BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 023227
(285 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2ISQ|A Chain A, Crystal Structure Of O-Acetylserine Sulfhydrylase From
Arabidopsis Thaliana In Complex With C-Terminal Peptide
From Arabidopsis Serine Acetyltransferase
Length = 320
Score = 438 bits (1126), Expect = e-123, Method: Compositional matrix adjust.
Identities = 213/285 (74%), Positives = 236/285 (82%)
Query: 1 MMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITM 60
MMEPCSSVKDRIG+SMISDAE KGLI PGESVLIEPTSGNTG+GLAF AAAK Y+LIITM
Sbjct: 36 MMEPCSSVKDRIGFSMISDAEKKGLIKPGESVLIEPTSGNTGVGLAFTAAAKGYKLIITM 95
Query: 61 PASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIH 120
PASMS ERRIIL AFG ELVLTDPAKGMKGA+ KAEEILAKTPN YMLQQFENPANPKIH
Sbjct: 96 PASMSTERRIILLAFGVELVLTDPAKGMKGAIAKAEEILAKTPNGYMLQQFENPANPKIH 155
Query: 121 YETTGPELWKGSGGRIDALVSXXXXXXXXXXXXKFLKEKNPNIKLYGIEPTESPVLSGGK 180
YETTGPE+WKG+GG+ID VS K+LKE+N N+KLYG+EP ES +LSGGK
Sbjct: 156 YETTGPEIWKGTGGKIDGFVSGIGTGGTITGAGKYLKEQNANVKLYGVEPVESAILSGGK 215
Query: 181 PGPHKIQGIGAGFVPGVLEVNIIDEVVQVSSDEAIETAKLLALKEGLFVXXXXXXXXXXX 240
PGPHKIQGIGAGF+P VL V++IDEVVQVSSDE+I+ A+ LALKEGL V
Sbjct: 216 PGPHKIQGIGAGFIPSVLNVDLIDEVVQVSSDESIDMARQLALKEGLLVGISSGAAAAAA 275
Query: 241 XXXXKRPENAGKLIVVIFPSFGERYLSSVLFESVRKEAESMTFEA 285
+RPENAGKL V IFPSFGERYLS+VLF++ RKEAE+MTFEA
Sbjct: 276 IKLAQRPENAGKLFVAIFPSFGERYLSTVLFDATRKEAEAMTFEA 320
>pdb|1Z7W|A Chain A, Crystal Structure Of O-Acetylserine Sulfhydrylase From
Arabidopsis Thaliana
Length = 322
Score = 438 bits (1126), Expect = e-123, Method: Compositional matrix adjust.
Identities = 213/285 (74%), Positives = 236/285 (82%)
Query: 1 MMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITM 60
MMEPCSSVKDRIG+SMISDAE KGLI PGESVLIEPTSGNTG+GLAF AAAK Y+LIITM
Sbjct: 38 MMEPCSSVKDRIGFSMISDAEKKGLIKPGESVLIEPTSGNTGVGLAFTAAAKGYKLIITM 97
Query: 61 PASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIH 120
PASMS ERRIIL AFG ELVLTDPAKGMKGA+ KAEEILAKTPN YMLQQFENPANPKIH
Sbjct: 98 PASMSTERRIILLAFGVELVLTDPAKGMKGAIAKAEEILAKTPNGYMLQQFENPANPKIH 157
Query: 121 YETTGPELWKGSGGRIDALVSXXXXXXXXXXXXKFLKEKNPNIKLYGIEPTESPVLSGGK 180
YETTGPE+WKG+GG+ID VS K+LKE+N N+KLYG+EP ES +LSGGK
Sbjct: 158 YETTGPEIWKGTGGKIDGFVSGIGTGGTITGAGKYLKEQNANVKLYGVEPVESAILSGGK 217
Query: 181 PGPHKIQGIGAGFVPGVLEVNIIDEVVQVSSDEAIETAKLLALKEGLFVXXXXXXXXXXX 240
PGPHKIQGIGAGF+P VL V++IDEVVQVSSDE+I+ A+ LALKEGL V
Sbjct: 218 PGPHKIQGIGAGFIPSVLNVDLIDEVVQVSSDESIDMARQLALKEGLLVGISSGAAAAAA 277
Query: 241 XXXXKRPENAGKLIVVIFPSFGERYLSSVLFESVRKEAESMTFEA 285
+RPENAGKL V IFPSFGERYLS+VLF++ RKEAE+MTFEA
Sbjct: 278 IKLAQRPENAGKLFVAIFPSFGERYLSTVLFDATRKEAEAMTFEA 322
>pdb|1Z7Y|A Chain A, Crystal Structure Of The Arabidopsis Thaliana
O-Acetylserine Sulfhydrylase K46a Mutant
Length = 322
Score = 436 bits (1121), Expect = e-123, Method: Compositional matrix adjust.
Identities = 212/285 (74%), Positives = 235/285 (82%)
Query: 1 MMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITM 60
MMEPCSSV DRIG+SMISDAE KGLI PGESVLIEPTSGNTG+GLAF AAAK Y+LIITM
Sbjct: 38 MMEPCSSVADRIGFSMISDAEKKGLIKPGESVLIEPTSGNTGVGLAFTAAAKGYKLIITM 97
Query: 61 PASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIH 120
PASMS ERRIIL AFG ELVLTDPAKGMKGA+ KAEEILAKTPN YMLQQFENPANPKIH
Sbjct: 98 PASMSTERRIILLAFGVELVLTDPAKGMKGAIAKAEEILAKTPNGYMLQQFENPANPKIH 157
Query: 121 YETTGPELWKGSGGRIDALVSXXXXXXXXXXXXKFLKEKNPNIKLYGIEPTESPVLSGGK 180
YETTGPE+WKG+GG+ID VS K+LKE+N N+KLYG+EP ES +LSGGK
Sbjct: 158 YETTGPEIWKGTGGKIDGFVSGIGTGGTITGAGKYLKEQNANVKLYGVEPVESAILSGGK 217
Query: 181 PGPHKIQGIGAGFVPGVLEVNIIDEVVQVSSDEAIETAKLLALKEGLFVXXXXXXXXXXX 240
PGPHKIQGIGAGF+P VL V++IDEVVQVSSDE+I+ A+ LALKEGL V
Sbjct: 218 PGPHKIQGIGAGFIPSVLNVDLIDEVVQVSSDESIDMARQLALKEGLLVGISSGAAAAAA 277
Query: 241 XXXXKRPENAGKLIVVIFPSFGERYLSSVLFESVRKEAESMTFEA 285
+RPENAGKL V IFPSFGERYLS+VLF++ RKEAE+MTFEA
Sbjct: 278 IKLAQRPENAGKLFVAIFPSFGERYLSTVLFDATRKEAEAMTFEA 322
>pdb|4AEC|A Chain A, Crystal Structure Of The Arabidopsis Thaliana O-Acetyl-
Serine-(Thiol)-Lyase C
pdb|4AEC|B Chain B, Crystal Structure Of The Arabidopsis Thaliana O-Acetyl-
Serine-(Thiol)-Lyase C
Length = 430
Score = 402 bits (1033), Expect = e-112, Method: Compositional matrix adjust.
Identities = 189/281 (67%), Positives = 227/281 (80%)
Query: 1 MMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITM 60
+MEPC SVKDRIGYSM++DAE KG I+PG+SVL+EPTSGNTGIGLAF+AA++ YRLI+TM
Sbjct: 146 IMEPCCSVKDRIGYSMVTDAEQKGFISPGKSVLVEPTSGNTGIGLAFIAASRGYRLILTM 205
Query: 61 PASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIH 120
PASMS+ERR++L+AFGAELVLTDPAKGM GAVQKAEEIL TP+AYMLQQF+NPANPKIH
Sbjct: 206 PASMSMERRVLLKAFGAELVLTDPAKGMTGAVQKAEEILKNTPDAYMLQQFDNPANPKIH 265
Query: 121 YETTGPELWKGSGGRIDALVSXXXXXXXXXXXXKFLKEKNPNIKLYGIEPTESPVLSGGK 180
YETTGPE+W + G++D V+ +F+KEKNP ++ G+EPTES +LSGGK
Sbjct: 266 YETTGPEIWDDTKGKVDIFVAGIGTGGTITGVGRFIKEKNPKTQVIGVEPTESDILSGGK 325
Query: 181 PGPHKIQGIGAGFVPGVLEVNIIDEVVQVSSDEAIETAKLLALKEGLFVXXXXXXXXXXX 240
PGPHKIQGIGAGF+P L+ I+DEV+ +SS+EAIETAK LALKEGL V
Sbjct: 326 PGPHKIQGIGAGFIPKNLDQKIMDEVIAISSEEAIETAKQLALKEGLMVGISSGAAAAAA 385
Query: 241 XXXXKRPENAGKLIVVIFPSFGERYLSSVLFESVRKEAESM 281
KRPENAGKLI V+FPSFGERYLS+ LF+S+R+E E M
Sbjct: 386 IKVAKRPENAGKLIAVVFPSFGERYLSTPLFQSIREEVEKM 426
>pdb|3VBE|A Chain A, Crystal Structure Of Beta-Cyanoalanine Synthase In Soybean
pdb|3VBE|B Chain B, Crystal Structure Of Beta-Cyanoalanine Synthase In Soybean
pdb|3VBE|C Chain C, Crystal Structure Of Beta-Cyanoalanine Synthase In Soybean
pdb|3VBE|D Chain D, Crystal Structure Of Beta-Cyanoalanine Synthase In Soybean
Length = 344
Score = 347 bits (890), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 158/281 (56%), Positives = 213/281 (75%)
Query: 1 MMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITM 60
MM+P +S+KDR Y+MI+DAE K LITPG++ LIEPTSGN GI +AFMAA K Y++++TM
Sbjct: 58 MMQPTASIKDRPAYAMITDAEEKNLITPGKTTLIEPTSGNMGISMAFMAAMKGYKMVLTM 117
Query: 61 PASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIH 120
P+ SLERR+ +RAFGAEL+LTDPAKGM G V+KA E+L TPNA+MLQQF NPAN ++H
Sbjct: 118 PSYTSLERRVTMRAFGAELILTDPAKGMGGTVKKAYELLENTPNAHMLQQFSNPANTQVH 177
Query: 121 YETTGPELWKGSGGRIDALVSXXXXXXXXXXXXKFLKEKNPNIKLYGIEPTESPVLSGGK 180
+ETTGPE+W+ + G++D V ++LK KNPN+K+YG+EP+ES VL+GGK
Sbjct: 178 FETTGPEIWEDTNGQVDIFVMGIGSGGTVSGVGQYLKSKNPNVKIYGVEPSESNVLNGGK 237
Query: 181 PGPHKIQGIGAGFVPGVLEVNIIDEVVQVSSDEAIETAKLLALKEGLFVXXXXXXXXXXX 240
PGPH I G G GF P +L+++++++V++VSS++A+ A++LALKEGL V
Sbjct: 238 PGPHHITGNGVGFKPDILDLDVMEKVLEVSSEDAVNMARVLALKEGLMVGISSGANTVAA 297
Query: 241 XXXXKRPENAGKLIVVIFPSFGERYLSSVLFESVRKEAESM 281
+ PEN GKLIV + PSFGERYLSSVLF+ +R+EAE+M
Sbjct: 298 LRLAQLPENKGKLIVTVHPSFGERYLSSVLFQELRQEAENM 338
>pdb|3VC3|A Chain A, Crystal Structure Of Beta-Cyanoalanine Synthase K95a
Mutant In Soybean
pdb|3VC3|B Chain B, Crystal Structure Of Beta-Cyanoalanine Synthase K95a
Mutant In Soybean
pdb|3VC3|C Chain C, Crystal Structure Of Beta-Cyanoalanine Synthase K95a
Mutant In Soybean
pdb|3VC3|D Chain D, Crystal Structure Of Beta-Cyanoalanine Synthase K95a
Mutant In Soybean
pdb|3VC3|E Chain E, Crystal Structure Of Beta-Cyanoalanine Synthase K95a
Mutant In Soybean
pdb|3VC3|F Chain F, Crystal Structure Of Beta-Cyanoalanine Synthase K95a
Mutant In Soybean
Length = 344
Score = 345 bits (884), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 157/281 (55%), Positives = 212/281 (75%)
Query: 1 MMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITM 60
MM+P +S+ DR Y+MI+DAE K LITPG++ LIEPTSGN GI +AFMAA K Y++++TM
Sbjct: 58 MMQPTASIADRPAYAMITDAEEKNLITPGKTTLIEPTSGNMGISMAFMAAMKGYKMVLTM 117
Query: 61 PASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIH 120
P+ SLERR+ +RAFGAEL+LTDPAKGM G V+KA E+L TPNA+MLQQF NPAN ++H
Sbjct: 118 PSYTSLERRVTMRAFGAELILTDPAKGMGGTVKKAYELLENTPNAHMLQQFSNPANTQVH 177
Query: 121 YETTGPELWKGSGGRIDALVSXXXXXXXXXXXXKFLKEKNPNIKLYGIEPTESPVLSGGK 180
+ETTGPE+W+ + G++D V ++LK KNPN+K+YG+EP+ES VL+GGK
Sbjct: 178 FETTGPEIWEDTNGQVDIFVMGIGSGGTVSGVGQYLKSKNPNVKIYGVEPSESNVLNGGK 237
Query: 181 PGPHKIQGIGAGFVPGVLEVNIIDEVVQVSSDEAIETAKLLALKEGLFVXXXXXXXXXXX 240
PGPH I G G GF P +L+++++++V++VSS++A+ A++LALKEGL V
Sbjct: 238 PGPHHITGNGVGFKPDILDLDVMEKVLEVSSEDAVNMARVLALKEGLMVGISSGANTVAA 297
Query: 241 XXXXKRPENAGKLIVVIFPSFGERYLSSVLFESVRKEAESM 281
+ PEN GKLIV + PSFGERYLSSVLF+ +R+EAE+M
Sbjct: 298 LRLAQLPENKGKLIVTVHPSFGERYLSSVLFQELRQEAENM 338
>pdb|3RR2|A Chain A, Structure Of A Cysteine Synthase (O-Acetylserine
Sulfhydrylase (Oass)) From Mycobacterium Marinum Atcc
Baa-535 M
Length = 314
Score = 286 bits (731), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 140/269 (52%), Positives = 189/269 (70%), Gaps = 3/269 (1%)
Query: 4 PCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPAS 63
P S+KDRIG +MI AE GLI P +++++EPTSGNTGI LA ++AA+ Y+ ++TMP +
Sbjct: 43 PAGSIKDRIGVAMIDAAEKAGLIKP-DTIILEPTSGNTGIALAMVSAARGYKCVLTMPDT 101
Query: 64 MSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYML-QQFENPANPKIHYE 122
MS+ERR++LRA+GAELVLT A+GM GA+ KAEE LAKT + Y + QQFENPANP +H
Sbjct: 102 MSIERRMLLRAYGAELVLTPGAEGMAGAIAKAEE-LAKTDDRYFIPQQFENPANPAVHAV 160
Query: 123 TTGPELWKGSGGRIDALVSXXXXXXXXXXXXKFLKEKNPNIKLYGIEPTESPVLSGGKPG 182
TT E+W+ + G++D VS + +K++ P+ + +EP SPVLSGG+ G
Sbjct: 161 TTAEEVWRDTDGKVDIFVSGVGTGGTITGVAQVIKQRRPSAQFVAVEPAASPVLSGGQKG 220
Query: 183 PHKIQGIGAGFVPGVLEVNIIDEVVQVSSDEAIETAKLLALKEGLFVXXXXXXXXXXXXX 242
PH IQGIGAGFVP VL++ ++DEV+ V +D+A+E A+ +A +EGL V
Sbjct: 221 PHPIQGIGAGFVPPVLDLALVDEVITVGNDDALELARRMATEEGLLVGISSGAAVWAARE 280
Query: 243 XXKRPENAGKLIVVIFPSFGERYLSSVLF 271
RPENAGKLIVV+ P FGERYLS+VLF
Sbjct: 281 LAHRPENAGKLIVVVLPDFGERYLSTVLF 309
>pdb|2Q3D|A Chain A, 2.2 A Resolution Crystal Structure Of O-acetylserine
Sulfhydrylase (oass) From Mycobacterium Tuberculosis In
Complex With The Reaction Intermediate
Alpha-aminoacrylate
Length = 313
Score = 285 bits (729), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 140/272 (51%), Positives = 188/272 (69%), Gaps = 3/272 (1%)
Query: 4 PCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPAS 63
P +SVKDRIG +M+ AE GLI P +++++EPTSGNTGI LA + AA+ YR ++TMP +
Sbjct: 42 PANSVKDRIGVAMLQAAEQAGLIKP-DTIILEPTSGNTGIALAMVCAARGYRCVLTMPET 100
Query: 64 MSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYML-QQFENPANPKIHYE 122
MSLERR++LRA+GAEL+LT A GM GA+ KAEE LAKT Y + QQFENPANP IH
Sbjct: 101 MSLERRMLLRAYGAELILTPGADGMSGAIAKAEE-LAKTDQRYFVPQQFENPANPAIHRV 159
Query: 123 TTGPELWKGSGGRIDALVSXXXXXXXXXXXXKFLKEKNPNIKLYGIEPTESPVLSGGKPG 182
TT E+W+ + G++D +V+ + +KE+ P+ + +EP SPVLSGG+ G
Sbjct: 160 TTAEEVWRDTDGKVDIVVAGVGTGGTITGVAQVIKERKPSARFVAVEPAASPVLSGGQKG 219
Query: 183 PHKIQGIGAGFVPGVLEVNIIDEVVQVSSDEAIETAKLLALKEGLFVXXXXXXXXXXXXX 242
PH IQGIGAGFVP VL+ +++DE++ V +++A+ A+ LA +EGL V
Sbjct: 220 PHPIQGIGAGFVPPVLDQDLVDEIITVGNEDALNVARRLAREEGLLVGISSGAATVAALQ 279
Query: 243 XXKRPENAGKLIVVIFPSFGERYLSSVLFESV 274
+RPENAGKLIVV+ P FGERYLS+ LF V
Sbjct: 280 VARRPENAGKLIVVVLPDFGERYLSTPLFADV 311
>pdb|4I1Y|A Chain A, The Structure Of Cysteine Synthase From Mycobacterium
Ulcerans Agy99
pdb|4I1Y|B Chain B, The Structure Of Cysteine Synthase From Mycobacterium
Ulcerans Agy99
pdb|4I1Y|C Chain C, The Structure Of Cysteine Synthase From Mycobacterium
Ulcerans Agy99
pdb|4I1Y|D Chain D, The Structure Of Cysteine Synthase From Mycobacterium
Ulcerans Agy99
Length = 314
Score = 283 bits (725), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 139/269 (51%), Positives = 188/269 (69%), Gaps = 3/269 (1%)
Query: 4 PCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPAS 63
P S+KDRIG +MI AE GLI P +++++EPTSGNTGI LA ++AA+ Y+ ++TMP +
Sbjct: 43 PAGSIKDRIGVAMIDAAEKAGLIKP-DTIILEPTSGNTGIALAMVSAARGYKCVLTMPDT 101
Query: 64 MSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYML-QQFENPANPKIHYE 122
MS+ERR++LRA+GAELVLT A+GM GA+ KAEE LAKT + Y + QQFENPANP +H
Sbjct: 102 MSIERRMLLRAYGAELVLTPGAEGMAGAIAKAEE-LAKTDDRYFIPQQFENPANPAVHAV 160
Query: 123 TTGPELWKGSGGRIDALVSXXXXXXXXXXXXKFLKEKNPNIKLYGIEPTESPVLSGGKPG 182
TT E+W+ + G++D VS + +K++ P+ + +EP SPVLSGG+ G
Sbjct: 161 TTAEEVWRDTDGKVDIFVSGVGTGGTITGVAQVIKQRRPSAQFVAVEPAASPVLSGGQKG 220
Query: 183 PHKIQGIGAGFVPGVLEVNIIDEVVQVSSDEAIETAKLLALKEGLFVXXXXXXXXXXXXX 242
PH IQGIGAGFVP VL++ ++DEV+ V +D+A+E A+ +A +EGL
Sbjct: 221 PHPIQGIGAGFVPPVLDLALVDEVITVGNDDALELARRMATEEGLLFGISSGAAVWAARE 280
Query: 243 XXKRPENAGKLIVVIFPSFGERYLSSVLF 271
RPENAGKLIVV+ P FGERYLS+VLF
Sbjct: 281 LAHRPENAGKLIVVVLPDFGERYLSTVLF 309
>pdb|2Q3B|A Chain A, 1.8 A Resolution Crystal Structure Of O-Acetylserine
Sulfhydrylase (Oass) Holoenzyme From Mycobacterium
Tuberculosis
pdb|2Q3C|A Chain A, 2.1 A Resolution Crystal Structure Of O-Acetylserine
Sulfhydrylase (Oass) Holoenzyme From Mycobacterium
Tuberculosis In Complex With The Inhibitory Peptide Dfsi
Length = 313
Score = 283 bits (724), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 139/272 (51%), Positives = 187/272 (68%), Gaps = 3/272 (1%)
Query: 4 PCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPAS 63
P +SV DRIG +M+ AE GLI P +++++EPTSGNTGI LA + AA+ YR ++TMP +
Sbjct: 42 PANSVXDRIGVAMLQAAEQAGLIKP-DTIILEPTSGNTGIALAMVCAARGYRCVLTMPET 100
Query: 64 MSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYML-QQFENPANPKIHYE 122
MSLERR++LRA+GAEL+LT A GM GA+ KAEE LAKT Y + QQFENPANP IH
Sbjct: 101 MSLERRMLLRAYGAELILTPGADGMSGAIAKAEE-LAKTDQRYFVPQQFENPANPAIHRV 159
Query: 123 TTGPELWKGSGGRIDALVSXXXXXXXXXXXXKFLKEKNPNIKLYGIEPTESPVLSGGKPG 182
TT E+W+ + G++D +V+ + +KE+ P+ + +EP SPVLSGG+ G
Sbjct: 160 TTAEEVWRDTDGKVDIVVAGVGTGGTITGVAQVIKERKPSARFVAVEPAASPVLSGGQKG 219
Query: 183 PHKIQGIGAGFVPGVLEVNIIDEVVQVSSDEAIETAKLLALKEGLFVXXXXXXXXXXXXX 242
PH IQGIGAGFVP VL+ +++DE++ V +++A+ A+ LA +EGL V
Sbjct: 220 PHPIQGIGAGFVPPVLDQDLVDEIITVGNEDALNVARRLAREEGLLVGISSGAATVAALQ 279
Query: 243 XXKRPENAGKLIVVIFPSFGERYLSSVLFESV 274
+RPENAGKLIVV+ P FGERYLS+ LF V
Sbjct: 280 VARRPENAGKLIVVVLPDFGERYLSTPLFADV 311
>pdb|3T4P|A Chain A, Crystal Structure Of O-Acetyl Serine Sulfhydrylase From
Leishmania Donovani In Complex With Designed
Tetrapeptide
pdb|3TBH|A Chain A, Crystal Structure Of O-Acetyl Serine Sulfhydrylase In
Complex With Octapeptide Derived From Serine Acetyl
Transferase Of Leishmania Donovani
pdb|3SPX|A Chain A, Crystal Structure Of O-Acetyl Serine Sulfhydrylase From
Leishmania Donovani
Length = 334
Score = 273 bits (698), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 134/278 (48%), Positives = 183/278 (65%)
Query: 4 PCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPAS 63
P +SV DR+G+++ AE +G + PG+S+++E +SGNTG+ LA + A + Y++IITMP S
Sbjct: 46 PMASVXDRLGFAIYDKAEKEGKLIPGKSIVVESSSGNTGVSLAHLGAIRGYKVIITMPES 105
Query: 64 MSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYET 123
MSLERR +LR FGAE++LT A GMKGAV A++I+A PNA + QF N IH ET
Sbjct: 106 MSLERRCLLRIFGAEVILTPAALGMKGAVAMAKKIVAANPNAVLADQFATKYNALIHEET 165
Query: 124 TGPELWKGSGGRIDALVSXXXXXXXXXXXXKFLKEKNPNIKLYGIEPTESPVLSGGKPGP 183
TGPE+W+ + +D ++ + LK+ + ++ +EPTESPVLSGGKPGP
Sbjct: 166 TGPEIWEQTNHNVDCFIAGVGTGGTLTGVARALKKMGSHARIVAVEPTESPVLSGGKPGP 225
Query: 184 HKIQGIGAGFVPGVLEVNIIDEVVQVSSDEAIETAKLLALKEGLFVXXXXXXXXXXXXXX 243
HKIQGIG GFVP VL+ ++IDEV+ V+ D+AIETA L +G+F
Sbjct: 226 HKIQGIGPGFVPDVLDRSLIDEVLCVAGDDAIETALKLTRSDGVFCGFSGGANVYAALKI 285
Query: 244 XKRPENAGKLIVVIFPSFGERYLSSVLFESVRKEAESM 281
+RPE GK IV + PSFGERYLS+ L+ SVR E S+
Sbjct: 286 AERPEMEGKTIVTVIPSFGERYLSTTLYRSVRDEVSSL 323
>pdb|4AIR|A Chain A, Leishmania Major Cysteine Synthase
pdb|4AIR|B Chain B, Leishmania Major Cysteine Synthase
Length = 354
Score = 269 bits (687), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 134/278 (48%), Positives = 180/278 (64%)
Query: 4 PCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPAS 63
P +SVKDR+G+++ AE +G + PG+SV++E +SGNTG+ LA + A + Y++IITMP S
Sbjct: 67 PMASVKDRLGFAIYDKAEKEGKLIPGKSVVVESSSGNTGVSLAHLGAIRGYKVIITMPES 126
Query: 64 MSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYET 123
MSLERR +LR FGAE++LT A GMKGAV A++I+ PNA + QF N IH ET
Sbjct: 127 MSLERRCLLRIFGAEVILTPAALGMKGAVTMAKKIVTANPNAVLADQFATKYNALIHEET 186
Query: 124 TGPELWKGSGGRIDALVSXXXXXXXXXXXXKFLKEKNPNIKLYGIEPTESPVLSGGKPGP 183
TGPE+W+ + +D ++ + LK+ + ++ +EP ESPVLSGGKPG
Sbjct: 187 TGPEIWEQTNHNVDCFIAGVGTGGTLTGVARALKKMGSHARIVAVEPMESPVLSGGKPGA 246
Query: 184 HKIQGIGAGFVPGVLEVNIIDEVVQVSSDEAIETAKLLALKEGLFVXXXXXXXXXXXXXX 243
HKIQGIG GFVP VL+ ++IDEV V+ D+AIETA L +G+F
Sbjct: 247 HKIQGIGPGFVPDVLDRSLIDEVFCVAGDDAIETALKLTRSDGVFCGFSGGANVYAALKI 306
Query: 244 XKRPENAGKLIVVIFPSFGERYLSSVLFESVRKEAESM 281
+RPE GK IV I PSFGERYLS+ L+ SVR E S+
Sbjct: 307 AERPEMEGKTIVTIIPSFGERYLSTALYRSVRDEVSSL 344
>pdb|1OAS|A Chain A, O-Acetylserine Sulfhydrylase From Salmonella Typhimurium
pdb|1OAS|B Chain B, O-Acetylserine Sulfhydrylase From Salmonella Typhimurium
pdb|1FCJ|A Chain A, Crystal Structure Of Oass Complexed With Chloride And
Sulfate
pdb|1FCJ|B Chain B, Crystal Structure Of Oass Complexed With Chloride And
Sulfate
pdb|1FCJ|C Chain C, Crystal Structure Of Oass Complexed With Chloride And
Sulfate
pdb|1FCJ|D Chain D, Crystal Structure Of Oass Complexed With Chloride And
Sulfate
Length = 322
Score = 258 bits (660), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 137/285 (48%), Positives = 186/285 (65%), Gaps = 10/285 (3%)
Query: 4 PCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPAS 63
P SVK RIG +MI DAE +G++ PG L+EPT+GNTGI LA++AAA+ Y+L +TMP +
Sbjct: 36 PSFSVKCRIGANMIWDAEKRGVLKPGVE-LVEPTNGNTGIALAYVAAARGYKLTLTMPET 94
Query: 64 MSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAY-MLQQFENPANPKIHYE 122
MS+ERR +L+A GA LVLT+ AKGMKGA+QKAEEI+A P Y +LQQF NPANP+IH +
Sbjct: 95 MSIERRKLLKALGANLVLTEGAKGMKGAIQKAEEIVASDPQKYLLLQQFSNPANPEIHEK 154
Query: 123 TTGPELWKGSGGRIDALVSXXXXXXXXXXXXKFLKEKNPNIKL--YGIEPTESPVLSGG- 179
TTGPE+W+ + G++D +S +++K L +EPT+SPV++
Sbjct: 155 TTGPEIWEDTDGQVDVFISGVGTGGTLTGVTRYIKGTKGKTDLITVAVEPTDSPVIAQAL 214
Query: 180 -----KPGPHKIQGIGAGFVPGVLEVNIIDEVVQVSSDEAIETAKLLALKEGLFVXXXXX 234
KPGPHKIQGIGAGF+PG L++ +ID+VV ++++EAI TA+ L +EG+
Sbjct: 215 AGEEIKPGPHKIQGIGAGFIPGNLDLKLIDKVVGITNEEAISTARRLMEEEGILAGISSG 274
Query: 235 XXXXXXXXXXKRPENAGKLIVVIFPSFGERYLSSVLFESVRKEAE 279
+ K IVVI PS GERYLS+ LF + E E
Sbjct: 275 AAVAAALKLQEDESFTNKNIVVILPSSGERYLSTALFADLFTEKE 319
>pdb|1D6S|A Chain A, Crystal Structure Of The K41a Mutant Of O-Acetylserine
Sulfhydrylase Complexed In External Aldimine Linkage
With Methionine
pdb|1D6S|B Chain B, Crystal Structure Of The K41a Mutant Of O-Acetylserine
Sulfhydrylase Complexed In External Aldimine Linkage
With Methionine
Length = 322
Score = 256 bits (655), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 136/285 (47%), Positives = 185/285 (64%), Gaps = 10/285 (3%)
Query: 4 PCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPAS 63
P SV RIG +MI DAE +G++ PG L+EPT+GNTGI LA++AAA+ Y+L +TMP +
Sbjct: 36 PSFSVACRIGANMIWDAEKRGVLKPGVE-LVEPTNGNTGIALAYVAAARGYKLTLTMPET 94
Query: 64 MSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAY-MLQQFENPANPKIHYE 122
MS+ERR +L+A GA LVLT+ AKGMKGA+QKAEEI+A P Y +LQQF NPANP+IH +
Sbjct: 95 MSIERRKLLKALGANLVLTEGAKGMKGAIQKAEEIVASDPQKYLLLQQFSNPANPEIHEK 154
Query: 123 TTGPELWKGSGGRIDALVSXXXXXXXXXXXXKFLKEKNPNIKL--YGIEPTESPVLSGG- 179
TTGPE+W+ + G++D +S +++K L +EPT+SPV++
Sbjct: 155 TTGPEIWEDTDGQVDVFISGVGTGGTLTGVTRYIKGTKGKTDLITVAVEPTDSPVIAQAL 214
Query: 180 -----KPGPHKIQGIGAGFVPGVLEVNIIDEVVQVSSDEAIETAKLLALKEGLFVXXXXX 234
KPGPHKIQGIGAGF+PG L++ +ID+VV ++++EAI TA+ L +EG+
Sbjct: 215 AGEEIKPGPHKIQGIGAGFIPGNLDLKLIDKVVGITNEEAISTARRLMEEEGILAGISSG 274
Query: 235 XXXXXXXXXXKRPENAGKLIVVIFPSFGERYLSSVLFESVRKEAE 279
+ K IVVI PS GERYLS+ LF + E E
Sbjct: 275 AAVAAALKLQEDESFTNKNIVVILPSSGERYLSTALFADLFTEKE 319
>pdb|2EGU|A Chain A, Crystal Structure Of O-Acetylserine Sulfhydrase From
Geobacillus Kaustophilus Hta426
Length = 308
Score = 241 bits (616), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 136/272 (50%), Positives = 180/272 (66%), Gaps = 3/272 (1%)
Query: 1 MMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITM 60
M P SSVKDRI +MI AE G + PG+++ +EPTSGNTGIGLA +AAAK Y+ ++ M
Sbjct: 37 FMNPGSSVKDRIALAMIEAAEKAGKLKPGDTI-VEPTSGNTGIGLAMVAAAKGYKAVLVM 95
Query: 61 PASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIH 120
P +MSLERR +LRA+GAELVLT A+GM+GA+ KAEE L + +M QQF+N ANP+IH
Sbjct: 96 PDTMSLERRNLLRAYGAELVLTPGAQGMRGAIAKAEE-LVREHGYFMPQQFKNEANPEIH 154
Query: 121 YETTGPELWKGSGGRIDALVSXXXXXXXXXXXXKFLKEKNPNIKLYGIEPTESPVLSGGK 180
TTG E+ + G ++DA V+ K L+E PNIK+Y +EP +SPVLSGGK
Sbjct: 155 RLTTGKEIVEQMGDQLDAFVAGVGTGGTITGAGKVLREAYPNIKIYAVEPADSPVLSGGK 214
Query: 181 PGPHKIQGIGAGFVPGVLEVNIIDEVVQVSSDEAIETAKLLALKEGLFVXXXXXXXXXXX 240
PGPHKIQGIGAGFVP +L+ +I D V+ V+++EA A+ A +EG+
Sbjct: 215 PGPHKIQGIGAGFVPDILDTSIYDGVITVTTEEAFAAARRAAREEGILGGISSGAAIHAA 274
Query: 241 XXXXKRPENAGKLIVVIFPSFGERYLSSVLFE 272
K GK ++ I PS GERYLS+ L++
Sbjct: 275 LKVAKE-LGKGKKVLAIIPSNGERYLSTPLYQ 305
>pdb|1Y7L|A Chain A, O-Acetylserine Sulfhydrylase Complex
pdb|3IQG|X Chain X, Structure Of O-Acetylserine Sulfhydrylase In Complex With
Peptide Mnwni
pdb|3IQH|X Chain X, Structure Of O-Acetylserine Sulfhydrylase In Complex With
Peptide Mnydi
pdb|3IQI|X Chain X, Structure Of O-Acetylserine Sulfhydrylase In Complex With
Peptide Mneni
Length = 316
Score = 236 bits (601), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 135/279 (48%), Positives = 178/279 (63%), Gaps = 9/279 (3%)
Query: 4 PCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPAS 63
P SV RIG +M+ AE G +T G+ + ++ TSGNTGI LA++AAA+ Y++ +TMP +
Sbjct: 37 PSYSVXCRIGANMVWQAEKDGTLTKGKEI-VDATSGNTGIALAYVAAARGYKITLTMPET 95
Query: 64 MSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAY-MLQQFENPANPKIHYE 122
MSLER+ +L G LVLT+ AKGMKGA+ KAEEI+A P+ Y ML+QFENPANP+IH E
Sbjct: 96 MSLERKRLLCGLGVNLVLTEGAKGMKGAIAKAEEIVASDPSRYVMLKQFENPANPQIHRE 155
Query: 123 TTGPELWKGSGGRIDALVSXXXXXXXXXXXXKFLK-EKNPNIKLYGIEPTESPVLSGG-- 179
TTGPE+WK + G++D +V+ + +K + I +EP ESPV+S
Sbjct: 156 TTGPEIWKDTDGKVDVVVAGVGTGGSITGISRAIKLDFGKQITSVAVEPVESPVISQTLA 215
Query: 180 ----KPGPHKIQGIGAGFVPGVLEVNIIDEVVQVSSDEAIETAKLLALKEGLFVXXXXXX 235
KPGPHKIQGIGAGF+P L+++IID V V SD A+ TA+ L +EG+
Sbjct: 216 GEEVKPGPHKIQGIGAGFIPKNLDLSIIDRVETVDSDTALATARRLMAEEGILAGISSGA 275
Query: 236 XXXXXXXXXKRPENAGKLIVVIFPSFGERYLSSVLFESV 274
K PE A KLIVVI PS ERYLS+ LFE +
Sbjct: 276 AVAAADRLAKLPEFADKLIVVILPSASERYLSTALFEGI 314
>pdb|1VE1|A Chain A, Crystal Structure Of T.Th. Hb8 O-Acetylserine
Sulfhydrylase
pdb|2ECO|A Chain A, Crystal Structure Of T.Th. Hb8 O-Acetylserine
Sulfhydrylase Complexed With 4-Methylvalerate
pdb|2ECQ|A Chain A, Crystal Structure Of T.Th. Hb8 O-Acetylserine
Sulfhydrylase Complexed With 3-Hydroxylactate
pdb|2EFY|A Chain A, Crystal Structure Of T.Th. Hb8 O-Acetylserine
Sulfhydrylase Complexed With 4-Acetylbutyric Acid
pdb|2EFY|B Chain B, Crystal Structure Of T.Th. Hb8 O-Acetylserine
Sulfhydrylase Complexed With 4-Acetylbutyric Acid
Length = 304
Score = 228 bits (582), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 124/271 (45%), Positives = 172/271 (63%), Gaps = 3/271 (1%)
Query: 2 MEPCSSVKDRIGYSMISDAEAKGLITPGE-SVLIEPTSGNTGIGLAFMAAAKQYRLIITM 60
+ P S+KDR + MI DAE +G++ PG V++EPTSGNTGIGLA +AA++ YRLI+TM
Sbjct: 33 LNPGGSIKDRPAWYMIKDAEERGILRPGSGQVIVEPTSGNTGIGLAMIAASRGYRLILTM 92
Query: 61 PASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIH 120
PA MS ER+ +L+AFGAELVLTDP + M A ++A L + A+M QF+NPAN + H
Sbjct: 93 PAQMSEERKRVLKAFGAELVLTDPERRMLAAREEALR-LKEELGAFMPDQFKNPANVRAH 151
Query: 121 YETTGPELWKGSGGRIDALVSXXXXXXXXXXXXKFLKEKNPNIKLYGIEPTESPVLSGGK 180
YETTGPEL++ GRIDA V ++LKE+ P++K+ +EP S VLSGGK
Sbjct: 152 YETTGPELYEALEGRIDAFVYGSGTGGTITGVGRYLKERIPHVKVIAVEPARSNVLSGGK 211
Query: 181 PGPHKIQGIGAGFVPGVLEVNIIDEVVQVSSDEAIETAKLLALKEGLFVXXXXXXXXXXX 240
G H QG+G GF+P L+++++D V+QV ++A A+ LA +EGLF+
Sbjct: 212 MGQHGFQGMGPGFIPENLDLSLLDGVIQVWEEDAFPLARRLAREEGLFLGMSSGGIVWAA 271
Query: 241 XXXXKRPENAGKLIVVIFPSFGERYLSSVLF 271
R GK + I P G +YLS+ L+
Sbjct: 272 LQVA-RELGPGKRVACISPDGGWKYLSTPLY 301
>pdb|3FCA|A Chain A, Genetic Incorporation Of A Metal-Ion Chelating Amino Acid
Into Proteins As Biophysical Probe
pdb|3FCA|B Chain B, Genetic Incorporation Of A Metal-Ion Chelating Amino Acid
Into Proteins As Biophysical Probe
Length = 291
Score = 209 bits (532), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 123/265 (46%), Positives = 161/265 (60%), Gaps = 6/265 (2%)
Query: 4 PCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPAS 63
P SVKDR MI DAE +GL+ G ++EPTSGN GI +A + A + +R+I+TMP +
Sbjct: 30 PGGSVKDRPALFMILDAEKRGLLKNG---IVEPTSGNMGIAIAMIGAKRGHRVILTMPET 86
Query: 64 MSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYET 123
MS+ERR +L+ GAELVLT GMKGAV+KA EI +T A+ML QFENP N H T
Sbjct: 87 MSVERRKVLKMLGAELVLTPGELGMKGAVEKALEISRET-GAHMLNQFENPYNVYSHQFT 145
Query: 124 TGPELWKGSGGRIDALVSXXXXXXXXXXXXKFLKEKNPN-IKLYGIEPTESPVLSGGKPG 182
TGPE+ K +IDA V+ + LK N +K+ +EP +SPVLSGG+PG
Sbjct: 146 TGPEILKQMDYQIDAFVAGVGTGGTISGVGRVLKGFFGNGVKIVAVEPAKSPVLSGGQPG 205
Query: 183 PHKIQGIGAGFVPGVLEVNIIDEVVQVSSDEAIETAKLLALKEGLFVXXXXXXXXXXXXX 242
H IQGIGAGFVP +L+ ++IDEV+ V +EA E A+ LA KEGL V
Sbjct: 206 KHAIQGIGAGFVPKILDRSVIDEVITVEDEEAYEMARYLAKKEGLLVGISSGANVAAALK 265
Query: 243 XXKRPENAGKLIVVIFPSFGERYLS 267
++ + +V + P ERYLS
Sbjct: 266 VAQKLGPDAR-VVTVAPDHAERYLS 289
>pdb|1O58|A Chain A, Crystal Structure Of O-Acetylserine Sulfhydrylase (Tm0665)
From Thermotoga Maritima At 1.80 A Resolution
pdb|1O58|B Chain B, Crystal Structure Of O-Acetylserine Sulfhydrylase (Tm0665)
From Thermotoga Maritima At 1.80 A Resolution
pdb|1O58|C Chain C, Crystal Structure Of O-Acetylserine Sulfhydrylase (Tm0665)
From Thermotoga Maritima At 1.80 A Resolution
pdb|1O58|D Chain D, Crystal Structure Of O-Acetylserine Sulfhydrylase (Tm0665)
From Thermotoga Maritima At 1.80 A Resolution
Length = 303
Score = 209 bits (532), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 123/265 (46%), Positives = 161/265 (60%), Gaps = 6/265 (2%)
Query: 4 PCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPAS 63
P SVKDR MI DAE +GL+ G ++EPTSGN GI +A + A + +R+I+TMP +
Sbjct: 42 PGGSVKDRPALFMILDAEKRGLLKNG---IVEPTSGNMGIAIAMIGAKRGHRVILTMPET 98
Query: 64 MSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYET 123
MS+ERR +L+ GAELVLT GMKGAV+KA EI +T A+ML QFENP N H T
Sbjct: 99 MSVERRKVLKMLGAELVLTPGELGMKGAVEKALEISRET-GAHMLNQFENPYNVYSHQFT 157
Query: 124 TGPELWKGSGGRIDALVSXXXXXXXXXXXXKFLKEKNPN-IKLYGIEPTESPVLSGGKPG 182
TGPE+ K +IDA V+ + LK N +K+ +EP +SPVLSGG+PG
Sbjct: 158 TGPEILKQMDYQIDAFVAGVGTGGTISGVGRVLKGFFGNGVKIVAVEPAKSPVLSGGQPG 217
Query: 183 PHKIQGIGAGFVPGVLEVNIIDEVVQVSSDEAIETAKLLALKEGLFVXXXXXXXXXXXXX 242
H IQGIGAGFVP +L+ ++IDEV+ V +EA E A+ LA KEGL V
Sbjct: 218 KHAIQGIGAGFVPKILDRSVIDEVITVEDEEAYEMARYLAKKEGLLVGISSGANVAAALK 277
Query: 243 XXKRPENAGKLIVVIFPSFGERYLS 267
++ + +V + P ERYLS
Sbjct: 278 VAQKLGPDAR-VVTVAPDHAERYLS 301
>pdb|3BM5|A Chain A, Crystal Structure Of O-Acetyl-Serine Sulfhydrylase From
Entamoeba Histolytica In Complex With Cysteine
pdb|3BM5|B Chain B, Crystal Structure Of O-Acetyl-Serine Sulfhydrylase From
Entamoeba Histolytica In Complex With Cysteine
Length = 338
Score = 193 bits (491), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 108/270 (40%), Positives = 162/270 (60%), Gaps = 3/270 (1%)
Query: 4 PCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPAS 63
P SSVKDR+G++++ A G + PG + IE TSGNTGI L A YR+ I MP++
Sbjct: 52 PMSSVKDRVGFNIVYQAIKDGRLKPGMEI-IESTSGNTGIALCQAGAVFGYRVNIAMPST 110
Query: 64 MSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYML-QQFENPANPKIHYE 122
MS+ER++I++AFGAEL+LT+ KGM GA+++ +++ + P Y + QF NP N H+
Sbjct: 111 MSVERQMIMKAFGAELILTEGKKGMPGAIEEVNKMIKENPGKYFVANQFGNPDNTAAHHY 170
Query: 123 TTGPELWKGSGGRIDALVSXXXXXXXXXXXXKFLKEKNPNIKLYGIEPTESPVLSGGKPG 182
T E+W+ + G +D +VS + LKEK IK+ +EP ES VL G G
Sbjct: 171 TAN-EIWEDTDGEVDIVVSAVGTSGTVIGVAEKLKEKKKGIKIIAVEPEESAVLEGKAKG 229
Query: 183 PHKIQGIGAGFVPGVLEVNIIDEVVQVSSDEAIETAKLLALKEGLFVXXXXXXXXXXXXX 242
PH IQGIGAGF+P + + +DE++ + + +A + A+ + +G+
Sbjct: 230 PHGIQGIGAGFIPDIYKKEFVDEIIPIKTQDAWKMARAVVKYDGIMCGMSSGAAILAGLK 289
Query: 243 XXKRPENAGKLIVVIFPSFGERYLSSVLFE 272
++PEN GK IV+I PS GERYLS+ L++
Sbjct: 290 EAEKPENEGKTIVIIVPSCGERYLSTDLYK 319
>pdb|2PQM|A Chain A, Crystal Structure Of Cysteine Synthase (Oass) From
Entamoeba Histolytica At 1.86 A Resolution
pdb|2PQM|B Chain B, Crystal Structure Of Cysteine Synthase (Oass) From
Entamoeba Histolytica At 1.86 A Resolution
Length = 343
Score = 193 bits (491), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 108/270 (40%), Positives = 162/270 (60%), Gaps = 3/270 (1%)
Query: 4 PCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPAS 63
P SSVKDR+G++++ A G + PG + IE TSGNTGI L A YR+ I MP++
Sbjct: 53 PMSSVKDRVGFNIVYQAIKDGRLKPGMEI-IESTSGNTGIALCQAGAVFGYRVNIAMPST 111
Query: 64 MSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYML-QQFENPANPKIHYE 122
MS+ER++I++AFGAEL+LT+ KGM GA+++ +++ + P Y + QF NP N H+
Sbjct: 112 MSVERQMIMKAFGAELILTEGKKGMPGAIEEVNKMIKENPGKYFVANQFGNPDNTAAHHY 171
Query: 123 TTGPELWKGSGGRIDALVSXXXXXXXXXXXXKFLKEKNPNIKLYGIEPTESPVLSGGKPG 182
T E+W+ + G +D +VS + LKEK IK+ +EP ES VL G G
Sbjct: 172 TAN-EIWEDTDGEVDIVVSAVGTSGTVIGVAEKLKEKKKGIKIIAVEPEESAVLEGKAKG 230
Query: 183 PHKIQGIGAGFVPGVLEVNIIDEVVQVSSDEAIETAKLLALKEGLFVXXXXXXXXXXXXX 242
PH IQGIGAGF+P + + +DE++ + + +A + A+ + +G+
Sbjct: 231 PHGIQGIGAGFIPDIYKKEFVDEIIPIKTQDAWKMARAVVKYDGIMCGMSSGAAILAGLK 290
Query: 243 XXKRPENAGKLIVVIFPSFGERYLSSVLFE 272
++PEN GK IV+I PS GERYLS+ L++
Sbjct: 291 EAEKPENEGKTIVIIVPSCGERYLSTDLYK 320
>pdb|2BHT|A Chain A, Crystal Structure Of O-Acetylserine Sulfhydrylase B
pdb|2BHT|B Chain B, Crystal Structure Of O-Acetylserine Sulfhydrylase B
pdb|2BHT|C Chain C, Crystal Structure Of O-Acetylserine Sulfhydrylase B
pdb|2BHT|D Chain D, Crystal Structure Of O-Acetylserine Sulfhydrylase B
Length = 303
Score = 187 bits (476), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 104/268 (38%), Positives = 151/268 (56%), Gaps = 11/268 (4%)
Query: 4 PCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPAS 63
P SV DR SMI +AE +G I PG+ VLIE TSGNTGI LA +AA K YR+ + MP +
Sbjct: 36 PAGSVXDRAALSMIVEAEKRGRIKPGD-VLIEATSGNTGIALAMIAALKGYRMKLLMPDN 94
Query: 64 MSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYET 123
MS ERR +RA+GAEL+L +GM+GA A E +A +L QF NP NPK HY T
Sbjct: 95 MSQERRAAMRAYGAELILVTKEQGMEGARDLALE-MANRGEGKLLDQFNNPDNPKAHYTT 153
Query: 124 TGPELWKGSGGRIDALVSXXXXXXXXXXXXKFLKEKNPNIKLYGIEPTESPVLSGGKPGP 183
TGPE+W+ +GGRI VS +F++E++ + + G++P E + G + P
Sbjct: 154 TGPEIWQQTGGRITHFVSSMGTTGTITGVSEFMREQSKPVTIVGLQPEEGSSIPGIRRWP 213
Query: 184 HKIQGIGAGFVPGVLEVNIIDEVVQVSSDEAIETAKLLALKEGLFVXXXXXXXXXXXXXX 243
+ ++PG+ +++DEV+ + +A T + LA++EG+F
Sbjct: 214 TE-------YLPGIFNASLVDEVLDIHQRDAENTMRELAVREGIFCGVSSGGAVAGALRV 266
Query: 244 XKRPENAGKLIVVIFPSFGERYLSSVLF 271
K N ++V I G+RYLS+ +F
Sbjct: 267 AK--ANPDAVVVAIICDRGDRYLSTGVF 292
>pdb|2BHS|A Chain A, Crystal Structure Of Cysteine Synthase B
pdb|2BHS|B Chain B, Crystal Structure Of Cysteine Synthase B
pdb|2BHS|C Chain C, Crystal Structure Of Cysteine Synthase B
pdb|2BHS|D Chain D, Crystal Structure Of Cysteine Synthase B
Length = 303
Score = 187 bits (475), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 104/268 (38%), Positives = 151/268 (56%), Gaps = 11/268 (4%)
Query: 4 PCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPAS 63
P SVKDR SMI +AE +G I PG+ VLIE TSGNTGI LA +AA K YR+ + MP +
Sbjct: 36 PAGSVKDRAALSMIVEAEKRGEIKPGD-VLIEATSGNTGIALAMIAALKGYRMKLLMPDN 94
Query: 64 MSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYET 123
MS ERR +RA+GAEL+L +GM+GA A E +A +L QF NP NP HY T
Sbjct: 95 MSQERRAAMRAYGAELILVTKEQGMEGARDLALE-MANRGEGKLLDQFNNPDNPYAHYTT 153
Query: 124 TGPELWKGSGGRIDALVSXXXXXXXXXXXXKFLKEKNPNIKLYGIEPTESPVLSGGKPGP 183
TGPE+W+ +GGRI VS +F++E++ + + G++P E + G + P
Sbjct: 154 TGPEIWQQTGGRITHFVSSMGTTGTITGVSRFMREQSKPVTIVGLQPEEGSSIPGIRRWP 213
Query: 184 HKIQGIGAGFVPGVLEVNIIDEVVQVSSDEAIETAKLLALKEGLFVXXXXXXXXXXXXXX 243
+ ++PG+ +++DEV+ + +A T + LA++EG+F
Sbjct: 214 TE-------YLPGIFNASLVDEVLDIHQRDAENTMRELAVREGIFCGVSSGGAVAGALRV 266
Query: 244 XKRPENAGKLIVVIFPSFGERYLSSVLF 271
K N ++V I G+RYLS+ +F
Sbjct: 267 AK--ANPDAVVVAIICDRGDRYLSTGVF 292
>pdb|2JC3|A Chain A, Structure Of O-acetylserine Sulfhydrylase B From
Salmonella Typhimurium
pdb|2JC3|B Chain B, Structure Of O-acetylserine Sulfhydrylase B From
Salmonella Typhimurium
pdb|2JC3|C Chain C, Structure Of O-acetylserine Sulfhydrylase B From
Salmonella Typhimurium
pdb|2JC3|D Chain D, Structure Of O-acetylserine Sulfhydrylase B From
Salmonella Typhimurium
pdb|2JC3|E Chain E, Structure Of O-acetylserine Sulfhydrylase B From
Salmonella Typhimurium
pdb|2JC3|F Chain F, Structure Of O-acetylserine Sulfhydrylase B From
Salmonella Typhimurium
pdb|2JC3|G Chain G, Structure Of O-acetylserine Sulfhydrylase B From
Salmonella Typhimurium
pdb|2JC3|H Chain H, Structure Of O-acetylserine Sulfhydrylase B From
Salmonella Typhimurium
Length = 303
Score = 183 bits (465), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 102/268 (38%), Positives = 150/268 (55%), Gaps = 11/268 (4%)
Query: 4 PCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPAS 63
P SVKDR SMI +AE +G I PG+ VLIE TSGNTGI LA +AA K YR+ + MP +
Sbjct: 36 PAGSVKDRAALSMIVEAEKRGEIKPGD-VLIEATSGNTGIALAMIAALKGYRMKLLMPDN 94
Query: 64 MSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYET 123
MS ERR +RA+GAEL+L +GM+GA A +++ +L QF NP NP HY T
Sbjct: 95 MSQERRAAMRAYGAELILVTKEQGMEGARDLALA-MSERGEGKLLDQFNNPDNPYAHYTT 153
Query: 124 TGPELWKGSGGRIDALVSXXXXXXXXXXXXKFLKEKNPNIKLYGIEPTESPVLSGGKPGP 183
TGPE+W+ + GRI VS +FL+E+ + + G++P E + G + P
Sbjct: 154 TGPEIWRQTSGRITHFVSSMGTTGTITGVSRFLREQEKPVTIVGLQPEEGSSIPGIRRWP 213
Query: 184 HKIQGIGAGFVPGVLEVNIIDEVVQVSSDEAIETAKLLALKEGLFVXXXXXXXXXXXXXX 243
A ++PG+ +++DEV+ + ++A T + LA++EG+F
Sbjct: 214 -------AEYMPGIFNASLVDEVLDIHQNDAENTMRELAVREGIFCGVSSGGAVAGALRV 266
Query: 244 XKRPENAGKLIVVIFPSFGERYLSSVLF 271
+ G ++V I G+RYLS+ +F
Sbjct: 267 AR--ATPGAIVVAIICDRGDRYLSTGVF 292
>pdb|2V03|A Chain A, High Resolution Structure And Catalysis Of An O-
Acetylserine Sulfhydrylase
Length = 303
Score = 183 bits (464), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 102/268 (38%), Positives = 149/268 (55%), Gaps = 11/268 (4%)
Query: 4 PCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPAS 63
P SV DR SMI +AE +G I PG+ VLIE TSGNTGI LA +AA K YR+ + MP +
Sbjct: 36 PAGSVXDRAALSMIVEAEKRGEIKPGD-VLIEATSGNTGIALAMIAALKGYRMKLLMPDN 94
Query: 64 MSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYET 123
MS ERR +RA+GAEL+L +GM+GA A E +A +L QF NP NP HY T
Sbjct: 95 MSQERRAAMRAYGAELILVTKEQGMEGARDLALE-MANRGEGKLLDQFNNPDNPYAHYTT 153
Query: 124 TGPELWKGSGGRIDALVSXXXXXXXXXXXXKFLKEKNPNIKLYGIEPTESPVLSGGKPGP 183
TGPE+W+ +GGRI VS +F++E++ + + G++P E + G + P
Sbjct: 154 TGPEIWQQTGGRITHFVSSMGTTGTITGVSRFMREQSKPVTIVGLQPEEGSSIPGIRRWP 213
Query: 184 HKIQGIGAGFVPGVLEVNIIDEVVQVSSDEAIETAKLLALKEGLFVXXXXXXXXXXXXXX 243
+ ++PG+ +++DEV+ + +A T + LA++EG+F
Sbjct: 214 TE-------YLPGIFNASLVDEVLDIHQRDAENTMRELAVREGIFCGVSSGGAVAGALRV 266
Query: 244 XKRPENAGKLIVVIFPSFGERYLSSVLF 271
N ++V I G+RYLS+ +F
Sbjct: 267 AA--ANPDAVVVAIICDRGDRYLSTGVF 292
>pdb|1M54|A Chain A, Cystathionine-Beta Synthase: Reduced Vicinal Thiols
pdb|1M54|B Chain B, Cystathionine-Beta Synthase: Reduced Vicinal Thiols
pdb|1M54|C Chain C, Cystathionine-Beta Synthase: Reduced Vicinal Thiols
pdb|1M54|D Chain D, Cystathionine-Beta Synthase: Reduced Vicinal Thiols
pdb|1M54|E Chain E, Cystathionine-Beta Synthase: Reduced Vicinal Thiols
pdb|1M54|F Chain F, Cystathionine-Beta Synthase: Reduced Vicinal Thiols
Length = 363
Score = 162 bits (409), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 96/273 (35%), Positives = 145/273 (53%), Gaps = 12/273 (4%)
Query: 7 SVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSL 66
SVKDRI MI DAE G + PG+++ IEPTSGNTGIGLA AA + YR II MP MS
Sbjct: 74 SVKDRISLRMIEDAERDGTLKPGDTI-IEPTSGNTGIGLALAAAVRGYRCIIVMPEKMSS 132
Query: 67 ERRIILRAFGAELVLTDPAKGM----KGAVQKAEEILAKTPNAYMLQQFENPANPKIHYE 122
E+ +LRA GAE+V T P + V A + + PN+++L Q+ N +NP HY+
Sbjct: 133 EKVDVLRALGAEIVRT-PTNARFDSPESHVGVAWRLKNEIPNSHILDQYRNASNPLAHYD 191
Query: 123 TTGPELWKGSGGRIDALVSXXXXXXXXXXXXKFLKEKNPNIKLYGIEP-----TESPVLS 177
TT E+ + G++D LV+ + LKEK P ++ G++P E L+
Sbjct: 192 TTADEILQQCDGKLDMLVASVGTGGTITGIARKLKEKCPGCRIIGVDPEGSILAEPEELN 251
Query: 178 GGKPGPHKIQGIGAGFVPGVLEVNIIDEVVQVSSDEAIETAKLLALKEGLFVXXXXXXXX 237
+ ++++GIG F+P VL+ ++D+ + + +EA A++L +EGL
Sbjct: 252 QTEQTTYEVEGIGYDFIPTVLDRTVVDKWFKSNDEEAFTFARMLIAQEGLLCGGSAGSTV 311
Query: 238 XXXXXXXKRPENAGKLIVVIFPSFGERYLSSVL 270
+ + G+ VVI P Y++ L
Sbjct: 312 AVAVKAAQELQE-GQRCVVILPDSVRNYMTKFL 343
>pdb|1JBQ|A Chain A, Structure Of Human Cystathionine Beta-Synthase: A Unique
Pyridoxal 5'- Phosphate Dependent Hemeprotein
pdb|1JBQ|B Chain B, Structure Of Human Cystathionine Beta-Synthase: A Unique
Pyridoxal 5'- Phosphate Dependent Hemeprotein
pdb|1JBQ|C Chain C, Structure Of Human Cystathionine Beta-Synthase: A Unique
Pyridoxal 5'- Phosphate Dependent Hemeprotein
pdb|1JBQ|D Chain D, Structure Of Human Cystathionine Beta-Synthase: A Unique
Pyridoxal 5'- Phosphate Dependent Hemeprotein
pdb|1JBQ|E Chain E, Structure Of Human Cystathionine Beta-Synthase: A Unique
Pyridoxal 5'- Phosphate Dependent Hemeprotein
pdb|1JBQ|F Chain F, Structure Of Human Cystathionine Beta-Synthase: A Unique
Pyridoxal 5'- Phosphate Dependent Hemeprotein
Length = 435
Score = 160 bits (405), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 96/275 (34%), Positives = 146/275 (53%), Gaps = 12/275 (4%)
Query: 7 SVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSL 66
SVKDRI MI DAE G + PG+++ IEPTSGNTGIGLA AA + YR II MP MS
Sbjct: 139 SVKDRISLRMIEDAERDGTLKPGDTI-IEPTSGNTGIGLALAAAVRGYRCIIVMPEKMSS 197
Query: 67 ERRIILRAFGAELVLTDPAKGM----KGAVQKAEEILAKTPNAYMLQQFENPANPKIHYE 122
E+ +LRA GAE+V T P + V A + + PN+++L Q+ N +NP HY+
Sbjct: 198 EKVDVLRALGAEIVRT-PTNARFDSPESHVGVAWRLKNEIPNSHILDQYRNASNPLAHYD 256
Query: 123 TTGPELWKGSGGRIDALVSXXXXXXXXXXXXKFLKEKNPNIKLYGIEP-----TESPVLS 177
TT E+ + G++D LV+ + LKEK P ++ G++P E L+
Sbjct: 257 TTADEILQQCDGKLDMLVASVGTGGTITGIARKLKEKCPGCRIIGVDPEGSILAEPEELN 316
Query: 178 GGKPGPHKIQGIGAGFVPGVLEVNIIDEVVQVSSDEAIETAKLLALKEGLFVXXXXXXXX 237
+ ++++GIG F+P VL+ ++D+ + + +EA A++L +EGL
Sbjct: 317 QTEQTTYEVEGIGYDFIPTVLDRTVVDKWFKSNDEEAFTFARMLIAQEGLLCGGSAGSTV 376
Query: 238 XXXXXXXKRPENAGKLIVVIFPSFGERYLSSVLFE 272
+ + G+ VVI P Y++ L +
Sbjct: 377 AVAVKAAQELQE-GQRCVVILPDSVRNYMTKFLSD 410
>pdb|3DWG|A Chain A, Crystal Structure Of A Sulfur Carrier Protein Complex
Found In The Cysteine Biosynthetic Pathway Of
Mycobacterium Tuberculosis
pdb|3DWG|B Chain B, Crystal Structure Of A Sulfur Carrier Protein Complex
Found In The Cysteine Biosynthetic Pathway Of
Mycobacterium Tuberculosis
Length = 325
Score = 136 bits (342), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 83/225 (36%), Positives = 116/225 (51%), Gaps = 9/225 (4%)
Query: 4 PCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPAS 63
P S+KDR MI AEA GL+ PG ++L EPTSGNTGI LA A K YRLI MP +
Sbjct: 48 PTGSIKDRPAVRMIEQAEADGLLRPGATIL-EPTSGNTGISLAMAARLKGYRLICVMPEN 106
Query: 64 MSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYET 123
S+ERR +L +GA+++ + G AV A+E+ A P+ ML Q+ NPAN HY
Sbjct: 107 TSVERRQLLELYGAQIIFSAAEGGSNTAVATAKELAATNPSWVMLYQYGNPANTDSHYCG 166
Query: 124 TGPELWKGSGGRIDALVSXXXXXXXXXXXXKFLKEKNPNIKLYGIEPTESPVLSGGKPGP 183
TGPEL I V+ +FL+E N+K+ EP G
Sbjct: 167 TGPEL-LADLPEITHFVAGLGTTGTLMGTGRFLREHVANVKIVAAEPRYG-------EGV 218
Query: 184 HKIQGIGAGFVPGVLEVNIIDEVVQVSSDEAIETAKLLALKEGLF 228
+ ++ + GFVP + + I+ V + +A+ + L EG+F
Sbjct: 219 YALRNMDEGFVPELYDPEILTARYSVGAVDAVRRTRELVHTEGIF 263
>pdb|3PC2|A Chain A, Full Length Structure Of Cystathionine Beta-Synthase From
Drosophila
pdb|3PC3|A Chain A, Full Length Structure Of Cystathionine Beta-Synthase From
Drosophila In Complex With Aminoacrylate
pdb|3PC4|A Chain A, Full Length Structure Of Cystathionine Beta-Synthase From
Drosophila In Complex With Serine
Length = 527
Score = 135 bits (339), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 86/282 (30%), Positives = 144/282 (51%), Gaps = 12/282 (4%)
Query: 1 MMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITM 60
+ P SVKDRIGY M+ DAE +GL+ PG ++ IEPTSGNTGIGLA A K Y+ II M
Sbjct: 85 FLNPGGSVKDRIGYRMVQDAEEQGLLKPGYTI-IEPTSGNTGIGLAMACAVKGYKCIIVM 143
Query: 61 PASMSLERRIILRAFGAELVLTDPAKGM----KGAVQKAEEILAKTPNAYMLQQFENPAN 116
P MS E+ LR GA+++ T P + +G + A+++ +TPN+ +L Q+ N N
Sbjct: 144 PEKMSNEKVSALRTLGAKIIRT-PTEAAYDSPEGLIYVAQQLQRETPNSIVLDQYRNAGN 202
Query: 117 PKIHYETTGPELWKGSGGRIDALVSXXXXXXXXXXXXKFLKEKNPNIKLYGIEPTESPV- 175
P HY+ T E+ ++D +V + +KE+ P+ ++ G++P S +
Sbjct: 203 PLAHYDGTAAEILWQLDNKVDMIVVSAGTAGTISGIGRKIKEQVPSCQIVGVDPYGSILA 262
Query: 176 ----LSGGKPGPHKIQGIGAGFVPGVLEVNIIDEVVQVSSDEAIETAKLLALKEGLFVXX 231
L+ ++++GIG F P V + ++D ++ + ++ L +EGL
Sbjct: 263 RPAELNKTDVQFYEVEGIGYDFPPTVFDDTVVDVWTKIGDSDCFPMSRRLNAEEGLLCGG 322
Query: 232 XXXXXXXXXXXXXKRPENAGKLIVVIFPSFGERYLSSVLFES 273
++ + G+ VVI P Y++ + ++
Sbjct: 323 SSGGAMHAALEHARKLKK-GQRCVVILPDGIRNYMTKFVSDN 363
>pdb|3DWI|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cysm, The
Cysteine Synthase B
pdb|3DWI|B Chain B, Crystal Structure Of Mycobacterium Tuberculosis Cysm, The
Cysteine Synthase B
Length = 323
Score = 134 bits (337), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 82/225 (36%), Positives = 115/225 (51%), Gaps = 9/225 (4%)
Query: 4 PCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPAS 63
P S+KDR MI AEA GL+ PG ++L EPTSGNTGI LA A K YRLI MP +
Sbjct: 46 PTGSIKDRPAVRMIEQAEADGLLRPGATIL-EPTSGNTGISLAMAARLKGYRLICVMPEN 104
Query: 64 MSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYET 123
S+ERR +L +GA+++ + G AV A+E+ A P+ ML Q+ NPAN HY
Sbjct: 105 TSVERRQLLELYGAQIIFSAAEGGSNTAVATAKELAATNPSWVMLYQYGNPANTDSHYCG 164
Query: 124 TGPELWKGSGGRIDALVSXXXXXXXXXXXXKFLKEKNPNIKLYGIEPTESPVLSGGKPGP 183
TGPEL I V+ +FL+E N+ + EP G
Sbjct: 165 TGPEL-LADLPEITHFVAGLGTTGTLMGTGRFLREHVANVAIVAAEPRYG-------EGV 216
Query: 184 HKIQGIGAGFVPGVLEVNIIDEVVQVSSDEAIETAKLLALKEGLF 228
+ ++ + GFVP + + I+ V + +A+ + L EG+F
Sbjct: 217 YALRNMDEGFVPELYDPEILTARYSVGAVDAVRRTRELVHTEGIF 261
>pdb|3DKI|A Chain A, 2.1 A X-Ray Structure Of Cysm (Rv1336) From Mycobacterium
Tuberculosis An O-Phosphoserine Dependent Cysteine
Synthase
pdb|3DKI|B Chain B, 2.1 A X-Ray Structure Of Cysm (Rv1336) From Mycobacterium
Tuberculosis An O-Phosphoserine Dependent Cysteine
Synthase
pdb|3FGP|A Chain A, 2.05 A Crystal Structure Of Cysm From Mycobacterium
Tuberculosis - Open And Closed Conformations
pdb|3FGP|B Chain B, 2.05 A Crystal Structure Of Cysm From Mycobacterium
Tuberculosis - Open And Closed Conformations
Length = 326
Score = 134 bits (336), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 82/225 (36%), Positives = 115/225 (51%), Gaps = 9/225 (4%)
Query: 4 PCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPAS 63
P S+ DR MI AEA GL+ PG ++L EPTSGNTGI LA A K YRLI MP +
Sbjct: 49 PTGSIXDRPAVRMIEQAEADGLLRPGATIL-EPTSGNTGISLAMAARLKGYRLICVMPEN 107
Query: 64 MSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYET 123
S+ERR +L +GA+++ + G AV A+E+ A P+ ML Q+ NPAN HY
Sbjct: 108 TSVERRQLLELYGAQIIFSAAEGGSNTAVATAKELAATNPSWVMLYQYGNPANTDSHYCG 167
Query: 124 TGPELWKGSGGRIDALVSXXXXXXXXXXXXKFLKEKNPNIKLYGIEPTESPVLSGGKPGP 183
TGPEL I V+ +FL+E N+K+ EP G
Sbjct: 168 TGPEL-LADLPEITHFVAGLGTTGTLMGTGRFLREHVANVKIVAAEPRYG-------EGV 219
Query: 184 HKIQGIGAGFVPGVLEVNIIDEVVQVSSDEAIETAKLLALKEGLF 228
+ ++ + GFVP + + I+ V + +A+ + L EG+F
Sbjct: 220 YALRNMDEGFVPELYDPEILTARYSVGAVDAVRRTRELVHTEGIF 264
>pdb|1WKV|A Chain A, Crystal Structure Of O-Phosphoserine Sulfhydrylase
pdb|1WKV|B Chain B, Crystal Structure Of O-Phosphoserine Sulfhydrylase
pdb|3VSA|A Chain A, Crystal Structure Of O-Phosphoserine Sulfhydrylase Without
Acetate
pdb|3VSA|B Chain B, Crystal Structure Of O-Phosphoserine Sulfhydrylase Without
Acetate
Length = 389
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 114/271 (42%), Gaps = 25/271 (9%)
Query: 7 SVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSL 66
SVKDR +IS + + G S++ + TS N G+ L+ +A YR + +P +
Sbjct: 125 SVKDRPAVEIISRLSRR--VEKG-SLVADATSSNFGVALSAVARLYGYRARVYLPGAAEE 181
Query: 67 ERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQ--QFENPANPKIHYETT 124
+++ R GA+ V+ DP V ++ + N + QF N AN + H T
Sbjct: 182 FGKLLPRLLGAQ-VIVDPEA--PSTVHLLPRVMKDSKNEGFVHVNQFYNDANFEAHMRGT 238
Query: 125 GPELW---KGSGGRIDALVSXXXXXXXXXXXXKFLKEKNPNIKLYGIEPTESPVLSGGKP 181
E++ + G + + +L+ +P+I+ ++P + + P
Sbjct: 239 AREIFVQSRRGGLALRGVAGSLGTSGHMSAAAFYLQSVDPSIRAVLVQPAQGDSI----P 294
Query: 182 GPHKIQGIGAGFVPGVLEVNIID---EVVQVSSDEAIETAKLLALKEGLFVXXXXXXXXX 238
G +++ G+L +N++D + +V+ +EA+E +A +GL +
Sbjct: 295 GIRRVE-------TGMLWINMLDISYTLAEVTLEEAMEAVVEVARSDGLVIGPSGGAAVK 347
Query: 239 XXXXXXKRPENAGKLIVVIFPSFGERYLSSV 269
+ VV+ P G +YLS V
Sbjct: 348 ALAKKAAEGDLEPGDYVVVVPDTGFKYLSLV 378
>pdb|3VSC|A Chain A, Crystal Structure Of The K127a Mutant Of O-Phosphoserine
Sulfhydrylase Complexed With External Schiff Base Of
Pyridoxal 5'-Phosphate With O- Phospho-L-Serine
pdb|3VSC|B Chain B, Crystal Structure Of The K127a Mutant Of O-Phosphoserine
Sulfhydrylase Complexed With External Schiff Base Of
Pyridoxal 5'-Phosphate With O- Phospho-L-Serine
pdb|3VSD|A Chain A, Crystal Structure Of The K127a Mutant Of O-Phosphoserine
Sulfhydrylase Complexed With External Schiff Base Of
Pyridoxal 5'-Phosphate With O- Acetyl-L-Serine
pdb|3VSD|B Chain B, Crystal Structure Of The K127a Mutant Of O-Phosphoserine
Sulfhydrylase Complexed With External Schiff Base Of
Pyridoxal 5'-Phosphate With O- Acetyl-L-Serine
Length = 389
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 113/271 (41%), Gaps = 25/271 (9%)
Query: 7 SVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSL 66
SV DR +IS + + G S++ + TS N G+ L+ +A YR + +P +
Sbjct: 125 SVADRPAVEIISRLSRR--VEKG-SLVADATSSNFGVALSAVARLYGYRARVYLPGAAEE 181
Query: 67 ERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQ--QFENPANPKIHYETT 124
+++ R GA+ V+ DP V ++ + N + QF N AN + H T
Sbjct: 182 FGKLLPRLLGAQ-VIVDPEA--PSTVHLLPRVMKDSKNEGFVHVNQFYNDANFEAHMRGT 238
Query: 125 GPELW---KGSGGRIDALVSXXXXXXXXXXXXKFLKEKNPNIKLYGIEPTESPVLSGGKP 181
E++ + G + + +L+ +P+I+ ++P + + P
Sbjct: 239 AREIFVQSRRGGLALRGVAGSLGTSGHMSAAAFYLQSVDPSIRAVLVQPAQGDSI----P 294
Query: 182 GPHKIQGIGAGFVPGVLEVNIID---EVVQVSSDEAIETAKLLALKEGLFVXXXXXXXXX 238
G +++ G+L +N++D + +V+ +EA+E +A +GL +
Sbjct: 295 GIRRVE-------TGMLWINMLDISYTLAEVTLEEAMEAVVEVARSDGLVIGPSGGAAVK 347
Query: 239 XXXXXXKRPENAGKLIVVIFPSFGERYLSSV 269
+ VV+ P G +YLS V
Sbjct: 348 ALAKKAAEGDLEPGDYVVVVPDTGFKYLSLV 378
>pdb|1TDJ|A Chain A, Threonine Deaminase (Biosynthetic) From E. Coli
Length = 514
Score = 34.7 bits (78), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 12/83 (14%)
Query: 3 EPCSSVKDRIGYSMIS----DAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLII 58
+P S K R Y+M++ + +A G+IT ++GN G+AF +A + +I
Sbjct: 56 QPVHSFKLRGAYAMMAGLTEEQKAHGVITA--------SAGNHAQGVAFSSARLGVKALI 107
Query: 59 TMPASMSLERRIILRAFGAELVL 81
MP + + + +R FG E++L
Sbjct: 108 VMPTATADIKVDAVRGFGGEVLL 130
>pdb|4D9I|A Chain A, Crystal Structure Of Holo Diaminopropionate Ammonia Lyase
From Escherichia Coli
pdb|4D9I|B Chain B, Crystal Structure Of Holo Diaminopropionate Ammonia Lyase
From Escherichia Coli
pdb|4D9N|A Chain A, Crystal Structure Of Diaminopropionate Ammonia Lyase From
Escherichia Coli In Complex With D-Serine
pdb|4D9N|B Chain B, Crystal Structure Of Diaminopropionate Ammonia Lyase From
Escherichia Coli In Complex With D-Serine
Length = 398
Score = 32.3 bits (72), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 6/72 (8%)
Query: 37 TSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKG------MKG 90
T GN G G+A+ A +I MP + ER + GAE ++TD M+
Sbjct: 119 TDGNHGRGVAWAAQQLGQNAVIYMPKGSAQERVDAILNLGAECIVTDMNYDDTVRLTMQH 178
Query: 91 AVQKAEEILAKT 102
A Q E++ T
Sbjct: 179 AQQHGWEVVQDT 190
>pdb|4D9K|A Chain A, Crystal Structure Of Escherichia Coli Diaminopropionate
Ammonia Lyase In Apo Form
pdb|4D9K|D Chain D, Crystal Structure Of Escherichia Coli Diaminopropionate
Ammonia Lyase In Apo Form
pdb|4D9K|B Chain B, Crystal Structure Of Escherichia Coli Diaminopropionate
Ammonia Lyase In Apo Form
pdb|4D9K|C Chain C, Crystal Structure Of Escherichia Coli Diaminopropionate
Ammonia Lyase In Apo Form
Length = 398
Score = 32.3 bits (72), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 6/72 (8%)
Query: 37 TSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKG------MKG 90
T GN G G+A+ A +I MP + ER + GAE ++TD M+
Sbjct: 119 TDGNHGRGVAWAAQQLGQNAVIYMPKGSAQERVDAILNLGAECIVTDMNYDDTVRLTMQH 178
Query: 91 AVQKAEEILAKT 102
A Q E++ T
Sbjct: 179 AQQHGWEVVQDT 190
>pdb|4D9M|A Chain A, Crystal Structure Of Diaminopropionate Ammonia Lyase From
Escherichia Coli In Complex With Aminoacrylate-Plp
Azomethine Reaction Intermediate
pdb|4D9M|B Chain B, Crystal Structure Of Diaminopropionate Ammonia Lyase From
Escherichia Coli In Complex With Aminoacrylate-Plp
Azomethine Reaction Intermediate
Length = 398
Score = 32.3 bits (72), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 6/72 (8%)
Query: 37 TSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKG------MKG 90
T GN G G+A+ A +I MP + ER + GAE ++TD M+
Sbjct: 119 TDGNHGRGVAWAAQQLGQNAVIYMPKGSAQERVDAILNLGAECIVTDMNYDDTVRLTMQH 178
Query: 91 AVQKAEEILAKT 102
A Q E++ T
Sbjct: 179 AQQHGWEVVQDT 190
>pdb|1VE5|A Chain A, Crystal Structure Of T.Th. Hb8 Threonine Deaminase
pdb|1VE5|B Chain B, Crystal Structure Of T.Th. Hb8 Threonine Deaminase
pdb|1VE5|C Chain C, Crystal Structure Of T.Th. Hb8 Threonine Deaminase
pdb|1VE5|D Chain D, Crystal Structure Of T.Th. Hb8 Threonine Deaminase
Length = 311
Score = 32.0 bits (71), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 27/48 (56%)
Query: 33 LIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELV 80
L+ +SGN G+A+ A + ++ MP S ++ RA+GAE+V
Sbjct: 68 LLAVSSGNHAQGVAYAAQVLGVKALVVMPEDASPYKKACARAYGAEVV 115
>pdb|3HMK|A Chain A, Crystal Structure Of Serine Racemase
pdb|3HMK|B Chain B, Crystal Structure Of Serine Racemase
pdb|3L6C|A Chain A, X-Ray Crystal Structure Of Rat Serine Racemase In Complex
Wi Malonate A Potent Inhibitor
pdb|3L6C|B Chain B, X-Ray Crystal Structure Of Rat Serine Racemase In Complex
Wi Malonate A Potent Inhibitor
Length = 339
Score = 31.2 bits (69), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 43/209 (20%), Positives = 87/209 (41%), Gaps = 17/209 (8%)
Query: 33 LIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAV 92
++ +SGN G L + A + I +P + +++ ++A+GA +V ++P+ + V
Sbjct: 79 VVTHSSGNHGQALTYAAKLEGIPAYIVVPQTAPNCKKLAIQAYGASIVYSEPSDESRENV 138
Query: 93 QKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSXXXXXXXXXXX 152
A+ I+ +T ++ + PA I + T +DALV
Sbjct: 139 --AQRIIQET-EGILVHPNQEPA--VIAGQGTIALEVLNQVPLVDALVVPVGGGGMVAGI 193
Query: 153 XKFLKEKNPNIKLYGIEPTESPVLSGGK------PGPHKIQGIGAGFVPGV------LEV 200
+K P++K+Y EP+ + K P H + I G + +
Sbjct: 194 AITIKTLKPSVKVYAAEPSNADDCYQSKLKGELTPNLHPPETIADGVKSSIGLNTWPIIR 253
Query: 201 NIIDEVVQVSSDEAIETAKLLALKEGLFV 229
+++D+V V+ DE +L+ + L +
Sbjct: 254 DLVDDVFTVTEDEIKYATQLVWERMKLLI 282
>pdb|2VZ8|A Chain A, Crystal Structure Of Mammalian Fatty Acid Synthase
pdb|2VZ8|B Chain B, Crystal Structure Of Mammalian Fatty Acid Synthase
pdb|2VZ9|A Chain A, Crystal Structure Of Mammalian Fatty Acid Synthase In
Complex With Nadp
pdb|2VZ9|B Chain B, Crystal Structure Of Mammalian Fatty Acid Synthase In
Complex With Nadp
Length = 2512
Score = 30.4 bits (67), Expect = 1.2, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 7/61 (11%)
Query: 14 YSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILR 73
YS++ +G + PGESVLI SG G +A ++ R+ T+ S E+R L+
Sbjct: 1657 YSLV----VRGRMQPGESVLIHSGSGGVGQAAIAIALSRGCRVFTTVG---SAEKRAYLQ 1709
Query: 74 A 74
A
Sbjct: 1710 A 1710
>pdb|1PQW|A Chain A, Putative Enoyl Reductase Domain Of Polyketide Synthase
pdb|1PQW|B Chain B, Putative Enoyl Reductase Domain Of Polyketide Synthase
Length = 198
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 9/79 (11%)
Query: 24 GLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTD 83
G ++PGE VLI +G G+G+A ++ AK I A +R ++ R G E V
Sbjct: 34 GRLSPGERVLIHSATG--GVGMAAVSIAKMIGARIYTTAGSDAKREMLSR-LGVEYV--- 87
Query: 84 PAKGMKGAVQKAEEILAKT 102
G +V A+EIL T
Sbjct: 88 ---GDSRSVDFADEILELT 103
>pdb|4D9G|A Chain A, Crystal Structure Of Selenomethionine Incorporated Holo
Diaminopropionate Ammonia Lyase From Escherichia Coli
pdb|4D9G|B Chain B, Crystal Structure Of Selenomethionine Incorporated Holo
Diaminopropionate Ammonia Lyase From Escherichia Coli
Length = 398
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 23/47 (48%)
Query: 37 TSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTD 83
T GN G G+A+ A +I P + ER + GAE ++TD
Sbjct: 119 TDGNHGRGVAWAAQQLGQNAVIYXPKGSAQERVDAILNLGAECIVTD 165
>pdb|3L6R|A Chain A, The Structure Of Mammalian Serine Racemase: Evidence For
Conformational Changes Upon Inhibitor Binding
Length = 346
Score = 30.0 bits (66), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/62 (24%), Positives = 32/62 (51%)
Query: 33 LIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAV 92
++ +SGN G L + A + I +P + +++ ++A+GA +V +P+ + V
Sbjct: 79 VVTHSSGNHGQALTYAAKLEGIPAYIVVPQTAPDCKKLAIQAYGASIVYCEPSDESRENV 138
Query: 93 QK 94
K
Sbjct: 139 AK 140
>pdb|3L6B|A Chain A, X-Ray Crystal Structure Of Human Serine Racemase In
Complex Malonate A Potent Inhibitor
Length = 346
Score = 29.3 bits (64), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 15/62 (24%), Positives = 32/62 (51%)
Query: 33 LIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAV 92
++ +SGN G L + A + I +P + +++ ++A+GA +V +P+ + V
Sbjct: 79 VVTHSSGNHGQALTYAAKLEGIPAYIVVPQTAPDCKKLAIQAYGASIVYCEPSDESRENV 138
Query: 93 QK 94
K
Sbjct: 139 AK 140
>pdb|1YB5|A Chain A, Crystal Structure Of Human Zeta-crystallin With Bound Nadp
pdb|1YB5|B Chain B, Crystal Structure Of Human Zeta-crystallin With Bound Nadp
Length = 351
Score = 28.5 bits (62), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Query: 25 LITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILR 73
+ GESVL+ SG G+GLA A+ Y L I A ++I+L+
Sbjct: 167 CVKAGESVLVHGASG--GVGLAACQIARAYGLKILGTAGTEEGQKIVLQ 213
>pdb|3IAU|A Chain A, The Structure Of The Processed Form Of Threonine Deaminase
Isoform 2 From Solanum Lycopersicum
pdb|3IAU|B Chain B, The Structure Of The Processed Form Of Threonine Deaminase
Isoform 2 From Solanum Lycopersicum
Length = 366
Score = 27.7 bits (60), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 67/172 (38%), Gaps = 33/172 (19%)
Query: 11 RIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRI 70
R Y+M+S+ + L + +I ++GN G+A I MP + +
Sbjct: 93 RGAYNMMSNLSREEL----DKGVITASAGNHAQGVALAGQRLNCVAKIVMPTTTPQIKID 148
Query: 71 ILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWK 130
+RA G ++VL K A A E+ K Y + F++P K T G E+ +
Sbjct: 149 AVRALGGDVVLY--GKTFDEAQTHALELSEKDGLKY-IPPFDDPGVIK-GQGTIGTEINR 204
Query: 131 ------------GSGGRIDALVSXXXXXXXXXXXXKFLKEKNPNIKLYGIEP 170
G GG I + + F K+ PN K+ G+EP
Sbjct: 205 QLKDIHAVFIPVGGGGLIAGVAT-------------FFKQIAPNTKIIGVEP 243
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.315 0.134 0.376
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,541,863
Number of Sequences: 62578
Number of extensions: 277111
Number of successful extensions: 520
Number of sequences better than 100.0: 48
Number of HSP's better than 100.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 409
Number of HSP's gapped (non-prelim): 49
length of query: 285
length of database: 14,973,337
effective HSP length: 98
effective length of query: 187
effective length of database: 8,840,693
effective search space: 1653209591
effective search space used: 1653209591
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 51 (24.3 bits)