (245)
T ss_pred HHHHHHhCCCccccchhHhHHHHHhccChhhHHHHHHHHHHHHHhCCceEEEeCCCEEEEECCCChHhcccch-hh----
Confidence 98875432 12234444431 246678899999999987663 6799999999876311000 00
Q ss_pred ccCCCCCccccccccC--------CCC-CCCCccCCCCCccccCHHHHHHHHHHCCCeEEEeeceeeecceEEecCCeeE
Q 023226 163 QEVPHEGPMCDLLWSD--------PDD-RCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMEGYNWGHEQKVV 233 (285)
Q Consensus 163 ~~~~~~~~~~dllWsd--------p~~-~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iirgH~~~~~G~~~~~~~~~i 233 (285)
....++|++ +.. ...|..+. .+.+.+|.||+++..... .++.+
T Consensus 154 -------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~------------------~g~~~vV~GHtp~~~~~~---~~~~i 205 (245)
T PRK13625 154 -------VQTFVLYGDITGEKHPDGSPVRRDWAKEY------------------KGTAWIVYGHTPVKEPRF---VNHTV 205 (245)
T ss_pred -------hhhHHhhccccCCcCCCCCeeeeccchhc------------------CCCcEEEECCCCCcccee---cCCeE
Confidence 112334542 111 12232211 244679999999865432 24567
Q ss_pred EEEecCCccccCCCcEEEEEEcCCC
Q 023226 234 TIFSAPNYCYRCGNMASILEVDDCK 258 (285)
Q Consensus 234 tifSa~~y~~~~~n~~a~l~i~~~~ 258 (285)
-|.+..-| +++=+++.+.+..
T Consensus 206 ~IDtGa~~----gG~Ltal~l~~~~ 226 (245)
T PRK13625 206 NIDTGCVF----GGRLTALRYPEME 226 (245)
T ss_pred EEECcCcc----CCEEEEEECCCCc
Confidence 77766544 3444556776543
No 21
>cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain. This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metal
Probab=99.95 E-value=1.1e-27 Score=207.75 Aligned_cols=178 Identities=21% Similarity=0.299 Sum_probs=130.8
Q ss_pred EEEecCCCCHHHHHHHHHhcCC--------CCCCcEEEeCCccCCCCChHHHHHHHHhcccc---CCCcEEEeCCCchhh
Q 023226 29 TICGDIHGQFHDLAELFRIGGK--------CPDTNYLFMGDYVDRGYYSVETVTLLVSLKVR---YPQRITILRGNHESR 97 (285)
Q Consensus 29 ~vvGDiHG~~~~l~~il~~~~~--------~~~~~~vflGD~vDrG~~s~evl~~l~~lk~~---~p~~v~~lrGNHE~~ 97 (285)
+||||||||+++|.++|+.++. .+.+.++++||+||||+++.+++++|++++.. .+.++++|+||||.+
T Consensus 1 ~vi~DIHG~~~~l~~ll~~~~~~~~~~~~~~~~d~lv~lGD~vdrG~~~~~vl~~l~~l~~~~~~~~~~v~~l~GNHE~~ 80 (208)
T cd07425 1 VAIGDLHGDLDAFREILKGAGVIDSNDHWIGGSTHLVQLGDIFDRGPDVIEILWLLYKLEQEAAKAGGKVHFLLGNHELM 80 (208)
T ss_pred CEEeCccCCHHHHHHHHHHCCCCCccccccCCCcEEEEECCCcCCCcCHHHHHHHHHHHHHHHHhcCCeEEEeeCCCcHH
Confidence 5899999999999999998874 35778999999999999999999999998754 456799999999999
Q ss_pred hhhhhhCChHH-HHHHhCC--------hhHHHHHHHHHhhCCceeEEeceEEEecCCCCCCCCchhhhhhccccccCCCC
Q 023226 98 QITQVYGFYDE-CLRKYGN--------ANVWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHE 168 (285)
Q Consensus 98 ~~~~~~~f~~e-~~~~~~~--------~~~~~~~~~~~~~lP~~~~i~~~~l~vHgGi~~~~~~~~~i~~i~r~~~~~~~ 168 (285)
.++..+.+... ....... ......+.+|++++|+...+ ++++|||||++|
T Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~lP~~~~~-~~~~fvHag~~~-------------------- 139 (208)
T cd07425 81 NLCGDFRYVHPKYFNEFGGLAMRRRELFSPGGELGRWLRSKPVIVKV-NDTLFVHGGLGP-------------------- 139 (208)
T ss_pred HHcchhccCChhHHHHHHhhhhhHHHhcCCccHHHHHHHhCCeEEEE-CCEEEEeCCcHH--------------------
Confidence 98754433211 1111100 11223558899999999876 579999999933
Q ss_pred CccccccccCCCCCCCCccCCCCCccccCHHHHHHHHHHCCCeEEEeeceeeecceEEecCCeeEEEEecCC
Q 023226 169 GPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMEGYNWGHEQKVVTIFSAPN 240 (285)
Q Consensus 169 ~~~~dllWsdp~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iirgH~~~~~G~~~~~~~~~itifSa~~ 240 (285)
+|++.-... .... .-+...+.++++.++.++||+|||+++.|....+++++++|.+...
T Consensus 140 ------~w~r~y~~~----~~~~---~~~~~~~~~~l~~~~~~~iv~GHTh~~~~~~~~~~g~~i~ID~g~~ 198 (208)
T cd07425 140 ------LWYRGYSKE----TSDK---ECAAAHLDKVLERLGAKRMVVGHTPQEGGIVTFCGGKVIRIDVGMS 198 (208)
T ss_pred ------HHhhHhhhh----hhhc---cchHHHHHHHHHHcCCCeEEEcCeeeecCceEEECCEEEEEeCCcc
Confidence 343210000 0000 0122567888999999999999999998876688999999998644
No 22
>cd07423 MPP_PrpE Bacillus subtilis PrpE and related proteins, metallophosphatase domain. PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/Prp
Probab=99.94 E-value=4.4e-26 Score=201.09 Aligned_cols=123 Identities=24% Similarity=0.461 Sum_probs=98.3
Q ss_pred CcEEEEecCCCCHHHHHHHHHhcCCCC----------CCcEEEeCCccCCCCChHHHHHHHHhccccCCCcEEEeCCCch
Q 023226 26 SPVTICGDIHGQFHDLAELFRIGGKCP----------DTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHE 95 (285)
Q Consensus 26 ~~i~vvGDiHG~~~~l~~il~~~~~~~----------~~~~vflGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE 95 (285)
+|+.||||||||+.+|.++|+++++.+ .++++|||||||||++|.+|+++|++++.. .++++|+||||
T Consensus 1 ~~i~vigDIHG~~~~L~~ll~~~~~~~~~~~~~~~~~~d~lv~lGDlIDrG~~s~evl~~l~~l~~~--~~~~~v~GNHE 78 (234)
T cd07423 1 GPFDIIGDVHGCYDELEELLEKLGYRIKRVGTVTHPEGRRAVFVGDLVDRGPDSPEVLRLVMSMVAA--GAALCVPGNHD 78 (234)
T ss_pred CCeEEEEECCCCHHHHHHHHHHcCCccccCccccCCCCCEEEEECCccCCCCCHHHHHHHHHHHhhC--CcEEEEECCcH
Confidence 589999999999999999999987653 468999999999999999999999998643 46999999999
Q ss_pred hhhhhhhhCC-------hHHHHHHhC--ChhHHHHHHHHHhhCCceeEEe-ceEEEecCCCCCCC
Q 023226 96 SRQITQVYGF-------YDECLRKYG--NANVWKIFTDLFDYFPLTALVE-SEIFCLHGGLSPSI 150 (285)
Q Consensus 96 ~~~~~~~~~f-------~~e~~~~~~--~~~~~~~~~~~~~~lP~~~~i~-~~~l~vHgGi~~~~ 150 (285)
.++++...+. ..++...+. ...+.+.+.+||++||+...++ ++++|||||+++..
T Consensus 79 ~~l~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~l~~lP~~~~~~~~~~~~vHag~~~~~ 143 (234)
T cd07423 79 NKLYRKLQGRNVKITHGLEETVAQLEAESEEFKEEVIEFYESLPSHLVLDEGKLVVAHAGIKEEM 143 (234)
T ss_pred HHHHHHhcCCCccccCcccchHHHHhhccHHHHHHHHHHHHhCCcEEEeCCCcEEEEeCCCChHh
Confidence 9988754321 122233332 2356678899999999987764 47999999987653
No 23
>cd07413 MPP_PA3087 Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain. PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of
Probab=99.94 E-value=8.7e-26 Score=197.65 Aligned_cols=116 Identities=24% Similarity=0.348 Sum_probs=92.9
Q ss_pred EEEecCCCCHHHHHHHHHhcCCC--------CCCcEEEeCCccCCCCChHHHHHHHHhccccCCCcEEEeCCCchhhhhh
Q 023226 29 TICGDIHGQFHDLAELFRIGGKC--------PDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQIT 100 (285)
Q Consensus 29 ~vvGDiHG~~~~l~~il~~~~~~--------~~~~~vflGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~ 100 (285)
+||||||||++.|.++|+++++. +.+++|||||||||||+|.+|+++|++++.. .++++|+||||.+++.
T Consensus 2 ~vIGDIHG~~~~L~~lL~~i~~~~~~~~~~~~~d~lvflGD~IDRGp~S~~vl~~l~~l~~~--~~~~~l~GNHE~~ll~ 79 (222)
T cd07413 2 DFIGDIHGHAEKLVVLLHKLGYQELSGVYRHPERQVVFLGDLIDRGPEIRELLEIVKSMVDA--GHALAVMGNHEFNAIA 79 (222)
T ss_pred EEEEeccCCHHHHHHHHHHcCCCccccccCCCCCEEEEeCcccCCCCCHHHHHHHHHHhhcC--CCEEEEEccCcHHHHH
Confidence 68999999999999999998764 4678999999999999999999999998643 4799999999999876
Q ss_pred hhhCC------h-----------HHHHHHhC-ChhHHHHHHHHHhhCCceeEEeceEEEecCCCC
Q 023226 101 QVYGF------Y-----------DECLRKYG-NANVWKIFTDLFDYFPLTALVESEIFCLHGGLS 147 (285)
Q Consensus 101 ~~~~f------~-----------~e~~~~~~-~~~~~~~~~~~~~~lP~~~~i~~~~l~vHgGi~ 147 (285)
...+. . .+....++ ..+..+...+||++||++... ++++|||||+.
T Consensus 80 ~~~~~~~~~~w~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~lP~~~~~-~~~~~VHAg~~ 143 (222)
T cd07413 80 WHTKDPSGGEWLRAHSKKNLRQHQAFLEQFREHSEEHKDWLEWFKTLPLFLDL-GGVRVVHACWD 143 (222)
T ss_pred hhhCCcccchhhhcCCCcccccHHHHHHHHhccchhHHHHHHHHhcCCcEEEE-CCEEEEECCcC
Confidence 43221 0 12233332 234567889999999998764 78999999985
No 24
>PRK00166 apaH diadenosine tetraphosphatase; Reviewed
Probab=99.94 E-value=1.2e-25 Score=202.08 Aligned_cols=226 Identities=19% Similarity=0.268 Sum_probs=146.3
Q ss_pred CcEEEEecCCCCHHHHHHHHHhcCCC-CCCcEEEeCCccCCCCChHHHHHHHHhccccCCCcEEEeCCCchhhhhhhhhC
Q 023226 26 SPVTICGDIHGQFHDLAELFRIGGKC-PDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYG 104 (285)
Q Consensus 26 ~~i~vvGDiHG~~~~l~~il~~~~~~-~~~~~vflGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~ 104 (285)
|+++||||||||+++|.++|+++++. ..+.++|+||+|||||+|.+|++++.++. .++++|+||||.+.+...++
T Consensus 1 M~~~vIGDIHG~~~~l~~ll~~~~~~~~~D~li~lGDlVdrGp~s~~vl~~l~~l~----~~~~~VlGNHD~~ll~~~~g 76 (275)
T PRK00166 1 MATYAIGDIQGCYDELQRLLEKIDFDPAKDTLWLVGDLVNRGPDSLEVLRFVKSLG----DSAVTVLGNHDLHLLAVAAG 76 (275)
T ss_pred CcEEEEEccCCCHHHHHHHHHhcCCCCCCCEEEEeCCccCCCcCHHHHHHHHHhcC----CCeEEEecChhHHHHHhhcC
Confidence 57999999999999999999999864 56789999999999999999999999873 46999999999998877666
Q ss_pred ChH----HHHHHhCChhHHHHHHHHHhhCCceeEE-eceEEEecCCCCCCCCchhhhhhccccc---cCCC-CCcccccc
Q 023226 105 FYD----ECLRKYGNANVWKIFTDLFDYFPLTALV-ESEIFCLHGGLSPSIETLDNIRNFDRVQ---EVPH-EGPMCDLL 175 (285)
Q Consensus 105 f~~----e~~~~~~~~~~~~~~~~~~~~lP~~~~i-~~~~l~vHgGi~~~~~~~~~i~~i~r~~---~~~~-~~~~~dll 175 (285)
... ....++......+.+.+|++++|+...+ ++++++||||++|.+...+.....+... ..+. ...+..+.
T Consensus 77 ~~~~~~~~~l~~~l~~~~~~~~~~~L~~lPl~~~~~~~~~l~vHAGi~p~~~~~~~~~~a~eve~~l~~~~~~~~~~~my 156 (275)
T PRK00166 77 IKRNKKKDTLDPILEAPDRDELLDWLRHQPLLHVDEELGLVMVHAGIPPQWDLATALALAREVEAVLRSDDYRDFLANMY 156 (275)
T ss_pred CccccchhHHHHHHccccHHHHHHHHHCCCcEEEECCCCEEEEccCCCCCCCHHHHHHHHHHHHHHhcCCcHHHHHHHhc
Confidence 431 2223332334456788999999998765 5679999999999885433222111111 1111 11233444
Q ss_pred ccCCCCCCCCccCCCCCc-cccCHHHH--HHHHHH-----------------------------CCCeEEEeeceeeecc
Q 023226 176 WSDPDDRCGWGISPRGAG-YTFGQDIS--EQFNHT-----------------------------NNLKLIARAHQLVMEG 223 (285)
Q Consensus 176 Wsdp~~~~~~~~~~rg~~-~~fg~~~~--~~fl~~-----------------------------~~~~~iirgH~~~~~G 223 (285)
|+.|. .|..+-.|.. ..+--.++ -+||.. ..-..||-||.....|
T Consensus 157 ~~~p~---~W~~~l~~~~r~r~~~n~~trmR~~~~~g~l~~~~k~~~~~~~~~~~pWf~~~~~~~~~~~i~fGHwa~l~G 233 (275)
T PRK00166 157 GNEPD---RWSPDLTGLERLRYIINAFTRMRFCTPDGRLDFKCKGPPDEAPAGLKPWFEVPGRKTRDYTIVFGHWAALEG 233 (275)
T ss_pred CCCcC---ccCcccCchHHHHHHHHHHhhhhcccCCCceeecccCCcccCCcCCCCCccCcCccCCCCeEEEecCcccCC
Confidence 54442 2333322221 11111111 111111 1234799999998778
Q ss_pred eEEecCCeeEEEEecCCccccCCCcEEEEEEcCCCCeEEEEEec
Q 023226 224 YNWGHEQKVVTIFSAPNYCYRCGNMASILEVDDCKGHTFIQFEP 267 (285)
Q Consensus 224 ~~~~~~~~~itifSa~~y~~~~~n~~a~l~i~~~~~~~~~~~~~ 267 (285)
... ...++.+.+.--+ +++=..|++++. ++.|.++
T Consensus 234 ~~~--~~~~~~LDtGcvw----gg~Lta~~l~~~---~~~~~~~ 268 (275)
T PRK00166 234 LTT--PPNIIALDTGCVW----GGKLTALRLEDK---QIFQVPC 268 (275)
T ss_pred ccC--CCCeEEeeccccc----CCeEEEEEeCCC---cEEEEeC
Confidence 754 6778889876443 445566788743 3455544
No 25
>cd07421 MPP_Rhilphs Rhilph phosphatases, metallophosphatase domain. Rhilphs (Rhizobiales/ Rhodobacterales/ Rhodospirillaceae-like phosphatases) are a phylogenetically distinct group of PPP (phosphoprotein phosphatases), found only in land plants. They are named for their close relationship to to PPP phosphatases from alpha-Proteobacteria, including Rhizobiales, Rhodobacterales and Rhodospirillaceae. The PPP (phosphoprotein phosphatase) family, to which the Rhilphs belong, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central rol
Probab=99.93 E-value=3.4e-25 Score=198.11 Aligned_cols=198 Identities=18% Similarity=0.253 Sum_probs=136.2
Q ss_pred cEEEEecCCCCHHHHHHHHHhcCCC------CCCcEEEeCCccCCCCChHHHHHHHHhccccCCC-cEEEeCCCchhhhh
Q 023226 27 PVTICGDIHGQFHDLAELFRIGGKC------PDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQ-RITILRGNHESRQI 99 (285)
Q Consensus 27 ~i~vvGDiHG~~~~l~~il~~~~~~------~~~~~vflGD~vDrG~~s~evl~~l~~lk~~~p~-~v~~lrGNHE~~~~ 99 (285)
++++||||||+++.|+++|+.+... ..+.+|||||||||||+|.+|+++|.+++..+|. ++++|+||||.+++
T Consensus 3 ~iyaIGDIHG~~d~L~~lL~~I~~d~~~~~~~~~~iVfLGDyVDRGPdS~eVld~L~~l~~~~~~~~vv~LrGNHE~~~l 82 (304)
T cd07421 3 VVICVGDIHGYISKLNNLWLNLQSALGPSDFASALVIFLGDYCDRGPETRKVIDFLISLPEKHPKQRHVFLCGNHDFAFA 82 (304)
T ss_pred eEEEEEeccCCHHHHHHHHHHhhhhcCcCcCCCcEEEEeCCcCCCCCCHHHHHHHHHHhhhcccccceEEEecCChHHHH
Confidence 6999999999999999999865421 2456999999999999999999999999988876 68899999998876
Q ss_pred hhhhC-----------------------------------------C----------------------hHHHHHHhCCh
Q 023226 100 TQVYG-----------------------------------------F----------------------YDECLRKYGNA 116 (285)
Q Consensus 100 ~~~~~-----------------------------------------f----------------------~~e~~~~~~~~ 116 (285)
..... | ..++...||-.
T Consensus 83 ~fL~~~p~~~d~~~f~~~w~~~~~~~e~~~~~~~~~~~~~h~~g~~W~~~~~~~~~~~~~~~~~~~~~gg~~Tl~SYGv~ 162 (304)
T cd07421 83 AFLGVLPRPSDGSEFKSTWKEYEKNEEREGWYKGEGFENMHLQGRRWAGKMKVTFNTVRGEPYKGSIYDARPTFESYGVP 162 (304)
T ss_pred hHhhcCCCccchhhhhhhhccccccccccccccccccccccccccchhhhccccccccccccccccccCcHHHHHHcCCC
Confidence 54321 0 12344555522
Q ss_pred --------hHHHHHHHHHhhCCceeEEeceE-------------EEecCCCCCCCCchhhhhhcc-ccccCCCCCccccc
Q 023226 117 --------NVWKIFTDLFDYFPLTALVESEI-------------FCLHGGLSPSIETLDNIRNFD-RVQEVPHEGPMCDL 174 (285)
Q Consensus 117 --------~~~~~~~~~~~~lP~~~~i~~~~-------------l~vHgGi~~~~~~~~~i~~i~-r~~~~~~~~~~~dl 174 (285)
.+.+...+|++.||..... +++ +|||||+.|..+.-+|.+.+. +-...| -.++
T Consensus 163 ~~~~~l~~avP~~H~~fl~~l~~~~~~-~~~~~~~~~g~~~~~lifVHAGlrPg~pLe~Q~~~L~~~d~~~p----~~~~ 237 (304)
T cd07421 163 HGSSDLIKAVPEEHKKFLRNLVWVHEE-DDVCIETEEGLKHCKLIAVHAGLEKSNSVEEQLKLLRTKDTSIP----KIAP 237 (304)
T ss_pred cchHHHHHhCCHHHHHHHHhCCceEEe-CcccccccccccccceEEEEcccCCCCChHHhhhhhhccccccc----cccc
Confidence 3455678999999998664 556 999999999998777776543 112222 2378
Q ss_pred cccCCCCCCCCccCCCCCccccCHHHHHHHHHHCCCeEEEeeceeeecceEEecCCeeEEEEecCCccccCCCcEEEEEE
Q 023226 175 LWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMEGYNWGHEQKVVTIFSAPNYCYRCGNMASILEV 254 (285)
Q Consensus 175 lWsdp~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iirgH~~~~~G~~~~~~~~~itifSa~~y~~~~~n~~a~l~i 254 (285)
+|.+.. |...++.. ...-.+||.||+.. ....+.-|.|.+...|.+ .--|++.+
T Consensus 238 l~~R~~----f~~~~~~~--------------~~~~~~VVhGHt~~-----~~~~~~Ri~iDtGa~~~~---~l~aa~vl 291 (304)
T cd07421 238 LSGRKN----VWNIPQEL--------------ADKKTIVVSGHHGK-----LHIDGLRLIIDEGGGFDD---RPIAAIVL 291 (304)
T ss_pred cccchh----hhcCcccc--------------cCCCeEEEECCCCC-----ceecCCEEEEECCCCcCC---ceeEEEEe
Confidence 888552 22222211 00116899999922 344556667887766643 33444445
Q ss_pred c
Q 023226 255 D 255 (285)
Q Consensus 255 ~ 255 (285)
-
T Consensus 292 p 292 (304)
T cd07421 292 P 292 (304)
T ss_pred c
Confidence 3
No 26
>PHA02239 putative protein phosphatase
Probab=99.93 E-value=4.7e-25 Score=194.23 Aligned_cols=174 Identities=20% Similarity=0.276 Sum_probs=123.9
Q ss_pred CcEEEEecCCCCHHHHHHHHHhcCCC--CCCcEEEeCCccCCCCChHHHHHHHHhccccCCCcEEEeCCCchhhhhhhhh
Q 023226 26 SPVTICGDIHGQFHDLAELFRIGGKC--PDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVY 103 (285)
Q Consensus 26 ~~i~vvGDiHG~~~~l~~il~~~~~~--~~~~~vflGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~ 103 (285)
|++++||||||++..|.++++.+... +.+.++|+|||||||++|.+++..++++.. .+.++++|+||||.++++...
T Consensus 1 m~~~~IsDIHG~~~~l~~ll~~i~~~~~~~d~li~lGD~iDrG~~s~~v~~~l~~~~~-~~~~~~~l~GNHE~~~l~~~~ 79 (235)
T PHA02239 1 MAIYVVPDIHGEYQKLLTIMDKINNERKPEETIVFLGDYVDRGKRSKDVVNYIFDLMS-NDDNVVTLLGNHDDEFYNIME 79 (235)
T ss_pred CeEEEEECCCCCHHHHHHHHHHHhhcCCCCCEEEEecCcCCCCCChHHHHHHHHHHhh-cCCCeEEEECCcHHHHHHHHh
Confidence 57899999999999999999987532 467899999999999999999999988753 345799999999998765431
Q ss_pred C--------------ChHHHHHHhCCh------------------------------hHHHHHHHHHhhCCceeEEeceE
Q 023226 104 G--------------FYDECLRKYGNA------------------------------NVWKIFTDLFDYFPLTALVESEI 139 (285)
Q Consensus 104 ~--------------f~~e~~~~~~~~------------------------------~~~~~~~~~~~~lP~~~~i~~~~ 139 (285)
+ ...+++..|+.. ..+..+.+|+++||+... .+++
T Consensus 80 ~~~~~~~~~~~wl~~GG~~Tl~Syg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~lp~~~~-~~~~ 158 (235)
T PHA02239 80 NVDRLSIYDIEWLSRYCIETLNSYGVSTVTLKYSSVEENLRNNYDFIKSELKKLKESDDYRKFKILMVNCRKYYK-EDKY 158 (235)
T ss_pred CchhcccchHHHHHcCCHHHHHHcCCCCccchhhHHHHHHHHhhhhhhhhhhhcccchhhHHHHHHHHhCcceEE-ECCE
Confidence 1 112344555311 123455679999999876 4789
Q ss_pred EEecCCCCCCCCchhhhhhccccccCCCCCccccccccCCCCCCCCccCCCCCccccCHHHHHHHHHHCCCeEEEeecee
Q 023226 140 FCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQL 219 (285)
Q Consensus 140 l~vHgGi~~~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iirgH~~ 219 (285)
+|||||+.|..+..+| ...+++|.+. |.... .-+.||.|||+
T Consensus 159 ifVHAGi~p~~~~~~q--------------~~~~llWiR~-----f~~~~-------------------~g~~vV~GHTp 200 (235)
T PHA02239 159 IFSHSGGVSWKPVEEQ--------------TIDQLIWSRD-----FQPRK-------------------DGFTYVCGHTP 200 (235)
T ss_pred EEEeCCCCCCCChhhC--------------CHhHeEEecc-----cCCCC-------------------CCcEEEECCCC
Confidence 9999999888542222 1367899964 21111 12579999999
Q ss_pred eecceEEecCCeeEEEEecCC
Q 023226 220 VMEGYNWGHEQKVVTIFSAPN 240 (285)
Q Consensus 220 ~~~G~~~~~~~~~itifSa~~ 240 (285)
+..+.... .++.|.|....-
T Consensus 201 ~~~~~~~~-~~~~I~IDtGa~ 220 (235)
T PHA02239 201 TDSGEVEI-NGDMLMCDVGAV 220 (235)
T ss_pred CCCCcccc-cCCEEEeecCcc
Confidence 87654332 345677776543
No 27
>PRK11439 pphA serine/threonine protein phosphatase 1; Provisional
Probab=99.93 E-value=5.1e-25 Score=192.32 Aligned_cols=179 Identities=17% Similarity=0.175 Sum_probs=119.0
Q ss_pred CCcEEEEecCCCCHHHHHHHHHhcCCC-CCCcEEEeCCccCCCCChHHHHHHHHhccccCCCcEEEeCCCchhhhhhhhh
Q 023226 25 KSPVTICGDIHGQFHDLAELFRIGGKC-PDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVY 103 (285)
Q Consensus 25 ~~~i~vvGDiHG~~~~l~~il~~~~~~-~~~~~vflGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~ 103 (285)
.++++||||||||+++|.++|+++++. ..++++||||+|||||+|.+|+++|.+. +++.|+||||.+.++...
T Consensus 16 ~~ri~vigDIHG~~~~L~~lL~~i~~~~~~D~li~lGDlvDrGp~s~~vl~~l~~~------~~~~v~GNHE~~~l~~~~ 89 (218)
T PRK11439 16 WRHIWLVGDIHGCFEQLMRKLRHCRFDPWRDLLISVGDLIDRGPQSLRCLQLLEEH------WVRAVRGNHEQMALDALA 89 (218)
T ss_pred CCeEEEEEcccCCHHHHHHHHHhcCCCcccCEEEEcCcccCCCcCHHHHHHHHHcC------CceEeeCchHHHHHHHHH
Confidence 359999999999999999999999876 5678999999999999999999999762 478999999999887543
Q ss_pred CChHHHHHHhC--------C--hhHHHHHHHHHhhCCceeEE---eceEEEecCCCCCCCCchhhhhhccccccCCCCCc
Q 023226 104 GFYDECLRKYG--------N--ANVWKIFTDLFDYFPLTALV---ESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGP 170 (285)
Q Consensus 104 ~f~~e~~~~~~--------~--~~~~~~~~~~~~~lP~~~~i---~~~~l~vHgGi~~~~~~~~~i~~i~r~~~~~~~~~ 170 (285)
+-....+...+ . ......+.+|+++||+...+ ++++++||||++... . +.. .+ ..
T Consensus 90 ~~~~~~w~~~gg~~~~~l~~~~~~~~~~~~~~l~~LP~~~~~~~~~~~~~~vHAg~p~~~-~-~~~----~~------~~ 157 (218)
T PRK11439 90 SQQMSLWLMNGGDWFIALTDNQQKQAKTLLEKCQRLPFILEVHCRTGKHVIAHADYPADV-Y-EWQ----KD------VD 157 (218)
T ss_pred CCccchhhhCCChhhhhcchhhhHHHHHHHHHHhcCCcEEEeeccCCCEEEEeCCCCCCc-h-hhh----cc------CC
Confidence 22111111111 1 12445667899999998755 356999999984221 1 100 00 01
Q ss_pred cccccccCCCCCCCCccCCCCCccccCHHHHHHHHHHCCCeEEEeeceeeecceEEecCCeeEEEEecCCc
Q 023226 171 MCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMEGYNWGHEQKVVTIFSAPNY 241 (285)
Q Consensus 171 ~~dllWsdp~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iirgH~~~~~G~~~~~~~~~itifSa~~y 241 (285)
..+++|+++.....+. .+ ...+.+.+|.|||+++.-.. .+..+-|.+.+-|
T Consensus 158 ~~~~~w~r~~~~~~~~--~~---------------~~~~~~~vv~GHT~~~~~~~---~~~~i~IDtGav~ 208 (218)
T PRK11439 158 LHQVLWSRSRLGERQK--GQ---------------GITGADHFWFGHTPLRHRVD---IGNLHYIDTGAVF 208 (218)
T ss_pred ccceEEcChhhhhccc--cc---------------cccCCCEEEECCccCCCccc---cCCEEEEECCCCC
Confidence 2457898542211110 00 11245689999999865432 2445666665544
No 28
>cd07422 MPP_ApaH Escherichia coli ApaH and related proteins, metallophosphatase domain. ApaH (also known as symmetrically cleaving Ap4A hydrolase and bis(5'nucleosyl)-tetraphosphatase) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases that hydrolyzes the nucleotide-signaling molecule diadenosine tetraphosphate (Ap(4)A) into two ADP and also hydrolyzes Ap(5)A, Gp(4)G, and other extending compounds. Null mutations in apaH result in high intracellular levels of Ap(4)A which correlate with multiple phenotypes, including a decreased expression of catabolite-repressible genes, a reduction in the expression of flagellar operons, and an increased sensitivity to UV and heat. Ap4A hydrolase is important in responding to heat shock and oxidative stress via regulating the concentration of Ap4A in bacteria. Ap4A hydrolase is also thought to play a role in siderophore production, but the mechanism by which ApaH interacts with siderophore pathwa
Probab=99.93 E-value=3.1e-25 Score=197.41 Aligned_cols=121 Identities=25% Similarity=0.339 Sum_probs=99.8
Q ss_pred EEEEecCCCCHHHHHHHHHhcCCC-CCCcEEEeCCccCCCCChHHHHHHHHhccccCCCcEEEeCCCchhhhhhhhhCCh
Q 023226 28 VTICGDIHGQFHDLAELFRIGGKC-PDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFY 106 (285)
Q Consensus 28 i~vvGDiHG~~~~l~~il~~~~~~-~~~~~vflGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~f~ 106 (285)
++||||||||+++|+++|+++++. +.++++|+||+|||||+|.||++++++++ .++++|+||||.+.++..++..
T Consensus 1 ~yvIGDIHG~~~~L~~LL~~i~~~~~~D~Li~lGDlVdRGp~s~evl~~l~~l~----~~v~~VlGNHD~~ll~~~~g~~ 76 (257)
T cd07422 1 TYAIGDIQGCYDELQRLLEKINFDPAKDRLWLVGDLVNRGPDSLETLRFVKSLG----DSAKTVLGNHDLHLLAVAAGIK 76 (257)
T ss_pred CEEEECCCCCHHHHHHHHHhcCCCCCCCEEEEecCcCCCCcCHHHHHHHHHhcC----CCeEEEcCCchHHHHHHhcCcc
Confidence 489999999999999999999876 57889999999999999999999999986 4699999999999887766643
Q ss_pred H----HHHHHhCChhHHHHHHHHHhhCCceeEEec-eEEEecCCCCCCCCc
Q 023226 107 D----ECLRKYGNANVWKIFTDLFDYFPLTALVES-EIFCLHGGLSPSIET 152 (285)
Q Consensus 107 ~----e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~-~~l~vHgGi~~~~~~ 152 (285)
. +...++......+.+.+|++++|++..+++ ++++||||++|.+..
T Consensus 77 ~~~~~~t~~~~l~~~~~~~~~~wLr~lPl~~~~~~~~~l~vHAGi~p~w~~ 127 (257)
T cd07422 77 KPKKKDTLDDILNAPDRDELLDWLRHQPLLHRDPELGILMVHAGIPPQWSI 127 (257)
T ss_pred ccccHhHHHHHHhccchHHHHHHHHhCCCEEEECCccEEEEccCCCCCCCH
Confidence 1 222233223445678899999999987654 799999999999853
No 29
>cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain. PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all
Probab=99.92 E-value=4.4e-24 Score=184.93 Aligned_cols=170 Identities=20% Similarity=0.273 Sum_probs=117.5
Q ss_pred CcEEEEecCCCCHHHHHHHHHhcCCC-CCCcEEEeCCccCCCCChHHHHHHHHhccccCCCcEEEeCCCchhhhhhhhhC
Q 023226 26 SPVTICGDIHGQFHDLAELFRIGGKC-PDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYG 104 (285)
Q Consensus 26 ~~i~vvGDiHG~~~~l~~il~~~~~~-~~~~~vflGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~ 104 (285)
+|+++||||||++.+|+++++..+.. ..+.++|+||+||||+++.+++.+|.+ .++++++||||.+.+....+
T Consensus 1 ~ri~~isDiHg~~~~l~~~l~~~~~~~~~d~~~~~GD~v~~g~~~~~~~~~l~~------~~~~~v~GNhe~~~~~~~~~ 74 (207)
T cd07424 1 GRDFVVGDIHGHYSLLQKALDAVGFDPARDRLISVGDLIDRGPESLACLELLLE------PWFHAVRGNHEQMAIDALRA 74 (207)
T ss_pred CCEEEEECCCCCHHHHHHHHHHcCCCCCCCEEEEeCCcccCCCCHHHHHHHHhc------CCEEEeECCChHHHHhHhhC
Confidence 47999999999999999999998764 467788999999999999999999876 24899999999998876544
Q ss_pred --ChHHHHHHhCC--------hhHHHHHHHHHhhCCceeEEe---ceEEEecCCCCCCCCchhhhhhccccccCCCCCcc
Q 023226 105 --FYDECLRKYGN--------ANVWKIFTDLFDYFPLTALVE---SEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPM 171 (285)
Q Consensus 105 --f~~e~~~~~~~--------~~~~~~~~~~~~~lP~~~~i~---~~~l~vHgGi~~~~~~~~~i~~i~r~~~~~~~~~~ 171 (285)
...+.+.+.+. ....+...+||++||+...++ .++++||||+++... ..... + +...+...
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lP~~~~i~~~g~~~~~vHag~~~~~~-~~~~~---~--~~~~~~~~ 148 (207)
T cd07424 75 EPLDAVRWLANGGEWFLDLPDEELRRWLALKLEQLPLAIEVETEGGKVGIVHADYPSDDW-SDGVG---A--VTLRPEDI 148 (207)
T ss_pred CCcchhHHHhcCCeehhhcChHHHHHHHHHHHHhCCeEEEEEeCCCEEEEECCCCCcchh-hhhhh---c--cccCcccc
Confidence 22233333332 124566888999999998764 369999999865531 11100 0 11122334
Q ss_pred ccccccCCCCCCCCccCCCCCccccCHHHHHHHHHHCCCeEEEeeceeeecceE
Q 023226 172 CDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMEGYN 225 (285)
Q Consensus 172 ~dllWsdp~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iirgH~~~~~G~~ 225 (285)
.+++|+++........ ..-+.+.||.||++.+..+.
T Consensus 149 ~~~~w~~~~~~~~~~~------------------~~~~~~~iV~GHTh~~~~~~ 184 (207)
T cd07424 149 EELLWSRTRIQKAQTQ------------------PIKGVDAVVHGHTPVKRPLR 184 (207)
T ss_pred eeeeeccchhhhcCcc------------------ccCCCCEEEECCCCCCcceE
Confidence 6788986632111100 01134789999999875443
No 30
>TIGR00668 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical). Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase.
Probab=99.92 E-value=3.7e-25 Score=197.52 Aligned_cols=122 Identities=22% Similarity=0.324 Sum_probs=100.7
Q ss_pred CcEEEEecCCCCHHHHHHHHHhcCCC-CCCcEEEeCCccCCCCChHHHHHHHHhccccCCCcEEEeCCCchhhhhhhhhC
Q 023226 26 SPVTICGDIHGQFHDLAELFRIGGKC-PDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYG 104 (285)
Q Consensus 26 ~~i~vvGDiHG~~~~l~~il~~~~~~-~~~~~vflGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~ 104 (285)
|+++||||||||+++|.++|+++++. ..++++|+||+|||||+|++|+.++.++. +++++|+||||.++++..+|
T Consensus 1 m~~YvIGDIHGc~daL~~LL~~i~f~~~~D~l~~lGDlVdRGP~slevL~~l~~l~----~~~~~VlGNHD~~lL~~~~g 76 (279)
T TIGR00668 1 MATYLIGDLHGCYDELQALLERVEFDPGQDTLWLTGDLVARGPGSLEVLRYVKSLG----DAVRLVLGNHDLHLLAVFAG 76 (279)
T ss_pred CcEEEEEcccCCHHHHHHHHHHhCcCCCCCEEEEeCCccCCCCCHHHHHHHHHhcC----CCeEEEEChhHHHHHHHhcC
Confidence 46899999999999999999999875 46789999999999999999999999985 45889999999999988777
Q ss_pred ChH----HHHHHhCChhHHHHHHHHHhhCCceeEEe-ceEEEecCCCCCCCC
Q 023226 105 FYD----ECLRKYGNANVWKIFTDLFDYFPLTALVE-SEIFCLHGGLSPSIE 151 (285)
Q Consensus 105 f~~----e~~~~~~~~~~~~~~~~~~~~lP~~~~i~-~~~l~vHgGi~~~~~ 151 (285)
+.. +....+......+.+.+|++++|+..... .++++||||++|.++
T Consensus 77 ~~~~~~~d~l~~~l~a~~~~ell~wLr~lPl~i~~~~~~~~lVHAGi~P~w~ 128 (279)
T TIGR00668 77 ISRNKPKDRLDPLLEAPDADELLNWLRRQPLLQHDEEKKLVMAHAGITPQWD 128 (279)
T ss_pred CCccCchHHHHHHHHccCHHHHHHHHHcCCcEEEeCCCCEEEEecCCCCCCc
Confidence 521 22222223456678899999999986543 369999999999985
No 31
>PRK09968 serine/threonine-specific protein phosphatase 2; Provisional
Probab=99.89 E-value=2.4e-22 Score=175.51 Aligned_cols=117 Identities=19% Similarity=0.240 Sum_probs=87.5
Q ss_pred CCcEEEEecCCCCHHHHHHHHHhcCCC-CCCcEEEeCCccCCCCChHHHHHHHHhccccCCCcEEEeCCCchhhhhhhhh
Q 023226 25 KSPVTICGDIHGQFHDLAELFRIGGKC-PDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVY 103 (285)
Q Consensus 25 ~~~i~vvGDiHG~~~~l~~il~~~~~~-~~~~~vflGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~ 103 (285)
.+|++||||||||+++|+++++.+.+. ..++++|+||+|||||+|.+++++|.+ .+++.||||||.+.+....
T Consensus 14 ~~ri~visDiHg~~~~l~~~l~~~~~~~~~d~l~~lGD~vdrG~~~~~~l~~l~~------~~~~~v~GNHE~~~~~~~~ 87 (218)
T PRK09968 14 YRHIWVVGDIHGEYQLLQSRLHQLSFCPETDLLISVGDNIDRGPESLNVLRLLNQ------PWFISVKGNHEAMALDAFE 87 (218)
T ss_pred CCeEEEEEeccCCHHHHHHHHHhcCCCCCCCEEEECCCCcCCCcCHHHHHHHHhh------CCcEEEECchHHHHHHHHh
Confidence 359999999999999999999998754 467888999999999999999999865 2588999999999886542
Q ss_pred CChHHHH--------HHhCC--hhHHHHHHHHHhhCCceeEEe---ceEEEecCCCC
Q 023226 104 GFYDECL--------RKYGN--ANVWKIFTDLFDYFPLTALVE---SEIFCLHGGLS 147 (285)
Q Consensus 104 ~f~~e~~--------~~~~~--~~~~~~~~~~~~~lP~~~~i~---~~~l~vHgGi~ 147 (285)
.-....+ ..... ........+|+++||+...+. +++++||||++
T Consensus 88 ~~~~~~~~~~gg~~~~~l~~~~~~~~~~~~~~L~~LP~~~~~~~~g~~~~~vHAg~p 144 (218)
T PRK09968 88 TGDGNMWLASGGDWFFDLNDSEQQEATDLLLKFHHLPHIIEITNDNIKYVIAHADYP 144 (218)
T ss_pred cCChhHHHHccCHHHhcCCHHHHHHHHHHHHHHhcCCeEEEEeeCCCcEEEEeCCCC
Confidence 1111111 11111 112334466899999987653 46899999983
No 32
>PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this domain centre around the metal chelating residues.; GO: 0016787 hydrolase activity; PDB: 2IAE_C 3DW8_F 3FGA_C 2IE4_C 2NYM_C 2NYL_C 3K7V_C 2NPP_C 2IE3_C 3K7W_C ....
Probab=99.47 E-value=5.2e-13 Score=108.07 Aligned_cols=160 Identities=19% Similarity=0.195 Sum_probs=99.8
Q ss_pred CcEEEEecCCCCHHHH----HHHHHhcCCCCCCcEEEeCCccCCCCChHHHHHHH--HhccccCCCcEEEeCCCchhhhh
Q 023226 26 SPVTICGDIHGQFHDL----AELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLL--VSLKVRYPQRITILRGNHESRQI 99 (285)
Q Consensus 26 ~~i~vvGDiHG~~~~l----~~il~~~~~~~~~~~vflGD~vDrG~~s~evl~~l--~~lk~~~p~~v~~lrGNHE~~~~ 99 (285)
+||+++||+|+..... ..+.+.....+.+.+|++||+++++..+.+..... .......+..+++++||||....
T Consensus 1 ~ri~~isD~H~~~~~~~~~~~~~~~~~~~~~~d~ii~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GNHD~~~~ 80 (200)
T PF00149_consen 1 MRILVISDLHGGYDDDSDAFRKLDEIAAENKPDFIIFLGDLVDGGNPSEEWRAQFWFFIRLLNPKIPVYFILGNHDYYSG 80 (200)
T ss_dssp EEEEEEEBBTTTHHHHCHHHHHHHHHHHHTTTSEEEEESTSSSSSSHHHHHHHHHHHHHHHHHTTTTEEEEE-TTSSHHH
T ss_pred CeEEEEcCCCCCCcchhHHHHHHHHHhccCCCCEEEeeccccccccccccchhhhccchhhhhcccccccccccccccee
Confidence 3799999999999987 34444444456677889999999999887766544 33333445569999999999876
Q ss_pred hhhhCChHHHHH---------------------------------HhCChhHHHHHHHHHhhCCceeEEeceEEEecCCC
Q 023226 100 TQVYGFYDECLR---------------------------------KYGNANVWKIFTDLFDYFPLTALVESEIFCLHGGL 146 (285)
Q Consensus 100 ~~~~~f~~e~~~---------------------------------~~~~~~~~~~~~~~~~~lP~~~~i~~~~l~vHgGi 146 (285)
............ .............+.............++++|.++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~H~p~ 160 (200)
T PF00149_consen 81 NSFYGFYDYQFEDYYGNYNYYYSYFNNKVIFDNDNFWFNSGNNEYPDYGMEAQQEWWLWLLLLLEAKNDDPVIVFTHHPP 160 (200)
T ss_dssp HHHHHHHHHHHSSEEECSSEEECTESSEEEEEETTEEEEEHCCHTHHSEHHHHHHHHHHHHHHHHEEEESEEEEEESSSS
T ss_pred ccccccccccccccccccccccccCcceeeecccccccccccccccccccccchhcccccccccccccccceeEEEecCC
Confidence 543221111110 00001111222222323333333456799999999
Q ss_pred CCCCCchhhhhhccccccCCCCCccccccccCCCCCCCCccCCCCCccccCHHHHHHHHHHCCCeEEEeeceee
Q 023226 147 SPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLV 220 (285)
Q Consensus 147 ~~~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iirgH~~~ 220 (285)
.+........ .....+.+.+..++++.++++++.||+..
T Consensus 161 ~~~~~~~~~~-----------------------------------~~~~~~~~~~~~~~~~~~v~~~~~GH~H~ 199 (200)
T PF00149_consen 161 YSSSSDSSSY-----------------------------------GNESKGREALEELLKKYNVDLVLSGHTHR 199 (200)
T ss_dssp STTSSSTHHH-----------------------------------SSEEEHHHHHHHHHHHTTCSEEEEESSSS
T ss_pred CCcccccccc-----------------------------------chhhccHHHHHHHHhhCCCCEEEeCceec
Confidence 7664321111 11245667889999999999999999874
No 33
>cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain. YfcE is a manganase-dependent metallophosphatase, found in bacteria and archaea, that cleaves bis-p-nitrophenyl phosphate, thymidine 5'-monophosphate-p-nitrophenyl ester, and p-nitrophenyl phosphorylcholine, but is unable to hydrolyze 2',3 ' or 3',5' cyclic nucleic phosphodiesters, and various phosphomonoesters, including p-nitrophenyl phosphate. This family also includes the Bacilus subtilis YsnB and Methanococcus jannaschii MJ0936 proteins. This domain family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid ph
Probab=99.44 E-value=4.9e-12 Score=104.12 Aligned_cols=83 Identities=24% Similarity=0.390 Sum_probs=62.7
Q ss_pred cEEEEecCCCCHHHHHHHHHhcCCCCCCcEEEeCCccCCCCChHHHHHHHHhccccCCCcEEEeCCCchhhhhhhhhCCh
Q 023226 27 PVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFY 106 (285)
Q Consensus 27 ~i~vvGDiHG~~~~l~~il~~~~~~~~~~~vflGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~f~ 106 (285)
++.++||+||+...+.++++.... .+.++++||++++++.+. ++. ...++.++||||....
T Consensus 1 ~i~~isD~H~~~~~~~~~~~~~~~--~d~ii~~GD~~~~~~~~~--------~~~--~~~~~~V~GNhD~~~~------- 61 (155)
T cd00841 1 KIGVISDTHGSLELLEKALELFGD--VDLIIHAGDVLYPGPLNE--------LEL--KAPVIAVRGNCDGEVD------- 61 (155)
T ss_pred CEEEEecCCCCHHHHHHHHHHhcC--CCEEEECCccccccccch--------hhc--CCcEEEEeCCCCCcCC-------
Confidence 588999999999999999998754 678889999999998655 111 2349999999997532
Q ss_pred HHHHHHhCChhHHHHHHHHHhhCCceeEE---eceEEEecCCCC
Q 023226 107 DECLRKYGNANVWKIFTDLFDYFPLTALV---ESEIFCLHGGLS 147 (285)
Q Consensus 107 ~e~~~~~~~~~~~~~~~~~~~~lP~~~~i---~~~~l~vHgGi~ 147 (285)
+..+|....+ +.+++++||...
T Consensus 62 -------------------~~~~p~~~~~~~~g~~i~v~Hg~~~ 86 (155)
T cd00841 62 -------------------FPILPEEAVLEIGGKRIFLTHGHLY 86 (155)
T ss_pred -------------------cccCCceEEEEECCEEEEEECCccc
Confidence 3456655443 237999998863
No 34
>PRK09453 phosphodiesterase; Provisional
Probab=99.38 E-value=1.3e-11 Score=104.75 Aligned_cols=69 Identities=19% Similarity=0.301 Sum_probs=57.0
Q ss_pred CcEEEEecCCCCHHHHHHHHHhcCCCCCCcEEEeCCccCCCCC--------hHHHHHHHHhccccCCCcEEEeCCCchhh
Q 023226 26 SPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYY--------SVETVTLLVSLKVRYPQRITILRGNHESR 97 (285)
Q Consensus 26 ~~i~vvGDiHG~~~~l~~il~~~~~~~~~~~vflGD~vDrG~~--------s~evl~~l~~lk~~~p~~v~~lrGNHE~~ 97 (285)
|++.++||+||++.++.++++.+...+.+.++++||++|+|+. +.+++..|.++. ..+++++||||..
T Consensus 1 mri~viSD~Hg~~~~~~~~l~~~~~~~~d~ii~lGDi~~~~~~~~~~~~~~~~~~~~~l~~~~----~~v~~V~GNhD~~ 76 (182)
T PRK09453 1 MKLMFASDTHGSLPATEKALELFAQSGADWLVHLGDVLYHGPRNPLPEGYAPKKVAELLNAYA----DKIIAVRGNCDSE 76 (182)
T ss_pred CeEEEEEeccCCHHHHHHHHHHHHhcCCCEEEEcccccccCcCCCCccccCHHHHHHHHHhcC----CceEEEccCCcch
Confidence 5899999999999999999988766667889999999999873 467777776653 3499999999975
Q ss_pred h
Q 023226 98 Q 98 (285)
Q Consensus 98 ~ 98 (285)
.
T Consensus 77 ~ 77 (182)
T PRK09453 77 V 77 (182)
T ss_pred h
Confidence 3
No 35
>TIGR00040 yfcE phosphoesterase, MJ0936 family. Members of this largely uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11, and a family of uncharacterized archaeal putative phosphoesterases described by TIGR00024. In this family, the His residue in GNHD portion of the motif is not conserved. The member MJ0936, one of two from Methanococcus jannaschii, was shown (PubMed:15128743) to act on model phosphodiesterase substrates; a divalent cation was required.
Probab=99.35 E-value=2.7e-11 Score=100.29 Aligned_cols=63 Identities=16% Similarity=0.210 Sum_probs=50.2
Q ss_pred CcEEEEecCCCCHHHHHHHHHhcCCC-CCCcEEEeCCccCCCCChHHHHHHHHhccccCCCcEEEeCCCchhh
Q 023226 26 SPVTICGDIHGQFHDLAELFRIGGKC-PDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESR 97 (285)
Q Consensus 26 ~~i~vvGDiHG~~~~l~~il~~~~~~-~~~~~vflGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~ 97 (285)
+++.++||+||+..++..+++..... ..+.++++||++ +.+++..+.++.. .++.++||||..
T Consensus 1 m~i~viSD~H~~~~~~~~~~~~~~~~~~~d~ii~~GD~~-----~~~~~~~l~~~~~----~~~~V~GN~D~~ 64 (158)
T TIGR00040 1 MKILVISDTHGPLRATELPVELFNLESNVDLVIHAGDLT-----SPFVLKEFEDLAA----KVIAVRGNNDGE 64 (158)
T ss_pred CEEEEEecccCCcchhHhHHHHHhhccCCCEEEEcCCCC-----CHHHHHHHHHhCC----ceEEEccCCCch
Confidence 57999999999998887777766554 567888999998 4678877766542 389999999973
No 36
>PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily [].; PDB: 2GJU_A 1Z2W_A 1Z2X_B 3PSO_B 3PSN_B 1W24_A 2R17_B 3QFN_B 3QFO_A 3QFM_A ....
Probab=99.30 E-value=6.6e-11 Score=96.74 Aligned_cols=125 Identities=19% Similarity=0.316 Sum_probs=81.2
Q ss_pred CcEEEEecCCCCHHHHHHHHHhcCCCCCCcEEEeCCccCCCCChHHHHHHHHhccccCCCcEEEeCCCchhhhhhhhhCC
Q 023226 26 SPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGF 105 (285)
Q Consensus 26 ~~i~vvGDiHG~~~~l~~il~~~~~~~~~~~vflGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~f 105 (285)
||+.++||+|++...+.++++.+ ...+.++++||+++ ..++++.+... .++.++||||..........
T Consensus 1 Mki~~~sD~H~~~~~~~~~~~~~--~~~d~vi~~GDi~~----~~~~~~~~~~~------~~~~v~GNHD~~~~~~~~~~ 68 (156)
T PF12850_consen 1 MKIAVISDLHGNLDALEAVLEYI--NEPDFVIILGDIFD----PEEVLELLRDI------PVYVVRGNHDNWAFPNENDE 68 (156)
T ss_dssp EEEEEEE--TTTHHHHHHHHHHH--TTESEEEEES-SCS----HHHHHHHHHHH------EEEEE--CCHSTHHHSEECT
T ss_pred CEEEEEeCCCCChhHHHHHHHHh--cCCCEEEECCCchh----HHHHHHHHhcC------CEEEEeCCcccccchhhhhc
Confidence 58999999999999999999988 34677888999999 37778777665 39999999996543322110
Q ss_pred hHHHHHHhCChhHHHHHHHHHhhCCceeEEeceEEEecCCCCCCCCchhhhhhccccccCCCCCccccccccCCCCCCCC
Q 023226 106 YDECLRKYGNANVWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGW 185 (285)
Q Consensus 106 ~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~l~vHgGi~~~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~ 185 (285)
.. +....... .-..+++++||.+...
T Consensus 69 -----------~~------~~~~~~~~-~~~~~i~~~H~~~~~~------------------------------------ 94 (156)
T PF12850_consen 69 -----------EY------LLDALRLT-IDGFKILLSHGHPYDV------------------------------------ 94 (156)
T ss_dssp -----------CS------SHSEEEEE-ETTEEEEEESSTSSSS------------------------------------
T ss_pred -----------cc------cccceeee-ecCCeEEEECCCCccc------------------------------------
Confidence 00 11111111 1145799999976431
Q ss_pred ccCCCCCccccCHHHHHHHHHHCCCeEEEeeceeeecceE
Q 023226 186 GISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMEGYN 225 (285)
Q Consensus 186 ~~~~rg~~~~fg~~~~~~fl~~~~~~~iirgH~~~~~G~~ 225 (285)
..+.+.+.+.+...++++++.||...+.-.+
T Consensus 95 ---------~~~~~~~~~~~~~~~~~~~~~GH~H~~~~~~ 125 (156)
T PF12850_consen 95 ---------QWDPAELREILSRENVDLVLHGHTHRPQVFK 125 (156)
T ss_dssp ---------TTTHHHHHHHHHHTTSSEEEESSSSSEEEEE
T ss_pred ---------ccChhhhhhhhcccCCCEEEcCCcccceEEE
Confidence 1233456667778999999999998754433
No 37
>cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain. 239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzyme
Probab=99.25 E-value=4.8e-11 Score=96.21 Aligned_cols=118 Identities=20% Similarity=0.199 Sum_probs=80.7
Q ss_pred cEEEEecCCCCHHHHHHHHHhcCCCCCCcEEEeCCccCCCCChH--HHHHHHHhccccCCCcEEEeCCCchhhhhhhhhC
Q 023226 27 PVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSV--ETVTLLVSLKVRYPQRITILRGNHESRQITQVYG 104 (285)
Q Consensus 27 ~i~vvGDiHG~~~~l~~il~~~~~~~~~~~vflGD~vDrG~~s~--evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~ 104 (285)
++.++||+||++. .....+.+.++++||+++++..+. +.+.++.+++. | .+++++||||....
T Consensus 1 ~i~~isD~H~~~~-------~~~~~~~D~vi~~GD~~~~~~~~~~~~~~~~l~~~~~--~-~~~~v~GNHD~~~~----- 65 (135)
T cd07379 1 RFVCISDTHSRHR-------TISIPDGDVLIHAGDLTERGTLEELQKFLDWLKSLPH--P-HKIVIAGNHDLTLD----- 65 (135)
T ss_pred CEEEEeCCCCCCC-------cCcCCCCCEEEECCCCCCCCCHHHHHHHHHHHHhCCC--C-eEEEEECCCCCcCC-----
Confidence 5899999999987 122345677888999999886532 35666665532 2 36789999995411
Q ss_pred ChHHHHHHhCChhHHHHHHHHHhhCCceeEEeceEEEecCCCCCCCCchhhhhhccccccCCCCCccccccccCCCCCCC
Q 023226 105 FYDECLRKYGNANVWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCG 184 (285)
Q Consensus 105 f~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~l~vHgGi~~~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~ 184 (285)
.-+.+++++||.+.+... ..+.
T Consensus 66 -----------------------------~~~~~ilv~H~~p~~~~~----------------------~~~~------- 87 (135)
T cd07379 66 -----------------------------PEDTDILVTHGPPYGHLD----------------------LVSS------- 87 (135)
T ss_pred -----------------------------CCCCEEEEECCCCCcCcc----------------------cccc-------
Confidence 114579999996532110 0000
Q ss_pred CccCCCCCccccCHHHHHHHHHHCCCeEEEeeceeeecceE
Q 023226 185 WGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMEGYN 225 (285)
Q Consensus 185 ~~~~~rg~~~~fg~~~~~~fl~~~~~~~iirgH~~~~~G~~ 225 (285)
....|...+.+++++.+.++++.||+..+.|++
T Consensus 88 --------~~~~g~~~~~~~~~~~~~~~~i~GH~H~~~~~~ 120 (135)
T cd07379 88 --------GQRVGCEELLNRVQRVRPKLHVFGHIHEGYGAE 120 (135)
T ss_pred --------CcccCCHHHHHHHHHHCCcEEEEcCcCCcCcee
Confidence 013566788888899999999999999988876
No 38
>cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain. DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy
Probab=99.20 E-value=2.5e-10 Score=100.46 Aligned_cols=157 Identities=20% Similarity=0.272 Sum_probs=98.7
Q ss_pred cEEEEecCCCCHHHHH-HHHHhcCCCCCCcEEEeCCccCCCCChHHHHHHHHhccccCCCcEEEeCCCchhhhhh----h
Q 023226 27 PVTICGDIHGQFHDLA-ELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQIT----Q 101 (285)
Q Consensus 27 ~i~vvGDiHG~~~~l~-~il~~~~~~~~~~~vflGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~----~ 101 (285)
+|+++|||||++.... +.++. ...+.++++||+++ .+.+++..|.++. + .++.++||||.+... .
T Consensus 2 rIa~isDiHg~~~~~~~~~l~~---~~pD~Vl~~GDi~~---~~~~~~~~l~~l~--~--p~~~V~GNHD~~~~~~~~~k 71 (238)
T cd07397 2 RIAIVGDVHGQWDLEDIKALHL---LQPDLVLFVGDFGN---ESVQLVRAISSLP--L--PKAVILGNHDAWYDATFRKK 71 (238)
T ss_pred EEEEEecCCCCchHHHHHHHhc---cCCCEEEECCCCCc---ChHHHHHHHHhCC--C--CeEEEcCCCcccccccccch
Confidence 6899999999987643 23332 33478889999986 4577888777663 3 389999999986532 0
Q ss_pred ---------h-------h----------------CC---------hHHHHHHhCChhHHHHHHHHHhhCCceeEEeceEE
Q 023226 102 ---------V-------Y----------------GF---------YDECLRKYGNANVWKIFTDLFDYFPLTALVESEIF 140 (285)
Q Consensus 102 ---------~-------~----------------~f---------~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~l 140 (285)
. + +| ..++...|+.....+.+...++.++.+......+|
T Consensus 72 ~~~l~~~L~~lg~~~l~~~~~~~~~~~~~vvG~R~~~~~g~~~~~~~~vr~~fgi~s~~eA~~~ive~~~~~~~~~~~Vl 151 (238)
T cd07397 72 GDRVQEQLELLGDLHCGWGRLDFPPLPLSVVGGRPFSAGGGFWLSKKAVKAVYGVISLEESAQRIIAAAKKAPPDLPLIL 151 (238)
T ss_pred HHHHHHHHHHhCCcEEeecccccCCCCeEEEeeCCccCCCccccCHHHHHHHhCCCCHHHHHHHHHHHhhhcCCCCCeEE
Confidence 0 0 00 12456667666778888888888864433345799
Q ss_pred EecCCCCCCCCchhhhhhccccccCCCCCccccccccCCCCCCCCccCCCCCccccCHHHHHHHHHHCC----CeEEEee
Q 023226 141 CLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNN----LKLIARA 216 (285)
Q Consensus 141 ~vHgGi~~~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~----~~~iirg 216 (285)
+.|+++.-.....+++ |--=|..+ +.-+|...+.+.++... .++++-|
T Consensus 152 iaH~~~~G~g~~~~~~---------------cg~d~~~~-------------~~~~G~~~l~~ai~~~~~~~~~~l~~fG 203 (238)
T cd07397 152 LAHNGPSGLGSDAEDP---------------CGRDWKPP-------------GGDWGDPDLALAISQIQQGRQVPLVVFG 203 (238)
T ss_pred EeCcCCcCCCcccccc---------------cccccCCc-------------CCCCCCHHHHHHHHHHhccCCCCEEEeC
Confidence 9999985442111110 11112211 12356666655555443 7999999
Q ss_pred ceeee
Q 023226 217 HQLVM 221 (285)
Q Consensus 217 H~~~~ 221 (285)
|-...
T Consensus 204 H~H~~ 208 (238)
T cd07397 204 HMHHR 208 (238)
T ss_pred CccCc
Confidence 98764
No 39
>cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain. This family includes bacterial proteins related to Tt1561 (also known as Aq1956 in Aquifex aeolicus), an uncharacterized Thermus thermophilus protein. The conserved domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets,
Probab=99.20 E-value=2.5e-09 Score=93.65 Aligned_cols=72 Identities=11% Similarity=0.158 Sum_probs=58.2
Q ss_pred CCcEEEEecCCCCHHHHHHHHHhcCCCCCCcEEEeCCccCCCCChHHHHHHHHhccccCCCcEEEeCCCchhh
Q 023226 25 KSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESR 97 (285)
Q Consensus 25 ~~~i~vvGDiHG~~~~l~~il~~~~~~~~~~~vflGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~ 97 (285)
.+++.++||+||++..+.++++.......+.+|++||++++|+..-++..++..+.... ..++.++||||..
T Consensus 4 ~~kIl~iSDiHgn~~~le~l~~~~~~~~~D~vv~~GDl~~~g~~~~~~~~~l~~l~~l~-~pv~~V~GNhD~~ 75 (224)
T cd07388 4 VRYVLATSNPKGDLEALEKLVGLAPETGADAIVLIGNLLPKAAKSEDYAAFFRILGEAH-LPTFYVPGPQDAP 75 (224)
T ss_pred eeEEEEEEecCCCHHHHHHHHHHHhhcCCCEEEECCCCCCCCCCHHHHHHHHHHHHhcC-CceEEEcCCCChH
Confidence 35799999999999999999987755567889999999999976767767766664322 2389999999975
No 40
>cd07394 MPP_Vps29 Homo sapiens Vps29 and related proteins, metallophosphatase domain. Vps29 (vacuolar sorting protein 29), also known as vacuolar membrane protein Pep11, is a subunit of the retromer complex which is responsible for the retrieval of mannose-6-phosphate receptors (MPRs) from the endosomes for retrograde transport back to the Golgi. Vps29 has a phosphoesterase fold that acts as a protein interaction scaffold for retromer complex assembly as well as a phosphatase with specificity for the cytoplasmic tail of the MPR. The retromer includes the following 5 subunits: Vps35, Vps26, Vps29, and a dimer of the sorting nexins Vps5 (Snx1), and Vps17 (Snx2). Vps29 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily incl
Probab=99.12 E-value=5.1e-09 Score=88.64 Aligned_cols=126 Identities=21% Similarity=0.372 Sum_probs=81.6
Q ss_pred cEEEEecCC-CCHH-----HHHHHHHhcCCCCCCcEEEeCCccCCCCChHHHHHHHHhccccCCCcEEEeCCCchhhhhh
Q 023226 27 PVTICGDIH-GQFH-----DLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQIT 100 (285)
Q Consensus 27 ~i~vvGDiH-G~~~-----~l~~il~~~~~~~~~~~vflGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~ 100 (285)
+|.||||+| |.-. .+.++++. .+.+.++.+||+++ .+++.++..++ ..++.++||||...
T Consensus 1 ~i~viSDtHl~~~~~~~~~~~~~~~~~---~~~d~iih~GDi~~-----~~~~~~l~~~~----~~~~~V~GN~D~~~-- 66 (178)
T cd07394 1 LVLVIGDLHIPHRASDLPAKFKKLLVP---GKIQHVLCTGNLCS-----KETYDYLKTIA----PDVHIVRGDFDENL-- 66 (178)
T ss_pred CEEEEEecCCCCCchhhHHHHHHHhcc---CCCCEEEECCCCCC-----HHHHHHHHhhC----CceEEEECCCCccc--
Confidence 478999999 6533 24444433 44677889999986 67888877663 24899999999631
Q ss_pred hhhCChHHHHHHhCChhHHHHHHHHHhhCCceeEE---eceEEEecCCCCCCCCchhhhhhccccccCCCCCcccccccc
Q 023226 101 QVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALV---ESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWS 177 (285)
Q Consensus 101 ~~~~f~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i---~~~~l~vHgGi~~~~~~~~~i~~i~r~~~~~~~~~~~dllWs 177 (285)
.+|....+ +.+++++||..-.. |.
T Consensus 67 ---------------------------~lp~~~~~~~~g~~i~l~HG~~~~~--------------------------~~ 93 (178)
T cd07394 67 ---------------------------NYPETKVITVGQFKIGLIHGHQVVP--------------------------WG 93 (178)
T ss_pred ---------------------------cCCCcEEEEECCEEEEEEECCcCCC--------------------------CC
Confidence 35554443 34899999853100 10
Q ss_pred CCCCCCCCccCCCCCccccCHHHHHHHHHHCCCeEEEeeceeeecceEEecCCeeEEEEecCCccc
Q 023226 178 DPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMEGYNWGHEQKVVTIFSAPNYCY 243 (285)
Q Consensus 178 dp~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iirgH~~~~~G~~~~~~~~~itifSa~~y~~ 243 (285)
..+.+.++.+..+.++++.||+..+.-. ..++ +++.+|+-.+
T Consensus 94 -------------------~~~~~~~~~~~~~~dvii~GHTH~p~~~--~~~g---~~viNPGSv~ 135 (178)
T cd07394 94 -------------------DPDSLAALQRQLDVDILISGHTHKFEAF--EHEG---KFFINPGSAT 135 (178)
T ss_pred -------------------CHHHHHHHHHhcCCCEEEECCCCcceEE--EECC---EEEEECCCCC
Confidence 1234455566788899999999986432 2234 3566666554
No 41
>COG0639 ApaH Diadenosine tetraphosphatase and related serine/threonine protein phosphatases [Signal transduction mechanisms]
Probab=99.02 E-value=8.6e-10 Score=88.55 Aligned_cols=143 Identities=46% Similarity=0.777 Sum_probs=114.9
Q ss_pred hhhhhCChHHHHHHhCChhHHHH---HHHHHhhCCceeEEec-eEEEecCCCCCCC-Cchhhhhhccccc--cCCCCCcc
Q 023226 99 ITQVYGFYDECLRKYGNANVWKI---FTDLFDYFPLTALVES-EIFCLHGGLSPSI-ETLDNIRNFDRVQ--EVPHEGPM 171 (285)
Q Consensus 99 ~~~~~~f~~e~~~~~~~~~~~~~---~~~~~~~lP~~~~i~~-~~l~vHgGi~~~~-~~~~~i~~i~r~~--~~~~~~~~ 171 (285)
+...+++..++...++....|.. ..++|+.+|+.+++.+ .++|.|+++++.. ..+++++.+.|.. .+...+..
T Consensus 3 l~~~~~~~~~~~~~~~~~~~w~~~~g~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~g~~ 82 (155)
T COG0639 3 LTALYGFYDEKLRKYGEELEWLRAAGGLETFDSLPLAAVAEGGKLLCHHGGLSPGLDRLLDIIEVLDRLRACEVPHAGHT 82 (155)
T ss_pred hhhhhchhHHhhhhcCCceeeeeccchhhHHHhhhHHHHhcCCceeeecCCCCcchhhhHHHHHHHhhhhcccCCCcccc
Confidence 44556777776666654334555 8999999999998877 8999999999975 6677887777765 66677777
Q ss_pred ccccccCCCC--CCCCccCCCCCccccCHHHHHHHHHHCCCeEEEeeceeeecceEEecCCeeEEEEecCCcc
Q 023226 172 CDLLWSDPDD--RCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMEGYNWGHEQKVVTIFSAPNYC 242 (285)
Q Consensus 172 ~dllWsdp~~--~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iirgH~~~~~G~~~~~~~~~itifSa~~y~ 242 (285)
.+.+|+++.. ...|..+++|.+..+ .+.+..|......+.+.++|+.+..++...+.+..+|.|++++|+
T Consensus 83 ~~~~~~~~~~~~~~~w~~~~~g~~~~~-~~~~~~f~~~~~~~~~~~~~~~~~~d~~~~~~~~~lt~~~~~~~~ 154 (155)
T COG0639 83 HDLLWSDPDGGDRRIWNPGPRGVPRDG-GDVTAVFGIVHTPKLIERAHVLYDIDTGAVFGGGLLTAFSAPNYC 154 (155)
T ss_pred ccccCCCCCCCcccccccCCCCCCccc-cchhhHHhhhcccceEEEEeEEEecCceEEeCCCeeeEEeccccc
Confidence 7789999875 688999999988666 778888887777777999999999998887776899999999986
No 42
>cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain. PAE1087 is an uncharacterized Pyrobaculum aerophilum protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordina
Probab=98.93 E-value=2.9e-08 Score=83.54 Aligned_cols=65 Identities=20% Similarity=0.306 Sum_probs=47.0
Q ss_pred EEEEecCCCCHHHHHHHHHhcCCCCCCcEEEeCCccCCCCC-hHHHHHHHHhccccCCCcEEEeCCCchhhh
Q 023226 28 VTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYY-SVETVTLLVSLKVRYPQRITILRGNHESRQ 98 (285)
Q Consensus 28 i~vvGDiHG~~~~l~~il~~~~~~~~~~~vflGD~vDrG~~-s~evl~~l~~lk~~~p~~v~~lrGNHE~~~ 98 (285)
|.++||+||++..+.. ......+.+.+|++||++++|.. ..+.+..+.+++ ..++.++||||...
T Consensus 1 i~~~sD~H~~~~~~~~--~~~~~~~~D~vv~~GDl~~~~~~~~~~~~~~l~~~~----~p~~~v~GNHD~~~ 66 (188)
T cd07392 1 ILAISDIHGDVEKLEA--IILKAEEADAVIVAGDITNFGGKEAAVEINLLLAIG----VPVLAVPGNCDTPE 66 (188)
T ss_pred CEEEEecCCCHHHHHH--HHhhccCCCEEEECCCccCcCCHHHHHHHHHHHhcC----CCEEEEcCCCCCHH
Confidence 5789999999998876 33333456778899999999875 333444444432 33999999999754
No 43
>cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain. Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive me
Probab=98.89 E-value=1.5e-08 Score=79.06 Aligned_cols=117 Identities=21% Similarity=0.324 Sum_probs=81.3
Q ss_pred EEEecCCCCHHHHHHHH--HhcCCCCCCcEEEeCCccCCCCChHHHHHHHHhccccCCCcEEEeCCCchhhhhhhhhCCh
Q 023226 29 TICGDIHGQFHDLAELF--RIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFY 106 (285)
Q Consensus 29 ~vvGDiHG~~~~l~~il--~~~~~~~~~~~vflGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~f~ 106 (285)
+++||+|+......... ........+.+|++||+++.+....+...............++++.||||
T Consensus 1 ~~~gD~h~~~~~~~~~~~~~~~~~~~~~~vi~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GNHD----------- 69 (131)
T cd00838 1 AVISDIHGNLEALEAVLEAALAAAEKPDFVLVLGDLVGDGPDPEEVLAAALALLLLLGIPVYVVPGNHD----------- 69 (131)
T ss_pred CeeecccCCccchHHHHHHHHhcccCCCEEEECCcccCCCCCchHHHHHHHHHhhcCCCCEEEeCCCce-----------
Confidence 37899999999887765 33334455778899999999988776554422222223345999999999
Q ss_pred HHHHHHhCChhHHHHHHHHHhhCCceeEEeceEEEecCCCCCCCCchhhhhhccccccCCCCCccccccccCCCCCCCCc
Q 023226 107 DECLRKYGNANVWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWG 186 (285)
Q Consensus 107 ~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~l~vHgGi~~~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~ 186 (285)
++++|.++.+...... +..
T Consensus 70 --------------------------------i~~~H~~~~~~~~~~~---------------------~~~-------- 88 (131)
T cd00838 70 --------------------------------ILLTHGPPYDPLDELS---------------------PDE-------- 88 (131)
T ss_pred --------------------------------EEEeccCCCCCchhhc---------------------ccc--------
Confidence 8999998855432110 000
Q ss_pred cCCCCCccccCHHHHHHHHHHCCCeEEEeeceeeecceE
Q 023226 187 ISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMEGYN 225 (285)
Q Consensus 187 ~~~rg~~~~fg~~~~~~fl~~~~~~~iirgH~~~~~G~~ 225 (285)
..............+.+.+|.||+.....+.
T Consensus 89 --------~~~~~~~~~~~~~~~~~~~~~GH~H~~~~~~ 119 (131)
T cd00838 89 --------DPGSEALLELLEKYGVDLVLSGHTHVYERRE 119 (131)
T ss_pred --------hhhHHHHHHHHHHhCCCEEEeCCeecccccc
Confidence 0145677788888999999999999866554
No 44
>COG2129 Predicted phosphoesterases, related to the Icc protein [General function prediction only]
Probab=98.85 E-value=2.7e-07 Score=79.65 Aligned_cols=209 Identities=18% Similarity=0.160 Sum_probs=120.4
Q ss_pred CCcEEEEecCCCCHHHHHHHHHhcCCCCCCcEEEeCCcc--CCCCChHHH----HHHHHhccccCCCcEEEeCCCchhhh
Q 023226 25 KSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYV--DRGYYSVET----VTLLVSLKVRYPQRITILRGNHESRQ 98 (285)
Q Consensus 25 ~~~i~vvGDiHG~~~~l~~il~~~~~~~~~~~vflGD~v--DrG~~s~ev----l~~l~~lk~~~p~~v~~lrGNHE~~~ 98 (285)
.+++..+.|+||..+.+.+++........+-+++.||+. +.|+.-... ++.+..+. ..++.++||.|...
T Consensus 3 ~mkil~vtDlHg~~~~~~k~~~~~~~~~~D~lviaGDlt~~~~~~~~~~~~~~~~e~l~~~~----~~v~avpGNcD~~~ 78 (226)
T COG2129 3 KMKILAVTDLHGSEDSLKKLLNAAADIRADLLVIAGDLTYFHFGPKEVAEELNKLEALKELG----IPVLAVPGNCDPPE 78 (226)
T ss_pred cceEEEEeccccchHHHHHHHHHHhhccCCEEEEecceehhhcCchHHHHhhhHHHHHHhcC----CeEEEEcCCCChHH
Confidence 578999999999999999999988877778888999999 888753322 23344333 34999999999765
Q ss_pred hhhhhCChHHHHHHhCChhHHHHHHHHHhhCCceeEEeceEEEecCCCCCCCC------chhhhhhcc-ccccCCCCCcc
Q 023226 99 ITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIE------TLDNIRNFD-RVQEVPHEGPM 171 (285)
Q Consensus 99 ~~~~~~f~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~l~vHgGi~~~~~------~~~~i~~i~-r~~~~~~~~~~ 171 (285)
+-... ...+. .+ .+-...+++--+|-=||..|..- +.++|...- +..+...+..-
T Consensus 79 v~~~l-------~~~~~-~v----------~~~v~~i~~~~~~G~Ggsn~tp~nt~~e~~E~~I~s~l~~~v~~~~~~~~ 140 (226)
T COG2129 79 VIDVL-------KNAGV-NV----------HGRVVEIGGYGFVGFGGSNPTPFNTPREFSEDEIYSKLKSLVKKADNPVN 140 (226)
T ss_pred HHHHH-------Hhccc-cc----------ccceEEecCcEEEEecccCCCCCCCccccCHHHHHHHHHHHHhcccCcce
Confidence 43211 11100 00 00111222223444444433211 122221111 10000000000
Q ss_pred ccccccCCCCCCCCccCCCCCccccCHHHHHHHHHHCCCeEEEeeceeeecceEEecCCeeEEEEecCCccccCCCcEEE
Q 023226 172 CDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMEGYNWGHEQKVVTIFSAPNYCYRCGNMASI 251 (285)
Q Consensus 172 ~dllWsdp~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iirgH~~~~~G~~~~~~~~~itifSa~~y~~~~~n~~a~ 251 (285)
-=++-+-|-. .....+.| -.--|..+++++.++.+-.+.+.||-....|+....+ ||+.+|+-. ...+.|+
T Consensus 141 Il~~HaPP~g--t~~d~~~g-~~hvGS~~vr~~ieefqP~l~i~GHIHEs~G~d~iG~----TivVNPG~~--~~g~yA~ 211 (226)
T COG2129 141 ILLTHAPPYG--TLLDTPSG-YVHVGSKAVRKLIEEFQPLLGLHGHIHESRGIDKIGN----TIVVNPGPL--GEGRYAL 211 (226)
T ss_pred EEEecCCCCC--ccccCCCC-ccccchHHHHHHHHHhCCceEEEeeecccccccccCC----eEEECCCCc--cCceEEE
Confidence 0001111110 00011222 0246899999999999999999999999899876544 899999864 3467899
Q ss_pred EEEcCCCCeEEEEE
Q 023226 252 LEVDDCKGHTFIQF 265 (285)
Q Consensus 252 l~i~~~~~~~~~~~ 265 (285)
+.++++ .++..+|
T Consensus 212 i~l~~~-~Vk~~~~ 224 (226)
T COG2129 212 IELEKE-VVKLEQF 224 (226)
T ss_pred EEecCc-EEEEEEe
Confidence 999876 5665555
No 45
>cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain. MS158 is an uncharacterized Microscilla protein with a metallophosphatase domain. Microscilla proteins MS152, and MS153 are also included in this family. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is t
Probab=98.82 E-value=8.1e-09 Score=85.93 Aligned_cols=67 Identities=21% Similarity=0.127 Sum_probs=46.5
Q ss_pred EEEEecCCCCHHHHHHHHH-hcCCCCCCcEEEeCCccCCCCChHHHHHHHHhccccCCCcEEEeCCCchhh
Q 023226 28 VTICGDIHGQFHDLAELFR-IGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESR 97 (285)
Q Consensus 28 i~vvGDiHG~~~~l~~il~-~~~~~~~~~~vflGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~ 97 (285)
+.++||+|++...+...+. .......+.++++||+++++.....+. ++...+ .+..+++++||||..
T Consensus 1 ~~~iSDlH~~~~~~~~~~~~~~~~~~~d~li~~GDi~~~~~~~~~~~-~~~~~~--~~~~v~~v~GNHD~~ 68 (166)
T cd07404 1 IQYLSDLHLEFEDNLADLLNFPIAPDADILVLAGDIGYLTDAPRFAP-LLLALK--GFEPVIYVPGNHEFY 68 (166)
T ss_pred CceEccccccCccccccccccCCCCCCCEEEECCCCCCCcchHHHHH-HHHhhc--CCccEEEeCCCcceE
Confidence 4689999999887766552 233345567888999999887655443 222222 234599999999985
No 46
>cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain. YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for
Probab=98.81 E-value=1.3e-07 Score=82.31 Aligned_cols=192 Identities=17% Similarity=0.169 Sum_probs=104.5
Q ss_pred cEEEEecCCCC----HHHH----HHHHHhcCCCCCCcEEEeCCccCCCCChH---HHHHHHHhcc-ccCCCcEEEeCCCc
Q 023226 27 PVTICGDIHGQ----FHDL----AELFRIGGKCPDTNYLFMGDYVDRGYYSV---ETVTLLVSLK-VRYPQRITILRGNH 94 (285)
Q Consensus 27 ~i~vvGDiHG~----~~~l----~~il~~~~~~~~~~~vflGD~vDrG~~s~---evl~~l~~lk-~~~p~~v~~lrGNH 94 (285)
+++++||+|-- ...+ ..+++.......+-+|++||+++.+.... .....+..|+ ...| ++.++|||
T Consensus 2 ~~~~~~D~q~~~~~~~~~~~~~~~~i~~~~~~~~~d~iv~~GDl~~~~~~~~~~~~~~~~~~~l~~~~~p--~~~~~GNH 79 (214)
T cd07399 2 TLAVLPDTQYYTESYPEVFDAQTDWIVDNAEALNIAFVLHLGDIVDDGDNDAEWEAADKAFARLDKAGIP--YSVLAGNH 79 (214)
T ss_pred EEEEecCCCcCCcCCHHHHHHHHHHHHHHHHHcCCCEEEECCCccCCCCCHHHHHHHHHHHHHHHHcCCc--EEEECCCC
Confidence 58899999952 2233 33344443334567889999999988432 2233344443 1233 88999999
Q ss_pred hhhhhhhhhCChHHHHHHhCChhHHHHHHHHHhhCCceeEEeceEEEecCCCCCCCCchhhhhhccccccCCCCCccccc
Q 023226 95 ESRQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDL 174 (285)
Q Consensus 95 E~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~l~vHgGi~~~~~~~~~i~~i~r~~~~~~~~~~~dl 174 (285)
|... ...+. ...+-.+.+.+.++.-|- ..-++++|--+.+..... ...
T Consensus 80 D~~~-~ld~~---------~~~~ql~WL~~~L~~~~~----~~~iv~~H~p~~~~~~~~------------------~~~ 127 (214)
T cd07399 80 DLVL-ALEFG---------PRDEVLQWANEVLKKHPD----RPAILTTHAYLNCDDSRP------------------DSI 127 (214)
T ss_pred cchh-hCCCC---------CCHHHHHHHHHHHHHCCC----CCEEEEecccccCCCCcC------------------ccc
Confidence 9421 11111 013344556666665442 134888997654321100 001
Q ss_pred cccCCCCCCCCccCCCCCccccCHHHHHHHHHHC-CCeEEEeeceeeecceEEe-----cCCeeEEEEecCCccccCCCc
Q 023226 175 LWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTN-NLKLIARAHQLVMEGYNWG-----HEQKVVTIFSAPNYCYRCGNM 248 (285)
Q Consensus 175 lWsdp~~~~~~~~~~rg~~~~fg~~~~~~fl~~~-~~~~iirgH~~~~~G~~~~-----~~~~~itifSa~~y~~~~~n~ 248 (285)
.|.. ....+.+.+.+.++++ +++.++.||.... +.... .++.+..+.+........+|.
T Consensus 128 ~~~~--------------~~~~~~~~~~~ll~~~~~V~~v~~GH~H~~-~~~~~~~~~~~g~~v~~~~~~~q~~~~~g~~ 192 (214)
T cd07399 128 DYDS--------------DVNDGQQIWDKLVKKNDNVFMVLSGHVHGA-GRTTLVSVGDAGRTVHQMLADYQGEPNGGNG 192 (214)
T ss_pred cccc--------------ccccHHHHHHHHHhCCCCEEEEEccccCCC-ceEEEcccCCCCCEeeEEeecccCCCCCCcc
Confidence 1110 1124456677888887 8999999998753 33222 134455554443221111222
Q ss_pred E-EEEEEcCC-CCeEEEEEec
Q 023226 249 A-SILEVDDC-KGHTFIQFEP 267 (285)
Q Consensus 249 ~-a~l~i~~~-~~~~~~~~~~ 267 (285)
. .++.+++. ..+.+.+|.|
T Consensus 193 ~~r~~~f~~~~~~i~~~tysp 213 (214)
T cd07399 193 FLRLLEFDPDNNKIDVRTYSP 213 (214)
T ss_pred eEEEEEEecCCCEEEEEeCCC
Confidence 1 57777765 5788888866
No 47
>PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional
Probab=98.78 E-value=8.4e-08 Score=84.94 Aligned_cols=207 Identities=14% Similarity=0.152 Sum_probs=106.6
Q ss_pred CcEEEEecCCCCH------HHHHHHHHhcCCCCCCcEEEeCCccCC--C-----CChHHHHHHHHhccccCCCcEEEeCC
Q 023226 26 SPVTICGDIHGQF------HDLAELFRIGGKCPDTNYLFMGDYVDR--G-----YYSVETVTLLVSLKVRYPQRITILRG 92 (285)
Q Consensus 26 ~~i~vvGDiHG~~------~~l~~il~~~~~~~~~~~vflGD~vDr--G-----~~s~evl~~l~~lk~~~p~~v~~lrG 92 (285)
|++++++|+|... ..+.+.++.. ....+.++++||++|. | +...+++.+|.+++.. +..+++++|
T Consensus 1 M~i~~iSDlHl~~~~~~~~~~~~~~l~~~-~~~~d~l~i~GDl~d~~~g~~~~~~~~~~~~~~l~~l~~~-g~~v~~v~G 78 (241)
T PRK05340 1 MPTLFISDLHLSPERPAITAAFLRFLRGE-ARQADALYILGDLFEAWIGDDDPSPFAREIAAALKALSDS-GVPCYFMHG 78 (241)
T ss_pred CcEEEEeecCCCCCChhHHHHHHHHHHhh-hccCCEEEEccceeccccccCcCCHHHHHHHHHHHHHHHc-CCeEEEEeC
Confidence 5899999999542 2455555432 2345778899999985 2 2345677777777643 235999999
Q ss_pred CchhhhhhhhhCChHHHHHHhCChhHHHHHHHHHhhCC--ceeEE-eceEEEecCCCCCCCC-chhhhhhccc-cc----
Q 023226 93 NHESRQITQVYGFYDECLRKYGNANVWKIFTDLFDYFP--LTALV-ESEIFCLHGGLSPSIE-TLDNIRNFDR-VQ---- 163 (285)
Q Consensus 93 NHE~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~~~lP--~~~~i-~~~~l~vHgGi~~~~~-~~~~i~~i~r-~~---- 163 (285)
|||..... ......+ ...+| ....+ +.+++++||-.-+... .....+++-| +.
T Consensus 79 NHD~~~~~-------~~~~~~g-----------~~~l~~~~~~~~~g~~i~l~HGd~~~~~d~~y~~~r~~~r~~~~~~~ 140 (241)
T PRK05340 79 NRDFLLGK-------RFAKAAG-----------MTLLPDPSVIDLYGQRVLLLHGDTLCTDDKAYQRFRRKVRNPWLQWL 140 (241)
T ss_pred CCchhhhH-------HHHHhCC-----------CEEeCCcEEEEECCEEEEEECCcccccCCHHHHHHHHHHhCHHHHHH
Confidence 99964311 1111111 01222 22222 3569999998754321 1122222211 10
Q ss_pred --cCCCCCccccccccCCCCCCCCcc-----CC-CCCc-cccCHHHHHHHHHHCCCeEEEeeceeeecceEEecCCeeEE
Q 023226 164 --EVPHEGPMCDLLWSDPDDRCGWGI-----SP-RGAG-YTFGQDISEQFNHTNNLKLIARAHQLVMEGYNWGHEQKVVT 234 (285)
Q Consensus 164 --~~~~~~~~~dllWsdp~~~~~~~~-----~~-rg~~-~~fg~~~~~~fl~~~~~~~iirgH~~~~~G~~~~~~~~~it 234 (285)
.+|. ...+|.- +.+.. +. +... .-..++.+.+.+++.+.+++|.||+..+.-.....++.-++
T Consensus 141 ~~~~p~----~~~~~ia----~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~GH~H~~~~~~~~~~~~~~~ 212 (241)
T PRK05340 141 FLALPL----SIRLRIA----AKMRAKSKAANQSKSLEIMDVNPEAVAALMEKHGVDTLIHGHTHRPAIHQLQAGGQPAT 212 (241)
T ss_pred HHhCCH----HHHHHHH----HHHHHHHHHhcCCCcccccCCCHHHHHHHHHHhCCCEEEECcccCcceeeccCCCcceE
Confidence 0000 0000100 00000 00 1111 12355778888899999999999998764333322321122
Q ss_pred EEecCCccccCCCcEEEEEEcCCCCeEEEEE
Q 023226 235 IFSAPNYCYRCGNMASILEVDDCKGHTFIQF 265 (285)
Q Consensus 235 ifSa~~y~~~~~n~~a~l~i~~~~~~~~~~~ 265 (285)
-.+-++. ...+.++.++++. .+++.|
T Consensus 213 ~~~lgdw----~~~~~~~~~~~~~-~~~~~~ 238 (241)
T PRK05340 213 RIVLGDW----HEQGSVLKVDADG-VELIPF 238 (241)
T ss_pred EEEeCCC----CCCCeEEEEECCc-eEEEeC
Confidence 2222333 2347788888753 566554
No 48
>COG0622 Predicted phosphoesterase [General function prediction only]
Probab=98.78 E-value=4.8e-07 Score=76.06 Aligned_cols=159 Identities=16% Similarity=0.125 Sum_probs=99.4
Q ss_pred CcEEEEecCCCCHHHHHHHHHhcCCCCCCcEEEeCCccCCCCChHHHHHHHHhccccCCCcEEEeCCCchhhhhhhhhCC
Q 023226 26 SPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGF 105 (285)
Q Consensus 26 ~~i~vvGDiHG~~~~l~~il~~~~~~~~~~~vflGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~f 105 (285)
+++.|+||.||...+..+..+.......+.+|.+||++.... +..+..- ...+++.++||.|.....
T Consensus 2 m~ilviSDtH~~~~~~~~~~~~~~~~~~d~vih~GD~~~~~~-----~~~l~~~---~~~~i~~V~GN~D~~~~~----- 68 (172)
T COG0622 2 MKILVISDTHGPLRAIEKALKIFNLEKVDAVIHAGDSTSPFT-----LDALEGG---LAAKLIAVRGNCDGEVDQ----- 68 (172)
T ss_pred cEEEEEeccCCChhhhhHHHHHhhhcCCCEEEECCCcCCccc-----hHHhhcc---cccceEEEEccCCCcccc-----
Confidence 689999999999976666666555566777888999996543 2222220 124699999999964321
Q ss_pred hHHHHHHhCChhHHHHHHHHHhhCCceeE--E-eceEEEecCCCCCCCCchhhhhhccccccCCCCCccccccccCCCCC
Q 023226 106 YDECLRKYGNANVWKIFTDLFDYFPLTAL--V-ESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDR 182 (285)
Q Consensus 106 ~~e~~~~~~~~~~~~~~~~~~~~lP~~~~--i-~~~~l~vHgGi~~~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~ 182 (285)
..+|.... + +-+++++||..-...
T Consensus 69 ---------------------~~~p~~~~~~~~g~ki~l~HGh~~~~~-------------------------------- 95 (172)
T COG0622 69 ---------------------EELPEELVLEVGGVKIFLTHGHLYFVK-------------------------------- 95 (172)
T ss_pred ---------------------ccCChhHeEEECCEEEEEECCCccccc--------------------------------
Confidence 22333332 2 358999999653211
Q ss_pred CCCccCCCCCccccCHHHHHHHHHHCCCeEEEeeceeeecceEEecCCeeEEEEecCCccccCCC--cEEEEEEc-CCCC
Q 023226 183 CGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMEGYNWGHEQKVVTIFSAPNYCYRCGN--MASILEVD-DCKG 259 (285)
Q Consensus 183 ~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iirgH~~~~~G~~~~~~~~~itifSa~~y~~~~~n--~~a~l~i~-~~~~ 259 (285)
.....+..+-+..+.+.+|.||+..+.=. .. ++ +++.+|+-+....| ..+++.++ ++.+
T Consensus 96 -------------~~~~~l~~la~~~~~Dvli~GHTH~p~~~-~~-~~---i~~vNPGS~s~pr~~~~~sy~il~~~~~~ 157 (172)
T COG0622 96 -------------TDLSLLEYLAKELGADVLIFGHTHKPVAE-KV-GG---ILLVNPGSVSGPRGGNPASYAILDVDNLE 157 (172)
T ss_pred -------------cCHHHHHHHHHhcCCCEEEECCCCcccEE-EE-CC---EEEEcCCCcCCCCCCCCcEEEEEEcCCCE
Confidence 11234555566778899999999985433 22 23 56778887754444 33455555 3356
Q ss_pred eEEEEEecC
Q 023226 260 HTFIQFEPA 268 (285)
Q Consensus 260 ~~~~~~~~~ 268 (285)
+....++..
T Consensus 158 ~~~~~~~~~ 166 (172)
T COG0622 158 VEVLFLERD 166 (172)
T ss_pred EEEEEeecc
Confidence 666666554
No 49
>cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain. TTHA0053 is an uncharacterized Thermus thermophilus protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=98.69 E-value=1.8e-07 Score=74.93 Aligned_cols=107 Identities=19% Similarity=0.113 Sum_probs=74.3
Q ss_pred EEEecCCCCHHHHHHHHHhcCCCCCCcEEEeCCccCCCCChHHHHHHHHhccccCCCcEEEeCCCchhhhhhhhhCChHH
Q 023226 29 TICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDE 108 (285)
Q Consensus 29 ~vvGDiHG~~~~l~~il~~~~~~~~~~~vflGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~f~~e 108 (285)
.|+||.||..+.+.++... ..+.+.++++||+. .+++..+..++ . ..++.++||||
T Consensus 1 ~viSDtH~~~~~~~~~~~~--~~~~d~ii~~GD~~------~~~~~~~~~~~-~--~~~~~V~GN~D------------- 56 (129)
T cd07403 1 LVISDTESPALYSPEIKVR--LEGVDLILSAGDLP------KEYLEYLVTML-N--VPVYYVHGNHD------------- 56 (129)
T ss_pred CeeccccCccccchHHHhh--CCCCCEEEECCCCC------hHHHHHHHHHc-C--CCEEEEeCCCc-------------
Confidence 3899999998877776654 35567899999973 34556666542 1 23889999999
Q ss_pred HHHHhCChhHHHHHHHHHhhCCceeEEeceEEEecCCCCCCCCchhhhhhccccccCCCCCccccccccCCCCCCCCccC
Q 023226 109 CLRKYGNANVWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGIS 188 (285)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~l~vHgGi~~~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~ 188 (285)
-+++++|+-+.+.. +.+.
T Consensus 57 ----------------------------~~Ilv~H~pp~~~~-------------------------~~~~--------- 74 (129)
T cd07403 57 ----------------------------VDILLTHAPPAGIG-------------------------DGED--------- 74 (129)
T ss_pred ----------------------------cCEEEECCCCCcCc-------------------------Cccc---------
Confidence 36899997542110 0000
Q ss_pred CCCCccccCHHHHHHHHHHCCCeEEEeeceeeecceE
Q 023226 189 PRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMEGYN 225 (285)
Q Consensus 189 ~rg~~~~fg~~~~~~fl~~~~~~~iirgH~~~~~G~~ 225 (285)
...-|.+.+.+++++.+.++++.||...+..+.
T Consensus 75 ----~~~~g~~~l~~~l~~~~~~~vl~GH~H~~~~~~ 107 (129)
T cd07403 75 ----FAHRGFEAFLDFIDRFRPKLFIHGHTHLNYGYQ 107 (129)
T ss_pred ----ccccCHHHHHHHHHHHCCcEEEEcCcCCCcCcc
Confidence 012355677888888899999999999877665
No 50
>cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain. YydB (BSU40220) is an uncharacterized Bacillus subtilis protein that belongs to the following Bacillus subtilis gene cluster yydB-yydC-yydD-yydG-yydH-yydI-yydJ. YydB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productiv
Probab=98.66 E-value=5.3e-07 Score=73.01 Aligned_cols=117 Identities=20% Similarity=0.198 Sum_probs=76.9
Q ss_pred EEEEecCCCCHH----------HHHHHHHhcCCCCCCcEEEeCCccCCCCCh--HHHHHHHHhccccCCCcEEEeCCCch
Q 023226 28 VTICGDIHGQFH----------DLAELFRIGGKCPDTNYLFMGDYVDRGYYS--VETVTLLVSLKVRYPQRITILRGNHE 95 (285)
Q Consensus 28 i~vvGDiHG~~~----------~l~~il~~~~~~~~~~~vflGD~vDrG~~s--~evl~~l~~lk~~~p~~v~~lrGNHE 95 (285)
++.++|+|=... .|.++++.....+.+.++++||+++.|... .+...++..++... ..+++++||||
T Consensus 1 il~isD~Hl~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GDl~~~~~~~~~~~~~~~~~~l~~~~-~~~~~v~GNHD 79 (144)
T cd07400 1 ILHLSDLHFGPERKPELLALLSLLDRLLAEIKALDPDLVVITGDLTQRGLPEEFEEAREFLDALPAPL-EPVLVVPGNHD 79 (144)
T ss_pred CeEeCccCCCCCcchhHHHHHHHHHHHHHHHhccCCCEEEECCCCCCCCCHHHHHHHHHHHHHccccC-CcEEEeCCCCe
Confidence 467899993221 122344444445567788999999988742 23455566665432 24999999999
Q ss_pred hhhhhhhhCChHHHHHHhCChhHHHHHHHHHhhCCceeEEeceEEEecCCCCCCCCchhhhhhccccccCCCCCcccccc
Q 023226 96 SRQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLL 175 (285)
Q Consensus 96 ~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~l~vHgGi~~~~~~~~~i~~i~r~~~~~~~~~~~dll 175 (285)
. ++++|..+.+....
T Consensus 80 ~------------------------------------------iv~~Hhp~~~~~~~----------------------- 94 (144)
T cd07400 80 V------------------------------------------IVVLHHPLVPPPGS----------------------- 94 (144)
T ss_pred E------------------------------------------EEEecCCCCCCCcc-----------------------
Confidence 6 88999877443210
Q ss_pred ccCCCCCCCCccCCCCCccccCHHHHHHHHHHCCCeEEEeeceeeecceE
Q 023226 176 WSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMEGYN 225 (285)
Q Consensus 176 Wsdp~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iirgH~~~~~G~~ 225 (285)
|.+ . ..+.+.+.+++++.++++++.||+..+..+.
T Consensus 95 ~~~--------------~-~~~~~~~~~~l~~~~~~~~l~GH~H~~~~~~ 129 (144)
T cd07400 95 GRE--------------R-LLDAGDALKLLAEAGVDLVLHGHKHVPYVGN 129 (144)
T ss_pred ccc--------------c-CCCHHHHHHHHHHcCCCEEEECCCCCcCeee
Confidence 100 0 0155678888999999999999999866554
No 51
>TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase. This model represents LpxH, UDP-2,3-diacylglucosamine hydrolase, and essential enzyme in E. coli that catalyzes the fourth step in lipid A biosynthesis. Note that Pseudomonas aeruginosa has both a member of this family that shares this function and a more distant homolog, designated LpxH2, that does not. Many species that produce lipid A lack an lpxH gene in this family; some of those species have an lpxH2 gene instead, although for which the function is unknown.
Probab=98.60 E-value=9.9e-08 Score=83.97 Aligned_cols=203 Identities=10% Similarity=0.079 Sum_probs=99.0
Q ss_pred EEEEecCCCCH------HHHHHHHHhcCCCCCCcEEEeCCccCCC-----CC--hHHHHHHHHhccccCCCcEEEeCCCc
Q 023226 28 VTICGDIHGQF------HDLAELFRIGGKCPDTNYLFMGDYVDRG-----YY--SVETVTLLVSLKVRYPQRITILRGNH 94 (285)
Q Consensus 28 i~vvGDiHG~~------~~l~~il~~~~~~~~~~~vflGD~vDrG-----~~--s~evl~~l~~lk~~~p~~v~~lrGNH 94 (285)
+++++|+|... ..+.+.+..... ..+.++++||++|.. +. ..++...+..|+.. +..+++++|||
T Consensus 1 ~~~iSDlHl~~~~~~~~~~~l~~l~~~~~-~~d~lii~GDi~d~~~~~~~~~~~~~~~~~~l~~L~~~-~~~v~~v~GNH 78 (231)
T TIGR01854 1 TLFISDLHLSPERPDITALFLDFLREEAR-KADALYILGDLFEAWIGDDDPSTLARSVAQAIRQVSDQ-GVPCYFMHGNR 78 (231)
T ss_pred CeEEEecCCCCCChhHHHHHHHHHHhhhc-cCCEEEEcCceeccccCCCCCCHHHHHHHHHHHHHHHC-CCeEEEEcCCC
Confidence 36899999542 234444443322 456788899999952 11 13456666666533 34599999999
Q ss_pred hhhhhhhhhCChHHHHHHhCChhHHHHHHHHHhhCCcee--EE-eceEEEecCCCCCCC-Cchhhhhhccc-cc------
Q 023226 95 ESRQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTA--LV-ESEIFCLHGGLSPSI-ETLDNIRNFDR-VQ------ 163 (285)
Q Consensus 95 E~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~~~lP~~~--~i-~~~~l~vHgGi~~~~-~~~~~i~~i~r-~~------ 163 (285)
|...-. ......+ +..+|-.. .+ +.+++++||-.-..- ......+++-| |.
T Consensus 79 D~~~~~-------~~~~~~g-----------i~~l~~~~~~~~~g~~ill~HGd~~~~~d~~y~~~r~~~r~~~~~~~~~ 140 (231)
T TIGR01854 79 DFLIGK-------RFAREAG-----------MTLLPDPSVIDLYGQKVLLMHGDTLCTDDTAYQAFRAKVHQPWLQRLFL 140 (231)
T ss_pred chhhhH-------HHHHHCC-----------CEEECCCEEEEECCEEEEEEcCccccCCCHHHHHHHHHHhCHHHHHHHH
Confidence 964211 0011111 11122221 22 467999999764311 11111122111 10
Q ss_pred cCCCC--CccccccccCCCCCCCCccCCCCC-ccccCHHHHHHHHHHCCCeEEEeeceeeecceEEecCCeeEEEEecCC
Q 023226 164 EVPHE--GPMCDLLWSDPDDRCGWGISPRGA-GYTFGQDISEQFNHTNNLKLIARAHQLVMEGYNWGHEQKVVTIFSAPN 240 (285)
Q Consensus 164 ~~~~~--~~~~dllWsdp~~~~~~~~~~rg~-~~~fg~~~~~~fl~~~~~~~iirgH~~~~~G~~~~~~~~~itifSa~~ 240 (285)
..|.. ..+...+++....... .+.. -....+..+.+.++..+.+++|.||+..+.=+....++.-.+-.+-++
T Consensus 141 ~l~~~~r~~l~~~~~~~s~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~i~GHtH~~~~~~~~~~~~~~~~~~lgd 216 (231)
T TIGR01854 141 HLPLAVRVKLARKIRAESRADKQ----MKSQDIMDVNPAEVAAVMRRYGVDRLIHGHTHRPAIHPLQADGQPATRIVLGD 216 (231)
T ss_pred hCCHHHHHHHHHHHHHHHHHhcC----CCcchhhCCCHHHHHHHHHHcCCCEEEECCccCcceeecccCCCccEEEEECC
Confidence 00000 0011122221100000 0000 112356778888899999999999998765443332332223344444
Q ss_pred ccccCCCcEEEEEEcCCC
Q 023226 241 YCYRCGNMASILEVDDCK 258 (285)
Q Consensus 241 y~~~~~n~~a~l~i~~~~ 258 (285)
.. ..+.++.+++++
T Consensus 217 W~----~~~~~~~~~~~g 230 (231)
T TIGR01854 217 WY----RQGSILRVDADG 230 (231)
T ss_pred Cc----cCCeEEEEcCCC
Confidence 42 235666776653
No 52
>cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain. YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-dia
Probab=98.44 E-value=4.2e-07 Score=78.90 Aligned_cols=70 Identities=21% Similarity=0.194 Sum_probs=53.6
Q ss_pred CcEEEEecCCCCHH----HHHHHHHhcCCCCCCcEEEeCCccCCCCChH-HHHHHHHhccccCCCcEEEeCCCchhh
Q 023226 26 SPVTICGDIHGQFH----DLAELFRIGGKCPDTNYLFMGDYVDRGYYSV-ETVTLLVSLKVRYPQRITILRGNHESR 97 (285)
Q Consensus 26 ~~i~vvGDiHG~~~----~l~~il~~~~~~~~~~~vflGD~vDrG~~s~-evl~~l~~lk~~~p~~v~~lrGNHE~~ 97 (285)
.++++++|+|.... .+.++++.+.....+.++++||++|.+.... ++..++..++... .++.+.||||..
T Consensus 2 ~~i~~~sDlH~~~~~~~~~~~~~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~l~~l~~~~--~v~~v~GNHD~~ 76 (223)
T cd07385 2 LRIAHLSDLHLGPFVSRERLERLVEKINALKPDLVVLTGDLVDGSVDVLELLLELLKKLKAPL--GVYAVLGNHDYY 76 (223)
T ss_pred CEEEEEeecCCCccCCHHHHHHHHHHHhccCCCEEEEcCcccCCcchhhHHHHHHHhccCCCC--CEEEECCCcccc
Confidence 57999999998744 6777777665555567889999999987764 5666676665443 499999999975
No 53
>PRK04036 DNA polymerase II small subunit; Validated
Probab=98.40 E-value=7.6e-06 Score=80.05 Aligned_cols=72 Identities=22% Similarity=0.346 Sum_probs=45.6
Q ss_pred CCcEEEEecCC-CCH----HHHHHHHHhcC---------CCCCCcEEEeCCccCC-CCCh---------------HHHHH
Q 023226 25 KSPVTICGDIH-GQF----HDLAELFRIGG---------KCPDTNYLFMGDYVDR-GYYS---------------VETVT 74 (285)
Q Consensus 25 ~~~i~vvGDiH-G~~----~~l~~il~~~~---------~~~~~~~vflGD~vDr-G~~s---------------~evl~ 74 (285)
+.++++++|+| |.. ..+..+++.+. ....+.+|++||++|. |..+ .++..
T Consensus 243 ~~~i~~ISDlHlgs~~~~~~~l~~li~~L~g~~~~~~~~~~~~d~lVIaGDivd~~~~~p~~~~~~~~~~~~~~~~~l~~ 322 (504)
T PRK04036 243 KVYAVFISDVHVGSKEFLEDAFEKFIDWLNGEVGNEEEIASRVKYLIIAGDLVDGIGIYPGQEEELEIVDIYEQYEAAAE 322 (504)
T ss_pred ccEEEEEcccCCCCcchhHHHHHHHHHHHhCCCccchhhhhcCCEEEEeCcccccccCCccchhhccchhhHHHHHHHHH
Confidence 46799999999 653 23444444332 1234678899999995 2211 24556
Q ss_pred HHHhccccCCCcEEEeCCCchhhh
Q 023226 75 LLVSLKVRYPQRITILRGNHESRQ 98 (285)
Q Consensus 75 ~l~~lk~~~p~~v~~lrGNHE~~~ 98 (285)
+|.++.... .+++++||||...
T Consensus 323 ~L~~L~~~i--~V~~ipGNHD~~~ 344 (504)
T PRK04036 323 YLKQIPEDI--KIIISPGNHDAVR 344 (504)
T ss_pred HHHhhhcCC--eEEEecCCCcchh
Confidence 666664333 4999999999754
No 54
>cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain. CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is th
Probab=98.40 E-value=4.7e-05 Score=67.98 Aligned_cols=69 Identities=14% Similarity=0.030 Sum_probs=43.2
Q ss_pred cEEEEecCCCCH----------------HHHHHHHHhcCCC--CCCcEEEeCCccCCCCChH-------HHHHHHHhccc
Q 023226 27 PVTICGDIHGQF----------------HDLAELFRIGGKC--PDTNYLFMGDYVDRGYYSV-------ETVTLLVSLKV 81 (285)
Q Consensus 27 ~i~vvGDiHG~~----------------~~l~~il~~~~~~--~~~~~vflGD~vDrG~~s~-------evl~~l~~lk~ 81 (285)
+++++||+|-.. ..|+++++.+... ..+-++++||+++.|.... +....+..+.
T Consensus 6 ~f~~~sD~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~pd~ii~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~- 84 (262)
T cd07395 6 YFIQGADPQLGLIKKNLEGGGDEWDEEIKLTEQAVQAINKLNPKPKFVVVCGDLVNAMPGDELRERQVSDLKDVLSLLD- 84 (262)
T ss_pred EEEEecCCccchhhccccCchhhhhhHHHHHHHHHHHHHhcCCCCCEEEEeCCcCCCCcchhhHHHHHHHHHHHHhhcc-
Confidence 678889999764 2345555555332 4456778999999887531 1223333321
Q ss_pred cCCCcEEEeCCCchhh
Q 023226 82 RYPQRITILRGNHESR 97 (285)
Q Consensus 82 ~~p~~v~~lrGNHE~~ 97 (285)
.+-.++.++||||..
T Consensus 85 -~~vp~~~i~GNHD~~ 99 (262)
T cd07395 85 -PDIPLVCVCGNHDVG 99 (262)
T ss_pred -CCCcEEEeCCCCCCC
Confidence 123499999999974
No 55
>PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional
Probab=98.37 E-value=3.9e-05 Score=69.17 Aligned_cols=69 Identities=13% Similarity=0.097 Sum_probs=45.8
Q ss_pred CCcEEEEecCC-C-----------CHHHHHHHHHhcCC--CCCCcEEEeCCccCCCCC-hH-HHHHHHHhccccCCCcEE
Q 023226 25 KSPVTICGDIH-G-----------QFHDLAELFRIGGK--CPDTNYLFMGDYVDRGYY-SV-ETVTLLVSLKVRYPQRIT 88 (285)
Q Consensus 25 ~~~i~vvGDiH-G-----------~~~~l~~il~~~~~--~~~~~~vflGD~vDrG~~-s~-evl~~l~~lk~~~p~~v~ 88 (285)
..+++.++|+| . ....|.++++.+.. +..+-+|+.||+++.|.. .. .+...+..+ +..++
T Consensus 14 ~~~i~~iSD~Hl~~~~~~~~~~~~~~~~l~~~i~~i~~~~~~~D~vvitGDl~~~~~~~~~~~~~~~l~~l----~~Pv~ 89 (275)
T PRK11148 14 RVRILQITDTHLFADEHETLLGVNTWESYQAVLEAIRAQQHEFDLIVATGDLAQDHSSEAYQHFAEGIAPL----RKPCV 89 (275)
T ss_pred CEEEEEEcCcccCCCCCCceeccCHHHHHHHHHHHHHhhCCCCCEEEECCCCCCCCCHHHHHHHHHHHhhc----CCcEE
Confidence 46899999999 1 24567777876533 234668889999998742 22 122333333 23499
Q ss_pred EeCCCchhh
Q 023226 89 ILRGNHESR 97 (285)
Q Consensus 89 ~lrGNHE~~ 97 (285)
.++||||..
T Consensus 90 ~v~GNHD~~ 98 (275)
T PRK11148 90 WLPGNHDFQ 98 (275)
T ss_pred EeCCCCCCh
Confidence 999999973
No 56
>PRK11340 phosphodiesterase YaeI; Provisional
Probab=98.37 E-value=8.3e-07 Score=80.03 Aligned_cols=71 Identities=20% Similarity=0.185 Sum_probs=53.2
Q ss_pred CCcEEEEecCCCC----HHHHHHHHHhcCCCCCCcEEEeCCccCCC--CChHHHHHHHHhccccCCCcEEEeCCCchhh
Q 023226 25 KSPVTICGDIHGQ----FHDLAELFRIGGKCPDTNYLFMGDYVDRG--YYSVETVTLLVSLKVRYPQRITILRGNHESR 97 (285)
Q Consensus 25 ~~~i~vvGDiHG~----~~~l~~il~~~~~~~~~~~vflGD~vDrG--~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~ 97 (285)
..++++++|+|.. ...+.++++.......+-++++||++|++ ....++...|..|+...| ++.+.||||..
T Consensus 49 ~~rI~~lSDlH~~~~~~~~~l~~~v~~i~~~~pDlVli~GD~~d~~~~~~~~~~~~~L~~L~~~~p--v~~V~GNHD~~ 125 (271)
T PRK11340 49 PFKILFLADLHYSRFVPLSLISDAIALGIEQKPDLILLGGDYVLFDMPLNFSAFSDVLSPLAECAP--TFACFGNHDRP 125 (271)
T ss_pred CcEEEEEcccCCCCcCCHHHHHHHHHHHHhcCCCEEEEccCcCCCCccccHHHHHHHHHHHhhcCC--EEEecCCCCcc
Confidence 3689999999976 55677777776555567788999999953 233456677777775555 99999999964
No 57
>cd07393 MPP_DR1119 Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain. DR1119 is an uncharacterized Deinococcus radiodurans protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordinat
Probab=98.20 E-value=2.7e-05 Score=68.60 Aligned_cols=65 Identities=22% Similarity=0.268 Sum_probs=40.0
Q ss_pred EEEEecCCCC---------HH----HHHH-HHHhcC--CCCCCcEEEeCCccCCCCCh--HHHHHHHHhccccCCCcEEE
Q 023226 28 VTICGDIHGQ---------FH----DLAE-LFRIGG--KCPDTNYLFMGDYVDRGYYS--VETVTLLVSLKVRYPQRITI 89 (285)
Q Consensus 28 i~vvGDiHG~---------~~----~l~~-il~~~~--~~~~~~~vflGD~vDrG~~s--~evl~~l~~lk~~~p~~v~~ 89 (285)
+++++|||-. +. ++.+ +.+... .++.+-+|+.||++++++.. .+.+.+|.++ |..+++
T Consensus 1 ~~~~sDlHl~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~D~viiaGDl~~~~~~~~~~~~l~~l~~l----~~~v~~ 76 (232)
T cd07393 1 IFAIADLHLNLDPTKPMDVFGPEWKNHTEKIKENWDNVVAPEDIVLIPGDISWAMKLEEAKLDLAWIDAL----PGTKVL 76 (232)
T ss_pred CeEEEeeccCCCCCCCCcccCccHHHHHHHHHHHHHhcCCCCCEEEEcCCCccCCChHHHHHHHHHHHhC----CCCeEE
Confidence 5789999955 22 2322 222211 13566777899999877533 2344455443 223899
Q ss_pred eCCCchh
Q 023226 90 LRGNHES 96 (285)
Q Consensus 90 lrGNHE~ 96 (285)
+.||||.
T Consensus 77 V~GNHD~ 83 (232)
T cd07393 77 LKGNHDY 83 (232)
T ss_pred EeCCccc
Confidence 9999996
No 58
>TIGR03729 acc_ester putative phosphoesterase. Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system.
Probab=98.10 E-value=7e-06 Score=72.48 Aligned_cols=68 Identities=21% Similarity=0.189 Sum_probs=48.8
Q ss_pred cEEEEecCCCCH------HHHHHHHHhcCCCCCCcEEEeCCccCCCCChHHHHHHHHhccccCCCcEEEeCCCchhh
Q 023226 27 PVTICGDIHGQF------HDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESR 97 (285)
Q Consensus 27 ~i~vvGDiHG~~------~~l~~il~~~~~~~~~~~vflGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~ 97 (285)
++.+++|+|.++ ..+.++++.+.....+-+|+.||++++.+.+.+.+..+.++ .+..+++++||||..
T Consensus 1 ki~~iSDlH~~~~~~~~~~~l~~~~~~~~~~~~d~vv~~GDl~~~~~~~~~~~~~l~~~---~~~pv~~v~GNHD~~ 74 (239)
T TIGR03729 1 KIAFSSDLHIDLNHFDTEEMLETLAQYLKKQKIDHLHIAGDISNDFQRSLPFIEKLQEL---KGIKVTFNAGNHDML 74 (239)
T ss_pred CEEEEEeecCCCCCCCHHHHHHHHHHHHHhcCCCEEEECCccccchhhHHHHHHHHHHh---cCCcEEEECCCCCCC
Confidence 588999999763 23566666665455677889999999876666666655553 223499999999964
No 59
>TIGR00619 sbcd exonuclease SbcD. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=98.02 E-value=1.2e-05 Score=71.93 Aligned_cols=72 Identities=22% Similarity=0.255 Sum_probs=49.0
Q ss_pred CcEEEEecCCC-C-----------HHHHHHHHHhcCCCCCCcEEEeCCccCCCCChHHH----HHHHHhccccCCCcEEE
Q 023226 26 SPVTICGDIHG-Q-----------FHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVET----VTLLVSLKVRYPQRITI 89 (285)
Q Consensus 26 ~~i~vvGDiHG-~-----------~~~l~~il~~~~~~~~~~~vflGD~vDrG~~s~ev----l~~l~~lk~~~p~~v~~ 89 (285)
++++.++|+|- . ...|.++++.+.....+.+++.||++|+...+.+. ..++..|+...|-.+++
T Consensus 1 mkilh~SD~Hlg~~~~~~~~~~~~~~~l~~l~~~~~~~~~D~lli~GDi~d~~~p~~~~~~~~~~~l~~l~~~~~i~v~~ 80 (253)
T TIGR00619 1 MRILHTSDWHLGKTLEGVSRLAEQKAFLDDLLEFAKAEQIDALLVAGDVFDTANPPAEAQELFNAFFRNLSDANPIPIVV 80 (253)
T ss_pred CEEEEEhhhcCCCccCCCChHHHHHHHHHHHHHHHHHcCCCEEEECCccCCCCCCCHHHHHHHHHHHHHHHhcCCceEEE
Confidence 57899999993 2 23455565555444567788999999988655443 34455555433335999
Q ss_pred eCCCchhh
Q 023226 90 LRGNHESR 97 (285)
Q Consensus 90 lrGNHE~~ 97 (285)
+.||||..
T Consensus 81 i~GNHD~~ 88 (253)
T TIGR00619 81 ISGNHDSA 88 (253)
T ss_pred EccCCCCh
Confidence 99999975
No 60
>cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain. DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAP
Probab=98.00 E-value=7.8e-05 Score=63.84 Aligned_cols=70 Identities=13% Similarity=0.077 Sum_probs=41.7
Q ss_pred CcEEEEecCCCCHH-----------HHHHHHH-hcCCCCCCcEEEeCCccCCCCCh---HHHHHHHHhccccCCCcEEEe
Q 023226 26 SPVTICGDIHGQFH-----------DLAELFR-IGGKCPDTNYLFMGDYVDRGYYS---VETVTLLVSLKVRYPQRITIL 90 (285)
Q Consensus 26 ~~i~vvGDiHG~~~-----------~l~~il~-~~~~~~~~~~vflGD~vDrG~~s---~evl~~l~~lk~~~p~~v~~l 90 (285)
.++.+++|+|-... ...+.++ .+.....+.+|++||+++.+... .+.+..+.+......-.++++
T Consensus 3 ~ki~~isDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~GDl~~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~ 82 (199)
T cd07383 3 FKILQFADLHFGEGEGTCEGCEADLKTVAFIERVLDAEKPDLVVLTGDLITGENTNDNSTSALDKAVSPMIDRKIPWAAT 82 (199)
T ss_pred eEEEEEeeecccCCCCCCCcchhhHHHHHHHHHHHhhcCCCEEEECCccccCCCCchHHHHHHHHHHHHHHHcCCCEEEE
Confidence 47899999996222 1122222 23333456788999999976653 444444333222112238999
Q ss_pred CCCch
Q 023226 91 RGNHE 95 (285)
Q Consensus 91 rGNHE 95 (285)
.||||
T Consensus 83 ~GNHD 87 (199)
T cd07383 83 FGNHD 87 (199)
T ss_pred CccCC
Confidence 99999
No 61
>cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain. Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=97.96 E-value=1.9e-05 Score=70.93 Aligned_cols=68 Identities=21% Similarity=0.277 Sum_probs=46.8
Q ss_pred cEEEEecCC--C-----------CHHHHHHHHHhcCCCCCCcEEEeCCccCCCCC----hHH-HHHHHHhccccCCCcEE
Q 023226 27 PVTICGDIH--G-----------QFHDLAELFRIGGKCPDTNYLFMGDYVDRGYY----SVE-TVTLLVSLKVRYPQRIT 88 (285)
Q Consensus 27 ~i~vvGDiH--G-----------~~~~l~~il~~~~~~~~~~~vflGD~vDrG~~----s~e-vl~~l~~lk~~~p~~v~ 88 (285)
|+.++||+| . ....+.++++.+.....+-+|++||+++.|.. ..+ +...+..+. -.++
T Consensus 2 r~~~iSD~H~~~~~~~~~~~~~~~~~~l~~~i~~i~~~~~d~vv~~GDlv~~~~~~~~~~~~~~~~~l~~l~----~p~~ 77 (267)
T cd07396 2 RFGIIADIQYADEDDTRPRYYRNSLEKLEEAVEEWNRESLDFVVQLGDIIDGDNARAEEALDAVLAILDRLK----GPVH 77 (267)
T ss_pred eEEEEeccccccCCCcccchHHHhHHHHHHHHHHHHcCCCCEEEECCCeecCCCchHHHHHHHHHHHHHhcC----CCEE
Confidence 689999999 2 24567777777654456678899999998873 222 233333333 2399
Q ss_pred EeCCCchhhh
Q 023226 89 ILRGNHESRQ 98 (285)
Q Consensus 89 ~lrGNHE~~~ 98 (285)
.++||||...
T Consensus 78 ~v~GNHD~~~ 87 (267)
T cd07396 78 HVLGNHDLYN 87 (267)
T ss_pred EecCcccccc
Confidence 9999999753
No 62
>COG1409 Icc Predicted phosphohydrolases [General function prediction only]
Probab=97.88 E-value=0.0015 Score=58.43 Aligned_cols=73 Identities=19% Similarity=0.288 Sum_probs=50.7
Q ss_pred CcEEEEecCCCC------HHHHHHHHHhcCCCCCCcEEEeCCccCCCCC-hHH-HHHHHHhccccCCCcEEEeCCCchhh
Q 023226 26 SPVTICGDIHGQ------FHDLAELFRIGGKCPDTNYLFMGDYVDRGYY-SVE-TVTLLVSLKVRYPQRITILRGNHESR 97 (285)
Q Consensus 26 ~~i~vvGDiHG~------~~~l~~il~~~~~~~~~~~vflGD~vDrG~~-s~e-vl~~l~~lk~~~p~~v~~lrGNHE~~ 97 (285)
++++.|+|+|-. ...+.++++.+...+.+-+|+.||+.+.|.. +.+ ...+|. +...|..+++++||||..
T Consensus 1 ~~i~~isD~H~~~~~~~~~~~~~~~~~~i~~~~~D~~v~tGDl~~~~~~~~~~~~~~~l~--~~~~~~~~~~vpGNHD~~ 78 (301)
T COG1409 1 MRIAHISDLHLGALGVDSEELLEALLAAIEQLKPDLLVVTGDLTNDGEPEEYRRLKELLA--RLELPAPVIVVPGNHDAR 78 (301)
T ss_pred CeEEEEecCcccccccchHHHHHHHHHHHhcCCCCEEEEccCcCCCCCHHHHHHHHHHHh--hccCCCceEeeCCCCcCC
Confidence 478999999977 3455666677776666889999999999642 222 223333 123455699999999987
Q ss_pred hhh
Q 023226 98 QIT 100 (285)
Q Consensus 98 ~~~ 100 (285)
..+
T Consensus 79 ~~~ 81 (301)
T COG1409 79 VVN 81 (301)
T ss_pred chH
Confidence 654
No 63
>cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain. GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosa
Probab=97.87 E-value=3.3e-05 Score=67.69 Aligned_cols=67 Identities=24% Similarity=0.281 Sum_probs=46.3
Q ss_pred cEEEEecCCCC------------HHHHHHHHHhcCCC--CCCcEEEeCCccCCCCCh--HHHHHHHHhccccCCCcEEEe
Q 023226 27 PVTICGDIHGQ------------FHDLAELFRIGGKC--PDTNYLFMGDYVDRGYYS--VETVTLLVSLKVRYPQRITIL 90 (285)
Q Consensus 27 ~i~vvGDiHG~------------~~~l~~il~~~~~~--~~~~~vflGD~vDrG~~s--~evl~~l~~lk~~~p~~v~~l 90 (285)
|+++++|+|=. ...+.++++.+... ..+-+|++||+++.|... ..+...+..++ -.++.+
T Consensus 1 r~~~iSDlH~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~d~vi~~GDl~~~~~~~~~~~~~~~l~~~~----~p~~~v 76 (240)
T cd07402 1 LLAQISDLHLRADGEGALLGVDTAASLEAVLAHINALHPRPDLVLVTGDLTDDGSPESYERLRELLAALP----IPVYLL 76 (240)
T ss_pred CEEEEeCCccCCCCcceecCcCHHHHHHHHHHHHHhcCCCCCEEEECccCCCCCCHHHHHHHHHHHhhcC----CCEEEe
Confidence 58899999944 34677777765443 456788999999987532 22444444443 338999
Q ss_pred CCCchhh
Q 023226 91 RGNHESR 97 (285)
Q Consensus 91 rGNHE~~ 97 (285)
+||||..
T Consensus 77 ~GNHD~~ 83 (240)
T cd07402 77 PGNHDDR 83 (240)
T ss_pred CCCCCCH
Confidence 9999974
No 64
>PHA02546 47 endonuclease subunit; Provisional
Probab=97.87 E-value=2.5e-05 Score=72.76 Aligned_cols=71 Identities=23% Similarity=0.336 Sum_probs=47.9
Q ss_pred CcEEEEecCC-C-----------CHHHHHHHHHhcCCCCCCcEEEeCCccCCC-CChHHHHHHHHh-----ccccCCCcE
Q 023226 26 SPVTICGDIH-G-----------QFHDLAELFRIGGKCPDTNYLFMGDYVDRG-YYSVETVTLLVS-----LKVRYPQRI 87 (285)
Q Consensus 26 ~~i~vvGDiH-G-----------~~~~l~~il~~~~~~~~~~~vflGD~vDrG-~~s~evl~~l~~-----lk~~~p~~v 87 (285)
++++.+||+| | ....|.++++.+.....+.+|+.||++|+. +.+.+++.++.. ++ ..+-.+
T Consensus 1 MKilhiSD~HLG~~~~~~~~~~~~~~~l~~ii~~a~~~~vD~VliaGDlfD~~~~~~~~~~~~~~~~l~~~L~-~~gi~v 79 (340)
T PHA02546 1 MKILLIGDQHLGVRKDDPWFQNYQLKFIKQAIEYSKAHGITTWIQLGDTFDVRKAITQNTMNFVREKIFDLLK-EAGITL 79 (340)
T ss_pred CeEEEEeeecCCCcCCChhhHHHHHHHHHHHHHHHHHcCCCEEEECCcccCCCCCCCHHHHHHHHHHHHHHHH-HCCCeE
Confidence 5899999999 4 234556666655555667888999999985 445454444432 22 223359
Q ss_pred EEeCCCchhh
Q 023226 88 TILRGNHESR 97 (285)
Q Consensus 88 ~~lrGNHE~~ 97 (285)
++|.||||..
T Consensus 80 ~~I~GNHD~~ 89 (340)
T PHA02546 80 HVLVGNHDMY 89 (340)
T ss_pred EEEccCCCcc
Confidence 9999999974
No 65
>cd00844 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain. Dbr1 is an RNA lariat debranching enzyme that hydrolyzes 2'-5' phosphodiester bonds at the branch points of excised intron lariats. This alignment model represents the N-terminal metallophosphatase domain of Dbr1. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal s
Probab=97.87 E-value=8.2e-05 Score=66.80 Aligned_cols=69 Identities=16% Similarity=0.212 Sum_probs=44.0
Q ss_pred EEEEecCCCCHHHHHHHHHhc---CCCCCCcEEEeCCccCCCCCh-HHH----------H---HHHHhccccCCCcEEEe
Q 023226 28 VTICGDIHGQFHDLAELFRIG---GKCPDTNYLFMGDYVDRGYYS-VET----------V---TLLVSLKVRYPQRITIL 90 (285)
Q Consensus 28 i~vvGDiHG~~~~l~~il~~~---~~~~~~~~vflGD~vDrG~~s-~ev----------l---~~l~~lk~~~p~~v~~l 90 (285)
|+|+||+||+++.+.+.++.. ...+.+-+|++||+-..+..+ .+. . .++..+ ...|--+++|
T Consensus 1 i~v~Gd~HG~~~~~~~~~~~~~~~~~~~~D~lI~~GDf~~~~~~~d~~~~~~p~k~~~~~~f~~~~~g~-~~~p~~t~fi 79 (262)
T cd00844 1 IAVEGCCHGELDKIYETLEKIEKKEGTKVDLLICCGDFQAVRNEADLKCMAVPPKYRKMGDFYKYYSGE-KKAPILTIFI 79 (262)
T ss_pred CEEEecCCccHHHHHHHHHHHHHhcCCCCcEEEEcCCCCCcCCcchhhhhccchhhhhhhhHHHHhcCC-ccCCeeEEEE
Confidence 589999999999887655433 234567788999996544322 222 1 222222 2234447999
Q ss_pred CCCchhh
Q 023226 91 RGNHESR 97 (285)
Q Consensus 91 rGNHE~~ 97 (285)
.||||..
T Consensus 80 ~GNHE~~ 86 (262)
T cd00844 80 GGNHEAS 86 (262)
T ss_pred CCCCCCH
Confidence 9999964
No 66
>cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain. MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to
Probab=97.79 E-value=0.00011 Score=60.90 Aligned_cols=47 Identities=21% Similarity=0.278 Sum_probs=28.8
Q ss_pred CCCCcEEEeCCccCCCCCh-HH----HHHHHHhccccC-CCcEEEeCCCchhh
Q 023226 51 CPDTNYLFMGDYVDRGYYS-VE----TVTLLVSLKVRY-PQRITILRGNHESR 97 (285)
Q Consensus 51 ~~~~~~vflGD~vDrG~~s-~e----vl~~l~~lk~~~-p~~v~~lrGNHE~~ 97 (285)
...+.++++||++|.+... .+ .+..+.++.... +-.+++++||||..
T Consensus 37 ~~pd~vv~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~GNHD~~ 89 (156)
T cd08165 37 LQPDVVFVLGDLFDEGKWSTDEEWEDYVERFKKMFGHPPDLPLHVVVGNHDIG 89 (156)
T ss_pred cCCCEEEECCCCCCCCccCCHHHHHHHHHHHHHHhccCCCCeEEEEcCCCCcC
Confidence 3456788999999987642 12 222222222111 23599999999964
No 67
>cd07391 MPP_PF1019 Pyrococcus furiosus PF1019 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to PF1019, an uncharacterized Pyrococcus furiosus protein. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for pro
Probab=97.77 E-value=8.9e-05 Score=62.16 Aligned_cols=56 Identities=20% Similarity=0.223 Sum_probs=33.1
Q ss_pred HHHHHHhcCCCCCCcEEEeCCccCCCCCh--HHHHHH-HHhccccCCCcEEEeCCCchhh
Q 023226 41 LAELFRIGGKCPDTNYLFMGDYVDRGYYS--VETVTL-LVSLKVRYPQRITILRGNHESR 97 (285)
Q Consensus 41 l~~il~~~~~~~~~~~vflGD~vDrG~~s--~evl~~-l~~lk~~~p~~v~~lrGNHE~~ 97 (285)
+.++.+.+...+.+.+|++||+++..... .+.... +..+. ..+-.+++++||||..
T Consensus 30 ~~~l~~~~~~~~~d~lii~GDl~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~i~GNHD~~ 88 (172)
T cd07391 30 LERLDRLIEEYGPERLIILGDLKHSFGGLSRQEFEEVAFLRLL-AKDVDVILIRGNHDGG 88 (172)
T ss_pred HHHHHHHHHhcCCCEEEEeCcccccccccCHHHHHHHHHHHhc-cCCCeEEEEcccCccc
Confidence 34444444445568899999999865432 222111 12221 2234699999999975
No 68
>COG2908 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.76 E-value=0.0001 Score=64.42 Aligned_cols=197 Identities=17% Similarity=0.178 Sum_probs=99.9
Q ss_pred EEecCCCC------HHHHHHHHHhcCCCCCCcEEEeCCccCC--CCC-----hHHHHHHHHhccccCCCcEEEeCCCchh
Q 023226 30 ICGDIHGQ------FHDLAELFRIGGKCPDTNYLFMGDYVDR--GYY-----SVETVTLLVSLKVRYPQRITILRGNHES 96 (285)
Q Consensus 30 vvGDiHG~------~~~l~~il~~~~~~~~~~~vflGD~vDr--G~~-----s~evl~~l~~lk~~~p~~v~~lrGNHE~ 96 (285)
.|+|+|=. .+.|.+.|+... +..+.+.++||++|- |.+ -.+|...|..+. +.+.+++.+.||||.
T Consensus 2 FISDlHL~~~~p~~t~~fl~Fl~~~a-~~ad~lyilGDifd~w~g~~~~~~~~~~V~~~l~~~a-~~G~~v~~i~GN~Df 79 (237)
T COG2908 2 FISDLHLGPKRPALTAFFLDFLREEA-AQADALYILGDIFDGWIGDDEPPQLHRQVAQKLLRLA-RKGTRVYYIHGNHDF 79 (237)
T ss_pred eeeccccCCCCcHHHHHHHHHHHhcc-ccCcEEEEechhhhhhhcCCcccHHHHHHHHHHHHHH-hcCCeEEEecCchHH
Confidence 68999954 234445555432 245778899999863 322 134555555543 234679999999994
Q ss_pred hhhhhhhCChHHHHHHhCChhHHHHHHHHHhhCCceeEE---eceEEEecCCCCCCCC-chhhhhhcccc-------ccC
Q 023226 97 RQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALV---ESEIFCLHGGLSPSIE-TLDNIRNFDRV-------QEV 165 (285)
Q Consensus 97 ~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i---~~~~l~vHgGi~~~~~-~~~~i~~i~r~-------~~~ 165 (285)
. +...++ ...|. +.-+|-...+ +.+++++||..--... .....+...+- ...
T Consensus 80 l-l~~~f~------~~~g~----------~~l~~~~~~~~l~g~~~Ll~HGD~f~t~~~~y~~~r~~~~~~~~~~lflnl 142 (237)
T COG2908 80 L-LGKRFA------QEAGG----------MTLLPDPIVLDLYGKRILLAHGDTFCTDDRAYQWFRYKVHWAWLQLLFLNL 142 (237)
T ss_pred H-HHHHHH------hhcCc----------eEEcCcceeeeecCcEEEEEeCCcccchHHHHHHHHHHcccHHHHHHHHHh
Confidence 4 221111 11111 2223444333 5789999997532110 00000000000 000
Q ss_pred CCC--CccccccccCCCCCCCCccCCCCCc---cccCHHHHHHHHHHCCCeEEEeeceeeecceEEecCCeeEEEEecCC
Q 023226 166 PHE--GPMCDLLWSDPDDRCGWGISPRGAG---YTFGQDISEQFNHTNNLKLIARAHQLVMEGYNWGHEQKVVTIFSAPN 240 (285)
Q Consensus 166 ~~~--~~~~dllWsdp~~~~~~~~~~rg~~---~~fg~~~~~~fl~~~~~~~iirgH~~~~~G~~~~~~~~~itifSa~~ 240 (285)
|.. ..+..-+|+.- .|.+...... .-..++++.+-+++++++.+|.||+..+..-... + ..
T Consensus 143 ~l~~R~ri~~k~r~~s----~~~k~~~~~~~~i~d~~~~~v~~~~~~~~vd~vI~GH~Hr~ai~~i~--~--------~~ 208 (237)
T COG2908 143 PLRVRRRIAYKIRSLS----SWAKKKVKKAVNIMDVNPAAVADEARRHGVDGVIHGHTHRPAIHNIP--G--------IT 208 (237)
T ss_pred HHHHHHHHHHHHHHhh----HHhHHhhhhHHHHHHhhHHHHHHHHHHcCCCEEEecCcccHhhccCC--C--------ce
Confidence 000 00011144422 2322211111 1245667777789999999999999987655442 2 11
Q ss_pred cc--ccCCCcEEEEEEcCCCC
Q 023226 241 YC--YRCGNMASILEVDDCKG 259 (285)
Q Consensus 241 y~--~~~~n~~a~l~i~~~~~ 259 (285)
|+ +.-...+++++++.+..
T Consensus 209 yi~lGdW~~~~s~~~v~~~~~ 229 (237)
T COG2908 209 YINLGDWVSEGSILEVDDGGL 229 (237)
T ss_pred EEecCcchhcceEEEEecCcE
Confidence 22 11225689999987653
No 69
>TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related. Members of this uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11. SbcD is a subunit of the SbcCD nuclease of E. coli that can cleave DNA hairpins to unblock stalled DNA replication. All members of this family are archaeal.
Probab=97.69 E-value=0.00012 Score=64.24 Aligned_cols=69 Identities=16% Similarity=0.189 Sum_probs=45.3
Q ss_pred CcEEEEecCC-CCHHH----------------HHHHHHhcCCCCCCcEEEeCCccCCCCC---hHHHHHHHHhccccCCC
Q 023226 26 SPVTICGDIH-GQFHD----------------LAELFRIGGKCPDTNYLFMGDYVDRGYY---SVETVTLLVSLKVRYPQ 85 (285)
Q Consensus 26 ~~i~vvGDiH-G~~~~----------------l~~il~~~~~~~~~~~vflGD~vDrG~~---s~evl~~l~~lk~~~p~ 85 (285)
.+..+|+|+| |--.. |.++.+.......+.+|++||+.+.... ..++.+++..+. .
T Consensus 15 ~~~LvisDlHLG~~~~~~~~Gi~~P~~~~~~~l~rl~~li~~~~~d~vIi~GDl~h~~~~~~~~~~~~~~l~~~~----~ 90 (225)
T TIGR00024 15 GDKAVIADLHLGFERHLDEQGVMVPGFQFREIIERALSIADKYGIEALIINGDLKHEFKKGLEWRFIREFIEVTF----R 90 (225)
T ss_pred cCeEEEEeccCCCHHHHHhcCCcCChhHHHHHHHHHHHHHhhcCCCEEEEcCccccccCChHHHHHHHHHHHhcC----C
Confidence 6799999999 54332 2233333334456789999999975543 334445565543 3
Q ss_pred cEEEeCCCchhhh
Q 023226 86 RITILRGNHESRQ 98 (285)
Q Consensus 86 ~v~~lrGNHE~~~ 98 (285)
.+++++||||...
T Consensus 91 ~v~~V~GNHD~~~ 103 (225)
T TIGR00024 91 DLILIRGNHDALI 103 (225)
T ss_pred cEEEECCCCCCcc
Confidence 5999999999753
No 70
>PRK10966 exonuclease subunit SbcD; Provisional
Probab=97.69 E-value=8e-05 Score=71.03 Aligned_cols=71 Identities=25% Similarity=0.338 Sum_probs=46.3
Q ss_pred CcEEEEecCC-CC-H------HH----HHHHHHhcCCCCCCcEEEeCCccCCCCChHHH----HHHHHhccccCCCcEEE
Q 023226 26 SPVTICGDIH-GQ-F------HD----LAELFRIGGKCPDTNYLFMGDYVDRGYYSVET----VTLLVSLKVRYPQRITI 89 (285)
Q Consensus 26 ~~i~vvGDiH-G~-~------~~----l~~il~~~~~~~~~~~vflGD~vDrG~~s~ev----l~~l~~lk~~~p~~v~~ 89 (285)
++++.++|+| |. + .+ |..+++.+.....+.+|+.||++|++..+.+. ..++..|+.. +-.+++
T Consensus 1 mkilh~SDlHlG~~~~~~~~~~~~~~~l~~l~~~i~~~~~D~viIaGDifD~~~p~~~a~~~~~~~l~~L~~~-~~~v~~ 79 (407)
T PRK10966 1 MRILHTSDWHLGQNFYSKSRAAEHQAFLDWLLEQVQEHQVDAIIVAGDIFDTGSPPSYARELYNRFVVNLQQT-GCQLVV 79 (407)
T ss_pred CEEEEEcccCCCCcccCcccHHHHHHHHHHHHHHHHhcCCCEEEECCccccCCCCcHHHHHHHHHHHHHHHhc-CCcEEE
Confidence 5789999999 32 1 11 33444544445667788999999998655432 2344444432 234999
Q ss_pred eCCCchhh
Q 023226 90 LRGNHESR 97 (285)
Q Consensus 90 lrGNHE~~ 97 (285)
+.||||..
T Consensus 80 I~GNHD~~ 87 (407)
T PRK10966 80 LAGNHDSV 87 (407)
T ss_pred EcCCCCCh
Confidence 99999975
No 71
>cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d
Probab=97.68 E-value=8.1e-05 Score=62.21 Aligned_cols=66 Identities=27% Similarity=0.419 Sum_probs=44.0
Q ss_pred EEEEecCCCCHHHH---------------HHHHHhcC--CCCCCcEEEeCCccCCCCChHHHHHHHHhccccCCCcEEEe
Q 023226 28 VTICGDIHGQFHDL---------------AELFRIGG--KCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITIL 90 (285)
Q Consensus 28 i~vvGDiHG~~~~l---------------~~il~~~~--~~~~~~~vflGD~vDrG~~s~evl~~l~~lk~~~p~~v~~l 90 (285)
+++++|+|=..... .++++... ..+.+.++++||+++++..+.. +.++.++. ..++++
T Consensus 1 ~~~isD~Hlg~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~d~vi~~GDl~~~~~~~~~-~~~l~~~~----~~~~~v 75 (168)
T cd07390 1 IYFTSDTHFGHANILRFCNRPFDDVEEMDEALIRNWNETVGPDDTVYHLGDFSFGGKAGTE-LELLSRLN----GRKHLI 75 (168)
T ss_pred CeEecccccCCHHHHccCCCCCCCHHHHHHHHHHHHhhhcCCCCEEEEeCCCCCCCChHHH-HHHHHhCC----CCeEEE
Confidence 36889999655432 22333322 2346788999999999986644 55555543 349999
Q ss_pred CCCchhhh
Q 023226 91 RGNHESRQ 98 (285)
Q Consensus 91 rGNHE~~~ 98 (285)
+||||...
T Consensus 76 ~GNHD~~~ 83 (168)
T cd07390 76 KGNHDSSL 83 (168)
T ss_pred eCCCCchh
Confidence 99999754
No 72
>cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain. Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functi
Probab=97.65 E-value=7.4e-05 Score=64.47 Aligned_cols=72 Identities=25% Similarity=0.259 Sum_probs=47.9
Q ss_pred cEEEEecCC-CCH--------------HHHHHHHHhcCCCCCCcEEEeCCccCCCCChHHH----HHHHHhccccCCCcE
Q 023226 27 PVTICGDIH-GQF--------------HDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVET----VTLLVSLKVRYPQRI 87 (285)
Q Consensus 27 ~i~vvGDiH-G~~--------------~~l~~il~~~~~~~~~~~vflGD~vDrG~~s~ev----l~~l~~lk~~~p~~v 87 (285)
|++.++|+| |.. ..|.++++.+.....+.+|+.||+++....+.+. ..++.+++. ..-.+
T Consensus 1 ~i~~~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~GD~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v 79 (223)
T cd00840 1 RFLHTADWHLGKPLKGLSRDRRREDQFEAFEEIVELAIEEKVDFVLIAGDLFDSNNPSPEALELLIEALRRLKE-AGIPV 79 (223)
T ss_pred CeEEeccccCCccccCcCcccchHHHHHHHHHHHHHHHhcCCCEEEECCcccCCCCCCHHHHHHHHHHHHHHHH-CCCCE
Confidence 588999999 322 2466666665555566788999999987655443 334444431 12349
Q ss_pred EEeCCCchhhhh
Q 023226 88 TILRGNHESRQI 99 (285)
Q Consensus 88 ~~lrGNHE~~~~ 99 (285)
+++.||||....
T Consensus 80 ~~~~GNHD~~~~ 91 (223)
T cd00840 80 FIIAGNHDSPSR 91 (223)
T ss_pred EEecCCCCCccc
Confidence 999999997653
No 73
>PF06874 FBPase_2: Firmicute fructose-1,6-bisphosphatase; InterPro: IPR009164 Fructose 1,6-bisphosphatase catalyses the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate []. This is an essential reaction in the process of gluconeogenesis, the process by which non-carbohydrate precursors are converted to glucose, and hence this enzyme is found almost universally. Enzyme activity can be regulated by a number of different mechanisms including AMP inhibition, cylic AMP-dependent phosphorylation and light-dependent-activation. This entry represents a group of fructose 1,6-bisphosphatases found within the Firmicutes (low GC Gram-positive bacteria) which do not show any significant sequence similarity to the enzymes from other organisms. The Bacillus subtilis enzyme is inhibited by AMP, though this can be overcome by phosphoenolpyruvate, and is dependent on Mn(2+) [, ]. Mutants lacking this enzyme are apparently still able to grow on gluconeogenic growth substrates such as malate and glycerol.; GO: 0042132 fructose 1,6-bisphosphate 1-phosphatase activity, 0006094 gluconeogenesis
Probab=97.49 E-value=0.0024 Score=62.83 Aligned_cols=43 Identities=23% Similarity=0.329 Sum_probs=37.1
Q ss_pred CCcEEEeCCccCCCCChHHHHHHHHhccccCCCcEEEeCCCchhhhhh
Q 023226 53 DTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQIT 100 (285)
Q Consensus 53 ~~~~vflGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~ 100 (285)
.+++-.+||+.||||.+-.+++.|+.. .+|=+--||||-.++-
T Consensus 185 VDhLHIvGDIyDRGp~pd~ImD~Lm~~-----hsvDIQWGNHDIlWMG 227 (640)
T PF06874_consen 185 VDHLHIVGDIYDRGPRPDKIMDRLMNY-----HSVDIQWGNHDILWMG 227 (640)
T ss_pred hhheeecccccCCCCChhHHHHHHhcC-----CCccccccchHHHHHH
Confidence 567889999999999999999999975 3577899999987763
No 74
>PF14582 Metallophos_3: Metallophosphoesterase, calcineurin superfamily; PDB: 1UF3_B 2YVT_A.
Probab=97.45 E-value=0.0024 Score=55.59 Aligned_cols=72 Identities=17% Similarity=0.189 Sum_probs=43.7
Q ss_pred CCcEEEEecCCCCHHHHHHHHHhcCCCCCCcEEEeCCccCCCCChHHHH--------------------------HHHHh
Q 023226 25 KSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETV--------------------------TLLVS 78 (285)
Q Consensus 25 ~~~i~vvGDiHG~~~~l~~il~~~~~~~~~~~vflGD~vDrG~~s~evl--------------------------~~l~~ 78 (285)
..+|.+++|.||+++.|.++.+.+.....+-++|+||++-....+.|-. .++..
T Consensus 5 ~~kilA~s~~~g~~e~l~~l~~~~~e~~~D~~v~~G~~~~~~a~~~e~~~a~~~~r~p~k~~i~~e~~~~~e~~~~ff~~ 84 (255)
T PF14582_consen 5 VRKILAISNFRGDFELLERLVEVIPEKGPDAVVFVGDLLKAEARSDEYERAQEEQREPDKSEINEEECYDSEALDKFFRI 84 (255)
T ss_dssp --EEEEEE--TT-HHHHHHHHHHHHHHT-SEEEEES-SS-TCHHHHHHHHHHHTT----THHHHHHHHHHHHHHHHHHHH
T ss_pred chhheeecCcchHHHHHHHHHhhccccCCCEEEEeccccccchhhhHHHHHhhhccCcchhhhhhhhhhhHHHHHHHHHH
Confidence 3479999999999999999998877667788999999986554443333 33333
Q ss_pred ccccCCCcEEEeCCCchhh
Q 023226 79 LKVRYPQRITILRGNHESR 97 (285)
Q Consensus 79 lk~~~p~~v~~lrGNHE~~ 97 (285)
|.... --+++|+||||..
T Consensus 85 L~~~~-~p~~~vPG~~Dap 102 (255)
T PF14582_consen 85 LGELG-VPVFVVPGNMDAP 102 (255)
T ss_dssp HHCC--SEEEEE--TTS-S
T ss_pred HHhcC-CcEEEecCCCCch
Confidence 33222 2389999999975
No 75
>TIGR00583 mre11 DNA repair protein (mre11). All proteins in this family for which functions are known are subunits of a nuclease complex made up of multiple proteins including MRE11 and RAD50 homologs. The functions of this nuclease complex include recombinational repair and non-homolgous end joining. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The proteins in this family are distantly related to proteins in the SbcCD complex of bacteria.
Probab=97.44 E-value=0.00032 Score=66.74 Aligned_cols=51 Identities=16% Similarity=0.181 Sum_probs=41.0
Q ss_pred CCcEEEEecCCCC------------HHHHHHHHHhcCCCCCCcEEEeCCccCCCCChHHHHHH
Q 023226 25 KSPVTICGDIHGQ------------FHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTL 75 (285)
Q Consensus 25 ~~~i~vvGDiHG~------------~~~l~~il~~~~~~~~~~~vflGD~vDrG~~s~evl~~ 75 (285)
.+|+.+++|+|-- +..|.++++.+.....+-+|+.||+.|+..-|.+++..
T Consensus 3 ~mKIlh~SD~HlG~~~~~~~r~~D~~~~f~eil~~a~~~~vD~VLiaGDLFd~~~Ps~~~~~~ 65 (405)
T TIGR00583 3 TIRILVSTDNHVGYGENDPVRGDDSWNTFEEVLQIAKEQDVDMILLGGDLFHENKPSRKSLYQ 65 (405)
T ss_pred ceEEEEEcCCCCCCccCCchhhhhHHHHHHHHHHHHHHcCCCEEEECCccCCCCCCCHHHHHH
Confidence 4789999999942 55778888887666678888999999999888777644
No 76
>cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain. The small subunit of the archeal DNA polymerase II contains a C-terminal metallophosphatase domain. This domain is thought to be functionally active because the active site residues required for phosphoesterase activity in other members of this superfamily are intact. The archeal replicative DNA polymerases are thought to possess intrinsic phosphatase activity that hydrolyzes the pyrophosphate released during nucleotide polymerization. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiestera
Probab=97.36 E-value=0.00035 Score=61.82 Aligned_cols=67 Identities=21% Similarity=0.282 Sum_probs=40.3
Q ss_pred EEEecCC--CCH---HHHHHHHHhcC-CC----CCCcEEEeCCccCCCC-----C----------h-HHHHHHHHhcccc
Q 023226 29 TICGDIH--GQF---HDLAELFRIGG-KC----PDTNYLFMGDYVDRGY-----Y----------S-VETVTLLVSLKVR 82 (285)
Q Consensus 29 ~vvGDiH--G~~---~~l~~il~~~~-~~----~~~~~vflGD~vDrG~-----~----------s-~evl~~l~~lk~~ 82 (285)
++++|+| +.. ..+..+++.+. .. ..+.+|++||++|+.. . . .++..++.+|...
T Consensus 2 ~~iSDlHl~~~~~~~~~~~~l~~~l~~~~~~~~~~d~lvi~GDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~ 81 (243)
T cd07386 2 VFISDVHVGSKTFLEDAFEKFVRWLNGEDDSASRVKYLIIAGDLVDGIGVYPGQEEELEILDIYEQYEEAAEYLSDVPSH 81 (243)
T ss_pred EEecccCCCchhhhHHHHHHHHHHHcCCcccccCccEEEEeCCcccccccCCcchhhhhhhhHHHHHHHHHHHHHhcccC
Confidence 6899999 332 22233443322 21 2367889999999731 0 0 2244555555533
Q ss_pred CCCcEEEeCCCchhh
Q 023226 83 YPQRITILRGNHESR 97 (285)
Q Consensus 83 ~p~~v~~lrGNHE~~ 97 (285)
-.|+++.||||..
T Consensus 82 --~~v~~ipGNHD~~ 94 (243)
T cd07386 82 --IKIIIIPGNHDAV 94 (243)
T ss_pred --CeEEEeCCCCCcc
Confidence 3599999999974
No 77
>cd08166 MPP_Cdc1_like_1 uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain. A functionally uncharacterized subgroup related to the metallophosphatase domain of Saccharomyces cerevisiae Cdc1, S. cerevisiae Ted1 and human MPPE1. Cdc1 is an endoplasmic reticulum-localized transmembrane lipid phosphatase and is a subunit of DNA polymerase delta. TED1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), acts together with Emp24p and Erv25p in cargo exit from the ER. The MPPE1 gene is a candidate susceptibility gene for Bipolar disorder. Proteins in this uncharacterized subgroup belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like R
Probab=97.33 E-value=0.0022 Score=54.97 Aligned_cols=46 Identities=20% Similarity=0.353 Sum_probs=32.6
Q ss_pred CCCcEEEeCCccCCCCCh--HHHHHHHHhccccCC----CcEEEeCCCchhh
Q 023226 52 PDTNYLFMGDYVDRGYYS--VETVTLLVSLKVRYP----QRITILRGNHESR 97 (285)
Q Consensus 52 ~~~~~vflGD~vDrG~~s--~evl~~l~~lk~~~p----~~v~~lrGNHE~~ 97 (285)
..+-++||||++|.|+.+ .+..+.+.+++..++ -.++.|.||||.-
T Consensus 42 ~PD~Vi~lGDL~D~G~~~~~~e~~e~l~Rf~~If~~~~~~~~~~VpGNHDIG 93 (195)
T cd08166 42 QPDIVIFLGDLMDEGSIANDDEYYSYVQRFINIFEVPNGTKIIYLPGDNDIG 93 (195)
T ss_pred CCCEEEEeccccCCCCCCCHHHHHHHHHHHHHHhcCCCCCcEEEECCCCCcC
Confidence 456788999999999964 336666666553322 3588999999953
No 78
>KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only]
Probab=97.33 E-value=2e-05 Score=74.75 Aligned_cols=236 Identities=11% Similarity=-0.033 Sum_probs=147.0
Q ss_pred HHHHHHHHHHHHHhcCCCccccC----CcEEEEecCCCCHHHHHHHHHhcCCCC-CCcEEEeCCccCCCCChHHHHHHHH
Q 023226 3 QVRVLCEKAKEILMDESNVQPVK----SPVTICGDIHGQFHDLAELFRIGGKCP-DTNYLFMGDYVDRGYYSVETVTLLV 77 (285)
Q Consensus 3 ~~~~l~~~~~~il~~e~~~~~~~----~~i~vvGDiHG~~~~l~~il~~~~~~~-~~~~vflGD~vDrG~~s~evl~~l~ 77 (285)
++..+++.+.+++..+|+..... .-.+.++|.||.+.|+.++++.- +. ..-|++-|++++++....+.+..+.
T Consensus 19 ~fd~avdlysKaI~ldpnca~~~anRa~a~lK~e~~~~Al~Da~kaie~d--P~~~K~Y~rrg~a~m~l~~~~~A~~~l~ 96 (476)
T KOG0376|consen 19 VFDVAVDLYSKAIELDPNCAIYFANRALAHLKVESFGGALHDALKAIELD--PTYIKAYVRRGTAVMALGEFKKALLDLE 96 (476)
T ss_pred hHHHHHHHHHHHHhcCCcceeeechhhhhheeechhhhHHHHHHhhhhcC--chhhheeeeccHHHHhHHHHHHHHHHHH
Confidence 45667888889999999876542 34889999999999999988764 32 3348899999999999999999999
Q ss_pred hccccCCCcEEEeCCCchhhhhhhhhCChHHHHHHhCCh--hHHHHHHHHHhhCC-ceeEEeceEEEecCCCCC------
Q 023226 78 SLKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNA--NVWKIFTDLFDYFP-LTALVESEIFCLHGGLSP------ 148 (285)
Q Consensus 78 ~lk~~~p~~v~~lrGNHE~~~~~~~~~f~~e~~~~~~~~--~~~~~~~~~~~~lP-~~~~i~~~~l~vHgGi~~------ 148 (285)
..+...|+...+.|++||+..+-..++|..+....++.. .+...+.. ..++ +.....+.++=-| -+.-
T Consensus 97 ~~~~l~Pnd~~~~r~~~Ec~~~vs~~~fe~ai~~~~~d~~s~~~~~~~~--~~~~~i~~~y~g~~le~~-kvt~e~vk~~ 173 (476)
T KOG0376|consen 97 KVKKLAPNDPDATRKIDECNKIVSEEKFEKAILTPEGDKKSVVEMKIDE--EDMDLIESDYSGPVLEDH-KVTLEFVKTL 173 (476)
T ss_pred HhhhcCcCcHHHHHHHHHHHHHHHHHhhhhcccCCccCCcccccccccc--ccccccccccCCcccccc-hhhHHHHHHH
Confidence 999999999999999999999888888887766666421 11111111 1111 2222222111111 0000
Q ss_pred ------------C--CCchhhhhhccccccCCC-CCccccccccCCCCCC-CCccCCCCCccccCHHHHHHHHHHCCCeE
Q 023226 149 ------------S--IETLDNIRNFDRVQEVPH-EGPMCDLLWSDPDDRC-GWGISPRGAGYTFGQDISEQFNHTNNLKL 212 (285)
Q Consensus 149 ------------~--~~~~~~i~~i~r~~~~~~-~~~~~dllWsdp~~~~-~~~~~~rg~~~~fg~~~~~~fl~~~~~~~ 212 (285)
. ..-+++...+.+....+- ...-.+..|+++.... .|....++.+...++..+..|+.+.+..-
T Consensus 174 ~~~~~~~~~L~~k~a~~i~~~~~~~~~~l~~~ve~~~~~d~~~sv~gd~hGqfydl~nif~l~g~Ps~t~~ylfngdfv~ 253 (476)
T KOG0376|consen 174 MEVFKNQKKLPKKYAYSILDLAKTILRKLPSLVEISVPGDVKISVCGDTHGQFYDLLNIFELNGLPSETNPYLFNGDFVD 253 (476)
T ss_pred HHhhhcccccccccceeeHHHHhhHHhcCCcceEeecCCCceEEecCCccccccchhhhHhhcCCCCCcccccccCceee
Confidence 0 000111111111110000 0123567888887643 34555566666667777778887777777
Q ss_pred EEeeceee------------ecceEEec---CCeeEEEEecCCccc
Q 023226 213 IARAHQLV------------MEGYNWGH---EQKVVTIFSAPNYCY 243 (285)
Q Consensus 213 iirgH~~~------------~~G~~~~~---~~~~itifSa~~y~~ 243 (285)
+.+.+.-+ ..+|...+ ++.++++|+.+.++.
T Consensus 254 rgs~s~e~~~~~~~~kl~~pn~~fl~rgn~Es~~m~~iy~f~~e~~ 299 (476)
T KOG0376|consen 254 RGSWSVEVILTLFAFKLLYPNNFFLLRGNHESDNMNKIYGFEGEVK 299 (476)
T ss_pred ecccceeeeeeehhhcccCCcceeeccCCccchHHHHHhCCCcchh
Confidence 77777632 22332222 235889999988873
No 79
>cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain. Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diver
Probab=97.27 E-value=0.00025 Score=64.13 Aligned_cols=69 Identities=20% Similarity=0.223 Sum_probs=41.7
Q ss_pred CcEEEEecCCC----CHHHHHHHHHhcCCCCCCcEEEeCCccCCCCCh-----HHHHHHHHhccccCCCcEEEeCCCchh
Q 023226 26 SPVTICGDIHG----QFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYS-----VETVTLLVSLKVRYPQRITILRGNHES 96 (285)
Q Consensus 26 ~~i~vvGDiHG----~~~~l~~il~~~~~~~~~~~vflGD~vDrG~~s-----~evl~~l~~lk~~~p~~v~~lrGNHE~ 96 (285)
-+++|+||.|. ....+.++.+. ....+-+|++||+++.+... -..+..+..+....| ++.++||||.
T Consensus 5 ~~f~v~gD~~~~~~~~~~~~~~l~~~--~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~P--~~~~~GNHD~ 80 (294)
T cd00839 5 FKFAVFGDMGQNTNNSTNTLDHLEKE--LGNYDAILHVGDLAYADGYNNGSRWDTFMRQIEPLASYVP--YMVTPGNHEA 80 (294)
T ss_pred EEEEEEEECCCCCCCcHHHHHHHHhc--cCCccEEEEcCchhhhcCCccchhHHHHHHHHHHHHhcCC--cEEcCccccc
Confidence 47999999995 23333333332 23345677899999544322 222333333333445 8999999997
Q ss_pred hh
Q 023226 97 RQ 98 (285)
Q Consensus 97 ~~ 98 (285)
..
T Consensus 81 ~~ 82 (294)
T cd00839 81 DY 82 (294)
T ss_pred cc
Confidence 64
No 80
>COG1408 Predicted phosphohydrolases [General function prediction only]
Probab=97.26 E-value=0.00061 Score=61.90 Aligned_cols=71 Identities=20% Similarity=0.168 Sum_probs=50.3
Q ss_pred CcEEEEecCCCCHHH--HHHHHHhcCCCCCCcEEEeCCccCC-C-CChHHHHHHHHhccccCCCcEEEeCCCchhhh
Q 023226 26 SPVTICGDIHGQFHD--LAELFRIGGKCPDTNYLFMGDYVDR-G-YYSVETVTLLVSLKVRYPQRITILRGNHESRQ 98 (285)
Q Consensus 26 ~~i~vvGDiHG~~~~--l~~il~~~~~~~~~~~vflGD~vDr-G-~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~ 98 (285)
-+|+-++|+|-.... ..+.+........+-+++.|||+|+ . +....+...|..|+..+| ++.+.||||...
T Consensus 45 ~~iv~lSDlH~~~~~~~~~~~~~~i~~~~~DlivltGD~~~~~~~~~~~~~~~~L~~L~~~~g--v~av~GNHd~~~ 119 (284)
T COG1408 45 LKIVQLSDLHSLPFREEKLALLIAIANELPDLIVLTGDYVDGDRPPGVAALALFLAKLKAPLG--VFAVLGNHDYGV 119 (284)
T ss_pred eEEEEeehhhhchhhHHHHHHHHHHHhcCCCEEEEEeeeecCCCCCCHHHHHHHHHhhhccCC--EEEEeccccccc
Confidence 469999999987765 2233333333333777899999995 4 445557777888886654 999999998653
No 81
>cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain. YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues l
Probab=97.23 E-value=0.00049 Score=59.32 Aligned_cols=28 Identities=4% Similarity=-0.071 Sum_probs=21.9
Q ss_pred CHHHHHHHHHHCCCeEEEeeceeeecce
Q 023226 197 GQDISEQFNHTNNLKLIARAHQLVMEGY 224 (285)
Q Consensus 197 g~~~~~~fl~~~~~~~iirgH~~~~~G~ 224 (285)
....+.+.++..+++.+|.||+..+.-.
T Consensus 177 ~~~~~~~~~~~~~~~~~i~GH~H~~~~~ 204 (217)
T cd07398 177 FEEAVARLARRKGVDGVICGHTHRPALH 204 (217)
T ss_pred HHHHHHHHHHhcCCCEEEECCCCCCCeE
Confidence 3456677788899999999999876443
No 82
>cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain. TMEM62 (transmembrane protein 62) is an uncharacterized Homo sapiens transmembrane protein with an N-terminal metallophosphatase domain. TMEM62 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=97.22 E-value=0.00086 Score=59.92 Aligned_cols=70 Identities=19% Similarity=0.065 Sum_probs=42.0
Q ss_pred EEEEecCCCCHH------HH-HHHHHhcCCCCCCcEEEeCCccCCCCCh-------H----HHHHHHHhccccCCCcEEE
Q 023226 28 VTICGDIHGQFH------DL-AELFRIGGKCPDTNYLFMGDYVDRGYYS-------V----ETVTLLVSLKVRYPQRITI 89 (285)
Q Consensus 28 i~vvGDiHG~~~------~l-~~il~~~~~~~~~~~vflGD~vDrG~~s-------~----evl~~l~~lk~~~p~~v~~ 89 (285)
++.++|+|-... .. ..+++.+.....+-+|++||++|+.... . +.+..+..+....+..++.
T Consensus 2 ~~~iSDlH~g~~~~~~~~~~~~~~~~~i~~~~pd~i~~~GD~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 81 (256)
T cd07401 2 FVHISDIHVSSFHPPNRAQDETFCSNFIDVIKPALVLATGDLTDNKTGNKLPSYQYQEEWQKYYNILKESSVINKEKWFD 81 (256)
T ss_pred EEEecccccCCcCchhhhhHHHHHHHHHHhhCCCEEEEccccccccccCCCcccccHHHHHHHHHHHHHhCCCCcceEEE
Confidence 567899996222 12 3344444444556788999999986521 1 2233333332323456899
Q ss_pred eCCCchhh
Q 023226 90 LRGNHESR 97 (285)
Q Consensus 90 lrGNHE~~ 97 (285)
++||||..
T Consensus 82 v~GNHD~~ 89 (256)
T cd07401 82 IRGNHDLF 89 (256)
T ss_pred eCCCCCcC
Confidence 99999985
No 83
>KOG3325 consensus Membrane coat complex Retromer, subunit VPS29/PEP11 [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.21 E-value=0.0085 Score=48.72 Aligned_cols=127 Identities=25% Similarity=0.412 Sum_probs=87.7
Q ss_pred EEEEecCCC--CHHHHHHHHHhcCCCCC-CcEEEeCCccCCCCChHHHHHHHHhccccCCCcEEEeCCCchhhhhhhhhC
Q 023226 28 VTICGDIHG--QFHDLAELFRIGGKCPD-TNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYG 104 (285)
Q Consensus 28 i~vvGDiHG--~~~~l~~il~~~~~~~~-~~~vflGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~ 104 (285)
+.++||+|= ...+|-.-|++.-.|++ .+++++|++. |.|++++|..+. +.++++||--|.-
T Consensus 3 vL~lgD~HiP~Ra~~Lp~KFkklLvPgki~hilctGNlc-----s~e~~dylk~l~----~dvhiVrGeFD~~------- 66 (183)
T KOG3325|consen 3 VLVLGDLHIPHRANDLPAKFKKLLVPGKIQHILCTGNLC-----SKESYDYLKTLS----SDVHIVRGEFDEN------- 66 (183)
T ss_pred EEEeccccCCccccccCHHHHhccCCCceeEEEEeCCcc-----hHHHHHHHHhhC----CCcEEEecccCcc-------
Confidence 678999995 34456555665545554 5677899975 679999999886 5699999987643
Q ss_pred ChHHHHHHhCChhHHHHHHHHHhhCCceeEE---eceEEEecCCCCCCCCchhhhhhccccccCCCCCccccccccCCCC
Q 023226 105 FYDECLRKYGNANVWKIFTDLFDYFPLTALV---ESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDD 181 (285)
Q Consensus 105 f~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i---~~~~l~vHgGi~~~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~ 181 (285)
.+ .|...++ .=++-|+||-.- +=|.||
T Consensus 67 ------~~----------------yP~~kvvtvGqfkIG~chGhqV--------------------------iP~gd~-- 96 (183)
T KOG3325|consen 67 ------LK----------------YPENKVVTVGQFKIGLCHGHQV--------------------------IPWGDP-- 96 (183)
T ss_pred ------cc----------------CCccceEEeccEEEEeecCcEe--------------------------ecCCCH--
Confidence 12 2333333 226889998631 237777
Q ss_pred CCCCccCCCCCccccCHHHHHHHHHHCCCeEEEeeceeeecceEEecCCeeEEEEecCCcc
Q 023226 182 RCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMEGYNWGHEQKVVTIFSAPNYC 242 (285)
Q Consensus 182 ~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iirgH~~~~~G~~~~~~~~~itifSa~~y~ 242 (285)
+++.-.-+..+++.++-||+...+.|+. +|+ .|.+|+-|
T Consensus 97 -----------------~sL~~LaRqldvDILl~G~Th~f~Aye~--eg~---ffvnPGSa 135 (183)
T KOG3325|consen 97 -----------------ESLALLARQLDVDILLTGHTHKFEAYEH--EGK---FFVNPGSA 135 (183)
T ss_pred -----------------HHHHHHHHhcCCcEEEeCCceeEEEEEe--CCc---EEeCCCcc
Confidence 4555566678999999999999888865 454 36666655
No 84
>cd08163 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. Cdc1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site
Probab=96.96 E-value=0.012 Score=52.80 Aligned_cols=25 Identities=8% Similarity=0.008 Sum_probs=22.5
Q ss_pred ccCHHHHHHHHHHCCCeEEEeecee
Q 023226 195 TFGQDISEQFNHTNNLKLIARAHQL 219 (285)
Q Consensus 195 ~fg~~~~~~fl~~~~~~~iirgH~~ 219 (285)
+-.++.+++.|+..+-.+|+.||..
T Consensus 202 ~l~~~~s~~il~~~~P~~vfsGhdH 226 (257)
T cd08163 202 LLEPSLSEVILKAVQPVIAFSGDDH 226 (257)
T ss_pred ecCHHHHHHHHHhhCCcEEEecCCC
Confidence 4578999999999999999999996
No 85
>cd00845 MPP_UshA_N_like Escherichia coli UshA-like family, N-terminal metallophosphatase domain. This family includes the bacterial enzyme UshA, and related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich
Probab=96.93 E-value=0.0018 Score=57.30 Aligned_cols=65 Identities=29% Similarity=0.358 Sum_probs=44.5
Q ss_pred cEEEEecCCCCH---------HHHHHHHHhcCCC-CCCcEEEeCCccCCCCChH-----HHHHHHHhccccCCCcEEEeC
Q 023226 27 PVTICGDIHGQF---------HDLAELFRIGGKC-PDTNYLFMGDYVDRGYYSV-----ETVTLLVSLKVRYPQRITILR 91 (285)
Q Consensus 27 ~i~vvGDiHG~~---------~~l~~il~~~~~~-~~~~~vflGD~vDrG~~s~-----evl~~l~~lk~~~p~~v~~lr 91 (285)
+++.++|+||.+ ..+.++++..... ++.-++..||+++.++.+. .++..+.++.. .+ +..
T Consensus 2 ~i~~~sD~hg~~~~~~~~~g~~~l~~~v~~~~~~~~~~l~v~~GD~~~~~~~~~~~~~~~~~~~l~~~g~----d~-~~~ 76 (252)
T cd00845 2 TILHTNDLHGHFEPAGGVGGAARLATLIKEERAENENTLLLDAGDNFDGSPPSTATKGEANIELMNALGY----DA-VTI 76 (252)
T ss_pred EEEEecccccCccccCCcCCHHHHHHHHHHHHhcCCCeEEEeCCccCCCccchhccCCcHHHHHHHhcCC----CE-Eee
Confidence 588999999886 5667777766443 3334567999999877643 46666655532 23 445
Q ss_pred CCchh
Q 023226 92 GNHES 96 (285)
Q Consensus 92 GNHE~ 96 (285)
||||.
T Consensus 77 GNHe~ 81 (252)
T cd00845 77 GNHEF 81 (252)
T ss_pred ccccc
Confidence 99995
No 86
>COG4186 Predicted phosphoesterase or phosphohydrolase [General function prediction only]
Probab=96.87 E-value=0.007 Score=49.67 Aligned_cols=67 Identities=19% Similarity=0.209 Sum_probs=42.4
Q ss_pred EEEEecCCC------------CHHHHHHHH-Hhc--CCCCCCcEEEeCCccCCCCChHHHHHHHHhccccCCCcEEEeCC
Q 023226 28 VTICGDIHG------------QFHDLAELF-RIG--GKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRG 92 (285)
Q Consensus 28 i~vvGDiHG------------~~~~l~~il-~~~--~~~~~~~~vflGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrG 92 (285)
++.+||+|= +.+....++ ... -..|++.+.+|||+.-.--+..+....+.+| |+++++++|
T Consensus 6 myfisDtHfgh~nvi~~~pfsn~~ehd~vil~N~nntv~p~D~lwhLGDl~~~~n~~~~a~~IlerL----nGrkhlv~G 81 (186)
T COG4186 6 MYFISDTHFGHKNVISMRPFSNPDEHDEVILSNWNNTVGPDDVLWHLGDLSSGANRERAAGLILERL----NGRKHLVPG 81 (186)
T ss_pred EEEecccccCCcceeecCCCCCHHHHhHHHHHhHHhcCCccceEEEecccccccchhhHHHHHHHHc----CCcEEEeeC
Confidence 788899883 333333222 211 1246777889999985444445555555555 477999999
Q ss_pred Cchhhh
Q 023226 93 NHESRQ 98 (285)
Q Consensus 93 NHE~~~ 98 (285)
|||..-
T Consensus 82 NhDk~~ 87 (186)
T COG4186 82 NHDKCH 87 (186)
T ss_pred CCCCCc
Confidence 999653
No 87
>cd07384 MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. This group also contains Saccharomyces cerevisiae TED1 (Trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), which acts together wit
Probab=96.74 E-value=0.0024 Score=53.55 Aligned_cols=49 Identities=22% Similarity=0.282 Sum_probs=30.4
Q ss_pred CCCCCCcEEEeCCccCCCCChH--H---HHHHHHhccc-cC----CCcEEEeCCCchhh
Q 023226 49 GKCPDTNYLFMGDYVDRGYYSV--E---TVTLLVSLKV-RY----PQRITILRGNHESR 97 (285)
Q Consensus 49 ~~~~~~~~vflGD~vDrG~~s~--e---vl~~l~~lk~-~~----p~~v~~lrGNHE~~ 97 (285)
.....+.+|++||++|.+.... + .+..+.++.. .. +-.+++++||||..
T Consensus 42 ~~~~pd~vi~lGDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~GNHD~g 100 (171)
T cd07384 42 QRLKPDVVLFLGDLFDGGRIADSEEWEEYVKRFKKIFFLPSNGLEDIPVYYVPGNHDIG 100 (171)
T ss_pred HhcCCCEEEEeccccCCcEeCCHHHHHHHHHHHHHHhcccccccCCceEEEECCccccC
Confidence 3345677889999999887431 2 3333333211 11 23599999999975
No 88
>cd07380 MPP_CWF19_N Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain. CWF19 cell cycle control protein (also known as CWF19-like 1 (CWF19L1) in Homo sapiens), N-terminal metallophosphatase domain. CWF19 contains C-terminal domains similar to that found in the CwfJ cell cycle control protein. The metallophosphatase domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site
Probab=96.52 E-value=0.0079 Score=49.46 Aligned_cols=119 Identities=18% Similarity=0.218 Sum_probs=78.6
Q ss_pred EEEecCCCCHHHHHHHHHhcC--CCCCCcEEEeCCccCCCCChHHHHHHHHhccccCCCcEEEeCCCchhhhhhhhhCCh
Q 023226 29 TICGDIHGQFHDLAELFRIGG--KCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFY 106 (285)
Q Consensus 29 ~vvGDiHG~~~~l~~il~~~~--~~~~~~~vflGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~f~ 106 (285)
.|+||+||+++.+.+-++... ..+-+-+|++||+..-...+-+.-.+ ..=....|--.+++-||||
T Consensus 1 LV~G~~~G~l~~~~~kv~~~~~k~gpFd~~ic~Gdff~~~~~~~~~~~y-~~g~~~~pipTyf~ggn~~----------- 68 (150)
T cd07380 1 LVCGDVNGRLKALFEKVNTINKKKGPFDALLCVGDFFGDDEDDEELEAY-KDGSKKVPIPTYFLGGNNP----------- 68 (150)
T ss_pred CeeecCCccHHHHHHHHHHHhcccCCeeEEEEecCccCCccchhhHHHH-hcCCccCCCCEEEECCCCC-----------
Confidence 489999999999887776532 23456688899998765555333333 3334455666999999998
Q ss_pred HHHHHHhCChhHHHHHHHHHhhCCceeEEeceEEEecCCCCCCCCchhhhhhccccccCCCCCccccccccCCCCCCCCc
Q 023226 107 DECLRKYGNANVWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWG 186 (285)
Q Consensus 107 ~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~l~vHgGi~~~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~ 186 (285)
+-+||++|.-+. .+...++. ..+
T Consensus 69 -----------------------------~~DILlTh~wP~-gi~~~~~~-------------------~~~-------- 91 (150)
T cd07380 69 -----------------------------GVDILLTSEWPK-GISKLSKV-------------------PFE-------- 91 (150)
T ss_pred -----------------------------CCCEEECCCCch-hhhhhCCC-------------------ccc--------
Confidence 446888886542 21111110 000
Q ss_pred cCCCCCccccCHHHHHHHHHHCCCeEEEeeceee
Q 023226 187 ISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLV 220 (285)
Q Consensus 187 ~~~rg~~~~fg~~~~~~fl~~~~~~~iirgH~~~ 220 (285)
..+..-|...+.++++...=++.+.||..+
T Consensus 92 ----~~~~~~GS~~i~~l~~~lkPrYhf~gh~~~ 121 (150)
T cd07380 92 ----ETLLICGSDLIAELAKKLKPRYHFAGLEGV 121 (150)
T ss_pred ----ccccCCCCHHHHHHHHHcCCCeEeecCCCc
Confidence 012245778999999999999999999764
No 89
>cd07410 MPP_CpdB_N Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain. CpdB is a bacterial periplasmic protein with an N-terminal metallophosphatase domain and a C-terminal 3'-nucleotidase domain. This alignment model represents the N-terminal metallophosphatase domain, which has 2',3'-cyclic phosphodiesterase activity, hydrolyzing the 2',3'-cyclic phosphates of adenosine, guanosine, cytosine and uridine to yield nucleoside and phosphate. CpdB also hydrolyzes the chromogenic substrates p-nitrophenyl phosphate (PNPP), bis(PNPP) and p-nitrophenyl phosphorylcholine (NPPC). CpdB is thought to play a scavenging role during RNA hydrolysis by converting the non-transportable nucleotides produced by RNaseI to nucleosides which can easily enter a cell for use as a carbon source. This family also includes YfkN, a Bacillus subtilis nucleotide phosphoesterase with two copies of each of the metallophosphatase and 3'-nucleotidase domains. The N-terminal metallophos
Probab=96.45 E-value=0.0051 Score=55.45 Aligned_cols=65 Identities=20% Similarity=0.255 Sum_probs=41.1
Q ss_pred cEEEEecCCCCH----------------HHHHHHHHhcCCCCCCcEEE-eCCccCCCCCh-----------HHHHHHHHh
Q 023226 27 PVTICGDIHGQF----------------HDLAELFRIGGKCPDTNYLF-MGDYVDRGYYS-----------VETVTLLVS 78 (285)
Q Consensus 27 ~i~vvGDiHG~~----------------~~l~~il~~~~~~~~~~~vf-lGD~vDrG~~s-----------~evl~~l~~ 78 (285)
+|+.++|+||++ ..+..+++.......+.+++ .||+++..+.+ ..++..+..
T Consensus 2 ~il~t~D~Hg~~~~~~~~~~~~~~~gg~~~l~~~i~~~r~~~~~~l~ld~GD~~~gs~~~~~~~~~~~~~~~~~~~~ln~ 81 (277)
T cd07410 2 RILATSDLHGNLLPYDYYTDKPDASGGLARVATLIKKARAENPNTLLIDNGDTIQGSPLADYYAKIEDGDPHPMIAAMNA 81 (277)
T ss_pred eEEEEeccccceeCccccCCCcCCccCHHHHHHHHHHHHhcCCCeEEEeCCccCCccHHHHHhhhcccCCCChHHHHHHh
Confidence 578899999986 34566666654333334443 79999866522 235666666
Q ss_pred ccccCCCcEEEeCCCchh
Q 023226 79 LKVRYPQRITILRGNHES 96 (285)
Q Consensus 79 lk~~~p~~v~~lrGNHE~ 96 (285)
+.. -++..||||.
T Consensus 82 ~g~-----d~~~lGNHe~ 94 (277)
T cd07410 82 LGY-----DAGTLGNHEF 94 (277)
T ss_pred cCC-----CEEeecccCc
Confidence 542 2445699995
No 90
>cd07387 MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2), C-terminal domain. PolD2 (DNA polymerase delta, subunit 2) is an auxiliary subunit of the eukaryotic DNA polymerase delta (PolD) complex thought to play a regulatory role and to serve as a scaffold for PolD assembly by interacting simultaneously with all of the other three subunits. PolD2 is catalytically inactive and lacks the active site residues required for phosphoesterase activity in other members of this superfamily. PolD2 is also involved in the recruitment of several proteins regulating DNA metabolism, including p21, PDIP1, PDIP38, PDIP46, and WRN. Human PolD consists of four subunits: p125 (PolD1), p50 (PolD2), p66(PolD3), and p12(PolD4). PolD is one of three major replicases in eukaryotes. PolD also plays an essential role in translesion DNA synthesis, homologous recombination, and DNA repair. Within the PolD complex, PolD2 tightly associates with PolD3. PolD2 belongs to the metallophosphatase (MPP) superfamily
Probab=96.31 E-value=0.1 Score=46.70 Aligned_cols=50 Identities=16% Similarity=0.159 Sum_probs=33.1
Q ss_pred eEEEeeceeeecceEEec--CCeeEEEEecCCccccCCCcEEEEEEc-CCCCeEEEEE
Q 023226 211 KLIARAHQLVMEGYNWGH--EQKVVTIFSAPNYCYRCGNMASILEVD-DCKGHTFIQF 265 (285)
Q Consensus 211 ~~iirgH~~~~~G~~~~~--~~~~itifSa~~y~~~~~n~~a~l~i~-~~~~~~~~~~ 265 (285)
++++.|||+. -|..... +++-+.+.|.|.|.. .|.+..+| ++++++.++|
T Consensus 205 hVyf~Gnq~~-f~t~~~~~~~~~~v~lv~vP~Fs~----t~~~vlvdl~tLe~~~v~f 257 (257)
T cd07387 205 HVYFAGNQPK-FGTKLVEGEEGQRVLLVCVPSFSK----TGTAVLVNLRTLECEPISF 257 (257)
T ss_pred CEEEeCCCcc-eeeeEEEcCCCCeEEEEEeCCcCc----CCEEEEEECCcCcEEEEeC
Confidence 6788999986 4444432 366778888899853 45555555 5677777654
No 91
>COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair]
Probab=96.30 E-value=0.0092 Score=56.50 Aligned_cols=72 Identities=24% Similarity=0.257 Sum_probs=50.2
Q ss_pred CcEEEEecCCCC-------------HHHHHHHHHhcCCCCCCcEEEeCCccCCCCChHHHHHHH----HhccccCCCcEE
Q 023226 26 SPVTICGDIHGQ-------------FHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLL----VSLKVRYPQRIT 88 (285)
Q Consensus 26 ~~i~vvGDiHG~-------------~~~l~~il~~~~~~~~~~~vflGD~vDrG~~s~evl~~l----~~lk~~~p~~v~ 88 (285)
+|+..++|.|=- +.+|..+++.+.....+-+|+-||+.|+..-|.+++..+ ..|+.. .--|+
T Consensus 1 mkilHtSD~HLG~~~~~~~~r~~d~~~~f~~~l~~a~~~~vD~vliAGDlFd~~~Ps~~a~~~~~~~l~~l~~~-~Ipv~ 79 (390)
T COG0420 1 MKILHTSDWHLGSKQLNLPSRLEDQKKAFDELLEIAKEEKVDFVLIAGDLFDTNNPSPRALKLFLEALRRLKDA-GIPVV 79 (390)
T ss_pred CeeEEecccccchhhccCccchHHHHHHHHHHHHHHHHccCCEEEEccccccCCCCCHHHHHHHHHHHHHhccC-CCcEE
Confidence 578889999944 345556666665556677889999999988777655443 334321 11399
Q ss_pred EeCCCchhhh
Q 023226 89 ILRGNHESRQ 98 (285)
Q Consensus 89 ~lrGNHE~~~ 98 (285)
+|.||||...
T Consensus 80 ~I~GNHD~~~ 89 (390)
T COG0420 80 VIAGNHDSPS 89 (390)
T ss_pred EecCCCCchh
Confidence 9999999864
No 92
>PLN02533 probable purple acid phosphatase
Probab=96.29 E-value=0.0055 Score=58.90 Aligned_cols=71 Identities=18% Similarity=0.253 Sum_probs=41.7
Q ss_pred CCcEEEEecCCCCHHHHHHHHHhcCCCCCCcEEEeCCccCCCCChH---HHHHHHHhccccCCCcEEEeCCCchhhh
Q 023226 25 KSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSV---ETVTLLVSLKVRYPQRITILRGNHESRQ 98 (285)
Q Consensus 25 ~~~i~vvGDiHG~~~~l~~il~~~~~~~~~~~vflGD~vDrG~~s~---evl~~l~~lk~~~p~~v~~lrGNHE~~~ 98 (285)
.-+++++||+|-. ......++.+.....+-+|++||+++-+...- +-..++..+....| ++.+.||||...
T Consensus 139 ~~~f~v~GDlG~~-~~~~~tl~~i~~~~pD~vl~~GDl~y~~~~~~~wd~f~~~i~~l~s~~P--~m~~~GNHE~~~ 212 (427)
T PLN02533 139 PIKFAVSGDLGTS-EWTKSTLEHVSKWDYDVFILPGDLSYANFYQPLWDTFGRLVQPLASQRP--WMVTHGNHELEK 212 (427)
T ss_pred CeEEEEEEeCCCC-cccHHHHHHHHhcCCCEEEEcCccccccchHHHHHHHHHHhhhHhhcCc--eEEeCccccccc
Confidence 4579999999632 22223334333344566778999997543321 12233333333445 889999999753
No 93
>cd07408 MPP_SA0022_N Staphylococcus aureus SA0022 and related proteins, N-terminal metallophosphatase domain. SA0022 is an uncharacterized Staphylococcus aureus UshA-like protein with two putative domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. SA0022 also contains a putative C-terminal cell wall anchor domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet
Probab=95.82 E-value=0.017 Score=51.46 Aligned_cols=65 Identities=22% Similarity=0.246 Sum_probs=41.9
Q ss_pred cEEEEecCCCCH----------HHHHHHHHhcCCCCCCcEEEeCCccCCCCCh-----HHHHHHHHhccccCCCcEEEeC
Q 023226 27 PVTICGDIHGQF----------HDLAELFRIGGKCPDTNYLFMGDYVDRGYYS-----VETVTLLVSLKVRYPQRITILR 91 (285)
Q Consensus 27 ~i~vvGDiHG~~----------~~l~~il~~~~~~~~~~~vflGD~vDrG~~s-----~evl~~l~~lk~~~p~~v~~lr 91 (285)
+++-++|+||++ ..+..+++.....+..-++..||.++..+.+ ..++..+.++.. .+ ...
T Consensus 2 ~il~~~D~H~~~~~~~~~~~g~~~l~~~i~~~~~~~~~l~l~~GD~~~gs~~~~~~~g~~~~~~ln~~g~----d~-~~~ 76 (257)
T cd07408 2 TILHTNDIHGRIDEDDNNGIGYAKLATYKKEMNKLDNDLLVDAGDAIQGLPISDLDKGETIIKIMNAVGY----DA-VTP 76 (257)
T ss_pred EEEEeccCcccccCCCCccccHHHHHHHHHHHHhcCCEEEEeCCCcCCCchhhhhcCCcHHHHHHHhcCC----cE-Ecc
Confidence 578899999974 4566666665433444555699999876533 345555555542 24 456
Q ss_pred CCchh
Q 023226 92 GNHES 96 (285)
Q Consensus 92 GNHE~ 96 (285)
||||.
T Consensus 77 GNHef 81 (257)
T cd07408 77 GNHEF 81 (257)
T ss_pred ccccc
Confidence 99995
No 94
>cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain. Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site ma
Probab=95.56 E-value=0.032 Score=49.92 Aligned_cols=69 Identities=23% Similarity=0.267 Sum_probs=38.9
Q ss_pred cEEEEecCCCC--H--HHHHHHHH-hcCCCCCCcEEEeCCcc-CCCCCh------HHHHHHHHh-ccccCCCcEEEeCCC
Q 023226 27 PVTICGDIHGQ--F--HDLAELFR-IGGKCPDTNYLFMGDYV-DRGYYS------VETVTLLVS-LKVRYPQRITILRGN 93 (285)
Q Consensus 27 ~i~vvGDiHG~--~--~~l~~il~-~~~~~~~~~~vflGD~v-DrG~~s------~evl~~l~~-lk~~~p~~v~~lrGN 93 (285)
+++++||.=.. . .++.+.+. .+.....+-+|++||++ +-|..+ .+.+..++. +....| ++.+.||
T Consensus 2 ~f~~~gD~g~~~~~~~~~~~~~~~~~~~~~~~dfvv~~GD~~y~~g~~~~~~~~~~~~~~~~~~~~~~~~P--~~~v~GN 79 (277)
T cd07378 2 RFLALGDWGGGGTAGQKAVAKAMAKVAAELGPDFILSLGDNFYDDGVGSVDDPRFETTFEDVYSAPSLQVP--WYLVLGN 79 (277)
T ss_pred eEEEEeecCCCCCHHHHHHHHHHHHHHHhcCCCEEEeCCCccccCCCCCCcchHHHHHHHHHccchhhcCC--eEEecCC
Confidence 57899998764 2 23333333 23323446688999987 555321 122222222 222233 9999999
Q ss_pred chhh
Q 023226 94 HESR 97 (285)
Q Consensus 94 HE~~ 97 (285)
||..
T Consensus 80 HD~~ 83 (277)
T cd07378 80 HDYS 83 (277)
T ss_pred cccC
Confidence 9976
No 95
>KOG2863 consensus RNA lariat debranching enzyme [RNA processing and modification]
Probab=95.55 E-value=0.048 Score=50.49 Aligned_cols=62 Identities=24% Similarity=0.228 Sum_probs=40.5
Q ss_pred ccCHHHHHHHHHHCCCeEEEeeceeeecceEEecCCe-eEEEEecCCccccCCCcEEEEEEcC
Q 023226 195 TFGQDISEQFNHTNNLKLIARAHQLVMEGYNWGHEQK-VVTIFSAPNYCYRCGNMASILEVDD 256 (285)
Q Consensus 195 ~fg~~~~~~fl~~~~~~~iirgH~~~~~G~~~~~~~~-~itifSa~~y~~~~~n~~a~l~i~~ 256 (285)
..|..++.+.|+...-.+=+-+|-.+.---...++.+ -.|-|+|.+-|-..+|---+|.++.
T Consensus 204 ~LGSp~~~eLL~~LkP~yWfsAHLH~KFaA~v~H~~~~~~tkflaldKclp~~~flqile~~s 266 (456)
T KOG2863|consen 204 KLGSPALEELLEDLKPQYWFSAHLHVKFAALVQHNKRSHVTKFLALDKCLPNRNFLQILEIPS 266 (456)
T ss_pred CcCChHHHHHHHHhCcchhhhhhHhhHHhhhhcccCcCCCcccccccccCCCcchhhhccCCC
Confidence 3678899999999988888888887643323333332 4678888888755344334444443
No 96
>COG1407 Predicted ICC-like phosphoesterases [General function prediction only]
Probab=95.47 E-value=0.046 Score=48.08 Aligned_cols=102 Identities=19% Similarity=0.240 Sum_probs=60.5
Q ss_pred cCCcEEEEecCCCCHHHH----------------HHHHH-hcCCCCCCcEEEeCCccCCCCC-----hHHHHHHHHhccc
Q 023226 24 VKSPVTICGDIHGQFHDL----------------AELFR-IGGKCPDTNYLFMGDYVDRGYY-----SVETVTLLVSLKV 81 (285)
Q Consensus 24 ~~~~i~vvGDiHG~~~~l----------------~~il~-~~~~~~~~~~vflGD~vDrG~~-----s~evl~~l~~lk~ 81 (285)
...+..|++|+|=-+... .+.+. .+.....+++|++||+-.-.+. ..++-.++..++.
T Consensus 18 ~~~~~lVvADlHlG~e~~~~r~Gi~lP~~~~~~~~~~l~~ii~~~~p~~lIilGD~KH~~~~~~~~e~~~~~~f~~~~~~ 97 (235)
T COG1407 18 PLGRTLVVADLHLGYEESLARRGINLPRYQTDRILKRLDRIIERYGPKRLIILGDLKHEFGKSLRQEKEEVREFLELLDE 97 (235)
T ss_pred ccCcEEEEEecccchhHHHHhcCcccCchhHHHHHHHHHHHHHhcCCCEEEEcCccccccCccccccHHHHHHHHHHhcc
Confidence 357899999999655432 22332 1223345789999999644332 3555555555554
Q ss_pred cCCCcEEEeCCCchhhhhhhhhCChHHHHHHhCChhHHHHHHHHHhhCCceeEEeceEEEecCCCCCC
Q 023226 82 RYPQRITILRGNHESRQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALVESEIFCLHGGLSPS 149 (285)
Q Consensus 82 ~~p~~v~~lrGNHE~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~l~vHgGi~~~ 149 (285)
. .+.+++||||...-.-..++. ...++.. . -++++++||=-.+.
T Consensus 98 ~---evi~i~GNHD~~i~~~~~~~~-------------------v~v~~~~-~-i~~~~~~HGh~~~~ 141 (235)
T COG1407 98 R---EVIIIRGNHDNGIEEILPGFN-------------------VEVVDEL-E-IGGLLFRHGHKEPE 141 (235)
T ss_pred C---cEEEEeccCCCccccccccCC-------------------ceeeeeE-E-ecCEEEEeCCCCCc
Confidence 3 499999999975433323320 1112223 2 37899999876444
No 97
>cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain. Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but
Probab=95.47 E-value=0.37 Score=43.59 Aligned_cols=61 Identities=23% Similarity=0.242 Sum_probs=36.6
Q ss_pred HHHHHHHHhcCCC--CCCcEEEeCCccCCCCChH--H------HHHHHHhccccCCC-cEEEeCCCchhhhh
Q 023226 39 HDLAELFRIGGKC--PDTNYLFMGDYVDRGYYSV--E------TVTLLVSLKVRYPQ-RITILRGNHESRQI 99 (285)
Q Consensus 39 ~~l~~il~~~~~~--~~~~~vflGD~vDrG~~s~--e------vl~~l~~lk~~~p~-~v~~lrGNHE~~~~ 99 (285)
..+..+++.+... +.+-+|+.||+++.+.... + .-.+...++..+|. -|+.+.||||....
T Consensus 53 ~l~~s~l~~i~~~~~~~dfii~tGD~v~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~~pv~~~~GNHD~~p~ 124 (296)
T cd00842 53 RLVESALEAIKKNHPKPDFILWTGDLVRHDVDEQTPETLVLISISNLTSLLKKAFPDTPVYPALGNHDSYPV 124 (296)
T ss_pred HHHHHHHHHHHHhCCCCCEEEEcCCCCCCCchhhchhHHHHHHHHHHHHHHHHhCCCCCEEEcCCCCCCCcc
Confidence 4556666654333 5566889999998876421 1 12222333333332 49999999998643
No 98
>cd08164 MPP_Ted1 Saccharomyces cerevisiae Ted1 and related proteins, metallophosphatase domain. Saccharomyces cerevisiae Ted1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1) is a metallophosphatase domain-containing protein which acts together with Emp24p and Erv25p in cargo exit from the ER. Ted1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the
Probab=95.46 E-value=0.027 Score=48.20 Aligned_cols=64 Identities=16% Similarity=0.219 Sum_probs=38.8
Q ss_pred cCCCCHHHHHHHHHhcCC-CCCCcEEEeCCccCCCCChHH-HHHHHHhccccC---------------------CCcEEE
Q 023226 33 DIHGQFHDLAELFRIGGK-CPDTNYLFMGDYVDRGYYSVE-TVTLLVSLKVRY---------------------PQRITI 89 (285)
Q Consensus 33 DiHG~~~~l~~il~~~~~-~~~~~~vflGD~vDrG~~s~e-vl~~l~~lk~~~---------------------p~~v~~ 89 (285)
|++|+=.=|.++++.+.. -..+.++||||++|.|--+-+ -.....+.+..+ .-.+++
T Consensus 24 d~~~~D~YL~~~~~~~~~~l~Pd~V~fLGDLfd~~w~~D~ef~~~~~RF~~if~~~~~~~~~~~~~~~~~~~~~~i~~i~ 103 (193)
T cd08164 24 DLFGNDYFLGHIVSMMQFWLKPDAVVVLGDLFSSQWIDDEEFAKRADRYRRRFFGRNDWQVGNISLAARTFEDGKTPLIN 103 (193)
T ss_pred hhhhhHHHHHHHHHHHHHhcCCCEEEEeccccCCCcccHHHHHHHHHHHHHHhcCCcccccccccccccccccCCceEEE
Confidence 556666667777766532 344668899999998753322 222233332221 135789
Q ss_pred eCCCchh
Q 023226 90 LRGNHES 96 (285)
Q Consensus 90 lrGNHE~ 96 (285)
|+||||.
T Consensus 104 V~GNHDI 110 (193)
T cd08164 104 IAGNHDV 110 (193)
T ss_pred ECCcccC
Confidence 9999996
No 99
>cd07412 MPP_YhcR_N Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain. YhcR is a Bacillus subtilis sugar-nonspecific endonuclease. It cleaves endonucleolytically to yield nucleotide 3'-monophosphate products, similar to Staphylococcus aureus micrococcal nuclease. YhcR appears to be located in the cell wall, and is thought to be a substrate for a Bacillus subtilis sortase. YhcR is the major calcium-activated nuclease of B. subtilis. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated wi
Probab=95.34 E-value=0.032 Score=50.69 Aligned_cols=66 Identities=24% Similarity=0.367 Sum_probs=43.2
Q ss_pred cEEEEecCCCCHH--------------HHHHHHHhcCCC-CCCcEEEeCCccCCCCC-h-----HHHHHHHHhccccCCC
Q 023226 27 PVTICGDIHGQFH--------------DLAELFRIGGKC-PDTNYLFMGDYVDRGYY-S-----VETVTLLVSLKVRYPQ 85 (285)
Q Consensus 27 ~i~vvGDiHG~~~--------------~l~~il~~~~~~-~~~~~vflGD~vDrG~~-s-----~evl~~l~~lk~~~p~ 85 (285)
+|+.+.|+||++. .+..+++..... +..-++..||++...+. + ..++..+.++...
T Consensus 2 ~il~tnD~Hg~~~~~~~~~~~~~gG~arl~~~i~~~r~~~~~~l~ld~GD~~~gs~~~s~~~~g~~~~~~~n~~g~D--- 78 (288)
T cd07412 2 QILAINDFHGRLEPPGKVVTVPAGGAAYLAAYLDEARAQNPNSLFVSAGDLIGASPFESALLQDEPTIEALNAMGVD--- 78 (288)
T ss_pred eEEEEeccccCccCCCCccccccccHHHHHHHHHHHHhcCCCeEEEeCCcccccccchhhcccCCcHHHHHHhhCCe---
Confidence 5788999999854 366666665433 33345569999976653 2 2466777666542
Q ss_pred cEEEeCCCchhh
Q 023226 86 RITILRGNHESR 97 (285)
Q Consensus 86 ~v~~lrGNHE~~ 97 (285)
+ +..||||.-
T Consensus 79 -a-~t~GNHefd 88 (288)
T cd07412 79 -A-SAVGNHEFD 88 (288)
T ss_pred -e-eeecccccc
Confidence 3 555999953
No 100
>COG1768 Predicted phosphohydrolase [General function prediction only]
Probab=95.03 E-value=0.052 Score=45.72 Aligned_cols=44 Identities=27% Similarity=0.360 Sum_probs=31.3
Q ss_pred CCCCcEEEeCCcc--CCCCChHHHHHHHHhccccCCCcEEEeCCCchhhh
Q 023226 51 CPDTNYLFMGDYV--DRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQ 98 (285)
Q Consensus 51 ~~~~~~vflGD~v--DrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~ 98 (285)
.+++.++.-||+- -|=+...+-+.+|-+| |+.-+++|||||.+.
T Consensus 42 ~~eDiVllpGDiSWaM~l~ea~~Dl~~i~~L----PG~K~m~rGNHDYWw 87 (230)
T COG1768 42 SPEDIVLLPGDISWAMRLEEAEEDLRFIGDL----PGTKYMIRGNHDYWW 87 (230)
T ss_pred ChhhEEEecccchhheechhhhhhhhhhhcC----CCcEEEEecCCcccc
Confidence 4566677899973 3444455566666665 677899999999875
No 101
>cd07409 MPP_CD73_N CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain. CD73 is a mammalian ecto-5'-nucleotidase expressed in endothelial cells and lymphocytes that catalyzes the conversion of 5'-AMP to adenosine in the final step of a pathway that generates adenosine from ATP. This pathway also includes a CD39 nucleoside triphosphate dephosphorylase that mediates the dephosphorylation of ATP to ADP and then to 5'-AMP. These enzymes all have an N-terminal metallophosphatase domain and a C-terminal 5'nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active si
Probab=94.56 E-value=0.095 Score=47.42 Aligned_cols=65 Identities=20% Similarity=0.217 Sum_probs=39.8
Q ss_pred cEEEEecCCCCH---------------------HHHHHHHHhcCCCCCCc-EEEeCCccCCCCC-----hHHHHHHHHhc
Q 023226 27 PVTICGDIHGQF---------------------HDLAELFRIGGKCPDTN-YLFMGDYVDRGYY-----SVETVTLLVSL 79 (285)
Q Consensus 27 ~i~vvGDiHG~~---------------------~~l~~il~~~~~~~~~~-~vflGD~vDrG~~-----s~evl~~l~~l 79 (285)
+++-++|+||++ ..+..+++.......+. ++..||.+...+. ...++..+.++
T Consensus 2 ~il~tnD~Hg~l~~~~~~~~~~~~~~~~~~gG~ar~~~~v~~~r~~~~~~l~ld~GD~~~gs~~~~~~~g~~~~~~ln~~ 81 (281)
T cd07409 2 TILHTNDHHSRFEETNPSGGVKDAATEKCYGGFARVATLVKELRAENPNVLFLNAGDAFQGTLWYTLYKGNADAEFMNLL 81 (281)
T ss_pred EEEEeccccccccccCccccccccccccccCCHHHHHHHHHHHHhcCCCEEEEeCCCCCCCcchhhhcCChHHHHHHHhc
Confidence 477889999874 44555666543322333 4448999987653 34455666555
Q ss_pred cccCCCcEEEeCCCchh
Q 023226 80 KVRYPQRITILRGNHES 96 (285)
Q Consensus 80 k~~~p~~v~~lrGNHE~ 96 (285)
... +. ..||||.
T Consensus 82 g~D----~~-~lGNHef 93 (281)
T cd07409 82 GYD----AM-TLGNHEF 93 (281)
T ss_pred CCC----EE-Eeccccc
Confidence 432 44 4599995
No 102
>cd07411 MPP_SoxB_N Thermus thermophilus SoxB and related proteins, N-terminal metallophosphatase domain. SoxB (sulfur oxidation protein B) is a periplasmic thiosulfohydrolase and an essential component of the sulfur oxidation pathway in archaea and bacteria. SoxB has a dinuclear manganese cluster and is thought to catalyze the release of sulfate from a protein-bound cysteine S-thiosulfonate. SoxB is expressed from the sox (sulfur oxidation) gene cluster, which encodes 15 other sox genes, and has two domains, an N-terminal metallophosphatase domain and a C-terminal 5'-nucleotidase domain. SoxB binds the SoxYZ complex and is thought to function as a sulfate-thiohydrolase. SoxB is closely related to the UshA, YchR, and CpdB proteins, all of which have the same two-domain architecture. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzy
Probab=94.33 E-value=0.087 Score=47.14 Aligned_cols=64 Identities=23% Similarity=0.203 Sum_probs=38.5
Q ss_pred cEEEEecCCCCH----------------------HHHHHHHHhcCCC-CCCcE-EEeCCccCCCCCh-----HHHHHHHH
Q 023226 27 PVTICGDIHGQF----------------------HDLAELFRIGGKC-PDTNY-LFMGDYVDRGYYS-----VETVTLLV 77 (285)
Q Consensus 27 ~i~vvGDiHG~~----------------------~~l~~il~~~~~~-~~~~~-vflGD~vDrG~~s-----~evl~~l~ 77 (285)
.++.++|+||++ ..+..+++..... ..+.+ +..||+++..+.+ ..++..+.
T Consensus 2 ~il~t~D~Hg~~~~~~~~~~~~~~~~~~~~~gG~~r~~~~v~~~~~~~~~~~l~l~~GD~~~gs~~~~~~~g~~~~~~l~ 81 (264)
T cd07411 2 TLLHINDLHGQLIPHYELEPSNLLARVFGMAGGFAHIATLIKRIRAERNPNTLLLDGGDTWQGSGEALYTRGQAMVDALN 81 (264)
T ss_pred EEEEEcccccCccccccccccccccccccccCcHHHHHHHHHHHHHhcCCCeEEEeCCCccCCChHHhhcCChhHHHHHH
Confidence 467788999974 3345555554333 33334 4599999876543 34556665
Q ss_pred hccccCCCcEEEeCCCchh
Q 023226 78 SLKVRYPQRITILRGNHES 96 (285)
Q Consensus 78 ~lk~~~p~~v~~lrGNHE~ 96 (285)
++.. -.+. ||||.
T Consensus 82 ~~g~-----da~~-GNHef 94 (264)
T cd07411 82 ALGV-----DAMV-GHWEF 94 (264)
T ss_pred hhCC-----eEEe-ccccc
Confidence 5432 2334 99995
No 103
>COG1311 HYS2 Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B [DNA replication, recombination, and repair]
Probab=93.97 E-value=2.4 Score=40.99 Aligned_cols=52 Identities=8% Similarity=0.063 Sum_probs=34.4
Q ss_pred eEEEeeceeeecceEEecCCeeEEEEecCCccccCCCcEEEEEEcC-CCCeEEEEEec
Q 023226 211 KLIARAHQLVMEGYNWGHEQKVVTIFSAPNYCYRCGNMASILEVDD-CKGHTFIQFEP 267 (285)
Q Consensus 211 ~~iirgH~~~~~G~~~~~~~~~itifSa~~y~~~~~n~~a~l~i~~-~~~~~~~~~~~ 267 (285)
++++.||++. .|+....+.+++..++-+.+.. .+-++-|+. .+.+.+..+..
T Consensus 420 Dv~~~Ghvh~-~g~~~y~gv~~vns~T~q~qTe----fqk~vni~p~~~~v~vv~~~~ 472 (481)
T COG1311 420 DVFHTGHVHK-FGTGVYEGVNLVNSGTWQEQTE----FQKMVNINPTPGNVPVVDFDS 472 (481)
T ss_pred cEEEEccccc-cceeEEeccceEEeeeecchhc----cceEEEecCcccceeEEeccc
Confidence 6789999997 7887777778888888777542 344555553 24444555444
No 104
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=93.02 E-value=0.15 Score=55.09 Aligned_cols=66 Identities=18% Similarity=0.236 Sum_probs=43.4
Q ss_pred CcEEEEecCCCCH---HHHHHHHHhcCCCCCCcEEE-eCCccCCCCCh-----HHHHHHHHhccccCCCcEEEeCCCchh
Q 023226 26 SPVTICGDIHGQF---HDLAELFRIGGKCPDTNYLF-MGDYVDRGYYS-----VETVTLLVSLKVRYPQRITILRGNHES 96 (285)
Q Consensus 26 ~~i~vvGDiHG~~---~~l~~il~~~~~~~~~~~vf-lGD~vDrG~~s-----~evl~~l~~lk~~~p~~v~~lrGNHE~ 96 (285)
.+|+.++|+||.+ ..+..+++.......+.+++ .||+++..+.+ ..++..+.++.. -....||||.
T Consensus 661 l~Il~~nD~Hg~l~g~~r~~~~i~~~r~~~~~~l~ld~GD~~~gs~~~~~~~g~~~~~~ln~lg~-----d~~~~GNHEf 735 (1163)
T PRK09419 661 LTILHTNDFHGHLDGAAKRVTKIKEVKEENPNTILVDAGDVYQGSLYSNLLKGLPVLKMMKEMGY-----DASTFGNHEF 735 (1163)
T ss_pred EEEEEEeecccCCCCHHHHHHHHHHHHhhCCCeEEEecCCCCCCcchhhhcCChHHHHHHhCcCC-----CEEEeccccc
Confidence 3688999999985 45555565543323344444 89999877644 346666666543 3468999995
No 105
>TIGR00282 metallophosphoesterase, MG_246/BB_0505 family. A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase.
Probab=92.78 E-value=0.29 Score=44.11 Aligned_cols=67 Identities=15% Similarity=0.112 Sum_probs=49.1
Q ss_pred CcEEEEecCCCC--HHHHHHHHHhcCCCCC-CcEEEeCCccCCC-CChHHHHHHHHhccccCCCcEEEeCCCchhh
Q 023226 26 SPVTICGDIHGQ--FHDLAELFRIGGKCPD-TNYLFMGDYVDRG-YYSVETVTLLVSLKVRYPQRITILRGNHESR 97 (285)
Q Consensus 26 ~~i~vvGDiHG~--~~~l~~il~~~~~~~~-~~~vflGD~vDrG-~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~ 97 (285)
++|.++|||=|. ...+...|..+..... +-+|..||....| .-+.++...|..+-.. ++.+ |||+.-
T Consensus 1 m~ilfiGDi~G~~Gr~~l~~~L~~lk~~~~~D~vIaNgEn~~gG~Gi~~~~~~~L~~~GvD----viT~-GNH~~D 71 (266)
T TIGR00282 1 IKFLFIGDVYGKAGRKIVKNNLPQLKSKYQADLVIANGENTTHGKGLTLKIYEFLKQSGVN----YITM-GNHTWF 71 (266)
T ss_pred CeEEEEEecCCHHHHHHHHHHHHHHHHhCCCCEEEEcCcccCCCCCCCHHHHHHHHhcCCC----EEEc-cchhcc
Confidence 589999999999 4567777776654433 4444589998765 4578899999887653 6666 999964
No 106
>KOG1378 consensus Purple acid phosphatase [Carbohydrate transport and metabolism]
Probab=92.67 E-value=0.19 Score=48.22 Aligned_cols=34 Identities=9% Similarity=-0.036 Sum_probs=27.1
Q ss_pred HHHHHHHHHCCCeEEEeeceeeecceEEecCCee
Q 023226 199 DISEQFNHTNNLKLIARAHQLVMEGYNWGHEQKV 232 (285)
Q Consensus 199 ~~~~~fl~~~~~~~iirgH~~~~~G~~~~~~~~~ 232 (285)
..++.++-++++++++-||...-+.+....+.++
T Consensus 322 ~~LE~l~~~~~VDvvf~GHvH~YER~~piyn~~~ 355 (452)
T KOG1378|consen 322 EGLEPLFVKYKVDVVFWGHVHRYERFCPIYNNTC 355 (452)
T ss_pred HHHHHHHHHhceeEEEeccceehhccchhhccee
Confidence 3689999999999999999987777655555544
No 107
>cd07406 MPP_CG11883_N Drosophila melanogaster CG11883 and related proteins, N-terminal metallophosphatase domain. CG11883 is an uncharacterized Drosophila melanogaster UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at th
Probab=92.61 E-value=0.25 Score=44.00 Aligned_cols=65 Identities=26% Similarity=0.233 Sum_probs=42.2
Q ss_pred cEEEEecCC----------CCHHHHHHHHHhcCCCCCC-cEEEeCCccCCCCC-----hHHHHHHHHhccccCCCcEEEe
Q 023226 27 PVTICGDIH----------GQFHDLAELFRIGGKCPDT-NYLFMGDYVDRGYY-----SVETVTLLVSLKVRYPQRITIL 90 (285)
Q Consensus 27 ~i~vvGDiH----------G~~~~l~~il~~~~~~~~~-~~vflGD~vDrG~~-----s~evl~~l~~lk~~~p~~v~~l 90 (285)
++.-+.|+| |.+..+..++++......+ -++..||+++..+. ...++..+.++.. -+..
T Consensus 2 ~il~~nd~~~~~~~~~~~~gG~~rl~~~i~~~r~~~~~~l~l~~GD~~~g~~~~~~~~g~~~~~~l~~l~~-----d~~~ 76 (257)
T cd07406 2 TILHFNDVYEIAPLDGGPVGGAARFATLRKQLRKENPNTLVLFSGDVLSPSLLSTATKGKQMVPVLNALGV-----DLAC 76 (257)
T ss_pred eEEEEccceeecccCCCCcCCHHHHHHHHHHHHhcCCCEEEEECCCccCCccchhhcCCccHHHHHHhcCC-----cEEe
Confidence 355566777 3467777777765443333 45569999987653 2456777766652 3456
Q ss_pred CCCchh
Q 023226 91 RGNHES 96 (285)
Q Consensus 91 rGNHE~ 96 (285)
.||||.
T Consensus 77 ~GNHef 82 (257)
T cd07406 77 FGNHEF 82 (257)
T ss_pred eccccc
Confidence 899995
No 108
>KOG3662 consensus Cell division control protein/predicted DNA repair exonuclease [Replication, recombination and repair]
Probab=92.26 E-value=0.23 Score=47.19 Aligned_cols=72 Identities=19% Similarity=0.349 Sum_probs=43.9
Q ss_pred CCcEEEEecCC--C---------CHH------HHHHHHHhcCCC-CCCcEEEeCCccCCCCCh--HHHHHHHHhccccCC
Q 023226 25 KSPVTICGDIH--G---------QFH------DLAELFRIGGKC-PDTNYLFMGDYVDRGYYS--VETVTLLVSLKVRYP 84 (285)
Q Consensus 25 ~~~i~vvGDiH--G---------~~~------~l~~il~~~~~~-~~~~~vflGD~vDrG~~s--~evl~~l~~lk~~~p 84 (285)
..++..|+|-| | -++ -|.+.++..-.. ..+-++||||++|-|+.. -|--....+++..+|
T Consensus 48 ~~ki~~vaDPQilg~~~~~~~~~~Ldk~~~D~~lrr~f~~~~~~lkPdvvffLGDLfDeG~~~~~eEf~~~~~RfkkIf~ 127 (410)
T KOG3662|consen 48 STKILLVADPQILGNWPKKFLVSWLDKYGNDWYLRRSFDMSQWRLKPDVVFFLGDLFDEGQWAGDEEFKKRYERFKKIFG 127 (410)
T ss_pred ceEEEEecCchhcCCCCCccccchHHhhhhHHHHHHHHHHHHhccCCCEEEEeccccccCccCChHHHHHHHHHHHHhhC
Confidence 34788888876 3 112 223444433222 334566899999988753 334444555555554
Q ss_pred C----cEEEeCCCchh
Q 023226 85 Q----RITILRGNHES 96 (285)
Q Consensus 85 ~----~v~~lrGNHE~ 96 (285)
. .+..+.||||-
T Consensus 128 ~k~~~~~~~i~GNhDI 143 (410)
T KOG3662|consen 128 RKGNIKVIYIAGNHDI 143 (410)
T ss_pred CCCCCeeEEeCCcccc
Confidence 3 68899999995
No 109
>cd07405 MPP_UshA_N Escherichia coli UshA and related proteins, N-terminal metallophosphatase domain. UshA is a bacterial periplasmic enzyme with UDP-sugar hydrolase and dinucleoside-polyphosphate hydrolase activities associated with its N-terminal metallophosphatase domain, and 5'-nucleotidase activity associated with its C-terminal domain. UshA has been studied in Escherichia coli where it is expressed from the ushA gene as an immature precursor and proteolytically cleaved to form a mature product upon export to the periplasm. UshA hydrolyzes many different nucleotides and nucleotide derivitives and has been shown to degrade external UDP-glucose to uridine, glucose 1-phosphate and phosphate for utilization by the cell. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs
Probab=92.02 E-value=0.21 Score=45.30 Aligned_cols=66 Identities=18% Similarity=0.044 Sum_probs=38.2
Q ss_pred cEEEEecCCCCHH----------HHHHHHHhcCC-----CCCCcEEEeCCccCCCCC-----hHHHHHHHHhccccCCCc
Q 023226 27 PVTICGDIHGQFH----------DLAELFRIGGK-----CPDTNYLFMGDYVDRGYY-----SVETVTLLVSLKVRYPQR 86 (285)
Q Consensus 27 ~i~vvGDiHG~~~----------~l~~il~~~~~-----~~~~~~vflGD~vDrG~~-----s~evl~~l~~lk~~~p~~ 86 (285)
.|+.+.|+||++. .+..+++.... .+..-++-.||.+...+. ...++.++.++...
T Consensus 2 tIl~tnD~Hg~l~~~~~~~gG~ar~a~~i~~~r~~~~~~~~~~l~ld~GD~~~Gs~~~~~~~g~~~~~~~n~~g~D---- 77 (285)
T cd07405 2 TILHTNDHHGHFWPNGTGEYGLAAQKTLVDGVRREVAAQGGYVLLLSGGDINTGVPESDLQDAEPDFRGMNLVGYD---- 77 (285)
T ss_pred EEEEEcccccccccCCCCCccHHHHHHHHHHHHHHhhccCCCEEEEeCCCcCCCchhHHhcCcchHHHHHHhhCCc----
Confidence 4788899999853 24455544321 223334449999843332 23455666666543
Q ss_pred EEEeCCCchhh
Q 023226 87 ITILRGNHESR 97 (285)
Q Consensus 87 v~~lrGNHE~~ 97 (285)
+. ..||||.-
T Consensus 78 a~-~~GNHEfD 87 (285)
T cd07405 78 AM-AVGNHEFD 87 (285)
T ss_pred EE-eecccccc
Confidence 44 44999953
No 110
>cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain. DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=90.30 E-value=0.82 Score=40.90 Aligned_cols=66 Identities=21% Similarity=0.193 Sum_probs=45.9
Q ss_pred cEEEEecCCCCHH--HHHHHHHhcCCCCC-CcEEEeCCccCCC-CChHHHHHHHHhccccCCCcEEEeCCCchhh
Q 023226 27 PVTICGDIHGQFH--DLAELFRIGGKCPD-TNYLFMGDYVDRG-YYSVETVTLLVSLKVRYPQRITILRGNHESR 97 (285)
Q Consensus 27 ~i~vvGDiHG~~~--~l~~il~~~~~~~~-~~~vflGD~vDrG-~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~ 97 (285)
++.++|||=|... .+...|........ +-+|-.||..--| .-+.++...|..+... +..+ ||||.-
T Consensus 1 ~ilfigdi~g~~G~~~~~~~l~~lk~~~~~D~vi~NgEn~~gg~gl~~~~~~~L~~~G~D----~iTl-GNH~fD 70 (255)
T cd07382 1 KILFIGDIVGKPGRKAVKEHLPKLKKEYKIDFVIANGENAAGGKGITPKIAKELLSAGVD----VITM-GNHTWD 70 (255)
T ss_pred CEEEEEeCCCHHHHHHHHHHHHHHHHHCCCCEEEECCccccCCCCCCHHHHHHHHhcCCC----EEEe-cccccC
Confidence 5889999999875 44566665543323 3344589988666 4678889999888754 5555 999853
No 111
>cd08162 MPP_PhoA_N Synechococcus sp. strain PCC 7942 PhoA and related proteins, N-terminal metallophosphatase domain. Synechococcus sp. strain PCC 7942 PhoA is a large atypical alkaline phosphatase. It is known to be transported across the inner cytoplasmic membrane and into the periplasmic space. In vivo inactivation of the gene encoding PhoA leads to a loss of extracellular, phosphate-regulated phosphatase activity, but does not appear to affect the cells capacity for phosphate uptake. PhoA may play a role in scavenging phosphate during growth of Synechococcus sp. strain PCC 7942 in its natural environment. PhoA belongs to a domain family which includes the bacterial enzyme UshA and several other related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly relat
Probab=89.59 E-value=0.59 Score=43.05 Aligned_cols=65 Identities=23% Similarity=0.240 Sum_probs=41.2
Q ss_pred cEEEEecCCCCHH------HHHHHHHhcCC-----CCCCcEEEeCCccCCCCC-------------hHHHHHHHHhcccc
Q 023226 27 PVTICGDIHGQFH------DLAELFRIGGK-----CPDTNYLFMGDYVDRGYY-------------SVETVTLLVSLKVR 82 (285)
Q Consensus 27 ~i~vvGDiHG~~~------~l~~il~~~~~-----~~~~~~vflGD~vDrG~~-------------s~evl~~l~~lk~~ 82 (285)
.|+-..|+||++. .+..+++.... .+..-++..||.+..++. ...+++++-++...
T Consensus 2 ~IlhtnD~Hg~~~~~gg~ar~a~~i~~~r~~~~~~~~~~l~ldaGD~~qGs~~~~~~~~~~~~~~~G~~~i~~mN~~g~D 81 (313)
T cd08162 2 QLLHTSDGESGLLAEDDAPNFSALVNALKDEAAAEYDNTLTLSSGDNFIPGPFFNASLDPLIYGDPGRADILILNALGVQ 81 (313)
T ss_pred eEEEecccccCccccCCHHHHHHHHHHHHHhhhccCCCeEEEecCccccCchhhhhhccccccccCChHHHHHHhccCCc
Confidence 4677899999953 44444554321 233345569998875442 34567777777643
Q ss_pred CCCcEEEeCCCchh
Q 023226 83 YPQRITILRGNHES 96 (285)
Q Consensus 83 ~p~~v~~lrGNHE~ 96 (285)
.+..||||.
T Consensus 82 -----a~tlGNHEF 90 (313)
T cd08162 82 -----AIALGNHEF 90 (313)
T ss_pred -----EEecccccc
Confidence 477899995
No 112
>COG0737 UshA 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism]
Probab=89.43 E-value=0.48 Score=46.66 Aligned_cols=68 Identities=26% Similarity=0.329 Sum_probs=44.5
Q ss_pred CCcEEEEecCCCCHH---------------HHHHHHHhcCCCCCCcEEE-eCCccCCCC------ChHHHHHHHHhcccc
Q 023226 25 KSPVTICGDIHGQFH---------------DLAELFRIGGKCPDTNYLF-MGDYVDRGY------YSVETVTLLVSLKVR 82 (285)
Q Consensus 25 ~~~i~vvGDiHG~~~---------------~l~~il~~~~~~~~~~~vf-lGD~vDrG~------~s~evl~~l~~lk~~ 82 (285)
+.+|+-..|+||++. ....++++........+++ .||+++..+ .....+.++-.++..
T Consensus 26 ~l~ilhtnD~H~~l~~~~~~~~~~~~~g~~~~~~~v~~~ra~~~~~llld~GD~~~G~~l~~~~~~g~~~~~~mN~m~yD 105 (517)
T COG0737 26 KLTILHTNDLHGHLEPYDYDDDGDTDGGLARIATLVKQLRAENKNVLLLDAGDLIQGSPLSDYLTKGEPTVDLLNALGYD 105 (517)
T ss_pred eEEEEEeccccccceeccccccCcccccHHHHHHHHHHHHhhcCCeEEEeCCcccCCccccccccCCChHHHHHhhcCCc
Confidence 457888999999998 3333344333222334444 999998843 345577777777643
Q ss_pred CCCcEEEeCCCchhh
Q 023226 83 YPQRITILRGNHESR 97 (285)
Q Consensus 83 ~p~~v~~lrGNHE~~ 97 (285)
..-.||||.-
T Consensus 106 -----a~tiGNHEFd 115 (517)
T COG0737 106 -----AMTLGNHEFD 115 (517)
T ss_pred -----EEeecccccc
Confidence 4677999964
No 113
>KOG3339 consensus Predicted glycosyltransferase [General function prediction only]
Probab=89.22 E-value=3.5 Score=35.03 Aligned_cols=85 Identities=19% Similarity=0.273 Sum_probs=63.4
Q ss_pred CcEEEeCCccCCCCChHHHHHHHHhccccCCCcEEEeCCCchhhhhhhhhCChH----------------HHHHHhCChh
Q 023226 54 TNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYD----------------ECLRKYGNAN 117 (285)
Q Consensus 54 ~~~vflGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~f~~----------------e~~~~~~~~~ 117 (285)
..+||+|- |.+.-|++.++..++..|-++-++ .|+-|.|..+....|.. |..+.| -..
T Consensus 40 ~~lVvlGS----GGHT~EMlrLl~~l~~~y~~r~yI-~a~tD~mS~~k~~~F~~~~a~~~a~~~~ipRsReVgQS~-ltS 113 (211)
T KOG3339|consen 40 STLVVLGS----GGHTGEMLRLLEALQDLYSPRSYI-AADTDEMSEQKARSFELSLAHCKAKNYEIPRSREVGQSW-LTS 113 (211)
T ss_pred eEEEEEcC----CCcHHHHHHHHHHHHhhcCceEEE-EecCchhhHHHHHhhhccccccchhheecchhhhhhhhh-hhh
Confidence 45888985 999999999999999998776655 89999999887655432 222222 135
Q ss_pred HHHHHHHHHhhCCceeEEeceEEEecC
Q 023226 118 VWKIFTDLFDYFPLTALVESEIFCLHG 144 (285)
Q Consensus 118 ~~~~~~~~~~~lP~~~~i~~~~l~vHg 144 (285)
++..+...+.++++...+-.+++.+.|
T Consensus 114 v~Tti~all~s~~lv~RirPdlil~NG 140 (211)
T KOG3339|consen 114 VFTTIWALLQSFVLVWRIRPDLILCNG 140 (211)
T ss_pred HHHHHHHHHHHheEEEecCCCEEEECC
Confidence 677778888888888877667777776
No 114
>KOG1432 consensus Predicted DNA repair exonuclease SIA1 [General function prediction only]
Probab=89.14 E-value=1.6 Score=40.43 Aligned_cols=34 Identities=12% Similarity=0.099 Sum_probs=22.9
Q ss_pred HHHHHHHHHHCCCeEEEeeceeeecceEEecCCee
Q 023226 198 QDISEQFNHTNNLKLIARAHQLVMEGYNWGHEQKV 232 (285)
Q Consensus 198 ~~~~~~fl~~~~~~~iirgH~~~~~G~~~~~~~~~ 232 (285)
...++.+-++.+++.++.||..+. -|.....+.+
T Consensus 288 sg~~~~L~~r~~Vk~vf~GHdHvN-DfC~~~k~~~ 321 (379)
T KOG1432|consen 288 SGFLTTLVNRGNVKGVFCGHDHVN-DFCGELKGEL 321 (379)
T ss_pred cHHHHHHHhccCcceEEecccccc-ceecccCCeE
Confidence 344555555889999999999984 3444444543
No 115
>cd07407 MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and related proteins, N-terminal metallophosphatase domain. YHR202W is an uncharacterized Saccharomyces cerevisiae UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at
Probab=88.97 E-value=0.53 Score=42.73 Aligned_cols=67 Identities=19% Similarity=0.131 Sum_probs=39.7
Q ss_pred CcEEEEecCCCCHH-------------HHHHHHHhc----CC-CCCCcEEEeCCccCCCCC-------hHHHHHHHHhcc
Q 023226 26 SPVTICGDIHGQFH-------------DLAELFRIG----GK-CPDTNYLFMGDYVDRGYY-------SVETVTLLVSLK 80 (285)
Q Consensus 26 ~~i~vvGDiHG~~~-------------~l~~il~~~----~~-~~~~~~vflGD~vDrG~~-------s~evl~~l~~lk 80 (285)
-+|+-+.|+||++. .+.++.+.. .. .+..-++..||.+..-+. ..-+++++-++.
T Consensus 6 ltILhtnD~Hg~l~~~~~~~~~~~~~gg~a~~i~~~~~~~~~~~~~~Llld~GD~~qGs~~~~~~~~~g~~~~~~mN~mg 85 (282)
T cd07407 6 INFLHTTDTHGWLGGHLNDPNYSADWGDFASFVEHMREKADQKGVDLLLVDTGDLHDGNGLSDASPPPGSYSNPIFRMMP 85 (282)
T ss_pred EEEEEEcccccCCcCcCCcccccCCHHHHHHHHHHHHHHHHhcCCCEEEEeCCCccCCeeceeeecCCChHHHHHHHhcC
Confidence 36888899999763 223333222 11 222334459999876443 233566666665
Q ss_pred ccCCCcEEEeCCCchhh
Q 023226 81 VRYPQRITILRGNHESR 97 (285)
Q Consensus 81 ~~~p~~v~~lrGNHE~~ 97 (285)
. -.+..||||.-
T Consensus 86 y-----Da~tlGNHEFd 97 (282)
T cd07407 86 Y-----DLLTIGNHELY 97 (282)
T ss_pred C-----cEEeecccccC
Confidence 3 45788999973
No 116
>KOG0918 consensus Selenium-binding protein [Inorganic ion transport and metabolism]
Probab=87.92 E-value=0.014 Score=54.56 Aligned_cols=193 Identities=11% Similarity=-0.081 Sum_probs=105.5
Q ss_pred CCcEEEeCCccCCCCChHHHHHHHHhccccCCCcEEEeCCCchhhhhhhhhCChHHHHHHhCC---hhHHHHHHHHHhhC
Q 023226 53 DTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGN---ANVWKIFTDLFDYF 129 (285)
Q Consensus 53 ~~~~vflGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~f~~e~~~~~~~---~~~~~~~~~~~~~l 129 (285)
.-..|+++++.+++-..++.+.+-...+..+-.+--.+++||+... ++.+++...-.. -.+++..++-++.+
T Consensus 48 ~latVdvdp~s~t~c~vI~r~~~~~~gdelhhsgwn~~ssc~~~~~-----~~R~~LVlp~l~S~riyvid~~~ep~~~~ 122 (476)
T KOG0918|consen 48 YLATVDVDPSSPTYCQVIHRLPMPYLGDELHHSGWNSCSSCHGDSS-----FKRRYLVLPSLNSGRIYVIDVKTEPRKPS 122 (476)
T ss_pred ceeEEecCCCCCcceeeEEEeccCcccchhcccchhhhhhhccCcc-----hhhhheeecccccCceEEEEeccCcCccc
Confidence 4457889999999999999988888888777677778999996542 222222211111 13455666777778
Q ss_pred CceeEEeceEEEecCCCCCCCCchhhhhhccccccCCCCCccccccccCCCC-----CCCCccCCCCCccccC--HHHHH
Q 023226 130 PLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDD-----RCGWGISPRGAGYTFG--QDISE 202 (285)
Q Consensus 130 P~~~~i~~~~l~vHgGi~~~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~-----~~~~~~~~rg~~~~fg--~~~~~ 202 (285)
+..++. +++++.||+..|.......+..+.-..-=..++ ..+. |-.+.+ ...|.... ..-.|| ....-
T Consensus 123 l~k~i~-~~il~~~~l~~Pht~hcla~g~v~vs~lGd~~g-n~kg-~f~llD~~~~~k~tw~~~~--~~p~~gyDfwyqp 197 (476)
T KOG0918|consen 123 LEKTID-PDILEKTGLACPHTSHCLASGNVMVSCLGDAEG-NAKG-GFLLLDSDFNEKGTWEKPG--HSPLFGYDFWYQP 197 (476)
T ss_pred eeeeec-hhhHhhcCCcCCcccccccCCCeeEEeeccccc-CCcC-CeEEecCccceecccccCC--Cccccccceeecc
Confidence 877664 599999999999865443332221100000000 0111 222221 12233221 111112 11222
Q ss_pred HHHHHCCCeEEEeeceeeecceEEecCCeeEEEEecCCccccCCCcEEEEEEcCC
Q 023226 203 QFNHTNNLKLIARAHQLVMEGYNWGHEQKVVTIFSAPNYCYRCGNMASILEVDDC 257 (285)
Q Consensus 203 ~fl~~~~~~~iirgH~~~~~G~~~~~~~~~itifSa~~y~~~~~n~~a~l~i~~~ 257 (285)
+++.....+...+.|.- .||...+=....+.++.+-|.-..++..+.|.+..+
T Consensus 198 r~~~mIstewgap~~~~--~gf~~~~v~d~lyg~~lhvy~w~~~~~~QtidL~~~ 250 (476)
T KOG0918|consen 198 RHNVMISTEWGAPNALR--KGFNPADVEDGLYGSHLHVYQWSPGELKQTIDLGDT 250 (476)
T ss_pred ccceEEeecccCchhhh--cCCChhHhhccceeeeeEEEecCCccceeEEecCCC
Confidence 23333344445555554 444443312226777777777666777788887765
No 117
>PRK09420 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; Reviewed
Probab=87.79 E-value=0.81 Score=46.43 Aligned_cols=68 Identities=18% Similarity=0.147 Sum_probs=43.7
Q ss_pred cCCcEEEEecCCCCHH----------------HHHHHHHhcCCC-CCCcEEEeCCccCCCCChH-------------HHH
Q 023226 24 VKSPVTICGDIHGQFH----------------DLAELFRIGGKC-PDTNYLFMGDYVDRGYYSV-------------ETV 73 (285)
Q Consensus 24 ~~~~i~vvGDiHG~~~----------------~l~~il~~~~~~-~~~~~vflGD~vDrG~~s~-------------evl 73 (285)
...+|+-..|+||++. .+..+++..... +..-+|-.||.+...+.+- .++
T Consensus 24 ~~L~IL~TnDlHg~l~~~dy~~~~~~~~~Glar~atli~~~R~e~~n~llvD~GD~~qGsp~~~~~~~~~~~~g~~~p~i 103 (649)
T PRK09420 24 VDLRIMETTDLHSNMMDFDYYKDKPTEKFGLVRTASLIKAARAEAKNSVLVDNGDLIQGSPLGDYMAAKGLKAGDVHPVY 103 (649)
T ss_pred ceEEEEEEcccccCccCCccccCCcccccCHHHHHHHHHHHHHhCCCEEEEECCCcCCCchhhhhhhhccccCCCcchHH
Confidence 3557888999999863 344455544322 3334455999987655421 366
Q ss_pred HHHHhccccCCCcEEEeCCCchh
Q 023226 74 TLLVSLKVRYPQRITILRGNHES 96 (285)
Q Consensus 74 ~~l~~lk~~~p~~v~~lrGNHE~ 96 (285)
..+-.|.. -....||||.
T Consensus 104 ~amN~lgy-----Da~tlGNHEF 121 (649)
T PRK09420 104 KAMNTLDY-----DVGNLGNHEF 121 (649)
T ss_pred HHHHhcCC-----cEEeccchhh
Confidence 77777653 3577899995
No 118
>PF04042 DNA_pol_E_B: DNA polymerase alpha/epsilon subunit B; InterPro: IPR007185 DNA polymerase epsilon is essential for cell viability and chromosomal DNA replication in budding yeast. In addition, DNA polymerase epsilon may be involved in DNA repair and cell-cycle checkpoint control. The enzyme consists of at least four subunits in mammalian cells as well as in yeast. The largest subunit of DNA polymerase epsilon is responsible for polymerase activity. In mouse, the DNA polymerase epsilon subunit B is the second largest subunit of the DNA polymerase. A part of the N-terminal was found to be responsible for the interaction with SAP18. Experimental evidence suggests that this subunit may recruit histone deacetylase to the replication fork to modify the chromatin structure [].; GO: 0003677 DNA binding, 0003887 DNA-directed DNA polymerase activity, 0006260 DNA replication; PDB: 3E0J_C 3FLO_G.
Probab=87.40 E-value=0.9 Score=38.85 Aligned_cols=72 Identities=11% Similarity=0.163 Sum_probs=39.5
Q ss_pred EEEEecCCCC-----HHHHHHHHHhcC-CCCCCcEEEeCCccCCCCChH----------HHHHHHHhcccc-----CCCc
Q 023226 28 VTICGDIHGQ-----FHDLAELFRIGG-KCPDTNYLFMGDYVDRGYYSV----------ETVTLLVSLKVR-----YPQR 86 (285)
Q Consensus 28 i~vvGDiHG~-----~~~l~~il~~~~-~~~~~~~vflGD~vDrG~~s~----------evl~~l~~lk~~-----~p~~ 86 (285)
|++++|+|=. ++.|.++|+... ....+.+|++|+++|.-.... .....+..+... .--+
T Consensus 1 Iv~~Sg~~~~~~~~~~~~L~~~l~~~~~~~~p~~lIl~G~fi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 80 (209)
T PF04042_consen 1 IVFASGPFLDSDNLSLEPLRDLLSGVEDASKPDVLILMGPFIDSPHPYISSGSVPDSYSFEEDFLKELDSFLESILPSTQ 80 (209)
T ss_dssp EEEEES--CTTT-HHHHHHHHHHHCCCHCTTECEEEEES-SCBTTSHHHHHT---HHCCHHHHHHHHCHHHHCCCHCCSE
T ss_pred CEEEecCccCCCHhHHHHHHHHHHhccccCCCcEEEEeCCCcCccccccccccccccccccHHHHHHHHHHHhhcccccE
Confidence 5678888765 567777777776 555677899999999632211 111111121111 1137
Q ss_pred EEEeCCCchhhhh
Q 023226 87 ITILRGNHESRQI 99 (285)
Q Consensus 87 v~~lrGNHE~~~~ 99 (285)
|++++|+||-...
T Consensus 81 vvlvPg~~D~~~~ 93 (209)
T PF04042_consen 81 VVLVPGPNDPTSS 93 (209)
T ss_dssp EEEE--TTCTT-S
T ss_pred EEEeCCCcccccc
Confidence 9999999997644
No 119
>TIGR01390 CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphodiesterase. 2',3'-cyclic-nucleotide 2'-phosphodiesterase is a bifunctional enzyme localized to the periplasm of Gram-negative bacteria. 2',3'-cyclic-nucleotide 2'-phosphodiesters are intermediates formed during the hydrolysis of RNA by the ribonuclease I, which is also found to the periplasm, and other enzymes of the RNAse T2 family. Bacteria are unable to transport 2',3'-cyclic-nucleotides into the cytoplasm. 2',3'-cyclic-nucleotide 2'-phosphodiesterase contains 2 active sites which catalyze the reactions that convert the 2',3'-cyclic-nucleotide into a 3'-nucleotide, which is then converted into nucleic acid and phosphate. Both final products can be transported into the cytoplasm. Thus, it has been suggested that 2',3'-cyclic-nucleotide 2'-phosphodiesterase has a 'scavenging' function. Experimental evidence indicates that 2',3'-cyclic-nucleotide 2'-phosphodiesterase enables Yersinia enterocolitica O:8 to grow on 2'3'-cAMP as a
Probab=87.30 E-value=0.84 Score=46.14 Aligned_cols=66 Identities=18% Similarity=0.122 Sum_probs=41.4
Q ss_pred CcEEEEecCCCCHH----------------HHHHHHHhcCCC-CCCcEEEeCCccCCCCCh-------------HHHHHH
Q 023226 26 SPVTICGDIHGQFH----------------DLAELFRIGGKC-PDTNYLFMGDYVDRGYYS-------------VETVTL 75 (285)
Q Consensus 26 ~~i~vvGDiHG~~~----------------~l~~il~~~~~~-~~~~~vflGD~vDrG~~s-------------~evl~~ 75 (285)
-+|+-..|+||++. .+..+++..... +..-+|-.||.+...+.+ .-++.+
T Consensus 3 l~Il~TnDlH~~l~~~dy~~~~~~~~~Glar~atli~~~R~e~~n~lllD~GD~~qGsp~~~~~~~~~~~~~~~~p~~~~ 82 (626)
T TIGR01390 3 LRIVETTDLHTNLMDYDYYKDKPTDKFGLTRTATLIKQARAEVKNSVLVDNGDLIQGSPLGDYMAAQGLKAGQMHPVYKA 82 (626)
T ss_pred EEEEEEcCCccCccCCcccCCCCCCCcCHHHHHHHHHHHHhhCCCeEEEECCCcCCCccchhhhhhccccCCCcChHHHH
Confidence 36888999999964 344455544322 233344599998755432 235666
Q ss_pred HHhccccCCCcEEEeCCCchh
Q 023226 76 LVSLKVRYPQRITILRGNHES 96 (285)
Q Consensus 76 l~~lk~~~p~~v~~lrGNHE~ 96 (285)
+-.|.. =....||||.
T Consensus 83 mN~lgy-----Da~tlGNHEF 98 (626)
T TIGR01390 83 MNLLKY-----DVGNLGNHEF 98 (626)
T ss_pred HhhcCc-----cEEecccccc
Confidence 666653 3477899994
No 120
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=86.24 E-value=0.92 Score=49.18 Aligned_cols=66 Identities=23% Similarity=0.274 Sum_probs=41.3
Q ss_pred CcEEEEecCCCCHH----------------HHHHHHHhcCCCCCCcEEE-eCCccCCCCC--------------hHHHHH
Q 023226 26 SPVTICGDIHGQFH----------------DLAELFRIGGKCPDTNYLF-MGDYVDRGYY--------------SVETVT 74 (285)
Q Consensus 26 ~~i~vvGDiHG~~~----------------~l~~il~~~~~~~~~~~vf-lGD~vDrG~~--------------s~evl~ 74 (285)
-+|+...|+||++. .+..+++.........+++ .||.+...+- ...++.
T Consensus 42 l~il~tnD~Hg~l~~~~y~~~~~~~~~Glar~at~i~~~r~~~~n~llld~GD~~qGs~l~~~~~~~~~~~~~~~~~~i~ 121 (1163)
T PRK09419 42 IQILATTDLHGNFMDYDYASDKETTGFGLAQTATLIKKARKENPNTLLVDNGDLIQGNPLGEYAVKDNILFKNKTHPMIK 121 (1163)
T ss_pred EEEEEEecccccccccccccCCCCCCcCHHHHHHHHHHHHHhCCCeEEEeCCCccCCChhhhHHhhhccccCCCcCHHHH
Confidence 46888999999863 3444555443222334554 9999976551 224556
Q ss_pred HHHhccccCCCcEEEeCCCchh
Q 023226 75 LLVSLKVRYPQRITILRGNHES 96 (285)
Q Consensus 75 ~l~~lk~~~p~~v~~lrGNHE~ 96 (285)
.+..+.. -....||||.
T Consensus 122 ~mN~lgy-----Da~~lGNHEF 138 (1163)
T PRK09419 122 AMNALGY-----DAGTLGNHEF 138 (1163)
T ss_pred HHhhcCc-----cEEeeccccc
Confidence 6665543 3466899995
No 121
>PRK11907 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=83.20 E-value=2 Score=44.76 Aligned_cols=66 Identities=21% Similarity=0.155 Sum_probs=41.1
Q ss_pred CcEEEEecCCCCHH----------------HHHHHHHhcCCC-CCCcEEEeCCccCCCCCh--------------HHHHH
Q 023226 26 SPVTICGDIHGQFH----------------DLAELFRIGGKC-PDTNYLFMGDYVDRGYYS--------------VETVT 74 (285)
Q Consensus 26 ~~i~vvGDiHG~~~----------------~l~~il~~~~~~-~~~~~vflGD~vDrG~~s--------------~evl~ 74 (285)
.+|+-..|+||++. .+..+++..... +..-+|-.||.+...+.+ ..++.
T Consensus 116 LtIL~TnDiHg~l~~~dy~~~~~~~~~GlaRlAtlI~~~Rae~~NtLllD~GD~iQGSpl~~~~a~~~~~~~g~~~P~i~ 195 (814)
T PRK11907 116 VRILSTTDLHTNLVNYDYYQDKPSQTLGLAKTAVLIEEAKKENPNVVLVDNGDTIQGTPLGTYKAIVDPVEEGEQHPMYA 195 (814)
T ss_pred EEEEEEEeecCCcccccccccCccccccHHHHHHHHHHHHHhCCCEEEEecCCCCCCCcccchhhhccccccCcchHHHH
Confidence 46888999999964 333344443222 233455599998754422 13677
Q ss_pred HHHhccccCCCcEEEeCCCchh
Q 023226 75 LLVSLKVRYPQRITILRGNHES 96 (285)
Q Consensus 75 ~l~~lk~~~p~~v~~lrGNHE~ 96 (285)
++-.|.. -....||||.
T Consensus 196 amN~LGy-----DA~tLGNHEF 212 (814)
T PRK11907 196 ALEALGF-----DAGTLGNHEF 212 (814)
T ss_pred HHhccCC-----CEEEechhhc
Confidence 7777754 3577899995
No 122
>COG3855 Fbp Uncharacterized protein conserved in bacteria [Carbohydrate transport and metabolism]
Probab=82.46 E-value=0.86 Score=43.78 Aligned_cols=41 Identities=27% Similarity=0.470 Sum_probs=34.3
Q ss_pred CcEEEeCCccCCCCChHHHHHHHHhccccCCCcEEEeCCCchhhhh
Q 023226 54 TNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQI 99 (285)
Q Consensus 54 ~~~vflGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~ 99 (285)
+++-.+||+-||||++-.+++-|.... .+=+--||||-.++
T Consensus 192 DhLHiVGDIyDRGP~pd~Imd~L~~yh-----svDiQWGNHDilWm 232 (648)
T COG3855 192 DHLHIVGDIYDRGPYPDKIMDTLINYH-----SVDIQWGNHDILWM 232 (648)
T ss_pred hheeeecccccCCCCchHHHHHHhhcc-----cccccccCcceEEe
Confidence 456689999999999999999988763 46788899998765
No 123
>KOG2476 consensus Uncharacterized conserved protein [Function unknown]
Probab=82.26 E-value=4.1 Score=39.22 Aligned_cols=69 Identities=19% Similarity=0.351 Sum_probs=51.0
Q ss_pred CCcEEEEecCCCCHHHHHHHHHhcCCC--CCCcEEEeCCccCCCCChHHHHHHHHhccccCCCcEEEeCCCc
Q 023226 25 KSPVTICGDIHGQFHDLAELFRIGGKC--PDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNH 94 (285)
Q Consensus 25 ~~~i~vvGDiHG~~~~l~~il~~~~~~--~~~~~vflGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNH 94 (285)
+.+|.|+||.-|+++.|.+-.+.+... |-+-++++|++.+-...+-|++.+...- ...|--++++-+|-
T Consensus 5 ~~kILv~Gd~~Gr~~eli~rI~~v~Kk~GpFd~liCvGnfF~~~~~~~e~~~ykng~-~~vPiptY~~g~~~ 75 (528)
T KOG2476|consen 5 DAKILVCGDVEGRFDELIKRIQKVNKKSGPFDLLICVGNFFGHDTQNAEVEKYKNGT-KKVPIPTYFLGDNA 75 (528)
T ss_pred CceEEEEcCccccHHHHHHHHHHHhhcCCCceEEEEecccCCCccchhHHHHHhcCC-ccCceeEEEecCCC
Confidence 479999999999999987777665432 3566788999998766677877776553 34555577777765
No 124
>TIGR01530 nadN NAD pyrophosphatase/5'-nucleotidase NadN. This model describes NadN of Haemophilus influenzae and a small number of close homologs in pathogenic, Gram-negative bacteria. NadN is a periplasmic enzyme that cleaves NAD (nicotinamide adenine dinucleotide) to NMN (nicotinamide mononucleotide) and AMP. The NMN must be converted by a 5'-nucleotidase to nicotinamide riboside for import. NadN belongs a large family of 5'-nucleotidases and has NMN 5'-nucleotidase activity for NMN, AMP, etc.
Probab=82.24 E-value=2.7 Score=41.76 Aligned_cols=65 Identities=18% Similarity=0.156 Sum_probs=39.4
Q ss_pred cEEEEecCCCCHH---------------------HHHHHHHhcCC-CCCCcEEEeCCccCCCCCh-----HHHHHHHHhc
Q 023226 27 PVTICGDIHGQFH---------------------DLAELFRIGGK-CPDTNYLFMGDYVDRGYYS-----VETVTLLVSL 79 (285)
Q Consensus 27 ~i~vvGDiHG~~~---------------------~l~~il~~~~~-~~~~~~vflGD~vDrG~~s-----~evl~~l~~l 79 (285)
.|+-+.|+||++. .+..++++... .+..-++..||.+...+.+ ...++++-++
T Consensus 2 tILhtND~Hg~l~~~~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~n~l~ldaGD~~~gs~~~~~~~g~~~i~~~N~~ 81 (550)
T TIGR01530 2 SIIHINDHHSHLEPEELEIALAGEQLKAAIGGFAALNAEINKLRAESKNALVLHAGDAIIGTLYFTLFGGRADAALMNAA 81 (550)
T ss_pred EEEEEccccccccCcccccccCCCccccccCCHHHHHHHHHHHHhhCCCeEEEECCCCCCCccchhhcCCHHHHHHHhcc
Confidence 3667788888753 33444444332 2334455699998755432 3456666666
Q ss_pred cccCCCcEEEeCCCchh
Q 023226 80 KVRYPQRITILRGNHES 96 (285)
Q Consensus 80 k~~~p~~v~~lrGNHE~ 96 (285)
.. -....||||.
T Consensus 82 g~-----Da~~lGNHEF 93 (550)
T TIGR01530 82 GF-----DFFTLGNHEF 93 (550)
T ss_pred CC-----CEEEeccccc
Confidence 53 4578899995
No 125
>PRK09558 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; Reviewed
Probab=81.80 E-value=2.1 Score=42.53 Aligned_cols=68 Identities=19% Similarity=0.086 Sum_probs=39.4
Q ss_pred CCcEEEEecCCCCHH----------HHHHHHHhcC-----CCCCCcEEEeCCccCCCCC-----hHHHHHHHHhccccCC
Q 023226 25 KSPVTICGDIHGQFH----------DLAELFRIGG-----KCPDTNYLFMGDYVDRGYY-----SVETVTLLVSLKVRYP 84 (285)
Q Consensus 25 ~~~i~vvGDiHG~~~----------~l~~il~~~~-----~~~~~~~vflGD~vDrG~~-----s~evl~~l~~lk~~~p 84 (285)
+..|+-+.|+||++. .+..+++... ..+..-++..||.+...+. ..-+++++.++...
T Consensus 34 ~ltil~tnD~Hg~~~~~~~~~~G~a~~a~~i~~~r~~~~~~~~~~l~ldaGD~~~Gs~~s~~~~g~~~i~~mN~~g~D-- 111 (551)
T PRK09558 34 KITILHTNDHHGHFWRNEYGEYGLAAQKTLVDQIRKEVAAEGGSVLLLSGGDINTGVPESDLQDAEPDFRGMNLIGYD-- 111 (551)
T ss_pred EEEEEEecccCCCccccccCCccHHHHHHHHHHHHHHhhccCCCEEEEcCCccccceEhhhhcCCchhHHHHhcCCCC--
Confidence 346888899999874 2333444332 1233345569999764332 23456666666543
Q ss_pred CcEEEeCCCchhh
Q 023226 85 QRITILRGNHESR 97 (285)
Q Consensus 85 ~~v~~lrGNHE~~ 97 (285)
+ ...||||.-
T Consensus 112 --a-~tlGNHEFD 121 (551)
T PRK09558 112 --A-MAVGNHEFD 121 (551)
T ss_pred --E-EcccccccC
Confidence 4 445999953
No 126
>KOG3947 consensus Phosphoesterases [General function prediction only]
Probab=81.64 E-value=2.1 Score=38.61 Aligned_cols=64 Identities=20% Similarity=0.298 Sum_probs=41.2
Q ss_pred CcEEEEecCCCCHHHHHHHHHhcCCCCCCcEEEeCCccCCCCChHHHHHHHHhccccCC-CcEEEeCCCchhh
Q 023226 26 SPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYP-QRITILRGNHESR 97 (285)
Q Consensus 26 ~~i~vvGDiHG~~~~l~~il~~~~~~~~~~~vflGD~vDrG~~s~evl~~l~~lk~~~p-~~v~~lrGNHE~~ 97 (285)
.+.+.|+|.|+...+.. ..++.+-++-+||+..-|. +-||..+=..+-. .| ..=+.|+||||.-
T Consensus 62 ~r~VcisdtH~~~~~i~------~~p~gDvlihagdfT~~g~-~~ev~~fn~~~gs-lph~yKIVIaGNHELt 126 (305)
T KOG3947|consen 62 ARFVCISDTHELTFDIN------DIPDGDVLIHAGDFTNLGL-PEEVIKFNEWLGS-LPHEYKIVIAGNHELT 126 (305)
T ss_pred eEEEEecCcccccCccc------cCCCCceEEeccCCccccC-HHHHHhhhHHhcc-CcceeeEEEeecccee
Confidence 47999999998766543 2344555678999987665 4555554332221 12 2356899999964
No 127
>PTZ00422 glideosome-associated protein 50; Provisional
Probab=80.69 E-value=2.6 Score=40.14 Aligned_cols=71 Identities=11% Similarity=0.039 Sum_probs=40.2
Q ss_pred CCcEEEEecCC-CCHHHH--HHHHHhc-CCCCCCcEEEeCCccCCCCChHH------HHHHHHhcc---ccCCCcEEEeC
Q 023226 25 KSPVTICGDIH-GQFHDL--AELFRIG-GKCPDTNYLFMGDYVDRGYYSVE------TVTLLVSLK---VRYPQRITILR 91 (285)
Q Consensus 25 ~~~i~vvGDiH-G~~~~l--~~il~~~-~~~~~~~~vflGD~vDrG~~s~e------vl~~l~~lk---~~~p~~v~~lr 91 (285)
+-+.+++||-= |.+... .+.+... ...+.+-+|-+||-++.|..++. ..+-+..-. ..- -.+++.
T Consensus 26 ~l~F~~vGDwG~g~~~Q~~VA~~M~~~~~~~~~~FVls~GDNF~~Gv~sv~Dp~f~~~FE~vY~~~s~~L~~--Pwy~vL 103 (394)
T PTZ00422 26 QLRFASLGNWGTGSKQQKLVASYLKQYAKNERVTFLVSPGSNFPGGVDGLNDPKWKHCFENVYSEESGDMQI--PFFTVL 103 (394)
T ss_pred eEEEEEEecCCCCchhHHHHHHHHHHHHHhCCCCEEEECCccccCCCCCccchhHHhhHhhhccCcchhhCC--CeEEeC
Confidence 34799999953 333322 2233332 22344556679998887876533 344443221 112 389999
Q ss_pred CCchhh
Q 023226 92 GNHESR 97 (285)
Q Consensus 92 GNHE~~ 97 (285)
||||..
T Consensus 104 GNHDy~ 109 (394)
T PTZ00422 104 GQADWD 109 (394)
T ss_pred Cccccc
Confidence 999973
No 128
>KOG2310 consensus DNA repair exonuclease MRE11 [Replication, recombination and repair]
Probab=76.64 E-value=5.6 Score=39.17 Aligned_cols=50 Identities=20% Similarity=0.208 Sum_probs=38.6
Q ss_pred cCCcEEEEecCCC------------CHHHHHHHHHhcCCCCCCcEEEeCCccCCCCChHHHH
Q 023226 24 VKSPVTICGDIHG------------QFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETV 73 (285)
Q Consensus 24 ~~~~i~vvGDiHG------------~~~~l~~il~~~~~~~~~~~vflGD~vDrG~~s~evl 73 (285)
...||.|-.|+|= .+..+..+|+.+.....+-++.-||+..-..-|.+++
T Consensus 12 ntirILVaTD~HlGY~EkD~vrg~DSf~tFeEIl~iA~e~~VDmiLlGGDLFHeNkPSr~~L 73 (646)
T KOG2310|consen 12 NTIRILVATDNHLGYGEKDAVRGDDSFVTFEEILEIAQENDVDMILLGGDLFHENKPSRKTL 73 (646)
T ss_pred cceEEEEeecCccccccCCcccccchHHHHHHHHHHHHhcCCcEEEecCcccccCCccHHHH
Confidence 3468999999994 4568888998887777777888999997776665543
No 129
>PRK09418 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=75.97 E-value=4.5 Score=42.02 Aligned_cols=67 Identities=21% Similarity=0.160 Sum_probs=40.6
Q ss_pred CCcEEEEecCCCCHHH----------------HHHHHHhcCCC-CCCcEEEeCCccCCCCC-------------------
Q 023226 25 KSPVTICGDIHGQFHD----------------LAELFRIGGKC-PDTNYLFMGDYVDRGYY------------------- 68 (285)
Q Consensus 25 ~~~i~vvGDiHG~~~~----------------l~~il~~~~~~-~~~~~vflGD~vDrG~~------------------- 68 (285)
.-+|+-..|+||++.. +..++++.... +..-+|-.||.+-..+.
T Consensus 39 ~L~IL~TnDiHg~l~~~dy~~~~~~~~~Glar~AtlI~~~R~e~~ntlllD~GD~iqGspl~~~~~~~~~~~~~~~~~~~ 118 (780)
T PRK09418 39 NLRILETSDIHVNLMNYDYYQTKTDNKVGLVQTATLVNKAREEAKNSVLFDDGDALQGTPLGDYVANKINDPKKPVDPSY 118 (780)
T ss_pred EEEEEEEeecCCCCcCcCccccCCcCCCCHHHHHHHHHHHHHhCCCeEEEECCCCCCCchHHHHHhhccccccccccccc
Confidence 3478889999998632 33444443222 23344559998743332
Q ss_pred hHHHHHHHHhccccCCCcEEEeCCCchh
Q 023226 69 SVETVTLLVSLKVRYPQRITILRGNHES 96 (285)
Q Consensus 69 s~evl~~l~~lk~~~p~~v~~lrGNHE~ 96 (285)
...++.++-+|.. =....||||.
T Consensus 119 ~~p~i~~mN~lgy-----Da~tlGNHEF 141 (780)
T PRK09418 119 THPLYRLMNLMKY-----DVISLGNHEF 141 (780)
T ss_pred chHHHHHHhccCC-----CEEecccccc
Confidence 1246666766654 3477899994
No 130
>PTZ00235 DNA polymerase epsilon subunit B; Provisional
Probab=70.51 E-value=12 Score=34.05 Aligned_cols=73 Identities=15% Similarity=0.296 Sum_probs=46.4
Q ss_pred CCcEEEEecCCC----CHHHHHHHHHhcC-CCC----CCcEEEeCCccCCC----CCh----HHHHHHHHhc-cccCC--
Q 023226 25 KSPVTICGDIHG----QFHDLAELFRIGG-KCP----DTNYLFMGDYVDRG----YYS----VETVTLLVSL-KVRYP-- 84 (285)
Q Consensus 25 ~~~i~vvGDiHG----~~~~l~~il~~~~-~~~----~~~~vflGD~vDrG----~~s----~evl~~l~~l-k~~~p-- 84 (285)
..+++|+||+|= .+++|.++|+... ..+ ..-+|++|+++-+. ..+ .+-.+-|..+ ...||
T Consensus 27 ~~~~VilSDV~LD~p~tl~~L~kvf~~y~~~~~~~~~P~~fVL~GnF~S~p~~~~~~~~~~yk~~Fd~La~llls~fp~L 106 (291)
T PTZ00235 27 RHNWIIMHDVYLDSPYTFEVLDKMLSLYVNTYPENELPVGFIFMGDFISLKFDYNRNFHKVYIKGFEKLSVMLISKFKLI 106 (291)
T ss_pred ceEEEEEEeeccCCHHHHHHHHHHHHHhhccCcccCCCeEEEEecCccCCcccCCCCchHHHHHHHHHHHHHHHHhChHH
Confidence 357999999995 5667777887652 212 34588999997652 222 2334444432 22344
Q ss_pred ---CcEEEeCCCchhh
Q 023226 85 ---QRITILRGNHESR 97 (285)
Q Consensus 85 ---~~v~~lrGNHE~~ 97 (285)
.++++++|-.|-.
T Consensus 107 ~~~s~fVFVPGpnDPw 122 (291)
T PTZ00235 107 LEHCYLIFIPGINDPC 122 (291)
T ss_pred HhcCeEEEECCCCCCC
Confidence 4799999999964
No 131
>PF06874 FBPase_2: Firmicute fructose-1,6-bisphosphatase; InterPro: IPR009164 Fructose 1,6-bisphosphatase catalyses the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate []. This is an essential reaction in the process of gluconeogenesis, the process by which non-carbohydrate precursors are converted to glucose, and hence this enzyme is found almost universally. Enzyme activity can be regulated by a number of different mechanisms including AMP inhibition, cylic AMP-dependent phosphorylation and light-dependent-activation. This entry represents a group of fructose 1,6-bisphosphatases found within the Firmicutes (low GC Gram-positive bacteria) which do not show any significant sequence similarity to the enzymes from other organisms. The Bacillus subtilis enzyme is inhibited by AMP, though this can be overcome by phosphoenolpyruvate, and is dependent on Mn(2+) [, ]. Mutants lacking this enzyme are apparently still able to grow on gluconeogenic growth substrates such as malate and glycerol.; GO: 0042132 fructose 1,6-bisphosphate 1-phosphatase activity, 0006094 gluconeogenesis
Probab=63.66 E-value=6.7 Score=39.28 Aligned_cols=70 Identities=20% Similarity=0.259 Sum_probs=47.3
Q ss_pred CHHHHHHHHHHCCCe----EEEeeceeee--cceEE-ecCCeeEEEE---ecCCccccCCCcEEEEEEcCCCCeEEEEEe
Q 023226 197 GQDISEQFNHTNNLK----LIARAHQLVM--EGYNW-GHEQKVVTIF---SAPNYCYRCGNMASILEVDDCKGHTFIQFE 266 (285)
Q Consensus 197 g~~~~~~fl~~~~~~----~iirgH~~~~--~G~~~-~~~~~~itif---Sa~~y~~~~~n~~a~l~i~~~~~~~~~~~~ 266 (285)
.++..++.|+..|++ .||.||+||. +|-.. -++|+++.|. |. .|...++ -|+.=.|.++-.++..+=+
T Consensus 507 ~e~~c~~IL~EFgl~~~~~hIINGHvPVk~k~GEsPIKa~Gkl~VIDGGfsk-AYqk~TG-IAGYTLiyNS~gl~L~~H~ 584 (640)
T PF06874_consen 507 DEEICDKILEEFGLDPERGHIINGHVPVKVKKGESPIKANGKLIVIDGGFSK-AYQKTTG-IAGYTLIYNSYGLQLVAHQ 584 (640)
T ss_pred CHHHHHHHHHHhCCCCCCCeEECCccccccCCCCCCccCCCEEEEEcChhhh-hhccccC-ccceEEEecCCcceeccCC
Confidence 467888999999998 9999999986 66433 4589999984 44 3333322 3455455555556666655
Q ss_pred cC
Q 023226 267 PA 268 (285)
Q Consensus 267 ~~ 268 (285)
|-
T Consensus 585 pF 586 (640)
T PF06874_consen 585 PF 586 (640)
T ss_pred CC
Confidence 53
No 132
>KOG2679 consensus Purple (tartrate-resistant) acid phosphatase [Posttranslational modification, protein turnover, chaperones]
Probab=61.62 E-value=15 Score=33.34 Aligned_cols=93 Identities=20% Similarity=0.312 Sum_probs=0.0
Q ss_pred CHHHHHHHH----HHHHHHhcCCCccccCCcEEEEec--CCCCHHHHHHHHHh--cCCCCCCcEEE-eCC-ccCCCC---
Q 023226 1 MFQVRVLCE----KAKEILMDESNVQPVKSPVTICGD--IHGQFHDLAELFRI--GGKCPDTNYLF-MGD-YVDRGY--- 67 (285)
Q Consensus 1 ~~~~~~l~~----~~~~il~~e~~~~~~~~~i~vvGD--iHG~~~~l~~il~~--~~~~~~~~~vf-lGD-~vDrG~--- 67 (285)
|.-+.-|+. .+.--.-.+|.--.-+-+++|||| .+|.+..-+..++. ++..-+.++|. +|| +-|-|.
T Consensus 15 i~t~f~I~~~~~s~~eLp~l~~p~~~dgslsflvvGDwGr~g~~nqs~va~qmg~ige~l~idfvlS~GDNfYd~G~~~~ 94 (336)
T KOG2679|consen 15 ILTIFFILSAISSTAELPRLYDPAKSDGSLSFLVVGDWGRRGSFNQSQVALQMGEIGEKLDIDFVLSTGDNFYDTGLTSE 94 (336)
T ss_pred HHHHHHHhhccchhhhhhhhcCCCCCCCceEEEEEcccccCCchhHHHHHHHHHhHHHhccceEEEecCCcccccCCCCC
Q ss_pred ------ChHHHHHHHHhccccCCCcEEEeCCCchhh
Q 023226 68 ------YSVETVTLLVSLKVRYPQRITILRGNHESR 97 (285)
Q Consensus 68 ------~s~evl~~l~~lk~~~p~~v~~lrGNHE~~ 97 (285)
++-+-+.---.|+.. -+.+.||||.+
T Consensus 95 ~Dp~Fq~sF~nIYT~pSLQkp----Wy~vlGNHDyr 126 (336)
T KOG2679|consen 95 NDPRFQDSFENIYTAPSLQKP----WYSVLGNHDYR 126 (336)
T ss_pred CChhHHhhhhhcccCcccccc----hhhhccCcccc
No 133
>PF02875 Mur_ligase_C: Mur ligase family, glutamate ligase domain This Prosite entry is a subset of the Pfam family.; InterPro: IPR004101 The bacterial cell wall provides strength and rigidity to counteract internal osmotic pressure, and protection against the environment. The peptidoglycan layer gives the cell wall its strength, and helps maintain the overall shape of the cell. The basic peptidoglycan structure of both Gram-positive and Gram-negative bacteria is comprised of a sheet of glycan chains connected by short cross-linking polypeptides. Biosynthesis of peptidoglycan is a multi-step (11-12 steps) process comprising three main stages: (1) formation of UDP-N-acetylmuramic acid (UDPMurNAc) from N-acetylglucosamine (GlcNAc). (2) addition of a short polypeptide chain to the UDPMurNAc. (3) addition of a second GlcNAc to the disaccharide-pentapeptide building block and transport of this unit through the cytoplasmic membrane and incorporation into the growing peptidoglycan layer. Stage two involves four key Mur ligase enzymes: MurC (6.3.2.8 from EC) [], MurD (6.3.2.9 from EC) [], MurE (6.3.2.13 from EC) [] and MurF (6.3.2.10 from EC) []. These four Mur ligases are responsible for the successive additions of L-alanine, D-glutamate, meso-diaminopimelate or L-lysine, and D-alanyl-D-alanine to UDP-N-acetylmuramic acid. All four Mur ligases are topologically similar to one another, even though they display low sequence identity. They are each composed of three domains: an N-terminal Rossmann-fold domain responsible for binding the UDPMurNAc substrate; a central domain (similar to ATP-binding domains of several ATPases and GTPases); and a C-terminal domain (similar to dihydrofolate reductase fold) that appears to be associated with binding the incoming amino acid. The conserved sequence motifs found in the four Mur enzymes also map to other members of the Mur ligase family, including folylpolyglutamate synthetase, cyanophycin synthetase and the capB enzyme from Bacillales []. This entry represents the C-terminal domain from all four stage 2 Mur enzymes: UDP-N-acetylmuramate-L-alanine ligase (MurC), UDP-N-acetylmuramoylalanine-D-glutamate ligase (MurD), UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase (MurE), and UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase (MurF). This entry also includes the C-terminal domain of folylpolyglutamate synthase that transfers glutamate to folylpolyglutamate and cyanophycin synthetase that catalyses the biosynthesis of the cyanobacterial reserve material multi-L-arginyl-poly-L-aspartate (cyanophycin) []. The C-terminal domain is almost always associated with the cytoplasmic peptidoglycan synthetases, N-terminal domain (see IPR000713 from INTERPRO).; GO: 0005524 ATP binding, 0016874 ligase activity, 0009058 biosynthetic process; PDB: 2Y68_A 3UAG_A 4UAG_A 2UAG_A 1E0D_A 2XPC_A 2WJP_A 2VTE_A 2Y67_A 1EEH_A ....
Probab=47.79 E-value=42 Score=24.35 Aligned_cols=69 Identities=12% Similarity=0.054 Sum_probs=44.6
Q ss_pred CcEEEEecCCCCHHHHHHHHHhcCC--CCCCcEEEeCCccCCCCChHHHHHHHHhccccCCCcEEEeCCCc
Q 023226 26 SPVTICGDIHGQFHDLAELFRIGGK--CPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNH 94 (285)
Q Consensus 26 ~~i~vvGDiHG~~~~l~~il~~~~~--~~~~~~vflGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNH 94 (285)
..+.|+=|---|.+.+.++++.+.. +....++.+|+.-|+|..+.+....+.++...+...+++...|+
T Consensus 12 ~~~~vi~D~ahNp~s~~a~l~~l~~~~~~~~~i~V~G~~~d~g~~~~~~~~~~~~~~~~~~d~vi~~~~~~ 82 (91)
T PF02875_consen 12 NGPTVIDDYAHNPDSIRALLEALKELYPKGRIIAVFGAMGDLGSKDKDFHEEIGELAAQLADVVILTGDNP 82 (91)
T ss_dssp TTEEEEEET--SHHHHHHHHHHHHHHCTTSEEEEEEEEBTT-HTSHHHCHHHHHHHHTTCSSEEEEETSBT
T ss_pred CCcEEEEECCCCHHHHHHHHHHHHHhccCCcEEEEEccccccccccHHHHHHHHHHHHhcCCEEEEcCCCC
Confidence 3567788877788888888876632 34555668999999888887765566555555555555555553
No 134
>PF12641 Flavodoxin_3: Flavodoxin domain
Probab=47.53 E-value=1e+02 Score=25.39 Aligned_cols=53 Identities=23% Similarity=0.340 Sum_probs=39.5
Q ss_pred EEEecCCCCHHHHHHHHHh-cCC------------CCCCcEEEeCCccCCCCChHHHHHHHHhccc
Q 023226 29 TICGDIHGQFHDLAELFRI-GGK------------CPDTNYLFMGDYVDRGYYSVETVTLLVSLKV 81 (285)
Q Consensus 29 ~vvGDiHG~~~~l~~il~~-~~~------------~~~~~~vflGD~vDrG~~s~evl~~l~~lk~ 81 (285)
++.+=.+||-..+.+.+.. ++. ..+.++||+|=.+|+|.-+-++..+|..|+-
T Consensus 2 IvYsS~TGNTkkvA~aI~~~l~~~~~~~~~~~~~~~~~yD~i~lG~w~d~G~~d~~~~~fl~~l~~ 67 (160)
T PF12641_consen 2 IVYSSRTGNTKKVAEAIAEALGAKDIVSVEEPPEDLEDYDLIFLGFWIDKGTPDKDMKEFLKKLKG 67 (160)
T ss_pred EEEECCCChHHHHHHHHHHHCCCceeEeccccccCCCCCCEEEEEcCccCCCCCHHHHHHHHHccC
Confidence 4555567888777665543 222 2346799999999999999999999999863
No 135
>PF10083 DUF2321: Uncharacterized protein conserved in bacteria (DUF2321); InterPro: IPR016891 This entry is represented by Bacteriophage 'Lactobacillus prophage Lj928', Orf-Ljo1454. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=42.33 E-value=7.3 Score=32.02 Aligned_cols=46 Identities=26% Similarity=0.512 Sum_probs=29.6
Q ss_pred cCHHHHHHHHHHCCCe---------EEEeeceeeecceEEecCCeeEEEEecCCccccCCC
Q 023226 196 FGQDISEQFNHTNNLK---------LIARAHQLVMEGYNWGHEQKVVTIFSAPNYCYRCGN 247 (285)
Q Consensus 196 fg~~~~~~fl~~~~~~---------~iirgH~~~~~G~~~~~~~~~itifSa~~y~~~~~n 247 (285)
-++...+.||.+.|-+ .=|||+-.++..+.+..+ +.+|.||.+|+.
T Consensus 22 ~~p~~~~~fC~kCG~~tI~~Cp~C~~~IrG~y~v~gv~~~g~~------~~~PsYC~~CGk 76 (158)
T PF10083_consen 22 KNPELREKFCSKCGAKTITSCPNCSTPIRGDYHVEGVFGLGGH------YEAPSYCHNCGK 76 (158)
T ss_pred cCchHHHHHHHHhhHHHHHHCcCCCCCCCCceecCCeeeeCCC------CCCChhHHhCCC
Confidence 3445667777776644 458999877444443222 559999987764
No 136
>COG4320 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=39.96 E-value=24 Score=32.69 Aligned_cols=61 Identities=28% Similarity=0.414 Sum_probs=40.3
Q ss_pred HHHhcCCCccccCCcEEEEecCC-CCHHHHHHHHHhcCCCCCCcEEE-eCCcc--CCCCChHHHHHHHHhccc
Q 023226 13 EILMDESNVQPVKSPVTICGDIH-GQFHDLAELFRIGGKCPDTNYLF-MGDYV--DRGYYSVETVTLLVSLKV 81 (285)
Q Consensus 13 ~il~~e~~~~~~~~~i~vvGDiH-G~~~~l~~il~~~~~~~~~~~vf-lGD~v--DrG~~s~evl~~l~~lk~ 81 (285)
+-++.-|..++..+.+.++||.| |||.++.. .+..++| .-|+= --|+....++.++.+|..
T Consensus 44 ~~~~~~p~~lp~~p~tw~cGD~HLgN~ga~~~--------~~G~V~f~i~DFDe~~~g~~~~DlvRl~~Sl~~ 108 (410)
T COG4320 44 QDMKTWPWSLPKTPFTWLCGDAHLGNFGAARN--------SKGNVVFKIADFDEGHLGQYIWDLVRLAVSLVL 108 (410)
T ss_pred HHHhcCccccCCCCceEEecccccccchhhcc--------CCCceEEEecccchhhccchHHHHHHHHHHHHH
Confidence 34566677888889999999999 77777643 2333444 66652 126666777777766643
No 137
>PF13258 DUF4049: Domain of unknown function (DUF4049)
Probab=38.09 E-value=34 Score=30.33 Aligned_cols=88 Identities=24% Similarity=0.340 Sum_probs=45.8
Q ss_pred CcEEEeCCcc-CCCC---ChHHHHHHHHhcccc-------CCCcEEEeCCCchhhhhhhhhCChHHHHHHh--CChhHHH
Q 023226 54 TNYLFMGDYV-DRGY---YSVETVTLLVSLKVR-------YPQRITILRGNHESRQITQVYGFYDECLRKY--GNANVWK 120 (285)
Q Consensus 54 ~~~vflGD~v-DrG~---~s~evl~~l~~lk~~-------~p~~v~~lrGNHE~~~~~~~~~f~~e~~~~~--~~~~~~~ 120 (285)
...+||||-. ||=. ...=++.+|.+++-. -.++|++|-||||.-. +..| ....... ...+.|
T Consensus 86 tpciflgdhtgdrfsti~gd~yiltllnsm~nme~nkdsrinknvvvlagnhein~-ngny---~arlanhkls~gDTY- 160 (318)
T PF13258_consen 86 TPCIFLGDHTGDRFSTIFGDQYILTLLNSMRNMEGNKDSRINKNVVVLAGNHEINF-NGNY---MARLANHKLSAGDTY- 160 (318)
T ss_pred ccceeecCcccchhhhhcchHHHHHHHHHHHhcccccccccccceEEEecCceecc-CchH---HHHHhhCCCCccchh-
Confidence 4577888864 2311 012355566555431 2358999999999642 2211 1111111 112333
Q ss_pred HHHHHHhhCCceeEE-eceEEEecCCCCCC
Q 023226 121 IFTDLFDYFPLTALV-ESEIFCLHGGLSPS 149 (285)
Q Consensus 121 ~~~~~~~~lP~~~~i-~~~~l~vHgGi~~~ 149 (285)
..+..+|++-.- ..+++-.|-||-.+
T Consensus 161 ---nlIKtldVC~YD~erkvltsHHGIird 187 (318)
T PF13258_consen 161 ---NLIKTLDVCNYDPERKVLTSHHGIIRD 187 (318)
T ss_pred ---hccccccccccCcchhhhhcccCceec
Confidence 335566765332 24688889998543
No 138
>cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain. DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=37.07 E-value=31 Score=30.86 Aligned_cols=40 Identities=30% Similarity=0.355 Sum_probs=26.9
Q ss_pred cEEEeCCccCCCCChHHHHHHHHhccccCCCcEEEeCCCchhh
Q 023226 55 NYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESR 97 (285)
Q Consensus 55 ~~vflGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~ 97 (285)
+++|+||+|.+.- -..+...|.++|.+++..+.+. |-|..
T Consensus 1 ~ilfigdi~g~~G-~~~~~~~l~~lk~~~~~D~vi~--NgEn~ 40 (255)
T cd07382 1 KILFIGDIVGKPG-RKAVKEHLPKLKKEYKIDFVIA--NGENA 40 (255)
T ss_pred CEEEEEeCCCHHH-HHHHHHHHHHHHHHCCCCEEEE--CCccc
Confidence 4799999997633 2245667888888877655555 55543
No 139
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=36.52 E-value=1.1e+02 Score=23.25 Aligned_cols=36 Identities=25% Similarity=0.515 Sum_probs=23.6
Q ss_pred cCCCCCCcEEEeCCccCCCCChHHHHHHHHhccccCCCcEEE
Q 023226 48 GGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITI 89 (285)
Q Consensus 48 ~~~~~~~~~vflGD~vDrG~~s~evl~~l~~lk~~~p~~v~~ 89 (285)
...-|+.++|++|| -|....|+..-+.+ .||++|..
T Consensus 59 ~~~fP~~kfiLIGD---sgq~DpeiY~~ia~---~~P~~i~a 94 (100)
T PF09949_consen 59 LRDFPERKFILIGD---SGQHDPEIYAEIAR---RFPGRILA 94 (100)
T ss_pred HHHCCCCcEEEEee---CCCcCHHHHHHHHH---HCCCCEEE
Confidence 34456778888888 36666777766544 47777654
No 140
>PRK10773 murF UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; Reviewed
Probab=35.49 E-value=1.3e+02 Score=28.90 Aligned_cols=66 Identities=11% Similarity=0.103 Sum_probs=45.7
Q ss_pred CcEEEEecCCC-CHHHHHHHHHhcCCCCCCcEEEeCCccCCCCChHHHHHHHHhccccC-CCcEEEeCC
Q 023226 26 SPVTICGDIHG-QFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRY-PQRITILRG 92 (285)
Q Consensus 26 ~~i~vvGDiHG-~~~~l~~il~~~~~~~~~~~vflGD~vDrG~~s~evl~~l~~lk~~~-p~~v~~lrG 92 (285)
..+.||=|-+. +.+.+.+.|+.+...+..+++.+||+...|+.+.+.-.-+.+.-... .+.++++ |
T Consensus 325 ~g~~iIDDsYn~nP~s~~aaL~~l~~~~~r~i~VlG~m~elG~~~~~~h~~~~~~~~~~~~d~v~~~-G 392 (453)
T PRK10773 325 EGQLLLDDSYNANVGSMTAAAQVLAEMPGYRVMVVGDMAELGAESEACHRQVGEAAKAAGIDKVLSV-G 392 (453)
T ss_pred CCeEEEEcCCCCCHHHHHHHHHHHHhCCCCEEEEECChhhcchHHHHHHHHHHHHHHHcCCCEEEEE-C
Confidence 45788999665 57888888887654445678889999999999988766554433322 3445544 6
No 141
>PLN02965 Probable pheophorbidase
Probab=34.85 E-value=1.5e+02 Score=25.48 Aligned_cols=21 Identities=14% Similarity=-0.017 Sum_probs=16.8
Q ss_pred HHHHHHHHHCCC--eEEEeecee
Q 023226 199 DISEQFNHTNNL--KLIARAHQL 219 (285)
Q Consensus 199 ~~~~~fl~~~~~--~~iirgH~~ 219 (285)
+.+.++++..+. +.++-||+.
T Consensus 59 ~dl~~~l~~l~~~~~~~lvGhSm 81 (255)
T PLN02965 59 RPLFALLSDLPPDHKVILVGHSI 81 (255)
T ss_pred HHHHHHHHhcCCCCCEEEEecCc
Confidence 447788888875 799999985
No 142
>TIGR00282 metallophosphoesterase, MG_246/BB_0505 family. A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase.
Probab=34.01 E-value=37 Score=30.55 Aligned_cols=39 Identities=28% Similarity=0.473 Sum_probs=26.2
Q ss_pred cEEEeCCccCCCCChHH-HHHHHHhccccCCCcEEEeCCCchhh
Q 023226 55 NYLFMGDYVDRGYYSVE-TVTLLVSLKVRYPQRITILRGNHESR 97 (285)
Q Consensus 55 ~~vflGD~vDrG~~s~e-vl~~l~~lk~~~p~~v~~lrGNHE~~ 97 (285)
+++|+||+|.+ ...+ +-..|-++|..++..+.+. |-|..
T Consensus 2 ~ilfiGDi~G~--~Gr~~l~~~L~~lk~~~~~D~vIa--NgEn~ 41 (266)
T TIGR00282 2 KFLFIGDVYGK--AGRKIVKNNLPQLKSKYQADLVIA--NGENT 41 (266)
T ss_pred eEEEEEecCCH--HHHHHHHHHHHHHHHhCCCCEEEE--cCccc
Confidence 58999999944 3344 4466788888877555544 66654
No 143
>TIGR03729 acc_ester putative phosphoesterase. Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system.
Probab=33.88 E-value=54 Score=28.45 Aligned_cols=29 Identities=17% Similarity=0.049 Sum_probs=25.4
Q ss_pred ccCHHHHHHHHHHCCCeEEEeeceeeecc
Q 023226 195 TFGQDISEQFNHTNNLKLIARAHQLVMEG 223 (285)
Q Consensus 195 ~fg~~~~~~fl~~~~~~~iirgH~~~~~G 223 (285)
.+|...+.+++++.+++++|.||......
T Consensus 195 ~~~s~~l~~li~~~~v~~~i~GH~H~~~~ 223 (239)
T TIGR03729 195 FLGSQHFGQLLVKYEIKDVIFGHLHRRFG 223 (239)
T ss_pred ccChHHHHHHHHHhCCCEEEECCccCCCC
Confidence 57888899999999999999999997654
No 144
>smart00854 PGA_cap Bacterial capsule synthesis protein PGA_cap. This protein is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein.
Probab=31.21 E-value=1.1e+02 Score=26.66 Aligned_cols=35 Identities=14% Similarity=0.211 Sum_probs=26.0
Q ss_pred HHHCCCeEEEeeceeeecceEEecCCeeEEEEecCCc
Q 023226 205 NHTNNLKLIARAHQLVMEGYNWGHEQKVVTIFSAPNY 241 (285)
Q Consensus 205 l~~~~~~~iirgH~~~~~G~~~~~~~~~itifSa~~y 241 (285)
+-..|+++||-||..+..+++.. ++++| +||-=|+
T Consensus 201 l~~~G~DvIiG~H~H~~~~~e~~-~~~~I-~YslGNf 235 (239)
T smart00854 201 LIDAGADVVIGHHPHVLQPIEIY-KGKLI-AYSLGNF 235 (239)
T ss_pred HHHcCCCEEEcCCCCcCCceEEE-CCEEE-EEccccc
Confidence 33469999999999999999875 56665 5665444
No 145
>COG3855 Fbp Uncharacterized protein conserved in bacteria [Carbohydrate transport and metabolism]
Probab=30.20 E-value=23 Score=34.38 Aligned_cols=65 Identities=23% Similarity=0.295 Sum_probs=39.2
Q ss_pred HHHHHHHHHHCCCe----EEEeeceeeecc--eE-EecCCeeEEE---EecCCccccCCCcEEEEEEcCCCCeEEEE
Q 023226 198 QDISEQFNHTNNLK----LIARAHQLVMEG--YN-WGHEQKVVTI---FSAPNYCYRCGNMASILEVDDCKGHTFIQ 264 (285)
Q Consensus 198 ~~~~~~fl~~~~~~----~iirgH~~~~~G--~~-~~~~~~~iti---fSa~~y~~~~~n~~a~l~i~~~~~~~~~~ 264 (285)
++..++.++..|++ .||.||+|+.++ -. .-++|++|-| ||- .|...++ -|+.-.+-++..++.+.
T Consensus 515 e~ic~kil~eFGLdpe~ghiINGHtPVke~~GE~PIKAngKliVIDGGFsk-AYqs~Tg-iAGYTllYNSfGmqLvs 589 (648)
T COG3855 515 EEICRKILEEFGLDPEGGHIINGHTPVKEKNGENPIKANGKLIVIDGGFSK-AYQSTTG-IAGYTLLYNSFGMQLVS 589 (648)
T ss_pred HHHHHHHHHHhCCCcccCceecCCCcccccCCCCCccCCCeEEEEcCchhh-hhhcccc-cceeEeeecchhhhHhh
Confidence 56678888888887 899999998643 22 2348899888 443 3443333 33333333444444433
No 146
>cd07381 MPP_CapA CapA and related proteins, metallophosphatase domain. CapA is one of three membrane-associated enzymes in Bacillus anthracis that is required for synthesis of gamma-polyglutamic acid (PGA), a major component of the bacterial capsule. The YwtB and PgsA proteins of Bacillus subtilis are closely related to CapA and are also included in this alignment model. CapA belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal
Probab=28.02 E-value=1.1e+02 Score=26.37 Aligned_cols=35 Identities=20% Similarity=0.257 Sum_probs=25.4
Q ss_pred HHHHCCCeEEEeeceeeecceEEecCCeeEEEEecCC
Q 023226 204 FNHTNNLKLIARAHQLVMEGYNWGHEQKVVTIFSAPN 240 (285)
Q Consensus 204 fl~~~~~~~iirgH~~~~~G~~~~~~~~~itifSa~~ 240 (285)
.+-..|+++||-||+.+..++++. ++++| +||-=|
T Consensus 202 ~l~~~G~D~IiG~H~Hv~q~~E~~-~~~~I-~YSlGN 236 (239)
T cd07381 202 ALIDAGADLVIGHHPHVLQGIEIY-KGKLI-FYSLGN 236 (239)
T ss_pred HHHHCCCCEEEcCCCCcCCCeEEE-CCEEE-EEcCCC
Confidence 344569999999999999999874 45543 466533
No 147
>KOG3425 consensus Uncharacterized conserved protein [Function unknown]
Probab=27.67 E-value=1.6e+02 Score=23.37 Aligned_cols=60 Identities=17% Similarity=0.197 Sum_probs=37.3
Q ss_pred HHHHHHHHHhcCCCCCCcEEEeCCccCCCCCh-----HHHHHHHHhccccCCCcEEEe---CCCchhh
Q 023226 38 FHDLAELFRIGGKCPDTNYLFMGDYVDRGYYS-----VETVTLLVSLKVRYPQRITIL---RGNHESR 97 (285)
Q Consensus 38 ~~~l~~il~~~~~~~~~~~vflGD~vDrG~~s-----~evl~~l~~lk~~~p~~v~~l---rGNHE~~ 97 (285)
++.|.+.++..+.....-++|+|+-.|++.+| +.....+..--...|..++++ -||-+.+
T Consensus 12 ~e~~~~~~~~~~n~~~ifvlF~gskd~~tGqSWCPdCV~AEPvi~~alk~ap~~~~~v~v~VG~rp~W 79 (128)
T KOG3425|consen 12 YESFEETLKNVENGKTIFVLFLGSKDDTTGQSWCPDCVAAEPVINEALKHAPEDVHFVHVYVGNRPYW 79 (128)
T ss_pred HHHHHHHHHHHhCCceEEEEEecccCCCCCCcCCchHHHhhHHHHHHHHhCCCceEEEEEEecCCCcc
Confidence 56788888877666565566999999987665 333333322111466665544 5777754
No 148
>PF06490 FleQ: Flagellar regulatory protein FleQ; InterPro: IPR010518 This domain is found at the N terminus of a subset of sigma54-dependent transcriptional activators that are involved in regulation of flagellar motility e.g. FleQ in Pseudomonas aeruginosa. It is clearly related to IPR001789 from INTERPRO, but lacks the conserved aspartate residue that undergoes phosphorylation in the classic two-component system response regulator (IPR001789 from INTERPRO).
Probab=27.46 E-value=98 Score=23.59 Aligned_cols=64 Identities=19% Similarity=0.263 Sum_probs=41.9
Q ss_pred cEEEEecCCCCHHHHHHHHHhcCCCC-----------------CCcEEEeCCccCCCCChHHHHHHHHhccccCCCcEEE
Q 023226 27 PVTICGDIHGQFHDLAELFRIGGKCP-----------------DTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITI 89 (285)
Q Consensus 27 ~i~vvGDiHG~~~~l~~il~~~~~~~-----------------~~~~vflGD~vDrG~~s~evl~~l~~lk~~~p~~v~~ 89 (285)
||.||.|=-....+|..+|+.+|... ...+|.+|+.- +....+..+...+|.--++
T Consensus 1 kILvIddd~~R~~~L~~ILeFlGe~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~-------~~~~~l~~l~~~~~~~Pvl 73 (109)
T PF06490_consen 1 KILVIDDDAERRQRLSTILEFLGEQCEAVSSSDWSQADWSSPWEACAVILGSCS-------KLAELLKELLKWAPHIPVL 73 (109)
T ss_pred CEEEECCcHHHHHhhhhhhhhcCCCeEEecHHHHHHhhhhcCCcEEEEEecCch-------hHHHHHHHHHhhCCCCCEE
Confidence 46677776666777777877666532 11234455542 5566666666677777788
Q ss_pred eCCCchhh
Q 023226 90 LRGNHESR 97 (285)
Q Consensus 90 lrGNHE~~ 97 (285)
+.|.++..
T Consensus 74 llg~~~~~ 81 (109)
T PF06490_consen 74 LLGEHDSP 81 (109)
T ss_pred EECCCCcc
Confidence 88988876
No 149
>COG1692 Calcineurin-like phosphoesterase [General function prediction only]
Probab=26.73 E-value=76 Score=28.37 Aligned_cols=66 Identities=17% Similarity=0.154 Sum_probs=30.0
Q ss_pred CcEEEEecCCCCHH--HHHHHHHhcCCCCC-CcEEEeCCccCCCC-ChHHHHHHHHhccccCCCcEEEeCCCchh
Q 023226 26 SPVTICGDIHGQFH--DLAELFRIGGKCPD-TNYLFMGDYVDRGY-YSVETVTLLVSLKVRYPQRITILRGNHES 96 (285)
Q Consensus 26 ~~i~vvGDiHG~~~--~l~~il~~~~~~~~-~~~vflGD~vDrG~-~s~evl~~l~~lk~~~p~~v~~lrGNHE~ 96 (285)
+|+.++||+=|.-. .+..-|..+...-. +-+|..|.-.-.|. -+.+....|.+.-+ =++-.|||=+
T Consensus 1 mriLfiGDvvGk~Gr~~v~~~Lp~lk~kyk~dfvI~N~ENaa~G~Git~k~y~~l~~~G~-----dviT~GNH~w 70 (266)
T COG1692 1 MRILFIGDVVGKPGRKAVKEHLPQLKSKYKIDFVIVNGENAAGGFGITEKIYKELLEAGA-----DVITLGNHTW 70 (266)
T ss_pred CeEEEEecccCcchHHHHHHHhHHHHHhhcCcEEEEcCccccCCcCCCHHHHHHHHHhCC-----CEEecccccc
Confidence 46667777777543 33333333222111 22334454443332 24445555555432 2355677754
No 150
>KOG3770 consensus Acid sphingomyelinase and PHM5 phosphate metabolism protein [Lipid transport and metabolism]
Probab=22.56 E-value=1.5e+02 Score=29.67 Aligned_cols=63 Identities=21% Similarity=0.238 Sum_probs=36.5
Q ss_pred HHHHHHHHhcCCCCC-Cc-EEEeCCcc--CCCCChHH----HHHHHHhc-cccCCC-cEEEeCCCchhhhhhh
Q 023226 39 HDLAELFRIGGKCPD-TN-YLFMGDYV--DRGYYSVE----TVTLLVSL-KVRYPQ-RITILRGNHESRQITQ 101 (285)
Q Consensus 39 ~~l~~il~~~~~~~~-~~-~vflGD~v--DrG~~s~e----vl~~l~~l-k~~~p~-~v~~lrGNHE~~~~~~ 101 (285)
..+..+|+.++.... -+ ++-.||++ |+++.+.+ ++..+..+ ..-+|+ -|+...||||-.-.|.
T Consensus 195 ~lies~L~~ike~~~~iD~I~wTGD~~~H~~w~~t~~~~l~~~~~l~~~~~e~FpdvpvypalGNhe~~P~N~ 267 (577)
T KOG3770|consen 195 RLIESALDHIKENHKDIDYIIWTGDNVAHDVWAQTEEENLSMLSRLTSLLSEYFPDVPVYPALGNHEIHPVNL 267 (577)
T ss_pred HHHHHHHHHHHhcCCCCCEEEEeCCCCcccchhhhHHHHHHHHHHHHHHHHHhCCCCceeeecccCCCCcHhh
Confidence 455566665543322 34 44699998 45665544 23333222 223554 5899999999876654
No 151
>cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain. Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diver
Probab=22.14 E-value=1.8e+02 Score=25.75 Aligned_cols=27 Identities=15% Similarity=0.129 Sum_probs=21.4
Q ss_pred HHHHHHHHHHCCCeEEEeeceeeecce
Q 023226 198 QDISEQFNHTNNLKLIARAHQLVMEGY 224 (285)
Q Consensus 198 ~~~~~~fl~~~~~~~iirgH~~~~~G~ 224 (285)
.+.+.+.++++++++++.||....+-.
T Consensus 182 ~~~l~~ll~~~~v~~vl~GH~H~y~r~ 208 (294)
T cd00839 182 RAALEDLFYKYGVDLVLSGHVHAYERT 208 (294)
T ss_pred HHHHHHHHHHhCCCEEEEccceeeEee
Confidence 356677888999999999999865433
No 152
>PF05413 Peptidase_C34: Putative closterovirus papain-like endopeptidase; InterPro: IPR008744 RNA-directed RNA polymerase (RdRp) (2.7.7.48 from EC) is an essential protein encoded in the genomes of all RNA containing viruses with no DNA stage [, ]. It catalyses synthesis of the RNA strand complementary to a given RNA template, but the precise molecular mechanism remains unclear. The postulated RNA replication process is a two-step mechanism. First, the initiation step of RNA synthesis begins at or near the 3' end of the RNA template by means of a primer-independent (de novo) mechanism. The de novo initiation consists in the addition of a nucleotide tri-phosphate (NTP) to the 3'-OH of the first initiating NTP. During the following so-called elongation phase, this nucleotidyl transfer reaction is repeated with subsequent NTPs to generate the complementary RNA product []. All the RNA-directed RNA polymerases, and many DNA-directed polymerases, employ a fold whose organisation has been likened to the shape of a right hand with three subdomains termed fingers, palm and thumb []. Only the catalytic palm subdomain, composed of a four-stranded antiparallel beta-sheet with two alpha-helices, is well conserved among all of these enzymes. In RdRp, the palm subdomain comprises three well conserved motifs (A, B and C). Motif A (D-x(4,5)-D) and motif C (GDD) are spatially juxtaposed; the Asp residues of these motifs are implied in the binding of Mg2+ and/or Mn2+. The Asn residue of motif B is involved in selection of ribonucleoside triphosphates over dNTPs and thus determines whether RNA is synthesised rather than DNA []. The domain organisation [] and the 3D structure of the catalytic centre of a wide range of RdPp's, even those with a low overall sequence homology, are conserved. The catalytic centre is formed by several motifs containing a number of conserved amino acid residues. There are 4 superfamilies of viruses that cover all RNA containing viruses with no DNA stage: Viruses containing positive-strand RNA or double-strand RNA, except retroviruses and Birnaviridae: viral RNA-directed RNA polymerases including all positive-strand RNA viruses with no DNA stage, double-strand RNA viruses, and the Cystoviridae, Reoviridae, Hypoviridae, Partitiviridae, Totiviridae families. Mononegavirales (negative-strand RNA viruses with non-segmented genomes). Negative-strand RNA viruses with segmented genomes, i.e. Orthomyxoviruses (including influenza A, B, and C viruses, Thogotoviruses, and the infectious salmon anemia virus), Arenaviruses, Bunyaviruses, Hantaviruses, Nairoviruses, Phleboviruses, Tenuiviruses and Tospoviruses. Birnaviridae family of dsRNA viruses. The RNA-directed RNA polymerases in the first of the above superfamilies can be divided into the following three subgroups: All positive-strand RNA eukaryotic viruses with no DNA stage. All RNA-containing bacteriophages -there are two families of RNA-containing bacteriophages: Leviviridae (positive ssRNA phages) and Cystoviridae (dsRNA phages). Reoviridae family of dsRNA viruses. This signature is found in the RNA-direct RNA polymerase of apple chlorotic leaf spot virus and cherry mottle virus.; GO: 0003723 RNA binding, 0003968 RNA-directed RNA polymerase activity, 0005524 ATP binding, 0019079 viral genome replication
Probab=21.33 E-value=44 Score=24.32 Aligned_cols=8 Identities=63% Similarity=0.974 Sum_probs=6.5
Q ss_pred EEeCCCch
Q 023226 88 TILRGNHE 95 (285)
Q Consensus 88 ~~lrGNHE 95 (285)
.+|||||=
T Consensus 81 ~~LRGNHF 88 (92)
T PF05413_consen 81 MLLRGNHF 88 (92)
T ss_pred eeecccce
Confidence 48999994
No 153
>cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain. Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=21.09 E-value=1.9e+02 Score=25.50 Aligned_cols=48 Identities=6% Similarity=0.004 Sum_probs=30.3
Q ss_pred HHHHHHHHH-CCCeEEEeeceeeecceEEecCCeeEEEEecCCccccCCCcEE
Q 023226 199 DISEQFNHT-NNLKLIARAHQLVMEGYNWGHEQKVVTIFSAPNYCYRCGNMAS 250 (285)
Q Consensus 199 ~~~~~fl~~-~~~~~iirgH~~~~~G~~~~~~~~~itifSa~~y~~~~~n~~a 250 (285)
+.+.+.+++ .++++++.||..... +. ..+| ++.+++|.-|....+..|
T Consensus 205 ~~~~~ll~~~~~V~~v~~GH~H~~~-~~-~~~g--i~~~~~~a~~~~~~~~~~ 253 (267)
T cd07396 205 EEVLSILRAYGCVKACISGHDHEGG-YA-QRHG--IHFLTLEGMVETPPESNA 253 (267)
T ss_pred HHHHHHHHhCCCEEEEEcCCcCCCC-cc-ccCC--eeEEEechhhcCCCCCCc
Confidence 456677777 589999999999754 22 2233 455666666655334444
No 154
>PF12982 DUF3866: Protein of unknown function (DUF3866); InterPro: IPR024479 This family of proteins is currently functionally uncharacterised.
Probab=20.42 E-value=2.4e+02 Score=26.10 Aligned_cols=56 Identities=14% Similarity=0.283 Sum_probs=41.0
Q ss_pred ccCCcEEEEecCCCCHHHHHHHHHhcCCCCCCcEEEeCCccCCCCChHHHHHHHHhcccc
Q 023226 23 PVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVR 82 (285)
Q Consensus 23 ~~~~~i~vvGDiHG~~~~l~~il~~~~~~~~~~~vflGD~vDrG~~s~evl~~l~~lk~~ 82 (285)
.+++.-+||+|+|+.+..+...++... +..++.++ +.|.|.-++..=..+..||..
T Consensus 86 sL~G~PVvV~~LHS~Lp~~~a~~k~~~--p~~riaYI--MtDggALP~~fS~~v~~Lk~~ 141 (320)
T PF12982_consen 86 SLDGMPVVVAELHSMLPPIAAGLKALR--PDARIAYI--MTDGGALPLAFSRTVAELKEK 141 (320)
T ss_pred CCCCCEEEEEechhhHHHHHHHHHHhC--CCCeEEEE--EeCCcCccHHHHHHHHHHHhC
Confidence 345678899999999999999988765 44454443 347888887777777777644
Done!